LOCUS       KCKM01000001             479 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1apa ultra-conserved element locus
            uce-4516, sequence.
ACCESSION   KCKM01000001
VERSION     KCKM01000001.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 479)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 479)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>479
                     /note="ultra-conserved element locus uce-4516"
BASE COUNT          155 a           96 c           91 g          137 t
ORIGIN      
        1 atcgtgtgtt gttttccaat gaaaagaaaa gcattgtttg gaaaaaaaaa cctctccagt
       61 aaacccccac caaaaaaccc acaaggacat tgtatttgaa gtatgtgctt ggtgacatgg
      121 agctgattgc ccaaaggaat caggatacat atatttgtat tattgtacac gtgagtagct
      181 tgaatcatgt actgctcgct ctctttgttt ggattatgca gctcggctgg gcagccatcc
      241 aaaagattca cattaaattc tagctatatt cagcacaaaa gtcatctagc atcagaggat
      301 caaagttaca tcaaccaaca ggcactaagg aattgataag ccactaaaat taggtcatct
      361 cctagcagct gcttttgatg gatgaagcag aatttagcct caggttttct atttaaagat
      421 ctgttacagc atcttttcct gcagctacag tgagaacaca acaaagtata atgcttctg
//
LOCUS       KCKM01000002             538 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17apa ultra-conserved element locus
            uce-5301, sequence.
ACCESSION   KCKM01000002
VERSION     KCKM01000002.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 538)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 538)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..538
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>538
                     /note="ultra-conserved element locus uce-5301"
BASE COUNT          161 a          105 c          113 g          159 t
ORIGIN      
        1 caggggtttc attaaaatgt tctcctctct gcctgaggaa agagcagtga ggacagggtg
       61 agaaggggag gggggaaggg aaatcatctg gcccaaacaa gtttaactaa aaaaaaaatc
      121 caagcaaacc acctgtggtc tccttggaaa ctggcttgca acccctccag ccacctttta
      181 atgaaacccc agagcccctt tattaattta ttaaagaatc tattttctga agattcataa
      241 accgcgcata actcatattc caacacatct ctgctatgct aatagcgcgt gctgccatga
      301 ataattaatt ctttaattag taataattag aggttgttgt ataggtcaaa ccattgggct
      361 gacagcatgc tactgtcaaa atgtcatttg aattaacggg actgtggccc tttctacaca
      421 gaatgatttg ccatttgagg ttggttgccc tctcctctcc aaattttatt tttttagggg
      481 ttggttgttt cagaaggtgt ggaatatgta aaaagaagca tttaaaagca tttatggc
//
LOCUS       KCKM01000003             344 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32apa ultra-conserved element locus
            uce-3360, sequence.
ACCESSION   KCKM01000003
VERSION     KCKM01000003.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 344)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 344)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>344
                     /note="ultra-conserved element locus uce-3360"
BASE COUNT          136 a           58 c           30 g          120 t
ORIGIN      
        1 tttgtttttt taacaaaaat taaactatac accaatctaa gttacagaaa caaaaataac
       61 ctttataaga tcacatgtat aaaacaagaa atgaaatgtg tttttattta aggcaatact
      121 gggctacttc acaaatcacc acctcaaata tatacactgc tccacactac taattttcta
      181 tcacattcac aacggattct ttaataccaa atattgtttt aattctccaa tgtagcaaac
      241 tatttttatt cacatttcca tttttattat ggaatcataa atgctttgta tccaattaaa
      301 agcaatgaaa aatgtagcta taagaaaact attatattta tgaa
//
LOCUS       KCKM01000004            1057 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48apa ultra-conserved element locus
            uce-601, sequence.
ACCESSION   KCKM01000004
VERSION     KCKM01000004.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1057)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1057)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1057
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1057
                     /note="ultra-conserved element locus uce-601"
BASE COUNT          334 a          224 c          196 g          303 t
ORIGIN      
        1 atgctccacc aagtatgtgt acaatttgct agactctcca cttttgtaag acacctcaag
       61 cagtaagtga atatgtaatt tagatgctct ttgtctctcc cagaagagac gcacacagca
      121 atgtaacaac gctagttgta atgcaattta tttggagctt ctgaaatttc agatcacaga
      181 attatataat caatattttg cattactcgg ccacagtgcc ctttcaactg agaacctaac
      241 ttgtgtaatt catacaaaca agagcctcaa gtgcacctag atacatttag cataaaagca
      301 cttatatacg gacaacattc agacacgatc tctatttatt gtctcagctt taagtctcgg
      361 atgcctccat gaaggaccca ctaaagagga caagacagca tgctggccct ttaaaactga
      421 aatgcttgtt tcctttctgt aagaaaagta aatcatgcta tagtgagtgg agctttgaaa
      481 aagcatccat ccattaaagt tcatggatcc tcgtttccag attgtccctc ccctggctgt
      541 gtctcaagtt acagccttgt acaatccaag tctaaataat attcactatg ataaatgaca
      601 ccataactcc gatatccaca atcaatcttt gctttaaaga tacatccatc ttcaataatg
      661 ttgatgggga ttctgtaaaa tgggaaacgt gactgttttt ccgacctcct aacagtgggg
      721 gaaggaagct ctgagtgatg gctgtcagcc cacatctggc tgcaaaaata aattagcctt
      781 atgtagacaa atgaaaggac cagccctgac tagaaaacag ccactcctga gcaatggcta
      841 atttatagga ctcctttctg gaaagttcct agctgaggct acagtctcct tagctatctc
      901 tttaaatgat atctgatgct gtaaataact tcagtgtggt aggaactatg caaagtacaa
      961 agagtgattt ggtgggggaa ggggaggaga caataacttt ctcacattct ttgtacatga
     1021 tcaagatgta aaattcagcc acttaaaaca cacttga
//
LOCUS       KCKM01000005            1161 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 63apa ultra-conserved element locus
            uce-85, sequence.
ACCESSION   KCKM01000005
VERSION     KCKM01000005.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1161)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1161)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1161
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="63apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1161
                     /note="ultra-conserved element locus uce-85"
BASE COUNT          352 a          249 c          215 g          345 t
ORIGIN      
        1 ttcgtttctt ttactctcaa aattcaaaga aagacacagt gtgctcctgc tatttcaatt
       61 tttgtaaggt aatgaaaaat acagaatgta tggtgctaac tgcatgtgat ctgttgtaag
      121 ttttattaac taaaaccaaa gctatttctt gtttctgacc acagctttgt atagcagata
      181 ctgataaaat atgcagaaag tacagagacc aaggcaagat aaccaccaac ttttgttcta
      241 agaatatttt gctctgcaat gtaggtgatt gtgattcagc ataaaaggca gctgtatgcc
      301 attcagtact caccttcatt ggaaaggaaa aggaatgaac atccagcctt ctaacttcgg
      361 tgagattcat ttctgctttc tctctcagtc tttgttaaag aagaaaaaaa tttaatgata
      421 ctattctcat tatacagcta tcagttacat aaaatatctt tgtttagagg cctaataaaa
      481 ctggtcatat aaagaggaaa tgagattttt aatgtaaaat gaagctgaca gtgctcttct
      541 attactatgg tcttattagg gaaaaattct ctgacatctg tttatcccct gcagccaacc
      601 ttgtattcag aatacagtaa ttgattcaca gcatccactg gggatctaac tggctcactt
      661 ttccacaccg cactacacag gtatctccgc agctaattct gaatgtacat ctacatcgtt
      721 atctcctggt gaactgtgac ctgaaacact ttggaggccc agatgaaagt gcttcctcac
      781 ccctccagtg ctgggggtgc aggcgtttct gcagcgcggc aattcaccca ggacacccaa
      841 tcacaaccag cccctttgaa gccccgctca gctgggagac catgaatgat tcatggcttc
      901 tctacacaca ctaaaggggg aagagcaaag ctagtgtgta ttattcagga ctgcatcctc
      961 aataagcctc cgtgttcagc aaattgctac aacgttttct gcttagtcct cacctgtaca
     1021 caacatctct ttttgtgcac aaccttctca ttttagcaaa gataggctga ttatctagga
     1081 gactgtgtta attaacatca gtacaaacaa agaaatccgg tgtccgtgca taaagccagc
     1141 gtttaaagga ttgtaaggaa a
//
LOCUS       KCKM01000006             488 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 79apa ultra-conserved element locus
            uce-7852, sequence.
ACCESSION   KCKM01000006
VERSION     KCKM01000006.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 488)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 488)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..488
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="79apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>488
                     /note="ultra-conserved element locus uce-7852"
BASE COUNT          151 a           95 c           81 g          161 t
ORIGIN      
        1 tttatttttt ttttctcccc tctttcagat gatcctcttg ttttgcatgt gaaaaaaatc
       61 gtctgagatt tacggccctc ccaaatggag ataaagcctt ggcaatgagt tggaaacctg
      121 ttgtaatctg tgatccagga aacaaagagc ctcattaatg cagagacttt ggtgagcctt
      181 tgatgttagc tagcatagca ttcactctca gttccatttg catttaaaca ttcataaaaa
      241 catcatctct gcttcctttg ccttaagcaa tttaggagta aagtatagct tctatttaaa
      301 gaaacccact gtggtgaggc ttagaataca aatatcacat aatcttcaag cagagcaaat
      361 attttatcct acatttctgg tgggcccatt taataatgtt atatttaaga ctcaaaataa
      421 aagatccatc ttattttcat taactttaca ccgcatactc gagtgaaaag agaaaagggg
      481 ccctgtta
//
LOCUS       KCKM01000007            1271 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 95apa ultra-conserved element locus
            uce-7885, sequence.
ACCESSION   KCKM01000007
VERSION     KCKM01000007.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1271)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1271)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1271
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="95apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1271
                     /note="ultra-conserved element locus uce-7885"
BASE COUNT          347 a          279 c          291 g          354 t
ORIGIN      
        1 agacatattg caagttttga tattccttga gcaaattctg gcatttcacc aataatgtcc
       61 tgctttcagt aattaccatt agcattcata acggaaacac atacaagaaa agctaaataa
      121 agatacaaat gagaaggtta aataagcaaa ccaacatgac aaaaatgaca tcagacaacg
      181 tagccaaata ctaggaacta ctaatgaaat tttaactgca gagacaaatt cttctactct
      241 cacatttcag tattttttag agaatggtat tcatagtcca tttttaaaaa tagcctctca
      301 ttttgcactt gaaatattta gcccttctga aaaaaaaccc aaacaaccct tgttgcctca
      361 cgagacaaat aaccgcaaac aaacaaacag aagagagaaa gcaggacgcc gtccccataa
      421 gaagtaaaga gaggaaggta agccttccat aataggcagc atttggaact aaccctatta
      481 gtatcgtccg tacagtcttc tcgtgacgag ccaacagatc ttgtgagtga cttatgctgc
      541 acctgtggag ataacagttg caggctgttt gctctggctg ccatcccttg ccctatgctt
      601 aagccaccct ctgagccctt tgacctcact ctgtcccggc tcacatacat cgagtgtcta
      661 tgagggcgct gctgagaaga aaaaggactg gtataaccta gaccatagga aaaagattca
      721 tgtggagcag agagagagtg ggaatggctt ccatccatgt gatctggcag ttttagctcc
      781 tccattgttt tggagtgtct tgtcgatggt cttcgggtct ccagggtacc ctcgctgcgg
      841 ttattcctcc cggacggact gagcaaagtt ctgttgtcgc catgtcgggg agcagttgga
      901 ctggtaggag agttcaagtc catacagctg gatggaaaat acctgccgct gtttggttct
      961 gcagcttggg ccctggcctc agaaaggttg cccacggatt tcgagtctgt cagaacaccg
     1021 tggctctttg actttgtgcg atacgaagga ctcttcgagg actgcgggat ggtatcgatg
     1081 tagctgtggc gactgtgctt atcgccaggt tgcagtgtcc cggttttgct ttgagaagtt
     1141 tctataaatg agtgccggtt ctgctgagat ctggtgttag acttcaggta ctttgtgccc
     1201 gaactttcgg aactttttgg gtccacatta aaatcaaatt ctgtttttgc ctttgtttcc
     1261 tttgggctga g
//
LOCUS       KCKM01000008             973 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 111apa ultra-conserved element locus
            uce-5110, sequence.
ACCESSION   KCKM01000008
VERSION     KCKM01000008.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 973)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 973)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..973
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="111apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>973
                     /note="ultra-conserved element locus uce-5110"
BASE COUNT          293 a          201 c          168 g          311 t
ORIGIN      
        1 tttctttaga tagttcaaaa aacctttcaa gcatatcacc aattaacttg aaacttgtgt
       61 aaaacttttg gtagtttctg aattttaata atataaattt ttttaagaca tccagcagct
      121 actgcagttc gtaacaagtg tcatgttaac gttttgtaat ggaatactgt tcatttgcat
      181 taacaactgt cacccctgta cacagttttt attcctcagc gtaccttctg atgtacagac
      241 aaagcatctc cacaaaactt atgctaaact aaccactcct gtcattttga agatcctttc
      301 tcattttcaa aagaacacag aaaatgcagc tttatttatg tgccttccat ctaacttctg
      361 ttgctttaac tcacaggctg gtcttcctcc ctaacccctt tgttaacaag cggtggtcct
      421 gtccccctgg gtggcaggcc cacccttctt caccaagctg ctgcccaggg aaatgtcact
      481 ttattatcaa tgctgcttaa tgaagaagga ctggacatta attactcttg tgaagatggc
      541 tattctgcct tgtattctgc tgctacaaac ggacatacag gtaagtgaca ctacgttttg
      601 ttgtggcctc tgtgtgaaat agtgaaggat tattgcctaa gtttttaata ttaaattcag
      661 tcaaatacat gttgtttaaa agtatgaaat tgaaactgaa atatatagat tatatgacag
      721 aagttctagt atagtgtata tataagcaat gcttgtggag gcagaattgt ggaacacaga
      781 aagcattctt gcttgtggta attctgcagg aacatccatt ctaattctcc actcccttcc
      841 tataaaaagc caccagatat aatcacccca tgttccgtga caaactacag atcttttgta
      901 gcaaaggctg cttgaaagaa aaagatttcc tccacaggga gtaagcagga aagaataggt
      961 caccaccagt gtt
//
LOCUS       KCKM01000009             524 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 126apa ultra-conserved element locus
            uce-5144, sequence.
ACCESSION   KCKM01000009
VERSION     KCKM01000009.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 524)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 524)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="126apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>524
                     /note="ultra-conserved element locus uce-5144"
BASE COUNT          122 a          150 c           78 g          174 t
ORIGIN      
        1 cctgttgtgc aaccacagtc cctatctgca gccctgttgc tctgttctgc atgcagtagt
       61 gccccttgca atccctaccg tgaggttaat aaagacctac tgcctgagtt acctttagct
      121 tttataaacc aaaaaataca aacagcacgt aagcagcatt cattacattg cacgccttca
      181 gctgcttatt ggatacacat ccccctccct ccagcatctc tcttttttta atatgttttt
      241 ttttaatttg ttttgatgaa tgagtgacaa ccctgacacc cgattcgctg agattaatag
      301 aaacgacaca atatttacgt cgcgccgacg agcaattatc ctgccatcta tctttgagat
      361 tatctttctg attgaaaact actcatccgt gtaatcggaa ttatttggaa ttagaaggga
      421 atttatggcc cctctcgctc tccctcctat ttgcctctca ctccatcctt cttccccctc
      481 ctttaagagg aatccttcct gccttccttc cttctctcct tcct
//
LOCUS       KCKM01000010            1018 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 142apa ultra-conserved element locus
            uce-2689, sequence.
ACCESSION   KCKM01000010
VERSION     KCKM01000010.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1018)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1018)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1018
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="142apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1018
                     /note="ultra-conserved element locus uce-2689"
BASE COUNT          283 a          185 c          200 g          350 t
ORIGIN      
        1 aaacactgca ggtagcaaag tttgaactga ttctgattca ggtatctcat ttcagaaacc
       61 cttattttgt tggtgaaaaa tagaaagttt gctgacaccc cctttatttc agtatacatt
      121 gtatgattcc attatttata cataaatata tctgctttac aataggtacg gtaggaggag
      181 cttgggtgtg agctcatgtg ggcaagccct gcgacacccc gccttgcacg ttcctttaaa
      241 cgtttgtgtc aactacatct tggaagtcgg tgaaaatcct ccagtgatcc agactgagtg
      301 gattgaatta atggcaactc tgagactaca agctttagtg taattgcttt attgttttgg
      361 aaccaagatg cctacaatcc agttcctgtg caaacatgtt taacgtgtgt taatgtgttt
      421 cccaaccaga ccctctccgc aaaaccctgc ttttcattaa ttgacatcag tagcatggta
      481 cagtatttca aagcactggc caaatataaa ccgtgtttct aatttcctta ctttcctgtg
      541 tttggaatgc caatgttaat ttgttcccat ggaagagtga gagctgccaa ccacagtttt
      601 atataaatgg ctttacagtg cagggctgcc aacattaaat gatacttagg aattttcatg
      661 acattttgta tttaatgctt gtgtgtgtat gtgtgagaga aacagagaga tatatgggat
      721 gttgaacagc gcagccactg atgatcaagg cagatgttgg aagaaattta tcctttgagt
      781 agctgttaat taatgtttct tctcatttaa gatcttttag tatttgtcag atattacgta
      841 gcatgttcct tcttccttga aaaaactact ttgcagtgaa ttttgttgct aactatcctg
      901 acagttctat ggttgctcca acttacccca attttagtta tttattaata gataagcagg
      961 acttttgttt atgctgctat tctgatcatt atgaactaga ctggaagaat gtggtatt
//
LOCUS       KCKM01000011             674 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 157apa ultra-conserved element locus
            uce-5783, sequence.
ACCESSION   KCKM01000011
VERSION     KCKM01000011.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 674)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 674)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="157apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>674
                     /note="ultra-conserved element locus uce-5783"
BASE COUNT          178 a          126 c          154 g          216 t
ORIGIN      
        1 tcacctttta tatgtagctt ggacaatgca cctcaatatg gacttgcatc atcccggcta
       61 ttttggtacc gagcctttga gtggaaattg ccagtggcac cacgctgtgt ggtgtcgtgg
      121 taacgtggca taatgtccgt tgcgagctag ttagactacc aaactcgtgt cacatgttat
      181 ctgaatagac ttgaatttta gtggccaaaa gtggaaaagc tagagcacta atccacgtgc
      241 cttagcttcc tgtaattgat cttatcaatt tttttttaaa gacttactct cttactattg
      301 tgtattttgt tttccttata gccattaaag aaagccctaa ggatgatggg agctccaaat
      361 ctgatatcag ataatttaga ttgtggactt agttacagtg ttatctctta ccttaaaaaa
      421 ctcagccaac aggtagtatt gataaaacct ttgcaattag aagtgcgttg atgatttagt
      481 ttgtggtaat ctcattataa agcagttaat ccctgtgggg gttcatatgg gtgtgcagca
      541 tatatcataa ctgaagagtg gtgagcatct tcgccgcaaa cacgaatgtg tacagcgtgg
      601 ttctgtagcc cgtgattgtg ccttctgtaa gcggtggagg ggagtgcaaa ggagacctcg
      661 tcagctatct tgta
//
LOCUS       KCKM01000012             868 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 172apa ultra-conserved element locus
            uce-2619, sequence.
ACCESSION   KCKM01000012
VERSION     KCKM01000012.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 868)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 868)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..868
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="172apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>868
                     /note="ultra-conserved element locus uce-2619"
BASE COUNT          242 a          191 c          155 g          280 t
ORIGIN      
        1 gtctaaatat atgcctgagg acagctttat ggtaattcta tgtactgccc tcctccacag
       61 tccgttgagt taaaagcgaa agcacaaacg tgaagcaaac atggaaaatg ccattacagt
      121 attttgagaa aagcagcaag ccagtgtcta tgaaaattta atgaccattg agttttttat
      181 tatttcttac tgtgaatcca ggacaaactt ttatttgaca accatatgtc ctttaaaaga
      241 gatccataat tcttcaaata acccagactg ttcttccctc tctcttcccc tctctccctc
      301 tctctcaatc tctctctgtc tcccttttta atgcccacat ctccactatc aggaacaaat
      361 atgatttctg attgaacatc actttatttg ccagttctgt ggtcttttct tatcttgttc
      421 cacacttctc aggctttgtg gttaaattat gtattaaggt caatgtcaaa acacggaaga
      481 tctgtaatct acagggagct cccttttatt cgttattaca gtgaaggctg agcgcaactg
      541 tcagggagct tgggatgtgc tcagcatgga ggcttgctac acagcagggc tctacaaagc
      601 ctctctcctt gttctcccag gacgaaccct tgatagattt acccggataa cccatctcac
      661 tttaaagctc tcttgtctct gcttcaatct gaaagctgtc aagtgcacct atatagtaat
      721 gtcataaatc aaacgtaaaa tgtgtacact ggagacactg cgagtgtcat gtattcactt
      781 gtactttgag atcttctaaa gtaaaatggt gtcagaataa ggaaggctgg gaggaatgtt
      841 tttttcctta aaaatgatgg aatatttg
//
LOCUS       KCKM01000013            1069 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 187apa ultra-conserved element locus
            uce-3329, sequence.
ACCESSION   KCKM01000013
VERSION     KCKM01000013.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1069)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1069)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1069
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="187apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1069
                     /note="ultra-conserved element locus uce-3329"
BASE COUNT          300 a          247 c          274 g          248 t
ORIGIN      
        1 tttttgctag tatgctaagg gatacaaaac gcttctgttg ctctgctcta caactgaatt
       61 gtgccattat tttaattgag agttttgcca gattgaaaaa aaaaatatgc gcatcgtgct
      121 ttattgtagt gaggaaaatt gctgtattat gttagagaat gtactctaaa ttttagcaga
      181 atgcggtgtt gtaactagcc atgtaaaata gtacttaata gagggctttt gcagtgcttg
      241 aacactggac tcatttttaa ccttgttgga tcctttcaga tctcagccac agtggattgg
      301 gagaccatta tgagaattcc cactggggac agcagcccgc tttcaggagt gaaggcaact
      361 gcagctggga taaagtgata atagacagga ctgacaagga agcgtggcct tccattaccg
      421 gagctgagac tgagtctgcc tcagaatgta ctacagacac tgactctgcc tccaactgtg
      481 gctcagagaa cagtagcatg gctacaggga gtgcccaggg caacttcact ggacatacaa
      541 agaaaactaa tggcaataat ggcgccaacg gagcactcgt ccaaagcact tctaaccaga
      601 gtgcccttgg agctggcgga gccaacggca acggcaactc ggccagagtg tggggggtgg
      661 ctgcgggctc cagctctggc ctagctcact gctctgccag tgctggggat ggaaagatgg
      721 acaacatgat gggagacggg agaagtcaga actgctgggg tgcttccaac tcaaatgctg
      781 gcattaatct taaccttaac cctaatgcca atccggctgc ctggcctgta cttggacacg
      841 aaggaactgt gggagcaggc aacccttcca gtatttgcag tccagtcagt gccataggtc
      901 agaacatggg caaccagaac gggaacccga caggcacctt gggtgcttgg ggaaacttgc
      961 tgccgcaaga gagcacagaa ccacaaacgt ccacttctca gaatgtgtct ttcagcgtac
     1021 aacctcagaa ccttaacact gatggaccaa ataacactaa ccccatgaa
//
LOCUS       KCKM01000014            1097 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 202apa ultra-conserved element locus
            uce-7738, sequence.
ACCESSION   KCKM01000014
VERSION     KCKM01000014.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1097)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1097)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1097
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="202apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1097
                     /note="ultra-conserved element locus uce-7738"
BASE COUNT          320 a          192 c          214 g          371 t
ORIGIN      
        1 aagagtaggg tataatatca tctatttcct atagctgctt agtttctaaa tttgatatct
       61 taaaactatt ggagttgcta taatttcaga taaaaggtct tcccacaggc aaaagataat
      121 ttttcataag cttttaaaaa actaataaag tagtaatcta cagtatttta ttatttagaa
      181 ccctagcctt ggggatatga tttgcaagga atttttttat atctcaattc agggtacagt
      241 cgtgagcagc ccatgtgaat atatctgtca gtcttttcta taggtttttt ctttctacca
      301 aatgctgtct acattcagtc catagaaaca ctgccacctc tttaagtggt aatgctccct
      361 gcagagtttt tagcctgtag gagatatgat tagggggtga tagtgttaag cactcctcct
      421 gtatctgctg gcccactctg ataaccttag ggttacaatg catgtctgac aaatacaatt
      481 ccattgtgac tagcgcctta tggcaattta ggaggcttat tcatcatttt acaacagact
      541 tctgtcaggg attttgctta tttgcccttc actggtgtac agtagttgta ggtttatctc
      601 taggagtcca gccctaataa ccaataacaa agtgcttaag ctctaagctt gtgagaaatg
      661 gacttgcatt atactccaac tgcaccttag ctcccgactg ataagacaat gtgtctttga
      721 gagaaggaag gatttgtatg aactgatcct ttacagtacg gtgtatgcat tggtagaaga
      781 tatggggaag tacgttgtgt tctaaccgcc cggatcctag ctttttacat ataaaacaca
      841 tccctgccgt cattaggaat acttccttta aaatatgaaa gtgaagagat atcttgcctt
      901 ggaaattgca ctacaaagtt gtttgtaacg atgatgtggg atttggaaga actgagttac
      961 ttttgatgaa atccccatga ttatggttta aattacacag atttattcaa ggaacaacaa
     1021 aagttttttt attattattc agattcctgc tgggttctgg atattaatta ggtagtggtt
     1081 ccagatgaaa tccagga
//
LOCUS       KCKM01000015             797 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 217apa ultra-conserved element locus
            uce-4111, sequence.
ACCESSION   KCKM01000015
VERSION     KCKM01000015.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 797)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 797)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..797
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="217apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>797
                     /note="ultra-conserved element locus uce-4111"
BASE COUNT          236 a          184 c          121 g          256 t
ORIGIN      
        1 cacagaaaag gtttgatcca aggaagccct gctctgctgt atccctttat ctctccccac
       61 aaaccccctt catgtacctc ctcacctccc ttctcaaagg ccagtggagc tctgtcagca
      121 tcttcactgg tgctctactg gcaccccagg cacttgaagc ggtgcaggca tcaccacatg
      181 caattcggca tcaaatctga acccttcagt gctttctgga acacccaaag ctatcttcag
      241 aatcccaaac aaatacatta attgctttca atttatcagc ctcaaatcat tctatctaat
      301 taccattcat ctcgagtttg tgtttttaat ggtttatggg tattgttggt aatcttttaa
      361 tttctcatta aaaacaatat cttgtacgca ctatgtgtga aaagccctaa tccgataaat
      421 caagcaagag taacacagtt aaaaggaaat cagtggaaca atatttgggt ttatatattt
      481 ctgccagtca atttgtaatt aaaagttgtt actttaaaaa acacagttgt tgctgtgaaa
      541 gccattatca gtcggcattt tcatatgaat actgctttaa ttaattagca aaagtaaata
      601 cattatatat caaaaaccgc tttcgcactg aacccatgcg ttccagaaca aaaggcttaa
      661 taaaccgtac aaaagaggga caaattagct gatcccaccc tcccttttca ggtttagagt
      721 cttttaaagt tctccaaggt tttttcccct cacacttgct ttttttctct aatacattgt
      781 ttgtttttct ttagaag
//
LOCUS       KCKM01000016             873 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 233apa ultra-conserved element locus
            uce-6409, sequence.
ACCESSION   KCKM01000016
VERSION     KCKM01000016.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 873)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 873)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..873
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="233apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>873
                     /note="ultra-conserved element locus uce-6409"
BASE COUNT          289 a          143 c          171 g          270 t
ORIGIN      
        1 aaaaaaaaaa aagtaagttc aatgaactga ataaatgcga taatctaatt ggccacactg
       61 cctggcccaa agtatactag tatggctaaa aagtacgttc ttgtgaaaaa taagtaaatg
      121 aattagaaac tgaatttcca tttcttttgg agtaaaactt agagcaaatg aggaggggga
      181 aaaaatgatg gtagatattt accaaaaacc acagacaata tgaaaggatt aaaatgcttt
      241 aatcagacag aaaaaaaggc tttggctact tgattagggc tgatttccac catctgctta
      301 tacttactga ggatctagcc ctgactgaac actaatttgt gcacttccta gaaattgaaa
      361 tctctcagca agcaaattaa caagagcagg gattcagcaa taatggagct cctcggcttt
      421 tgtttccctc tgacagatgg acagggtgcg ctcaaattga attcagcttt aattgcattg
      481 tgccatttaa aattttatct gctccacaga ttttgtttac aggtttcagg attccaaacc
      541 tttggaaatt ttttcagccc tgggtgaaat aaagagcact ataattctgt gtgactagta
      601 ggtgttcatt accactcttt gccctaaagg gtggcgtgct gaaaaaaggc aaagaattct
      661 attttcaagc cttaaattga tgggtggaga agtacaattt ttctcactgt aaatgctctc
      721 ttgttgagta gctattcata aatagaaata ttgttaaaag ctagaccagg aaataagaag
      781 tgttgaagct gctttgattt tctcttttta ttaaggcatc acaaactttt ctcagctgtg
      841 aagtctgttg cctagagtta taaattttgt gtg
//
LOCUS       KCKM01000017             598 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 249apa ultra-conserved element locus
            uce-2774, sequence.
ACCESSION   KCKM01000017
VERSION     KCKM01000017.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 598)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 598)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="249apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>598
                     /note="ultra-conserved element locus uce-2774"
BASE COUNT          203 a          106 c           93 g          196 t
ORIGIN      
        1 taggtcagtg taacaacaat ttgtctaaac aaaaacaaaa tagctcttca agcttgttga
       61 tcttactttt ttggcctttt ttatgcttca ttgactataa gttcactaag aatgtgtttt
      121 gtaaaaggaa ctgaagtttc tcctagtgga ttagacattt tgcattttag tgactcccac
      181 taaagtttcc attcccccct ccctaaagca gccctttcca acgtcttaaa aaaaaaagat
      241 tgatttttaa gtaatacata tgatattagt ttttccgttt taaaataatc acattattgc
      301 agacatttta atagctgtag aggttgctat gtattaacat gattcatggt ccttgacagc
      361 agtgtctctg aaaatcccac aggaacgcaa aatacaaaac tccacacacg ttcaaatttt
      421 actgcctgca gctaaaagag gggaactgaa aactgttgaa acccttcaac tttaaaagca
      481 ttaatagatg gtcccagggg attaaatcta aatcttaatg tgtaaaaatc aagttaataa
      541 ccacagagat taatatggtt gcatttgatt attgtgataa tgcaaacaat tagtactg
//
LOCUS       KCKM01000018             500 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 264apa ultra-conserved element locus
            uce-5837, sequence.
ACCESSION   KCKM01000018
VERSION     KCKM01000018.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 500)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 500)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..500
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="264apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>500
                     /note="ultra-conserved element locus uce-5837"
BASE COUNT          128 a          101 c          110 g          161 t
ORIGIN      
        1 gccctcactt gtaacatcgc ttctgttccc acagtcctta atggatcagt actttgcccg
       61 tatgcgctcc ttgatgtcaa gtaaggaatt gccagcaagg attcgtttcc tgctgcaggt
      121 tgacttgctg ctcctttttc tcatggaatt gtctggaatc cttttattaa taatttttta
      181 tgttctaagg atactgtgga gttgagagaa cacaactggg ttcctcgcaa agcttttctt
      241 gacaatggac caaagactat caatcaaatc cgtcaagatg cagtaaaagt aagtggtcct
      301 gctgggcttt tgtgtgctat ggtgaatagc gctgctgttt actctgtgtc gcaaaacata
      361 cgctgtgcac ttaggagtag ttctcacagc agagtgtgac aacagggggt taagggttta
      421 aatcaaacgg agttttgaag ttcagggctt cttttaggta ctactccaaa ctgaccaaaa
      481 ttataattcc tattttaaag
//
LOCUS       KCKM01000019             907 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 280apa ultra-conserved element locus
            uce-4751, sequence.
ACCESSION   KCKM01000019
VERSION     KCKM01000019.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 907)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 907)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..907
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="280apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>907
                     /note="ultra-conserved element locus uce-4751"
BASE COUNT          272 a          178 c          174 g          283 t
ORIGIN      
        1 cctttccatc aacaggagct ccgatgttgg ttgaactggt atcagaatca ggcccctcat
       61 ttaattcccc tccttattga tagagagccg tgtctgtgtg cacaccatgg agcatgaatg
      121 tgttgctgtc ccacgaggaa agagactcat tgaataatcc tttttgttta gtattattaa
      181 gtggaccatg gcccttattt tgcttgtttt gctgctcttc ccttgggacg agagaggtgg
      241 ccttgttcat gccactgcct ttcaacatag tgagcaagat ttaaagaaac ataaatccac
      301 tcgagagagg gagggctaca cagcagaact gaataatggg ctttaatagg caaaccaaac
      361 agttaaataa aagatgcaca cggcatgcta aaacttaagg aatgcatatt caatgcaatg
      421 cattattaaa tacaacggtg aacatatggg tgcctacaat taatgtatat aaatagctga
      481 taaaattgct cagtattaga aagctagcgg caaaaatgac ctcatatgtc aagcagacaa
      541 gcaggcagtt accattttct ttgtacacct tacagatgat aaattagttt tatggtctgc
      601 atggggccct tatcacatta cagcaccaag tgtttgataa agaaaaaaaa tgcctcagct
      661 aaaaatcgaa ctgaaatttg gagtccccgt ggacctcatt tttttaacgt aaagaatttt
      721 aacaaacttc cttttggaaa gatttattgc tctgaagaga aatgtatatc tctatcctat
      781 gtgcttttat tacaacttct tctctttcct tcttcttctt cttctttttt ctccccctga
      841 cattagacat aatatgagtc tgctgtaacg gattcattat tgattggggg atttagtggt
      901 tacagca
//
LOCUS       KCKM01000020             782 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 294apa ultra-conserved element locus
            uce-5238, sequence.
ACCESSION   KCKM01000020
VERSION     KCKM01000020.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 782)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 782)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..782
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="294apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>782
                     /note="ultra-conserved element locus uce-5238"
BASE COUNT          262 a          156 c          153 g          211 t
ORIGIN      
        1 attctcacct aacatatcat ttaaattgcc atcaatacac attttggaag aaaagctaag
       61 tatagagatc ttactcccac acattgtttt ctctcctgca ctagtataaa tcaaaacaaa
      121 aaaagattgt atggcaatat aaaaaaggta ggatttctgt aagaccccat cgtgcagcta
      181 taaatgggaa aacatatgaa tgtgttcaat ggagctgaag tttaatatta ctatccaaat
      241 tcctttttat cccactgtca ctgccaccaa aggaggggtt ttatgttgga gataatatga
      301 taccgcagta taagccctcc tcagatttca aacaggtcaa cttgtcaaag ctttttaagg
      361 gagccaatta cattaatttt ccacagcaga gaaatacata tttcatttcc atctcccact
      421 agagatgggg cccagggatt ctgtttcgaa aggctcttat cactaagtaa cattcgtacc
      481 cccaaaggaa cctttggcag tcactgggcc attgatataa ttgaggaagg tatgagctgt
      541 ctgacaccgc catggcattg ctcaatagcg ctgtgcacta agcactcgga acaatgaagc
      601 ttcagcagac ggccacattg tcaataaatt tcaattacac taattgccaa gagttcaatg
      661 agtgcacttt caaaggggag ggggaaggac ggatggaaga ttaaaaaaaa gcctatgcct
      721 actagggcta aagaatagga tgcaataaat aaactgcagt ttctaatggg ggcattaacg
      781 ta
//
LOCUS       KCKM01000021            1030 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 310apa ultra-conserved element locus
            uce-6014, sequence.
ACCESSION   KCKM01000021
VERSION     KCKM01000021.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1030)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1030)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1030
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="310apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1030
                     /note="ultra-conserved element locus uce-6014"
BASE COUNT          290 a          222 c          219 g          299 t
ORIGIN      
        1 agatctaatg gtgagagggt tcaaatatgg agttctaggc ttcctctggt gtattttcag
       61 cgaaactacc acagttctct aaccctgtag ctttcccaaa atgctgctgt ggtgtgtgct
      121 gaagggctag gaggagaaag attcttccct attgcccttc ttcctgtttt catggctgtg
      181 tatccagagg attatctttc cacaagtaaa tgactagaga caagctcacc ccaaatgaat
      241 gttctctcat gtttcaagcg cttgctctct gttcttgctg aatgtttagt tacagcatga
      301 aaaatggata tgtggaatga agacatttcc cctttgacta gcacatttgc agaaggtatg
      361 tcaaggatct gaggcaaggg gtatgggcaa gctttcaaga aagttttttc cccccttctc
      421 ctttgcttgc ttattggaag agcaataaat atcaagcaga caggcccttc tcacagttac
      481 aaagcctacc tgtaactgag ctggataatt agcagccttg aagatgatat atgactttca
      541 ttaccctttg ggactggaga ctaaatgagg acagagctaa ttgccgtgca aagcagtttg
      601 gcatgaatga gaaaaatgca ggcgctgtct cctgccaaaa aagggcccta ttgctgctct
      661 gatctcatgg ctggtttttg ccgcaggagt tcacttggtg tccataaatc atggtctgct
      721 tacagctgaa actgcactga gtcatcaaca tgcaataagc tgagtgacag attccagcct
      781 gactacatta gaacttcaaa cttagtcctc ccccccaaca ctacccatac ttaacagaaa
      841 attaaaccca gactacacag acatgaaggc tgtgagaaac acaaggcttg tttacttgac
      901 aatagttttt aagagtgatg tttccaggaa atatcatcat gcattttgaa agggagaggg
      961 ccacaagtac tgattttata aaatgaccca ctgctatagc atttggtttg tccttcctca
     1021 tataattgct
//
LOCUS       KCKM01000022            1097 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 326apa ultra-conserved element locus
            uce-4036, sequence.
ACCESSION   KCKM01000022
VERSION     KCKM01000022.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1097)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1097)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1097
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="326apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1097
                     /note="ultra-conserved element locus uce-4036"
BASE COUNT          324 a          203 c          237 g          333 t
ORIGIN      
        1 tccacaacag tgtatgactg ccctttggca tggaaggggt taatctagtc aatgttttgt
       61 attattagaa acacgctggc attgaaagag ttaaggaaag ggccttcagg cagtaaatgt
      121 tgaaagatta tcctaatttt attagtggtg agtgtctatg ttgttcttaa catgtcacct
      181 cacttgttta acagaaaact aagctgtacg acgtattgat catccagcaa accaacgtac
      241 tagtgacctg taatctacca agcatttatt ggctttatcc cagtttgggt ccacaaatgt
      301 ggatcaatgc agtgtaatac tgttttagag attagtaatt gtgtagcagg tctgatcaac
      361 cttccccttg ccctggaaag agaaagagtt aaatatatcc aataataaaa ataaactgct
      421 ctaaacatct tacaaaggag aaaaagaaga agctgattta atggtctaat gaggccatct
      481 tccagagact tgttttgtgt agggcttgct ttgacctttc gctttgctca ggagcccaac
      541 gcttcatttt tcacattctt gcaattacgt taacgcttca agcatttctg actccaagtc
      601 agctagcaac accaggcata actcaacact gtgagttttt ctcctctctg tagattcatt
      661 aacaggtcac cggggtccca actgaaattt aaaactgact ggttctgttg ggttagctga
      721 gttacagcaa gggagatggc aggaaaaggg gctgagagaa ggggagggga gagaaaagac
      781 cctggggttt ttgccagaga atatatgtgt aaaaacccta agtggaagat taaaaggtgt
      841 gtgtagcttt atcatccacc cttttctttg gaggggaaaa aacacatctg aaagtcttct
      901 ggggtattgt gttttcctta ttcctttctt cacaaagtga aaacggccac tgcctttacg
      961 tacaaggcta aatgacttct agaattcggc atcagtttgt accacagtga tggatattgt
     1021 gctcccagac tttaattcct atttaatctc tttatgggat atttcaaata atgaatgtgg
     1081 cagattgtgc atgaaaa
//
LOCUS       KCKM01000023             672 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 342apa ultra-conserved element locus
            uce-3046, sequence.
ACCESSION   KCKM01000023
VERSION     KCKM01000023.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 672)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 672)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="342apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>672
                     /note="ultra-conserved element locus uce-3046"
BASE COUNT          203 a          127 c          112 g          230 t
ORIGIN      
        1 tatttgtaag atactgggaa ctccctgatt ttttgtttta aaaatttaca tgaattatta
       61 aaattattta atacatgcta atattctcag acatcaaatt agaaagtcct attatgctgt
      121 aaaaagctgt gataatacaa gttgctctct tacataaata aataaataaa tgaccgatat
      181 tactggaggc tttaagcttt aggaaaaaaa tggaagaagt cttttatcct agtttttaga
      241 gggcatcagc agcttgcttt tatgaaaaag taacagctaa atgcactgca aataatttgc
      301 agtaatccag ttcagtgatt catgtgtctg ctttaatggg tcataattca ggataaagta
      361 actgagtgca gtcagagtgc agacactgct tatgccaggg acagtatctc ttcataaaac
      421 acacctcagc agaagcagtt tgccagcccc ctaataccct ctgatgtttt gatgtcctgc
      481 atatttttcc gattaagttt tgagtgccat gtttttagtt gtatttccac attcattatc
      541 ctcacgtaga cccttcagcg ggtttgccat atatgattat ttttttaatg atgcctttct
      601 ttccacttca gcagtttaat aatctagcac atggctgctt ctcagtactc agcattcacc
      661 tccccagtac ag
//
LOCUS       KCKM01000024             930 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 372apa ultra-conserved element locus
            uce-3942, sequence.
ACCESSION   KCKM01000024
VERSION     KCKM01000024.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 930)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 930)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..930
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="372apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>930
                     /note="ultra-conserved element locus uce-3942"
BASE COUNT          223 a          213 c          209 g          285 t
ORIGIN      
        1 ctttggctaa gatggctttc ttccttctct ttcacagtac cttgctcctg aagttcttca
       61 taagcagccc tatgaccgga ctgtggactg gtggtgcctt ggagcagtcc tgtatgagat
      121 gctttatggc ctggtaagca gcaaatcctt cacgacagat caaactaact tatttgtcct
      181 tccctgtgag aaatcccgtg cccgcctgtt ggcctcactg acctgagtct ctcctttccc
      241 tttcctgcag ccaccattct acagcaggaa cacggcagaa atgtacgaca acatcttgaa
      301 caaacccttg cagctgaagc caaatattac caactcggct agacatctcc tggaaggcct
      361 cttgcagaag gacaggacaa agagacttgg tgccaaggag gactttgtaa gtgcagcgtg
      421 gccggtgcct ggaggcagca tgggaggaga atgactaagg cctactgctt actatagctt
      481 cagtctgatt tttttttttt ccctctctgt aacagatgga gattaagaat cacatcttct
      541 tctccccaat taactgggat gatctcatta ataagaagat tacaccccct ttcaacccaa
      601 atgtggtatg tatcgcttct aattatagaa tatatggaga gtgccttttc ctgccttgtc
      661 tttctggggt gcctgggagc tgggggaact gtctgtttgg cttttggggg agcacagctt
      721 ttccttccct tgtggctatt ctggcaaggt taaaaataag tggtaggtga ctttttttct
      781 gacggacaat ctaaatttag ctttttttgg cctcaacatg cttcatttgc atgtttattt
      841 taaaataatc cccagcatcc ttgttttact gaagggaaag gtaaggtgta ggaagcaagt
      901 agctttccaa gggcagaatt atctttgatt
//
LOCUS       KCKM01000025            1084 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 387apa ultra-conserved element locus
            uce-7865, sequence.
ACCESSION   KCKM01000025
VERSION     KCKM01000025.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1084)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1084)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1084
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="387apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1084
                     /note="ultra-conserved element locus uce-7865"
BASE COUNT          292 a          242 c          255 g          295 t
ORIGIN      
        1 tttataacag cagctaaaca gcatggaggg ctgaagctga ggaggaaaat cctagcaagg
       61 agaaagaatc ttgtgcctga cccacagctg ggcagaaaac ccctacagtg tatctgtatg
      121 gacaggctct gcttgcactc ccaagaaggt gaggtaggag ccagctcgag tgcaggtgac
      181 actaacttgg tgctatcttt cagtcaatac tagccaagcg cagcatctca agaagccatg
      241 gcagctgtgt ctgtccatac agatacaccc cctactctga aaggccctgg agtaatcttt
      301 cctgcaaact gagcaatctt tgccttaccc agctctcggg atgggagggg ggcaaggtgg
      361 gtgtcagtcg gtaggtatgt aagccgtaga gcttcctgtt gttttgtgct tcctatagca
      421 aaaacagtat gcaccttact tgtccagatt acctctacct tccttgttcc tcccagaaat
      481 cacctgctaa gaagctaact aatgcactta gcaagtcttt aagctgtgct tccagccgtg
      541 aacctttgca cccaatgttc cctgaccagc ctgaaaaacc tctaaacctg gctcatattg
      601 tgtaagtatc tgtgtgctat agagaaagta agctttgttg taggcgttgc ttacaccaag
      661 tgtacatgct acagctctga acaaagcagg aggcagctgt ggcttatcaa gctcaatgca
      721 tcacaagtgc aaatttgctg ataggggtat ttagtataaa aacgttctcc tgatgtgact
      781 tctcttgaaa agtcagtggg atatgtgcat ataaccaact actgggaaat gttgttatgt
      841 ccttgttctc ctcgagagaa atacatgcaa tttcatagag tttcagcact ttgggatgtg
      901 ttcatgctta gagcattagt tttgtcatct agagactctc aacttcagtg tatcacaggt
      961 acttcttgat gcaaggcacc agagaaaagt gaagtctgaa ataaatgtgt cctggtttga
     1021 gaggggttag agagcatctg tcagcattta gtggccagcc cagtcctaac ccatgacagt
     1081 ttgt
//
LOCUS       KCKM01000026            1031 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 402apa ultra-conserved element locus
            uce-5699, sequence.
ACCESSION   KCKM01000026
VERSION     KCKM01000026.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1031)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1031)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1031
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="402apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1031
                     /note="ultra-conserved element locus uce-5699"
BASE COUNT          291 a          199 c          198 g          343 t
ORIGIN      
        1 acatcagcct cccggctcgc cacaaactgg ggcagaaact tcagattccc actcctgtct
       61 ccgtctgtag cgtctgctga agccatctac tcaaatgcta aagtggaaac actttccaag
      121 cctgggttag caagtccttt gattgctgtt gttgaatttt gtgggtcctg cactatgctg
      181 acgggtgcgt ttctttaaat cggcaacgtt tttgaagagc catctgcttg cgccatcagc
      241 aatgcatcct tctttccttc aatttcggga gcgctaacac ttccctgcaa actttttgga
      301 agcttgtctc cagctgtaca gtagggacag agcttttgtt taatggaaat gaggcgtatc
      361 tttttcttac agatgcacca ctcactgttg agctttttat gtgtgtttta ggtttccctt
      421 tttatttttt aacttattaa ttctgacaag taacctcttg gttgtgaaca atttgattca
      481 caattcattt ttctgattca aagtgaacac gagtgcccta atcccctaat gggaattaat
      541 tgcatgtttc agtgcttaac tctgatcctt tctcaatccc cactgggaca agtttcttcc
      601 tgaaggatct gtgtgtgtta ttcaaaacac aatctgaaag gtaatgattt ttcttagaaa
      661 agggagtcag actgactgaa tattaatgct ctttttattg tgagggaatg agctgcatcc
      721 aaaaaaattt atgtcataaa gcataaatta tgtagaagta tatctgataa aatagaggtg
      781 gggaaaaatc agtgcggtct tttttcctta agtgaaaaca gtttgccatt aaataaaggc
      841 atgcaccatt tttgtttgga aaattgtatt ctgttacaga gaaaaactgt ttacttcacc
      901 aagaagaaaa atgctttgaa ctgagtattt taaatgacac ggctcttggc cagcaactta
      961 ccataattga gctgatctaa cagtttacta aaataagagt aaatagcaga aaatagatta
     1021 agtttctact t
//
LOCUS       KCKM01000027             748 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 418apa ultra-conserved element locus
            uce-3823, sequence.
ACCESSION   KCKM01000027
VERSION     KCKM01000027.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 748)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 748)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..748
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="418apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>748
                     /note="ultra-conserved element locus uce-3823"
BASE COUNT          265 a          131 c          125 g          227 t
ORIGIN      
        1 atatataagc aaatgcacag ctaaaatgaa aatgcatgga aaattctcta gctctgaaat
       61 cataatcgca gcgcaaattc acatacagca catgggagag aattatcaat tcagaccatt
      121 atttagcaaa ataagaacag acattcattg aaaaatacat gtttacattt tgcattttac
      181 ttcactcttt ttctgaaaag aaaatctata tatattcata ctgtttgttc tttgcttttc
      241 tctgatagtt agaaaacagc tgttctgctg cattgggctt tgactggcta gattgcaagg
      301 ctcaataatc tgtctcggct cagggttaag tgatggaatt catttaaatg ccccagaagt
      361 aatcatccac aaagagtaca ttatttctct tttatgaatt ttcaaacctc atactgatgg
      421 gtggcatgca attaaacctg atcaatatgt aatttaggtg ggctgacatg ttttcaaatt
      481 ctcagaatat agattctttc aatattgcaa gagcttagtg aaatactcag cccttatgcc
      541 aaagcagttt agtacagtaa aacaacaaaa agatgcctat tccggagaca aatgggagag
      601 agattatact tacagacact aacttttcca agaactaaat atcttaataa aaaccagaga
      661 cctttcttgg cagaaaaaaa ataactcttt tgatagaaat taacatgcag atagagaggt
      721 tcaggtcctg cactacaaaa agctgtgg
//
LOCUS       KCKM01000028             579 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 434apa ultra-conserved element locus
            uce-4344, sequence.
ACCESSION   KCKM01000028
VERSION     KCKM01000028.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 579)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 579)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="434apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>579
                     /note="ultra-conserved element locus uce-4344"
BASE COUNT          173 a          125 c           93 g          188 t
ORIGIN      
        1 catcaaattt tagatgaatt atcaaaagaa attggctgga gcacaacaca cgctttttac
       61 tggcctatta tttctcttca tggttactgg atgcacacag acatgaatca aaacacctac
      121 aaataagatg ttttcctctc tacctgtaca cagagaaccg cctgcacgtc tcattttatt
      181 cttccttagt ataaaatgat tgattgattg ctcacagctt gcatgactcc ctgctgccct
      241 agatccatct ccgctcttca cactccatac agttcttgca tcattgactt tctgccagcc
      301 attttgctgc cagtgcatga actgacattt aatgatcttt agatgcagta atgtcacatt
      361 tatcactctt tattggttgt gacagaccta aattcaaatg caaacatgaa atgcagactg
      421 aatccaatcc aaacagtgat atgtttttga gtggcatctg tcaaggcatg ttgagaaaga
      481 agtgaaaaat gacctgtttc ctattatttt agaactataa atagcagggt ttaagtccac
      541 tttaaaatat tttttcccta tagttttgag ggaaacacc
//
LOCUS       KCKM01000029            1011 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 449apa ultra-conserved element locus
            uce-3725, sequence.
ACCESSION   KCKM01000029
VERSION     KCKM01000029.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1011)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1011)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1011
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="449apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1011
                     /note="ultra-conserved element locus uce-3725"
BASE COUNT          339 a          189 c          227 g          256 t
ORIGIN      
        1 tgtatccacc atctagtgtc atataaacat taagatttta ttttcagtga tcctattaat
       61 ataggatgca cacatcttta ataacgcaaa acgcgttgaa aagtttaagt tacaccatct
      121 gagcagtttt cccaggcaat tttgatgaga taaggctctt gcttcaaatt ttttcctttg
      181 tgccccatga cctctacacc ttgcaaatac cgcaaaagcg taagcgatat attctgcagt
      241 cacccgcata ccaagatctt acctaataca ccactaggtt caataggata ctcaaggatt
      301 gatgtagctg gtgccagcgt gtaggggtat tcgtatggtg tgtaaattaa accagcttcg
      361 ggtccaggtg gaactattgc agcagtggga tgaggagttc cgtttggcat gacagcggtt
      421 tgtatttgtc tgatcaaagg cattatggta gggccagctg gcgtaggagt acgcagggca
      481 gctggtggga gaacaggcgc aggcccagta ataatccttg gagcctgggc tgttgctgca
      541 agagaaaagg caagggctgc tacagtaagc aaagaaattc agaggaaagt atggagatag
      601 cagtacaaaa cgtggaaaga atgggaaaaa aggggaaaag taggaaagaa gaaaaataaa
      661 aggaaatcat tagtacatgc gctgatcaca cagtgccaaa gcacaccatt caaatgcaaa
      721 cagctttcca ttttccagtg tgattaagta tgaacatgca aaataaaaaa gccattgtaa
      781 aacagtgagg tagattctca aacaggttac acagcacaaa agctccattt agaccacatt
      841 tcttcattta tgctatcaag actgcatgag actgagatgc atgcaggaga tacaaggaaa
      901 atactgtcat aatcaaataa agagtacaaa atttagtgca actacagagt ccacagatac
      961 tcagttatgc agagctgcca gatgttttat atgccttaca attgtattca a
//
LOCUS       KCKM01000030             326 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 479apa ultra-conserved element locus
            uce-848, sequence.
ACCESSION   KCKM01000030
VERSION     KCKM01000030.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 326)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 326)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="479apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>326
                     /note="ultra-conserved element locus uce-848"
BASE COUNT          109 a           49 c           51 g          117 t
ORIGIN      
        1 gccagtggta cttagtacct cttgtatata ggttattgca aatattgttc tgaaatgctt
       61 aacttcagaa ttacattttt taaagtaaat aattgtttta aatctatttt gtaaagatat
      121 aaaaatacag tagaatttct ggagtacaga ttaaactatt tgcactaaca cacgtgacgt
      181 gcatgattta ataaaataac tttactctcc ctatgcatgt ttgagttgaa tgtcatttga
      241 aaaaaagatt catgctaagt ttcttttgct ctagatattg ccacagttac taggcacaat
      301 gtctgcagca tgtccagtaa tagcaa
//
LOCUS       KCKM01000031             891 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 493apa ultra-conserved element locus
            uce-2746, sequence.
ACCESSION   KCKM01000031
VERSION     KCKM01000031.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 891)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 891)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..891
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="493apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>891
                     /note="ultra-conserved element locus uce-2746"
BASE COUNT          294 a          166 c          136 g          295 t
ORIGIN      
        1 tccatacaag gacaattcct atctataaaa agcctatgta ttatctaaaa caattcagac
       61 tgaaaatctg tagtcttcat agcatttgtt tttaagtatt ttataaatca tgattatttt
      121 agtatctgat ttgtcttaac atctatttag tcattttaca gggcttcttg cttcaattaa
      181 cagcattttt ttattattga ttaaagtagt tgtgaattca tcaacaaagg atagactgta
      241 cagttatacc ctaaacaaaa gctttaaagt agtgggatta tattatgcaa ataattcaaa
      301 aatattttta agcaggcatt acttcagcat ttagatattg gctaaagcag ctttaatatg
      361 caagacagga tgttaggtgc ttagctgatc caaatgccag tctatagatt tgaaagacta
      421 aagatcacat cactgggagg ttgacagaag tgacactttg caaagtgcca atgatttatg
      481 ccaatgtctt gcttgatgat actgttatag acagcactgt cattacaaag tccctaacga
      541 cttcagtcta catttatggt gcacaaatta taggtgagcc caaagatcga aaccttcctg
      601 acttttagat ttcaatgacc aagtaattct cacaaggttc gcttcttgtc tgttgcctga
      661 tactttacag ccgcttttct atttcaacat tgtaatcaaa tagcatcaac aagggcaaaa
      721 tacacattca ttacatatca ccaagctttt tttagacttc tttagcaaac accatgaaaa
      781 atacactaaa ttttgtactc catcacagag cagtaataca gctttggctt cttcatcagc
      841 agaaatgtta gccagttcta caaggtacca agagcctcac acaagcttct t
//
LOCUS       KCKM01000032             484 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 508apa ultra-conserved element locus
            uce-2030, sequence.
ACCESSION   KCKM01000032
VERSION     KCKM01000032.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 484)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 484)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="508apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>484
                     /note="ultra-conserved element locus uce-2030"
BASE COUNT          164 a           94 c           79 g          147 t
ORIGIN      
        1 aaaatgaata ctaatgaaac tccttagtta gctttctttg tgataagaat aaaaaattgg
       61 agctatgttc ctctagaatc tcaagtaatt tttgtccttt attctgatag aaagattact
      121 gacagtagag aaggagagta aagtaatttc ataaaatatc tgcattttta agaatgcttt
      181 tgttgcaaaa atgttggtgt gcaatttctt caatctactt ctaaggctgt aaagaaaaag
      241 tacctatttg ttctgcactg caacaatgcc agctgcattc aatcaactaa aaagctgcaa
      301 gccataaacc ttcctccaca gctatagaag aaaaaaaggc agggccataa aaattcatca
      361 ggataatgta gagatgaggc gcgtttgaat caccatccct gcaatcaacc aatcactcat
      421 cctgtggcat ttacagcaca tctcattccc ctgttcctta aggacaattg attttcctga
      481 ttcc
//
LOCUS       KCKM01000033            1023 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 524apa ultra-conserved element locus
            uce-5645, sequence.
ACCESSION   KCKM01000033
VERSION     KCKM01000033.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1023)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1023)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1023
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="524apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1023
                     /note="ultra-conserved element locus uce-5645"
BASE COUNT          296 a          206 c          209 g          312 t
ORIGIN      
        1 catgcagggc actgaattac tgctcttata taaagaattg tcaaaaataa ccaagggtaa
       61 gatccaagct atgttacctt gcacaactag atttgccaac attgtattga ctctggttgt
      121 cagacagctc ttctgtgtgg gttcacatct gctcatggga gcgttgtgca gaataaacag
      181 ataccacctt ctctactgca cttttgaact gttttattta aaggctaagg tgtaaaaccc
      241 agcaacagat gacaaattta gcataaaagc aaagtgaaat cacctttagg aacttgccag
      301 tttgaccatt taggagtctg aatgggtatt gatttgaggc gaatattcta aagtttgcat
      361 taccctttga aaagtgctaa tgtagttctt gtcactttaa attaacttta gataagaggg
      421 actgacagaa acatgaagat gtgtgaacta tatttgactg atattctgtc aaatattgca
      481 tggggttatg atccacaact tttcccatct gctgctcaaa cctgaatcct tgaatgcaca
      541 atggattaat taccatattt tgttctgatt tcacttagta gtataaaaga ctgtgaatgt
      601 taaatgtacc cttacttgcc tttctttctg aggctagggt atatgaggag gaggggaggg
      661 gggattcttt agcaattttt cacatccaca tataatgatt tgctaagagc acctcttctc
      721 aaataattag attcccagaa gttagctggc gtaacacagc actcggaatt tcattcactc
      781 cttcccttgt gagaattttt ccccctcagt aataaaagca atgagcactg atgtagcatg
      841 ttccatccgc tgcatgttac aagcagcagt gtaattacgt gaggctctgc tgttcggtat
      901 cgttgcagaa ggatgcggcg tggagcagtg gaggtcaaca ctttcgactg atgttacgtt
      961 tcccagaagg gctgacattg attccccagt accacctgcc tatcccaaca actcacactg
     1021 aca
//
LOCUS       KCKM01000034             799 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 539apa ultra-conserved element locus
            uce-539, sequence.
ACCESSION   KCKM01000034
VERSION     KCKM01000034.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 799)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 799)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..799
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="539apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>799
                     /note="ultra-conserved element locus uce-539"
BASE COUNT          252 a          151 c          129 g          267 t
ORIGIN      
        1 acaaaattct gcccagattc tgtttaaaga aatgtaatgc actttctttt tttttctttc
       61 tcccacagca atagtaattt tactttgatc tcatagcagc caaactatta aatgtaagca
      121 cgctcataag caaggtacaa ggcaggcaga gcctatgatt tctagtagaa ggtcataacc
      181 cagatttttt tttttaaata actattacaa tgaggaacag agtatagcca caaaaggaat
      241 agttataatt tatgcctgac ttacttcagc agaatatagt ttatttataa actgcttatg
      301 gcaaactctg tatgcccctg ttctatgcat gtgctgaact gtcttctggt aaattattta
      361 aattacacct agcagtaatt cctgaggact ttcatacttc attttctcta ttaatgtaac
      421 agggaaaagc tgctttgcaa ggattgctct aaattcccag agtgtgagtt ccaaactctg
      481 tatgtgttgc attatgcctg tcaaaaaact tgtcttctcc tgaaatttat tactgaagtc
      541 tctccactag aactactcat tgaagcctta cggaaagctc atacatgatt taagaagcta
      601 acagcactga aagaaatagg tcaggtaaaa aaaccctgaa tttaagctac cttcacttat
      661 tacttatgca agattatgca taatttagca cactgctgaa tatgcaaggg cagaataatt
      721 gtttaccaaa atatttactc tgtgttcgta cctgtgtttt agtgagataa ggtgatttct
      781 cagcccttgc taatcactt
//
LOCUS       KCKM01000035             993 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 553apa ultra-conserved element locus
            uce-987, sequence.
ACCESSION   KCKM01000035
VERSION     KCKM01000035.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 993)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 993)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..993
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="553apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>993
                     /note="ultra-conserved element locus uce-987"
BASE COUNT          348 a          180 c          158 g          307 t
ORIGIN      
        1 ttatgtgaat aagcaaagca taagaaaacc atttcattta aaggtgccat gagagataaa
       61 actctattct gtaacccttc tctaccccct ccacgcacac caccaaaaaa tgacttgcaa
      121 aatgaaatgc attcttctac tgctttgcat atttagggcc atctgaaagc acaataaaaa
      181 tatacttcat gataagacct acacacaaga tgttaaaaag tacactaact tttactaaat
      241 gttacaatca atgatgtaac ttatgtaagt agggttgctt tgtcatatat tgatagttac
      301 ctcactttca catccacatt aacttgattt taaatgcaat taatacatat agtcaaggaa
      361 gactaatgga ctacattctg cacttaacct ggtggacatt ttcaaatggc acaagtgacc
      421 agtgcaaaac tattttgcat tgtaaacgac taaataaatc ttaatggatt aagaatgatc
      481 agctatcaac acacaaggga aattaagtgc tgaaatgcct acattgatta ttttaaatta
      541 ttagccttac tctgttcttg aatttgtatg cttttagtga gctttaacac atttacaaga
      601 cttattgact ataattacaa gagaattcaa gtaatggaca catcaattat aagcaacatg
      661 tcttgaccag acagttgcat aaagaattct aaagagagct ccattagcat cctccccctt
      721 agttttattc agttttatct gccgtaagag ggcatattaa gggcttatac agctgttctg
      781 accatgtgaa catgagcgtc cctctaaaga cttaacactg cattcaaagt tggatattag
      841 ctgaagcaat acagataact atgttattga caggatagaa gtaatgctga aagtattaag
      901 cgtgtgaatt actggtatac gcgaatactg ccgttatagt aaaatacttt gaaaggtttg
      961 aaatacaatg tctgtgctcc ccaagattaa ttt
//
LOCUS       KCKM01000036             779 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 568apa ultra-conserved element locus
            uce-1232, sequence.
ACCESSION   KCKM01000036
VERSION     KCKM01000036.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 779)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 779)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..779
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="568apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>779
                     /note="ultra-conserved element locus uce-1232"
BASE COUNT          232 a          156 c          151 g          240 t
ORIGIN      
        1 ttagtgcgtt cactgttggc agcggacatc aagccaggaa aatccaactc ctgatgcaaa
       61 aggatttaaa aatccaggaa ctgccaaaaa tacataattc tttttttgta ctctgcagtt
      121 tgttttactt agggaaacgg cctggtcata ccctgcagca tgcattcatt acagtgatct
      181 ttgactggca gatgcagagt aataagatgc atattttagt gcttattata ataccctgtc
      241 caaaaacaac ttgacaaatt tgtgatttcg acagtatctc attttgctgg ctgcagtgct
      301 ctgtgattgc ctggtccacg tggcttccag attatgcata ccaccaatac tgctcattaa
      361 aatggccaca gttcaccagt ttcggtagct tggaacgaac ttggaatgaa ttattataca
      421 acaaagaggc tgctgtcatg cagaacaaaa gacaagcaaa agagagcttt ggcttaatga
      481 ggctaagtga gtgtctcccc tgcatcacca gctacttgac ggcctttgag cctggatttt
      541 tttctccaca ggccaaaacc tttggtctat tattttgtgt ttatgcacct tgaggctaat
      601 atacatttta atatgctgca catggagaaa aaaatcagcc attagattag aacatgtgca
      661 ctccctgtta agttaatgac agccgaacat agagataaat ttaggttttc atatttaatt
      721 atagcacagc gcagtacgtt tagcaaggat aaattgcact attattatgc ttcattttt
//
LOCUS       KCKM01000037             846 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 584apa ultra-conserved element locus
            uce-7144, sequence.
ACCESSION   KCKM01000037
VERSION     KCKM01000037.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 846)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 846)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..846
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="584apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>846
                     /note="ultra-conserved element locus uce-7144"
BASE COUNT          187 a          263 c          197 g          199 t
ORIGIN      
        1 ccccaggtgc ctccactgca gcgagctccg gctcggttcc tgcgccgtgc tgccacgggc
       61 atcaggtctg cagagacccc tgcccagagg gaccccttcc cagcacccat cacacagagg
      121 ggctttatag actctctgaa tgtctatgct cagaatacag tgagcagaga gggagggact
      181 tgaaaggagc taaggaaggg ttataaccct cctcaggcta caagccagcc ctgcagctgc
      241 tctccgacgc ttcagagccc tcatctctca ttttccataa ggtgggtgcc cagacaccca
      301 gaaggaagga gtgtccaccc gcacccacga cctgtcagct ctaggaccag ttcccagggc
      361 tgttccctgc tcctcgcagg ctctccctat ggctgcgtcc tggggaaggg aagggaagca
      421 aagcaggaaa gtttgcatcc ctgtgtcggc tgctccacag tgtctgtatg tgcaggaatc
      481 agctccaatt aatcccccct cagcttggcc cgcccgcttc attacctccc cttgatgaga
      541 accatcagtg gggcctgtat gattttgcta attagcctca cttcgtttat catttccatt
      601 ttctcccaga gacgctcggc ttgctgggcg acagcttcat ctcccgctga aacaatgcgg
      661 ccccttctgt gcccgtctca cttagcgctg tcaccacagc cattacgaaa ttggggtttc
      721 atttacacac taattaaaca ttacagcttg ttcacaatta caacatgggg atgaggaggt
      781 aactaattac ttaagaaatg agctaacatt tatctctgat tcctacccca gcctgacgcc
      841 ctcctc
//
LOCUS       KCKM01000038             506 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 600apa ultra-conserved element locus
            uce-3482, sequence.
ACCESSION   KCKM01000038
VERSION     KCKM01000038.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 506)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 506)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="600apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>506
                     /note="ultra-conserved element locus uce-3482"
BASE COUNT          144 a          125 c          142 g           95 t
ORIGIN      
        1 gcggtactta cggcgatgcc gtggccgaag ccggagcccg gctgcgggct ggcggcgctt
       61 atgtagttac ccacggcgga gtcctggctg gccgtgccgt agagatcagc gacgggtccc
      121 gggctgttgg ccccggggaa tcctccgggt cgggctgggt tggagcctgc cggggaagcg
      181 ggtgcgccaa aattcggttg agcactgtag ctattcaaga ctggtgtgca gagaataaag
      241 ctgggtatga ggccagacgc cgggcatgca ccgttaatta caaagccaaa caccagaata
      301 aacagcctag gcccaacttc taacacttaa ccaaggccat gcgataggag agcaagtact
      361 ggataaagag tcagcccgaa ctactacgaa gcttagagct ccaaaaatat atatatggat
      421 atatataaaa aaaaagaaca atcattcaac acactactgc aaccagagac tggaggtgct
      481 cattttcacc aaattatcac aaaata
//
LOCUS       KCKM01000039             701 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 616apa ultra-conserved element locus
            uce-6373, sequence.
ACCESSION   KCKM01000039
VERSION     KCKM01000039.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 701)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 701)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..701
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="616apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>701
                     /note="ultra-conserved element locus uce-6373"
BASE COUNT          211 a          173 c          140 g          177 t
ORIGIN      
        1 ctcaaattcc aggcacaggg ggaggctttg acactgctgt ttgttttctt attggagaag
       61 ttcaagagaa gctcaaggct taaaagcaaa cccttgaaag caaagcattc ctaatcacat
      121 aaaagtgtct gcgcaggcca gggctgaaga gggggcttgt gactttaatc tttgcatatc
      181 cctttctttc ttcaagcatc tctccctctc acaaacagac acacacacac acgcacacac
      241 acataaaact ctccccagtg ccaatagtat aatggtccag gagaggaaag cggaggaaga
      301 ggaggaggag gaagctggcc cgcctgcctg cccccatgct gagcctgagc agactttgtg
      361 agaaagcttc tctccatctg cagcccagcc cggtgggagt caattaattc tgaataacct
      421 aaaccgacag aggtatttgc attcacaacc tgactgatga ccgtataaaa ttgatttatg
      481 aattgaagta ctttccctcc ccttatcccc gattcaagcc ataattgatt atacgtgctg
      541 cagcgaaatt aaagaaaaga aaattaaaaa aagaaaagaa aaaagggagg ccccacagac
      601 gctgctctat attctcaagg tttcccggga ttagccgatc tattcatcac ttattttttt
      661 ttatttaaaa agttgcttcc tttcccctct ccaccaactt c
//
LOCUS       KCKM01000040             652 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 630apa ultra-conserved element locus
            uce-6163, sequence.
ACCESSION   KCKM01000040
VERSION     KCKM01000040.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 652)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 652)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..652
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="630apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>652
                     /note="ultra-conserved element locus uce-6163"
BASE COUNT          216 a          126 c          123 g          187 t
ORIGIN      
        1 tttaacacca tctggaagaa aagatccctt cacgactttc tcacaccgtc agacaaaact
       61 agtgtctctt gttctgagcc cttgtctatg caaccataca atactgagtc attatacttt
      121 tgctgagaga aaatttgaga acacaatatg ggtaaccagt gaatgaccaa gtttcattgt
      181 gtctgcttaa gtcgattgaa atctacgtct aaagccatga atggcagcat tgttttcctc
      241 accggggctg tactaaatgt cagcacagtg taaagaaaaa cttgaagtct gcaaataacc
      301 taccagatct caattataat attttcccac actagaacta atatcattgc tagggtccac
      361 aatgcacgaa atacaaaaag aagcagggga aaaaatgtgt tcatttacaa gttgttttag
      421 ccagataaat attttaattt ttgtatggga acaggggttc agcgtgtaga gctggctaat
      481 ggtttcgtga gaagttcaag ttaccaaact gcttcttatg taattaagaa aataaacagt
      541 gcaaacaaac ttgtattcaa caactattgc aaccctctag cttgtgacgg ataaaatgta
      601 agtaagtgca ctccatagca tacaggtcct tcttctgagc ctaggggaag at
//
LOCUS       KCKM01000041             959 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 644apa ultra-conserved element locus
            uce-4107, sequence.
ACCESSION   KCKM01000041
VERSION     KCKM01000041.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 959)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 959)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..959
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="644apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>959
                     /note="ultra-conserved element locus uce-4107"
BASE COUNT          216 a          284 c          207 g          252 t
ORIGIN      
        1 gaggtgggaa tctcagcttt gacccaagtt tcttgagagg ctgtagcaaa aacccagaga
       61 cacgtaaccc tcaaagctca gaaaccagga gacgaatcat ctccaaatcc acctctgtct
      121 ttctggctct tttgcagtct cttgattttt gagacttttt tcctttcctc cggcctgact
      181 tgtgaccttt gagcgctttt caggcttgca atgctgctcc ctcccttggc atcggtggag
      241 ttagaccagg gatgactttg gcccagcgct tgtagaagac aggttgatga ctctgttcct
      301 tgcaatgtat taattggtat gatctgctgt tctcttgggg gccaaaggag tgggttttct
      361 tagagaagta aaattctatc atcacttggt acaaaaaaat ggtatttaca gaattgtttt
      421 cccccgtctt ttgttataat tttttaggtg cttcagagct gggcccattt tcagatccca
      481 ggcagttcac aagcatttca tccctcactg agagccgctt ctccaaccca cgaatgcact
      541 atccagccac ctttacctat acaccgccag tcacctcagg catgtcactg ggtatgtccg
      601 caaccactca ctaccacacc tacctgccac caccctaccc cggctcttcc caaaaccaaa
      661 gtggaccttt ccagaccagc agcactccat atctctacta tggcacttcg tcaggatcat
      721 accagttccc catggtgccg ggaggggacc gctccccctc caggatgctt cctccgtgca
      781 ccaccacgtc caacggcagc acgctcttaa accctaactt gcccaaccag agtgacggtg
      841 tggaggcaga tggcagccac agcagctccc caaccgtctt gaattctagt ggcagaatgg
      901 atgagtccgt ttggaggccg tactgagatt tcttccgtag ccggcccgac ctccgcgag
//
LOCUS       KCKM01000042             604 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 659apa ultra-conserved element locus
            uce-490, sequence.
ACCESSION   KCKM01000042
VERSION     KCKM01000042.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 604)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 604)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..604
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="659apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>604
                     /note="ultra-conserved element locus uce-490"
BASE COUNT          177 a          116 c          143 g          168 t
ORIGIN      
        1 tttcaatgaa ctttgacatc gtttgcgtac taaaatcagc tttaaatttg ctttaacgta
       61 aagagaagga aggaaatgag tcttaaaaca atgagaagcc ctcagtagct gctcaagtgt
      121 cattttgcta ctcggccccc tcatttttcc ctaaactgaa actgtacaaa agaggttgat
      181 ttacaaacac tgtaaattca ggctgaacaa aatccagttg gagctcactt gagcactgtt
      241 ttgatgtaag attcaaagct cctgcaaatt tattttatct cctacactcg ctgatctcct
      301 gcttgtaaat cctgttgaag gagaataaaa atgagtgcag cctgatggga atttaatgtc
      361 tgaagttcaa agcagtttgc acatcagagc aaacgtcaat caaatgaaca tcttgcaagc
      421 caggcagaga gcgcgttttt ccatggggaa gagatcaaag tgggagtcgc agctctgttt
      481 gctccctcgg gacgcggttt cgatcggttg ttcattaaag tgaatccaga aggaagggct
      541 tcctaaagag gcggggaaag ggggagagcg ggcctgtctt gaaactgaat ttctggtttg
      601 ggtt
//
LOCUS       KCKM01000043             427 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 674apa ultra-conserved element locus
            uce-6207, sequence.
ACCESSION   KCKM01000043
VERSION     KCKM01000043.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 427)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 427)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="674apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>427
                     /note="ultra-conserved element locus uce-6207"
BASE COUNT          135 a           79 c           99 g          114 t
ORIGIN      
        1 ttttttttct ttcgttcatt ccatcacatt gaaaaaggaa gaaaaggatt tttttttcct
       61 cttttgtttt aactcacttg ataagtttgg actcctcgga tgaacgtaac attgcacaca
      121 cacacacttg gagaagagag agagggagag agagagagag cgctcgcggt gggcagacag
      181 acacacgcac gcgccaggtc aaagaactct gatacagtgc aagaattttc ccaaaatgat
      241 tggatcatca ttaccaaaaa actcgccata acaacaccaa gaaacaaaga aatgtttaag
      301 ccacactgtt tgactgggat ttttcctgct tttttttttt tctttaaatg tttgccacac
      361 agagagaaaa agggtttaag tgggaatggg agagggatgg acaggctcac aggtgtgagc
      421 aggaagg
//
LOCUS       KCKM01000044             844 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 688apa ultra-conserved element locus
            uce-1385, sequence.
ACCESSION   KCKM01000044
VERSION     KCKM01000044.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 844)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 844)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..844
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="688apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>844
                     /note="ultra-conserved element locus uce-1385"
BASE COUNT          283 a          133 c          146 g          282 t
ORIGIN      
        1 aacaaataca agatgtagca gtctctgatg caaccaagta cttaaattgt tttgaaactt
       61 ttttcagctg tttagttttt tacagaatgt ttgaaaactt acacgcttat gtttgtttga
      121 ttttctttta aactctgagt gttagggaat tttacactta cagtagcagt ttagggcttt
      181 tcaattgtgt agatatgtaa ccaagaaaat taaatagaca gaagtgtcat gcatatgata
      241 tgccagcatt gatttgtaaa gcatatcaaa atatcagagt gctattggtt taaagtgaaa
      301 gagcctttat tttggcattt ctttctagag catgagctta aacatagcag tgataaatga
      361 tgatatgcat tgtctaacac ttgcttttat ataaatagct ccagaagatt gcttaaatga
      421 taatcgaaaa tatgaaatag ggtggccttc atatcacaag gccaagggtc tacaaatgga
      481 aaaactgaaa taatgaaata tttccaaggc aacagactgt caacaagaac agtaatgcat
      541 gggcatatca tagagctacc agagaggata ttagatctta cagctctaga gccaggagtt
      601 ataatgacct ttattaaata gagccctccc acattacaac aatctttctg atttgtgatt
      661 tatggattag cagtcatact actcttcata atttgaaaca ttctcccacc atatttgatt
      721 tgctgcattt ttctccactg gaatcataca ttatttagag cttacatgag agtattgatc
      781 aacaaaactt atattacata ttttcagtaa ctagtgggat tctgaataac aaggttttgt
      841 ctgc
//
LOCUS       KCKM01000045             909 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 702apa ultra-conserved element locus
            uce-805, sequence.
ACCESSION   KCKM01000045
VERSION     KCKM01000045.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 909)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 909)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..909
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="702apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>909
                     /note="ultra-conserved element locus uce-805"
BASE COUNT          283 a          185 c          156 g          285 t
ORIGIN      
        1 agcaagcagc aggaaatcaa ccttatgaaa ttttagctat gtacagcaaa gtgaaaagat
       61 agaaacagga acctatgttc tattagtttt gtccatgaga aataaagtac ttatccataa
      121 aaagggtgta ggccaaaatc ataaagaaca tgttaacact gctagcttgt aatggatgca
      181 atcatactat tactatctaa atttttgttt atttttcaac agattggtgt ctgcaaatca
      241 tgctgtctta cattgccatt cctctgtaac cttaaccatt attcctactg tgtaaagtga
      301 agcacaaatt taaggtgaca aagcaccagt tggctgatgt gaagtatgct acgaaagcag
      361 aaacctctga aagcttcaca gccattatga aataactgac ctatatgaaa ctgctaccat
      421 ggttcacaaa tttattgtca ggttccagcc tctagctgtt ctctgattgt tctaaatact
      481 tgacaaactg aagccttttc actttccgtt gaaattgcct catctccctg tcagagcgcc
      541 atgggggact ccattacttt tctgacttct ttcccctact gacaagtcat ttagctggct
      601 tcttgttgtg aaggctgtcc atgtcaaatt agccagggcc cctattgtcc ttattaccac
      661 tcgaaaagcc atcatgagta atgctacggg gtccctcagt tgtcatcatt tgtcagaaag
      721 aaagggagtg tggttacata tagctgacag gtaatttcag tgtctacaat taccccaatt
      781 agtcttgtca taaacaattc gataaatgca caccaataca aacagataaa cacacccagg
      841 tttctcacta ttaatgttat gtaatggata aaccagtgat ataatgctat attttattta
      901 tttctttaa
//
LOCUS       KCKM01000046             593 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 718apa ultra-conserved element locus
            uce-3484, sequence.
ACCESSION   KCKM01000046
VERSION     KCKM01000046.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 593)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 593)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="718apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>593
                     /note="ultra-conserved element locus uce-3484"
BASE COUNT          194 a          120 c          113 g          166 t
ORIGIN      
        1 acagaggacc cagaaattaa attatgtgtt aaaaacattt gtatttgtca agatgagaat
       61 cctgcattta aaaaaaattc ctgatgtgtc ctctctgaca cagaaatctt gtgtttcagt
      121 gcctgactaa tctctgcctt gctgatgctt ttgaatgagc tttgtatgtg aaagctcgac
      181 taatccttgt acttactgtt tgaatgtttg ctacaggaag cgagcagctg caaagcatct
      241 aatagagcgc tactaccacc agttaactga gggctgtgga aatgaagcct gcacgaatga
      301 attttgtgct tcctgtccaa cttttctccg tatggataac aatgcagcag ccattaaggc
      361 cctcgagctt tataagatta atgcaaaact ctgtgatcct catccctcca agaaaggaac
      421 cagctcagct tacctagaaa acaattccaa aggtgcccat aacaattcct gcactgacag
      481 aaaaatgaac aggaaggata tgcaaggccc aagagatgac tttaaaggta agatgttatt
      541 tcagaatttt cctaaaataa aatacatgta atgtgtacaa gtataagcct aca
//
LOCUS       KCKM01000047            1052 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 733apa ultra-conserved element locus
            uce-3010, sequence.
ACCESSION   KCKM01000047
VERSION     KCKM01000047.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1052)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1052)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1052
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="733apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1052
                     /note="ultra-conserved element locus uce-3010"
BASE COUNT          359 a          179 c          164 g          350 t
ORIGIN      
        1 aagtgtgaat aagtatgcaa gattatacac actgtaaatg gggcatgcaa ttttaaaata
       61 aagccctaaa attctgccgc tgctcaggct attgttaatt agatcattta aatctattac
      121 aaaataacta ctgaattcaa tctgttccct tttctatgct ttatttctgt tgatgatttc
      181 ttgtaaaagt aaaatgatct cacagttgta ttattgctct accctttact ctagatgcat
      241 tgtataaaat ataatgcagt acagatgtca acctaagaac tgaatagctt atatttctga
      301 agaaccatga aaaaaatatt aacactatag aaacaatggt tcagtaatta ctttttgctg
      361 tggagtgagg ttaggcattt atccttatag atccctaata cacttaaagt cagcgctgcc
      421 cctgtggtcc ttttaccttt gttgataaat gtattgtaca ggataccttg tatgaccact
      481 acagtatttg aggtcatgct aggctgttag cacaaatggt gtgaacaata gtttatatgc
      541 cacttaactc cttgggagaa acagttaacc ttgccagaga ggactgatca gtcatctata
      601 gttattaaag tctagaaggt tttgttatgc tctgaaatac ttttatagaa ctacaatact
      661 ctggtacaag ctttaccaag caggaagcaa caaagtcaac aattttcttt gctatatttg
      721 aaagggatat tcaaagtttt caaaaaaaaa agaagaattt tatgaagtgc acacaaacat
      781 attttaacat atttcttcat taaacttcct gaacaatgtt aagcagataa aaatatatta
      841 agccattgct tttaaaagat gttgtggtga ttttcatggc cttgaaatgg gcagtcagca
      901 gtaaaaaccc caaaatcttc ttgattacag ttttcaaaac catgctgaaa cttcataaat
      961 tacacaaatg ggcatgatca ttgaatttta tttaattaac atttagctat aaaacacacc
     1021 ctcccagcag atatcctttt acagaatttc tc
//
LOCUS       KCKM01000048             588 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 747apa ultra-conserved element locus
            uce-2566, sequence.
ACCESSION   KCKM01000048
VERSION     KCKM01000048.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 588)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 588)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="747apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>588
                     /note="ultra-conserved element locus uce-2566"
BASE COUNT          138 a          154 c          124 g          172 t
ORIGIN      
        1 tggccatgca aggttaattt tattgtgcct cataggaatt ctttaattga tgtgcacgca
       61 tacttttagg ctgtgcatga gtgtcaatgc aaagttagac gctccccatt aacctgccga
      121 gctttcccct tctctctctg cacctcaggg attgctggct aaggcactct gggtatctca
      181 gcgaatgcct tttccgtggt gctccacacc ctttccagtg ttttccagct aatgcctggg
      241 aagagaggag ctgctaagat ctctaagatt tgtttcttga caaatgtccc attttcacag
      301 gcagttgaac cgaactgcag cttgtgctcc gttcaaacat gtcaataaac attattgcaa
      361 agacgtacaa gcaataatgg gaatgtataa aactcacctt tattgcttct tgccgtgaat
      421 ttacacgctg ctctaaacag cttttactcc tccgggggaa agccttggga ttttgccttt
      481 actcgcacgc tgatttcccc agttcgtacc agtgaccctt gctgcctttt ctgcctcccc
      541 accacgagtg ccagggacgg gaacactgca gcaaaggtac gaatacac
//
LOCUS       KCKM01000049             349 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 763apa ultra-conserved element locus
            uce-743, sequence.
ACCESSION   KCKM01000049
VERSION     KCKM01000049.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 349)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 349)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="763apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>349
                     /note="ultra-conserved element locus uce-743"
BASE COUNT          111 a           60 c           63 g          115 t
ORIGIN      
        1 gaaaaataca tgagaaaagc tttttggtag ctcaaaacct gtcttagttc attacgagct
       61 cttcatactc ggtgtgaagg tttatactgt attctttcta taatattaag gatgtattat
      121 ttatacctac tgtggccatg tcatagaata caacagtaga gtttgtttag caacagagtg
      181 aaaaaatatt tgctacaggg gcagtctggc aatattgctt gttaaggcat gctatttgta
      241 agcaaattta tatgaaaagt atgcaatgtc taatactaaa ctactccagc cccagactga
      301 agggtgattt tacaaacgtc ctgcagcact caatcattcc ttcatttta
//
LOCUS       KCKM01000050             966 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 777apa ultra-conserved element locus
            uce-1616, sequence.
ACCESSION   KCKM01000050
VERSION     KCKM01000050.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 966)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 966)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..966
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="777apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>966
                     /note="ultra-conserved element locus uce-1616"
BASE COUNT          307 a          208 c          171 g          280 t
ORIGIN      
        1 gaagtcatag ccaagggaat tcactatctc ttgaatgtgg aattgatctg aacgcaatta
       61 ctttactctt tttagctcca tttgactttg aactaaacat caattagtgc acaaacctaa
      121 caccgcaaga tctgttaaca ccaatacaga tttttccata gaagatctaa agcaaattta
      181 ttggcctccg tttaatagct ttcagcagcc ccaaatatcg caccagaaag ctcaacttca
      241 ctttccgacg gtcacttaaa cccttaattc tcacgataaa cctcgctcgg gccttagttt
      301 taaacccctc aaattagcaa ccaagacacc acataatata tgccatcagc atcggtcttc
      361 tctgaaaagc tgggaccttc cagtgcttca gctgcgagac gagtcattga gccacggcca
      421 atgtaagctc atttgaataa tcaatatgac aaccttattt ttctaatgca aacaggattg
      481 atacagtaag gtgtctcact gccacatcac agtcatggcc tcttttaacc cttaattaga
      541 tttaggcgat tatccctgct cttccttaca agtgtacagc ccggataaga gatgacaaaa
      601 gctatctgcc acttactcag cctttgcaga ctgcaggtta tccagggaga tacaggggaa
      661 gatcagcaaa caattgttat tcatatcatc gacagtttta agatagtcac agttttccat
      721 acatgtgaag ggaaaatagc ccagagcatt aggtaaatgc aaaacgcttt aagaacatca
      781 gggttacaca gatggaaatt caaggtgatg ttagggagtt atgtttaatt caaatcggtt
      841 atcaaaaaat aagtatctag caatgatttg ctttttcaga caggaaacac caagttttca
      901 agagatctgt gttcattggt tttttgtgtg taacactgag tatttgacat ggctatttct
      961 aaaaaa
//
LOCUS       KCKM01000051             591 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 793apa ultra-conserved element locus
            uce-965, sequence.
ACCESSION   KCKM01000051
VERSION     KCKM01000051.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 591)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 591)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="793apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>591
                     /note="ultra-conserved element locus uce-965"
BASE COUNT          212 a           98 c          101 g          180 t
ORIGIN      
        1 tgattgatac acagaaagga cttcttgctt ttgaattaac gtgttaaagc gtacataata
       61 aattgggaat tcttacaaac agataagaag gttttaactg ccttatggac aaataagaat
      121 acaataagct tgaaacaata catttaagaa gaagaaaaac aaagatgtaa ggtcagacaa
      181 tatctcaaat aacatttgga aaatgctgcc aattgtttgg ataactgtac aatgccaaag
      241 cctcttataa cattgttaag tctttattca gtaatacatt atcatgcata tttcatagca
      301 gggattacta agacagaatt gtgtgtcatt tttgttgtat gtctttataa ttacaccttg
      361 aagccacaac tagatttttt ttttactaca tattcatgaa aagcggactt gtaatttgat
      421 aaagggtagc ttgtgttctc aactccattc aaacagcatc atgaagcaga attaaagtag
      481 gcatctgtgt tctcccagca ttaatctctt caagcacatt ccagctgcta tgatgtgcaa
      541 gagggagata agtcctaaac ggactaaagc taagcaagcc agacaactct a
//
LOCUS       KCKM01000052             944 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 809apa ultra-conserved element locus
            uce-7854, sequence.
ACCESSION   KCKM01000052
VERSION     KCKM01000052.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 944)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 944)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..944
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="809apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>944
                     /note="ultra-conserved element locus uce-7854"
BASE COUNT          209 a          237 c          252 g          246 t
ORIGIN      
        1 tgggaaagag gatgctcagt agttgtcaca cagggtcctt ggttatgact tctgagccac
       61 ctccagcgtt tctcagtctg caacttttca atgaggaaag tttttaattt aagttctcct
      121 gaggctggat gccagcatgg agcctggctc agctgcccca gcggtactca gggcaagtgt
      181 gccctggtag taactggggt aactcctact aaattctctt tagaagttcc actgtattta
      241 tgggtgggac ggctggggga atgccaaccc tcccaccttc ccccacgttg tctcaaaagg
      301 tcctggtgca tctttgatta ggtgtaggtc aaaagaattt ccacatcgtg accttaataa
      361 ctggggttga ttggcaggcg gtctgcggag aaggagcagc ctgtcccttt catctccctt
      421 ggtgccgtgc tgggacaatg ggccagcata ttttccttgt tgttcctcat ttgaaaaggg
      481 tctggtatct ctactaggta cctgtgacat gggggtcttg attggggtct cataaagggc
      541 cctgtcagtg tgtccaaagg ccaggaacac aaaggcgagc agtgggtggg ggtctcagct
      601 gaccactgaa gaagggaggg gagggtcctg gaagcagtgg agggagaagc aacccctgat
      661 gggagacctt aaagggggga ggggggagga ggcggcccat ttttgtcccg aactcatcaa
      721 gcacatctgc agaattgtcc cagccgctgc ctcccagttt caaaagaaaa tgatcgtttg
      781 ataaaccgtc ctgattcacc actttctcac aagggaggga gacccacctt tgacctctat
      841 gatttcacat tgggcccagc tcccccccat caaattgctg gagaaacttt gaaatgcatc
      901 ccttgcactc actctccttc tctctctttc cctttacttt cccc
//
LOCUS       KCKM01000053             333 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 824apa ultra-conserved element locus
            uce-7641, sequence.
ACCESSION   KCKM01000053
VERSION     KCKM01000053.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 333)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 333)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="824apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>333
                     /note="ultra-conserved element locus uce-7641"
BASE COUNT          106 a           53 c           71 g          103 t
ORIGIN      
        1 gaatcacagc tgtagtagca gataaggttg acattcagtt cttagaaaga agcaatcaat
       61 gttgaatgta tcagccgagt tcatttctct tactctgctt taatagctta taaagaagat
      121 tgattaagtt cttgtctgat agatcaataa tggaatgaaa ctgagctttc cctccttcaa
      181 ggataggttt gtcatatgct agggaatgta gatactaaag agaagtaaca ctaacttgga
      241 aaaaaatccc atacccggag attctaatga gctcatttgg gtgattttgc ttgcacggcg
      301 tgtaaaacaa tagtcatgtg attcacgtgg tgt
//
LOCUS       KCKM01000054             802 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 839apa ultra-conserved element locus
            uce-7783, sequence.
ACCESSION   KCKM01000054
VERSION     KCKM01000054.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 802)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 802)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..802
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="839apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>802
                     /note="ultra-conserved element locus uce-7783"
BASE COUNT          229 a          122 c          159 g          292 t
ORIGIN      
        1 atgggcattc tcgtgttttt ctttgtcctc tcttgtacca gttacctaca aaatgttacc
       61 attacacatt gagtatttga tgtgctcttt tggttaagct gaccatatta ctttcactga
      121 gaatatataa ttgtattgat attttcttat tcctttcaaa ggcgtggaga cttagaagta
      181 gtcaataatt atgcatattt gtgtttctct tttagtggag gcgatagtgg agtttgacta
      241 caaagctcaa cacgatgatg agctgacgat tactgtaggt gacataatca ccaatatcaa
      301 gaaagatgat ggaggctggt gggaaggaca gctcaaaggc agaagaggtt tgttccctga
      361 caactttgta agagtgagta caaagtggaa ctgttcttgt gttgtgtgta tatgttttgt
      421 gtactgtgct gttcaggtta aatattagcc tttaaatcat aatatttctt atatccacaa
      481 ccgtaatata ttgcaataca atgtttcatt gaggcaatgt tacaaaaaaa agattaatct
      541 ctttgcaaag acaatgtagt tttgatatcc tgaaaataaa agtacctgcc tctatgtttc
      601 tatgctgttc agtgataatg tttgactgtg tgatctagga acaaagtgat tattctagaa
      661 caacttatat gtcatggcat ttgcagtatt ttctcttctc tgtaaccgct tcttctccag
      721 agtgctttca taggttttat agaagctttc tgtgaatact tatttctggc tgaagtagtt
      781 gagaataatc aaagtggatt tt
//
LOCUS       KCKM01000055             972 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 855apa ultra-conserved element locus
            uce-7583, sequence.
ACCESSION   KCKM01000055
VERSION     KCKM01000055.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 972)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 972)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..972
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="855apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>972
                     /note="ultra-conserved element locus uce-7583"
BASE COUNT          287 a          215 c          174 g          296 t
ORIGIN      
        1 agagttttca cagacaacaa ttacacaaga gggagtgccc caaaaaaacc cagacagtct
       61 gcaaggactt taaggcggca gagagttggc cccaagctgg atgaactcta cagcccaggc
      121 tacgtttgac ttgcaaaacc ttaaactggg taaacctact gcagaaggac aaaggagaag
      181 cattgcacgt attgcatagt ttctaagctc tcctcactac ctgaagcaag gtgaactgct
      241 gcattcccaa caattttcca ctatgatatc tatttcctag gaggcagaac caggcctacg
      301 taaaataatc aggccccagc tcacaacatc ttgccctcct ttttgcactg gagcaccatt
      361 atgctggtat gcattgctca gcctgtcgct atcacacata caattaagtt cagcttctaa
      421 aagctctacc tgtaattgga gccagctgca acctttctga cacatactaa ttgccagtaa
      481 tgatttaagt gcagtaaatt cacatgctgc aattgtttta aataaaggaa tctctcgtag
      541 cttttccctg agaaaaatct gttaatcttt gctgctgact tatcaaatcc tccagtcacc
      601 tgtttgccat cattttcatg agctgataac gtgtttatta gcaccataat atgcaggtgg
      661 aagcgtaaag gtctcacttg ctggagtatg atttttgtct catatatctt gtacggaaaa
      721 gctcggtttc accaaccggc tgtgcctcag aaaagactac gttccaaaat agtatctttt
      781 attcttctca aatggaatat tagttctttt aagctcagta catatctcaa aataccattt
      841 gaatgagcat gacaggttgg tttttgttaa gctacctgat attattactt cctatggtaa
      901 atctatccag ctttagttaa tttcaggtta attgtattcc ccttttaatt atttttcata
      961 tataaaggaa ag
//
LOCUS       KCKM01000056             738 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 868apa ultra-conserved element locus
            uce-849, sequence.
ACCESSION   KCKM01000056
VERSION     KCKM01000056.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 738)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 738)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..738
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="868apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>738
                     /note="ultra-conserved element locus uce-849"
BASE COUNT          216 a          146 c          176 g          200 t
ORIGIN      
        1 agattggaga agtaagtgtg ggtgggtaag acggacgtgg tggaagtgtc ttccttctcc
       61 aaatgtcctc cttcttctct gtctcatggc aatatatgca tgaagtggcc acttctggag
      121 aagcagaaac caaacacaag gtgaagtgac tgggtccctt tggaagaaac gatgttgggt
      181 cctcaagagg gcagtgagga ggagggagga gggatagctt acaaaaaaat aactaaacct
      241 ggaaaattca aatgcctctc cccccaaccc catgcacacc acccaccctt caccatgttc
      301 tgtccagaag aaaaatccct cagtcgcaat ggttgttttt attaaattct cctcaataaa
      361 aagctcaggc aggatttatt aggtactcag ggcggacgtt tagtatttcg ccagttatta
      421 agtgaaaatc aatagaaagc aaagaaaatg gaagtcactg cactgttagc acgctgttgt
      481 cgcccagata ttatgtcggc tgtcttgtag attcatgaca gacgaaagcg gccgggagag
      541 aactctttct gcttacattg caggagccaa agtggggtta ttcattagat caggcagctg
      601 gccagatgga tttccagttc agttttacca tttatcttaa aaacgcctgt atcgagtgag
      661 aaagaacact gatattatgt gatatcgatg gcagctttat gtatctaaat caggatttat
      721 tgttattttg ttctgaag
//
LOCUS       KCKM01000057             572 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 884apa ultra-conserved element locus
            uce-3929, sequence.
ACCESSION   KCKM01000057
VERSION     KCKM01000057.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 572)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 572)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..572
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="884apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>572
                     /note="ultra-conserved element locus uce-3929"
BASE COUNT          165 a          113 c          115 g          179 t
ORIGIN      
        1 ttttgcaagc ttccccacta agcctgggaa tgcagtacgc tgaggcctat tcacaggctt
       61 ctgacataga ccgagctttt attgcgtggt gttttattat agccaaatcc cagtctccac
      121 ccagtttgta ggcactgtgc ttattctttt gaatcaagag aggttatcac ctaccttaat
      181 ccatgcagca gggtggatta aggacaccaa tgtgcctcag gattctcaaa gaggatcctg
      241 gaaacttctt gtttcttctt ttttgctgtc tttactaaac tctattgggc ttcagtaagg
      301 atttgcatct gaaatgggca acctggagct tttctcaatg aagacatcag atcaaagttc
      361 agttagtcaa ggcctttcta aaacattaag ggggcttgga agtacacaat aaaaagatga
      421 gctctggcag agattgcagt aaaaacattc tgatctgtaa tccggataaa gaatagatta
      481 taggccaaag aacagcccct gtttaaattg ctttcagaat cctccttttg aataaagtta
      541 cgttttactt gaaaaatatt tagattttga ta
//
LOCUS       KCKM01000058            1130 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 900apa ultra-conserved element locus
            uce-6242, sequence.
ACCESSION   KCKM01000058
VERSION     KCKM01000058.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1130)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1130)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1130
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="900apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1130
                     /note="ultra-conserved element locus uce-6242"
BASE COUNT          236 a          320 c          339 g          235 t
ORIGIN      
        1 cccaggtccc agggggaaca tgctgctacc tcctcctgct cttggcacct gggagagctg
       61 catttctacc cggtttcgct tggttttctc tgcagacaca ggtagcagct accctaccac
      121 actcctgctc tttgcttccc actttctgac ctttcagtct ggttttgccc caaagctagt
      181 gtctggcatc ttgatgatgg gctgtcctgt ctttctatga aatcgagaga ggcagagggg
      241 tgggttttgt gaggaacagg ttactacagg aatagacaat gggggctctt cctccccagc
      301 cttggtgaag ctcaggcaac tgtactggag aaatgaaggg aagagttatt ctagaccttc
      361 atgggcagcc ctgaggccac agatacggga gccgggctgc cctggcaggc agctgccttg
      421 tttgggctgc cctcacacgg gggccagagc gagcggctca ctgtgactgc tgcatgaagc
      481 gagggtttct gcttttcctt aattctggcc tctctttatc tttgctgttt tcagttcaag
      541 atggctttcc catgcccagg cgcttttcta aacccgaata ccaacaattc tttttaggga
      601 tgcacaaaaa gtctctggag gcagcggctg aggcggggag gaagacggag gtggagcgcc
      661 aggccctgcc caagcttgac aagggtgaca aggaagagag gggcctggat cccaaaactg
      721 ccatttccca agaggaactg agggaaaaca gcattgccgc cctcagggcc aaagctcagg
      781 agcacagcac caaagtcctg gggaccatcg ccggggacac cccggcccca ggcaggaagc
      841 cggagacagg ggaggaggcg gcagtggtgg aggatgagag acagacggag aagttgaact
      901 catcgcagaa ggaggagaag ctgatctagg ggggaagagg cagtggaagc cagccccaac
      961 agacactgcg tcctctgggg gccatgttca ccctcggact gcagggcctc ccagccaccc
     1021 ctgcctgggg agcgaggccc tgacctctgc attttgggct gcctggcagg ggtgttcccc
     1081 accagctccc ctcaagcgta cccttgcccc tcgctcctct gccctgcccg
//
LOCUS       KCKM01000059            1060 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 916apa ultra-conserved element locus
            uce-6363, sequence.
ACCESSION   KCKM01000059
VERSION     KCKM01000059.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1060)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1060)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1060
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="916apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1060
                     /note="ultra-conserved element locus uce-6363"
BASE COUNT          281 a          213 c          229 g          337 t
ORIGIN      
        1 aggcagtaaa atgaggactg tgtggtacat gtagacatat aatgaattgc tacacaagta
       61 gctacgcaag tgaagaaaat tgcccaaata ttttcctctg acatctccta aatggtggca
      121 gcaagtctca ctgaagcaga gggggggagc gtgcagggaa tttggtacta ccccatgccg
      181 agaggttaat gtgctgaaat aaacagagta tgaaaatgta actttctaca caagctgttg
      241 aatacagcta tcttgaattg ttttcggctg ggttcaggtc tttacgtttt gatgctaatt
      301 aagattaaat atctctcact actgaatttt gtagatcaag ttcaagtact tccctaatgt
      361 catgtaattt tctggcatta atacacttta tcattgtcat aagtataaat ggctcattaa
      421 aaccaggagg gaatacaata cttttatgga tttctgctct catgttaatg ctgttttcct
      481 ttcctcatga gtaatctctt gatggcttct gtctccacag aacagagata actacatccg
      541 ttcctgcaga ttgctccctg acggccgcac cctgattgtt ggtggggaag ccagcacgtt
      601 atccatttgg gacctggcag ctccaactcc tcgcatcaaa gcagagctga catcttctgc
      661 tccggcttgc tatgccctag ctatcagtcc tgattccaag gtctgcttct cttgctgtag
      721 tgatgggaac attgccgtgt gggatctaca taaccagact ttagtaaggt aggtcaacaa
      781 aaactggatc atcaagttgt gaagaattaa ttagacacag ccttatgagc ttttctgtgt
      841 gtgtttgcct tgtgtgcgca tagctgcttc tggtatttca ttgctgggcc atagccgtgg
      901 taataccttg acaaaagtct agataattgt ttatgggatt tgagagtttc ataattccag
      961 gcctgttgag cagcccatga ttacagtttc ctaagatcag ctagtattga cactactgta
     1021 gattctttga acagatggtt ttctttgttt ccttgcaata
//
LOCUS       KCKM01000060             935 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 947apa ultra-conserved element locus
            uce-4679, sequence.
ACCESSION   KCKM01000060
VERSION     KCKM01000060.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 935)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 935)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..935
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="947apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>935
                     /note="ultra-conserved element locus uce-4679"
BASE COUNT          281 a          194 c          162 g          298 t
ORIGIN      
        1 atttatttga aaactttatt cagtcacatg cctctgtgtc cttttaaaag aagccacaaa
       61 tatttatgag gcaattttaa tgcttaccaa ttacttttgt ggggcttggt gttagagtag
      121 gcactgtaat atctgtggtt gtgtcaacct tggctgatat ttcctaatta ttcatatcta
      181 gaagtgttat cagccatcac agagcgttac cagcatcatt ttaagctctc ttcaccttct
      241 tcagtctggg ttttatttga aaagcagaca tgcagtcccc agtgagaatt aaagtagaag
      301 cattagcttg caaaatatat gccaatgacc taatgattct gacatttcca caatacaagc
      361 tttacaagaa ggcatgcaga cagcaaagtc tgtttttcta tctcatattt ttttaatggc
      421 taaatgtttg gaggaaacaa aatggattta ttctgctcaa tccagggtat aatatcagga
      481 cttatccggt tccgggcccc agggcttcag acaactaaca aaacacatct tacttctgct
      541 ctgctagttc tctgttatgc ttttcacatg caggaagaaa gagtaaaagc ataacccaat
      601 tgaataaagc agcatggcct gctattcttt gcttatgaag catcacatga tcgacaccaa
      661 attaagaagc accccccacc tgtggttaag tatgtatgca actgtcaagc ctttttctat
      721 agtatagaag gaattccgcc atccccttcg ctgccagagt gcaggagtat gttaaaactc
      781 ttaatgtctt accaaagcaa cttttgaata atctggtggg tttacctcat ttaaataaaa
      841 tcaaaaatgc tgctccccaa tctattttga aatgctccag cctttcaaat ctcttgctct
      901 gatatatgaa aagaaaacta atctgaggtt ctcct
//
LOCUS       KCKM01000061             834 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 963apa ultra-conserved element locus
            uce-6842, sequence.
ACCESSION   KCKM01000061
VERSION     KCKM01000061.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 834)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 834)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..834
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="963apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>834
                     /note="ultra-conserved element locus uce-6842"
BASE COUNT          240 a          156 c          145 g          293 t
ORIGIN      
        1 aaatcctgca gtcttgcatc ggaaggactt ttagtcccac aaaccaagtc ttttccacct
       61 ccaatctgca tctctatgac agtcaacagc attattctga aagagtgtat atgcagtctg
      121 tttcccaaga agcatgtgtt aatacacatt tagatctatc tatcctgcta gctatagctg
      181 tatctaacca caataaaaca ctcgagctct ctcaagtgtt atgcctttaa gttaaacttt
      241 attgaaataa aataaggaaa gaactatata ttttgcattc ttcagaagcc agtgttcaat
      301 aaatactaag ttttgatcga ttgatacagt gtcatatttg actaaagagg tgggaaagtt
      361 gctactgttg ctttgtgctg gctagaagaa gaatgcacta ttgattttat atgttggatg
      421 ggctgtcagc gtacagtgca ttgttgattt tgacttttat agccaacatg tttcctttaa
      481 ttggatcatt tgtaaaagag aggagggtac ctgttctctt ctgacagtga ctgattacaa
      541 tcatttcatg tttgtcaata tttgataaac ccacggttac ccaacaacat ggctgaaagc
      601 agcatcttta tgcatttact tgtttcccct atttcctgct tttgatttca gcctcagtat
      661 aaccagccag ttgtgctagc agctccttct tcatcttttt tttttctctt ttactgaaac
      721 aattttctta tgttctcact ttttgtagag gatgataaag agagtgagaa agagagaaag
      781 tttttacttt gagtcaacat cattgccaat atctctcggt aatagaaaaa ttct
//
LOCUS       KCKM01000062             894 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 979apa ultra-conserved element locus
            uce-4963, sequence.
ACCESSION   KCKM01000062
VERSION     KCKM01000062.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 894)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 894)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..894
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="979apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>894
                     /note="ultra-conserved element locus uce-4963"
BASE COUNT          304 a          163 c          157 g          270 t
ORIGIN      
        1 aagttaaaaa ttacctacct ttaattactt cattttgaaa agagtgacct acagcacaca
       61 tttttgaact tgtcagacct aatagttttc tttaaatcaa atcagaaact cagtcctttt
      121 tgggctactg cgtaatacgt gatgcaatga acatgcattt ttccatacag ctaataggag
      181 aatcatgtac tgcctcttct ttaaagaggt tacttagttg taggggaaga gacaaaagaa
      241 agttgctttt cagatctaat ctttgttatc tccgttttcc acatttacag tcctcacggt
      301 cttacctgct ctcaccaggt aatttccagt tattcactag tttcccttta gcctcaataa
      361 ggaaatcttc aagtaaggtt agtgcagaag attaagactg cattaagatt aagtctgaaa
      421 tgttctgcta ccaattagcc ctctagtatt tctgtaagcc ttgaattttt gatgcgatca
      481 atgacaccaa gtggagccat cttctgtgga gtggttatta aagatataaa aatcaataca
      541 aagatgatac ttggaaatct atatcacaag ataatgaatc accatgagag ccagctaaga
      601 aggaatgtca gcaaaccaaa cagaaggttt gtgcataaca aattatttga tgccagtaga
      661 gtttaagcta aattttgcat gagacagaag tcttcaggca acacttatga tacatttgca
      721 tggcaaggtt ttaatgagat aaagacaaga ccaaccatgc acaaggcttt ttgtgcacta
      781 gagagacaca agagtaagag atgattgaga catacgggat caaggcaata atgctataat
      841 ttgactttaa tgacaaaaca ccatcaaaaa ctttctacat cagtaatcct catt
//
LOCUS       KCKM01000063             611 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 994apa ultra-conserved element locus
            uce-2651, sequence.
ACCESSION   KCKM01000063
VERSION     KCKM01000063.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 611)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 611)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..611
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="994apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>611
                     /note="ultra-conserved element locus uce-2651"
BASE COUNT          165 a          128 c          161 g          157 t
ORIGIN      
        1 atgtttagtt tgcttttttt gctacggtaa catttactgt atgcttcaag taccagttca
       61 aagatgttgt gtaactattg gtcagataaa gttgttacat caagagaatt caccacatac
      121 gacaacaaaa atgcttgccc ctagcacatt tcacagcttc aactgctaca gactgtcact
      181 ggaaaaaaaa attaaaagta aaaaaaaaaa agaaataaaa atgcatcggt cagtctgaac
      241 catgtcaagt aaactatgga agtagcatat ccacaacaca aaccgtgcta gcactttctt
      301 ttcaagtcta accccaagaa ccaggtacaa ttcaggagcc gctgactccg ctctgtggaa
      361 ggtggtggat cgtggcggtc ggacaggtcg gaggtgtggt tttacagtac attctggtgg
      421 cccaagccgg gtttccaggc agagagctgc gcggccggtc ctgcagcatt agcgacagtg
      481 catggacgtt actggggtgc agcttcagta ccggtgtgtc tgatgcgagt actgtggcgg
      541 ctgctgggag gtagttgaat accccatgct gctctgtggc tgggatgtgc ttggtccggg
      601 gttggggtag g
//
LOCUS       KCKM01000064             418 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1010apa ultra-conserved element locus
            uce-185, sequence.
ACCESSION   KCKM01000064
VERSION     KCKM01000064.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 418)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 418)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1010apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>418
                     /note="ultra-conserved element locus uce-185"
BASE COUNT          153 a           45 c          107 g          113 t
ORIGIN      
        1 aaaaaagaaa gggaggggga ggtagaaggg gtagagtgga gaaaggagag gattaaatag
       61 aacagtatac acttagtata gccagcaaaa ttgaagtcat ttactggaac gcttttaatt
      121 tggtttaaac aaaatactct tttgtatatt caaataggga gtagctcagc tgttgtgaag
      181 ccagaaaatt aatggtattt ttagtgaaat agcaaaagca tgtcaacaac atagctgtgg
      241 atgataatgt tggcatttta ttcatgagga attatcaatg caggttactg gacaacatag
      301 tgtgactgga atgattgagc acaggaggga agcggctgtc cttctgtaag atgatttcat
      361 tttgcattta gtctttcagg aagagaagaa ggagagagaa agaaagcatt taaaaata
//
LOCUS       KCKM01000065             467 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1026apa ultra-conserved element locus
            uce-3349, sequence.
ACCESSION   KCKM01000065
VERSION     KCKM01000065.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 467)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 467)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1026apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>467
                     /note="ultra-conserved element locus uce-3349"
BASE COUNT          165 a           64 c          126 g          112 t
ORIGIN      
        1 gagaactttt aaaaataagt aatggaattc cgtctctgtt atgcttttag tagtcatttc
       61 ggccatggtg cagcgaggtc ataagctgag ctcagtgaag ggagccagaa cacgaaatga
      121 tgctgagaga acgtctggga gatgagaggt acagaattac aagcgaaagt gcaggcctgc
      181 tgaggcaatt acagcttaat ggggtcattt ggaaggcaat tgccaggggt taatgtagta
      241 tggagagatg aggtgagatt gaagtgaaat ttggggctgg aaatgtgtta agatgaaaga
      301 tcagagtgca gcggattctg cagtgcagaa ggtttatatc atgcaaaaaa tctgaaaaaa
      361 atgtaaaagt agtagccaga tgtttcaaaa taaataaata aaaccttaag caaacgcttt
      421 aaaaaagtga aatagctgca tcaaaatgcc ctgcgctcag aaaggat
//
LOCUS       KCKM01000066             895 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1041apa ultra-conserved element locus
            uce-6448, sequence.
ACCESSION   KCKM01000066
VERSION     KCKM01000066.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 895)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 895)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..895
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1041apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>895
                     /note="ultra-conserved element locus uce-6448"
BASE COUNT          264 a          132 c          200 g          299 t
ORIGIN      
        1 tgatcagatg gctattattg catgttagga gggtggaaat aatagaataa taaaaaactt
       61 gtagtggata taccagagag taatgttcat ctatagatac taaacagcaa tggatggctt
      121 tgtagtgaga ggacctggac atgttggggg gtgatttgct gcctgatggt gttttatcag
      181 tatatatatg cagggaagga gggttacctt tgcggcagtg gtgttgggtt tttgcttgct
      241 acggataacg ggtgaactgg tgtatggaag catcttggtg actgtttaat gatgacttgg
      301 tgctgcttat atagaatccc tcccccaccc accacaaacc ttttcccagt tggggctgga
      361 ggaaatgagt aatgcttaac ccatttgtgt gatcaattca cttaagcagc tactgtgaaa
      421 tgttaatcac aactttaatt tgtactgcat tagcattttg attaacttgt aggcttgcta
      481 gcacacttga agcactttta ctcatagtta cagctcggaa atgacttttt gattaattaa
      541 gtttgttaga cagcagctga gcttcctgaa tgctaacctt atggggctaa aagttcagga
      601 gaaagttact gggaataact gttgctgttg aaaaggattc ttgtgaatgc actcaaaaat
      661 tcttaattat tgacaaaata ttacattact actttgaaac tgactaaact ctaaagagtg
      721 cagatttatt atgagaaaga tgttgtgtat ttttcatggg tttggtagat tcatgcaaaa
      781 tttggaaaaa atgccacctt caagacattg tttgtgttag gaaactgatt tcttgccaag
      841 atttttatca aatacatttt attgtattta tagttcacta gcatagtaca gagta
//
LOCUS       KCKM01000067             757 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1056apa ultra-conserved element locus
            uce-4786, sequence.
ACCESSION   KCKM01000067
VERSION     KCKM01000067.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 757)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 757)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..757
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1056apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>757
                     /note="ultra-conserved element locus uce-4786"
BASE COUNT          220 a          153 c          171 g          213 t
ORIGIN      
        1 ggggagaaaa caagactctt tatggggaaa aagtgctgga agttgcagca gcagggctga
       61 gcttgatatt aggaaaaaat tcaactacgg tttaagatac cattttccac aggtttgatg
      121 tgaccactag agagcaggct taacctagta acgagagcta attagttctt ggcctcttca
      181 tttcctcctc ttccccaacc cccctccacc tctccatcta ggcagagggg acttcgatgg
      241 ttcctggctt tgcctccaac gctgcgcaat cttagggcta attaaaacac cacagacggc
      301 ctgaacccca cattaaaatt tgatgaggaa ttgatcagcc aagcaaacag gaaatttagc
      361 tgtgtgaggg aaggtaatgt ttgctcaaat gtgtaatgag gtccatgggg aatatttatg
      421 gggaccttag tgacggtttc agcagttcct tctccttgaa gtcatcttac ctacctgccc
      481 ctctccttcg tgagagtgta ggcataagga aatccaaagg agcatcagat gttttggaaa
      541 atggattatg tttggctaag atggtgccat gtaaagcttt gcagaaggag ttgtggaatt
      601 gcagactgac tcttttgcag ttttgccttt gtgcttaaaa aatgatacta aaaaaatatt
      661 tcccataatc caagtaactg cgtagtaaaa tttctactga aactccttgt agtatgttag
      721 caaactaaat agtttgctca aaaagaattg ggcactg
//
LOCUS       KCKM01000068             646 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1072apa ultra-conserved element locus
            uce-6791, sequence.
ACCESSION   KCKM01000068
VERSION     KCKM01000068.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 646)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 646)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..646
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1072apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>646
                     /note="ultra-conserved element locus uce-6791"
BASE COUNT          184 a          133 c          143 g          186 t
ORIGIN      
        1 atatttcccc ccactcgcat acggtggatt ttttccccgt ttttggagga agacagcgga
       61 gcaacgacaa tctggattgc cgcgtttcgc ttccaaacca aagctctcag ttaacacacc
      121 ggcttggtac gccagcagat gccgtctaag cctttaaatc gcacactaat tgcactaatt
      181 gagctaacag tctctgtttc gtctccctac cctgagtcaa ccagcgtctt ctggtactgc
      241 tgtagagatc caagctgttg actgtagtgt tattttgtca gccattaaac gattcatcag
      301 agtcattaat tgatttatta ctgctgcctg tgagtatagc tttgcaaata aagaaggatg
      361 gaggtcagga ggcaatggga attggacaaa acagcacagc caggagttgg gcacttgaat
      421 tatcggtagg aatctgcttg tgcaggaccg ctggcatcaa gctatggggg aaaaaaatta
      481 gggaaaaaaa gaaaaaacaa agctgtgctg ttcagctgca ctgccaaatc agctaggttt
      541 ttcagttaaa tctatgtagg atataaaagg tctattaaaa ctgtcttgtt ttcttaacct
      601 aatccttagg aagaaaccag gttatttcgt tgtattaatt atgttt
//
LOCUS       KCKM01000069             939 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1088apa ultra-conserved element locus
            uce-3630, sequence.
ACCESSION   KCKM01000069
VERSION     KCKM01000069.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 939)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 939)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1088apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>939
                     /note="ultra-conserved element locus uce-3630"
BASE COUNT          295 a          166 c          196 g          282 t
ORIGIN      
        1 attcttgtaa tgtcagagca aaacacttga tctcaaacat cttggttaat ccaagatcca
       61 aaccctgtcc caggcttcac agctttagct catgtagcat tctgcttttg tccagagggt
      121 gctaccaaga aaacacttgt aatgtcatta atcctaagat gtgtttttaa ttgtaacaga
      181 agcgtagtgt tgccagaggt aaatggaaga taacagaagg aatattctgg tagacttcac
      241 tgtggttttg ctagactcat ttttgaggct cagctccagg cagaggttgc acggctggtt
      301 catagcacag aagggacata ctgcactggt ttgctgcaga gcaaagaaaa gtggttaact
      361 tcgcgtatgt ctgcacttct gtctctgggc agtgtgctca ttgttgaact ggacagctat
      421 catggaaaga ccactcattt tcttcccatg ttctttaact gtagtcacat gtggccaagc
      481 taaacccccg cagtgcaact gttttttcct atttacacat gttactaaga aacatcagct
      541 aaggagatgt tattacaagt ttgggaatga cccaattctt ggcacagggc caagccaaac
      601 attttatttc atttaaaaaa gtaaaatgag atagactcag tagttataat tatgattggc
      661 aagcagaggt ggagtgctac tatgaaacag aaagatggga aatttaaata attctaatta
      721 ataagtatag tcattaattc catcagtggg ataaacagaa gtgtcattcc atcctgagaa
      781 tagtttggcc aggaaggggc acaggagaca agctgtaaaa aaaggttgat tcattgatca
      841 aggcaccttg atatgataaa gatgttaacg ttgtgatttt tttaaaagct cgtttttctt
      901 agattcatta agctttatgt ctataataaa acaaataaa
//
LOCUS       KCKM01000070             671 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1103apa ultra-conserved element locus
            uce-6497, sequence.
ACCESSION   KCKM01000070
VERSION     KCKM01000070.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 671)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 671)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..671
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1103apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>671
                     /note="ultra-conserved element locus uce-6497"
BASE COUNT          202 a          100 c          110 g          259 t
ORIGIN      
        1 tttttaaagg ccactaaagc tggccaaacg tgctgagttg aaccatacgt caacaaacaa
       61 atactgctaa ttccaactct tgtttttatt ctctgagaaa tggatggttt cattacagga
      121 tttgttgggt caccttaaaa attcccggtt gatccataat gctgcaactg atggatttac
      181 aacaaaatcc atatccgtta ttttacgtac attttgttgc ttaaaaagaa tatcttaata
      241 taacagctga tactttttaa atccacattg aaacaactgt tggattttta tactgttgta
      301 aaactctttg tagggtattc atagaaaatg ttttattaat tgccatatgt ttattgattt
      361 ctctttcatg ttggttcttt tgttctttct ttgtagtggc aaaagatctt tctgcatcat
      421 catttgcaag ttatctaaaa tgtcaaaggt gttcttttga agtttattat agatcacatg
      481 ctgtacaggc cttgactttg gcatatttac aaaaaagtac atactttgaa agctcagaaa
      541 gagattgggg ctgcattagt taaaaaaagg atgaatattt tcctactttt tccttttttt
      601 attttatatt taagaagaat gtaaacagtt ctgtgttaga aaaagtgatg cgtcaggtaa
      661 tttttgtttt c
//
LOCUS       KCKM01000071            1048 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1119apa ultra-conserved element locus
            uce-6007, sequence.
ACCESSION   KCKM01000071
VERSION     KCKM01000071.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1048)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1048)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1048
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1119apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1048
                     /note="ultra-conserved element locus uce-6007"
BASE COUNT          343 a          174 c          210 g          321 t
ORIGIN      
        1 tcagaattat tgattttgtg caactctttc ctcacaggat ggcaatggct atatcagtgc
       61 ggcagaacta cgtcacgtta tgacaaactt aggagaaaag ctaacagatg aagaagtaga
      121 tgaaatgatc agagaagcag acattgatgg ggatggtcaa gtcaactatg aaggtaaaaa
      181 agatgcttgt cttgactcag aagcattact cagcttgagt ggaagctgtt ggctagggta
      241 ttaatttcta gtacttggtt atccgcttct gtggacaaaa acttagatgc agtgaagggg
      301 ctttcttgta tcaatttaag agacttggca gttgaagtac tctggagaca ataaatcaca
      361 gtgacttttt gtcttttcag aattcgtaca gatgatgact gcaaagtgaa gagacctcct
      421 ttacaccttt tttcctctag aagaatcaaa ttgaatcttt tacttacctc ttgcaaaaaa
      481 aatgttcatt tattcattct gtttctgtat agcaaaactg aatgtcaaaa taccttctgt
      541 ccacaaactg catgtaatgg ttggtggtcc tgtccccaaa agataaagtt aaacatcagt
      601 tttacaatat aaataattgt actaccttga aaataaaaaa aaaaggaagc acttagtgaa
      661 ctcaaaagtt ccatttgcta atgactatta cactgtttgg gctggccagt ttttcatgca
      721 tgcagcttga caattgagca cagtcagaca tttgtattaa aaaggaaaaa acaacctaaa
      781 ggatccactc ttttgttcaa cagtggattc tagttcaatt tgtagtataa attgtcatag
      841 ctggtttact tcaaaattgg tttatacctc aggatggtat gcagcaaaat ggttgaagga
      901 tgcaaaactt agagaaaaat gccctaaagg ttgaatggtt ctcctgtacg tagcagtgtg
      961 ctccaaaaat acgatgatct taactatgga tggcatgtct gttaaaatac tggtttaaca
     1021 ttgtctgcat tgcactatag tgaaacgg
//
LOCUS       KCKM01000072             963 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1134apa ultra-conserved element locus
            uce-2491, sequence.
ACCESSION   KCKM01000072
VERSION     KCKM01000072.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 963)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 963)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..963
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1134apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>963
                     /note="ultra-conserved element locus uce-2491"
BASE COUNT          276 a          228 c          264 g          195 t
ORIGIN      
        1 aataaggatc aagttttcca aaggttgtct ggcctcaatt tacgtatccg tgataaaaag
       61 ctgacatcat tcccgtgacg cagacacctc ctggggaacg ccacacaaca cccagccatg
      121 acaaaaggtg ggtgaggcgg tgtggcaggg acagcactcg catttccctg tggctcctgg
      181 tgctgaatct gccgtgtgtg gtctgtgcca acaacctggt actccaacac ccaggacagc
      241 ttctccacct cccctggctg ctccttctcc aagcctcccg gcttcccttt agaaaaacca
      301 acggaaggta gtgatttcca gcagagctgc tggtggtgct gtacccttag caccatttaa
      361 atgtccgatt gcactcattc agcccctgaa aaaaccagcg ctcctccagc ccgtgacagc
      421 tttgacagcc agactcctta attccttttt cttattccct taatctgtca tctttatcag
      481 gctggggaag tgccaggcag catgcaggag ccccggcccc gatcaatctc cacattacag
      541 ctgacagaat ggtgctaata acttattgat ctaatgtttg ccaagcccca ctggggctga
      601 aaggctgcca ttgattggct tgagggaagg agcctctcag ctgagaggaa agccttcaaa
      661 ttgtcttctt cccgaggagc ctggagatgg agggagggtg gggaagggag aacagggagg
      721 aggacaaggg aacacaagag aggaagagga atggaaagga agaagggtgc ctatgcgagg
      781 cgggggttaa gaatggaaaa ggaagaggga gaaaaaagaa ccaaagaaat gcaaggagaa
      841 ggggaaagag caggaaaggg gagaagagca gagcgacgaa aaagaattga gaacaaaaag
      901 gttgtgccga gctgaaaaat taatgaaata ggcagttgac cctcttcttg ctcacagcaa
      961 atc
//
LOCUS       KCKM01000073             927 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1149apa ultra-conserved element locus
            uce-760, sequence.
ACCESSION   KCKM01000073
VERSION     KCKM01000073.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 927)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 927)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..927
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1149apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>927
                     /note="ultra-conserved element locus uce-760"
BASE COUNT          297 a          165 c          144 g          321 t
ORIGIN      
        1 agatttacag ctgccataac agaaccccgg ggtcttctcc gtcattagtc gcaaaagcaa
       61 attagactat gacaccacat ggtgaattga cccagactcc gccccacata aagaagtttt
      121 aaaaaaatac caaaatctta atatgtataa ttaaattaat catcataaat tactttttag
      181 catggagagt tagatttata atatcatttt caaatctcta tgtgaggttt aaatatttta
      241 tagcatatgt gagttagagg gaaatgtgtc taatggctta aatatcactg tagagcagta
      301 gactttgaca aaaactgtag cacaactgtt tctaaggtag tttgtaaaaa ttatttattt
      361 ccataccagt taattatgat gggagtcttt gttgaatgca caagcattaa aaaagtgctg
      421 atattttatg catctttaac tgtaacgtgc ttccctgcag cgcattggta actccttgac
      481 atttaacatt cactcacagc aactataata aggggtttga ttgcttcttt tgcagatgca
      541 gtaatttaat aactgtgatc agttgcataa atttactata caaccatctt aagttagcca
      601 cattaaaatt aagcaaaatt gtaatctgtt gacagattat tgctcctgaa caattctact
      661 aaaagcattt cagattagct tgtgccacaa gcatttttgt tttataagct tgtaaaaagt
      721 actgctgctg gtttttgctt ccaatcttac tattagacaa ttacatgaaa tttgatgctt
      781 tctgtaaaat cacctgaact ggactgattt agttatttat tctgcattat gttttgaatc
      841 ctgctatttg aaaaatatca gtttgccagt tccttcaccc tctcgcccag caattcccgt
      901 ataactttgc atcagatact tctgaat
//
LOCUS       KCKM01000074             391 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1164apa ultra-conserved element locus
            uce-6947, sequence.
ACCESSION   KCKM01000074
VERSION     KCKM01000074.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 391)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 391)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1164apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>391
                     /note="ultra-conserved element locus uce-6947"
BASE COUNT          154 a           57 c           68 g          112 t
ORIGIN      
        1 tatcaattaa tataggcaaa gaggacccat aatttataat taactggcaa gtggtttgta
       61 acaaacagca gcactgaatc taatagccag tagaaaaata actagtgttg atttgtccct
      121 cggcaaatta atagagtgct tatcaatgac agggttacat aaaactgcta aataaataat
      181 catcagtgag ttagagtgaa gcagatcttt aacaagctta atctgaacct cttgacatct
      241 gtagactatg aagagattaa atgctaagaa agagaagata cactacacac attgtaagca
      301 tgctcagtag ctgtgcaaga tcatgttctt aagtaatgag aaataaggaa acatttttat
      361 tacaaaatta cattgaaaaa tgattttcat t
//
LOCUS       KCKM01000075            1147 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1178apa ultra-conserved element locus
            uce-3530, sequence.
ACCESSION   KCKM01000075
VERSION     KCKM01000075.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1147)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1147)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1147
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1178apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1147
                     /note="ultra-conserved element locus uce-3530"
BASE COUNT          325 a          224 c          247 g          351 t
ORIGIN      
        1 tctccatagt gtagaagtgt tacagtttga ttgttgtttc tcctgaaaca aagaggcttc
       61 cttgcatcct tttcactata atatcctgat aggtgttgcc aattagaagt gagatatttg
      121 acaaaaacct aagaatatca aaactttaaa taatagttgc agctatcttt ttctatattt
      181 gtgaaactgc agttgttttg acgtttttta aagtagcttg ttattttcct gatactgttg
      241 acgtggaggc attttaaacc tagttcagta actgaaaata aagataatac atttaaaaag
      301 aaatgggact cttagaaaaa agtccaagtc aaacatagcc atatctaaca taacatgtta
      361 atcttctgca gtagggtgga acttacaatg catttataga atccttaaaa atattttgga
      421 ctgtattctg ttgttgtggg gtgtttttgt ttgcttggtt gttttttttc ctgagcaaaa
      481 ttgtctgtat tgctgattgt tgttctattt ttcttgcaga gtaacagcta tccaccaatg
      541 tcagacccgt atatgcctag ttattatgct ccatccattg gatttccgta ttctttaggc
      601 gaagcagcat ggtcaactgc aggcgaccct ccaatgccat acctgacaac ttatggacag
      661 atgagtaatg gtgaacacca ttacatacct gatggtgtat ttagtcaacc tggggcatta
      721 ggaaataccc ctccatttct tgggcaacac ggatttaatt tttttcctgg gaatgcagac
      781 ttctctacat gggggacaag tggatctcag ggacaatcaa cgcaaagctc tgcttacagc
      841 agcagctatg gctatccacc tagttctctt gggagagcca tagcagatgg acaggctgga
      901 tttggcagtg atactctgag caaggtgcct gggattagca gcattgagca aggcatgact
      961 ggactgaaaa ttggtggaga tatgacggct gctgtgacga aaactgtagg ttcagctctg
     1021 agcagtacag gtatgacaag cattgcagca aacagcgtgc ccccagttag cagttcagca
     1081 cctaaaccaa cctcgtgggc tgccattgca aggaagcctg ctaaacctca gccgaaactc
     1141 aagccta
//
LOCUS       KCKM01000076             828 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1193apa ultra-conserved element locus
            uce-6532, sequence.
ACCESSION   KCKM01000076
VERSION     KCKM01000076.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 828)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 828)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..828
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1193apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>828
                     /note="ultra-conserved element locus uce-6532"
BASE COUNT          260 a          114 c          157 g          297 t
ORIGIN      
        1 gtagcctcag ttactgataa aggaaaaatt aatgttgttt tcagagaaga aaaaaagtaa
       61 aaattctata catttcatta tggaacactt agattatttc catgacaacc atataataag
      121 attcatgttt actttgtttc tgagttctca atgtcttttt aatgacttct gtgtaattaa
      181 aacagaatgc ataatttgag gttacgtaat ataaatcagt tttgtttgca tgatgttgaa
      241 tagtgttaat acatgtacaa tttgctgttt aagagcctca catggattta ttcatttgtt
      301 gcagaactgt gagaaactag aaaataattt tgatgacatc aagcacacga ctctcagtga
      361 gcgaggagca cttcgagaag caatgaggta agtctgggtc accatagcaa cagtcacaga
      421 tgtggtaaag aaagagtcat tcttcattat tgggggaaca aatgagttca ttgccaccat
      481 tcagctctat tctctaaggt attaatttgt cagtggagag gcttcccttg aggctgtact
      541 ttggttttga agctgcataa atgttaagcc tgactgcaca gtaaaaaacg taaatgttta
      601 atttgttatt taaaatgctt aaggggtgcc ttgctttata tttgtactaa actgtgagtg
      661 aatgaaaata ttgttcatct aaattctgta agtgttaaag caattgtaca attctgtttg
      721 aacaaaccta tgttttcctt ttaaattaga tctgattttt atgtatgtag ttgctgtgtg
      781 ttctgatttt atcaccagat ttacatgatt ttggttttgc taatggaa
//
LOCUS       KCKM01000077            1019 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1209apa ultra-conserved element locus
            uce-7117, sequence.
ACCESSION   KCKM01000077
VERSION     KCKM01000077.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1019)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1019)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1019
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1209apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1019
                     /note="ultra-conserved element locus uce-7117"
BASE COUNT          288 a          227 c          193 g          311 t
ORIGIN      
        1 ttacctggca gcctctctgc ccgattccaa gctgcggtca tgtgaaggga agcacctcct
       61 ccgctcaccg atttcttaaa atggtcagtt ctgcatcctt cttagcaagt caaatcctgc
      121 ctatcggcct gcggcttaga tttttttcaa aggtgttggt acctaaccct agctctgctg
      181 cgatgaccag agttacatcc aggggtacgc acagggaggg aagttgctaa ataatgtcat
      241 taagaatcac tgcacgtgaa ataaacaatc aggtgtcttt ttattttttt tttttccata
      301 ctggtttagg tttaattaag aattcctcag ttacaactct gtagttgtca aggtctgaga
      361 gactcttgga aaacttgtgt ttcagtcttg ctggcccaag cataataaaa aaaaaatacc
      421 cagcctgaat cgaattttta tgcttagttc acggtagatt tcactccatt ctcatgtaaa
      481 cagcttctac gaatcaacat atgtgtctgg gtggtatctc tcactttgtt ttgtaacaaa
      541 aagccatatt gcatcattta atttgctcaa gtcatgcaaa taggaaaaaa tcaataggac
      601 aaaaaggggt cgacttatcc tcctccccac taaactgctg cccacacaca gagtcctgtt
      661 gcttatggca aaagaataac aacaacacca ttgtgtttgt tagttggttc actaatgggt
      721 gaaactggag aacatcattc tccttcagtc cccagctctg tccaaatgtt catgcctttt
      781 gagggagcat ttgtcctacc ccctctattc ccagatgagt gagaactgtc ttgctgcagg
      841 ttttcagctg cagatctctc tttattcata ccatatgcag cagcagtttg agattcaggg
      901 cagatatatt tcttcatgtt gtctagagac agtgtcatta agctcctgtg taataattga
      961 attacactat aaactaacca cacacagata acctgaaaga tctagctgag aaaaagaaa
//
LOCUS       KCKM01000078             378 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1225apa ultra-conserved element locus
            uce-2788, sequence.
ACCESSION   KCKM01000078
VERSION     KCKM01000078.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 378)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 378)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1225apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>378
                     /note="ultra-conserved element locus uce-2788"
BASE COUNT          138 a           63 c           78 g           99 t
ORIGIN      
        1 ggtggacatg tgatagcttt ctttttcacc aatcagtcat gccaagagaa ccttatgtat
       61 tttatacaga aagtagaaaa aatgataatt tgaagagatg agaagatggt gcagggtaaa
      121 agctgatatt cttcctttat aacagatagc cccaagttgt agaggccatt atttcttgca
      181 ttttcagagc aaatgaactt gacagatggc tgtgtcacct aaacccctac ctaccaactt
      241 gattatgcag aaaacaatac aatagaaaag aaatcattac tgaaggaacc tggttagtcc
      301 acagagggct gagcagtgca gaagaacaaa attacagttg tggaattgaa cagcaagaat
      361 acatttaaca taaagtgg
//
LOCUS       KCKM01000079             983 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1240apa ultra-conserved element locus
            uce-6101, sequence.
ACCESSION   KCKM01000079
VERSION     KCKM01000079.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 983)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 983)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..983
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1240apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>983
                     /note="ultra-conserved element locus uce-6101"
BASE COUNT          317 a          202 c          172 g          292 t
ORIGIN      
        1 cttctcacac tgttccagct acctttttgt gaaaatatac ttcaaaagac atgtgtgcac
       61 tatagagaga tgtctgcact atatctggca tatttttgtt ctaggaaaag aaaaaagaca
      121 gtgtcagttt aaatctctgc ttcttcaaat ttcactgctc ttaaacacca tgcagtatct
      181 cttcaggaga cctgaaccta tttttttttc tcctttgcag caagtgtatc attaataaga
      241 gcaagttaga agtgctttgc atttcatctt tttgagaatt catccactgg tgcatatata
      301 actgacagtt aaaattagac atatattaaa atcagttact gaagaagtcc tctgtcttcc
      361 actgtaccca aagcttgtaa tggtctgaaa ccagctagaa tatacagtaa ttgtcattca
      421 gtgagagtct atcctagaaa gtcatgcttc agtggagaag actgagtttc catttgaaat
      481 caacaaatta atccaagaca ggtatctgaa agggcaagtt taataggaag cagctactgg
      541 gctctcaacc atgataaaat gttattgctg tttccctgta aattggctgg gaacatatga
      601 tactctctgc ataagagctc cattgctgtt caagagatat actgctcaag ctatcaaaat
      661 gatgacagtc tgccagtccc cataacaact tgccattgga cgtggcaaga gcttgtgcat
      721 gcgcgtgtga atttgcaatt accaaaatgt tcttctccct tataagcaga aaagaagtcc
      781 atgtgttaac tgtacttata acagagcaaa accaattgct tccctcaaat caatgcgtct
      841 tcaataacat tcctaatgaa ctgaacagca gaaactcagc aacggacaca tatacacgca
      901 cacacaaaaa ggttaaagta agatcccttt gagacactgc tcaaaactca ggttttgctg
      961 agctttgata aaatcacgta ctg
//
LOCUS       KCKM01000080             579 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1255apa ultra-conserved element locus
            uce-2023, sequence.
ACCESSION   KCKM01000080
VERSION     KCKM01000080.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 579)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 579)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1255apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>579
                     /note="ultra-conserved element locus uce-2023"
BASE COUNT          188 a          115 c           81 g          195 t
ORIGIN      
        1 ttcaacataa acaactcttt ttttgttaga ataatgacat acagtttatt cttttatact
       61 atgcagcact tggggaccac atccatttac caaaataata ccaaattagt actgcaaata
      121 ttgaaatcag acctttcaga ctaaccagtg gcctaatttt ctcttcaatc tgctcttaat
      181 ctcaattcat caataacact gccttattat aggactttga cagcgagcta gagcttttga
      241 taaattatac atctcaagcc agatttaaaa tttgaagctc aagtgctaat tatctgtaca
      301 ggcctagtta ataacgagat ttcttgttaa gtatctgatc acagcatggg catcatttgt
      361 caagaacctc aagtctacct tggagactag ctcttcgaat tctcccttgc ctaccatatg
      421 taaaattggg atctttgttt ctataataac cttttattag gaagctgaca taatgattaa
      481 gttcgctgta gacacataca atgagttaga caattaccct tgctgcttta aactactcag
      541 gctcctagca agacaaaata attaatattg aattttaat
//
LOCUS       KCKM01000081            1035 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1270apa ultra-conserved element locus
            uce-7362, sequence.
ACCESSION   KCKM01000081
VERSION     KCKM01000081.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1035)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1035)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1270apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1035
                     /note="ultra-conserved element locus uce-7362"
BASE COUNT          338 a          221 c          199 g          277 t
ORIGIN      
        1 ttgctttatt cacaatactc tttagctgca gcagttttga gacaagcaac accatcattt
       61 caccccacat gctctctgag aataaggctt tctggacagg gatttgagca gctgctgtgt
      121 agcagagaat aaaattcagg ctgctggagg gggaggagaa aaggggcaac aaacaacatt
      181 tgtttaaaat ctggcaagag catcctaatt agatgaatta ttggatggat catcaggact
      241 gctcccccaa gtgccatagg acaggagagc ccttagagga catgttgagt taagactgca
      301 aaaatgattc caaagagcac catcactgaa tgcagaacac taaagcctca tttgtctcaa
      361 aaatcaccct tcccacacag cgtcattgct cacttgccac atatatataa aggctgtaac
      421 agttaatcat ttagacaagg ataaatattt attcagggac taccttaacg ttgaatgtta
      481 tttcctccat gacgtaaact cgttcaggaa atgctttagc cacctcctcc acactgttaa
      541 aatactgcac tggctcctta atatctcggt cttgttccag cagcttaaat tgccctgaaa
      601 acagatgata aacagaagag ttgtaagata tttatactgg acaactgtca ctgtggcaac
      661 tgctggctca acaacttcac cattttgctc ggtcaatttt tccggttatt agcagccaaa
      721 caagaggaca agagattgca gagggtctct tgaacctgcc atgaaagaca gtttcaccag
      781 gtcggaatga aaagaacgtg tgggagccga agttaaatta aaacagatcc tttaatcaca
      841 tgctctctag aaccagtaaa caactatgga ggcatttatg tttgtgtact taatttggtg
      901 taatagtatc tgtacagata gcattttttg cctcttaata ttaaaagcct cagagaaaga
      961 aaacacaccc attactataa aaccccaaaa caataaacac aggggttctg ttcatagcat
     1021 catcaaacag ctatt
//
LOCUS       KCKM01000082             375 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1285apa ultra-conserved element locus
            uce-2435, sequence.
ACCESSION   KCKM01000082
VERSION     KCKM01000082.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 375)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 375)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1285apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>375
                     /note="ultra-conserved element locus uce-2435"
BASE COUNT          113 a           61 c           76 g          125 t
ORIGIN      
        1 aaataattgc tggctaacaa atagcccaga aagcaaacta gcatgaactc ttcaacacct
       61 ctccaaattc aacaagactg acatttatag ctttattgta gcagagacat ggcatttgga
      121 ttcagattgt ttggactgca gagtgtcagt ataaatagct atgattgact tttgtatgga
      181 gcacatctgg aagcaattta tgacattcca gctagattaa agcatgtttt aaaggcattt
      241 caccagtctt tttttttctt ttttttctgg ctatggtgaa taaagtttca aagacgcttt
      301 agctgctgtt tctgttaatg tggaccatag tgaagtcaaa ttaagggcaa ctggggaaaa
      361 tggtgcattt gtttg
//
LOCUS       KCKM01000083             514 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1300apa ultra-conserved element locus
            uce-4952, sequence.
ACCESSION   KCKM01000083
VERSION     KCKM01000083.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 514)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 514)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1300apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>514
                     /note="ultra-conserved element locus uce-4952"
BASE COUNT          156 a          110 c           79 g          169 t
ORIGIN      
        1 aaaggagtta tttgaggcat gaatgtctcc cctaaagctg cagcaatcat gtggcattag
       61 acacttccgg aatcctatag ccaacttgaa aaatcccaga cccccttttt ccctaatttt
      121 tgctctgatc tgtaatttta tccacatttg cactagtttg agcattctgg ctctcccatc
      181 tgaaagcctg caattactat ataattcttc gcaatttcac atgtcctaat atggactgta
      241 atttttgcgc aagacaattt cctgctattt caagcatcaa cattgtcaaa gttgtatgta
      301 cataataaat gggaatatca atgcatagtt tttagcataa catcttgact cctcgataat
      361 tatatccgtt cggagcctac gcagaattag cctgaattgc atagtaactg ctgctgcttt
      421 aaaattttta aaaattactc ataattttcc caaagattac caagatctcg agtgcacaat
      481 gtcatcagcg taatgaagag taaacattta tgct
//
LOCUS       KCKM01000084             915 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1330apa ultra-conserved element locus
            uce-1610, sequence.
ACCESSION   KCKM01000084
VERSION     KCKM01000084.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 915)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 915)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..915
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1330apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>915
                     /note="ultra-conserved element locus uce-1610"
BASE COUNT          206 a          213 c          192 g          304 t
ORIGIN      
        1 gcgctgcgcc gcgccgcggt ttccgtgcgg cccttctctc cgtttcgttt caaaagggca
       61 aaagtctggg cagtgagcgt gtgcccggcg gcccgtgcca cgggcgatgc ttgcctcagc
      121 tgctccatca aaagccgctg tactaacgga tcctgactgc acttagcttt gtttccctga
      181 tatggtcata tcacatcagc cggggcacat gtgacattac atccgtaact ttaagcattt
      241 tgttgctatc ttcagttgga gcaatgttgc gattcccgag tatatttttt ggcagtccat
      301 agcacattta tgtcagataa tggcctatta ttgttctctg atatggccgg ttttccacga
      361 aagaatgagg ccttttttcc cgcatttgaa tttccagata ataggctttg acttctggct
      421 gcacgtttat gggtcttttc atgttatcaa cttagctcat agcgtggaac taaagaacac
      481 agactgcaag tgacaggcca gccagtcagc aaggcaggcc tgtcagtatc tctcatccac
      541 taatgatttc cctttagtct attttctgtc tcattggccg tttccttcaa aaacaaaatt
      601 gctcatttaa attcttatgc ctggggcatt ttggtcttca aatattgttg gaaagtgaaa
      661 ggattaggca aaatatgctt ttttaaaatg ttaatatatt ttctggttca ctttctcctc
      721 tgaggccaat taggaaattt ctgctggctg cattaatgtc aaactgacaa ccctcgctat
      781 aattacactg tgcttgaaac ctaactttca cttgtgggta gatgactgcg tctggcagtg
      841 acattgaatt cgctctgcca gcttttgatc atttaatcat tgctcgcttt cttttcctct
      901 ttgctagctg attat
//
LOCUS       KCKM01000085             943 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1346apa ultra-conserved element locus
            uce-4264, sequence.
ACCESSION   KCKM01000085
VERSION     KCKM01000085.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 943)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 943)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..943
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1346apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>943
                     /note="ultra-conserved element locus uce-4264"
BASE COUNT          301 a          200 c          131 g          311 t
ORIGIN      
        1 tgccacaaac tgatttagga ttcagatgag gatcgttcta ctcagcttag aggcaaaaca
       61 aaaaaataca tttttccaca ctgagatttt aatcctggat taattatttt agacattttc
      121 catattaatt aaagcagtat tgcttctttc ttgagttctt tatctactct ctttgagtaa
      181 agctatttaa tactggagat tgtggaaaac atttgttcat gattatccag acatacagtc
      241 aaacaagact gaaacaagag cagcatgcaa aaatgtattt aaggactatc atcccaaaat
      301 gctgctaaaa gctattaacc agtacgtgtt aattgccaca gcattcatat taattttcac
      361 ttcaggcccg acattgtgga atatttcccc tgatacattt taaacaaagt ttaatttaag
      421 gaactgcttc tatcaacact tatgaaaatt aacagccaag caattagcac tcatgaatta
      481 tcccttcccc cacgctttcc acagcatcat ttttaaaaca gttgctacca aagaaattgt
      541 tgttctttaa cccatcacaa aaatcagcca caagaaacct tacatagagg taccactccc
      601 tgcaatacaa tttttatcat ccatatagct aaaaacaacg ttgtcctatt tttatttaaa
      661 ttacctttag tagtcaaacc cacaaaaccc atatatggtc agaaaagcca gacttcctca
      721 gatcttcatt ttcaactgga agtcatgaaa atacaaatat attgagaaaa ttctggtttg
      781 cgtgtaggca aggttttggg ccttgaaact caagtttatt ctagagctga acgatccctt
      841 ccttacattt tggctgcagc tttctttgac tattctgcat ctcttcagta tctccttttt
      901 tggccatccc ataatgttcc tctgtttgct aacattcttc tgg
//
LOCUS       KCKM01000086             991 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1362apa ultra-conserved element locus
            uce-5927, sequence.
ACCESSION   KCKM01000086
VERSION     KCKM01000086.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 991)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 991)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..991
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1362apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>991
                     /note="ultra-conserved element locus uce-5927"
BASE COUNT          331 a          195 c          168 g          297 t
ORIGIN      
        1 tcagctcaaa atgaaacgtt attttttcag tatagccacc aaattgagga ttcaattatt
       61 tgcatacctc tggttgtaag acattctaat atttatcttc ccacttctgc tgctggagac
      121 acaagaatta tctgctgctc tggtagggaa acaaaattaa aaaaaccctg aacatgtagg
      181 tccattattt ccatttcaca ataattatgc agcatgttaa acaatgtata cttccatata
      241 atgcaaagcc gtatacctgg aaatacacaa ttaccataat acctcgctgg ttagacatac
      301 ggtgagacta tgattatgca gagtttgggg agaactttat gtataaaatt attctcgaga
      361 agaagaagga ccaccaaagt aaaaagctaa gccagcacat tatctaattc tcaatgtaaa
      421 ataatgcaga agtgcggaag atgaacatct gatttgtcac atctgatacg ctaatgtttt
      481 atccaaaagg aagaacacat tgtaacatgc tcattcatct gcataaacac cacctggccc
      541 tttacaggca cctactcaag taacaaaagt taatggcagc ccatttgtag ccatttcact
      601 ggtagagaca gaaagggttt tttttttttc tttcttttta aagtaacata tttacacgag
      661 tatctgttga ggaacagctt ccctctcagt gcttgcttct gaaacctcat actcagtcac
      721 tgtaaattaa ggcaatttta aagaaatgtt acaaaatagt atttaaagct cgtattgagc
      781 atgctcacac acacatatac acacacataa tgcacatcta aacacatata cacagttttc
      841 aatgcctggc catccagtgc tgtggataca catgagagaa ttataatgca gatctatatt
      901 tacccagaag tactgctctg gtcatgatct aaacagcagc tagatatggt ttctaatgta
      961 tggctgggga tcaagcagat ttgttgcttg t
//
LOCUS       KCKM01000087             225 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1391apa ultra-conserved element locus
            uce-1070, sequence.
ACCESSION   KCKM01000087
VERSION     KCKM01000087.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 225)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 225)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1391apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>225
                     /note="ultra-conserved element locus uce-1070"
BASE COUNT           79 a           39 c           51 g           56 t
ORIGIN      
        1 gactgggtac ttctcagctg caatctgcat aatgtttagt attcagtgag ttaaagcatg
       61 caatgaaagg gaactgtcag cgcaatctag aagatataaa gaaatgaagg ggtgaaaaaa
      121 agccgtatgc taataatcca ctcagtaatt aagtgaagat cgctgccaag cgccactgcc
      181 actttcaaag ggtaatttgt acaggaaatc atagagtcat tgtca
//
LOCUS       KCKM01000088             501 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1406apa ultra-conserved element locus
            uce-5357, sequence.
ACCESSION   KCKM01000088
VERSION     KCKM01000088.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 501)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 501)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1406apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>501
                     /note="ultra-conserved element locus uce-5357"
BASE COUNT          163 a          100 c          100 g          138 t
ORIGIN      
        1 agcttctgca aaaatcagcc aggaagatgc ttgcaccaaa cacagcatga gccttgcatt
       61 taatcggtta ctgtaataaa catataaaaa aagatttttt tttccatgag aggacagagc
      121 agtggctaca taaaaggaca tcaaatgaca catcctccat ctcccagcaa ataaaaaagc
      181 catcagctca taacaaggcg gtgataaaag gtgctgaggc cagtaagatt aagactttgt
      241 aataaggttc gggcgccaaa actgacagcc attttctttt atatttatca tgtcttcaca
      301 ttggggtgag aagccaggag tctgtcccat tgctggctag aatttatagc agctccatta
      361 ttaggagatt gcactgaaat ggggcagagg tatggttttc tgagaacact acaatagcct
      421 cctacattat acacttgaca ggtttgtcag cgcttagtaa caagccttgt aaagtacttt
      481 aatatcatta gcactatttt c
//
LOCUS       KCKM01000089             457 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1422apa ultra-conserved element locus
            uce-2469, sequence.
ACCESSION   KCKM01000089
VERSION     KCKM01000089.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 457)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 457)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..457
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1422apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>457
                     /note="ultra-conserved element locus uce-2469"
BASE COUNT          102 a           94 c          151 g          110 t
ORIGIN      
        1 ctgtcaggtc tttagaaata cagacatgtg ttaggaagcc actcctttca ctcgttaagg
       61 gttctcactc attaaaggca gccaaggaga gtccagaaga gatggaggga caggggagca
      121 gtgcctgtga gcccccgtgc tctgcaggct ggcagggtgg aagtgggcga gcagagggag
      181 gatttcaggt acttaccctg aatctgactc tgaggctgag ggttaaaagc agtggtgtgg
      241 ttcaaggagg ctcgtgggtt gggtgtgggg gctgggtggt gtgggctgac cctcatggcc
      301 gtacgacgca actgctccag ttcactcagg cgctctgaaa aggacaagct cccgggcttt
      361 gtctgctcat ctagtttctg acgatgtcct attgtgggag gggggggaaa aagatcagaa
      421 aatctcactg acacatgagg tctgttgatt tattttc
//
LOCUS       KCKM01000090             914 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1438apa ultra-conserved element locus
            uce-720, sequence.
ACCESSION   KCKM01000090
VERSION     KCKM01000090.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 914)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 914)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..914
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1438apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>914
                     /note="ultra-conserved element locus uce-720"
BASE COUNT          290 a          171 c          149 g          304 t
ORIGIN      
        1 ctgcaggatc gggataatta attattccag aagtgtttgt agtagacttt caaagtgcaa
       61 acatcatcat aacggtcaaa agtacactcc aattaattat tttatttcgg gagatgagtg
      121 tgtagtgagg tttcagaact gtcacgtaac tgcactagga caatctatcg cagttacaac
      181 agaagttctt ttgttcttgt tcatgctttc ttcactctac attaccacat ttttatcaaa
      241 aatagcaaaa ttaattttgc aaagggatga ttgtattgca aatcactgtt aacgttaaaa
      301 gactgggtaa agaattatta ataccattaa cgtaatatct aagttacacc tatacatcct
      361 tttccataga aaatggttct taattttcaa gttgttctgc tttattaaag ctcattacca
      421 tttctctttt aataagtgct ctttaaagtc attacctgca gtgaagttaa aggcagagct
      481 attaaaaggt tactttaatg tgaataatgg cctcccaata tactcaagtt aattactatt
      541 ggaaactggt tctattttaa tttaatgctg aacgcttaat gaaggatctg ccgggatagc
      601 aaaactgaca aaaattattc atggtcaaca gacctattct tgctgtctca tttaaagaga
      661 taatatccgt ttccagttct acataactgc atttaaaaat caaaattaca ttttaacatt
      721 ttccctggat atgtaaaaaa tgaaaaatgc cgttttggaa tgttcaatag catgttaggt
      781 agaacagcaa tccgcccttc agcttgctaa aaataacacc cacgtgatga acagcttttc
      841 tcactacagc tactttgtca gagtttgtct ctccgtggcc cttttctcac accgcacgtg
      901 cacggggctc gcag
//
LOCUS       KCKM01000091             942 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1453apa ultra-conserved element locus
            uce-1781, sequence.
ACCESSION   KCKM01000091
VERSION     KCKM01000091.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 942)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 942)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..942
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1453apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>942
                     /note="ultra-conserved element locus uce-1781"
BASE COUNT          269 a          188 c          204 g          281 t
ORIGIN      
        1 tacactaatg cagactgcac agactcaatt tcacaaagtg tattggaaag gcagcattca
       61 cgtaattaat gagaaaatgc tgcatgtgtt caggccttct gttaattgat taaatgagtc
      121 catgtctaaa tctgattata atcacactgt ggcagtacaa ttgagcgagt gtgtgagagg
      181 taaagagact gtttcactct catatatgtg gatgcatcct ccctcctgct ccccctcccc
      241 aaatagtaag aacaggataa aaactgggct aataggaaag gtaacaaact tccctatcga
      301 aagctgggta gcttaatcac aattacttgg acagttattc ttggtttagt gtctcagttg
      361 ctgtttaatc catcacttgc acttgtaaaa tgcaacatgc tttatagcaa gtgtcagttt
      421 gatgcttatt gtggttaaca agtgctggtt agttttcccg tggtgttgta ataaaacaca
      481 aaatctgcca tgtgcttgtc atttttttta aagaaggcca cagtgttccc taagggttgt
      541 gagagaagtt catcccattg aactggtcag caagatatca ttagctcgtt gtgtacatga
      601 aatccagggg ttagagcacc aagcgtcaca agccagtttc tttacctcct tgagctgatc
      661 agaggatcag agtatcaagg aaggattagc actgacttgg gatttgtgtg attggttaat
      721 ttattgcggc gatggcaggc ctttcatcta tggcaacatt taatcagcac ggccatggag
      781 gctattacgg gttagctctt ttctcaagtc agccagggct gcaccatcag ccctatcaca
      841 attcccctga aatttccaaa ttatctggaa caggctttag cctcacagta ataaaaatta
      901 gaagagattc ctgatagcac tggtggaaaa ggctttcact tg
//
LOCUS       KCKM01000092             897 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1469apa ultra-conserved element locus
            uce-450, sequence.
ACCESSION   KCKM01000092
VERSION     KCKM01000092.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 897)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 897)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..897
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1469apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>897
                     /note="ultra-conserved element locus uce-450"
BASE COUNT          255 a          222 c          189 g          231 t
ORIGIN      
        1 cctcgttgcc tcttcccgga gcatctccgt gcacgggcgg tgcggatgct cctcgtcaca
       61 cgggaaggac atcgtgcagc taggagtgat gctctgaaaa acaaagctgc ggcagcgtgt
      121 gtaaagacct gaagtcacgg accccaaagg ttccccgtga tccaaatttt tcatacctct
      181 gcccacagga gaggagttca tctccagctc actcacacaa acttagacac tccttactcg
      241 atttgaaacc aggtaagaaa atctggtagc accaaaccga gtgttggctc ttgctgcctt
      301 ttctcagtaa agatttaaag catcctgccc cttcccccca cagggttatt tcatccatac
      361 tttttttttt tttaaatgct tcctagtcaa acttgaatat gcaatgaagc tccagagctt
      421 tgtggcggaa atataattaa actggtgaaa gatgtaaaag atgaagaatg gggatgacat
      481 caggccgatt tcacacttgg cactcggatg gctgggccca agccgtgctc ttgccacgca
      541 acacagatca aagtgcactg ccactgctaa aaaggcaaaa ggggacttaa gtatgctaat
      601 ccccaggaca aatatatttt aatcttgtta gaatacaagt taatgctgca gctcagtggc
      661 tgaactttgt cagagtgtag agatccactt ttactttagc tctgaatgag gtagacctcc
      721 tggtttattc atacttcata aaagtaaatt tactaaataa gactccttgc agctcaccta
      781 gaggcttctt tagatgaacc aacaaaaaac ccgagtgact ccactgtctg aagtgactcg
      841 gtgttcccaa caaaagcacc caagccttcg gaagagctga gtacctcctc cttagaa
//
LOCUS       KCKM01000093             307 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1484apa ultra-conserved element locus
            uce-2995, sequence.
ACCESSION   KCKM01000093
VERSION     KCKM01000093.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 307)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 307)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1484apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>307
                     /note="ultra-conserved element locus uce-2995"
BASE COUNT          110 a           43 c           84 g           70 t
ORIGIN      
        1 agaaaaaaaa ataaaaccaa agaagtgtga tgggcgagca ggtcgactgt gtgagagaac
       61 acgtgcaaag tatacctcag aaacactata ggtggatgag cacgaaggga gccgagcctg
      121 gttgtgcagt ggggaaaaga aaacagagtt aaaaaagaaa tggtggcaca gtaagggtct
      181 cagaaggttt tctgtatagg tggttccaga actgagatag tagcaggggg ttcattaagt
      241 ttccaagacc agttatttca gaaactccaa atttatgctt tttaaggtgg aagcttctta
      301 aattaaa
//
LOCUS       KCKM01000094             579 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1499apa ultra-conserved element locus
            uce-1787, sequence.
ACCESSION   KCKM01000094
VERSION     KCKM01000094.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 579)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 579)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1499apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>579
                     /note="ultra-conserved element locus uce-1787"
BASE COUNT          180 a          112 c          111 g          176 t
ORIGIN      
        1 tatagttttc ttaatcccta aagcaaaaga ggctaatatt catttaaaac ccaataacaa
       61 ttaaaatccc caataacaat taaaacctac aatgaacaac tgctctagct ttgtttattg
      121 cacgcataaa taatcatact tcaatgaaca tgttagtatc tatgatctct tcctagatta
      181 aggttgcctc gagactgctt accttggcta ctgtaaatgt gacatgaatt acactcagga
      241 aaatgtgtct tacatgccgg gtttgaagta aattattttc ttctaatata cctacacatc
      301 tgtcacaagg aattacaggg cagattgagt gatgttaagt gtcaattgta atttggtgac
      361 agccatttta ttggctatgc atattgctct gcgaggacct gcttctcagt atggaggcca
      421 ccgtatcatt aaaaaccagt gatccttcac tgatgacata atttgactgg cagagagagg
      481 agcagtgagg ggcttgcttc cacctgcatg gaatctgctg tgtgtcagag atgaatttgc
      541 cttcaaatta gaaacagcac agcagactgg tggctgtaa
//
LOCUS       KCKM01000095             961 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1515apa ultra-conserved element locus
            uce-2294, sequence.
ACCESSION   KCKM01000095
VERSION     KCKM01000095.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 961)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 961)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..961
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1515apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>961
                     /note="ultra-conserved element locus uce-2294"
BASE COUNT          274 a          201 c          150 g          336 t
ORIGIN      
        1 agtataaaat ttgggaattt atctgctttt ccagtgggcc taatgaaaga taagatgacc
       61 tgccttgcta gtaccttaat atcattctgt ttacaaaaac accaatagta ctagctaatc
      121 atatatactg ttattgtacc tctcctgtga ggatgaaatg gccaaatatt tatacatata
      181 acattttctt tacatatttc tgttctgccc attttgaaaa ttaaaatata aacattctgg
      241 taaaaaaatc tgttctcctc atcatgccac acagtcaaag acaatcactt ttgccttatt
      301 tgatatggtg tgtatacgca tgtagaaaat acattaaagg tctttgtttt actgtatcgt
      361 gaaattaaaa agcatgcagt ctctgtaatt acattgtcct ttgccgtctc tttaaaaaag
      421 aaaaagactg tgttcaaatt ttccccctgt tttatttgca ccctattaac aactgttact
      481 agagctttaa ttatgcccct gtgattgcag agatgcgcct gacttgtgtc attttcctcc
      541 caggggatgc tttataatta ccagcatcca tcgtagctgc ctgtaagctg atgctttttt
      601 attaccagtt caataatcac tgcatccttg tgaacatctg ctctacaagc catgcatcgg
      661 aggtcccagt gcctgtcact cgatgctccc ttgctgtggc gacccttttg ccctcacctt
      721 cagtttatat ctaatttgct tagcagaagc ttcatccaga ttgcctcaca ggaacgcaat
      781 taatgctcca gatttgcaaa caaagaaatt gccccccctt tcttttttct tttttgtctt
      841 attatcttaa tgtcatatcc tataatttgt attcacagca gggtgaatca atataaatcc
      901 agagaaaaat atattatttg gttggctacc tagtttccta atgaaaagta ctaagtggtg
      961 a
//
LOCUS       KCKM01000096             262 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1531apa ultra-conserved element locus
            uce-3715, sequence.
ACCESSION   KCKM01000096
VERSION     KCKM01000096.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 262)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 262)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1531apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>262
                     /note="ultra-conserved element locus uce-3715"
BASE COUNT           73 a           57 c           46 g           86 t
ORIGIN      
        1 acctcgacgg cttcctgctc ttcaatcagt ctttatggcc cctcgtcgct tgttgttcaa
       61 gctgtgtgtc acagccagtc acaacagtta cttcaagcaa attttcacac tctttggctc
      121 aaactgctgg cagcattcct aaagactctg aggaaataat tccacaaagt ggcataaatt
      181 aatgtgacta attaacatga tgttaattat ttgtaaattg tatgtttgga tacacattac
      241 ttgagaggca tatgttacat tc
//
LOCUS       KCKM01000097            1023 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1545apa ultra-conserved element locus
            uce-2874, sequence.
ACCESSION   KCKM01000097
VERSION     KCKM01000097.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1023)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1023)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1023
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1545apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1023
                     /note="ultra-conserved element locus uce-2874"
BASE COUNT          320 a          196 c          177 g          330 t
ORIGIN      
        1 agcttatata agaaatcttg aaaaaatata ccacttttat caatacaaaa caaattaatc
       61 agaaaatatt taaaatttat gaggcatttc tatgtgaaaa cagtcatgct aaataagctg
      121 atctgggcag ttctaggaaa agctttagct gaaaacctgc atttacaatc tatcctaaaa
      181 acaaccagaa cacagcacca gtccaagcat tagctcaatt aaaaaaaggg ggaaaaaaat
      241 gaaatccctc ctcagcttaa taacttgtta gctcttgaca agtgcaacaa cacaacaata
      301 agccagtcaa aatgagtttt taaagcgagg ttatgccctt cgtgttgtgt tatcacagtg
      361 gcagatcaaa atgctgactt ggactctttc tgccagcagt gctgatgctg cctctatgaa
      421 gctgctgtca cagaatagtc atggtacctg ctcttgccta tagaaaagca ctaaattgaa
      481 ctcgaagtag tgtctttgtg atatcttttc aacaagtcat gtcccattca gcctgctagt
      541 ttatctctgt caggctgggg gcccaagtgg tttgcatgag ctgtcaggga caggtatacc
      601 aacctgctca gtgctaagga ggtaatgcat ctttcgggct tggtatttct tttccttttc
      661 tttcttttct aggtctttcc ttttctcttc attttctttc atttctgtgt atgcttggag
      721 ttcactcctg caataaaata agtctgctaa ttatactaca acagtaaaag atgtgctaat
      781 gttttatttt actttaaccc tttcatagct ccctctgcta ttatgtatta gcagtatact
      841 gacaccactg gaatgtaaaa ttacagttta ttcagttcta cagcagcagg attctacatt
      901 ggcataactg tgaagaaata ggattcaaat gataaaaact aagagcagat attagttcat
      961 attgtttact cttttgaaga atatgtcaaa ctaggtattt tcatagcttg ataaaacagc
     1021 att
//
LOCUS       KCKM01000098             652 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1561apa ultra-conserved element locus
            uce-1538, sequence.
ACCESSION   KCKM01000098
VERSION     KCKM01000098.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 652)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 652)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..652
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1561apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>652
                     /note="ultra-conserved element locus uce-1538"
BASE COUNT          177 a          127 c          108 g          240 t
ORIGIN      
        1 gtaatgcatg atcgtggctg ttattaattt ccctagtaac tctttactat tagaaacaaa
       61 aattgcattg caggagagta agtatctatc agcaggtatg ctttttttta agctggcttt
      121 taatgcagca gcctttcatc cctctgcata agatttacct ttaacccaga atctttcacc
      181 cattatctat aatgtataat tataaataca ttgtagtctt gagtaagtac aattaaaaag
      241 ggtaattcgt ttccctccct ctctcccatc ctcccaccca agtccttagg tttaattttc
      301 atgattatgt tagattatga gtcattttaa atcatggtat ccagtagaga ctactcctac
      361 tctgcagctc ttttcaacag ttgtttatgg tagtttcagc ctctttctgc ctctctgagg
      421 ctctttattt ttaaagcaag gcagacaagg cctaaaatta ttccattaaa gaggtgcaat
      481 ttttgtaatg ggacttagag tgctctgcag aagtgcaggc aagtttcttc aatatcctga
      541 gcattattcg ctcatttagt taaatgatgt ttctaattcc ctggtaatta catgtaatga
      601 ggcactcttt ctcttcttga tgagacttta gcttaatatg agatgtcgta tt
//
LOCUS       KCKM01000099             849 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1575apa ultra-conserved element locus
            uce-4332, sequence.
ACCESSION   KCKM01000099
VERSION     KCKM01000099.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 849)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 849)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..849
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1575apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>849
                     /note="ultra-conserved element locus uce-4332"
BASE COUNT          248 a          159 c          160 g          282 t
ORIGIN      
        1 ggatcctgcc atcccaggga tcctggcgat gccgtggtgt gttggctcca gcaaggaaca
       61 gcagccccac agcatcctgt cctttggccc ctagcagtaa gggtggatta atatgatatg
      121 gcacttttta attattagat caccaacatc aaataaaaga catatgaaat gttataggaa
      181 cagatgtagc tttaaacttt ggctttaaat taaaaaagat cccaaaagct agttgggtgc
      241 tgcttctctg tgcgcttgaa aatcagaaat ggctttacca tctcatactg cttctgtttg
      301 tccattcttc ctgtctctgt tttcatgttt tcatttttct atggctatgt ggaacacatt
      361 tctcagttaa gtacttgctt ttgagagttg ttgccataac aaccgtttca ttccacgata
      421 tgcacactat ctctgaaata cagaatttct ccttaaagga gcatgtgcca cacacatcaa
      481 agaggaatat ggactcatta tttttacatt attttgtggg caaatagatg ttttccaata
      541 cagttttttt ctaactggat tttcttgttc agtggaactg tggttttttt aagcattcct
      601 atcttactgt ataatttttg cctgaaaccc agaacattag gagacaagaa tctttattgt
      661 agtttctttt ctccaaaggt ctgagagaac tatgctgctg ttaatgcatt taaaacccac
      721 cttattagac agaaaaaata tgtaaataaa atctattaaa aatgcatagt tcttgaagaa
      781 aaacctctat tttgctgtac agattggtgg tagaaagagg gagagggcaa agaatagtca
      841 ggacgcttc
//
LOCUS       KCKM01000100             713 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1604apa ultra-conserved element locus
            uce-4629, sequence.
ACCESSION   KCKM01000100
VERSION     KCKM01000100.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 713)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 713)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..713
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1604apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>713
                     /note="ultra-conserved element locus uce-4629"
BASE COUNT          228 a          119 c          154 g          212 t
ORIGIN      
        1 agcatccata gaaataaaac catcaacttc tttgaaacaa acaacccttt gctttccctt
       61 cactgcttac ccctttaaaa gatgaataat ttctaaggtt tgtgtactct atatcttttt
      121 ctttaaattt attcctttgt gactggctct acatagcctg tctgtccgaa aggcaattgt
      181 agtatcatct catttctctt tcttcaaggt taagaatatt ggtaggtatc aatttagggc
      241 atatttattc aaaggttaga aagtacacca aactgttgtc tagtgtagac ttttatttta
      301 ggagtgaaca taaacacaaa gaaattataa tcctggtgta atataggaat ctaattaaga
      361 ctaatgaggc aacattaaat ttaatgtatg atgcatttta tatgccttac cattagagct
      421 gcagcaagct gttcatcaga gcatcgaact ttggtgaatc agcccctcaa ggcattgtta
      481 aacaatctgg ttttaggcct cctcctgccc attagattgt gttgggcttg caaagatatg
      541 gatataaata gaaatttggc agggaacagc acaggagagg aaaggggagg acacaagaag
      601 ttctgaccat ctttgaatgg tgagtggatg aaaagggaag atgaatggat ggaagtgcat
      661 gacaccctca aggaggttga gacagaggga ggagggcaaa ggggaacagg tga
//
LOCUS       KCKM01000101             850 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1620apa ultra-conserved element locus
            uce-231, sequence.
ACCESSION   KCKM01000101
VERSION     KCKM01000101.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 850)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 850)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..850
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1620apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>850
                     /note="ultra-conserved element locus uce-231"
BASE COUNT          317 a          129 c          148 g          256 t
ORIGIN      
        1 gacggatcag gttgtctgtt attggcaaca aaaactggaa aaagaggagt gggttttgat
       61 ttcagttatg tgcacagaaa tctcagtaat tctatttaat ttagagaagt cactccagat
      121 ttacaccaga gctactgaaa atcaaaatct ggccccattg tcttagcaaa atacaccaag
      181 tcaatatcag ttcattacag agagggagaa agaaagggaa tgagagagaa aacaaggatt
      241 tcgttagcaa tgcattctgt agtataaaag ataaaaagga atatccaatt aacacaccac
      301 tataattgct tgcagacatt cttttttatt taaagatgaa atagctaaga gttctcatca
      361 aaactagggt cacagcctac atattaaatg aaagaaattg attgggcttt attacaccct
      421 gactactgca aatgtgcctc aatcactgat tgctataaat ttattcttat aaactactaa
      481 ttgcccaagt cataatggta acaatggtat aatgaaatta tcttgatcaa gctgatgcac
      541 aaattttgct tgacaacatg agcagtgtga gaaaaaagga aagaagacat gcatacaaat
      601 acataatgtt tcattaaaat taaaaccaat gttaaaacaa ctgttctctg aagtatacaa
      661 agttctgtat tagaagggct tcctttagaa aaatcattta agaagacagg catttacatt
      721 tataataaaa tgatcttgca ttttttattt gtcttgaaaa ttaatgactt acttaatcac
      781 atttgatcaa aggagataag ttgatgtagt catgtgtttc tgattgcatt aagcctgatc
      841 cagagtggca
//
LOCUS       KCKM01000102             709 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1636apa ultra-conserved element locus
            uce-47, sequence.
ACCESSION   KCKM01000102
VERSION     KCKM01000102.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 709)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 709)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1636apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>709
                     /note="ultra-conserved element locus uce-47"
BASE COUNT          199 a          181 c          140 g          189 t
ORIGIN      
        1 aaatgacaga atacgagaag ataatgctga ggatgctgtc aacgcgcctt actgactcct
       61 gtcaaaatat tttacctagt agctttataa cccatcattt tcgagctcca gctcagcatt
      121 ttgacaccat tttgacaggc accttacaat acctaaaaga tagcttgatc aatgtgaaaa
      181 atgttcggta ggagaagtag ccaaaacggt acttttgtga gcggcgacta gtgcgggatg
      241 aacagccggg tggttcatta ccggcccacg tgcagggtat cgcttttgtg taacaacttg
      301 taagccattg acaacttcta ccgtgcactc taaaccccac atataatatc ataagctgtt
      361 gtttgtctta ctctccactg tgtcttctgc cttcgccccc ccaaaaaagg caagatttga
      421 ttatctccgc tgcatcagcc aagacagcaa caccagctgt tctcattgtg cagcctcttc
      481 ctcacggcct acatgttaat aacctgatca ttccattttc tccttcaact gccggctgca
      541 gcacagcgaa gagacaaaaa cccaggccca tctgcagcag ctgtaggcac tgaactgtga
      601 agccaccagg gatttataaa ctaatctgta acacaacact gccttgtttt tacaagtgag
      661 aggccacatt tgtgcagacc tgatcttttc ttgcaataaa ctaggaagg
//
LOCUS       KCKM01000103             845 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1651apa ultra-conserved element locus
            uce-2870, sequence.
ACCESSION   KCKM01000103
VERSION     KCKM01000103.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 845)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 845)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..845
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1651apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>845
                     /note="ultra-conserved element locus uce-2870"
BASE COUNT          238 a          165 c          176 g          266 t
ORIGIN      
        1 gagcacgagg cagcatttta caattcaagt tacacttttc aagcctgaca gagaaacccc
       61 ttcgcccagc agagctcaaa gcctgtgtta gtatctgcca tttgcagagc ctctcgactt
      121 cagagggggc tagttttcat ctggtgggaa cgtcactgca tgattgaggc attattgctt
      181 tgaaaaggac cttaatcgtg tgatcagtct ataaattaga ttgtactcaa tgtgagctgc
      241 ggtggtgaga ctagtcccct tgacttcagg gggaccactc acttcactga ggttttatat
      301 ggtccagact ttagatttaa gaataaatac tttattttct gccaaatata cagtaagagt
      361 taatcttacc aaattattct gattctgatg agcgctgcaa acaccaaaaa tatatgttca
      421 tttattgtgc aggatttttg tttacaacag gcattaaaga gaggaaatgt cagtgtaaga
      481 agaggtggac ttaatgggtt aaaaactgtg taaatgttac tctagttaaa ttacagcttg
      541 ttgttcagat gaatactctc cacttctcat atagctttaa attatggaca aatgcttgca
      601 attgtgaact acctacattg tggctgcctg ttcccaggct tcatcaaccc tagctgtcca
      661 atgggattac tgtaagcttt cacggcagtc tgccagccac tgatcagaaa ttcatatccc
      721 tggatgttag attgctctct ttattccatc cttgtgatgg ctgtgattgc tgtcatggtg
      781 ttaggttaga aattagcatt ttgtggccca aattttgcca tccagaacat aatcagaaaa
      841 aagag
//
LOCUS       KCKM01000104             309 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1666apa ultra-conserved element locus
            uce-6938, sequence.
ACCESSION   KCKM01000104
VERSION     KCKM01000104.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 309)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 309)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1666apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>309
                     /note="ultra-conserved element locus uce-6938"
BASE COUNT           93 a           52 c           53 g          111 t
ORIGIN      
        1 catgcaagct gagctgtgaa actgtgatgg aaatattaga gctgttgtgc ctgaaaaaac
       61 gcagtgatca tttcattctt cctgtctttt aatgctccag ggttttggag acgaatagga
      121 gcaataagtt cactttgcag aattaatgct gtaattcttt atcataagag cagagcatta
      181 cctcaatctg atttttctac aaaatggttc aaagtctatt tttaatgatg gccctaattt
      241 gttaacacct tttaaattat taatcccctt tatattcaag tagttattgc atgtcataac
      301 aatgtatct
//
LOCUS       KCKM01000105             865 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1681apa ultra-conserved element locus
            uce-4553, sequence.
ACCESSION   KCKM01000105
VERSION     KCKM01000105.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 865)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 865)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..865
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1681apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>865
                     /note="ultra-conserved element locus uce-4553"
BASE COUNT          240 a          175 c          151 g          299 t
ORIGIN      
        1 gttttatgct gattataata tttatttgtg aaactaacaa ctgtattggg actatcttct
       61 tccaactcct tctcccctct tccaacctct ctcaaaccat actaacacac aggtcctaaa
      121 ttaagccatg ttcagactcc tctggtttgc tggttttcag cctgtcagta gtttgtaggg
      181 taaggcactg caaacagagc tgttttagaa atataaggct tgatagaagc atatagtttc
      241 aaaaccactc aacaaaatat tcatcagaag gaatggtatg ctattgctcc ccacatgtag
      301 tcaatatatc actttaacta cagtgcattt accctctgtt tattatccct tctgaagcca
      361 tgtggaatac tcatcttctc taatccttgt ctatagtatt tccaaagtac tttacaagct
      421 tggagtaatg gactttaatg ccttgcagca gctgagctgg tagcatatat gataccttaa
      481 atgtaacaat caaaggagca tgcaagattt tggtatttcc gctggcttgc agatgtgcag
      541 tatccaggtc caaaaactgt aatgtcaagt ttagactaaa tgtgtttaaa gcaacataat
      601 gtctcactgc tttgtgtcaa ctctcctata atatgtgtgg gtattctctg ataaagagag
      661 caccagtatt aagtatcagt tatctgaacc ttacagtaat ttcttctttg tatgtgtgtc
      721 catgaataac cttgctcaag atttatgtaa cggagtgtat gttttattaa tccagagcat
      781 gtggtattct ccaggtgcta agctttgatc tccttgccct tctatgtata aagttttctg
      841 gttctcattg acactgatgc tcttg
//
LOCUS       KCKM01000106             763 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1696apa ultra-conserved element locus
            uce-2879, sequence.
ACCESSION   KCKM01000106
VERSION     KCKM01000106.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 763)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 763)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..763
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1696apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>763
                     /note="ultra-conserved element locus uce-2879"
BASE COUNT          234 a          143 c          131 g          255 t
ORIGIN      
        1 aatccagaac atactagcca caacatttgc aggtgactct gatacatgca gtatctcctc
       61 ctgtggatgc ttctgatttt agtcacctaa aactgggagg actcaaaaat aaacaaaacc
      121 aaatatacta aagatacacc ttctatttca aagctttact tatgcagtag tacttgacta
      181 gactcattta cctttgtata gttatagtct tgatatagaa tagtatcagt tatacataag
      241 agttggcatc tctttgcaaa attgacctct tgtttacaat tttatactaa tcaccttact
      301 gatctttcag tattgaattt atttgctttt gcagtgccct actctctact gtctgaatat
      361 taaatgtgtt tgttttccca gagggctaga gaacattgga caaaagggtt cagcaggaga
      421 gagtgaaata aaaagaggtt gtgagtcttt aaccttgagc ctgaaatgaa tgtgaaccaa
      481 acacaagata cttggcttac ctgaagccag gtaaacattc gagtataagc ccacacacta
      541 ccaaccataa tacagctgtt gatgcttaac aggccttgcg tattttgcct agattgttgt
      601 atttagcagt gagattctga acttcatctt tttttcttct gatgggaaaa atctctagca
      661 tctaaaattc tctctctttt atttttcttg cctgatgcag tataataaat ctaactttca
      721 aggtgggatg aaactgaaga gttttttctg ttacagctac aga
//
LOCUS       KCKM01000107             945 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1712apa ultra-conserved element locus
            uce-2933, sequence.
ACCESSION   KCKM01000107
VERSION     KCKM01000107.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 945)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 945)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..945
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1712apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>945
                     /note="ultra-conserved element locus uce-2933"
BASE COUNT          288 a          232 c          153 g          272 t
ORIGIN      
        1 aacccctcgt taagccattt cttgcttccc aattactgct gtaccccaat aaagactttt
       61 ttaaagtggt gatttaacaa cagtagtttc cacagatatt taacaggggg agcccactct
      121 tctgggctcc tcttaacaaa atcctgtgat gaattcatgt tttagcacaa gccacagtgc
      181 acacagaaaa aaattcagcc attcagagat acaaaaagca gtaatcttag cctgaaacaa
      241 ttggactgaa ctgaagcaat gctcctcttt tctagatcta cttttaagat ccctgtcaaa
      301 acagcccttc aaacacattt gattgggttg gggctcatca cgctgtcacc aactcacttt
      361 tcattaggct gttgctctct gttagcctag ccaagcagaa gaactcaaac acatgcacaa
      421 attaaatcga catccaaact ccaccaatat acaaagcaat ttaaatgata ttcattagag
      481 cgatgacaag tcctgatgag gctttcagga gcggagtcct tcagcttctg ccgactcggt
      541 ttcatggtca ttgaggcgta actgcagtga ctgtacctcc agtttagaaa aaaaaaagct
      601 gagaatatga ctccgcttcc tgacacacct acctcattct ccctctctgc acaggttcac
      661 atctgagcac aggcttcagg cttttcttac agttcctcac agcctttgta ttacatacac
      721 gctttagcaa gcccccttcc tttccccacc acctacaaat gcgccaatta aaaagaattc
      781 cattttcaag taatttcatt tcacttggct agaaaggtca ctaactcaca attatgatgg
      841 ctataaacat gtccccagtt tcctaccatg caagaatgaa tgtgatatgc tgaagcttaa
      901 taaagaagta tttttcattg ttaatttata ctgaagttta aaagt
//
LOCUS       KCKM01000108             645 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1728apa ultra-conserved element locus
            uce-5083, sequence.
ACCESSION   KCKM01000108
VERSION     KCKM01000108.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 645)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 645)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..645
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1728apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>645
                     /note="ultra-conserved element locus uce-5083"
BASE COUNT          251 a          121 c          116 g          157 t
ORIGIN      
        1 gaaaatactc catcgccagt aacatttttt cctgtgtttg ttgattccac gcttggattt
       61 aatatcgagg attatatttt ataaccagaa acaaacaaac agatttataa ctgaagactg
      121 aaaggcaaac agcaaaaaaa acaagccaag tacggaacct aaatgtagca tttttattga
      181 cttcttagaa accaaataac ctggcatatt agtgtgtgca ttctgcaaca gacattcagc
      241 cccattgtac tacttagaag agaataaaaa gaaaccctac tgtttgaaat ccagcggaac
      301 atccccacaa cagagcacaa ctgttccctc atgcatgaat gggaaggaga tgaaagaaaa
      361 gatggacttc tgaggtacag caaaaaacaa agacaacaaa agtgctgatc atgagggaat
      421 gacacaactc attgctgcaa aaaggatgag agaaaggagc tcaaacaatg gtgcagacag
      481 ctaagtgaca tgtagaagaa ttgaaaaatc tacagaagtg tcttttcttt ccacacttga
      541 cgagaaacaa ttaaatgttg gtacatctgt cataaaaaag ataattgaaa cctgttacca
      601 tcattataga cggtaactta acttccaaaa ctgtaactgt ccaat
//
LOCUS       KCKM01000109             466 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1742apa ultra-conserved element locus
            uce-786, sequence.
ACCESSION   KCKM01000109
VERSION     KCKM01000109.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 466)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 466)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1742apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>466
                     /note="ultra-conserved element locus uce-786"
BASE COUNT          151 a           83 c           65 g          167 t
ORIGIN      
        1 tttccctccc tcgtacattg ccctgtatat agtctcgagt aactgaaagc cataattatt
       61 tactttgggg agtcctataa gccatgtcat cacaagtacc gatgaatttt ctgggaatga
      121 tgtgaaatgt ttctggttaa actctagact taacatctca agaagaaaaa ataatgtttc
      181 taccacatat tttattaagc cctttaggtc cttttacaag agaggaaata ccaattaacg
      241 tataatttag cagaacaaaa tattatccca tttcaactag tacccacttc cttgaagttt
      301 attcaagcat taataaccat ttaatgcaat ttaactacac tgaggtatcc gttacattaa
      361 tatcatatat ccatcaggaa attagagttt tgtctctatg aattttgtat tacaagaaag
      421 tctttataat tttattctgc actttatggt ggctaattta agtttt
//
LOCUS       KCKM01000110             867 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1758apa ultra-conserved element locus
            uce-6530, sequence.
ACCESSION   KCKM01000110
VERSION     KCKM01000110.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 867)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 867)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..867
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1758apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>867
                     /note="ultra-conserved element locus uce-6530"
BASE COUNT          286 a          186 c          158 g          237 t
ORIGIN      
        1 tttaaatgta aattccctct gtatcagaat aaaagaatat ctgtttaata tgaaatgaag
       61 gcagtttggc aggatatgcg ctacttcagg taagccagaa taaacagcaa cattgattaa
      121 aaggaggccc ctattctgca cctgtcgtgt tcacctcctt tgccacaaag gcctcgctgg
      181 tttatttacc tgtagagctg ttataatatt ttgctttcca aagagatttg gaagccactt
      241 gccatacctt tggcatttct ttaatgacaa agcacttcag gctcaagtgc agaagcccat
      301 tgttctgctc cacagcatgg aaaagaagat gaatccagaa gcacaggatc caaacagaaa
      361 ttattattga tttaatcaca taatcagcag caaacacttc aggctaagat agcaaatcca
      421 taacagcctg cccacataac cacccttaca aatttaccag caaaccactg cgcacactta
      481 gcaaacaaga agagcaaggg tcaccttcac ttggcggcaa aatattgaca ttcctaaagc
      541 ttaaatatgt tttgagttaa gtgttatcaa tcagtgataa gagttgaatg tctgttaaac
      601 ataactacat tggcagaagg attatagaat gctttcttgc cataatctag aagcatcttt
      661 cagacaaaac tctgcttgaa atcaattgtg cacaaggagc tgcctgctga gccccattca
      721 gtgtcataca aaaggagaga gagtctccct gtgatcttta accataaccg gttatctaat
      781 gagaccaggg ctttaatttc ttttcacatc aaacatagaa tcaatgctct ggattcaaca
      841 atgtgtgtaa acaggccgtg aagccat
//
LOCUS       KCKM01000111             949 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1774apa ultra-conserved element locus
            uce-665, sequence.
ACCESSION   KCKM01000111
VERSION     KCKM01000111.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 949)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 949)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..949
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1774apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>949
                     /note="ultra-conserved element locus uce-665"
BASE COUNT          273 a          203 c          185 g          288 t
ORIGIN      
        1 ctaagaattt gccatattca atctttaggc tctgaaccca aatgcccttt gaaagtgaat
       61 ttatgatcac ttcatcacac tgtctattag ctcactttct aacaaatagg atggagaaat
      121 atatggcagg aactgcaacg gcacatttcc aactaatggt taaaatgtca gggcgataat
      181 gtacaagtgc gtctgccctc aaacaccaaa tcaaatgcag ctttacaagg gctgtcgcca
      241 ttccacttta gttaaagact tgcaagcttc cttcttcccc tttgcagggc tgcagtttgg
      301 aagccgctgc gtctcatcag ggctcggttt gccagtgctg tactgtactt cattaggcag
      361 ctctatttaa tggtttcaac aaaagccatc attttagccc aactgccttg actaaattaa
      421 aatttccaat ctctgtttta gtgttctgca actgatgtat acataagcaa aactggtcaa
      481 catctgccag ggggttggcc aaaagttctg taaagatgta cttcacattt ctgaagcatg
      541 tgcaaagtaa caacgtactt atcctcctga gggctctcat gattttactt caccatttgt
      601 tcagacacac tttagcagca tataagccat acagttgatt ctccccttgg ttgcagtttt
      661 atctgtagtg tcattttgag taattggggt atggtagctg atcaactttc aggtttctca
      721 ttggcagaaa gggactgtat tggcaccaag aaagaatatg atgggtcctc tcggtgcctg
      781 agcaagtgtc cctcttttgc acttggctac ccaaggccat tagaaaataa gcttaataaa
      841 gcaactcagt gtatacatct taactattcc cagccaaggg gatgcagcta tagaagaaat
      901 attttaaacc aatatgaaag atggtaaatg tacatattta gtcagtgat
//
LOCUS       KCKM01000112            1024 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1790apa ultra-conserved element locus
            uce-54, sequence.
ACCESSION   KCKM01000112
VERSION     KCKM01000112.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1024)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1024)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1024
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1790apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1024
                     /note="ultra-conserved element locus uce-54"
BASE COUNT          276 a          228 c          181 g          339 t
ORIGIN      
        1 gacctgataa tttttgttgc cacattactt gcacgtacat tgtgaaaatg ttttctgcat
       61 ctctaggtgt atttcatcag ccatgctccc agctgtcaaa gtagagtgaa tgctttaatt
      121 gcctaaccag ctttccatgt ctcccataca ggcacgaaaa ctccacgcac agttgtatag
      181 ttacatggtg gtgcacagtg attattagag gtagttttcc caacttctgt gttctagtaa
      241 gcaacaagca cgttggattt agtgagatta aaaacacagt tatttactag cagaagctta
      301 tgtttttctc ccctctattt ttacatttga gggtaaagta caatttatgt tctgggcatc
      361 atcttgtgga agttctaaat cacttcatga ggctttcagc ctggcttatg tcatttatcc
      421 atcagcactc agtccattta atccaggcct ctcagctgta cagacccagc tcctgttgtg
      481 agtgatcggc ctgcttgagt gctcccagct tctcctgtca catcacattt gcataaaaga
      541 ggacggataa ccaaatttga gcacacaaat gaaaatgcta agcgctgaac ctgtcacagt
      601 tgttgttcaa ctaattgtga aaaatttgat ttgccggctt ttcactgttt atcatgtgga
      661 cccccttctc aaatttgcct tggcttctgc ttctgtacat gtagctttta aactctctac
      721 acaagcagcc caccctgggg attacttacc tctcctacca gcttttaatg ttggctcatc
      781 tacttgacta aattaggcca ccatggcaaa caaacacata attaaaaacc taggaaagac
      841 aactgcagtt gcacttctta aattgatttt gcagtctatt actggtatat gtctttgcat
      901 tttgccattt tgtcgtgtcc ttctgtaaat cctgaaaatg tctttgcttt tgataatata
      961 taggaggaac atctgttatt tcaaaatgca gccttttctt ctcaaaagga catagcaaac
     1021 aaaa
//
LOCUS       KCKM01000113             456 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1805apa ultra-conserved element locus
            uce-6512, sequence.
ACCESSION   KCKM01000113
VERSION     KCKM01000113.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 456)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 456)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1805apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>456
                     /note="ultra-conserved element locus uce-6512"
BASE COUNT          169 a           88 c           99 g          100 t
ORIGIN      
        1 aaaaaaaaga caaacacaga aatgaggaat ctgacacaga gatcacttgt gctgtttcac
       61 atgcaaatga ttacagaggt ctctgcctaa ccaacaaccc agggagcgtg gacatgcaga
      121 gcatgcaggc aggatgtgtg gcccaaggcg tgcacttctc ctctgcaggg gaaccatgga
      181 gatgacagca cagaagagaa aaggcactta cagttgttct agagaggcaa gtcctttaaa
      241 tgcttgcctg tcaattgact ggatttcatt cttgtacaaa tagctgaaac aagaaacaat
      301 cagtaatatt agtacacgaa caagagctac atgaaggtgg agaagaatta agttgagaca
      361 tgaagactac atattaggac aaaacaaaaa ctaaacacat acacataaaa tactctttgt
      421 ccttgagatt tcattccaaa tgtttgccag gaaaga
//
LOCUS       KCKM01000114             772 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1821apa ultra-conserved element locus
            uce-2845, sequence.
ACCESSION   KCKM01000114
VERSION     KCKM01000114.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 772)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 772)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..772
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1821apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>772
                     /note="ultra-conserved element locus uce-2845"
BASE COUNT          255 a          139 c          154 g          224 t
ORIGIN      
        1 caggcaggaa tcgtaatagt agacaacctc ctggaaatct ttgtatatgg tgtagaaaac
       61 tgctggtttt tacatttaaa attaccacag gagttaacac ttagaaaagg gaaaggaata
      121 atgctgtcat gaatatctaa ctaatgacaa ctgccagaaa agctcttcct ttgccagtaa
      181 caaatggacg tctatggcgg ttatttctca ctttaaatac ctaatctgat attatatttc
      241 agctcaaaga actaaaggag aaaagatgct gtaatctaat cataccacaa tccaggtgac
      301 atctgtacta ggcagaatac tgttgttatt ctgctgtcta gttgctgttg ctgagaatga
      361 tgaagcagcg aaattacatt ttcccattat tatttccaga cactctctgg caatggtttg
      421 ttgactctaa taaagcttca gacaaagctg tcagcagagg aaatggcaga aggggagcaa
      481 ggaacagcct ccacaaaaac aaatctaaag tctcggtgat agattgtgca ttttctgata
      541 aaatttaatg tgtaggtttc agaatctatc gtaaagctgc agctgagttc tagagacata
      601 catgtgttct ctcaactcac ggtgattaag actttgacaa acataaacat attatgaagg
      661 attaaagagt cagaagcctt acctgctata gtgttgagga acatcaagta ttcaaagtta
      721 gatatctccc gtctctgcca gcgctgagtc atgttcgagg atttataaag ct
//
LOCUS       KCKM01000115             625 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1836apa ultra-conserved element locus
            uce-4698, sequence.
ACCESSION   KCKM01000115
VERSION     KCKM01000115.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 625)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 625)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..625
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1836apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>625
                     /note="ultra-conserved element locus uce-4698"
BASE COUNT          113 a          209 c          171 g          132 t
ORIGIN      
        1 gcgctcgcac tgccggcgac ggccgggtat gggcccgacg ctccagcgcc atccattttc
       61 agggctagtt gattcggcag gtgagttgtt acacactcct tagcgggttc cgacttccat
      121 ggccaccgtc ctgctgtcta gatcaaccaa caccttttct gggctctgat gagcgtcggc
      181 atcgggcgcc ttaacccggc gttcggttca tcccgcagcg ccagttctgc ttaccaaaag
      241 tggcccactg agcactcgca ttccacggcg cggctccacg ccagcgagcc ggccccctta
      301 cccattgaaa gtttgagaat aggttgagat cgtttcggcc ccaagacctc taatcattcg
      361 ctttaccggg taaaactgcg cgcacgccga gtgccagcta tcctgaggga aacttcggag
      421 ggaaccagct actagatggt tcgattagtc tttcgcccct agacccgggt cggacgaccg
      481 atttgcacgt caggaccgct acggacctcc accagagttt cctctggctt cgccctgccc
      541 aggcatagtt caccatcttt cgggtcctag cacggacgct cacgctccac ctccccggcc
      601 gggtaggacg ggcgagacgg gccgg
//
LOCUS       KCKM01000116             518 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1852apa ultra-conserved element locus
            uce-6505, sequence.
ACCESSION   KCKM01000116
VERSION     KCKM01000116.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 518)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 518)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1852apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>518
                     /note="ultra-conserved element locus uce-6505"
BASE COUNT          163 a          108 c          113 g          134 t
ORIGIN      
        1 aactccaaaa caaaggacgt gcgagcgctt tcatttattt tgataatcct cctcctgctc
       61 cagagcgttt tgctgtcttt gtcaaagtga atgacaacaa tttggccaac tctctctgag
      121 ctgcactcaa cagtgacagg caaattatca gaggccctgc actccttatt atcagaggag
      181 aagtcatcag gaggacgtgc ggaggatccc tctcccctgt cactatttgt cagtgggaca
      241 agggccactg ctatgggtag ctgacaggta atttcaacaa taacaattac tcctattact
      301 ggtgtcataa acaattcgcc caaggcatga caataacaaa gctttataat tcaatgccat
      361 ataaataaat gccagcaggt aacaagtaat ttagctccaa tcaggccttg gccccggcat
      421 taatattgtt attgcaagaa aatggaaaat tgaaaaaatt caatatgtta atgaattaag
      481 aggggttcaa aggctaaggg aggggaggag tgatggcg
//
LOCUS       KCKM01000117            1096 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1868apa ultra-conserved element locus
            uce-5478, sequence.
ACCESSION   KCKM01000117
VERSION     KCKM01000117.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1096)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1096)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1096
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1868apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1096
                     /note="ultra-conserved element locus uce-5478"
BASE COUNT          265 a          238 c          193 g          400 t
ORIGIN      
        1 gttgtgcttt ggtacctaat cctatttttg aagaagtcag tgctgcaaag ttgtcagtga
       61 tgtcagtgat gcaggttcag acttttccag aagcactttg cttaacaaat ctgcatttcc
      121 accaagggct cctcatgtat tcagaaaaat cacatttcaa agaactgttg ttgcaaacag
      181 ctttgcaagt atttgaccta gtgatatcaa atcattttag ctaatattac tttatgtcag
      241 cagataaatg ccattacaca agtacacgta ggactgcagc tgagtccgtc cgagtgctgc
      301 ttcctttttg cttaggagac ctttgagaac tcacctcaga gcacttagag acagcttttg
      361 ctccaagtcc tgtcttttgg cctggtgctc cgagtctctt gcatatgcag ctgctgtact
      421 tgatttcttc tcctgctaac gattttcttt attgtgaccc atgtcctgtg tcattttttc
      481 tagttcatca tcacgggagt aaaatgttac gttcggaatc aaactcttca attaccactc
      541 agcctactat aggttggcaa acccctctct ttgtctcctt ctcctcctct tctcctctct
      601 cttcatttcc ctcccacttt tttaatatgt atccttttaa caatatgctt cacccatcac
      661 atttagctta atgtgttcct tcatgggctg gtgctttgca agctaatttt ttttgacacg
      721 cttgaagagt gtttcaaaaa taattgtcat tgacaccgac acagttaaat gctaacgtct
      781 tgcatctgtt cttgccgagc attctctcat atgtgtgttt gtatgtgtgt gtgagtgctt
      841 cgccattgat tacctcatca tagtttggat tttatgttca tcattgcatg ttgccaaacg
      901 acgtaacttc atagtttcga ataaatatat ttgctgcttc ctgtaatttg tacttagcaa
      961 tttcttctgg aacatccaag caagtattat ttattatgag tagctgtaga gttagcaaaa
     1021 ctgctcatca ggttgtgtct atgtattaat agttgattga ttaacagtga tttagcacgt
     1081 tgagcattcc attatc
//
LOCUS       KCKM01000118            1010 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1884apa ultra-conserved element locus
            uce-6802, sequence.
ACCESSION   KCKM01000118
VERSION     KCKM01000118.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1010)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1010)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1010
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1884apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1010
                     /note="ultra-conserved element locus uce-6802"
BASE COUNT          273 a          219 c          276 g          242 t
ORIGIN      
        1 gtcagtggcg atgtggttac taggcaaatt ttccccatta aaaccttacc aaaggcagat
       61 gtttaggggc ctacaggatt tacagatttg ctctccaaag agcatattag ggaggatggc
      121 tgctctcctg ttgggtcgtg cgctgtgttt ttgaaagcct cagtgcccac cccagattaa
      181 agcagcatgt tgctggaata ctgggcctcc agtgaagatg cctttcaaca acgcaaaacc
      241 actaatgaga aaacatagac agaaggagag ccagcccccg atggccgtgt ttctcagctt
      301 cgagtagctt ccagaggcat ccgtcgcact ggcccgatgg aagaacaggt cggaggaaga
      361 tgaagccttt gctctcggtg gctctgacgt ttggctgtag ccgggacgca aacagaaaga
      421 aggaaagaga acaagggata aagggaggga gagatcctgc ttggccacat accgtacatg
      481 cagatagtgt attgcatttt tccagactag ggagacctcc tcttccaagc gttccagtaa
      541 ttaacctcac tttcttggct ggtgttaatt tgttccaagt atttgggctt tagatctaac
      601 catgggaatc ttattccctg cagaagtctt gccagctatt actagacatt ttaccacaca
      661 catgcaggcc aaaaaaagca aggctaatta caccgctttt tttcatgcaa agagaagtgc
      721 actcgtgaga ggagggggag aaggcaaggc agcatctttt ttgggtctgc ccgtgggagg
      781 aggggacagg gggagcaggg ggctgcccct tgctgtgtga tacctgcaag gtaaagcctc
      841 agtgaggctc taggagccta ggtgtgacag tcggccacgt gaaactggag aggagtggtg
      901 ctaccaggag tgtgaagaac tgagttcaat tattcggtac caatgggagt tctctaagta
      961 aaaatttaaa caggacgaat tattcgaacc agatgtcgat ttcccaatac
//
LOCUS       KCKM01000119             807 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1899apa ultra-conserved element locus
            uce-388, sequence.
ACCESSION   KCKM01000119
VERSION     KCKM01000119.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 807)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 807)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..807
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1899apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>807
                     /note="ultra-conserved element locus uce-388"
BASE COUNT          235 a          127 c          178 g          267 t
ORIGIN      
        1 aatcaggaca cagctaacaa ggccatattc agttactagt ttcttgaatt tgggaataat
       61 ccaaatttat cagaaatttt aactccctgc ttgacttctt tacaattaca ttattgactt
      121 tgactagaat ttaccagttc ttgccaggcc ttagaacagc tcctgtaatg aaggggatat
      181 agtggagata acagtggaaa gttataatac tttgaagtct gttcagcagg gttttattct
      241 tctctttggc agaggctgga gggagctagt gcgtgtttgg tgtttttttt aatgcagttt
      301 aattgtgcca tggtattaag acagtacatc tttaagtttt catatgagag tatgagcttt
      361 ggtatgacag aatatcaaag tgaaaattaa tgtccgccac ttgtatattg cctagacgtt
      421 acattagagg gagaacaaca ggagcgagac gaagccatac atatgttaaa ttcacatcag
      481 taataaagat taagtagaag ttaatagcat cccagtcatg cttgtggagg taatctcctt
      541 tctgaaaatt caaaattaga tttggaggat cgaagcaaac agggggtgag actttggcgt
      601 aatattttaa tcaaattgtc atgaatgagt ggatacaatt aagaattctg tcagtcacag
      661 tgctgagccc cttttgttag tcagctgttg tgagggatgc actagggcat cgtgggtaga
      721 gattaaactt gacctttccc aggatcttca tttttgaccc tctggctagg ctttgcttgt
      781 cagatggcta ttatttatgt atttatt
//
LOCUS       KCKM01000120             938 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1915apa ultra-conserved element locus
            uce-4653, sequence.
ACCESSION   KCKM01000120
VERSION     KCKM01000120.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 938)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 938)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..938
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1915apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>938
                     /note="ultra-conserved element locus uce-4653"
BASE COUNT          301 a          240 c          134 g          263 t
ORIGIN      
        1 aaactttaac cagtgacagt gtcagcaagg aaacagactt tttataatca aaatgcaaat
       61 tcagtatcaa taagtatcgt tatataatgt cactgctaac agatttaacc tctgctatca
      121 atttttattt tagagcaacc tctttacctg acacactttc cccatcagaa tagcaaatgg
      181 ctcgtatcca tctctgccct tcagcaaaac atgcaaatga ccacaaatca acttccaact
      241 aagaaaatcc gtctggactc aacacatgtc cccgtatcgc cacaatggaa gcagccacaa
      301 ttaccagaac agttctataa ataatcacag ctctgctttc cttctgcatc tccctgcata
      361 caaaataaga gttctgctaa ttcaatgaga atgaaaacaa ctgtcctctc ctcaccgtct
      421 tttcttctct ctgcaataca tagaatatat gctcataatg aaaacatagg gcttacacag
      481 atatcagaat tcttcagacg tcctcctttg gctcttttca gaagcctgat ccaggtggcc
      541 ttcattagcc agacagctca gttattgtcc gcagctgcag cgcccagcac tgatctcata
      601 aaacatgtgc acactgagca ccgcagaatc actgctcctt tcctatccat gctctgctgt
      661 gagagcgttc cttctcttct ctctgccttt caagcttgca gcctctctgt ttccaagtat
      721 tctactgcaa ttaaattctc aaattttctc atgccagtaa aaaaaaaata aaaaaatcca
      781 gaaaaaacac cccaaaatcg acaccacctc caaaaatctc aacttgaatg ataaaaatgg
      841 aaaataaatc aggcttcagg taaatgttgt gagatgcttc ggttgatcat aaactgagat
      901 cgatcacaga aaaataccta gggctttttc ctttcagt
//
LOCUS       KCKM01000121            1008 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1931apa ultra-conserved element locus
            uce-708, sequence.
ACCESSION   KCKM01000121
VERSION     KCKM01000121.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1008)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1008)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1008
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1931apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1008
                     /note="ultra-conserved element locus uce-708"
BASE COUNT          300 a          196 c          182 g          330 t
ORIGIN      
        1 ttttccttga taccacatca tttaaacaca taccgtagct gaagacattc aggattacca
       61 gggacgtcaa tcaacatttt tggcctttgt aaaggatctt agccaaacat tttgtttaat
      121 taaactctag ctgatgccac gatgcgcaga gtagcactcc ccaaaaaagt gcaaaactga
      181 tgcattgtgc catctctggc agcatttgct cagtgttcgc tgcgaacggg gaggaaaaaa
      241 gataccgaat gcacggattg attttcaaat tacctcaata ttttgaaaac attttcacct
      301 gcatgctgag aatgctaaga ataggcagga aggcaattgt gcatttgcac agcctccact
      361 gcattcattt ataaattacc tcatcactga ctgaaattaa cactgattct tacaggcaat
      421 ttctcaattt ccaatgctaa ttacattttt tttactttta aattctgtac cacctgtttt
      481 gggcaagaca tcttaggcag cgcgaccgca tttaatcaca attttaatta accgccctgt
      541 agatgtgaaa aagaagcaat tataatgtag atgaatgatg atttttctgc attaaattgt
      601 tttgtttccc tggtatgttg attgtaacac agcacacaaa tacagtaact gtacaatttt
      661 tttctattgt aatttagtaa ttgtttttgg aaaaccagtt tgggaatgag tgacttcatc
      721 tgtttacaaa ttgattgata ctgttaactc actgattgct gcagcataca ttttgtattg
      781 cacagcctag cataaaatat aattaggcat gcacagactt tgcagcacca ttttggaatc
      841 tgaaaatcaa ctgtaaccga agtgtgtttt ccttgagcat cttagtatca gccggggctg
      901 atgatatgat aatcaacaaa caatgggctt ttcccatccc gctgctcgta gaaacccttg
      961 gatttaatct gatagtttca cggcataact ttggggttgg gttttttt
//
LOCUS       KCKM01000122             708 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1945apa ultra-conserved element locus
            uce-3061, sequence.
ACCESSION   KCKM01000122
VERSION     KCKM01000122.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 708)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 708)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..708
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1945apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>708
                     /note="ultra-conserved element locus uce-3061"
BASE COUNT          173 a          158 c          150 g          227 t
ORIGIN      
        1 ttgacgagat gactcgctcc gtatttctct ttaatgcttc ctctagctgc cagcttctac
       61 cctcgtgtca gctaagtcca ggtgtaaccc ttgcaatttg ttgacaaagt agctttaggt
      121 ccacccgtag gttgtcctct cccgctaaat ggcaaagcag cgagtgactt ccctcgcgtc
      181 ttcaccctgg aagcagctca ggaaaaacat ctcttgtaaa agtgtcgaca gttgcccaag
      241 tgggcttgag ctgtcacctt gttgtatctt accctcctgt attttgttct cttccaccag
      301 ctgatctaca tgatggctac tacatataac tatgcggttt tgaagtttaa gagtcgggaa
      361 gattgctgca ctaaattcta aattgtctaa gcccagttaa agagctgcgt tgcgtagctt
      421 gatataccac tgacacccta ggctaaaagt ctagctttct gaattttgtt acagtaattg
      481 taaatagctt cagtgagcat cgtttagctt atcagattaa taaagtgact tcttgtatat
      541 gaactatgat gtggatgaga tctggctatt ctttcatgtc gagaggattc agttactgta
      601 ggggtgttta taaataatca tccttctcag gtggggtgtt tccaggtcaa gcctccattt
      661 gcttcctaat ggtcacctct aaaacaaata ctggaacagt tcggggtc
//
LOCUS       KCKM01000123             358 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1961apa ultra-conserved element locus
            uce-5883, sequence.
ACCESSION   KCKM01000123
VERSION     KCKM01000123.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 358)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 358)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1961apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>358
                     /note="ultra-conserved element locus uce-5883"
BASE COUNT           64 a          123 c          118 g           53 t
ORIGIN      
        1 gccccgcagg aggatgttcc cggtgctgaa ggtgagcgtg tctgggctgg accccaacgc
       61 catgtactcc ttcctgctgg acttcgtggc ggccgacggg caccgctgga agtacgtgaa
      121 cggggagtgg gtgccgggcg ggaaaccgga gccgcaggcg cccagctgcg tctacatcca
      181 cccggactcg cccaacttcg gcgcgcactg gatgaaggcg cccgtctcct tcagcaaagt
      241 caaactcacc aacaagctca acggcggcgg gcaggtaaga accggcaccg ggacccgcac
      301 cggcctgcgc ctctcccgcg caccagtcgc ggggtgtgac cgagccactt tgatgctc
//
LOCUS       KCKM01000124            1046 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1975apa ultra-conserved element locus
            uce-2476, sequence.
ACCESSION   KCKM01000124
VERSION     KCKM01000124.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1046)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1046)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1046
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1975apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1046
                     /note="ultra-conserved element locus uce-2476"
BASE COUNT          325 a          215 c          188 g          318 t
ORIGIN      
        1 ttattgcagc caggttttct atcaggaagt aggaaggaaa caagattata aaacaggtgc
       61 tgtggtatta aacatctcac tttaaagttc aggccgtaac aggagtagga tacttagagt
      121 ggaacactga tgggccatga cttatattct ccagtaaagg actagtgttt ggaaaacatg
      181 tgggtagtaa accattagaa tgccaatgtg gtttcaactt aagttgtcct atgaaaatga
      241 gaaataggag ttttaccttc cgcttctgac cccaatattt tcttcatctt cgttgcacgt
      301 atttaacaac aatgcagaga atcagattgt tgagcaaagc tattcagtgg tcaaatgtgt
      361 gttgtcagtg acttcatgaa aaagtcatta gctctcctcc cctcctcttt cactgtcagg
      421 cagaatcatg tcataaatat agccacttgt ctagcaggat atcaatctat ccaggtatca
      481 cccacttcct gtctctggcc atatgtttct gttatttatg tcaagaaaat agcatttaca
      541 caaccgctgc tagttgttta cagaagttta actcctgtga tacagtcccg cttgtgttgc
      601 atgcttttag cccatagata atacatgaga ttgtacattt taaaatatgc taccacatgc
      661 atgatagaat aaacacagac ctgaactgac agcaccatct gccatacaca gttgatgtca
      721 ggggaatggt ctctgcacaa tactctgcta ctcccctatg agataaggct attttttctc
      781 atagtataac tacactaaat ttgacttgct catttagtac tcaaattgtt aaaaatctca
      841 gaaacagaag ggactcaggc ctcctaagaa gcactgcaga ggaaaagtgg aaattgaaca
      901 attctcatat acatttttct tgctcttacc actagtcaca ttcttgttta catacttaca
      961 ccagaaataa acctgcgagc aacgtatacc ggacacctag atactcaatg ctctgaagtc
     1021 atggaaaatt cataatgtta atcttt
//
LOCUS       KCKM01000125            1150 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 1989apa ultra-conserved element locus
            uce-1804, sequence.
ACCESSION   KCKM01000125
VERSION     KCKM01000125.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1150)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1150)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1150
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1989apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1150
                     /note="ultra-conserved element locus uce-1804"
BASE COUNT          308 a          265 c          246 g          331 t
ORIGIN      
        1 aatgtggccc aggaagctac acaaactttt ccagtctgtc ctgggcacca acacgtgctt
       61 gaccaaccca gctaagactg ctcatccatc tgttgctctc ttccctttga accctaatcc
      121 tttcatctcc acatctccct gcccagagcg tgctgcctgc cagcagggat ggtatggatc
      181 tcttcaggga cattccacgt cgacatcccg gcggttccac agcaaaagca gctggtgacc
      241 ctgccgcacc tgaaggaacc gctcactgag ccaggccccg ccaggcgcga gctccccttc
      301 tcctgcactc caacaggctc attcctggag ccacggattt atttaatgtt aatgtcttgt
      361 cgtcttgaca ttcataatgt gctaagctgg gaaagtaatt aaagttaatt tctgctcggg
      421 ggaggatgag aaaaggtggg ggggagcatc ctcactgtaa attcttattc atatttcttt
      481 cctgttttgt gattctcaat cggagttttc taataacaga tcatttcttt ttgtctaact
      541 ttaatctggc cctgcttgac aagcaccatc cttttcattg aagggtaaga ccacttaaag
      601 aaaggccaat aagcccttgc actgctcagc tgactagggt gatttgtcac cctgtgcagt
      661 ggtggtcaca ccaatggatt tatctcaagg taaatggaga tgctgagacc tgggacctgg
      721 agctttgatt aaggccccct ttttgtagtg ttgatagatg ttgcttgtgt ttatctattt
      781 gaaatgccac taaatctgtg aatacaatgg aaaaagagag tagtttgcag ctgaaaacat
      841 attagtgatt tatgtttcac taagaagcac aataaagaga cagaggctat taagaggagc
      901 tattttcatg agaaatagtt ctgctttaaa acattatcaa ccacaccttg ataaagacct
      961 acatgcatgc ataatcgtgt ttacttacct ctttagctga gtgccatata catttggaat
     1021 gcacagcctc aaattattaa taagccggca gccgctttgc catgcaaacg cataagaata
     1081 ggatactttg catgttaatt gtctttcaga gaaaaagcaa gtgtaatgca ctgattgggg
     1141 acttcagatg
//
LOCUS       KCKM01000126             579 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2004apa ultra-conserved element locus
            uce-5788, sequence.
ACCESSION   KCKM01000126
VERSION     KCKM01000126.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 579)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 579)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2004apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>579
                     /note="ultra-conserved element locus uce-5788"
BASE COUNT          195 a           88 c          102 g          194 t
ORIGIN      
        1 atatttcgta actccttttt agctcaatac ataagcaggg ctgattaagt tatcttgaca
       61 gaaatatttt gatgatagca aacaaactta gcagtaagcg tttgacagct ttatttatta
      121 atatgataaa tgaattgtga gatgtgtgat tgtgtgatga tgcattcatt tagttgttcc
      181 tttttctctt ttactaatct ctgtcacgtt agatttataa atggaacgga gtgacctttg
      241 aaactgtgat ggaaatgaag agataaacac aacttgaaag gacaaaccaa ttaatataaa
      301 tgtgttacac ataaagaact gatttcaatc aattgctatc tgtgtaaacc tttgggcact
      361 tagctgaacg aaatggagca aacagattat gtgacatagg gacaaaatat acatttaact
      421 ctcttgttat gtagtgcaga tatcatccaa aatatatgta acacatcagg aagaccaggg
      481 tgttgcttca ttgtgctaca aagcccactg aaaagttaca gtccttaaag attatctttt
      541 tctgataata aaagccctac tgctgatgtt cttaatttt
//
LOCUS       KCKM01000127             672 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2019apa ultra-conserved element locus
            uce-5008, sequence.
ACCESSION   KCKM01000127
VERSION     KCKM01000127.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 672)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 672)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2019apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>672
                     /note="ultra-conserved element locus uce-5008"
BASE COUNT          181 a          195 c          140 g          156 t
ORIGIN      
        1 agagcattta atcagtacag caaggatagc agcacaatcc tcttgaacca tgtggattat
       61 ctctgagagc atgctcctac ctgaggcagc acctcggggg acatttgtgt tgactcacag
      121 tcctcctctc cctcatcacc catttgaagg agacagtcct gcaatgatga gaaagggacc
      181 cagtagggct aggagtacac agcagggaaa cctgtcaaaa ggtcttctcc ctttgtgctt
      241 gctcctgggg agcctatctg gcagagcaaa gttctctgcc ctccctcctg tcaccctccc
      301 tttccccacc agcagccccc agcccgacag agagaccagg ctggatggag agcctttctc
      361 tccagcgtgc cgcactatga cagatgattg actcgaaaca atatctaagg cgatcaggat
      421 aaagtaccga ccatttcaag gctcagcaga attcaaattc taattagact tctcaccaca
      481 ttccaaataa aaattgttcc cctgatatcc tttttgccta tcaggtgtct ctccctgatc
      541 gctggaacaa aacgcataaa gaaagtgatt aaagccataa caaaggcata aaattgaaat
      601 tatcgctggt atcacatctg ggagcagagt gtgtcaccac actgcccccc tcccctcgga
      661 gcgctccctc cc
//
LOCUS       KCKM01000128             996 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2035apa ultra-conserved element locus
            uce-3130, sequence.
ACCESSION   KCKM01000128
VERSION     KCKM01000128.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 996)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 996)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..996
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2035apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>996
                     /note="ultra-conserved element locus uce-3130"
BASE COUNT          275 a          221 c          208 g          292 t
ORIGIN      
        1 gtgagaatgt cggattttca cgctgcagca ggagagcaac tctggtgggg ttacgtctgg
       61 acaaaaatac ctctttaatt caaaggggat ggggccagag gtgaaatcac tgcagagtct
      121 ggtccagcac ctttctcact gataaggctg gcagggatgt gcaccttggg gtggatccag
      181 ctttcaaacc aggacaatgt tgccaagttg tcctgcacag aggtcaggag tatgcgggtt
      241 gcttaaaggc ttagaagttt cccttagttt ccactgacca attctgtatt ctccagagcc
      301 tccttgttat cagcacagac catcgccaaa aattaaaaat aaagtgggtg ggaggaggag
      361 aggagggatg agaataacaa gctatacctg caacagtcct tgccgtatat tccctctgtg
      421 tcccaccgac ggtgtcacgc acaagggaaa ttgttctatc agtgactatg ttagattcat
      481 gaccccacca caaccttgaa ttggccttta gttgtcgctg atgggaactg aagaacagct
      541 cctgtcgaca tgattgctgc tctccaatga atcagaacac gcagggcaca gagcagcaca
      601 ttaaactagc aacagaaata tatcactgta cttttatata gatgtattgc ttttgcccag
      661 gcatataaat gattgggcta tccacttatt ttttttccga ggactataaa ttaaaaataa
      721 gctaagggtt ttgaaattat gttctctctc tctccccccc ccccccttct ctcttctttt
      781 tttaaaagct ggatagctat tttaggtcta cagtaaaaca ttttaaaggt aatcttatca
      841 tctatgtcta ctgaccatcc ttttttctaa aagaaatcta ctactgcagt tctgcctcag
      901 gtaatataat actcagtgtg atcacactat gtatccccct gcttcttttg ctgctaatga
      961 acacttacaa ggctgtttta atttagtagg acaaat
//
LOCUS       KCKM01000129             633 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2051apa ultra-conserved element locus
            uce-4694, sequence.
ACCESSION   KCKM01000129
VERSION     KCKM01000129.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 633)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 633)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2051apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>633
                     /note="ultra-conserved element locus uce-4694"
BASE COUNT          185 a          109 c          130 g          209 t
ORIGIN      
        1 tttttggttt cgttagaaac ctggaacaat aactttcccc agcattctta ttatttttca
       61 aacattggta ctttcagcct ccaactttgc aatatggttc ttttatatgg catttagatt
      121 ttgagagatt tagttgatgg aaaaatggga agcatggaaa gaatgagcta attaatgttt
      181 cctcaaccta tttaaagtat gctgttgtat tagagttttg ccacatctgt aatttatgcc
      241 tgttaaacct ttgttttatc atctattacc aacttctagg ctgctgtttg cacctactgt
      301 ctgcaacaag catttctttt tatatggaga aaaaatgatt gcagttactt ttactgtacc
      361 cgaaaaggag aatgagattt gcaaatgata aatggggaag ttgactagct aactaataaa
      421 gatttgtctt aatcaagtat gatttgtcag aacaggagcg cactggggtc agggcacacg
      481 caatgaataa tacagcattc actggagaaa aggaccaggc aaaaggcctc ataaatatgc
      541 cgcgattacc cattgctaat tcgtattcaa agagtgagtt gcactgaagc cagcttcggg
      601 gttgctgagc tgttcacctg ctttgtgggg ttt
//
LOCUS       KCKM01000130             976 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2065apa ultra-conserved element locus
            uce-1339, sequence.
ACCESSION   KCKM01000130
VERSION     KCKM01000130.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 976)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 976)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..976
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2065apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>976
                     /note="ultra-conserved element locus uce-1339"
BASE COUNT          281 a          177 c          189 g          329 t
ORIGIN      
        1 ttttaaccat aggagttcca tctggaatat gacaaactag aagaaaggcc tcatctgcca
       61 tcaaccttca actacaaccc tgctcagcaa gccttctaaa gacttccctt ttcttggggt
      121 atggctgtct cagcacaata ctcaacataa ctgcagaact gatgtggctc aggcatcctg
      181 gttttaattc cttgaggatc tggcaattgg ctcatgtgaa gggtcaccat ttgaggtcct
      241 gccttactaa ttatgtgctg cccaacaact aaatttgtaa ttgtttttct ttagtttgag
      301 cagggtctga atttttgttt ttgttttgtt ttttgccagc agacaagctt gggtctgtaa
      361 agacaagcga gtacactgac aaaagtttac cacttagttt tccaaaatgt aaaaacaaaa
      421 aagagaaaaa aagacaaaaa attagacaac aaaatttgca ttgttcattg tagcactatt
      481 ggtaataaaa aatgtttgtg catttttatg tgaagatcct tctcgtattt catttggaaa
      541 gatgagcaag gtttgcttcc ttcattttac ttccccttct gtttttgaaa ggcagttttc
      601 gccaagctta atgcaagaat atctgactgt ttagaagaaa gatattgcca cagtctctgg
      661 ttagtttcca gagttgtgta ttactgagct tcatctttcc agaatgagca aaacactgtc
      721 cagtctttgt tacgattttg taataaatgt gtacattttt tttaaatttt tggacatcac
      781 atgaataaag gtatgtatgt acgaatgtgt atatattata tatatgacat ctattttgga
      841 aaatgtttgc cctgctgtac ctcattttta ggaggtgtgc atggatgcaa tatatgaaaa
      901 cgggacattc tggaactgct ggtcagggga cttctttgtc gccctgtgca ctaaagggcc
      961 agattttcag cagcca
//
LOCUS       KCKM01000131             476 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2081apa ultra-conserved element locus
            uce-6870, sequence.
ACCESSION   KCKM01000131
VERSION     KCKM01000131.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 476)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 476)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2081apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>476
                     /note="ultra-conserved element locus uce-6870"
BASE COUNT          154 a           76 c           91 g          155 t
ORIGIN      
        1 agtaaagaat cggaacttta atgtttacta ttttcttatg ctcatattaa tctgttttat
       61 gcatagtatc caactaagtt taataagcca gtaaagaaga aggacggata attagtttaa
      121 gcaggtaaat gctaattagg aaactcctga aaggcatcca ttatacacta gcttaaaaca
      181 aattttacag ccctggttag tggtgtaatc caaattctgt caaggcaact gcattttctg
      241 taattgagat gtgtatgttt gctttgcata acagatggct ctgtatgctt agactgatag
      301 ctaggaaaat aataattgca ttattctggc caaaagaata ttagctcttg ggttttggcc
      361 atttcagtca gtcctcctgc cagcacagca tatgcacata tatggattgg attttcaagg
      421 aaattgatgc atctggaata gtgtggccat ctgaaatatc atctgttcaa gaaaaa
//
LOCUS       KCKM01000132             535 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2095apa ultra-conserved element locus
            uce-4512, sequence.
ACCESSION   KCKM01000132
VERSION     KCKM01000132.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 535)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 535)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2095apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>535
                     /note="ultra-conserved element locus uce-4512"
BASE COUNT          150 a          113 c           91 g          181 t
ORIGIN      
        1 ctttaacaaa aaggtatgtg cttccttgaa tttgatgcta ctcgcttaat cctctttctg
       61 ggatatgtag agaatccagc gttcattgga gtgcttatca caacaagtag cagttgcaat
      121 atgttgcatc atttggcaca ctttcaggaa aatggaatgt ccctcccttt ctaacttgaa
      181 ctagcactaa ccctattgat tctcctatac caatgcttac ttgccttatt tagtagtatg
      241 gggaaagata atggtatttg ctgtaaatct gatatgaaaa ctgcatttca tttttctgct
      301 ttcaagctgc gagctatctg taagaaggta ttacttaatg ctttttacct tagcatatag
      361 cttacagtgc tgtaagcata catagcataa gctatcattt tgcagcttca tagcacagtc
      421 acatttgctt ataacaggag ctctacaaac ccactgaaaa tgcattattc ctagttttaa
      481 aaggctgccc gtttctggtt tggctgcttc gttcacataa acacaaacct taccc
//
LOCUS       KCKM01000133            1076 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2110apa ultra-conserved element locus
            uce-1157, sequence.
ACCESSION   KCKM01000133
VERSION     KCKM01000133.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1076)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1076)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1076
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2110apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1076
                     /note="ultra-conserved element locus uce-1157"
BASE COUNT          317 a          193 c          211 g          355 t
ORIGIN      
        1 aaatacagac gatattatta tagacacatc tcactaaacc ggtgccagta agaatagctt
       61 gtaactggga atgccagaag tgattattgg aatgatcaga tatatgttaa tatatctgag
      121 tttgtgtcag caaatcaaag gctttgactt tcttaaattt atttaataat gcaattgcaa
      181 attgaaaata cagaaatgag cttcactgcc tgatattttc cacatgggag gaggatgcta
      241 aacctttaac ctgggctatg ttgtgcgcta agtgatctct tttataccag agtatgttac
      301 gagtatcagt ttgctctaaa tatattgctt ttgaataact cctggcaaag aaaaggaagg
      361 tctgaatata ccacgtatct tttattgctt aattgtttgc actgattgta aataataata
      421 aagcagactg actacggaca ctctcctagt aaattctagg agcactgata tggcagaatt
      481 tctcagtttg atgtggctct gtctttgaca gttcttctaa ggtaggttat tttggagaaa
      541 acatatgttt ccattttctc tccctcggct tcccttttag tccccaggct ccactagggt
      601 cacagcaaca ttaaggcttt tgtcactgtg attaatagct ctttagatca tctttaattc
      661 actcactaat gactgagggt ctttctgctc tccaagtaat cgcgtgatgt atgagccgat
      721 agtacacctt gtggcagagg tgaaaatcat tcaggcaatg caaatattgt cacggggaca
      781 aatgttttcc ctgttaataa aaattaatga attctaccca ggagctagtt aaagaagctc
      841 tagtgagaga gatccaaaca caaacaagtt cttgctgctt ggaaccatca attcagtctt
      901 tctaggtatg tgaggataat tattattagt atttctgcat aatagatgag agagtggcag
      961 gttgatttaa ttatacaaat gcattacact gcagatagat ctgtctttca gttatgccca
     1021 ctcactggcc ttctcttgag agctgttatt ttgctttgcc atggttatac catggg
//
LOCUS       KCKM01000134             965 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2126apa ultra-conserved element locus
            uce-2367, sequence.
ACCESSION   KCKM01000134
VERSION     KCKM01000134.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 965)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 965)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..965
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2126apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>965
                     /note="ultra-conserved element locus uce-2367"
BASE COUNT          322 a          155 c          177 g          311 t
ORIGIN      
        1 tgattcgtca ttaaactttt aagttttggt tgaaggtgaa aaaaacagtg atgtgatgat
       61 gagtgtctga aatacaggta aactgtgcca tagtactact gatattgatt tgttatgatt
      121 aataaatatg attttatgca ttacccatgt actgtatcta tagcagtggg ttttttagag
      181 cagaagaaaa tttgctcttt atttttcgtt gactattttt gtcaatgata aataaagaac
      241 tttaacagca gtgtgaatac aggaaagaca ggacttgaaa acagaaacat agcagtaatg
      301 aataactaca cagtgaacta cacatatgca gccatcttaa catttgtaat ggtgctaatt
      361 tcctactgtg ttttaaagta tgattccaca tgaactctca aaaaccataa gagcttggca
      421 tgtaaagtaa attgtttgtc acttgctgat gacctgccat atttattgtc aggagaaatg
      481 gacattagtt ggaaaaccag ttgttaaagg ccaaacaatt ttaaagatgg caaagatgtg
      541 caagggcttt ccttttccta acaatgagcc accccttcag acatcaaaag acaagataat
      601 aagacacttc aagcacaatt caagattata ttcaacatct aaaggctcat ctcttgtcag
      661 tttgcattta ttctcccagg gatgtgatgc ttctatcatc attctgtcaa gaggagtctg
      721 gcagaagcaa tgaggacccc tcatttcaca cacttagtgt tttttatcac atagcccaca
      781 ttcattctga ttcagctaaa atggagagat aatttgaaga aggtcatgca caagtacaaa
      841 atcttgggct gatttgtgtg attaaaaggc attacaattg cacatttatg ttagttctga
      901 gatattctgt cagtttattt agtaacacac tgttgaagca ttaaaagtgc ttttaaagga
      961 aattt
//
LOCUS       KCKM01000135             494 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2141apa ultra-conserved element locus
            uce-3246, sequence.
ACCESSION   KCKM01000135
VERSION     KCKM01000135.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 494)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 494)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..494
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2141apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>494
                     /note="ultra-conserved element locus uce-3246"
BASE COUNT          167 a           77 c           67 g          183 t
ORIGIN      
        1 atagataggt ttaattcctc aagccaaaga aaaattatat catcttaagt attttccata
       61 tttattatat tgatgagact tggctgcaga ggaaaaaaag gaagcaaaat ctcttgtatt
      121 gcaagtttta aatgtacgag gctaaggttt acttaattag aacctccagg caataaagga
      181 gccctttttt aaattctgtg aatcttaata tgctaaataa tgcaaagctt caactcttca
      241 agcatgagac acacatctgg cagcttaaca tttaaattac agaaaaaaaa ccacttcagt
      301 agtaattttc atgaagaaaa gaatgggaaa tgtattacaa ctaaatttaa tttcttttta
      361 gatttttcat cctgtctaat tgcaagcatt tcccatcttc tcatttattt atttattttt
      421 ttttttctct actttttatt gatctttaat ttgagcagct tcttactgtt acagccattg
      481 aagaattaca ttgt
//
LOCUS       KCKM01000136            1090 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2156apa ultra-conserved element locus
            uce-865, sequence.
ACCESSION   KCKM01000136
VERSION     KCKM01000136.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1090)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1090)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1090
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2156apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1090
                     /note="ultra-conserved element locus uce-865"
BASE COUNT          322 a          212 c          221 g          335 t
ORIGIN      
        1 caggaagagc actgcagagc tacttcctaa aggaactctt cttgcccacc ctttccttga
       61 cagccctgaa agaattatgt gcgttatgta cgatggggga aggagagcca gattgcatgt
      121 cggtgcaggt cacagttaca atgcagcaga tctcaaaaag gtgtaaggtc tgataagaag
      181 caagtcttct ctacttgctg tgtcaaatca ccaacagttt atctaaaggt ccatgccctt
      241 gaagcacata tatatcttgt ttttaagcat aactggaaat acctttctgt caagaaaagt
      301 tgtctggcca tatgacttta cgtggcgttt gcagttattt ttccagtccc aaagataatt
      361 agtacaaggg cagtttgcca agctaaagct gagagaatat ccttcacagt ctttctgggc
      421 atttgtgtcc ttttccaatt tttttgctgc tgtcaccaga ctctggcatt tcttacccaa
      481 ttcatttgct ttctgtggta atcatatgca atgaagatat gcatggccaa catttaaaca
      541 ggctgcagat caattagtgg tcttaagttt atctgatttt tatcaaagaa gacagagctt
      601 tgggtcgatt gtcagagcct gtgtcaagtt gaccttttca gagacgtcta cattgccagt
      661 cccttgggca acttgttgtc ccctgttagt ctctgaatgg cagaagtctg ttctgctcaa
      721 gcacaaagta tacacagatg tctatattac attcttatag gtttgacagc aactgcatgt
      781 tgtatctata aactgtcctt tagcagtgac acttcctcaa tgatgataag ctaatttatg
      841 caactaaatc tcctttgtgc agaaatgaaa gctaattgag tcattacaaa gtaattcagg
      901 aaggaatacc ttgtataaat tggcttactt tataaatcct tctcaagtgg ttttcatgca
      961 tcctaagtgg tgctaagcag ttttgctgcc attggatacc caggtaaaaa agagagcttt
     1021 aaaaacgtta ttttaaaacg gcaaagaaaa gaggcaagaa aatgaagtta aaaaagagag
     1081 tgcgtacaca
//
LOCUS       KCKM01000137             788 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2172apa ultra-conserved element locus
            uce-280, sequence.
ACCESSION   KCKM01000137
VERSION     KCKM01000137.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 788)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 788)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..788
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2172apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>788
                     /note="ultra-conserved element locus uce-280"
BASE COUNT          255 a          126 c          119 g          288 t
ORIGIN      
        1 ggatctttct tttattttcc ttttaaacta atgagttgca ttaatccagg ttcattttta
       61 taagcctctt gggtccaaat gtaaaggaca gtcattttag aaaacaataa attaaaaaaa
      121 aaagcatgta gcctgcatta agtgcacgta tttcataaga cctaggttaa tacaactggc
      181 atctagttta attaatcctt gttagtgtaa cgactaatat ccctccctag tatgtttcct
      241 ttaaacatta gtatgttaat taaatgttgt ttttttaagg tttttttcct ttgtacttca
      301 atatagcatt ataacacgta aaactattct gaacaactac cttatagaga tgtttcctta
      361 caatatctgg tctcttgcag aaattctgaa gccttttaaa aagctgttca ggtgtagaat
      421 acagatattc agctgcagga aaaacagata catttttaat gaaacaaaaa cctcaaagca
      481 cacactcgat attagtcact ttactaatta aaaatgcata ttgctctgtg ccgcctcgtg
      541 ttttacatta tttaagcatg attttataag gttacctcag ctcacaagga tgtttaatgc
      601 taaataagac tgtgtagttg tgctgtttag acatctcctt tgggtgatta aaatacatta
      661 ttctaatgta acacaatgca tatgtgatac atttagtgat gagatttttc aaagaactgg
      721 tactacatta gtgtgtatcc tgtaccgcag ttgcatacta ttaagtatta aattgtttat
      781 ataatttg
//
LOCUS       KCKM01000138             784 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2188apa ultra-conserved element locus
            uce-7482, sequence.
ACCESSION   KCKM01000138
VERSION     KCKM01000138.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 784)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 784)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..784
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2188apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>784
                     /note="ultra-conserved element locus uce-7482"
BASE COUNT          178 a          212 c          244 g          150 t
ORIGIN      
        1 gatgtcccag agagcctttt tggggtgatg ggtgacgcca ggacacaggc aggacccgga
       61 gagctcagct tctcaggagg aggtgatgga gaggaggtgg ggacccctgt cctgcctagg
      121 ggacatgctg gcagcagagc tgtcccagtc cccagcaggg aaggcagaag gtggcaggat
      181 ccatcctttc ccctggcagc gaggttgaag gctgcagagc aaccccgggg gagccggggt
      241 ccccagcgct cccctccccg cccctcattc ccagctcatt aaggctctcc cattattctg
      301 acatttgtgc gcgtcacgta ccgggaagaa gtaatttact tagaagaaat taaaagttca
      361 ttttaattga gtgcacactg cagtatgcaa atgcggggcg cattatgtac actgatgcag
      421 agacaaaggc tgtaatcaac tgttaaccct ctgcgagctg gccccacgca cgggcggcag
      481 tgccggaacc cctccggcca tgctggaaat cccatatcca aattcagggt gtcccctggc
      541 cacggggctc gacgagctgg cagcgtgtaa aggtgtagga gaaaaccccc ttcacatctc
      601 tccgcgccag ctcagaagca ggagccggac cgggatgccc agcaacggag attgtccccc
      661 aaatctctgc cacgcgctgt gatggatcca agccagcgag atgggacgga tggttggggc
      721 agagcggggg tgattaagtt cttttgggga gcccagatga gatggggatg caaattatgg
      781 cttg
//
LOCUS       KCKM01000139             377 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2204apa ultra-conserved element locus
            uce-6083, sequence.
ACCESSION   KCKM01000139
VERSION     KCKM01000139.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 377)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 377)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2204apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>377
                     /note="ultra-conserved element locus uce-6083"
BASE COUNT          111 a           81 c           71 g          114 t
ORIGIN      
        1 gtgcccctcc ttccacttgg attgctcaag aaatctcatc tcaagagggg aaatgaattc
       61 tcaattgcaa cgtgcctagt aattaactgc actgtaattc tgatgcgcag cgctgtcacc
      121 caccattggg tgggagtgga aaaggcactg cattttgttg atggttgaac atttgttttt
      181 ctcatcattt tgacaccaga ggtaattgcc attcctgaaa cattctcttg ccaccattac
      241 aaagcaactg ttagggacaa attaattatg aagaatctca ttatgacaga ttaataggcc
      301 aacagagaag atttcttttt cttctttcag gcaactgaat agtaaaatct aacagctccc
      361 atattaccgt taggaac
//
LOCUS       KCKM01000140             383 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2219apa ultra-conserved element locus
            uce-2255, sequence.
ACCESSION   KCKM01000140
VERSION     KCKM01000140.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 383)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 383)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2219apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>383
                     /note="ultra-conserved element locus uce-2255"
BASE COUNT          127 a           78 c           83 g           95 t
ORIGIN      
        1 aacataaaat ctggcccttt gccagatttc tacagggcat tagtaacaaa ctggtgaagc
       61 tcattaaaaa aaaagagaga gaaacctata accattaaaa gtccattaag cagcatgtca
      121 ttttgtaaag ctaaatagcc cacagtaatc aaaagcatat gaaccccagc tgggttaccc
      181 ggcaaattgt ttcgatttag gggggagaat tcatcaagaa agattgttcc taggattggg
      241 ttgatttttc tccttcagtt gctggctcca cgtcccatta taattacagt gattgatgca
      301 ccttgcagac aaaggtgaag agtgaccaga acagccggaa catctgctcg atggaagaca
      361 cggctgacgc agaattctgc aga
//
LOCUS       KCKM01000141            1269 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2234apa ultra-conserved element locus
            uce-2896, sequence.
ACCESSION   KCKM01000141
VERSION     KCKM01000141.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1269)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1269)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1269
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2234apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1269
                     /note="ultra-conserved element locus uce-2896"
BASE COUNT          295 a          342 c          295 g          337 t
ORIGIN      
        1 agattaagct accagtgaaa gaaagtgttc cagtgaagcc agcgcttcaa ccagttgtaa
       61 actgctcctc tcccaagtcc ttccacagca agttggcatc atcaaaccga gcacatctga
      121 ttcttgacat tcccaagccg ttgcctgata gacccacgct ggcctccttc tcacccacta
      181 ccaaaacaaa gacactgctt gagccacagt ctccgcagtc acctgctggg gcctgtaaaa
      241 agaaaccctc ttttcctgag gtccgagcct ccaagaagga gactcaaact gctggctctc
      301 tggttcctgc tagagagatc ccaacaggac ttgctaagga gagctcagcg gagaatccag
      361 gttgccaaga tgagccaggg gtcattaatc caaaactgag ggagttgtca gaggtccagc
      421 ccctaaggtc tcctgagggc atgctgccca ggtgcaggga gaggatcacc ggcatcgcct
      481 gtgtgctaga caaccaacct ggactttgcc cactagaccc catcaggccg aggtctccta
      541 catctctaac tgcctcggca caggtctcag gtgtgcatgg atacccatct cttatcttcc
      601 cctttctgtc tcctgtcttt gtgaatcgcc tcacgatccc atcacatttc tttacgtcca
      661 gcttctggcc tgtctcgtcc tgtctgcacc tgtctcgttc cataagtcat cccctcaatg
      721 gtgagacact tcttcaacct gacatctttt tctcagtctt taatttccgt ttcctctggg
      781 tcctgtgtct gaaggtcctt gttagctgaa tgttttgtag acctcggcac tctcgtgttt
      841 tcagttgtac aattgcctgt ggggatcaaa cctttttctg gtcaatgcta aaagctggag
      901 cactgggaat ccctgtgggt gtgtaggtta catcccccga gcccatctca gagcatgtct
      961 gaccagcaga tgaaggtgca ggcaaatatg tgcaagctga acttggcaag acaggtaata
     1021 gaatcataga atgtgttagg ctggaagaga cctttaaagt tcatctagtc caaccccaaa
     1081 tagtgacagt gaggttatga caggcagctc aggctttgct ttgtttatgt gcaagtgtgc
     1141 aaggtccaga agtgttttct tgcctgaggc aaggcttgac caagatgact tccttgcttg
     1201 tagccatctt gagagtgaga aagtcctgtg ctgctgtcac tctgctttct gcaaacagga
     1261 tatgcagtg
//
LOCUS       KCKM01000142             792 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2248apa ultra-conserved element locus
            uce-8011, sequence.
ACCESSION   KCKM01000142
VERSION     KCKM01000142.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 792)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 792)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..792
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2248apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>792
                     /note="ultra-conserved element locus uce-8011"
BASE COUNT          266 a          166 c          138 g          222 t
ORIGIN      
        1 ttttctaatc acccggcaca caatctcaca actacaaaca tgaagacaag aataacatgc
       61 aaaatattta aagatttctg aaaacaagaa aacaaacaaa caaacaaaag caacagtact
      121 ttttttttaa gtattccata tacacaccta acgttctgtg ttgtgaacaa ggtggaaaga
      181 agacacttgc acttaaatct tgaagcatcc cgtcccgatg aacccagaga aactaatttc
      241 tgccatcaga aaagtactcc accagaacac caaataatta tatgtgctgc tctaaaggaa
      301 acagcaagcc cagttctggc tgcatgtagt ctctcgaggt acaataatat aaacctgatc
      361 aattgcaatt aaaatctgaa cagaggctta gaacttgaag tcttggtgca ttagttcttg
      421 ccaaaagcag atgtgattgt gagctggaag caatttctcc tggtaatttg tgatgacact
      481 gggtagagca gccccagagt ccccaaagac aaactcatca gaggctctaa tgtatgcatg
      541 acacatgagg tggctctttt agagctcaat taattgggct gaacattaag atagcaagtt
      601 caggactttt tttttttttt ccccctccag agttgttttt cctcttttta caagcagttt
      661 tttcccttac cttctgcaag ccatgtctcc tgtaattggc tcagatcttg aaagagttct
      721 gcaaaaagat gaaggcatgg ataaaagact cacaccttta atctcttcat aagattgaaa
      781 tatgctcgaa aa
//
LOCUS       KCKM01000143             472 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2262apa ultra-conserved element locus
            uce-3887, sequence.
ACCESSION   KCKM01000143
VERSION     KCKM01000143.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 472)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 472)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2262apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>472
                     /note="ultra-conserved element locus uce-3887"
BASE COUNT          149 a           86 c           97 g          140 t
ORIGIN      
        1 tcatctttgt ttaacgttgc cttttatgtc gagtttcatg aattgctaag cctgacaagg
       61 ttcactggga gtcttttaac tcccacccac aagttctccc tggatgtcat gtgactggca
      121 gtatagaggg atcagcaatg gcatttatgg ggaaagcggg aagacaggtg tcagaacggt
      181 ccagcaggca aaccgaacga acactaatca gctctggtgt tcttttacaa tccatatcta
      241 attcacaagt ttcattcctt ctgaaaaaca attactaggt tttgaagttc attgtgcatt
      301 tactcaactg tctcttcaca ttaatgtaag tgggaacaag aaaaaaagag tcagcaggga
      361 agggacatca aaagatctta gagcagatga aggctttatt ttaaagtaat ataattacag
      421 atgagcataa tgttttacaa taaatttaaa tgtacaggta catccttatg cg
//
LOCUS       KCKM01000144             945 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2292apa ultra-conserved element locus
            uce-1915, sequence.
ACCESSION   KCKM01000144
VERSION     KCKM01000144.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 945)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 945)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..945
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2292apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>945
                     /note="ultra-conserved element locus uce-1915"
BASE COUNT          247 a          186 c          227 g          285 t
ORIGIN      
        1 gtaacgtcac tccccactgc catgtgtgcg tgccatgagt agtttccttt ttctgtgcat
       61 tataccctgt cgcaggagtg aagttctgaa gctctcctac aagcactgga caaagtagct
      121 gggggacagc tgagcgctgt gtaactgcac aggatacagg ggaattgcgg tgtgtgagca
      181 gacagcccat cgttcattct ggtggtttta taaacatgca tacttgtatt gcatgtgtaa
      241 ataataccag gatatgttgc ctgcacatga tgtatgtaac cctgcgcgac ggggtagggg
      301 atggatacca aggctgctta atgggctttc ttaatttagc aaccattagt gtgcctaccc
      361 gtcaaacatc tttaattcta tgcttcagtg taaccagtga gtttatttgc agtgctcctt
      421 gcaggcatag cttaggccaa gtacaagttg aataaccttc aggaaagctg tgctgtcctt
      481 ctgtcggccg ctgtctttga aaattgcctg cagagttagt gagcaggaac agttaagatt
      541 tacaaacaat gatgaagctt gtcatgcatc tttcaccatt catcatctgg gtgccgtggc
      601 tgggcggtga agtgttcttc ataaaaacca gctcagtgtg aaatacacct cgcagcaatg
      661 tttactgctc tgaaactcgt cagcagccct ttatagtaaa tccagattgc gatgtgacat
      721 tacagtatat cattgcagag cgcgctgggg tttacactag gaatgagtgc agttcacacc
      781 agatgagatg tcgaaattga gttatgtagg aatttggctg ttatatgggg atagcttttg
      841 ttttctgagg actgaaagtt agctttatat atataatata tataatctac acatacctgt
      901 acttgtgtgt gggtgcctat atcaatatag agatatatat acatg
//
LOCUS       KCKM01000145             416 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2308apa ultra-conserved element locus
            uce-3757, sequence.
ACCESSION   KCKM01000145
VERSION     KCKM01000145.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 416)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 416)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2308apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>416
                     /note="ultra-conserved element locus uce-3757"
BASE COUNT          147 a           78 c           74 g          117 t
ORIGIN      
        1 attcctacat ttcttttgtt tgtgatgtat caatccagtg tgaaaggaaa cataaaacca
       61 gcacatatat aaaccaaatg tgcaacagca aaagctttaa caaaccctaa ttattcaggt
      121 ggttaaggaa caagctaaat agcagcacta gtacactgta aattcttgca gctgacagag
      181 aagtggttat gacagctttc acattatctc attgcagtat cgaggcagta gtcgcagctg
      241 gctcatatgt caaaatgtgt caggacttaa atggtaaaac aggagtgcaa cagcaattgg
      301 cttttcaatc aataatgcaa tcaatatatt tcacagatat tttcccatat ctaaattact
      361 ctgcagagat gaggtagcct gactgagtgt ttataaatca ataaaacacc cagcta
//
LOCUS       KCKM01000146             738 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2322apa ultra-conserved element locus
            uce-1544, sequence.
ACCESSION   KCKM01000146
VERSION     KCKM01000146.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 738)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 738)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..738
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2322apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>738
                     /note="ultra-conserved element locus uce-1544"
BASE COUNT          245 a          148 c          149 g          196 t
ORIGIN      
        1 ttagagctac tgtaaacaat gtcaaattgg agataagaga tttgaggtca gggtgcttgg
       61 tttgggtttc tttttctttt tatgcatttt tcctgtggct gtacacaaag gggaaaaaaa
      121 aaaatctaat tacagtttta aatgcccaaa atgccatgtc caccaaaagc ccgatgctca
      181 ttagtactag taattaactt tacaactgtc aacacaaaca ccacacaggc tgacagatag
      241 atagtagctc tgagggtgct aataaatccg gaaataacaa cttgacacgc agatgcacaa
      301 aaggatgcag gtgataaaga aatgttgaca tcaaatctaa ttatcttcga aatggccaac
      361 tactgcacaa tccccagtaa tgcactgtta ttgctggtga tgagccccac tggaacggct
      421 cttaaccgcg gcgtacaacg gagcttttac agccccttgt catatctagt gaggacaata
      481 tcaaaaagga aattatgagt gtcatgaccc ctccgagtca aaaaatctcg tgatgaatat
      541 aggctcagca aagcatagca gattaccccc ttacgagttt taaagccagg atgatatatg
      601 acatttttat caggcacttt ctcaggaatg tcaccaagag ggaaaatcaa ggccctgaaa
      661 agagacgact aggtgaatta tgcaactgta attgccgatc ataacctgat atgagctgaa
      721 attgctctgt tttcatat
//
LOCUS       KCKM01000147            1122 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2338apa ultra-conserved element locus
            uce-3276, sequence.
ACCESSION   KCKM01000147
VERSION     KCKM01000147.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1122)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1122)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1122
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2338apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1122
                     /note="ultra-conserved element locus uce-3276"
BASE COUNT          348 a          214 c          222 g          338 t
ORIGIN      
        1 aagcggcttg tgaactgtaa cttgtatatc cctttccttt aataaaactt ttatgtgaaa
       61 tctgttaaag ccagcacagt gtgagttcgg cagcgcatca tcccaagcat tccagccatg
      121 taggagcttg cccttcctct gtctgcccag gctgtcacgg gcgctggtaa atcagcgtgg
      181 gctcctgcct actgtctctg ttcttgtgtc aaaccagtct gagagtgcct ggtaattgat
      241 aatgttgtca ccaatagtaa aggaaaaaca ttgtttcaat ttaaccaatg ccctgttaac
      301 agagcagacc tcactgtgtg acgtgcatat acattatctg gggaaaaaat caattggggg
      361 gaaaatacgt gatctaaaca taatacaaaa ttattgcgtg tttaagcaca ctgcagtaag
      421 aattctattc aaacctgtaa gactgtagca gtaataaatt gttttttgaa cctcatccct
      481 accatgaaga ttgagtgtca ggtacttttt ttcctcctgc aggatttcaa gacttgattg
      541 cccaaatgac agtttactta ttttactgtc acatactttt gtgaaatgcc ataacaagtt
      601 gattacaggt ttcacatttt gcatagtgac aaaatcatct gtcatataat agtctgatgc
      661 ctgaaagcca tttaactaag aagcagtttc tactgaaaat aatgatattt gaaacattaa
      721 ggtgggttta gatgtgtaca ttttctaagt ctttgtttta actgaatgag aagaccagta
      781 ttatcaattt caggcatgaa tttaagtctt gtaaaagcca ccagacaaca actagccaga
      841 ggataaggca aattaggagg ggcatcattt catgaatgaa atgaagggca gaaataaaaa
      901 gcctgacaga aataagaaga tcttggctgc tgcacagaca aaatagtgtt tgtctcctgt
      961 ttggaaaaac cattattccc cccaacttaa actggagatc tgaggccatg tcatgcactt
     1021 actggagagg aaaacatgtt cccttacccc tctgtgcaga tattgggtca ctggaactgg
     1081 tgtgaagata agaataacat ttattttctt tattcagcaa ta
//
LOCUS       KCKM01000148             292 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2353apa ultra-conserved element locus
            uce-4690, sequence.
ACCESSION   KCKM01000148
VERSION     KCKM01000148.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 292)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 292)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2353apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>292
                     /note="ultra-conserved element locus uce-4690"
BASE COUNT           66 a           78 c           87 g           61 t
ORIGIN      
        1 tgatggaaag cgttacttca acatccctgg atctcgcacc gatgacatcg ctgacgtgga
       61 gatgacgaca aatgtgggta tccccgggcg ctgggtgttc agaatcgatg atgcccaggt
      121 gcaagtgggg ggctgcagca atacaagtaa gaggacagca gttaggttta tttcactccc
      181 aacccaaccc cacactgttc tccagcccca tctttccctg cctcaacccc cacctccttg
      241 gtgtggagga gatggcttga agggcttggg gagggagggg aggcagccat gg
//
LOCUS       KCKM01000149             835 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2369apa ultra-conserved element locus
            uce-6729, sequence.
ACCESSION   KCKM01000149
VERSION     KCKM01000149.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 835)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 835)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..835
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2369apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>835
                     /note="ultra-conserved element locus uce-6729"
BASE COUNT          204 a          157 c          161 g          313 t
ORIGIN      
        1 ttttttttta gaataggacc tgcaaagaaa agcttcatgc tgaatctcaa atttaactat
       61 attgatgtga ctgaactact gggttagtta tatacatttg ttttatgttc agctatctgc
      121 tagatttata ctaatgtggt atgtttccct ttctctcttc agcttaataa ccagtttgta
      181 ttttgttttg atttttcagt cccgtctttt accttcacac caacaggtat atatttgcac
      241 ttttcccccc ttctttgtta ctttagcatg tgtttgtggt actgtttctc cttctctgac
      301 ataaccagcc cagctgttct gaacgggttt taaaaccatt gcgttaatga caggtgtaat
      361 tattttgttc tctaagtagc gtgtatttgc tttgtatctg acacgttctt ccatttgtgc
      421 gtaccttttg gtcacgtacc atttgacgca aggatgccat tttgcagtat gatcctgtca
      481 gtttggacag cccaggctct ccacatgaat attttgatgg tgtagtatgg ccttctgcat
      541 ctagcaatgc aaaaggtgct tctggcagag gaggaatgac ttagcagagc ccagatgctg
      601 acttgacatg gattcagtgg gactatagtt ggtgaaacat ttgtttcttt ttctattctc
      661 tgaatctgca ttagttcagt gacctaggaa ttacctgctt tggaagatag agaaaatcaa
      721 acagcagtta gatgtctttg tttgctgcct taaactatat ttgtgcgatg aaattttcaa
      781 ataatcctgt tctacctaaa cagaggtgca tttcaaattc agggtgcgtt taaaa
//
LOCUS       KCKM01000150             689 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2385apa ultra-conserved element locus
            uce-2676, sequence.
ACCESSION   KCKM01000150
VERSION     KCKM01000150.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 689)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 689)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..689
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2385apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>689
                     /note="ultra-conserved element locus uce-2676"
BASE COUNT          245 a          109 c          112 g          223 t
ORIGIN      
        1 ctaagaccaa aaaaacccat aacccgaaag tgattaaaag aaggatttct gtaatttggt
       61 tgggggaatg taacaaacta atttaagcta atgtagtgtt tataaagtta cttagataat
      121 gacaccatgt atgccattat aatcattaaa acccaatcta tggttttttt taaaaaaact
      181 tagatgatta acacagaatc aagttgatgt gaaggaacaa ttacttttag aaaaaaaatc
      241 aggaggtcct aatattctgt agaatgaggg aggatgcagc tgtatgtcga cagctttcat
      301 atcctcattt gaataatgtg gcctgaatct gtcactttat tcatcctcct tatgctcagt
      361 gtactctgca tcaacaacaa attaagttgt aaataagaga caatcatcac ttttgttttt
      421 aagcagcttc tgcatggaga atttcaatgt actgtttctt tttgacagaa agaaagagat
      481 tctacactct gcttatgtaa gcacaaatat gaggaaacca actgaaatga aacaataagg
      541 gagcacttga aaactgctcc aaaatgttct tggaagtaca tttctgccac cacagaaatc
      601 tcctttttta ataggatacg tataatgaaa actgtttaat ttactgtaat aattattttt
      661 actttgctct agaaatccaa tgatttttt
//
LOCUS       KCKM01000151             506 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2401apa ultra-conserved element locus
            uce-4858, sequence.
ACCESSION   KCKM01000151
VERSION     KCKM01000151.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 506)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 506)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2401apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>506
                     /note="ultra-conserved element locus uce-4858"
BASE COUNT          178 a          114 c           95 g          119 t
ORIGIN      
        1 tttgagaagc tgaactgaca gcttattttg caaagggaaa gcaatttagg gaaaggaaaa
       61 aaagcgcgtt agcttgcttt cctcgcaagt caacaaataa aaaaagcccc cgttaacaag
      121 catccaggac aaaaggagtt aatatttaat taaaaccagc tctatccact gtaacaatga
      181 cctggagcca aacaaggcag aagatgtatg agtcattctt tctgccagtg aatgagacag
      241 ctgatctccg aagcaattcc tcaagacaag cagtcagaac tggagttctg cctccattca
      301 caaaaacaca gtccagcatg aaccatgtgg ccccaaccac aagcttttca tgtcacaccc
      361 ttccagaaag ctacagcaaa gtaaacttga actttaggca taaacacact gatttcactg
      421 ctttgtctca agatgcagtg cagacctgct gaggaacctt atttaataaa ggaaaagtta
      481 agctaactct caagggtttc aattta
//
LOCUS       KCKM01000152             682 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2432apa ultra-conserved element locus
            uce-1121, sequence.
ACCESSION   KCKM01000152
VERSION     KCKM01000152.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 682)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 682)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..682
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2432apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>682
                     /note="ultra-conserved element locus uce-1121"
BASE COUNT          222 a          136 c          132 g          192 t
ORIGIN      
        1 agagtttatg cgacgtcttc cctccagcga aggtgaaggc ccagcccgaa gacatctcag
       61 cttctaaatg cgccaacgtt gcgcgtcccc ccttgacttc caattgaaaa agattacaaa
      121 taatgttaaa taatatagtt tataacctcg aggctgtttt caaaggtgta tagaccagtt
      181 gtcaacaggc agagaggtag ggaagggaag ggaaattata ggctgcacaa aagaggaaag
      241 taaaagtgaa agctccataa aagaaagtgg aactattatg gagcaaaatg ccaactcatt
      301 acaaaacagc caaataagag agaaatacag ctttacccgt aatagcagtt tacaagggaa
      361 cattgtattg caacataacg gtggtgctat aatttgctct aacaactcca attatgcctt
      421 ttattgattt ggcaacacat ttaataggag tagccacacc tcttgtgtta caaatcatta
      481 aaggtgttga acagtgtaat tttaaaattg tccttctcct acagatgtca gtgtgacagc
      541 ataatttccc ctgatttctg ctatgtaaac agtgcgttac agtaatttcc cccttacaaa
      601 gcagaaatgt tgtcagcctg agtttttttg tgcagaaaca tccatttaat atttttcccc
      661 cagtctattc tcctaattgc tg
//
LOCUS       KCKM01000153             924 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2448apa ultra-conserved element locus
            uce-6195, sequence.
ACCESSION   KCKM01000153
VERSION     KCKM01000153.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 924)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 924)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..924
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2448apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>924
                     /note="ultra-conserved element locus uce-6195"
BASE COUNT          286 a          150 c          187 g          301 t
ORIGIN      
        1 acagaaatct ctgttagcag aagagtcttt tccagcccat ggattttctc tttgctgtaa
       61 tgcattatgt gcctacgaaa cataaatata taaagcatga cacacacatt ccagctgata
      121 tacaaacaaa tagtttgtat ttttggtatt ttgctgaatt cagcaaaggc ttataggaat
      181 ttctggatcc tcaagcagtt gaataaagtg atttttagaa ggcaaatcaa tccgtcaata
      241 ctacatggtc ctgttttggt ttttcttgga gcatatttaa aattgtatat ttgaggtgtc
      301 aaggttcagg agtcaagtgt tccatgtgat gaattaagca aaggtcaaag gctatgcaat
      361 gcagtttcag aagattgtct acctctgcct ttgcagctca ttcatgctga agtgatgcac
      421 tatgggaatt actaccaaac tctgctctgc aacatctgct ctccctaagt gagttagtgc
      481 acgtcagaca tctttatgtc agaatattgc agtgatggat gcagtcttca gaaaatgctg
      541 cataaaaatc tggtgtgccg ttctggccat taagtgaaat tactatttaa attaatggtg
      601 ctgtcacagt ttatctgtgc aaagaatgaa cgctgattag ggtattaagt aattagcaat
      661 ttatcacact ggaacaaggt tgataataat taaagaagta atggtttacc aaagaaacta
      721 gaaagggagt cacttcttgt tatgtgagtg aaatcttggc tgaaaaattt aattcagtta
      781 aacaaagatg aggttcgcag tggaagaata cagccctgtt tgtttcaata gaaaaacagt
      841 tcattatcaa aattttagtt tgcctgtcaa aagtcccttg gggctgtctg agttgcttat
      901 tagtattgaa ctgagtcatt ttct
//
LOCUS       KCKM01000154             784 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2464apa ultra-conserved element locus
            uce-5627, sequence.
ACCESSION   KCKM01000154
VERSION     KCKM01000154.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 784)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 784)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..784
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2464apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>784
                     /note="ultra-conserved element locus uce-5627"
BASE COUNT          157 a          218 c          255 g          154 t
ORIGIN      
        1 tgacaaatca aagctcattt tccacagttt cacgtgctgc ctcatcatcg tttgtcatgt
       61 agatccctgc gccgttgggc acattcactg ctgggaaacc gggaccagga tgcagttggg
      121 agagcacgga ggtccgggat gcttctgtgc tcatcaccac ctcctccaag cgtggggtcc
      181 ctccgggagg tgttgcagac cccgacaggg agaccacagc tcttctgccc atgtaaaaca
      241 aagctccagc tgtccgaggc gacaggagag ctttgcactt cattcaaacc cctgctttaa
      301 ggagtgggga ggctcaagcc tcgggcaggc gcttgtgcga gcaaggcagg agggggagct
      361 tgggaaacag ggctggggca gccagggaga gccggagagg agaggaggag cgatcggcca
      421 gggaacagaa caaaaccaaa agctcagtaa aagtcctatt ctgatattta aaagtagaca
      481 ggcacctctt acgtttattc gcgcttggta ttcggcgctg cccaccgagt tccgcgcggt
      541 gcaccggtac acgccgccgt ccttgatctg cgggctcgtg acgttcatgt ggctgacggt
      601 ggtgccgtcc gacatggtgt actggttggt gcggtgcccg ctgtcccgcg ggatgggctc
      661 gtcgtccagc gcccaggtga cggtcggcgg cggggccccc ttggcggcac acatcaggga
      721 gaactgctcc ccggggttga ccaccttctc gctgaaggag gagacgatgc ggggggtccc
      781 atct
//
LOCUS       KCKM01000155             504 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2480apa ultra-conserved element locus
            uce-4183, sequence.
ACCESSION   KCKM01000155
VERSION     KCKM01000155.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 504)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 504)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2480apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>504
                     /note="ultra-conserved element locus uce-4183"
BASE COUNT          121 a          127 c          158 g           98 t
ORIGIN      
        1 ggctccagac agcatctccc cccttcccca cccacctgag agaccctggc ccacagacat
       61 ggtgggattt ggagaaaggg gcaaagaaaa gatgatgggg agagagggcg gtgtcacgag
      121 atgcattaaa aagagaattc cttcgccttt aaattgtctc ggtaacggct ggctcgcagg
      181 cagaaatatt tggcagcggc gaaattaaaa gtgataaatt ttctcgccaa gcgttgatcg
      241 ataatagagg tctcatctgt taatcaatac gacagtctgc ctgtttactg tgcatatgtc
      301 gttccctgcc gccctcgccg ccacgtcaag tttgcattca aaacaacccg agtgcgcagg
      361 ggccgcctgc aaggggaccg atgccaaaac cgggcactcg gggcgagatg ctgccgggga
      421 tgctgagcac agcgtggggg ctgacggggt cccctccttt cagggcaggg agaggagcac
      481 ggtgtaaggg ggcgaggggc tggg
//
LOCUS       KCKM01000156             962 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2495apa ultra-conserved element locus
            uce-6765, sequence.
ACCESSION   KCKM01000156
VERSION     KCKM01000156.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 962)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 962)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..962
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2495apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>962
                     /note="ultra-conserved element locus uce-6765"
BASE COUNT          247 a          247 c          235 g          233 t
ORIGIN      
        1 gaattaccct gataatacag cctgaactgt cctgcccctg cccttcctcc ttgccttttg
       61 ccctgcagct agcaaagata atgagtaaca gtgatattaa acagggattt gggttttttt
      121 acctccccca gaaagtggat aacgcgctac agtagataga aaaatccatc cgactttatt
      181 taactgtaac atttattaag agcagtgaaa aggtcagcgc ggagctccca gcgtatgggc
      241 taaactcctt tccccagcct tgaatgccac aagaaagcag atcctttaag atgcaactat
      301 cttaagctcc cctccgatgg ttaaactctt agtaattcta ggttttggag acaaacgtca
      361 aagcagaggg ctcttccctt cattattcaa gtaaaggccc catcaatatt atctgtaata
      421 agaatctgct gttgacatgg ctcaccccgc agttcctgtt ccaggcagta gtccctgtca
      481 ataggattaa agcggaggaa tgcctttgac aagtccaccg gctgctgatt cattgctgcc
      541 atcaggctgc cggctgggaa aggcaccggg cacccttagc tggccctgtt gtggccaacc
      601 aggggcaagc ggccccgaag ctttgatttc tggtgcagga ggaaacctcc ctggagctgc
      661 agaaggaaac agggagaggg aaagtgtgca agtggtttgc atcacttgtg tcctacccat
      721 gttgattttc actgagtaat gggcacatca gctgatggga agttctgagg tgatttgatg
      781 agcgatgctg aaccaagcag cacagggagg ccatccacga tgcacaagat gctcaggagt
      841 gttcctcagc ctctgccacc atcacctctg tgtcagcctg ggagaccacg ttacgcacgg
      901 acatgaaaga ggaattcact gtcctcgcac tggagctgcg ctctcagtgc caggcagccc
      961 at
//
LOCUS       KCKM01000157             776 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2511apa ultra-conserved element locus
            uce-5733, sequence.
ACCESSION   KCKM01000157
VERSION     KCKM01000157.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 776)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 776)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..776
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2511apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>776
                     /note="ultra-conserved element locus uce-5733"
BASE COUNT          224 a          118 c          139 g          295 t
ORIGIN      
        1 ttcctaccgt gtaatctgat aatacttttc atttcgatat catgcaaagc cgggcttatt
       61 ttaagccttt tttattttta aaaagggaga gtgttggtga ataaatatta cattgggttt
      121 gaacatttat gtggttttga tacatttgtt tgatattatt aaacttttca aatgttgata
      181 ttgctgaatg atggaatata taaaaagcat gggataaaat gtaatctact gcattattag
      241 aaaaaattaa agtagaggct atattttaca gtgtcgtctt tcaaatctag ccatgctgta
      301 aactgatgtt tgctgtatgc tcctcctgat ttgaaataga tgaaagagaa tgaaccttta
      361 atcaccatgg ttcacactat gattgagaac tcggcgctaa gaccacaact gtaccagcaa
      421 gtaaggtctt ggatagtgaa tgaaattgct ttatcatctg cgaaaatttt ccttagtgac
      481 agttttggtt gttcctcaga tttattcatg acatcggtgt ttctcttatt tgctttggaa
      541 aaccacaagt catccatgct ttataaaatg ctgcaatatc gttagcatgg cttttgctgc
      601 gtttttgttg ttaagtatta agtgtacact tttgaataac tttctctgtc tagatgattt
      661 aattagttga tgttttatgc aggtgtccag taaattcata aaacctccaa taagcttcca
      721 acatttgtct tagcatgatt ctctgcaatt agtgttcaaa ggtgcttctt tctttt
//
LOCUS       KCKM01000158             611 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2527apa ultra-conserved element locus
            uce-6005, sequence.
ACCESSION   KCKM01000158
VERSION     KCKM01000158.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 611)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 611)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..611
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2527apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>611
                     /note="ultra-conserved element locus uce-6005"
BASE COUNT          209 a          118 c           98 g          186 t
ORIGIN      
        1 aggaagagaa aagatagcac atgaagaagt catatctact tactaaaaca ccactcacaa
       61 actacagctg ggaccattaa ataaattttg catggtctaa ttaacttggt ttgcaatctc
      121 aattactttt cacccaagaa atcacttttg ttcagtttta tgtgtgtctg tttcccaaaa
      181 aaaaaatgat gtaaggcatc ctcagacaag tgaactctaa acttcatttg tctttcagca
      241 ggcttgatgg ctatgcattt aaaaacccat tctatcttat aaactaaaaa ttaaacgtac
      301 tcagctgtga tggtcgtcat tgcatctgct atttatatgc taataccctc actggaagat
      361 cttgcaaatt attccaccat gccaatatct catgtgcatc tactcaaagc caactaaata
      421 tttttctaga ggcagaagat tttggttagg gaaccagaat atttattgct gtagaatcta
      481 gttaaagggg caaccttaag caaatacacg gccgctacac aaaacaggct tcagtcacct
      541 taaatgaatt ttaaggatat tctgtgtaat caaacagaga ctgggtaaaa ataatttctt
      601 cagtgtcagt a
//
LOCUS       KCKM01000159            1042 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2543apa ultra-conserved element locus
            uce-385, sequence.
ACCESSION   KCKM01000159
VERSION     KCKM01000159.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1042)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1042)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1042
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2543apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1042
                     /note="ultra-conserved element locus uce-385"
BASE COUNT          265 a          211 c          260 g          306 t
ORIGIN      
        1 ctagtctttc agaagcgagt ctacagtctt ggagcctggt tttgctgcag tattgttgga
       61 ttttagtact gttgattttg cagactaatg gcttggctgg aatctgctca tgcttctgac
      121 tgcggtgtgc tttgtttgca caatcatacg agggctgttt caaacaatgg aatagccatt
      181 aagggcaggc aacagattgt tttgaacttg gctaaactag aaaaaaaaaa aaaaaattag
      241 atggccacag agatcttctc acacactgat acttgcagct tctggtgcat ctaacatctg
      301 ttaacattat gctttttttc cctctgccac ctttaacttt cttagatcct agctaccgtt
      361 ctttccactc tggcggatac ggtcaggatg ccttgggtat ggaccctatg atggaacatg
      421 aaatgggtgg ccaccaccct ggtgctgact acccagttga tggtctgcca gatcttggcc
      481 atgcccagga ccttatggat gggctgcctc caggtgacag taatcagttg gcctggttcg
      541 atactgacct gtaaatcatc ctttaggtaa gaagctccaa ccttgaattt aaaaattgaa
      601 acaaaaagag gaaagaaagc acaaaaccca gatgactgga ctgaggactt ggttggcagg
      661 gagggattgg ctcagttggg tcccagtgtg ccagaaatag tgaataaacg ctctggaaac
      721 actccaaact gacttctgcc gtgacgtgtg ggagtaatta actgtaacgt cttgtgcact
      781 ggcttcacgc agtcttaatg tgtgagaatg gtggttcctg cgggaatgct gacttcttgt
      841 ttttctctgc agctgtatca tctgactgaa cttgcattga ttggcctgta gagttgctga
      901 gagggctcga ggggtgggct agtatctcag aaagtgcctg acacactaac caagctgagt
      961 ttcctatggg aacaattgaa gtaaactttt tgttctggtc ctttttggtc gaggagtaat
     1021 aatacaaatg gattttggga gt
//
LOCUS       KCKM01000160             744 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2558apa ultra-conserved element locus
            uce-985, sequence.
ACCESSION   KCKM01000160
VERSION     KCKM01000160.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 744)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 744)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..744
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2558apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>744
                     /note="ultra-conserved element locus uce-985"
BASE COUNT          238 a          135 c          162 g          209 t
ORIGIN      
        1 attccagtga gacagctgaa cctcagcata agtcttagtc tggagaagct ataacagaag
       61 cactgggaca agagaaaata taaaaatctc ccattgtaac agttcttagg ttaggggata
      121 aacacagtat tgagccttaa cagaggagag taatatagca gtttttaaga ggctatgtat
      181 aaatggtaga ggatgaatct gatggttgaa gtctaaataa tactacgtat ctcacaactt
      241 gttgaaaagc acttttttca ttgggggaga ttcacagctg ctgaattttc tgcagttaat
      301 agagtccttt gattcacagc agtgcccctt gctcaaaaaa tactggcctt tgtgtattac
      361 cagaaactaa ttttctattt ggctgaaaag ggaaaaatgg ggttattgct tctccctcct
      421 acagagcttt tcattatgcc tgatgcactc aacttctaag ctcttctgag aaaaaaaaat
      481 aactgaagag gcaagaggta gaaaaatgag cttgttagca cattagaagc gaagtatctt
      541 ggtgggccct agaaattccc agtggtgtgt taacttatca ctctatgcat gctggcactg
      601 atagtctccc aattgatcac tctcttttcg caccaaaggt gctgccagga agcgaaggct
      661 gaaggcccac aggagaacag tctgctatca aaacaagctg tttttaaaag tctgcttgaa
      721 tgggtaaaat gtttcatgaa aaag
//
LOCUS       KCKM01000161             872 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2571apa ultra-conserved element locus
            uce-1644, sequence.
ACCESSION   KCKM01000161
VERSION     KCKM01000161.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 872)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 872)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..872
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2571apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>872
                     /note="ultra-conserved element locus uce-1644"
BASE COUNT          279 a          168 c          179 g          246 t
ORIGIN      
        1 aaaggacagg taaaaacatg ggtttcgtgt tgcttctctc gaaggatagc acaagcgcgg
       61 cgctggaaca agccatctcc acccgaagcg ctgtgcctgc agggttacaa atgcgctttc
      121 tgtaaattca cacaaaaagc tctgggaacc tatttgaaac tgtaaacttg ctttgttcag
      181 gaagagtgag tcttcaggag gataccttgt ccgtctgcag ccccaaccat atttcagagc
      241 acactacttt tggggagtga ataaagttac ctgcaatttt ttactccaat tagaagattt
      301 tttggcattt attacttttt aacttgtttt gcatactgct atctgtttag ctgggtcacg
      361 gagaaagcca tattttctat ttaaaatgat ttgtgtatat cgcttgacca cctcaatggt
      421 ttagtgaaag aaaaaggcag cgattaaaca gtttcaaatg aggtgtcctg ctgattttat
      481 caagtctgct gaatgtataa tgaaaaagga gaagctgaca gtgacactgt tgagaaaata
      541 cagactccct tatctgaacc atttaaggag gtccaattat agatcaaatt taaagggtag
      601 aaacagcaga tttacagaca caaatcaatg aacatggtaa tcccaatgaa tatgacagat
      661 acccctgtta cggaatattg ctgtggttga ggatcattac ctttacagca ccaaatacat
      721 cacagctaaa agcaggacac tctcagtgcg tacttgtagc acaggcaatg actattcatt
      781 tacaccttgg agaaatacct gactccattt tttaaatgct gaaactggga ataaagaaga
      841 ttttcagaca agtagcagca gaaatgaact gc
//
LOCUS       KCKM01000162             874 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2587apa ultra-conserved element locus
            uce-8005, sequence.
ACCESSION   KCKM01000162
VERSION     KCKM01000162.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 874)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 874)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..874
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2587apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>874
                     /note="ultra-conserved element locus uce-8005"
BASE COUNT          282 a          176 c          163 g          253 t
ORIGIN      
        1 ttattacaga gcagtgggag gccttgtaca ctacgcacca gctctatggg gacctccata
       61 tttaaaacaa gatgaaaaaa atgtgatttg aaaaacccct catgggcagc cttcaaaggc
      121 acagacaggt tctgactgga ttaacattta ttgactgttt aagcctgctt ttttgcttca
      181 ggacagagat acacgagttt aattgcggag gctgttctgc caactgatca ccagagtggc
      241 aaccaaagct ttactaatcg gtccttcatt aaagaaaagt ctctattaca aaacaaatta
      301 agcatgctct gatcataacc tacaggtcca atggaattac agcaaagttt aagctgttag
      361 agcactgaaa aacttattaa ggtttagcgc tgagatagca cttttgtatt gattttacaa
      421 tacacaggta ttatgattta tggagtgcta gtgtcactct aacaagctga aggacacaca
      481 atatcatctc caacatcatt aaaattcaga agcctctaga actaactcat caaccactgt
      541 acattgtcac agactataga gctgtattcc agttggaaaa tgccctaagc tttccggaca
      601 gttgtcttcc tgaaacgttt aattaaaaaa ggtgaaaaga gagaactcga cctccgtgca
      661 cgttaaaaaa attcaaatgt ccagttgatg tgatagaatg gcactcttac tcactatcac
      721 ctacaccgaa atgaggtttt tctaccttct ctttcctgag taccaaagca cttgtgagta
      781 ttatggttaa tcgaaaccga aagaggaaga tgaaagccat gcattatttt tccttattct
      841 gtacccggaa tgttttatat tcttgaagtt tgag
//
LOCUS       KCKM01000163             888 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2601apa ultra-conserved element locus
            uce-6480, sequence.
ACCESSION   KCKM01000163
VERSION     KCKM01000163.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 888)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 888)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..888
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2601apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>888
                     /note="ultra-conserved element locus uce-6480"
BASE COUNT          255 a          169 c          164 g          300 t
ORIGIN      
        1 acaatttctg attacatttg caagttgtgt ttacatacat gtagtgtagt caggtatgca
       61 atcatccttt ccattatgta gttttaaatc actcccctaa agtcagagat gacaaactga
      121 aacccataaa aattgcattg tgctggtaat aaatacagta acatctgggc ttctatggtt
      181 ttattttcct taactgtgct gggtcttgtt ataaaacaga agttgcgatg gtaattactt
      241 aaccatctct tcttttggat gaagatcaag taaatccatt atctccatct ttggtactat
      301 tcactatgag cttttactgg cacacctttg gacttagaag aggtagagta gtaaagggat
      361 ttattcatta gagaagtcat tcctgtttta agtaagtaaa ttaattttaa gctttgcatt
      421 tgaaaattta aaaaacatta aatggtaaat gtatatgtcc agctgtggat gcctcttatc
      481 tgatcagaaa atcatctcct tcgcagtttc ggtgtcagaa ctgctcatct tcgcaagtct
      541 gctcacagga tggcactttg tatcaggtaa gaggcactca cgactgtaca tactacagtc
      601 attaaggtcc agtcagcact tcaattgtag tccaaattct ggagttttat aattcctcac
      661 taaaaagtgc taaaattcag ggcctgagca ttttcattca ttcagagaaa gcttgattga
      721 acagataaat agaatccgtt caaaaggtct gggggtttct tttactctac attaggccat
      781 ttatcttctt tctagagagg tacgattcag taggctggta gccgcatcag tctggaagga
      841 tttatctgcc tcttcctatc tcatcctcct ctgcccatct atgggcag
//
LOCUS       KCKM01000164             983 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2616apa ultra-conserved element locus
            uce-5327, sequence.
ACCESSION   KCKM01000164
VERSION     KCKM01000164.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 983)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 983)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..983
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2616apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>983
                     /note="ultra-conserved element locus uce-5327"
BASE COUNT          332 a          220 c          159 g          272 t
ORIGIN      
        1 actcaagctc caagatcagc acaggctgct aggctcagca aattatagtc tggcctttca
       61 cctctgccca ctctggtcag gtagcaaatg agatctaaac tgaaggcatc tgtaggtctc
      121 cgtgtgctct ccagggactg aaaaatcata taacaaaatc attacacatt atatcactcc
      181 attttgcatg aacattagtc tctgctcata agaggaccct ggactcagct aatataaata
      241 atgaactgcc tcttattttc tgaaggcatt tagaggggag ggcagaaaca cattctcttg
      301 caacagtcaa ggcaaccgct tgtagtacag tacaaacagt gccacaatga atgctacttc
      361 ttgtacttct gatgagttag tcagtgttcg gccccttaac aagacaatca caaataccca
      421 ccccaaatcc cagactctac tgtagttaca gtaatactgg caaaaaaaat cacttttgtt
      481 ccaactctaa aattgctgtc aaggctccag agactataaa caacatcttt cactgttctg
      541 acccccatgc aattttaaat cccccaacct ttctgagcac tgttggtgag cagccccatt
      601 acatcttaat gactgtcatt aatttctaaa gagtgttaat ttcagatttt taatcacccc
      661 ttaactattc aattaaattt caataaaatg ttaagtactt acaagtcttc tcatttttcc
      721 taaaatactt actacattaa catgactgaa gtccagtggt aaaaatgaag gaaattaaat
      781 gatatagcac taccaaaaca gctgccaaca aaagaaaaat gctaagaagc gtgaacttaa
      841 gcatataaac ccttgcgata cgattagcat atcttaaggc tttggagggt aggggagcag
      901 accctagtta aatcatatta ttatactgag aggaaatgga caacaataac ttattctgaa
      961 aaaaaaccca tgtacctcat agc
//
LOCUS       KCKM01000165             899 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2632apa ultra-conserved element locus
            uce-343, sequence.
ACCESSION   KCKM01000165
VERSION     KCKM01000165.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 899)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 899)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..899
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2632apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>899
                     /note="ultra-conserved element locus uce-343"
BASE COUNT          305 a          169 c          174 g          251 t
ORIGIN      
        1 tacaatcaga attaaaaaat ttgctctgtt cagggtgagc tgatgaacag ggattttaaa
       61 tttttctttt taatgtgaaa aatgaaagaa aaatgttcct ctagatgtat tatgcctttg
      121 ggctccattt gagggaaggg aaaaaagaca gaaaaagcta ctgtgaaggt cacagagtga
      181 aagaacttcc tcagggcaca gaataaatta aatcccaagg aaaaaataaa atgtgatttc
      241 cagagtgtga ggcacaaact caaaatgaca atgattgaca gccaaactat atccgtgcaa
      301 tatcgaagac tgcacgttct catttacctc agtgtagcca gcaagcgccc attaaacatc
      361 cgtctgatgc ccaaattaac cttcttggca aactgaaaga ggcacaaact atcataatca
      421 acctttcatt atcacagcag cctctagtta aagggtcaga ataattgtgc catcagagcc
      481 ctgattgttt tcaatcaaca gacgactgga gtgacagctc agtgatggag tagtttgatg
      541 aaaccgcacc aggcctaatc agagcagatg aaaggaaggc atgattggtg caaatgaaca
      601 gtcgtgcctc tctttttcat ttacaatctg aaattactct taaatttaca gggttttttc
      661 tctcttatga gtacctctga aagaatgttt gacttattat gagttctgac agtgcagagt
      721 tataaaacac aggtagggtt ttcagcccag gctttaagtg ggtattcagc ataattttaa
      781 caaattcact cttgaaaagc acaaaatgac taaagacttc caatgaccta acctttcagt
      841 gctgtttgat tagcagaaca atttatcacc gctcacattc ttcatgataa gagaagatt
//
LOCUS       KCKM01000166             773 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2647apa ultra-conserved element locus
            uce-6657, sequence.
ACCESSION   KCKM01000166
VERSION     KCKM01000166.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 773)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 773)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..773
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2647apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>773
                     /note="ultra-conserved element locus uce-6657"
BASE COUNT          278 a          112 c          124 g          259 t
ORIGIN      
        1 aaagtatcat atcacaacaa taatacgatt tcgtagcccg acaataatat aattattctt
       61 catttcaatc cttaagagct actagttaaa taataaatag agttccgatt gatctattgt
      121 taaaatggct agtaaatggc ctttttattc caattaacaa atcatctgct aaatctatga
      181 atcttaatat tcagatctat tcacttcaat tcatacaatt tatctgcaaa tagttgttgg
      241 gcttttgatt ctaaatataa ttagctgata attttgcttg gctgaattac ttttctggag
      301 ggcctgctaa ggctctcagt cgcattatct agcaataatg aatctgatag gtgaaatttt
      361 ttactgtaat gaggatgaga cacagttgtg acacctgagt ctagtaataa cagaagactg
      421 ctaattatcg acagcacttt tttgtgtgat gcacaggaaa aaaaaaatcc ctcattatta
      481 aaaaataaaa agttacaatt ataagtgaca ccggaggaga gtaaataaaa tggagtgatt
      541 aaaacattgc tgctttaagg gtgtttttaa ttaagtggaa atgctaatgt tgtcatactt
      601 agcagatggg attaaaatta gttattgtaa gtaactcata ttttatgtta tggtttccac
      661 agcatgtcta caagatctaa gaaagtgata cattccataa gacatttaaa aaatgaaatt
      721 ctcatagtct ttacagctca taataatgaa catcatgaat aaactatcgg gaa
//
LOCUS       KCKM01000167             894 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2663apa ultra-conserved element locus
            uce-5489, sequence.
ACCESSION   KCKM01000167
VERSION     KCKM01000167.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 894)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 894)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..894
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2663apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>894
                     /note="ultra-conserved element locus uce-5489"
BASE COUNT          276 a          216 c          144 g          258 t
ORIGIN      
        1 acgtgaaaga gctgcattta tattaagtgc agagtaagca aataatcttg aaatgttcat
       61 aaacacatta gcacacaagc tgcaaagctg tacctagagt tcttgaaaag ctgtttttaa
      121 attcttgaca ggatttcctt ctgaaaataa aatactacaa agcccttttt gaagatccca
      181 gtgacataca ctgctctaga ctgaagagtg aggtaccttg caacacctag aaccaccatg
      241 gcttcgccac actttctacc cgtggcagag accagcctcc tttccatcat acttttcctg
      301 taggagacat ttcatggttc tctttaccct tcctgtcaat ggttgctctc ttccatcaat
      361 tccatttaga attatactat agatcaatgc ggttcaagac cggcgcggct cctctgaatg
      421 gttgactgca catatattca tttaatagag ctcacactat gacatgtatt ggccagctgc
      481 atttcctctc cacttcagca gttaattcca tcaataactt atctccgagc ctgtttccct
      541 tttatccaga caaaggggcg gctttctgcc aagtcagctt tcaataatga tcacaacagc
      601 aaaactgaaa caatacaaac ctctgctcca cctcaaatcc agcagcagat ttcactaagt
      661 ttaattacac tacgagatac attttaagcc tggcttaact aagctatgaa attgggagat
      721 gaatcatatc gttagaacaa tgtataaaaa caattcttca ccctcaccag gcccttggac
      781 ctgtgaaaaa ctaaatattt tccagaaaga cacaccgact tcatctttta aaggtgtctg
      841 agcaagcaga actctaagaa tcaaagtctt cagtgtaact gctcctttct gaaa
//
LOCUS       KCKM01000168             311 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2679apa ultra-conserved element locus
            uce-6154, sequence.
ACCESSION   KCKM01000168
VERSION     KCKM01000168.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 311)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 311)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2679apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>311
                     /note="ultra-conserved element locus uce-6154"
BASE COUNT          101 a           67 c           61 g           82 t
ORIGIN      
        1 ggcggcagag cggtgtcaga gagtgtaaat cacggcatct ctagcaggga gcatgcaagc
       61 accactgaca ttttcacaat ttaaatcatc ttgagtaata acccttttaa gatgactaat
      121 gttactgatt ttcctgcatt aataatagtg ccaaagagaa cacagaaggg gaaaatcact
      181 agtgcacgag gtcacatttt caaactaaac gtgtgggtat gtttaactct ttacataaaa
      241 gccgctcgaa cgtgaacatt tacacacctg gaagagcaca atttaaaact cgtttcttcc
      301 cctgccaatt c
//
LOCUS       KCKM01000169            1212 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2694apa ultra-conserved element locus
            uce-1004, sequence.
ACCESSION   KCKM01000169
VERSION     KCKM01000169.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1212)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1212)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1212
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2694apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1212
                     /note="ultra-conserved element locus uce-1004"
BASE COUNT          359 a          206 c          207 g          440 t
ORIGIN      
        1 taagtacagt ggattaaact agagagttac ttcagaagca gtaatcaaca cttgtgcatt
       61 gtacaagaca tcctttgttg tcacctcatt gaaataatac cacagaaggc aaatgctttc
      121 ttctctcttg cttgctttct tgccaaaaga cagttctact tgtcacaact ttatctatag
      181 actttcgaaa ttaccatgca tatggcctct agttaatagc aagcgaaatt gcgatagtat
      241 taataacatt aaaactatgt ttagtttatt gtttctctgt tgaaatactg ttaatttttt
      301 taatgggatt gctaaaaaca ttgttaataa ttggagaaat tagctttggt ggaacatgca
      361 cgattgtttg atcaatatgg gttttttgat actcctggca atgcttttgt tagttccaat
      421 tttgcaactt tgaagatccc ttttcaaggg gcatctttct gacgaatgtg cagtttttca
      481 gcatgtacct tctgtcttgt atcacagtgt ttgagaagaa tctatgcttt acttattcac
      541 taggctttca atagagaatc acattaatcc ttttaagctc cttattctaa tgatttattt
      601 tgttgaaaac cgtagtgatc ctcctttgaa ttttaatgat tgctggctat tcaaggattc
      661 attgttttga cttcctgtcc ttacctttgt ttcttacatg tctataggga acacctgtct
      721 aatactgtat ctggccttag ttctcactgg cttaccgtat tcactcaagc ctatcttaag
      781 gcgttaagtt gaaatgctag ctactcatcc atgaaaataa atgtaggata tttacagagg
      841 taggcagata gacagcagag ggatggctga atggattgag tatttttttg ctgaaaataa
      901 tatttttata tgaattatat caagatgatt gttgcaaagt tcgttcaata tgaagtcagc
      961 actttaaaaa ccattaaaca acaacatcta tgggggattt ctatttcaaa atttttccag
     1021 caaatgcagt atgccaacag ttgtcaggat ttggcatcag ccgctgaatt taggtcatgg
     1081 cactggctta aattggattt cagttttcat tttcacccac tctgtataaa tacagaatgt
     1141 ctctttagaa atataactag gaacatcatg agttttcaag aatatattat tctaatacaa
     1201 gattttaaca ac
//
LOCUS       KCKM01000170             804 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2709apa ultra-conserved element locus
            uce-4945, sequence.
ACCESSION   KCKM01000170
VERSION     KCKM01000170.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 804)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 804)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..804
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2709apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>804
                     /note="ultra-conserved element locus uce-4945"
BASE COUNT          218 a          141 c          168 g          277 t
ORIGIN      
        1 tgctgtagcc agtttaaata gtcaatctga acgtgcagtg acttttctgg gccacattag
       61 ggacttgggt ctccacctgt gaaaatctca ttttaatctc tgtaaggtca aattgtttga
      121 ggtttaagtt ttcagagact ttcaggcaat gaaaattgtc atgagagtag atgtgggatg
      181 tgaccattgc tttctcatgg acagtgagca aagcctgggt gcatcacttt ggcctcgccc
      241 tctcccagtg aatatttctg tttagaaata agtttgtctt acatggcata aatgtcctgt
      301 gttagcacaa tgctttttat atttcaaact gatcgtggac agtactatag gggtaaaaaa
      361 ctgaataata tctattttct ttaaacagaa ggccatcatt agccatgtct cacctgacat
      421 cctttatctg ttcagagttc aagcagtttg ccgaaatgaa atgcgtagtg actttagcca
      481 gactatgctc tttcaaggta aaaaaccaca tacatatttt tacattaaat gattctttgt
      541 ttgtgtaata ttttctttgt agagtgtgat atgatgtgga atgatttcag aagatgtttg
      601 gatgcgtata gacaatgcta atttcagatt gtggccagtg actttatcag agtcctgttt
      661 ctactgatgg ggctttgcct acagctttct gctcgccgga ttcatcaggt tttaggaaaa
      721 tttagagctt ttcttggcac tacttttcta aatcaaatta gtcagagact gcttatgtat
      781 cagaggcaca gctatagctg aatg
//
LOCUS       KCKM01000171             352 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2725apa ultra-conserved element locus
            uce-885, sequence.
ACCESSION   KCKM01000171
VERSION     KCKM01000171.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 352)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 352)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2725apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>352
                     /note="ultra-conserved element locus uce-885"
BASE COUNT          102 a           87 c           61 g          102 t
ORIGIN      
        1 ccagaagaac ccttgccggg agaggaatca aagactgccc atgctacctg agcaaccagg
       61 tcaaacatgt cccagtaatg aagatccatc cattaccata acctgcagcc tggcactgta
      121 gatcactttc acggtctcca aagaagctga gcagttatca gtaacattca aaaatccgct
      181 ggaaagtcat tcatttcact ttatggtcct aattagccat ttgtatagtt ctataattaa
      241 atatgttcct ttctcatcaa gtttttcact ttagtaatga taccactgtg ccacaaacag
      301 gccccctgct gtttggtttg ggacttattc atagcattta attggtcacc ca
//
LOCUS       KCKM01000172             855 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2739apa ultra-conserved element locus
            uce-3569, sequence.
ACCESSION   KCKM01000172
VERSION     KCKM01000172.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 855)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 855)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..855
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2739apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>855
                     /note="ultra-conserved element locus uce-3569"
BASE COUNT          279 a          140 c          164 g          272 t
ORIGIN      
        1 ataaagggag atgaggaagg caagaaaagc aatgtggtga attgaatttt ctacatattt
       61 tatcttttaa aaaaatccaa aacccttata ccatatgtct ctgtctttga tgaattactc
      121 ccaatgctgc cttaggaagg ataccagagc agcatattat tctgcatagg tgagttgctt
      181 ctctgcacat tttccttaag attctggagc tcttggatta tgtttgtaaa tcagttagct
      241 tcctagccag agattaaggt aaattctgct aaggactaaa agttgactta gagcattaag
      301 aaggattaat gtttagctgt ggtgaagctg aagtactagg ttagcatgtt tacgcagtgc
      361 tgtagatcac aattaatcca aaattagtat aaaagatcaa cagcaactgc tcttgcatgc
      421 cagcttggct tagttctaaa atcaagactt actttggggg caatctgtgt gcaaagttgc
      481 cgtacatgtg ccctaatagg tttaaagctt tcagaggaat ccatgcattt taagtgttta
      541 tcttctttgc cctctgcttt gagaaaataa atgtagaaat cagtacttct tctgctttct
      601 aactgtgtca cagatagatt ggtgctagca gtgaacaaaa gtgaatacaa tttcctgtct
      661 ttcaaagaaa aggtgcttaa accgtgtatt tttgttcacc atcaaggatt aataacaata
      721 acagggattt tttggcacaa aatattcaca ctgcgtaaca aaaaaaatat taaaagtata
      781 catagatgtc cagatatatt tgtaaaaata ggcacaggca tttgaaaaat atacctgtct
      841 gttctagaac tgtag
//
LOCUS       KCKM01000173             747 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2753apa ultra-conserved element locus
            uce-2895, sequence.
ACCESSION   KCKM01000173
VERSION     KCKM01000173.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 747)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 747)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..747
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2753apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>747
                     /note="ultra-conserved element locus uce-2895"
BASE COUNT          243 a          107 c          142 g          255 t
ORIGIN      
        1 tgtaaaaaaa tgttctttcc atgggaaatc attatttcct cttttgtgaa tcgttttgtt
       61 aaattaggaa agccttaaaa aaagccctca tgtgatgata gtgtgtgaaa aatgtaaaat
      121 atgatttagg tggagatgaa tgactttttc attgttttat tgctaatagc aaatgcattt
      181 caaaattgaa gtaacttgtt agaatccaca tctttacact gctactgaaa ttgtgttttg
      241 atttctttga catgatccct gattgctgtg agaagaatca gttcagtatt tttgttctta
      301 gattccccct cctttgtctt gcagctactt gtggcagatt ccattaacaa ttgcagtagg
      361 aaatacgagc cacatctcat cagaggcaat tatatgggtg tctaacaaat caggtaaaaa
      421 taaactttcc tcccagtgga atctcataaa gaatacttgt gttttcctca actgtttctt
      481 tggaattgat cctacataat tgtgtagttg ctctgcaccc agttttagct acttgaaatg
      541 aattacaaaa ataggagagt tgggaaggga gggaggagga atggaggatg agcaacaagc
      601 aaaactttta attatcacag aagttagaca gtataatgaa aagcttttac atagaaatgt
      661 gtacctaagt gataagtatt atgtatttag ccaaatcatt gatgaatgca attcaattta
      721 ttgattggtg aaagttaaat gtaatat
//
LOCUS       KCKM01000174             474 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2768apa ultra-conserved element locus
            uce-1709, sequence.
ACCESSION   KCKM01000174
VERSION     KCKM01000174.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 474)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 474)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2768apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>474
                     /note="ultra-conserved element locus uce-1709"
BASE COUNT          152 a           82 c           79 g          161 t
ORIGIN      
        1 ttgagaaata caaccgtaac attcaaaaat tagtttatgc ttgtccttat ttatttttct
       61 ttgaatgtcc ttctgagaca agattctcct actatcagct gtgcaaaaca gtatcttgaa
      121 atagagtagt tggagaacct gagtaagagc atcagaatct ggcccattgt atataatgtt
      181 tgataaaact tcaaatcttt ctatacaacc atctcagtag ccagatgttg attgtgtaca
      241 cattgttttg tgttgcttgc ataaacatta taatcacata tagacaacag cagagctaca
      301 atatttagaa aacatttttc acacctcctt attaagcaag actatgaaaa ttatgactca
      361 tcactgcacc attgtttttg cctgttttct tgtgctggtt gaacagtcat agacagctgg
      421 tattaataca ataggtagtg cttagggaat taatgggtga tgtataatac acca
//
LOCUS       KCKM01000175            1083 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2782apa ultra-conserved element locus
            uce-4023, sequence.
ACCESSION   KCKM01000175
VERSION     KCKM01000175.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1083)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1083)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1083
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2782apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1083
                     /note="ultra-conserved element locus uce-4023"
BASE COUNT          328 a          195 c          236 g          324 t
ORIGIN      
        1 caacaatcct gtttcttttg aattaccatt tcagacacca agcaaatact gctctgcagt
       61 ttctagaatt catgttcttg tatctcatca agcaccatga cgctgtggtt tctagtcaat
      121 gattttgttg catgttacca ccaaaaaaaa aaaagaatta agcaaatttg taaaataagt
      181 agttcattgg cataaagtga tttttaaagg tgatgaataa tatttttttc caacaaataa
      241 cagatgttct gtttaaacta tgtttcagta gtatgctaaa ttccaacccc aactgtttgg
      301 gcatattttc ttttctgaaa ctacctttga tatgaaatgc attacaaact catcagttta
      361 gcttcctgtt aacaaagaga cagcagccgt ctggattatt ctagatccgc agtgaaactg
      421 ccacactatg tatgctcaaa ctaaagctgt gcaagtttga caaggggcag atgaatccag
      481 gagttattgt gcaggggttt aagtctatgc ggcagctgac ggttgaaata atcatctata
      541 catcgctctg agctagctgg ggaaaggttg aagctgtgta ttttcaacat atctagccta
      601 atggttaatc tgttgtcttg tacagggggt gctgggtgga atcacagcaa tagctgacag
      661 tttggaggaa tcgctgtggg tattttcagt tgcctgattc acaaagtggt aggtagcgaa
      721 gtctaaacag gcttgtcatt gaaggaggga catcatgctc actgtcactg ctatcaaaag
      781 acctccagta gccaaaagct caatcaacat attgattatt tgcatttagt aatgcagagc
      841 tgcagccacc caccatgtgg aagctgagct ttgtggaaga catgccagat tgcagaacgg
      901 tgattgctcc tttggaggtc atctgggaag atgctgagga gaaagagaac agttaagttg
      961 aggggagaaa taaaatattt ttttcagacc aggatagttt aactgataaa aacactctgt
     1021 gcttctagtg ctgaagctgg catatctgtg cagtgacatg gcattactca ctacagagat
     1081 taa
//
LOCUS       KCKM01000176             785 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2797apa ultra-conserved element locus
            uce-7527, sequence.
ACCESSION   KCKM01000176
VERSION     KCKM01000176.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 785)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 785)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..785
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2797apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>785
                     /note="ultra-conserved element locus uce-7527"
BASE COUNT          250 a          151 c          147 g          237 t
ORIGIN      
        1 gcatctctga aagcttattt ttaaagcgat tttttccatt tttctcactt aagcaaaatt
       61 ctattgccgc aaaataaaaa ttctgttgct gtaaagtaat tgtatgagtg agtgctgctg
      121 tttaagtgaa cagtttacgg ttaccgtatt aaagcgaaca tttcaacttg gctaacataa
      181 ccactgaata aacacatatt gatattatag aacaaaataa tatattagtg cattgctcat
      241 ttgtgctctg atagtcaccc tgatactatt agtcatgcgg ggagtgacaa acacaattac
      301 actcgagtgc taatagagtg gaagggcaaa actgcctgac ctcggcatcc tgggtcgatt
      361 taaatgtttg atgtctcatt ggattagtat cacagtgtga aagacaaagc tcaaactaat
      421 ggaaatgagc ctggacatgc aatactgctg attgggctga cataattaga ataatattct
      481 tcacacagct aataacaagc agaagaaata aataaccgag agataactta atgactgcat
      541 gctaaaatgc ttctttgaat atgctaaggt tagcattttc tatttactta cggagcactg
      601 ggggaatttt tttctccgtg taaccattag ctgtggtgat cagctccaca ctggtcacta
      661 aggccgtatg aaaccatgga ggttgaccta acttttccct cccaacatca ttatttaacc
      721 ctcggggcat tgttacaaat atctgcctct ctagaagacc tgcccaattt cactaaaagc
      781 gagaa
//
LOCUS       KCKM01000177            1097 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2813apa ultra-conserved element locus
            uce-3798, sequence.
ACCESSION   KCKM01000177
VERSION     KCKM01000177.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1097)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1097)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1097
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2813apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1097
                     /note="ultra-conserved element locus uce-3798"
BASE COUNT          335 a          218 c          206 g          338 t
ORIGIN      
        1 agaggaagag cactttaagc ttttatttgt ttaaagattt gagtgaaaac tttttaattt
       61 ttatcagatg aattggtact ctacaaaaag gagatgttgt aactgtgact attatatcac
      121 atcacatcat tgattagact gtatttcaga ataataatat gaattgtagt taacacactg
      181 ggttgtctca gttagataca cattgtgaat atgaatggca tttgccccag gagttaggca
      241 ggacttgaag ccgaacagca gaaaagctaa tttatggcac acagtaggac tgcaacgtct
      301 ggaattctcc atcaagagaa gaatcgttgg aataatttaa cttaaggaaa ctgggcatac
      361 aacacgatcc tggggagcta tgcaattaat gttctgtctg ccacattaaa gatttaccac
      421 tgagatggtc catttgcata caacatacct ctagtgccag gaaaagcttc acttgctttc
      481 accacccagt acggcactag acagcaatag tgagatgctg ttttggttca gttactgctc
      541 agctgtatat caaacatgtt atagaaacag gccttgactt caacatgttt ggtttggatc
      601 agtgaattga gcacttgctg agctctggaa tacaaatgat caacctatct gtctgagcag
      661 tttccccgtt ggtgccatcc tctcgctgcc tcttgctaat gcagtaatat gtatgcagcg
      721 cacagcatcc tatgtgactg ccacttgaca aaatgtgcca gctcatcatt gtctccagac
      781 gagacagatt tattataatt caatatgttc ctcgtgagca cttttttctg tcttatgtta
      841 cagtctgcat agcattcaga ataataacta catgctctta tgacattgca gcactgaatt
      901 cttgcagctg aaaaaatcat ttccttgggt ctgatagaaa ttcacccaca gcaatacctt
      961 tctgctgctg aaaattaata tggggtttcc cctccatccc aaaataagca gttcaggaaa
     1021 taaagctgag tgcttttctt attattatta aataaaattt gttcaatatt caaaaactgc
     1081 aaagccatca gcttgac
//
LOCUS       KCKM01000178             637 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2827apa ultra-conserved element locus
            uce-2348, sequence.
ACCESSION   KCKM01000178
VERSION     KCKM01000178.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 637)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 637)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..637
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2827apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>637
                     /note="ultra-conserved element locus uce-2348"
BASE COUNT          227 a          103 c          110 g          197 t
ORIGIN      
        1 gcgaatgcag cgtgactttg cagaactgaa tgaagtaaaa tattctagtt aagaacatta
       61 agtatatgtg ataggcatga aggcacagag cctggacttc attaaggtag tttttatatt
      121 tttaaaagca atattaaaaa acactggaaa atgcaagata aatgtaacag ttgcttctac
      181 aagttttaac cctgtattgc ttggccattt tgacatataa attattgctt actagctctc
      241 ataaatacac aacacaataa tatgtacaga ggcagacaag catgaaatat gaaaaggaaa
      301 acattggcaa cattgattct ggtaaatcag attatttcat acataccaag tctcataagg
      361 gtggataact actagctgta gtccctgaga agttaggtaa ataccttgat ttggggtttt
      421 cacttttaat gcaagatgac agcattacgg cactcagaga gaacgaaaca ggcaggtgtt
      481 cttaccccag ctcactgact tcatcccagt atttaacagt gtataagatg acaacaaata
      541 ggctatgtaa ataaatatta ctctgctaaa atatttagta tttacatatt tcttcataat
      601 tttacagcag catgtcttat tatttctgat aatatct
//
LOCUS       KCKM01000179             709 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2842apa ultra-conserved element locus
            uce-2688, sequence.
ACCESSION   KCKM01000179
VERSION     KCKM01000179.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 709)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 709)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2842apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>709
                     /note="ultra-conserved element locus uce-2688"
BASE COUNT          230 a          136 c          112 g          231 t
ORIGIN      
        1 tctttaactg gaaagttgtt gtaaaaatta ggatatgtac caaaggaaaa tcagatgttt
       61 gtttatttag tcattggaga catacactct ggtttaaatt acaatgcatt atctcacggg
      121 gtaatattta ctgtatcttt aagaagcctc tatctctctt tctctaattc tttataaaat
      181 gctttgaatg ctctccaaat taattttttc attattaaac aagcatttca gatttgttat
      241 cttacctttc ataatgtctg cgagtacatg tagcagcact tgtgcttcca ggattaccac
      301 ctaattcatc ataaatatgt ttccactgtc gacgggctgt tatctgtaaa aatggcaatg
      361 gaaaatttaa tcttgcatct ttgcagattc tacagcattt gagttcacaa caacaaatgc
      421 atgtatgaca ctttcagaac agtgtgtact acaagcacta taaaagcccc tacagaatat
      481 acagagtgca cagagctttg agtgttgtct tccttaagtt aacactatgt ctatttccct
      541 tttctctaaa atggagtgat ctgactgata atgagtgatc attatcaagc cacaagcaat
      601 acggcctcac aaaagagaat ctcaatcaat atagggtcat taaccatcag aagttatgca
      661 gacaaatccc acggcgaatt atgaaaatga agttcaaacc acactcagc
//
LOCUS       KCKM01000180             864 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2856apa ultra-conserved element locus
            uce-2219, sequence.
ACCESSION   KCKM01000180
VERSION     KCKM01000180.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 864)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 864)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..864
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2856apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>864
                     /note="ultra-conserved element locus uce-2219"
BASE COUNT          233 a          209 c          203 g          219 t
ORIGIN      
        1 ctaaacttta accagaacat gctttgacct aggaaactag ttagcaaaca gacttgctta
       61 accttgtggt tgtgccccct ggccagcgca tccatgtgca ctcggggaca tgtttcagag
      121 ctgccctcct cttcgcttgc atccgtggca ctgtttggaa ataaacaatg tggggataac
      181 tgtttccatt ttgcaatcca gagcgtgacc atcacctcac tgaggaagat ctgccaactg
      241 gtttcctcac catcgttagc accgtcttct gcaatgtttg ctccggtcaa atattccaca
      301 atttttaagc acgtggaatg gattacagaa acccctatgt gcatctccag agagcagcca
      361 gaaagggtta aacaaaatca accctgacaa tactagaaac agttctctca gtgtgtgttg
      421 gttcactgct ccacagggca tagcagatgt tgtgtctggt agtaagaagg gcccaggagg
      481 tgtgagctgt caatcacttt ttttcctaac tacaggctgt gctatggata tgaagcacga
      541 ctaaaacaat ctgtctcagc tggggtgtgt gaggtatcaa taacccttgg cagaggtgtc
      601 aagagccttg ctggaatcaa actaccctgc tgaccagctg cttagcaagt taacaaggcg
      661 gcattcagca ctcgcagccc tcccagccca acaattaaca caactggagc ggggctcggc
      721 tgaaatgtgg gaggaacctc tctgcattgc cctcgcactg gtgacaaaga gatgcgtgga
      781 tctttattca gaagtatcca taccaacatg cgaggagtga gagaaactag ggcagagaat
      841 gtgttttatt ctcgaatcaa atat
//
LOCUS       KCKM01000181             365 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2872apa ultra-conserved element locus
            uce-7584, sequence.
ACCESSION   KCKM01000181
VERSION     KCKM01000181.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 365)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 365)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2872apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>365
                     /note="ultra-conserved element locus uce-7584"
BASE COUNT          117 a           58 c           78 g          112 t
ORIGIN      
        1 aagaaaatga aaaagagcat tagaaaaggc tagtatccaa caaccagcaa cttggagtag
       61 atttacagtt cttcagcctt tgctctagcc ctggagcctg atgggacgct ggtgtccttg
      121 gaggaatggt agaaggaatt gctaggggcc aattgctgat tttatcattc aaacacaaaa
      181 tttgttacac cactttatcg gtcacaggga aagcaattat agtgtggttc aattttccac
      241 tcaatggctg tactggggat caaagtcagt tttttatgat ggagaaaaaa tgttttgcta
      301 ttttgtttgt tatttaaaaa taataataat aaaaagctcg cactggcagt acaatattct
      361 atttg
//
LOCUS       KCKM01000182            1150 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2886apa ultra-conserved element locus
            uce-3446, sequence.
ACCESSION   KCKM01000182
VERSION     KCKM01000182.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1150)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1150)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1150
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2886apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1150
                     /note="ultra-conserved element locus uce-3446"
BASE COUNT          301 a          229 c          218 g          402 t
ORIGIN      
        1 tctgtctttc acatagtcat gaagagaaca tgcacacaga aaaaagtttc agtaagctct
       61 gtaggaatta gtttagctaa tctgtgtgta aggaaaaata tatttgcaat tttgcatttt
      121 tatcctttaa aacagttggt attgacaaat aagtccattt cggtacctaa gatgtaccca
      181 ttccatctag ccatgcaaca cacagaggtt cccccagaat gttgtgaaag tgggaatcag
      241 ataaatgaaa cagtgatggg aaaaatacat ctatttctct cagggttgct cttgtttttc
      301 cctttgttag tcaacctgta cctcccttgt cttttctgtg ctttggatgc tgttgctaag
      361 aactgccata tctaaactga aattcacggt ttgtccactt gtactgctgg gttttttatc
      421 tccatttcac tatgagatta catcagtatt ttgtgttgcc cccccatact tccccagctt
      481 aaagatctgc tcttttagat ttttttgtgt gtgactttaa caatgttctg ttcacatttc
      541 cttggataga cccaacaatt gcttgttgac ccattttaac cccttttgag catcatcttc
      601 aaagtgtaac tgtccttgac aatgaaagag accttcctat tgtctggtcc ttccaggcaa
      661 tctttagcat tgagttaaat ggctttcaga tggaggagtt ggctggaagg aaggagacaa
      721 agtggtctgt tgtttctgag tgactttgct agagtttccc ttttttcttt tagaatggtg
      781 catttctata gaagatgaca gacgttttga caggtgcaat atgctttgaa ctgttgtgtc
      841 agataattct tttgtcttgg tttttcccag cagagtggta cgtctcctta ggatgctgat
      901 atgcatattg tttgcttttc atttagtgtg gtgaagcctt ccatcctcct tttctctctc
      961 cctctctcac ttttttaatg gctctttgca tatatgtagc taacccagat gggaaggcgg
     1021 agtgaccatg acttaaactc tctctctcca atcttttgat ctcgataacc gagagttata
     1081 actcaggaaa tcataatggt aacagaaaaa gagctggcaa agacacacaa aagcattatc
     1141 tcaaataaaa
//
LOCUS       KCKM01000183             679 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2900apa ultra-conserved element locus
            uce-3180, sequence.
ACCESSION   KCKM01000183
VERSION     KCKM01000183.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 679)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 679)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..679
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2900apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>679
                     /note="ultra-conserved element locus uce-3180"
BASE COUNT          192 a          125 c          128 g          234 t
ORIGIN      
        1 tatatatatg tttgttttta agacaaatct ttgtgctaat tttaaatgct attgttagaa
       61 tagaattttt ttgtttcact ggaagacttt aaatgttata ctactgtcaa accttggatt
      121 ttgttgtctg aaagaggtaa ctgctttctt gcgacaaagg cttgaaagat atatctcttt
      181 aatttttatt ttttttccta cttcacgttc acatgtgttg aaactcattg cttctggaaa
      241 tgaagatgct ctggtgtcag ctgtaaaatc tgtatctcac ttcctcagac aagtggatat
      301 ttattgacag ggtgtgagag agaaagagag gagagactgc ctgtcctgga gccagtaacc
      361 ttggtgaaga tgcaatgtca caaacaccaa gccatcattc tcatagatgt acagcatatt
      421 atttaaaggg aaacaaatat cggccactga atgtcacggc aaggacacat cttctgcctc
      481 ttaactaaac ttatcagtgc tgtggtttaa tatggtacct ttttcatcct cccctcaaat
      541 tcatcttaca gagcagctct tgacactacc agagagcagt gaagactaag atttagcgac
      601 gtttgcttca aacagatcta gatttattga tgtttgttgc ctgcttcttc tctcagtaac
      661 agcatgcggg cttaatttt
//
LOCUS       KCKM01000184             431 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2915apa ultra-conserved element locus
            uce-170, sequence.
ACCESSION   KCKM01000184
VERSION     KCKM01000184.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 431)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 431)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2915apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>431
                     /note="ultra-conserved element locus uce-170"
BASE COUNT          138 a           95 c           73 g          125 t
ORIGIN      
        1 tttattacca tcaagttcac aatgctggtg ggctgccttt taatccctct gcagacaaag
       61 gccctaaata aacacagatc ccttcctggg aaaaagtcct ctctggttaa atggtaagga
      121 aatgagtaaa tcattagtaa tctttaaagc caaagctata aactcaagtt accttaagtt
      181 aaaatgaaag tgtcctgcaa gaatttcaaa gttctgtcac agatagaaat ctccagctct
      241 tgactccaga ctaggcgcca gctgataaac aaacaattta agtcaagagc tggagaattc
      301 ccagcttttt catttaatgg ctttggccaa gagtatttat tgcctccagt tttattctca
      361 cttagctcta agaggaaatt taaactcatc attatcttaa agccccatat gggccacagt
      421 cagctcacct g
//
LOCUS       KCKM01000185            1022 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2931apa ultra-conserved element locus
            uce-7468, sequence.
ACCESSION   KCKM01000185
VERSION     KCKM01000185.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1022)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1022)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1022
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2931apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1022
                     /note="ultra-conserved element locus uce-7468"
BASE COUNT          288 a          200 c          194 g          340 t
ORIGIN      
        1 tataatctac cctaaactgg aggttaacat agactaacag aggtaattgg tctctatttt
       61 tcttttctgt gtgtatgctc ctagtaacga atatccgtga ccttccctgg aaatgccaaa
      121 tttatgtgcc cctcagttac gtacgctgaa aggattgaga taacttgtcc tttcttttcc
      181 aggaacagta ccagtttctc tataaggcaa tgctaagctt ggtcagcact aaggaaaatg
      241 gaaacggtcc catgacactg gacaaaaacg gtgctgtgat ggccagtgac gaatctgatc
      301 ccgcagaaag catggagtct cttgtctaat tggaaacctg aaaaggcact taatttgtag
      361 aacttctgaa gactgagtga acttttttga ggcctttttt gccagactct aggttataca
      421 ataacccaat tactttttta cactgataaa agttttgata tttatttttt gccattttat
      481 gtcttaatgg tatcctactg agcatttgca cctctgttta tttcacacag tgaaacgcaa
      541 ttttatctag tttgcactat atgatcagtg ttactgccta taatattcta atacaagaca
      601 agccctgatg tgacattcca tgacaacaaa catacgcttt ttccgttttt gtttaaatgc
      661 agtgaagttt tgctaagtac agtgaccctt gaatcttaaa tcttcaatgc taggccagac
      721 ggattctgtc cacaacagat actgtacccc ttcataccgt atttattatt ttaatgatca
      781 tgtcacagtt ttggtaacgg tattctgcat tccagtggag gggatgagca gtgttcatcc
      841 cttcttgaca aaacgtggca ggtgattgtc agctacagtg aaggcgtaac agcctcgtgg
      901 agctgaaaca attatttctg tgttgtttca gattgctgtt ttgtacactt ccaggcctaa
      961 gacttgcttt agatggaata tataggttac atacattata attataaatt agatgcaact
     1021 ca
//
LOCUS       KCKM01000186            1019 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2962apa ultra-conserved element locus
            uce-1906, sequence.
ACCESSION   KCKM01000186
VERSION     KCKM01000186.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1019)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1019)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1019
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2962apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1019
                     /note="ultra-conserved element locus uce-1906"
BASE COUNT          294 a          177 c          203 g          345 t
ORIGIN      
        1 ctactgtatt aattttacgg agacctgact ctctttgcgg ctgttttttt gcctcacctt
       61 tcgcacaggg caagaccata cgttaaagtc acgtaaatga gctaggtccg tcgaagccta
      121 ttgtgccttt tggggaacca gccccgctgg gttgggtgcc ttccttcccc catttacgct
      181 gttggggtaa gaactacttt cctcacagga gtgtttaaga cttaattttt tatagcatat
      241 aaagtgctca gagatgttcg gatgagggat gttgtgaaaa tgcaaagtag tattatcgtt
      301 gataaattat ttaaaatatt gtggtccatt gagaaaatac tagtttgtag gcagtgaagt
      361 ggttaatacg attgcatctc ttacaggttt caccagatac actcactcac ttacaatgga
      421 taattgttag ctcttgttgt gcagatgctg ttgcagatgg agccctgtac ctgcatgcat
      481 agcaaatgaa ttagactggc aatccccttt ataaagcata aatatgtaat ttgttcagct
      541 gttgtaatta aatatgtatg tgtgaaacag ccaccattca ggtcattaat gatgcgccat
      601 gccaaattag agcttacaga cagtaatgta cattgttgtg caatgaggga attgcaaata
      661 acatagctaa gcctttccta gtaaagtgat ggattcagtg gctttaaaag gaatatttat
      721 atttccagca ttttgattgc ttcagtctat atttacattg atgctcaatg aaaaagatac
      781 aattggatgg attttttttc cgtatttgtt ttatactctt tgaacatgat agaataccca
      841 ttaggtacgt gtcacacaac atttattggg tgtaacattt catacccgtt ggtaatatgc
      901 tgaatatgtt gctatgatca ttcttaaata tatagtcaat taagatctgg taagtacctt
      961 ttcttctgca taatgtagac aaacagagta tcaaagcact tggacaattt taatgcttc
//
LOCUS       KCKM01000187            1414 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2977apa ultra-conserved element locus
            uce-1422, sequence.
ACCESSION   KCKM01000187
VERSION     KCKM01000187.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1414)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1414)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1414
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2977apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1414
                     /note="ultra-conserved element locus uce-1422"
BASE COUNT          462 a          263 c          238 g          451 t
ORIGIN      
        1 ggcaacaaaa atcatttagc atatagataa gtcaatttat catggacttt ctactagaag
       61 aaacactaat tttcttggcc acaaccctga caaatgtttc tgaagagtgt tctttaagtg
      121 tggtcatctc aagtgttgca agtctctgtt ttcttgcttt gtgagcctaa taaacagtct
      181 gtgtcaaaag tgttgtcagt ccattctttg cttgtttggt tcatctagtc tcctgaataa
      241 agcctgcagt ggcagtgtgg tatgacttag atagctaggc tgacattatt gatttctatc
      301 cacagtacac tttgtcaaaa atcaaataga aggccctttg gaccccttca cctttaccaa
      361 acacaccaca aataaacctt tttatatcaa gcaagaaaag tgcaaatctc tgagagcatt
      421 ctattcattt ggaaatgctg cacaaaaacc ttgtacagca cttcaagcgc aaactaaata
      481 acaggcaagg cttaacaagt agtcattaat aatgctgcta agttagttga gaaaaggatg
      541 acacatttta tcatagcacc tatgctgcaa aaataaaaga tattgctata gaaaaaatga
      601 attttaaata ctgccataca aagagtatct gcctcgcgct aatttacttt ttaaaatatt
      661 tatattgtgt tcatctacaa taacttcgtt aaaatgaatg cagcttttaa agaaaatctt
      721 tttgaggaat cttctattta aacattatag caaatactgt actttgctgg tcagatgtat
      781 gcattaagta tgccataaac ccttctactg gccactgact ctactctcct ctctctttct
      841 cctgacacag agaaaatatt atgcagtgac tcgtttctag tgaatccgtg tgattcattg
      901 cccaatttta aactgccaag ctgctaaatt gcatcaggtc tgccaaaatt cattccagga
      961 ctacgaggag atatgaaaaa ttaaatgtca tcttggtaca gtggaaaact tttacctttc
     1021 agagaacaga atatgctaca ttctgtaatg atggatgatt gcccatggct atacttaacc
     1081 tacttagtaa tgtcatgtag tgtaaagcat gtttacctaa aaaaatggca gaagacataa
     1141 actgtatcaa ggtctgacat caatgcattt tcctccaaat aaagtgactt tttatgttga
     1201 ttctctgata taaaataatt ttttctcatc agagtttgtg gacagcacat tacgttgtgt
     1261 ggctaaggag agagagtact tagctattct tgctttacta tctggcacag aaagcttttg
     1321 tgctacctgg ctaagaaatg ctgcaatcta ttctggacac agcttaatca tataaaccta
     1381 tgagaagaaa gaagaaaaat atctgaactg ttaa
//
LOCUS       KCKM01000188             576 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 2993apa ultra-conserved element locus
            uce-2831, sequence.
ACCESSION   KCKM01000188
VERSION     KCKM01000188.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 576)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 576)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2993apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>576
                     /note="ultra-conserved element locus uce-2831"
BASE COUNT          209 a          104 c          104 g          159 t
ORIGIN      
        1 taaaacatct aagcaaaaaa agattaatcg acccccgtca gccagtcatt aaatcaaata
       61 agagcttttc ttgtactttt aaacctcaga tttacagtca gacaaattgt gtaaaaaggc
      121 tggtaataca gtgacgccca gtgccactgg gctttagaaa gctgacagtt gctgtaaaat
      181 agtcattaaa caacctctag aagagactca tcagcagatg cccccaggtg aaggagagag
      241 aaagctgaga gaatgaagga gaatctaaca tcttagcatg actgaattaa acagagcata
      301 ttatgctgat tttcagagtc agcccagtaa tttaattttc atagcagttc ctttgattgt
      361 agcaaccatt ttatgaaaca ttaataaaac ttctttttta tgtagcacac atcccttttc
      421 catttcatta agaaaaaaaa agcaggatgt acaaatttgc tgaccattag ctctgtaaat
      481 gacaaaaaca aatgaaagat tatttttaat gcagtgccac tgtggtgggt agactgtagt
      541 tagcttcaca ataattccag cacaaattgg aagaga
//
LOCUS       KCKM01000189            1050 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3007apa ultra-conserved element locus
            uce-4122, sequence.
ACCESSION   KCKM01000189
VERSION     KCKM01000189.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1050)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1050)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1050
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3007apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1050
                     /note="ultra-conserved element locus uce-4122"
BASE COUNT          291 a          204 c          198 g          357 t
ORIGIN      
        1 agttggccag acacagattt aagcaaataa ttttgaaagt gcaggcttgc ttttgggctt
       61 tttgtattgt tttttttttg caattctgtt agtcaccttt aggaaaagat ctttagtctc
      121 tgttctattt tctgtttgct taaactaaat ttggcatttt ctaccaagag gtattttctt
      181 ttctgttgtt tggtttttaa ttatttcacc accgccccca ccccctttgt aaaccatagt
      241 atttattttt cacagcctta gctgaccaag aagtaaagca gcatgagagg tgtaaagcag
      301 atatgggtgg ggttctctca gactcatttt ctctctgtgc atttctctgc tgtggcacag
      361 actttatgct tattcacaga gagggagttt agaaatgttt ttagaaaatg cagatgtgca
      421 aagcattctt aataaggatg ggaaaagagt ttgcactccc cttttaacca ctctctcacc
      481 tcagcccttt tcagcatgta accttattct ctgtgggatt acttggatga aaaccaatta
      541 gagaactgct cacacaatat aaatgcatac agattagtac agattgaaca gtaccaatgc
      601 caactaatca tacagtatat aaagtcctaa acaatataga tattaaggaa ttatggggaa
      661 atggactcat attgttataa aactgagtac aaaatggaag tagcataaaa ctgtttattt
      721 aagtaataaa taaagtatag gttttctctt tccccctcct tctttttttc ccctttgtgg
      781 caatctgccc gtagacaaac taagtatact gaagaaatgt cagcctacgt gttttcctgg
      841 gtattcccca tgcctttgtg gtactactcc ttcattgttg ttgttttctg tcctttaact
      901 gcccgtcccc tcgataacct cgaatgcaga gcttattctc cagctgggac gagaatgaga
      961 aaatggtctc ctctgaggag gattctgatg ccactacaaa ggtatctggg aggggcaaac
     1021 agaggctgtg aatataactg agttattttc
//
LOCUS       KCKM01000190             965 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3022apa ultra-conserved element locus
            uce-5447, sequence.
ACCESSION   KCKM01000190
VERSION     KCKM01000190.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 965)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 965)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..965
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3022apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>965
                     /note="ultra-conserved element locus uce-5447"
BASE COUNT          335 a          196 c          178 g          256 t
ORIGIN      
        1 atttaataaa tatgtgacga tcttattaca gtccttcagc taggcatgtt aactcatgct
       61 gctagttttg tgatcacagt gcatagaatc caaatataga agaatggggt ggcttttaag
      121 gtaatggtag ataccttgct tataatccaa atatacccaa aactttcgta agctctgtca
      181 tgcatcaatg tggcaggagc taaacctttc cctggtacaa tgtccattgc cggcaatgga
      241 tgcaccaaaa ccgccaagga gctcaagcgt tattgcacaa tatatgaaga cctggaattc
      301 ttccaaaaaa aaagcttaaa ttaaaaaata atggaattat tctgacattt ctggacacct
      361 gcattaatac tgtatgacta ataaaagcat gtcagttgca tggactgaac cagcgatcaa
      421 catgcgccca gaatgcacac tagtaaaaat gcagtcaaag gaagtagtct tcattgccta
      481 taggtcactt ccagtcaaag gttaaagttc aaagactgaa tgatcaaagt gctcattttc
      541 tcagtaggac tatcttctgc tacgagggtc acaaaacggt ggcatcaaca tgtgtcatct
      601 ttaaaataaa agaagagcat ttatggaaaa catgtcagca ttctacgccc aaatcagcaa
      661 ggtgctctac acagaaacaa ttcccagcac agacagtaac tgcagtggaa atacacacat
      721 tgagtaattc tgacgttttg ttcaataatg actcggggaa ggaaaaaaga aacgatatca
      781 aatacaaagt gtccaaaatt cacacacacc ccttagctcc attcaaaatg cagtaatttc
      841 cacactaggt atttagaaag ctactcgtca ggaaaatgaa agatcgttta cacttaacat
      901 tttgcctcct tgaagtacag caggtccacg ctggttatca aactaggaaa tcctttttta
      961 gggaa
//
LOCUS       KCKM01000191             652 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3038apa ultra-conserved element locus
            uce-4458, sequence.
ACCESSION   KCKM01000191
VERSION     KCKM01000191.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 652)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 652)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..652
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3038apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>652
                     /note="ultra-conserved element locus uce-4458"
BASE COUNT          141 a          152 c          194 g          165 t
ORIGIN      
        1 aaagtctaga tcccctgcgg tccacagatc cggcgtcttt gtcttcctgg cagccagggg
       61 ctgggggtac tgggaggatg cccagtggga ggagagggca ggctggcatc aaatgggaag
      121 agggaggact cactggtggg tttgacccgt gcctgtaatt tgtaaagagc atttttacac
      181 cagatcaatg ctttcctcag cattttaatg caccccattg gtgtccttaa actctaatga
      241 tgcagtctgt gagaagctgc catttattac ccacagatgg ggtgataatt attgacaaga
      301 ttgtaactaa taattaaacc catttgctcc tttaaacaag ttggtgtgaa ttatttgcag
      361 ggagttcttt aggaggctcg tggtcactcc cgccgtgtgg tgatgccacc caggagcggg
      421 cccactgtca gggatggaga agggttgctc atgagagctg agcctttcaa acctgtggtg
      481 gagtccttcc tctccagttc agtggggtgc ctgtgcttct ggctgtgtta gtaagaggca
      541 gctgagcaat ccccagggct gcaccttctg agccccagct ccatccaggg caggggctgg
      601 ggactagcgc tgggtctgct cgagggactt tcgtcaagca tggagccaca ga
//
LOCUS       KCKM01000192             960 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3054apa ultra-conserved element locus
            uce-1890, sequence.
ACCESSION   KCKM01000192
VERSION     KCKM01000192.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 960)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 960)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..960
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3054apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>960
                     /note="ultra-conserved element locus uce-1890"
BASE COUNT          309 a          165 c          175 g          311 t
ORIGIN      
        1 gggatctgat ttagaaaaag tatgtgtctg ctcgcaacaa agtcctttca atctgcattt
       61 aaataaaggt attgactatg taaaacacaa ggctgcccaa ggcagagcat aaatagtgtt
      121 tgccaggtat agtgtttgat gtgggcttcc atgtaaggtt ttgaaggcac acgtcggtaa
      181 atcctgaacc tgccaactct ttcctatgca gtgtcactcc agtctagtta gagtgtattt
      241 agaaagtaac taaacacact cttgtggaaa tcattaaata acacagcaat tcatatgttt
      301 gtagcagaca gactctaatg catgttatta actgaaaata aaatctcagc atttatctta
      361 tattttatct tttcagatgt ccagtatgac tgagaatata ataccctaaa gtttaagact
      421 ggtttgtaaa cacaatccct agtgtctgct attgatcttt tgctatttta atgcattttt
      481 actgaccgac atgtcctgtg gtaaagaata ttgcctaaat tagttatctg attggttctt
      541 ttgattaatg atgggactgt gcttcattac acatgacaac atgatcagaa taatcactgc
      601 agccatagaa gttgggactg gcatttttta ttccttcatt tttaaagttc atttataaaa
      661 ttatttaatg tatacgtcct aagttgtaat ttatttacat gacacttttt tcgatgggaa
      721 ctgttgtact gtgtcacaaa tggctaagaa aacaaggtaa actagatgta caaatcaatg
      781 tcttctggct caaggggaaa aaaacataat caagattcaa gagctgacct tgtccaaagt
      841 ccaacttgtc acacaacaaa cagtgaagtg cccaacaaat cactgggatc agcaggatgt
      901 attcaaagga gggtttaaat gatattattc cttgctgaag ttcttaccaa aacttgagga
//
LOCUS       KCKM01000193             651 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3070apa ultra-conserved element locus
            uce-67, sequence.
ACCESSION   KCKM01000193
VERSION     KCKM01000193.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 651)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 651)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3070apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>651
                     /note="ultra-conserved element locus uce-67"
BASE COUNT          190 a          134 c          142 g          185 t
ORIGIN      
        1 tcctaactga tacaggcgct cgcgcactac tgtactttgg ctggattgtc tcctcatgca
       61 tgggtttaat atacacactg tcatcatcag aatgaaactt gtttatgctc ttaatatttt
      121 aaactaccaa gttgttaaaa tatttggtgt ttttttttta atggaactca aacctgtgaa
      181 tctaacattt ttggagaaag ctcaaattgt taaggaatca gcaggacaca tcatcgagct
      241 acaataggtt cactttcatg tggatgctgt agcaggcaag ccttcatgga aaaactctga
      301 atgtgaattt agctagtttt ggataaagac gcctttcagc gtcaataaac accatgaatg
      361 cagccacggt agagttacaa cttaatgaga tgaggggaag tgcacagggt caggcctcat
      421 ctcccagcct ctgtcatgct aatcagctgg gcagcctgca gctgaaaaac tgctggaatt
      481 tttatttgca tttcatttag ttggaaggaa attgacccag atggtccaca aaggcaatag
      541 aaggctggca agcagtctag tgctgcacac ttttccgagg ggctgcactt gtccgcccgt
      601 ccctcttgga gcccaaaaca taaaagatta aaacagcgta agggaattga t
//
LOCUS       KCKM01000194             799 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3085apa ultra-conserved element locus
            uce-412, sequence.
ACCESSION   KCKM01000194
VERSION     KCKM01000194.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 799)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 799)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..799
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3085apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>799
                     /note="ultra-conserved element locus uce-412"
BASE COUNT          223 a          150 c          160 g          266 t
ORIGIN      
        1 tgtttttaat taagttgttt ctgataagca gcatcatgta aggctgctgt tttatttccc
       61 tgtgttggtt attcacttgt gtttataaaa caactttgca gaagctttag tggtgccttt
      121 gtttagtacc aattacaaaa aggatttcat gcaattgaga tgttttcatt taaaaacatg
      181 gagattacac atgcaaattc tttgctgaaa ttggggaaaa gtagtaaggt atccttggtt
      241 aactttttag ttatttaaaa gtagcatgtt ggagattgaa tatttctatg tttcactaga
      301 gcttttaaat ataaaagaga tatgagacta tatctgacac catcaggcat attatattaa
      361 aatttatgaa caacttcatc aaaaaccact ttccttctcc tgcatagaga cagatttgtt
      421 ctgacataaa cgttacatgg ctggttgcag cctcagatta atgcgaagac cctggcgatt
      481 ccttttagac gttattttat gaaataatac ctgtcagctg ctgcctgatc ccagaaaagg
      541 gggcaggttt tccaggtcat cctgccatct gtcagctaaa gctcatctgt ccctccacat
      601 taccacctga tctgtgctaa caggcctcac agggagccct gcttcattgg cccggtggga
      661 gcccggcaaa gagactgtgc gaggacatca cctgtgattc ccagatttaa ttatcactga
      721 agtgatgaag atgtgcaccc agattgaaat gcttttgaat aaatgcatgg ctctggatag
      781 ggttttttct tgccttttt
//
LOCUS       KCKM01000195             834 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3101apa ultra-conserved element locus
            uce-3322, sequence.
ACCESSION   KCKM01000195
VERSION     KCKM01000195.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 834)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 834)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..834
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3101apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>834
                     /note="ultra-conserved element locus uce-3322"
BASE COUNT          229 a          189 c          168 g          248 t
ORIGIN      
        1 ctggttttgc attgcattaa gatcgacttc cttgttctgc acctgcagca ttgtctgcag
       61 ccaccattgc agccctacca caggtatgcg ctatagatgt tgcctgcggt gagagtcttg
      121 gtacaataat agctcttgag aggagactgt agctaaaatt catcatgttt tccaacgtca
      181 ccgtgaaaga gttggccaaa ccagtgcttt gctttctgtc attgtaaggc ttcatctcat
      241 aacaaatttg aaagttacgt atgcctgcct gtatacactg gtgtatattg ttaaaaataa
      301 acagagacct tatgttatgc ccattgtgat tgcgtacaaa agctttgctg tgcgcttggg
      361 tgatcagtga agcttgaatc tccctctatt tactgtatgg tcactgtcag ttcaatgaac
      421 tgcctccttg ttctccacca ttgtcccaca ctcccttaaa catttgtcac tgaagtgcct
      481 ccaaagacaa ataaactgtc accaagaatt caaacctggt aactgggaat aaaaagagag
      541 cagaacctac tggattattt tacatgaaat ggtggagagt tccttctccc cccagaagag
      601 attggctgga caggaccttg gcacggagca gtttcaaata cctagtcaaa tgagagaact
      661 tcctctcctg tggaaaatct ccctctgaca gggaacgtta agtcttttcc ttgcttaaag
      721 ctgtctttgc tacatccctt gacattttaa gaatttccat ttgtctcaaa atcaagcaag
      781 agaaataaca aacttgatgg acactaacat ctgcacaggc tttgttggct ggga
//
LOCUS       KCKM01000196             853 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3117apa ultra-conserved element locus
            uce-522, sequence.
ACCESSION   KCKM01000196
VERSION     KCKM01000196.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 853)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 853)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..853
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3117apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>853
                     /note="ultra-conserved element locus uce-522"
BASE COUNT          261 a          158 c          172 g          262 t
ORIGIN      
        1 gattttgtac agcactaaga agcaaacaac agccgtatta atttttacaa aggctagttg
       61 attggcttcc ttgataacag gtaccagttt agacgaatcg aggccgtgtc tcttcaggtt
      121 ttgccctgtg tccctccaaa gtggcgacca acagagacat taagtgcagc tcctctcttc
      181 ataccttacc cagaggaggg ctgggacttt ggcatggaag tgtggggctt cctttgcact
      241 gtcttaactt atgtgatttt tactctcttt ctgtctctgt ctctttcctg atttggctgc
      301 ttagggacag acaggtaatg gagaagaaat tgaaagggaa aatacaggga aaatgtaaat
      361 gaaaagaagt tattataact gttataatga agtgcctttc atttaaatat aagaatgtaa
      421 cgctgaaatg aacttgtgat cctgaaatgc atttttaatg agtttccttt ttattttgct
      481 gcttcagtgg catattttaa agaccctttg aaaaaagcca cattaaaaac cccaccaaat
      541 gccacaacat gcaaaattgg atattggttt attccaaaac tgctgatcag gaagagtggc
      601 tcttcaacac aaaatgttgc agtcacttta tttaaatgag tttgaatttg cattgtgatg
      661 tgccattctg atttagaaaa aaaaaattag attttcagat caaattgacc cagccagtga
      721 agcattaaga aactggcagg tttagtctga aagcctcatg ttatatcaaa cctgcagccg
      781 gtggaagtca cagagcagca gtgagaaaac aactttctca ctgaaatctt tctcttgtta
      841 ccgcgtaaga ttt
//
LOCUS       KCKM01000197             825 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3133apa ultra-conserved element locus
            uce-3697, sequence.
ACCESSION   KCKM01000197
VERSION     KCKM01000197.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 825)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 825)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..825
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3133apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>825
                     /note="ultra-conserved element locus uce-3697"
BASE COUNT          266 a          151 c          160 g          248 t
ORIGIN      
        1 tgcaatgctg tcacacagct gggcaaagaa gggaaatgtt agttaagctt gttaattatg
       61 gaagttttgc agctcagtgc ttaatattga acaaattgcc agtttgggtt tgcacaatta
      121 ctgcctggat tgataaataa ctctttaatt ggcaaagctt gcgtgagatg aacttttaaa
      181 tcacagcatt ttcacacaat acagtgtgaa atttctttcc tttttttttt tgttaaatga
      241 gtcacaaaga acttgattta agatatattg ctatcttctt tttaagtgga gtcagaatgg
      301 ctgtaccata gcctaatact gccagtattt ggtgccagca ctttgatcca tacacatgaa
      361 ctggatatag acataagagc ttactaaaca aactggacag agtcccagtg ggaacactca
      421 aaaatgtatt aatcaaagtc aagcggcaga gcaaattgaa ccagttcatt aattatgaaa
      481 attctctcac gaagtgacat gttgttaagt gtgtggatac ttaacacatt tgaatctgta
      541 gacttctctc catacatgga aaatttagtt accaatagaa gttttcttct ttctttctcc
      601 ttcttcagat taaaaaagca ctataaatat cacgtgcaca taactccaca cagcatactt
      661 attgcagaaa agcagatttg caaaggtggg tgcatggaag agtcatgagt ccaaggaaaa
      721 aattttatgg tcagcaattt tgggaagcat actctcgaag ggaagagcag acaacctgtc
      781 agctttctct acaagcaggc accagtgatg cagaggcctc ccagc
//
LOCUS       KCKM01000198             581 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3162apa ultra-conserved element locus
            uce-7328, sequence.
ACCESSION   KCKM01000198
VERSION     KCKM01000198.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 581)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 581)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3162apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>581
                     /note="ultra-conserved element locus uce-7328"
BASE COUNT          181 a          101 c          117 g          182 t
ORIGIN      
        1 ccttttactt gggtaactaa tgacagcagc tgaggaggaa ggggggtgtt gggcagaagg
       61 aagttaatta atttcagggg ttttaatctc tcttcttttg taccaaacca taaaacaaaa
      121 attcttcggg agccagaaca tgtacctcca gtaatcgaac gagaggcaag gatctgacta
      181 atagatatta cgttccatta tatggtcttg aagtcaataa acattaggtt accttcatgc
      241 agtgaaaaaa gaccagattt attaaaaaat cttatctgga gggtttgcat ttcaatagga
      301 tgtgaatttg catattttaa caataacctc ccatcattct gtctgatctg tgctcagttg
      361 gccatacaga tcactttatc ttgaatagat tatcaccggt ttaataaacc cttcataata
      421 tgcaggtata acaatggtac ttcattggat aaaggaggta ttaaagttct ttttctggaa
      481 ataggggtgg cccagctagt gattaacttt atacctctgt acatccctgt gctgaataca
      541 cgattgaagg agagtattcc cattattcac gttcaaaatg g
//
LOCUS       KCKM01000199             540 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3178apa ultra-conserved element locus
            uce-5412, sequence.
ACCESSION   KCKM01000199
VERSION     KCKM01000199.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 540)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 540)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3178apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>540
                     /note="ultra-conserved element locus uce-5412"
BASE COUNT          186 a           88 c           87 g          179 t
ORIGIN      
        1 aaaaaaagag aattttaaat atgccctttt ccatacaaga ttcagagttt ctccctgttt
       61 ctgacaggta tgcagataag actgtttatt aaaaaaattg cagcacatgt gctagttgaa
      121 aaatagcagt ttatagcagt gaaaatagag gaatcactac gtacaagtgt atattacacg
      181 ctgaactaca gtgctgtata tagtattaac ttgtactgct ttactcacct cgtacaactg
      241 aatccaaatt aggtcccatt attacattga aggctcatac tcaatagcag ttaagcttct
      301 ttgaatggat tccctattgt ataaaaagta tgccagtctt tgactgccaa aatcaattag
      361 tcacattcat tatgcctcta tttattaatg ctgtacactt tataatgcat ttgctgctga
      421 acaaagaaag ttataaaata tcaaatatgt gttatgattg taattatggc aaaaaaagta
      481 atgatctctt ttagtcgcta actggttaca aagcttctgt aaagattaca ttagtggtga
//
LOCUS       KCKM01000200            1041 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3193apa ultra-conserved element locus
            uce-5200, sequence.
ACCESSION   KCKM01000200
VERSION     KCKM01000200.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1041)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1041)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1041
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3193apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1041
                     /note="ultra-conserved element locus uce-5200"
BASE COUNT          378 a          205 c          159 g          299 t
ORIGIN      
        1 tttaacacat ctctctaaca atactgcaaa tgttgaaaca aaatatcaag gactttagat
       61 ccagatatca aacacaggaa ggaaaaacaa aacttaatgg gtttgtgatt gtgtggtgta
      121 cctaaaaaag agaactacct acaaaagtag aaatacaacc atcttagtca ccagtagcca
      181 tactgctcta gtatttgtaa ttttctaata actgaattag aacactaatg aagtggtctt
      241 ggctattttc cacctgcaat atttcattac atatatgtgt atgtaagtgc atacatttaa
      301 catacattta tacagaacta ataaaaaaat taaatacatt tgcattttta ttatcactcc
      361 tttttaaaaa gttattaaga gtacttagaa aaacatattg ctctatgaat ttctatttac
      421 agtctttgca taaaggtgta aataaaagca actaataagc tacccagaca cccttctgag
      481 caagtggcta aaagccaatc aatattatga gttaatcctc cctggatgct cattcaatta
      541 aaggtgtcag taatgcctca tctgatgtgg cctcaattaa atccagctat ctgatggttg
      601 aaaacacaag gggatacagc aacagcagca aacccagaca aataggcaga cttcgtgtga
      661 ctgctaatta ctacacctgg tgtatattat ggcttgtgcg cttaacgcag cacgtggtag
      721 ctttctgttc agctgtattc atgcatatgt ccacacgcac acatatgaaa accgaaaact
      781 cagtaaataa cccaactaca aataatccaa agttgtgaca ggaaaaacat ccttactgta
      841 tttcagctgc aggaatacca ctgtcaaaac cacttaatac agcgctatta taaaatctgg
      901 tgttaattga cacaaaactg gtcaaagcaa gcggagaact aagagttttt tctgcatgca
      961 cctcagtcca aaaaactcac aggagtcaga aacagttaat ttaccagaat ttaacttctt
     1021 ccattacata ctaaatcttc a
//
LOCUS       KCKM01000201             319 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3208apa ultra-conserved element locus
            uce-6035, sequence.
ACCESSION   KCKM01000201
VERSION     KCKM01000201.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 319)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 319)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3208apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>319
                     /note="ultra-conserved element locus uce-6035"
BASE COUNT           72 a           62 c           82 g          103 t
ORIGIN      
        1 ggtggtgggg aaggggagcg ggaagggcag gccactgcct ggtgccggcc gcggtgtggg
       61 taatcacgcg tccccctctc agggctgatt tgcaagagca gattaatcag agcgcgcggc
      121 ttgatgaaat ttgctgttat tgtgcccatt tttagcaaca tcttttatta tcttcattat
      181 tcatttacag gggaccggca tcaattatgc aaatgagttc acagactttg cagattactt
      241 catttgccgc tattgtttgt ggaaatttaa ttattaaata ttattaagct tgcgttttct
      301 tcaattttcc gaggcttag
//
LOCUS       KCKM01000202             442 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3224apa ultra-conserved element locus
            uce-813, sequence.
ACCESSION   KCKM01000202
VERSION     KCKM01000202.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 442)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 442)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..442
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3224apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>442
                     /note="ultra-conserved element locus uce-813"
BASE COUNT          127 a           81 c           86 g          148 t
ORIGIN      
        1 cacacaaaaa cctacacata acacgagtct gtgtaagttt ctgctggagt ttctcaaagc
       61 caaggcagtc ctttcttgct tttaatgaaa ttcctttcta tttcttcagg tatgactccc
      121 cttggacatg gagggcatat tttctccttg agttaggaca gcttatgaca aataatgatg
      181 aggaatcaat agacaggagg gaaatattgg gtgagaggct gaatgaatct cagagataaa
      241 ttattgacca cgggcatggc cctctctcct ttctcttata tgttcgtatt ccatctcact
      301 aacaacctga aagaaaatca aatattttgt ttgggggctt cactaatatc agcaactttt
      361 actatcttaa tggcattttt attgatctca gctttaatgg gagctgtata tatttgatgt
      421 tggtcattta aagtagatgt ga
//
LOCUS       KCKM01000203             322 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3240apa ultra-conserved element locus
            uce-4479, sequence.
ACCESSION   KCKM01000203
VERSION     KCKM01000203.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 322)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 322)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3240apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>322
                     /note="ultra-conserved element locus uce-4479"
BASE COUNT          108 a           48 c           70 g           96 t
ORIGIN      
        1 ttaggcaaga gctttcctca ctggacaggg tgggagggtg gaaaagtaaa gggcgtcatc
       61 agtggagaga cagatgaact ttcaaagtga aaaaaaatct tgcaaattta attcacagac
      121 tgggaatgga aatgtcattg ccttactcag agggttaatc actttctaat ttaaactggc
      181 aaattttata atgacactgt gaaattagca gcattttatt gtgttaatta tctgcaggac
      241 actacatcat tacttctaat aaatgtaaat gagattgcct ctcctaggac aatatagagg
      301 caaggtgaat ttttattggc ta
//
LOCUS       KCKM01000204             864 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3255apa ultra-conserved element locus
            uce-5314, sequence.
ACCESSION   KCKM01000204
VERSION     KCKM01000204.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 864)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 864)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..864
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3255apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>864
                     /note="ultra-conserved element locus uce-5314"
BASE COUNT          285 a          177 c          127 g          275 t
ORIGIN      
        1 tcatcaacaa aagggaactc tctccataat ttgcttcaga acaatttatc tttagaaaag
       61 ctggaacgtt aataagaagc ggtttttaag ttgcagtact gaaaactgta cctaccttgc
      121 atcacaagta tgacatcgtc actttcaaaa gtttccattt ccataaatct gtacttcaac
      181 ctttgcagta tttacttaca catgcattca cacttcagta gctaatttag ggctccattt
      241 taaacccttc acatatataa ctccattgat gaatcacata aattataaat gcatgcagaa
      301 aaatgctata cagagaacaa taaacaattt gtagcttact ggttttaggt acccttcccc
      361 aaaattgttg aataaatctt gcattttaca ggaccatcaa cactggattt acctggatag
      421 atggcttgtt taagtgaccc agatttgaag ttgtttgtct tggttcatgt cccaagacca
      481 tcatattagc attgatcaat ctgaaggcat caataacaac ctgtaaaaac aagatgtcaa
      541 gtcaattctt tttagaaaat gcaactaatg gtgccaagca acagtggaca aggcacaatc
      601 aactctcatc tcttcctggc ctttatccag aaaatcattt aattataata ttaataaaaa
      661 agagcctcct gctggctatg ctatcggcac actacactac cttgtatcgt aaggtgacac
      721 caattattac cttttccatg gagctttaag ttttatatac acgatatcat cgtataacat
      781 tgcattttta tgtaggctta gtctaagctt caaaggtatg catatgtttg tcacctaaat
      841 cttatcccat caaagtgaat gaca
//
LOCUS       KCKM01000205             809 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3271apa ultra-conserved element locus
            uce-4477, sequence.
ACCESSION   KCKM01000205
VERSION     KCKM01000205.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 809)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 809)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..809
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3271apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>809
                     /note="ultra-conserved element locus uce-4477"
BASE COUNT          214 a          178 c          208 g          209 t
ORIGIN      
        1 gcccacactg gatgtaaact gatgctggaa aagggattag aagcgcattg tctagcgcat
       61 catgtttcgc aaggagcagg cgggctgagt gtgcactgga gtctcagctg agtgggcttc
      121 aggctgttgg actctttcac ctgggagcgt gtggattatt tgaccaaagc atcccaaatc
      181 ccctgacttg gttgcttttt ttcagctttt cggccctgtg ctgactgtgc tctctaaatg
      241 tatccagaga gtgtttccag gagggaggga ttcgagggcg ccaatgaagc ggagatgtgc
      301 ttaatgcaga caccattaat aaatcactga tagttaagat atagattggg tgatgggtgg
      361 cagatgggaa ggaggaatgt caaattgctt ttctcatata gattattgga ttaacaagga
      421 agcagcaggc atgtggcaaa ccggtgtaac aaattactat cataaaaaaa aaatggagct
      481 catcgcaggc tggtaataat gccatgtcgg ccattagctc tctggagagg tacttagagc
      541 acaacatccg tcttctggaa aagagatggc cactggaaca tcagagtgag tgaaggagcc
      601 cctgtttact tctcctttcc cctccccctg cctctgactc cagagctcat gctgttgaag
      661 cagggtggcc aacagcagct gtaatgaata atcgccatag cttttaataa gtgctgctaa
      721 ttactcctcc tctgcctctg accaggtttc tgcacttccc tgcaccagca cagacattat
      781 tggtgtgaga tcagcaggca aacaacaaa
//
LOCUS       KCKM01000206            1118 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3287apa ultra-conserved element locus
            uce-5925, sequence.
ACCESSION   KCKM01000206
VERSION     KCKM01000206.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1118)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1118)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1118
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3287apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1118
                     /note="ultra-conserved element locus uce-5925"
BASE COUNT          319 a          247 c          274 g          278 t
ORIGIN      
        1 gacttggctt ggcctaactg gggctatcac tgtaattgtg gaaggaagtg agaacatacc
       61 agcagggccc cagggagtaa agagcaaagt gaggggaatg gagactgtat ttgtgggacc
      121 ctgggaagct gaagaagtgt cagagagcag ccagtgatgc ctgagggtgg agcagagctg
      181 aggcagttgg atcctcctga aacagcaaat agggaagggt ctgagtttgg agctcagcct
      241 cacagccagc acactctgga tgaatgacca ggtaactagg cacgttctct gtgcgtttaa
      301 aaagagaggg atcattgtaa acagctccag ggatgataaa tatatttatg ctttcagaga
      361 ggagaggggg aactcttccc actgccagtt cttcactgcc ccctgcggtg cgcaggcggc
      421 ctcggttctg ccagtccatt cttccacagc cagtgcatta ttatgaaccc tccagcacac
      481 acagctaatt agggaaaata tcctttctag caatttaaat gattttggca ttttcaggag
      541 ggcacatgta atattcaaat tacttccact ctgcgctgcc ttgtcttgcc tggctcatct
      601 tcccaggtga atttgtagtc tctgaaatgc tctaatttcc cacacaagcc atgtcaaata
      661 taattttggt gcaaagttgg taattatacg taacatcagt ctgatgttaa aaacactgaa
      721 aaatttagca agaagagacg aatggagaga cacaagtctg agaccaacga acgaaaggcg
      781 tgcggccccc ttagtatttg tgctcgttaa ttaataatag catgttttca ggaactgaaa
      841 ggatgtgttt cccgaactga ctggaattca cttatgtccc aattacattg tctcagtgaa
      901 gaacttcggt caggtctcac tgaagagcag cagctaaacc acaagcaaaa tccaggctcc
      961 ccaccgaagt ccatcatagt tgcagggata tgtaaaggag cagaaatctc acccttgggc
     1021 tcaaaaccag ctgtctcctc ctctgccacc cctctggaag tagtcaaaca gatttgcatc
     1081 agtgagtcac caagtgtatg gatatgtatt agtgtgag
//
LOCUS       KCKM01000207             802 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3303apa ultra-conserved element locus
            uce-3290, sequence.
ACCESSION   KCKM01000207
VERSION     KCKM01000207.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 802)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 802)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..802
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3303apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>802
                     /note="ultra-conserved element locus uce-3290"
BASE COUNT          162 a          251 c          230 g          159 t
ORIGIN      
        1 ctccagagtt taagaaccaa gaggaatttt aaatgcattg acccctgacc cggccctgcc
       61 tgcgagggga agccagaccc ccggctgccc ccagccggat gaggccgggg gggctgcagg
      121 ggatggtggg ctctcaaagc ccgcggccat gaagggggat catcctgctt caccccccca
      181 catccctttt cctgcacccg gtgtatctgc ggcctcagca agtaccaaca agggtcactc
      241 caaagccaca gcttggcgat gctgcacctg ccccacacca gggagggttc cgtgggagcg
      301 ggatgcccct gctctgccct ctgcgagggg ttctgggccc ccgaccctgc tcctgcccag
      361 ctccgggcat ccctgctgcc tgcacagacg atgctgcggc gatggtggtg taattaaaaa
      421 cgcaattaag cgctgccact tagcagaaaa gtcatacagt ttggggataa ttatctgaca
      481 atataacaag ttgcccaaca ttaatcaggc tctgatctgc tccagcagct gcgctcctcg
      541 ctccggccgc tcccttgatg gcatccttca ggagacagca ataaatcagg cccttacggg
      601 ggccacggga gcaccacgct gtcccctgcc agctcctagc ctgcatttgg gggtttttgg
      661 ggtgctaaaa tagcactcaa cccactcagc ctcagggtgt ttttctcctg cctgcggatg
      721 ctgagaacca cctgggacca tggagctggt cctggggggt caggacttgc cccagaatgg
      781 gtgggaaggc tgatagggga cc
//
LOCUS       KCKM01000208             871 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3319apa ultra-conserved element locus
            uce-4014, sequence.
ACCESSION   KCKM01000208
VERSION     KCKM01000208.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 871)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 871)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..871
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3319apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>871
                     /note="ultra-conserved element locus uce-4014"
BASE COUNT          256 a          168 c          177 g          270 t
ORIGIN      
        1 tgcagcaaac aagtccaagc ttaagattca agttctcata tgctgtgctg gccattggga
       61 aataaagctt ttactcatag actgaactct tccagtacac gcttgctgaa atctaataaa
      121 gaggagacct cggaaagtaa ctgtagataa cagcattcga gtgagcaggt tgaacctaag
      181 cttgttttct tcagagggtt gtttctctta cagagaggtt ttagctgagt gggaacacac
      241 atccatggat ttgcccagtt ccccagtccc tcccagatcc cggcattgtg agggttaatg
      301 cctaaaactc gccttggctg agatccttcc gctgtttgat ggctcaactg aagcttgatg
      361 tttatggtgg aaattgtctt gatttcttta gatgagatga gcaaccatgg agtttgaaaa
      421 tgtgttttaa ttaagattct gctaaattct accagacacc tacttggaaa acaaagcaac
      481 tgaataatta actctgatga gagcagatgc tgctctaatg acaacctgtt actgctcaag
      541 tgcatcatta gttgttttac tgtgttcttt taatatgtcc agagatcctc agctaatgaa
      601 tatattggta gcaatgcatc taaagcaatt cttcaatgtg tactgtggta agaaatatag
      661 ctaacaacaa caagaaaaaa aaccccaaac aaaacccatg ctcaactgaa atagtgtttc
      721 cgctggtctg tgttgtgtat gcttgaaagc aaactctttt ttagttatcc ttctgggatt
      781 attttagcca tacatcaagt gaagcttaca aattgatgag aatctaatga tgcatttatt
      841 tacagatgtg cggttctgtc gcctgttatg c
//
LOCUS       KCKM01000209            1137 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3335apa ultra-conserved element locus
            uce-4672, sequence.
ACCESSION   KCKM01000209
VERSION     KCKM01000209.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1137)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1137)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1137
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3335apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1137
                     /note="ultra-conserved element locus uce-4672"
BASE COUNT          327 a          203 c          252 g          355 t
ORIGIN      
        1 aagtgtatag atccatcaaa aagttatcat aataattaaa aaagaaaaaa aatgtttaaa
       61 tagggccagt ggcaagaagg gatccggttg cttctctgca tggtgtgttc tgaatgtgca
      121 aactcctgca aatatctgcc attaaccttt cagaattacc gattaagtaa ataggagttt
      181 gtggaagttc aagctttacc cagcattcat ctgcgagctc ttaaaactca ttcatgtaaa
      241 ttttacaaac aaggaatgca acagttttca accttaatga aatataagaa tgtctttttt
      301 gttccatgtg actcacagtt tcgttttgaa gtttttgagc gtctcttaag gttatggggt
      361 ggtcaagcga agcggaacag ggtttttgaa atcaggaagc ctgggcgctg tttcattcag
      421 aaaaaaaaaa aaagagggag tgagagaggg agggaggaaa aaaagcccta ttcctgtgtt
      481 tgattgaaaa ataaaactgc tgctctcagt gaacctttga agtcccccag cccagtaatt
      541 gtttcacgac atttgcagct tgaggcagca agaatgtttg tggttgtttt aaaggcatct
      601 gagtgtggat tccatatggt ttatttttat tttggttttt ttctgatttt ttcttcccca
      661 cttggagcct caagttcttg cgcatggccc gatagcctgt cccagcctac tctgtttctg
      721 caggaactgt ctgtgaaaga actgagtgaa tgcattgtag gccaaagatt caagcgtgct
      781 taattcagac aaaatctgtg aatgcatgtt gaggcaacag ttgattttag ccgtgcttta
      841 tcgatactat gtttggagtg tggcttacta gacagtgtat actttgcttt cctgaacaaa
      901 agacctcttc atatggccta tacttagagc gtgatactcc aaatgcttac tatagagcat
      961 agtgcttgct gtcatgcttt caataggtag tttgcagtag gcctgatagt aagccattgg
     1021 agtcagataa agggcctgat tcaccactgt gttcctccag tcttagagca atgtaactgt
     1081 tttgttcagt ggaacaagct gaatcggatc caaaacctct gaaaatatgt actgtag
//
LOCUS       KCKM01000210            1116 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3351apa ultra-conserved element locus
            uce-2069, sequence.
ACCESSION   KCKM01000210
VERSION     KCKM01000210.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1116)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1116)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1116
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3351apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1116
                     /note="ultra-conserved element locus uce-2069"
BASE COUNT          392 a          231 c          231 g          262 t
ORIGIN      
        1 ttaattcagc ggttctgtct taaaagcacc tgacttcact tctgattaag agttgcaaaa
       61 taaagcatac aaccgaaagc aaaggaaaac atcagaatta gaacttatct gaagtctttc
      121 ctggcatata tctgtcttcc tgacaggtct acagcagtat atctgcgcta gcgtggataa
      181 taggctacac tgcactacaa acaaatgcta taacaaacat gtcaaagcag agttattact
      241 acaggcattt ggattatcag agtaggaaca cacaaaatac acgtaacaac caaaaaattt
      301 agtttcttta gcagcaaagg tgatgtcact atttcgtgaa atgcaagtct acatgagatg
      361 ggtaaatcat gcaaagcaaa gcaacagcag aaaaaaaaaa ttaaagcaag taaaagctct
      421 tactgtgcaa caagctcgcc aaagttttca tcagggcagt attttcgagg acggcctcgt
      481 tgaatatgac ggccacgttt aaactcttca tcatcaacag tccaaaagga cccaaactca
      541 tcctctactc tgataaagca cttatgcagt gagaggttgg tgcgaatggc accctgggac
      601 aagagcagca gcaaaggaga tgaagtggaa acaaagggac acgggatcgg ggacagaaca
      661 gacatcaaat acagggaaaa ggaaaaagaa aataaaatgc aataagcata agcaaatggt
      721 ttgtgagggt taatatgcat tgccacctaa aagctactag catgtgatgc aacaaacacc
      781 aagcaagcag ggtcagggta ctggtgggca tacaaacagt agtgatgaga tgtttgtctt
      841 ggtttccctt aactgaaaca atgcgcaacc acctgcggtt ggtctaacac cagctagcag
      901 ccaaaagcct ctacgttaaa ctgtaagcat gatccaagct aggctaagaa gttcaaacat
      961 ggtggacata cccactgatc ttttgtggcc ttcgtttttg gaactctagt tcatccactg
     1021 tccatactgc ccctttaacg ttttctactc gcacaaaaca cttgtgaaga ctaagattat
     1081 gacgcactgc attctgcagc aagtataaaa gagaaa
//
LOCUS       KCKM01000211             659 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3367apa ultra-conserved element locus
            uce-7615, sequence.
ACCESSION   KCKM01000211
VERSION     KCKM01000211.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 659)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 659)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..659
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3367apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>659
                     /note="ultra-conserved element locus uce-7615"
BASE COUNT          218 a          128 c          114 g          199 t
ORIGIN      
        1 taataataat ttacacacaa ctcacacact tttttggcct ttctgcaagc aatccagaag
       61 cgacaggaac aaattgatgg agacagaaat gggagaatcc caccctgtca gaagatgaat
      121 gagctgagct tgcatgatgt gaaccatggc tgacagaagc gagggggaat caaagagtga
      181 gcaacttttg acaacacacg cttcacagct ctgaccactg aggatctaca tgattatctc
      241 cagacaaaat aactgtgagt aaaaggctta catacactta aattaaacac agcagggttt
      301 tagtaatctc tgtttgcatt ttactttctg ttaagaagga aattgcttgg acttggaaca
      361 tttcatttaa tggcattttt agttaccttt tgtacttcta atgccacagt ccccaaatta
      421 cccaggaagg caaaagaaac ttttgtcctt tatttttaat tgctgtatct tccttaccaa
      481 ttttactaaa ttaaatgtgt tttaaaacat caccgcattt gaaacctaat tatcccaatc
      541 tctggatgaa gaatagctaa caatacaaac cccatttatg taatttattt tgcaaaggaa
      601 aataaatgga atgcagttgc agtaatgata tacatgcttg cgattccacc ctggttttt
//
LOCUS       KCKM01000212             831 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3382apa ultra-conserved element locus
            uce-6250, sequence.
ACCESSION   KCKM01000212
VERSION     KCKM01000212.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 831)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 831)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..831
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3382apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>831
                     /note="ultra-conserved element locus uce-6250"
BASE COUNT          247 a          152 c          137 g          295 t
ORIGIN      
        1 tttatcactt ttcttgaagt agctcaagtt tctgactaaa tattcattta ctctaatatt
       61 tgaagatagg tcaagataag tttaattaaa aagcatctgc tgaacagtgt agagaaatgt
      121 tctgtggggg atctttccga tacttttctt ctccccttga tgtttaaagg agttaccctg
      181 ctgaggttac tttgtcaggt ttctgtcagg ctgactttct cacattttgc agctcattgc
      241 tgcactctct gataatccta ctacactgag tagctgcagt tattaccctt tatatgaagg
      301 atctatgttg aaaggcagtt atgagtttct gtcccagtgg attgcatgat gaagttgaag
      361 caggctgtca tccaaagctg tataatagcc tcagctggga aatacaaaag tgccatggat
      421 tattgataga gtcatatctg cagttctgct gacaaattcc atgcctcttt tactaggttt
      481 ccactattaa gaaatacctc tgttagtatg tctcccctac tctctccctg tgtgttccat
      541 ttggcttagc ttactatttg gcattctacc atatattcca gtgaaaaatg atgttatact
      601 taataacctt aacgttacaa ggagaaaaga tgaacttaac aaaatcctaa tgatcttcat
      661 ttaaaaaaag tactatggaa gtataaattt aacagtccat tttaaaatta tccttttttt
      721 actttttctg tttctttcaa agtacttcat aaaacattaa aatgcatcat ttttccttat
      781 cttaaatatc tatagcacaa aggaaaaggc agaggaatga agattattcc a
//
LOCUS       KCKM01000213             829 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3397apa ultra-conserved element locus
            uce-6905, sequence.
ACCESSION   KCKM01000213
VERSION     KCKM01000213.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 829)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 829)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..829
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3397apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>829
                     /note="ultra-conserved element locus uce-6905"
BASE COUNT          239 a          174 c          188 g          228 t
ORIGIN      
        1 gtgagtgcta acaggcttct ggcaccccag tgctgtgctg ggctgcatct cctacaagcc
       61 tgaactcagg acctcgtgtt aggaaattca ttgctctccg ctttgagcag aacaaacggg
      121 tgaggtaaaa ccactttgcg acgttcaggg agcatcaggt gtgggcacaa atggaaggac
      181 catggcaaat gctcctcgct tgtgcttcaa ggtagccccg ccagcgttgc ctccttcttg
      241 caaaggccat ataatgtttt tcactctctg ctggagcaaa aagctgccct aagaaaagca
      301 gaatgagggc tgatgttttg aaaggtgtcc aagagtaaca aaactcaagt ctccagggct
      361 gagtttcgcc tcttgtgttt ctcaaccagg gtggttgaat gtgttacaga cctatcagaa
      421 attttgctac aaatgcacaa atattaatct acagccattt cctttgcttt cttaaacatg
      481 aatgaggatt tttgtctctt tctccctcca taaattgttc atggtcagag ggggcatgtt
      541 ccgtgtcaaa gtcttgaccg ccaggatcaa acaaaaaacc cttgtgaact caaaagtgga
      601 gacaaataaa tgactattac ttttttttcc cttttgcctg gagttaaacc ttttctctgt
      661 caacaatatt gactttgttc acttggaagg aaacgagaga gagagggaga tttctctaga
      721 tgctgcacag aaaaaaacat tttggaagga ggaatgaaaa aagacagagg ttacaggaaa
      781 tggtagacat tttttgttga attaaaccat taggagtgac ccaaaaacc
//
LOCUS       KCKM01000214             937 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3412apa ultra-conserved element locus
            uce-5323, sequence.
ACCESSION   KCKM01000214
VERSION     KCKM01000214.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 937)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 937)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..937
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3412apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>937
                     /note="ultra-conserved element locus uce-5323"
BASE COUNT          289 a          173 c          189 g          286 t
ORIGIN      
        1 aatattatta ctcagaatgt taactcaagc aaacaagcct tcctgacaag gaaaagatga
       61 aatgtattga aaaaggcact gagatttaaa tccttacaat gaattattgt gagactgaaa
      121 acatctgaga tggtcagaaa atacatggat gtaagcccac aagtctgaag gcagcgcagt
      181 tctaccagag ctttctacag tggtttaaga aaagatttct acctttttat ttttgaatat
      241 gaggcaaacc cttaccctct aacctcattc ctctttccat aaagtgtata cgtaaaattt
      301 tcatttagca tctttagcaa tcttacattt ggtttgaata gtacattttc atttcattca
      361 tcatttaaag acagataatc agaaagtcat tacattggct gacaccaggc cctctgctcg
      421 attgtattgt aattgagcac tgcagagcgt gtgccagatc taatggataa tgaatatatt
      481 atgtcagcag aaccgcctcg gcaaagctcc tggggaatca gagagggcta ctgcagtgac
      541 atgtagggtc acagatgttg tgctgattta ctgatggagt gattgcgtaa ttaggtaatc
      601 aatggtgggt agaggactat atgtggacag cttattttac agaaataaag accatacgag
      661 tacgaggctc atgttccaga ccatgtgaga ctacattttg ggttgtctta attatttgtg
      721 aattcctagc aatactataa agagtctgag agtggaaggc cagcagcagg ggtctgactc
      781 caactcaaac gctacagtga cctattttca caaacttttt acaatattac ccatgtaatt
      841 cagagagctc aagtttgcta ctttggttaa attaaaattt gccttgcttt gtggttcagc
      901 tgtgctcgca ctccagcttt taacatttca tgcagag
//
LOCUS       KCKM01000215             680 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3426apa ultra-conserved element locus
            uce-3316, sequence.
ACCESSION   KCKM01000215
VERSION     KCKM01000215.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 680)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 680)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..680
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3426apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>680
                     /note="ultra-conserved element locus uce-3316"
BASE COUNT          178 a          144 c          155 g          203 t
ORIGIN      
        1 cttaaagcca ccccatcacc cctccggggg ttttctgggg ctggggtccc tgctccacca
       61 ccagttttcc aacagttgga cctccaagct ccgggtaagg ttcgaggcca acgaggaaag
      121 gaaaagcaga gaggatggat ctttgctggg gatttccgta cctgccagtg aaatatcggg
      181 tggtggcacc gaggaatgac tttagcacag agtgtggttt tggtttagca gttatagcgg
      241 catcctgtaa tcatttacag cccttggaat gtatgggtga aataggagag atttatctgt
      301 tcatagttgt gatatgtaga caatgggtgt tcctaatgag gaacatctgc ttttgtgttt
      361 tcccagaaaa cattattcca ctatgaaaat gatactccca tccttttcag caacaccaca
      421 aagaaaatat gggccttttc ctttctttta tttgcttttc tttgggtcaa actaatttcc
      481 cagggacact ttttctgtgg catcttttta ctgactgcac tgcaatttat ggtgggtttg
      541 ttctttaata cgtgagttac tgtgctgtat gaatagcccc gatatgccac cagatactta
      601 aatgtacaca gcaataaaag tgtagacact cagccatgct tcgtgagaaa catcgaggca
      661 acgtaaataa aaattctcag
//
LOCUS       KCKM01000216             906 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3441apa ultra-conserved element locus
            uce-2288, sequence.
ACCESSION   KCKM01000216
VERSION     KCKM01000216.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 906)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 906)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..906
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3441apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>906
                     /note="ultra-conserved element locus uce-2288"
BASE COUNT          125 a          296 c          185 g          300 t
ORIGIN      
        1 ggcagggtga atccgctcag ctccttgctg ggttgcagaa cgctggaact ctgtccgtcc
       61 gtctgtcggc acagccctgc accgtgcaga gagggaacgg agcagtctcg tgggtccttg
      121 ccagcttagt tgtccgtgtc cccgtggtgc gacgcgtggc tctgccgggg agcgggcagg
      181 tcagctcacg cgtgcctttt ccacctcgct gcgtgtacgg cacaggtcag ctcgcctgtg
      241 gttcagtgag gcggtgggaa gctgccggct cccgtgttta gctgccttca ggcctagcta
      301 agccgaggca gtgtctggct ccccagccac aatctctcgt tagaaagaaa ttaaaagcca
      361 ctcaattttg gctaatatcc ctctgtaggc ctttaactcc acctgtgact aacccattca
      421 taatagctct gttttagtgg cttgggttga tgtatcctcg attaatttgg gaggagagcg
      481 gcagggccat atctctttgt ctccccctct cttgctccct gtcctgcagt ctatcttctc
      541 ccactatttc atctctgcta tcatttctct gttcattcat gctcttctac ccccccagcc
      601 acctttttcc ccccctctca ctttgtggca ttttcttccc caactcctgt ttgtcttcct
      661 ttcccctttg ttctccttat gacctttaaa cttcttcctc tgactctttg ctccttctct
      721 ttttctgggc tggcatcgct tccttttcct ttttcaagtt tccttttgct tctcgtccat
      781 tttcttcctc atttggaccc ctttctctga ttatcttccc ctgcacctct cctccccaac
      841 tctccccttg ctgcctcttc ctctttcccc aggtttcaga tgctcacgcg atttttctcc
      901 ctcttt
//
LOCUS       KCKM01000217             326 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3456apa ultra-conserved element locus
            uce-1928, sequence.
ACCESSION   KCKM01000217
VERSION     KCKM01000217.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 326)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 326)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3456apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>326
                     /note="ultra-conserved element locus uce-1928"
BASE COUNT          106 a           58 c           73 g           89 t
ORIGIN      
        1 ttagctgata aatggctgat tcaatagact ggtagcaaac acatgctttg ctagaaacaa
       61 ctttttaagt caccatacat caaacagaca gtgtcagcct ttgaggataa aacagtgata
      121 gcttgttgcg ctctttgaac tgccttggag acccagagac tagaaagtgt ctgaatgttc
      181 tccagaatcc actgggagga ttgaaagctt caaagaggaa cactattgca tccaagggaa
      241 aatgcattga ttgaaggaac cagtgtgaaa tagtctttaa taattaccag aatgctggaa
      301 tcgactggtg ttttgctgag ctatat
//
LOCUS       KCKM01000218             988 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3471apa ultra-conserved element locus
            uce-1202, sequence.
ACCESSION   KCKM01000218
VERSION     KCKM01000218.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 988)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 988)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..988
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3471apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>988
                     /note="ultra-conserved element locus uce-1202"
BASE COUNT          295 a          175 c          169 g          349 t
ORIGIN      
        1 ttccttggtc tcccaggtaa tggtctttat gaatctatat aacatttaat ctgaattttc
       61 tgtacaatgt cctatgtttt atgaagagaa ggggactatt catatcattt tagcagagta
      121 tattctacgt ttatgctttt cttgcaaata aaatttccat gttaactcaa agataagcta
      181 ttttggcttt acttcatagt cagaaggtag atctgtatat tttgttattg atgtaacttc
      241 agagatacat gttaagcctt ttgtttaaag tgcatttaga tttaaacagg ccatattcaa
      301 cgtaaattat ctaaatagat tttggaaaga aaaaggggtc tgttcatttt aatatacctt
      361 cagaaatatt ttacttcttg atgatgacag cagctcttac tgacaactat taatacatta
      421 taaacacccc atcagagtta tataaaaaca tgtcagtttt aaagagaaca tctttgacag
      481 caaattttct gattgtgaaa cagctgtgtc tccagtacaa tgcattaagt agtttattcc
      541 ttttagatag ttaaattgtg catgaaatgt tgctggcgca agggctccaa atctggcctg
      601 attagcgaac atctgttaca ttggaaaaat tcatgtctac cctaattagc tgtcaggctg
      661 atgtacatca gccctgatgg tgagggatcc tgtgctgttt aagtcaaaca ggtttctctc
      721 ctatcccatc acctgccctt tcaaatctct tcctctggtg tgttgctgta attagagatt
      781 gttggaaata caatagagca ggttatggtc agttatagtc ccatctgtgc aattttttta
      841 ttcccacaaa acttacgaac tgacataacg cagccctagc agtcaggcta agaggtctta
      901 tttctaatcc taatctgctt gctaaatctg atgatttttc attctcttaa agcccacact
      961 ttgtgatgat tgaaagaaaa tcagtaat
//
LOCUS       KCKM01000219             735 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3486apa ultra-conserved element locus
            uce-227, sequence.
ACCESSION   KCKM01000219
VERSION     KCKM01000219.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 735)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 735)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..735
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3486apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>735
                     /note="ultra-conserved element locus uce-227"
BASE COUNT          194 a          179 c          164 g          198 t
ORIGIN      
        1 agagagaatc aaactgtagg ttgttttagc acgtggctgc gctgcaggtt ggatgcctaa
       61 ttctgccagg gtaaccaagc aatcacccat accgaaaagg aaatgctggt cccgcgaagt
      121 tagaagctac agttctcccc gcagcaagcc gtgcgttttc tgtgcacgcg tgcgcacaca
      181 cgtgcacgcg tgcgtgcctc gagccggcaa gtcgctgtac agatacttat tctctacacc
      241 acttcccttt tgaaacatta aactgacact ggaactgact gcacaagatt gcattttctc
      301 ttcctaaaca acttgaattg aaaggttact tagtgtaaca atatttactt gcagaattgt
      361 gttgttacca agggtataat ggatggtggc tatgcaggtt tacgcaagaa tgagtgaagc
      421 atgaggcatt agccatgtgt ttgacatgtt tcaaattgct ataatccagc attaaacaca
      481 cccagcaatt catgccattt cttgcagcca taatcttgaa taaagcgtgc acaaccactt
      541 attatataaa ttagtatatg actccctgtt atagtcacaa cagtgctttt gtgtttattt
      601 tgcatcgaga tgtggtcttt tatttgcaca aatagcagga tagagagccg cggctcaatt
      661 agcgctcctc actccacgac agcccgcacc gagcgccggg gtctggcctg cccctgccag
      721 gtacagctgc cgccg
//
LOCUS       KCKM01000220             921 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3502apa ultra-conserved element locus
            uce-251, sequence.
ACCESSION   KCKM01000220
VERSION     KCKM01000220.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 921)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 921)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..921
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3502apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>921
                     /note="ultra-conserved element locus uce-251"
BASE COUNT          241 a          190 c          218 g          272 t
ORIGIN      
        1 ttgctatgcc aacattttct gtgttgtcgg tcggggtcgt ctctgtgtca agactttgta
       61 ttaaaaatcg gtctccagtg cccgtgtctt ttaattcatt gcaagctgta ggccatttgc
      121 tcacaaagcg cttgcagtaa aacaaatgaa tagctaaaat actcatttgc atgattccca
      181 tttgaaaacg attcccctga aattaaggaa gcgtgttact cggttgtgaa gatggatggg
      241 cagatgagcc atgcaattaa tatttttcgg cattctcttt taaagccctc ctaagactaa
      301 aagcaacaca tgctgccttc cagacaaatt gggtcccgca acagttcccg ggctgccatg
      361 gcagcagctt gttcccactc tctccccttt attgtctcac ttacattatg cagtaattaa
      421 aactatttac cattcctact tatctgccat ctgctgccat tgaagtttcc tcttctttat
      481 aaagccgtct taagcagcca caagaaaagt aacggattca aggacaacaa gggggaggga
      541 gaaaattctc ctgcttttta ttaagcggta gcggaccagg acgagggttg ggttttataa
      601 actgggtgct tttgcgtaga gagtcatttt tcacggttta cgtccttggc caccgcaata
      661 cgaagagctt tttctggagc aaactagact catagaaagg gaactagata caagagatga
      721 atatggtgct ataggtgcag cggtgggatc tctatttaca ccagggatgg agggaagaag
      781 ggttgtgttg ggtttcagtc actcctcaac tgatggtggg gaatgaatga aggattttgc
      841 tctgaacggg tgctggcttt gaagcacaga tgatttttag cagattcttg aattggacgt
      901 cgcttatgct ggatgaagcc c
//
LOCUS       KCKM01000221             661 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3517apa ultra-conserved element locus
            uce-7022, sequence.
ACCESSION   KCKM01000221
VERSION     KCKM01000221.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 661)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 661)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..661
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3517apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>661
                     /note="ultra-conserved element locus uce-7022"
BASE COUNT          207 a          120 c          107 g          227 t
ORIGIN      
        1 atctgaacag acccatatca gatgtgatat ttgcaaagca cgacagtgta tttttttact
       61 ccagtacttt tcttgcagcc tttaattgaa aaaggttggg ttattgtttt ccatttaaag
      121 ctttcatcag cttttaaaac tgatagtgcc tatattcaca agggattaag gaagaaaata
      181 agtatacatt ttcacagtct ttaaatcaca taatttgcca ctgaaattaa cgtgtatcat
      241 cttgaattat tatttgatct tatacataag tgctctgcta ttgaaaaaga gtcttaataa
      301 caaatctacc aaaggcagtt caaagccctt ttatcatttt tttttcatta gtatctccca
      361 ttttcatttc attgcttttg ttccttacca ccttcttcat ccagaaaaat aagtaacagc
      421 cagtgtcgct tttgaaatgg aaaaatggtt tcaaatcact ggcaaagctt aatgacttct
      481 gactgctgag atatgttaat ttaagccaga ccaaatgttc ctcagctgca aatatttggt
      541 gttgttcact gggaactggc aagatttatg agggcccagt ggcaaaggct ctctgctcac
      601 atgcctcaca ttacaattgt ttcacatgtt agatgataaa aggctgtttg gaaaaaaaaa
      661 a
//
LOCUS       KCKM01000222            1040 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3531apa ultra-conserved element locus
            uce-6807, sequence.
ACCESSION   KCKM01000222
VERSION     KCKM01000222.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1040)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1040)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1040
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3531apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1040
                     /note="ultra-conserved element locus uce-6807"
BASE COUNT          328 a          207 c          183 g          322 t
ORIGIN      
        1 tggttcatta tgtgcatttg tgacaaacaa tatggaagag acgactgtat agaatgaaat
       61 aacttgcaac agtttacact cctataaaac tatttacatt ttgtcaaatg aatatttata
      121 acaagtggct ttcccttcac aaacactata gctcaagcag ctcccattca ttatcgtatt
      181 taggaagtac aaacactaat tctgcgagtc agccacgcag tctgttgtaa cttgccagaa
      241 aacaaggccc gcaatactaa tggaaaagct cggagaaacg tgctgttgct tccagttttt
      301 caaatgtcct agcattttta tgtcgccaag tcacaggaat tcagtttcaa tattatatct
      361 gcccttcagc atagcatgcc ccaatgaaac agccggcgaa gtttattttg cactttatca
      421 atacagtgta aaccagcatg tgcttacctc cgtggggtga ctgaacccaa cttgtctgtg
      481 tgcacagaca gcactttggc cacagatgtg actggttaac tctacaagca aggaggataa
      541 atccacacaa caatacttca ttcaccaagg aaatctgctg tggattacag cttctctatg
      601 gttacgtctg ttcttaattt actgctttta ttcagttttc aaccataaat gagcccctta
      661 tgaggcattc actatacaga attgacaact ctttttatca aaaatatttt tggataataa
      721 tttatggtta cgaaatattt taagcagttt gaatagttac attatattct ttcagtactt
      781 aatgatgcag tatccgctgt aaaaatggag acctgagcaa tctattgatt tcacatattt
      841 ataacaaaac acagcagcct tggccataca gaaatacaaa ttttaaaact gcatatatca
      901 tggcaatggc attgtgtttt ttttaaaagc tcttaaacag catctcatga ggaaatcctg
      961 agccagagct gtgactaagg gccctgtgga tgggaacata aagaaaatct tttggcaggc
     1021 atgatatttt gtttatggcc
//
LOCUS       KCKM01000223             843 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3546apa ultra-conserved element locus
            uce-4211, sequence.
ACCESSION   KCKM01000223
VERSION     KCKM01000223.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 843)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 843)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..843
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3546apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>843
                     /note="ultra-conserved element locus uce-4211"
BASE COUNT          252 a          196 c          158 g          237 t
ORIGIN      
        1 ttaatgagtc taatctgatt aacatcacca ttctctccct tgtgtggaaa caatgtggag
       61 ccaaatttag taaccgtagt tttatgccac atcaccctgg gtaccttggt tcgcgaggca
      121 catctggcac caccagcttt aacttttacc tcaacaccct ccatccacgc cagcggagcg
      181 cgggtttgat tgggatgcta aaatacaagg gaaaaaaatt aataatccat caaatcattg
      241 tttggtaaac ctgcccatcg ttaaccaaaa agcacaattt tttacctcaa cgggaagact
      301 tcatttggtc tgcgtgtgac tagggagctg atttcatttc ctgtaaaacc ccctcaaata
      361 ctgcaaagtt acctgactca gctgcttgta gaaatcaaat tcagtctgag ataacagcta
      421 atcatttgtc acagtaagaa gcaattccct gaaatcggaa gggaaaacct gccgcttcaa
      481 tccgcaggtc tgtcagattg ctagaaatta cattctgctc tgactaacct ctgcacttgg
      541 attgctaaca acaagcagcc cggtctatca aaagagaata tcatacaacc aggaacagct
      601 tttgatttgt tctattccaa taacctgaga aaagtttatg gacatgcatt gccgcctaga
      661 cctcaatttt cgccaacctg cgcactggtt tgaattatag ctccgcatcc ccacggtaat
      721 gtaggtaaaa tttacaggct gattatctgc tacttcatag gaagaaaatt agagttgatt
      781 ttataaccgt acaaccgata tttggtcttt gagacgcgca gtttggatgc tccaattaaa
      841 atg
//
LOCUS       KCKM01000224             509 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3562apa ultra-conserved element locus
            uce-5102, sequence.
ACCESSION   KCKM01000224
VERSION     KCKM01000224.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 509)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 509)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3562apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>509
                     /note="ultra-conserved element locus uce-5102"
BASE COUNT          178 a           84 c          101 g          146 t
ORIGIN      
        1 gaggctaccg gctggaagac agattttaca acagagcaat cgcagggtgt aggttttcgg
       61 caataagcag gtagcctcgt tctcacaaaa gaaaaaagaa aataatggaa aactgtaaca
      121 ttcatttgga ggcctcaaag gcataaaaaa cccaattcca actgttatag gtccctgcag
      181 gagtctacaa aagaactaag ctttttaagt aagaaaacta gattttggcc cagagggccc
      241 tgtcactgct gcttaataga tgaaactctt ttgatacaaa tatgctgttt acttctcagc
      301 ttcagctttc ataaaatata acctttttat gatttacgac cccagaaaaa gtgcaggatg
      361 gatttttagc tctgaattgg ttgaatgtca acaagaaaaa tatagataac atatagaaat
      421 agcagggtgt taatgccaca caaaatgatg aaattatttt tgtttagaaa agttcagttt
      481 gttcttaaag ttctttgtga gtgaaactg
//
LOCUS       KCKM01000225             396 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3578apa ultra-conserved element locus
            uce-5041, sequence.
ACCESSION   KCKM01000225
VERSION     KCKM01000225.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 396)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 396)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3578apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>396
                     /note="ultra-conserved element locus uce-5041"
BASE COUNT          146 a           65 c           55 g          130 t
ORIGIN      
        1 ggtcctttca agtatgctcc ttttgtttca gttttacagt aagactacca gcagcagttt
       61 acaattaagg gaaataataa taactacgta tgctttcatc tgcacatata attacaataa
      121 actgcatgct ttaataggat tgtgaaaaat ctgtgtttga cccatacaaa aaagtaaaca
      181 ttcttgttct ggatactata tcattatcac aacaaaggga aactcctgaa atctgatgat
      241 ttaaacatct ggagaatgtt aatcacttca aaatgacgga tgttttttat tttagctttt
      301 gacagacaca ctcctttcat agatagatga ttatttacat aaattacatc actaatgtga
      361 aaaaaatcca aaataacttc aaagaataaa gagctt
//
LOCUS       KCKM01000226             632 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3593apa ultra-conserved element locus
            uce-336, sequence.
ACCESSION   KCKM01000226
VERSION     KCKM01000226.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 632)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 632)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..632
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3593apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>632
                     /note="ultra-conserved element locus uce-336"
BASE COUNT          202 a          140 c           88 g          202 t
ORIGIN      
        1 atgactcaag ctgagtttca caggtgaagt tcagatgagt tcagatctat tcaagccctc
       61 tcaatgttcc catatgcttg actcaagtcc aaatatttaa ttgtcagctc gaaacaaaaa
      121 cttccaaaga agaagcagag gagggattct gaactctgct ttccagcact aaggacttga
      181 gctttttttt ttttataatc tgtcatttgt actttttcat actaaaggtg acagtctaat
      241 tcacatatga ccaacaccca taaatcatgt tggggggagg aaatattcat aaatccatat
      301 caaacagcac ccaaattatg acaaatgaca tggcagtcat aaaattgcac aagcacaact
      361 caccaagtca ttaatttcat ggccgtggaa aataaacaga cacatttttt tcgcagccct
      421 aataaatttt aaaaaactca aagaatggtc catctgcttc gaataatttt taatttccta
      481 ttctgtctcg ttcccattag ctattccact gagatatttg ctaaattctt tcatttgcct
      541 cctcccatct gtattcaatt actctattcc caaatagagt tagtttttct ttctcctaag
      601 cacagtacaa aatatcccca cctgtacctt aa
//
LOCUS       KCKM01000227            1160 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3608apa ultra-conserved element locus
            uce-2857, sequence.
ACCESSION   KCKM01000227
VERSION     KCKM01000227.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1160)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1160)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1160
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3608apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1160
                     /note="ultra-conserved element locus uce-2857"
BASE COUNT          362 a          192 c          201 g          405 t
ORIGIN      
        1 tatgtgtaca catgaaacaa atatgtacaa ggctatgatt ttgtgaataa agcttttgac
       61 ctgtaagaca aaagaagatt aaggctcaaa accatattga atatttgcgt aatgtgacaa
      121 catatagaaa gctacttgca ttattccatt aagaggtaaa attattgtct tcagaaatta
      181 catagtttaa acttatgtta aaggagttta tcacagcatt ttaaaataaa ctcagctgtt
      241 ttaattaagt ggaaatttga ttgtaagtat ttttttgcag ttggattttt gaagtgttgg
      301 gacaggttcc gattcaaaca ctgaacttca cgtatttttt gccaacagcc tatgaatata
      361 atttctactg atttaagaat ctaatgtcag ggtggtaagg acgcaattag ctttagttta
      421 agtgatagca acatgctgta aataagattc ttaattgtgt ttgcaagatt aaaattcagt
      481 ctcgtcgttt ttttcccgta cttctttggt ggctttgtgg tatattcgca ttgctacctc
      541 taaatgaatg tcaacttgtt ttacctcgac tgcagccaat cgatacttca ttaggctgaa
      601 ttgtcttgtg cccatgcaac cttgaagctg tggcttaatt accacccgta ttatgcagtg
      661 gctcagagag ctgtgctcag ctgtgtcagt tttgaacaaa agccatgctg ttgcctgtat
      721 ttaggaaaaa tggacttctg aactaaagaa ctataatatt ttctaagtta acaatccatg
      781 atgataacct tttttaaact gtgtatgtca gttttcagta agtttacatt tgaatagatt
      841 tctacatatt gcaaaacttt aaaagacaag taccttcgct tttcatgttc aacccatcgc
      901 tgatttaaga taattttaaa ttaatggcaa agtaacattc atctgaaaga gaagacagga
      961 gaaagtgcag tcaaatggca atcatgacaa atgacatctc ttgtctgaga gtcatttttc
     1021 ctcactagac tgatttgtca tccccacttt tgacattttt catcctgcta tgaaatcaca
     1081 ttgacagaat aagatatttc tacacttaac actgggccat agaagacagt tctctgccgt
     1141 catttatttt ttgtattata
//
LOCUS       KCKM01000228             739 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3622apa ultra-conserved element locus
            uce-3089, sequence.
ACCESSION   KCKM01000228
VERSION     KCKM01000228.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 739)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 739)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..739
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3622apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>739
                     /note="ultra-conserved element locus uce-3089"
BASE COUNT          180 a          191 c          182 g          186 t
ORIGIN      
        1 gaacacactg ctgcgcggct ccgggggcaa atgtatccac tgtacatttt gttgcttctg
       61 tggaggccag gttgtgtaca cacaggcctt cctcgtaagc tgcctgtgac ccaactgatg
      121 catcatgtag acctgacagg tgtgtctggt agctctgacc tcggagctca agcgtaaggg
      181 actgcaccgg agctctgcac cgctctgggt agcagagctg tcatccgagt gcgtagctgc
      241 gcgcttgcat ccagcacgga aggtgttggt gtgctgaagg taggtttgtg ttgcccactg
      301 ccatgccaat tactggatat taatggcagg atagtgtgca tatgcctaaa ctgggaagca
      361 gaaggttaat agacgaacag caccagaaga tcccatttat cagtttctat ttatctctcc
      421 ttgggaggtg gcaggtttac agtaaatacc ttctgtcctc ctaatttcct aatgatgggc
      481 ataatgatgg agaatggtga agtcattaac tgggacagcc tctgtgcatc actctgtcaa
      541 ccacatctct ccaagacctg caatgaaaag tgatgggcca cagctgttca ccagattctc
      601 ttcccttccc cccgtcccca ttctcaaccc cagttgcaga cttagcaatt aaaaacggaa
      661 acccacaaac caaaagaaaa gtcagtccct tttccgctgc agagaaagcc cagtcggtcc
      721 tgaaccttac gtgtgtgtg
//
LOCUS       KCKM01000229             233 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3637apa ultra-conserved element locus
            uce-1979, sequence.
ACCESSION   KCKM01000229
VERSION     KCKM01000229.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 233)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 233)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3637apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>233
                     /note="ultra-conserved element locus uce-1979"
BASE COUNT           72 a           43 c           50 g           68 t
ORIGIN      
        1 tgtttgactt tgcctgccag agaatgagaa tgcaaggccg ggtgtaattt aatgcaaacc
       61 ctggcctatc ctggtcatgc atatgactga ccctcagggc aagaccatca attttctatt
      121 aaagatcaga gagttgacat atcaaagtca acatctagct gaataactgc agtaacttga
      181 taataattct tttgtggatt tcagagtggc ttttcagtaa agtatcagaa agg
//
LOCUS       KCKM01000230             886 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3652apa ultra-conserved element locus
            uce-4822, sequence.
ACCESSION   KCKM01000230
VERSION     KCKM01000230.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 886)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 886)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..886
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3652apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>886
                     /note="ultra-conserved element locus uce-4822"
BASE COUNT          248 a          229 c          193 g          216 t
ORIGIN      
        1 aggctgtagc agctgaggag cagccacatg ttgacctcta ctagctcagc agtggcagat
       61 gggtctccag gagaggggta gcagggccag tgagctggga ggagatcatg tctgtgacag
      121 acctcattgc ccaccaaaac aatgtctgct aacacatggt acataacacc ggacttttct
      181 ttttccctct agagaaggct accattggct taaccccagg acaaaagcac cttgggatgt
      241 atccttagtg ccttctgccc tctgaggagg ccagcaaatg ggtctgctgc tccaggcagt
      301 gctgcaccaa accaaacagg tgtccctcag ctccaaaaca gcttcctcct gcccctaaaa
      361 aagccccact gctcctttaa atgtggtgca tgttaaaaaa aaaattgaca atctccctca
      421 ctctcaaaag agtgagaaat tttcattgat tgatttcttc atggcttctt aaacagataa
      481 ttaattcacc gtgaacctgc ggacacaccg tcgtgagtcg ttaatattgt aaattcacat
      541 atacttcaat aatcgcctga cccccccgtc accccgaaaa acagatagct gtgcagcgag
      601 gaggagggga atggggggaa ttgattttcg aagacatgaa gggatcaccc agcaaaggga
      661 agctattgat tctcttttat aagacactgc tataatattt attcttttgt aaacagaatt
      721 aacccagcat catgggtcat tcctatcgaa caactttcct cgcatgtgca cagcaatgct
      781 gattgtatca gatgaggtag aaacatccaa actgcaccac ccaccctggt ccacacctcg
      841 gcatctgctc agcttgtgct tgcaggatcc tgcagtggca caagcc
//
LOCUS       KCKM01000231             741 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3668apa ultra-conserved element locus
            uce-6003, sequence.
ACCESSION   KCKM01000231
VERSION     KCKM01000231.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 741)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 741)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..741
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3668apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>741
                     /note="ultra-conserved element locus uce-6003"
BASE COUNT          250 a          138 c          122 g          231 t
ORIGIN      
        1 gcacattcaa agaaagcaca ggttttataa gagtatcctg tttatgttca tactattcct
       61 cccttatctc aaggatgaag atatattaat ttttgtttgt ttttcaagaa aaaaaggtta
      121 tgttgcagat attcatgggt ctgataactt cttacagaga gcaccttact cgcatgcttt
      181 tgttagacaa tggccaaaag caaattaaat atgatgctta aggaggctcc tgccatgcac
      241 atacatttga ttttataatc acccctcaaa tgcttctatt tctctcaata agggaaaaga
      301 ttctttggct gcttctgtca cctggctgaa gaatataaat aaagaaaaag ttactgtgtg
      361 cagttaatat cgaacagcag ccatctccag atgatccctg ctgcatccaa tttctgccaa
      421 aatgctttct gttaaacctc catcaaacag acacacggcg cacaaaagaa aacctcatca
      481 ccaagggaaa ctaatccacc ggtgcgcaat gtaagcctgt caacttttta ttataagaag
      541 tcatcactca tttcagtgaa gattaaaagt atgactaaat tgagaaaatc ctcttagcca
      601 ttcggaattt taatagagga gaaaaggggg tgagtaaaat ttaaactgta tgtgcatgtg
      661 tgcctatata tctatctata tatgtgtgta tgaatcaaat atataaaatt acatatatat
      721 cttcacacac aagttatatt t
//
LOCUS       KCKM01000232             910 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3683apa ultra-conserved element locus
            uce-3359, sequence.
ACCESSION   KCKM01000232
VERSION     KCKM01000232.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 910)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 910)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..910
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3683apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>910
                     /note="ultra-conserved element locus uce-3359"
BASE COUNT          309 a          154 c          138 g          309 t
ORIGIN      
        1 ttccagttta caactgtaac agccttgtaa acatcaagcc aggcttggat tcaggaatcc
       61 taaaagactt tttaaaatgc ttgtacctta aagaacagat tccattactg aatactacaa
      121 tttcttatat tttcaaataa attatagtat ttaattgtat acagatacac tcaagatttt
      181 ttcccagact gctcaaacac aatagacaat gctattttat ggccatttga attatttatg
      241 tttcctaacg acaaaaactc gtcagttttg attttggtac caaggtgctt gagaagtaca
      301 cagtagtgtc attaccataa taacttctga aattaaaacc tgtctaaaac tctatggaaa
      361 gctaacatcc agttcattaa ccattcctgt tagtttgttt tcaataatgc aaaaatgatt
      421 agaagtttaa tttgctaatc acctgtgttt tgactggcag tggatatata attctctgca
      481 gaagtctaaa ctagcccttg cagaaaataa aatatgctaa tgctgtatca agtctaataa
      541 tatgaataaa aaaatcaatc atgcctaggt taatcattga tggatgcaca attaatttct
      601 ccttaactct gtttaatttt agaggcactg atgatcatga gtaagagaaa tggctatctg
      661 tctttgagaa gttttagtgc ttcacttacc aatcatgtgg tttgcaacat gaacttggat
      721 atcccattca ttgtagaaaa ccatctgaca tttgatgcac tggtaggtct tcttctaaag
      781 aaacaagggt agataaaatt tactgaaaca tacaattgga accatttcat tatacctcaa
      841 aattatgagt tcaaagtggt cacttaaagc tctgcagcag tgttttcatg aagtcttaat
      901 tattaatatt
//
LOCUS       KCKM01000233             804 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3699apa ultra-conserved element locus
            uce-2474, sequence.
ACCESSION   KCKM01000233
VERSION     KCKM01000233.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 804)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 804)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..804
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3699apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>804
                     /note="ultra-conserved element locus uce-2474"
BASE COUNT          257 a          149 c          230 g          168 t
ORIGIN      
        1 tacagaagcg attgatgttt ggggagtgaa gggaggaaaa catattttcc ccaaaacaaa
       61 gtgcagaaaa gagaggggaa agccccagca tacccatctc tgtgagagga gaccacaggg
      121 agtgcgagag tttccactca ccagggaact cacaaatgac tgatctttca ttttataggc
      181 acagaggaaa agagaaggag aaaaagcagg aaaaaaaata agagcacaaa aaaatatgag
      241 agagagagga agggaaagag ggatggtgac agagagagaa aggaacacgg aatgaaagag
      301 aaagagagag acagccgaga gagagggagg ggggcaggca gaagagggct ttgaccttct
      361 gtgaaggata taaaaaatcc agcagcctca ggggacaccc aactatctag catattgctg
      421 ttaaaatgtc tgcaaaattt aatacacttg gcatgccatc taatcagtcc ttggaaacca
      481 cggtttttct ccctcctgca ctccaactgt ctcagacctc cagcatttgg ggacgaggtt
      541 gggtattttc tacagatgac aaagtttggt gtacgcacac agggtagggt tgggggttta
      601 atttgtgttt catttgcctt tttatttttt tcagggggaa gcaaacagct gctattttcc
      661 cttaaaaaaa aaaaagtttg cgtagattcc tgcatgccaa agagctgctg ctggatgtgc
      721 cgggtatgag cctcgcgcag agcgtgcagg cacacgagca cgtgtgcgca cagatgtgat
      781 ggacgcgcag tcggtgccga gggg
//
LOCUS       KCKM01000234             930 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3714apa ultra-conserved element locus
            uce-4175, sequence.
ACCESSION   KCKM01000234
VERSION     KCKM01000234.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 930)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 930)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..930
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3714apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>930
                     /note="ultra-conserved element locus uce-4175"
BASE COUNT          253 a          172 c          181 g          324 t
ORIGIN      
        1 tttttaaata atgaaaatct aacatctgac ccttcagata tggccagcag aaaggatttg
       61 cttctccagt ctcttaagga cttgggtttg ctgtttataa tttctatatt ttgcttggat
      121 tcagcatttg tctctgtata agggtgaaat taagcttgct atttttctgt cacacataca
      181 gacacagtca aagcttgttt gatgataaga actcaattca ggatctcatc ttttgccctt
      241 ggcttcaact tatgtacgcc tttgtctgta ttgtctgtac tgcaaacact tatgcgtgtt
      301 tctgctatta tatgtagact gaatatgtca taacacatga atgcaaaagg atcaaaaatg
      361 ctttcctact ttataatctg ctcagccaga aacagactct gtttctacat tgccttttcc
      421 tacatgtcat attatcatca gctgttctta tatcccaaaa gaatactaac tactgatcga
      481 ttgcccggac atgtctggcc gtggcctaca cgtgccccag gtagttcatt tatttgccac
      541 ggtggatttg ctagagtgga atttaatcaa tagctaattc attaattctg gtgctcgagt
      601 atgtagggat tgtgcagtat aaaaatgact ggctggcttc agctttgatt gaaatatgac
      661 aaacactaca gctgacagct tcaggaggtg ctcagctgaa tatgaatttt gcttatttat
      721 ccttcataaa agaaaaagct tgggcaaaag cttgggctca tgggatacct gagatataat
      781 atagactgtg cagtttagtg tctttaattg gaatcatggc atttttccct cttctggatc
      841 actttggggg gctgtattat tgatgggagt gctctaggat aatgtctttg tagcattcac
      901 aaataattgt tttaaaattt gcctcaaggt
//
LOCUS       KCKM01000235             988 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3730apa ultra-conserved element locus
            uce-5125, sequence.
ACCESSION   KCKM01000235
VERSION     KCKM01000235.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 988)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 988)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..988
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3730apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>988
                     /note="ultra-conserved element locus uce-5125"
BASE COUNT          308 a          185 c          239 g          256 t
ORIGIN      
        1 aagggatggg ggggatttgc agcgcaacct ggatcattag tggttgatcc tgcctcccgg
       61 gcacggtggg accgtcctga aaagctccag gcggagagga agggaaagag aaagagaaag
      121 gaagagagag gcgagagtca gccagagcga gaaggagcct cggcttccct actgtacaaa
      181 taaactttaa ggaacttgtg cacaaaactt acctttgact tgcaaggagc catttttcat
      241 acagtattga gaacttgtgg tttggatact tctgtcccta aacctgacaa tttgaatggc
      301 caggaggcac acgtagcctg caaaagagtc aaatgaagtc cagcgtcagt gagattatat
      361 gttatgtggt atataatgtt ggatgtcaac tccccaaaac cataaaactt actttaatgg
      421 caccacgtga ctttttatag ccagtgagcc tatctgtctg tgctatggat gattttacga
      481 tctaattcat agacaaaacc ctattcattt ggcacccaaa tgtcatatag ccggaactgg
      541 ggcttataaa gtttactgtt ttataacttt taagggaagg catcaatgta accagtcagt
      601 aaatgtgcaa atctttagtt gctcttagaa gctcagaaga gttaaccatt caagctctga
      661 tggggtaagt aacattacgt ttatagcaaa ctaattgtag cgaagaaaac aaaaaatctt
      721 taaagggtga taagtgggaa tgtggctagc gagggttact aatagacgca gagggctcgg
      781 atgtggctgt ccggcaaata tacttaatga aaccacagga gaaattctgg agcgatgcaa
      841 acacgtcttg gagttagcaa cgtgttttaa caaagcacat gttttggttc tttaaaacca
      901 tcagcaaaca actaacagtt gattcagcct caaagggtgt tgattgtggt cctacgacgt
      961 agcttttcac ctagcgagaa accgttaa
//
LOCUS       KCKM01000236             364 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3745apa ultra-conserved element locus
            uce-5989, sequence.
ACCESSION   KCKM01000236
VERSION     KCKM01000236.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 364)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 364)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3745apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>364
                     /note="ultra-conserved element locus uce-5989"
BASE COUNT          104 a           83 c           63 g          114 t
ORIGIN      
        1 tttacaggcg gctgcattct gtcccagcct gaattcataa acctaacttg atcgccttct
       61 gaagaattta tgaatcatgg ttaataatca gctttaggcc cttctgaggg aagaatcaca
      121 ttttgaagct acaaaggtcc actaaatagc ccacgggaaa tgaccctgca tcccattaaa
      181 tatgaaaact cactactgca agattctatg tcagaggtaa aacatttcag tgtctgctcc
      241 cttaaagtgt cagagagctc cctctgccta aatgctttat taagattgaa gaagcatacc
      301 agatttccac ttctcagcaa aagctgtttt cttctgcttt tattttagtc cctttacttt
      361 tggg
//
LOCUS       KCKM01000237             883 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3759apa ultra-conserved element locus
            uce-7361, sequence.
ACCESSION   KCKM01000237
VERSION     KCKM01000237.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 883)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 883)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..883
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3759apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>883
                     /note="ultra-conserved element locus uce-7361"
BASE COUNT          259 a          167 c          179 g          278 t
ORIGIN      
        1 acttgcagat ttttttttta tttttttttt atcagatagg tatccattag ggggctctcg
       61 aggtttaaga tgatcagcct tgatgccaat ggcttcggag ctttacttcc taaccctttt
      121 ttctttttgt tttacagaaa aggtcacgaa tcgcctacag tgatgaggtg cggaatgagc
      181 tcctggggga tgacgggaat tcctcagaga accaggtagg atgctaatca agaagcccta
      241 gtgggtggct ggagggtgaa ggaggtcact ggcacactgg gcttctcaag ctgctcctta
      301 acagcattag caacaactca tgtggaagtg atactgttta atgcaaagct ggggtcttaa
      361 tcaacttcaa aatgtttctt ggagatctta catttaaccc tttaacttgt gatcactgtc
      421 tgctatctta aaaaaaatct tttcttctct tttctttatt atttagtact taagaaataa
      481 cttgaaacgc gctgtttgcc gacaaagcca aggtcttcac ctcaaacaca tgtaaaagga
      541 atagaaaaag tacataatgc agctttgata ataatgcagt ataattaaat caacactagc
      601 aggcaaaaca aatgaaagtg cgctctcaga attaggcagt aacccactca gtttccttgt
      661 gtgattcctt ccctaaacag attttctctc cttgtaccaa aaatacaagt tgtactaata
      721 agagtgtgct ttcataatgc atcttgtacc agaatgcaga gtgctatcca tctcttaata
      781 aaggagagct tgataatcct gaggcttttt tatatactcg tggtgttgtt gtggacacta
      841 cagtgaggat tctgatagac agctgaaaat tgtaatgaca aca
//
LOCUS       KCKM01000238             986 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3774apa ultra-conserved element locus
            uce-5259, sequence.
ACCESSION   KCKM01000238
VERSION     KCKM01000238.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 986)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 986)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..986
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3774apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>986
                     /note="ultra-conserved element locus uce-5259"
BASE COUNT          229 a          295 c          274 g          188 t
ORIGIN      
        1 tactgcttgc ccagagctgc atcccctttg cagctcccaa gcagcacgag tccctctgct
       61 aacgagcgac ggatgtgatc accgtgaaga tgctcaaccc ccggcttgtg gcaagcgctg
      121 ccatgcagga agggggggct gtcctcgctc catggggaaa aatcgcctct ccccgccgca
      181 cctcagcatc ccagtcctga acctgccaga tctgagggcc aagggccaga gaggcacgca
      241 cccaccatcc cacccggccc tgcccacgga gcggcaaggg ttaagtccag ccggcaaggc
      301 gcatctctgt tgcaagagtc cattacctcc cgccacatta cctcattcat ttcttatatg
      361 cggatggttt attctcccat gagcaccctc gctggcagac atggctagtg taaagtcccc
      421 tccctcccct gtatttctct atccatcaca tttaacactc tgacagtaac agtctataat
      481 gtttctattc tacaaaaccg ctctgtcaac tccgggcttc cagagcagca actgaggaaa
      541 ataaataaca tcaacgccag gcccgacagt atcacagctt gctttctgct gggggtttta
      601 ttttcttttt ttgcagaagg gaaaaaaaag agagtgaggg agaaagggga aaaaaagtgc
      661 aagcgtgtaa cgtgcagaga gacaggcagg ggtttccttc ccacccaaac gaaagggctg
      721 ggagagcctt ggagatgagc acggcacttg cgatgcagag gaacggggag acagttgccc
      781 ccaccctgct cccatattcg ccagggacat gggagctgtg agggaggggg aggcagggga
      841 ccgcacccca gctccccttc caccccagct ctgcctccac cagccgaggg cgagcgcagg
      901 ctgccggccc ccaagcgcag gaatgggctg ggcagcaccc gcagagggta tttgggggat
      961 ttgccgaggg ctggcagtga ggggga
//
LOCUS       KCKM01000239            1065 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3790apa ultra-conserved element locus
            uce-4808, sequence.
ACCESSION   KCKM01000239
VERSION     KCKM01000239.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1065)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1065)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1065
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3790apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1065
                     /note="ultra-conserved element locus uce-4808"
BASE COUNT          342 a          239 c          173 g          311 t
ORIGIN      
        1 atgttgctct ctctgatgag catctatact tctgcaatta taagggctgt tttacagaga
       61 aataggggca aatgatgaag tctatgggac tgaaggatac tttcccacgt agatatgatt
      121 ctggaagacc actaccactt tcagtgctat gaaccataaa ggcagctttt acagttatta
      181 ttccagcatt tatacctaac aaaacctgcc aaccaaaatg tgcaaaccta taattacgtg
      241 gtgtagcaac tccagttttt acataaacat tttcatttgg taaaatcgtt ctctttctgt
      301 caccaatgcc ttgcctttac agatgtgcca tattcagttc tgtttatctt ctgtctttct
      361 acctacaatg cattaactag ttccagtggc tttcttgaaa gcgtaatgac ttttcctgta
      421 ctctagtaaa aatatatccc cacaaatcaa gaggaagcag gctcagacta agtggctgag
      481 aagatttaca ttctattgct aactcagtta ttactctgct gaaaacccca tagcatcaat
      541 ataatgaatc cctcaacctc tgctgctagc acaatttttc ttcccaacct cattggctcc
      601 caactttctg cttgaccttt tacaatctgt gtgcggcaga acttcattac aaccttttaa
      661 tgatgcacaa atggcacaca acaccaaggt cacagcacat cccaagtgag aacttctcca
      721 acaccttctg aacagacagt gagttttcat ttaaagagac agtccagtgc ggaaacaaaa
      781 cccgaggatt tagtacgggt gtcaacagct actaacacac aaaaaagtga ccatgtcata
      841 aaatgagtac ctgctcctcc aaaaatattt taacaaacaa gttgatgcct gaagctttca
      901 gtgacctaat gaataaaatg gctcacttag gaaacttggg ttttcctgtg cagaaaggct
      961 attcaaatcc tattaaaata aaaaataagc caaggggtta gcaacattca tccatcttag
     1021 gacattcaaa atcattctaa tgtcagagca gtcaaatgaa tatca
//
LOCUS       KCKM01000240             839 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3804apa ultra-conserved element locus
            uce-2616, sequence.
ACCESSION   KCKM01000240
VERSION     KCKM01000240.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 839)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 839)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..839
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3804apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>839
                     /note="ultra-conserved element locus uce-2616"
BASE COUNT          187 a          210 c          264 g          178 t
ORIGIN      
        1 aggaatggag gagaatggga ggagcgagaa catggaaaaa gagataaaag gggaagggtg
       61 ggaaagggga ggaggaagag gggaaaccaa agaggtggca cttgtcacca gtgctgcact
      121 actcagaact ccagtatccc acaaagtaag gacgacccaa gagagtagcc aatgggattc
      181 atcccacccc accctcccac tcttcacata caccccaagt ccctccccgc gctcttcccc
      241 tctcactcaa acgtcagact caatactgga gagtttctca taaacatgcc cgttgctgga
      301 gccattgaaa gccctggggt ttttgttgtt aggcacacag gggttggact ggttccctat
      361 acagatgtcc ttctggaaac gggctggcac agccccatga agggctgaga ccaccggctt
      421 gttggtggtg acgatggctc ggaagtctgg cctggctttg ggccctcctg ccaccacagg
      481 ctgcctgaag aaataagatt tgctgccgtg gagcaagcat tggtcatccc caaaagtggg
      541 gatgaaaggg ttttgggtga cccggtcggg gtagagcgac ttgctgagca tgtagccccc
      601 gctgctgccg gggttgttgt ggtggtggta gctggtggcg ggcactgagg acttgttgtt
      661 ggcaaaggtg gtctcactgg ctggcatctc aaacatgtgg gcgtaggggc tcccctccaa
      721 aaagcggccc ttgtccttga ggctgacgct gcgaggggct agggccgagt catccttctg
      781 caggtccaca aaggtgtcat aggagtgctg ccggcggagc ttgttgcggt tcttcttct
//
LOCUS       KCKM01000241             719 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3820apa ultra-conserved element locus
            uce-3153, sequence.
ACCESSION   KCKM01000241
VERSION     KCKM01000241.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 719)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 719)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..719
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3820apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>719
                     /note="ultra-conserved element locus uce-3153"
BASE COUNT          164 a          171 c          179 g          205 t
ORIGIN      
        1 ttgtacggct gcgccagatg tgggaagagc gtgcccgggc ggagcaaccg ctgtgtgtgt
       61 gttcgtgctg tgggtccctc agccggctct gttcagcgcc tctgagattt ctcctgggtt
      121 tttattccca ttgtacgagt agcatgcttt agcgtttctt ctcactctct tctccccctc
      181 tgcctccccc agcggcctgc caggctctaa atataggtca ccccaggcaa ttagggaaga
      241 gttgctggtt ttgaaagata ttcagcaggc aggaagccca gtttccaaat gagttatcag
      301 gtgagatgat gtttggcctc agccagagtg attgacaggg ggcctgcatg ttcacagata
      361 cattatttaa acgtggtgag atataagaga tcttctgcac taattacttc gaaggctgta
      421 ttaatcacaa gacactttaa tactcaatca atacgtgcat ttgtcaatga ccttgtaaat
      481 ctcctccact ttaactctgc tgtgtggcca aagcagtcgc tcaacatctt ggggtggctt
      541 gttttgttcc actgctctca gtaatacata ttcaacaacc cctcaatctc agctttaaag
      601 ttcgatttct gaggtggaaa taggaagagg acagacgcta aggcgaccgg gtagctgtat
      661 cctaaccaca gcgtcgtcat ttttggtgtg agctgggaag catgtctgct gaaggggac
//
LOCUS       KCKM01000242             985 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3834apa ultra-conserved element locus
            uce-298, sequence.
ACCESSION   KCKM01000242
VERSION     KCKM01000242.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 985)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 985)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..985
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3834apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>985
                     /note="ultra-conserved element locus uce-298"
BASE COUNT          290 a          224 c          170 g          301 t
ORIGIN      
        1 ggtcacgtgc aagtcttgca ctaaatttgc tatttaaagc ataatagact gggcttagac
       61 cagccatttt ctgaaacctg agtctttaat agcatgaaga gcttttaaaa ttcttgagtt
      121 gctccaaatt atttccaatt aatacaaggt cacccctttc aatctgcaaa ggcaaactcc
      181 tcctttatta acgtgttgat aggacccaga gtgcattcct gcactcccgg aatacaactc
      241 tgcagcaagg ctagcctgag cacaattctg taccagatgt gtcacattat aagattttca
      301 gattcagttt cagtctctct gtcgacagcc tgtcatctgt tggagtttat catctaccca
      361 ctggtaccat tcattggttg ccaaagcaag gcaggtcaca gacaaataga cttagatcta
      421 tgttgccact aaattgaaat ttggcaacaa tgtcagccag agcaaacagc tgttatttta
      481 acgacaagca aaccaattct gtccttttaa attatgttaa tataaaacag tgtcacttca
      541 catatcagag agctttcagt tctggagccc tttgaaggcc acgcagactg aatctattca
      601 gccttcattt ctttttgaca aacagatcca atgttctaaa aataacaggt gagtaagaga
      661 ggtggaattc atgataaaaa agcctcctga cactacatgc actgtaatct atctcttccc
      721 tgcctacaag caggcatatg tttgcaattg cttcttctcg tccccagtta ccattccatt
      781 ccttgaggtc tggatttcaa actggtgcag ttatcaatca cctagcaggc cttgtcaaac
      841 ttgctgaact gctggcagtc gtactttctt aacatttgct gaatttgttc cacttaataa
      901 gccctcccaa atgaccttac tctaattaac agcagctatg taagaaatat gatggttaat
      961 taatgatgag ataaattccg tctca
//
LOCUS       KCKM01000243             350 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3850apa ultra-conserved element locus
            uce-2665, sequence.
ACCESSION   KCKM01000243
VERSION     KCKM01000243.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 350)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 350)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3850apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>350
                     /note="ultra-conserved element locus uce-2665"
BASE COUNT          105 a           69 c           63 g          113 t
ORIGIN      
        1 gttataaaat attctgacat attttaatat aaacaggaac attttcagtg attgcttgga
       61 tctaaaatgt ttttccactt gacatttgtt tatacttcct aggaaagaaa ctctatttat
      121 ggataactga ataacacaaa taaacatcag agagagctga aaaatcagct ttgattatgc
      181 atgaaaatct acaatgtcat tgtgtactct tgcgccgtat tctgattgcc tgtttatttt
      241 tacagagctg ctggcgagcc catggaagaa gagccagcct tgtgaagtgc caagtcctcc
      301 ctgatatttc ctgtgggtga catcattgtg tatcccccca aagcaccctc
//
LOCUS       KCKM01000244             761 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3865apa ultra-conserved element locus
            uce-3997, sequence.
ACCESSION   KCKM01000244
VERSION     KCKM01000244.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 761)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 761)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..761
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3865apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>761
                     /note="ultra-conserved element locus uce-3997"
BASE COUNT          256 a          146 c          121 g          238 t
ORIGIN      
        1 ggagaatcac tcacctacgt ctcctgaaca agcagtccca ttacagaatc cccaaactca
       61 cctggaagtg tctcacagcg tttcaaagtc caatctgatg gaaaactcat cacttccttc
      121 agttcaaatc tgtcttgtca cagacacagc agcatcgccc aatttgttca atggtgaaat
      181 cacgaagcgc agatacttat gctttaagat tttctgaatt ttaccagtca taaatctgaa
      241 agacagacac acctttgcaa actcagaact ggatgtgctc tgcaattact tattgtaacc
      301 ccaaacatgc agatcaggat tatctattga aatgccagac gtaagttgtt cattaactaa
      361 aaccattctg taattttatt gatatatttt gtggagttca catatttttg tacagcaaac
      421 ataacactgt aggccacaag aagctgcagc actattgttt aatagcagca aggtatattt
      481 tataatcagg gtatgtggac aataaatagt ctgtttcttt ggatgtgaat gtttaaaatg
      541 aagttctgct gcagcttcat aatgtgattg ctattttaca gagcttatac acaaaaatat
      601 atatgcaatc tttttgtcta tattttatac aaatacaaca gtagtttgtg aatacatttt
      661 aaagtacata tacatgataa gcaactcaat ttcccatatc acaggatagc aaattttaaa
      721 tgcaaaaaac atatacaaat tcagtctgga atgcagggtt t
//
LOCUS       KCKM01000245             533 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3880apa ultra-conserved element locus
            uce-1474, sequence.
ACCESSION   KCKM01000245
VERSION     KCKM01000245.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 533)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 533)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..533
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3880apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>533
                     /note="ultra-conserved element locus uce-1474"
BASE COUNT          180 a           96 c           87 g          170 t
ORIGIN      
        1 tgattaaaga gcaactttag aaatcagtta agctaaaggt taagtgcaga gcaccatttc
       61 agcccaaagt aacttaaccc tactttaaaa agacctaagt gtaaagaaga aagacagtat
      121 ttttcctttt cctttttttt aaagaagcca catgaaatgt tctccgagtt aagttttacc
      181 attcataatg aatgcagtct cgccattcaa atgcgaccat aagtacacag aagataagaa
      241 tttaattaaa tgtagattaa aaccaaacag gaaaacacac tcgctgataa ttttatccca
      301 tcctctggcc atatttttta tacttccttc ttgttcttct ttgggctata gcttatcaac
      361 atgccgatag taccataact cattacatct gatggtgctg ctgaaatgtg caggcttggt
      421 gcttgaattt cagaggcact taaaatgcaa agcatgtaaa tgtctatgtt aaatatatta
      481 gtgtggtaat gttagtgaaa agaaagtgat ttcttacaaa tccttgtacc tca
//
LOCUS       KCKM01000246            1087 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3896apa ultra-conserved element locus
            uce-6301, sequence.
ACCESSION   KCKM01000246
VERSION     KCKM01000246.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1087)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1087)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1087
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3896apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1087
                     /note="ultra-conserved element locus uce-6301"
BASE COUNT          344 a          159 c          189 g          395 t
ORIGIN      
        1 tttaattatt tatctgtgca cttttttata tcttctcatt gcttggatat ttcatcttat
       61 cttaaaaata tttatttgaa attgtcagtg atcaaaggct gggaaacaaa accgagctgg
      121 atatgatttt tttattatta tttatttttt tcttttggag gaaattgaag tgtcaggata
      181 attcttgtgt atgcaaactt tacaagatga agccaatgca aatgttacat cgttaagctt
      241 cgtagtagaa gattaaaact aacatacata tatatgatca attttgccta ctgtgagaat
      301 tcaaagataa ctggtacttc ttgtttttaa ttcaaattaa gtgattttta cttgatcatt
      361 ttatacacac gcactcactc cctcacaagc acacgtctgt gtactgaatt gataaagaaa
      421 gaactctggt taaataatcc acttttgtct gacaacggaa tcagttatag aggtgcaaat
      481 atgcagaaag ctatttggaa atgcatcctc gtagttgtca ggttttatta tgcaggaagg
      541 tgtcatgttt gttacgaagc tgagtgcaga tggcagagtg gaagaaatgg atcactaatt
      601 ttaacaatga ttaatgaaca gagatagaaa atgaattaca ttggactatc ggaggcaaga
      661 aatatttttt agaaaatttt gactcatctg ctgtgctgtt ctctgtaaat tattttctga
      721 aattctatat gttgtcaaca gttgactgca ttttccatta ctgtctattt ctgttcttaa
      781 gtacttttgt gttattagag atacgtaatt tcaaaatacc aatacattcc tgattactta
      841 gagaaaatgt atgtaacact atgaatgttc caaagtctct ggccacaaat gtccttttct
      901 gtaccacttt ctcgttcttc agcattttat caccattaga aatatttagt gtaattttat
      961 ccttttatta atgaaaggag gtagtcagag cagagtaatc gctctgtgtt ttttgtaaaa
     1021 ataaggaaaa acctatatgc aaagttagta ataaaatgca gccaagtggg ttagcgtggc
     1081 tttaagc
//
LOCUS       KCKM01000247             937 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3911apa ultra-conserved element locus
            uce-1224, sequence.
ACCESSION   KCKM01000247
VERSION     KCKM01000247.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 937)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 937)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..937
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3911apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>937
                     /note="ultra-conserved element locus uce-1224"
BASE COUNT          302 a          169 c          161 g          305 t
ORIGIN      
        1 aacagcctta aagaccaagg tgtagtgggg aagaatgtga ccacaagaga aacaaaaaag
       61 gtgcttcaca tttttcacct gatctgccat attcttagaa taaataacaa agctgctgtt
      121 tagatttttt aaaaaatttt tagcaagtat atatttatca atgccatgaa ttagcattga
      181 atttttttta tatttttccc tctaaacagc tagagatttt gcattccaaa caattgaaca
      241 aatagatttt tagactctga tatgagctgt tcaagcaagc agctgtataa cttccattgt
      301 tcataaaatc ctgaatatgt acatccccaa gtaccccctt ccattcaata tatatgaaaa
      361 tgcaatttac tgtatgtcaa atgaaaaatg cagttttcaa atgcatgaca acaggtgcta
      421 gttaaatgat cagacactat ttgttaccta gtctcttact ctcatttgca gcatgataaa
      481 ttgcatttta gcagagtact gcgatctaag gggtcctgac atgcttttat tgatttgcat
      541 aggttatatg catgtattcc tgtttgtagg caaatagtgc cacgactaaa ttcaagtcac
      601 cgtgcctctg tttcaagaaa attgcagtca tcacagggga gccaagatgg agtgaggttg
      661 ggtaaaagag acacatgcag cccattggaa tcttagaacc tctattaaga tttataggct
      721 gcaggattct tttgggcttc aacattattc ttagtaaacc ctttctgtct tcagttgttt
      781 ataaaaactg gcagctttac caaagacaga agcttatgtt gtaggtagca caatttaaca
      841 taatagcaat agcctatcct ccaaatatcc tgatactgat tttgaaagag aaacagtgca
      901 tatccttgat tctctttacc atactttgaa aggtttt
//
LOCUS       KCKM01000248             603 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3927apa ultra-conserved element locus
            uce-7926, sequence.
ACCESSION   KCKM01000248
VERSION     KCKM01000248.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 603)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 603)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3927apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>603
                     /note="ultra-conserved element locus uce-7926"
BASE COUNT          202 a          146 c           92 g          163 t
ORIGIN      
        1 aaaaaggagc ctggagattc agccatatac aatttgtgtg caaaacagtc ccagcatctg
       61 agaacaacac cacacatttc atcatgtagg acagaaaata atctcaacct gtgctgcgtg
      121 agaacataac gccaaaagaa cgtatcacac ctatcaccat ccacacaaaa agagtgctat
      181 tttttccttt tacatattta gagtgcaaaa tcaaacaaat aaaaggaaca ctgcataatt
      241 tagcttccat tttctatcaa attgctcata attgtaacca taaaatgata atattctacc
      301 atatgtgcat ctgcaaagcc gacaaaagca ctggtcagcc actgcgacaa gaaaaatgga
      361 cctgtcgctc catctagtga cctcgcagga tattaccgct ctcagagcac ttgtcaaatt
      421 ttgaggttaa ttttgctact gaaaggcatc taacacatca ctttgaaaca tgaaaatcca
      481 ccttgcaatt ctcctgctac cgttcttcct caaattacgt tcccgttcgt ccacacaggc
      541 agtcacagct ttacataaaa tatccatcac tggaaatact tgctgtttta gttgcaggcc
      601 ttt
//
LOCUS       KCKM01000249             744 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3942apa ultra-conserved element locus
            uce-4919, sequence.
ACCESSION   KCKM01000249
VERSION     KCKM01000249.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 744)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 744)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..744
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3942apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>744
                     /note="ultra-conserved element locus uce-4919"
BASE COUNT          177 a          179 c          184 g          204 t
ORIGIN      
        1 gaccgctttg ccaaatttta agcctttatc ttgcaatatt gctccttccc tcttccctgt
       61 ctgtgctgct ctgtctcacc taacagaggc ttctgctttt ccagaatttc ctacttccta
      121 ccatcctgcc agagcgctgt gggtccaatt tttcccctca ccagagtgca ggctgtaggg
      181 aagggtctgc catagcagta gtcaagctga ttccctttta aaccagacag aggggaaacc
      241 ggttttgcat caaggaggat aagctccctt gatgccttta ttgtgattaa agcagccctg
      301 gtgcttggtt tttggaaaac acatagagcc atgacaagag ctgacaattg ctttgaagca
      361 aacacgggca ttttcccagc agttctaggg ttaaggaaat tgcagagggg tgacatggtg
      421 actgtgttcc ctatttttgt gtgttgccag tagcgagaag ggggaaactt tgatttctaa
      481 tccgctttgg aggaggctcc gtatcagggc tgcacagaaa catccagtca agcagctcct
      541 ttatcataaa ggggatttta attaaaactg ttctcgcatc atgagcggaa tgagcgtcag
      601 tgccagccag ccctgtactg ggcatttatc tccttcaaac cacattacca gtaattgctg
      661 cattaaatca aagtcgaggg agattacagg tctgaattgg gcaggcggcc ggtgccagca
      721 cggggagctc cgtgctgccg agcc
//
LOCUS       KCKM01000250             698 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3958apa ultra-conserved element locus
            uce-134, sequence.
ACCESSION   KCKM01000250
VERSION     KCKM01000250.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 698)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 698)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..698
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3958apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>698
                     /note="ultra-conserved element locus uce-134"
BASE COUNT          210 a          141 c          129 g          218 t
ORIGIN      
        1 tcagagatgt gctacacgca ccctgcacaa tttatcacca tgctgcctat aattaggttt
       61 gttaacatac agcctagtgc agtcttgttg actgggaact taatcaagtt actattgagt
      121 tcttgtatgc attgcttcgg gtgactgttt tacttgcaga attatagctg cgaccaacgt
      181 gaggaaatta gctctggaca caagtttttt tttttttccc cctacatgtg aaaatattta
      241 gcaaacagtg acaatgatgg aaaacagtag gaaacaaaat gttctacatt agtataaaac
      301 atgaaaaatg cagcaaggac cctcagtggt acaacatgtg ttatgctggc tggcagtcca
      361 ttaggcttga tagacatttc acttacctaa gtcaaatata acagtctagt attcattaat
      421 ataagaaggg ggttgtggaa tcaagcctac catctggtta gaacgacaga ataatctaca
      481 actcatgatt aggtctaagg agtggaattt cactttaatc tttttcattg ctcgaaattt
      541 ccatctgcgc agtacggcac atcatttttc ttcaagacaa atgtgctgtt tttcatgttc
      601 caaaattaga tcagaagaaa acgattaatc atgtcatggc ctgggaaagg aaacaaagcc
      661 ctgatatttc tctctctctc tctctctctc cctccctc
//
LOCUS       KCKM01000251             744 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 3974apa ultra-conserved element locus
            uce-6804, sequence.
ACCESSION   KCKM01000251
VERSION     KCKM01000251.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 744)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 744)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..744
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3974apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>744
                     /note="ultra-conserved element locus uce-6804"
BASE COUNT          191 a          106 c          158 g          289 t
ORIGIN      
        1 gctgtgtctg ttttgtggca ccacttggtg actttcactc agtataaatg tatgtaaatt
       61 ttactgcctt ctatcagaga cagagtcaca ctaagtgatt ttactagtca ttataatgat
      121 tcttttgtat tgcagctcct tttaagacgt gatttgtttt cagatgttgg tgctggaaac
      181 ctttttgttg tttagctgat agtgaaacct ggggagagaa gtctaccaac cttttctact
      241 tgaaacctgg gctacttaag tgttattgct ctctttcata aaattaagtc agtgattatt
      301 catgcattct tcagtggtag ctgcttagca acgtgttttc tgtggatggg ttagatcaaa
      361 gtgctggcct gcaggttgta tttttccctt tggtgggatg aagtgcagtt gttttgatgt
      421 taggtttgat ggatttgttt gccactgcat tcattagctt cacatcaaaa aactgacagg
      481 ctgttaaatg aaactttggc ttagattttc agcttgactg ttttgagacc tttgtgaaga
      541 tattttgttt ttgtgctgta gcagcctcaa gcagttatga ctgtttcaaa gggaagaaaa
      601 gttatttagt atcctgattt gtttgggtaa gagagagtca ttgtcttgag gatagctgta
      661 tccagatttt gctatccaaa aatatatatt tattatcaaa tatatattga atatatatgt
      721 atgagttaaa taatttttaa attg
//
LOCUS       KCKM01000252            1089 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4003apa ultra-conserved element locus
            uce-3412, sequence.
ACCESSION   KCKM01000252
VERSION     KCKM01000252.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1089)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1089)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4003apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1089
                     /note="ultra-conserved element locus uce-3412"
BASE COUNT          311 a          228 c          233 g          317 t
ORIGIN      
        1 ttcagcatgg aacctcaggc tgatttttcc agattcttct ccaaaactgt gagatcgcag
       61 ggccatgggc aaagtcattg cctagcagca agcactgact tgcaaaaccc atgcaaaagt
      121 ccgagccaag cttgttcctg tcatggccct acatgttact cgtatcgtga tcagacagaa
      181 tttctccaag gcatacagag agcaggaggg ccacattgga caaagtttct tcttaatcta
      241 aaatctggag atgaacatct ggaaaaaaaa tcacaggcaa tgagtcagtt aatatagcag
      301 ggactttctc cagaaacctg gccagctctt tccgttgaag atctagtctt tggctagctc
      361 tccaaagggg gcttagtgac tgtgtacatt aaaaatgcta tcaccattat ggtctgttca
      421 ctaaaggtac aagagcatga caaatatatg taatttgcaa attggctggt cttttgcaat
      481 aatttagaga cactagttag aggcaataga aatctaacaa ttactgatgt ttaaggtttg
      541 cattgttgct ctgtgaatat ttcatgcata aatgaacttc ccctggacca actgctgttt
      601 ctgatgaggc gctctgaggc tttattgcca aatacacagc agggctcccc caacgagcca
      661 cataacggat gatgcatcgt ctttgcagct taaataatgc agcgtatctg cattttatag
      721 agtggtggta cactttattt acatatcaag tgagtggcca gactgaatat gaagaaatat
      781 gtgaaggaaa ggatatggca cttttaatat ttcatatttg taagcaccct gcaggaaaag
      841 tgtaggcaga cagagatgtg agcggaactg tctgatttct gtgtgtgcat gtgtctccct
      901 gacaaaatct cttgcaaaac taacgtaata tatgcctttt ccggctcttg tgaacttctt
      961 cagcgcttct gaatacaaac ctgccaatca gacgttgatt ttccatttgt ttgggaagag
     1021 aatcaagccc acccttaaaa tctcatcctg tttcttcctg gggcttctgg gagatgtagt
     1081 cttgctctc
//
LOCUS       KCKM01000253             819 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4019apa ultra-conserved element locus
            uce-7841, sequence.
ACCESSION   KCKM01000253
VERSION     KCKM01000253.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 819)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 819)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..819
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4019apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>819
                     /note="ultra-conserved element locus uce-7841"
BASE COUNT          259 a          156 c          131 g          273 t
ORIGIN      
        1 tttttttttt tttttgcaac tcttactaga aacagtatta tttgctaaaa atgcagtagc
       61 tgccaaaagc tatgatccat ctaaagcaaa catgtttaag atggaaatag agtgttaatg
      121 ctgaaaaaga cagaattgag aatacaagtt ttcttttaca agttttgaag caactgcagt
      181 accgagttaa gtttgtcttt cagttgattg catttgtaga taagcaccta aatgagagag
      241 aactacatta agacaatagc agaagtaatc agatttcaaa ctttctaatt aaacctcttt
      301 ctcctgcaga aggttattgg gaattcaaca ctagccttgg ttcacatgat agaacaatgg
      361 gaaaattttc cgaatggttg aacgctaacc ctgacaagtg tggagagcca actacaatac
      421 attatatggt agcataacct gccacccacg ttgctgagag aacagctttc aaacacatgc
      481 accgagctgt aaaaccacaa aatcccttat tacacattgt cccttactta aggtgaaata
      541 cactatctcc atcccccttt ttatgaatct tggtgctttt taagccttca tctctgaagt
      601 ttatacagca gctacctaga ctgtttttca gaccccccta aatctcattt ttcctgtttt
      661 gttttctaac aaaaacaaaa taatgttttt atagtgcaca gtgatgtctt tcactgttgc
      721 tttttttttt aaatacttct tccacctgtg tgacattatc caacttctta aaaggagatg
      781 actaattgat ttgtgaagac ttatttctgg agtgaaata
//
LOCUS       KCKM01000254             999 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4033apa ultra-conserved element locus
            uce-3958, sequence.
ACCESSION   KCKM01000254
VERSION     KCKM01000254.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 999)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 999)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..999
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4033apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>999
                     /note="ultra-conserved element locus uce-3958"
BASE COUNT          256 a          251 c          220 g          272 t
ORIGIN      
        1 actttgcttt ctccagatgt ttgctttgca cacaaataat ctgcatgaag acagcaactg
       61 ctaattcgat ggccaaagtg catgaggacc ctaatctaaa acctcccaat ccatccagct
      121 gtctggcatt tgctattata gggcaccaac agagaaatga ggctgtggct ttatcactgc
      181 accctgggtg acaacttgat tttctgcttt caccgcaggc agcagcagcc caacatgatg
      241 gggctgttaa tttgtgcatt tcatggtgtc tgtcaggggg ctgggaaagg agggtttcag
      301 gggaagggaa tggagcatgt cccagcctcg gaagcacctg tctgcattga cggcacagag
      361 cacttcttat tagcgtgcag gtctctaaat gcagccccag gatgacagcc tggcattccc
      421 agcacccaca cagtgtgaca ggcgcaggca gccggtccca ttgtttgccc ttgatgagca
      481 tgtcattaat ggaaatggaa gaaagtgagg gccacatcag tattcaaata gcctccatcc
      541 tctctgccat tcaaccgcct ggctcaggcg gctgcagatt tccttctgca gctccactta
      601 cacattttca cagatttatt cccattgcat acaaatcccc tccacatggc tctggtccca
      661 tgtgccccta ctcccctcac atgcacaaac atgttcctca gcttcatttg atctgctaaa
      721 aataaagtga ggtttcttcc cttcctcccc atttggtgaa ttgctaaggt atcatcagca
      781 tatgcttgct atttgcaacc catgaaacgg aaggtggtac tatttaaacc tgaagcctca
      841 acaaggccct gatgtatcct tatttgcttc caagcaacta ctaatgctta tctgggtgac
      901 ttgtttcttt acaatagatt gcagtatatt tgttttggaa catttccgct ggtaagtatg
      961 gagtaagagg attgcaggca aaaggggaaa taactaaaa
//
LOCUS       KCKM01000255             984 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4049apa ultra-conserved element locus
            uce-1368, sequence.
ACCESSION   KCKM01000255
VERSION     KCKM01000255.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 984)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 984)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..984
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4049apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>984
                     /note="ultra-conserved element locus uce-1368"
BASE COUNT          364 a          168 c          193 g          259 t
ORIGIN      
        1 aaaaggaaac tcactttata aatagttctc ttatccagct atgcctaaaa taggactaac
       61 tccatccagt atcccaatta cataatacag tatattaaaa taagtctccc ttaatgttac
      121 gttgcagagg gtttggagtc caggaacaac cttgcaatag ggacagagtg accttttaaa
      181 aagaaaaatg aagtgaaata cactttcatt ttccagaaat atgcatgaaa gtaaaaactt
      241 gacagcacgg aagaacataa gcaaatatat ctttttattt gaagataaaa agaagcaggg
      301 gctagatagg gaaaggaaaa aacctgtgaa aaaaacggat gatgcagttt ttacgaataa
      361 gcagcttaat gtatcttggc acccacagta agccttgtag gagctcaaag tgcctcaggc
      421 aatctgtgag cagaatagca attttattac tttgtcatta aaccaatttc acagcagtat
      481 tgtttgttaa tgagcagcgg caaacgagcg aagatgtcac acactggaat agcagtgaga
      541 tttgtgaccc aagctcagag cactaagatg gaaagaccat ggctataaaa aaggaaatac
      601 tttgggatga aatgcaaagt ctatacagca gagcttgtgt ttatgagcta ccattttgct
      661 aagagctgtg agagaaataa aggtctggaa atatgcagtt aaaacagggc ctataaaatt
      721 aaaaccaaat taaagtatag cagaggatta ctgcacaggc tgtactctac aaaatatatt
      781 ttaagtgatg aggtgaaatc taaatcagtt ttgtttgaat gtagttggta tttataaaat
      841 tcagtaaagc gacgccaaat tcaaaaccaa agcagcagcc ccagtcctgg ggtctctgat
      901 ctataagctt cactttgaaa gaaacgcaac ttaccaccac ttaattagca acttgccctc
      961 tgtttatgag caaagatcat atat
//
LOCUS       KCKM01000256             660 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4065apa ultra-conserved element locus
            uce-5332, sequence.
ACCESSION   KCKM01000256
VERSION     KCKM01000256.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 660)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 660)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4065apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>660
                     /note="ultra-conserved element locus uce-5332"
BASE COUNT          171 a          127 c          118 g          244 t
ORIGIN      
        1 gtttcaagga taattatttt cattggacag gatttcctga tttattttat ttttgatatt
       61 tactttagtt aaaaggaatg taagttaagc actgtgaagg aatcctactg acaactgcag
      121 aactgtcact cgattagtct caattatgct gattccagaa tcaacttttg tagcgaagat
      181 gacagtttgc tgctggattg tttccattca cctccaactt tggctttggt tatgtgctgt
      241 tctggagacc cttttcctat cagtatctgt gacctgaccc tcttgagcta tattatatca
      301 ttccattttg acacctttta tcaaacttta atgaaatgac ccaggcaaac aaattgtcat
      361 taaactttcc atcactttgt cccttggtat cgtcttttat aaattggaca gcaaatgttg
      421 tattgatctt ctcgttcttg cagctgaact tgaaatgacc cagactgctt gttgtttatg
      481 gcctagagtt gcttttcctt gacatttcca tccacagcat gacatctctt ttgtttttct
      541 ttctttcttg tggagatgaa tgaacaagac atacggtatc gagacatcct cggtcatggc
      601 aatggaggca cagtctacaa gtgagtgttg aatttcattt acaatttttg aacggaaaat
//
LOCUS       KCKM01000257             992 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4080apa ultra-conserved element locus
            uce-4539, sequence.
ACCESSION   KCKM01000257
VERSION     KCKM01000257.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 992)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 992)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..992
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4080apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>992
                     /note="ultra-conserved element locus uce-4539"
BASE COUNT          326 a          192 c          163 g          311 t
ORIGIN      
        1 aatctggtcc tagctgcaac tgattcttca tcttaggaca atggatatga aacatcagaa
       61 ttttcattaa agataagttt ttcgctgctc ttacgccctc tatggtctat ggggtgtcac
      121 atgtaaaaaa agttcacaga ttatttttca tgttgtattt catagctgca tttgttagtg
      181 caaaaactca ttaaaattcc ctgcacatct catggacagc atgcacacag tctaaaaata
      241 atgaatacat ctacgagaat ttcataaaac cagtgaaagg aaaatgttgt ttctgtagtt
      301 gtggaaaatt cataagtatc tcatatacaa atgttttcta tattacttaa aaaataccct
      361 cacaaagtca taaagactag tgctcatatt tgctggtaag tcaatctttc tttcagacat
      421 caagagatga cctcttaaga cccaaagatt tatcaagtca gcagtttatt cccttaggcc
      481 accatcttca gcctcttcct cttccagtca cgtctatcga aggactttgc aaacccccat
      541 gaggaaatgg actaatctac ttctttctaa aggacaggaa tgatgcctat actgactgcg
      601 ctctatggga tgagaaagct aataaaggga aggagactac atctattcgt gaaagattca
      661 gtgtgatgtt tgtattataa gagacagagt tagactgctg tagctgtcag tcagaaaaca
      721 ggtattgctg cccagcatca gcaatcacta ctgataaatt tttgaggaaa ttcattcact
      781 cttttccttt ataagcataa aacatccctg aattgataga aaagtcaaag gattgtttgc
      841 atagaaagat tacaggcttt actctttcac ctctcttctc tcccctatag cagttgattc
      901 attaataggt acatacacat gacaatttaa agaagtgaaa acgttgaaca taaacccaca
      961 aattcctttg gaaaataatt attattcatt tg
//
LOCUS       KCKM01000258             535 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4109apa ultra-conserved element locus
            uce-4552, sequence.
ACCESSION   KCKM01000258
VERSION     KCKM01000258.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 535)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 535)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4109apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>535
                     /note="ultra-conserved element locus uce-4552"
BASE COUNT          160 a          104 c          112 g          159 t
ORIGIN      
        1 gcttgaaaac tccattttgg gccacagaga gtcatatttc agggagtatt gatcacagtg
       61 cagtttgtgt ttcctcacgt ccatgatcct gtttgcagcc ctgtaaaata ataacagtac
      121 tcatgtcagt aaggtaatta ccattgatct aacacactgt gacaaatttt tcagtcatgc
      181 cacttgattc atacttaaag ttatggcact gctgactgct ccttaaataa ttgaaggatg
      241 ccctttgtaa atcagcacac tcttgccaaa aagtggcatt cttctctgtt ccaggctttg
      301 tttcttagct tcatcaggga tttcaaaatt aaacagacag ctttccgtag cccgtatagt
      361 tcactcttgg agcaaatatc gtctgagctg gcaaatcact tatgacatct ttgttcaaca
      421 aaagcagggg aaaaaagagg aaaaggttaa gctacaggga agatcaatgt ttctgtggtg
      481 ggggcgattg gtacaaggtg ataatgacaa gagagacagc aaaatttggc taatt
//
LOCUS       KCKM01000259             876 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4124apa ultra-conserved element locus
            uce-2999, sequence.
ACCESSION   KCKM01000259
VERSION     KCKM01000259.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 876)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 876)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..876
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4124apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>876
                     /note="ultra-conserved element locus uce-2999"
BASE COUNT          250 a          163 c          158 g          305 t
ORIGIN      
        1 ttccaagatc tggcaaatat tgtcatcaat ctctttggag tagaacatgt gaattatttt
       61 tattgttcca tgtctttaat atccatattt ccttctctta tgccttgttt tacatgttta
      121 attcaaatag gacagagcaa atctattctg gctgaatgtc atacgcatat tgtatataat
      181 agaactatga ttaactgtat gaataattac cagttgcaac taaacaattc agatggatag
      241 tttcattaag aaaacaacat ggggtcatta caaggttctg gtcgctgccc ccagtcttag
      301 tagttctctg tactgccaat cggaactggt tataaaatat cccaagtagg ctcacattaa
      361 gctggataat atgcaggctg cttgatttgt attgaatatg tgtctggtgg ctggaaccca
      421 ctgtaatgaa ctagcccaca aatcacaact taatgggaat ctacttatac atattgctta
      481 attaaaagtt gtgagcttat taacatgtgt ctttggcact gagctttggg gatgtaatct
      541 ctgtgcaaat aaggctaggt tgtaaaagtt ttatagattg acaatgatat taaattccat
      601 accctaataa cccatcattt tctcaaagca tggttcctat caaagctgtg acacattatt
      661 tgtttgtcat cctttacagt gtgggacttt ctgtacttgt tttatctcag aaagagagtg
      721 ctactgctgt ttcatctact gctgtctaat tcttgaggtg ttcctagcta tgctggctgg
      781 catacagcct cagagacttc tttctttcat tacagaggca caacgtggca caacatcatt
      841 agttagaatt gtgccagtgt ttccattata aacctc
//
LOCUS       KCKM01000260             685 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4139apa ultra-conserved element locus
            uce-6282, sequence.
ACCESSION   KCKM01000260
VERSION     KCKM01000260.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 685)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 685)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4139apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>685
                     /note="ultra-conserved element locus uce-6282"
BASE COUNT          214 a          132 c          161 g          178 t
ORIGIN      
        1 gacagatggg gaggcagatg tacaacgcta cataaaagta gaaagactta tattatcttg
       61 tgcaaatgcc ttaagtgtct gagcgcaggc agcagggggc gggatgggaa acgaagggtt
      121 aagtgaaaaa tgactgtcat ttctctccct gctagcagct cttgcttccc cagactttta
      181 agaggagcca caagactgga gcgagagaat cactttgaga ttcttctgcg aagacaaaga
      241 aagagcgtgt gccgaggcgg gtagtcttcc ttccgtcact catggatgct ctgccaggat
      301 ttcccacctg agacagattg cgacgcatgt tcgaatcact catgcacgag aagcaataca
      361 caagttcagt gtaaagccac tttaaaagct catcgggtgc atactttact tgtacaaaat
      421 accttattca tgatggagca gtgagggcct aggtaattac ttgaatcaag gtggcctcag
      481 aagtgtttaa atctacaagg acacttagag catgaataat gcaaaataat ttgcatctaa
      541 attttttaag tgttctttat tcaaaaacta aaatgcagtt ccgattaaag tttgatgagt
      601 gaaagctgag cacttcatac ccactgtgaa acgtctccta tttgtggaaa ttatttcaga
      661 cagtggtaaa gggacaaaag agatc
//
LOCUS       KCKM01000261             708 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4154apa ultra-conserved element locus
            uce-7230, sequence.
ACCESSION   KCKM01000261
VERSION     KCKM01000261.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 708)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 708)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..708
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4154apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>708
                     /note="ultra-conserved element locus uce-7230"
BASE COUNT          230 a          118 c          169 g          191 t
ORIGIN      
        1 ttgggcttcg gctctgctgc ctgaccattg gaaccaaata acttcgaaga aaaagacctg
       61 tgtcatctgc aggcagtttt attaacatct gaagcacaca tttgtgccat gtaggaccgg
      121 agtccacgct agagcccttt cattaccctg ctacacggct ggatttatgg cggtggaagt
      181 cctagctaaa aaagcttttg tacaatgatt aattgacctt aacaagttta aggatgctta
      241 tttgcacaca gctatgaagt gttgcaatat gtcacaaatg agagcggctt ctattataaa
      301 cataatggca taaacagtga aagctggtta tatttcctta aaagttcatt gcagggaaat
      361 ggggaagctt gagaagctaa acaaatccag gcaataatgg aaatgtagca tgaaattact
      421 tctgtaaaca acagccattc attatttgaa catttttcat aagagagtaa gcagacgagt
      481 gttgatgtta aagggtgtgt gtggagaggg aggaggaagg ggggagatta tgaatttcga
      541 aagaaacctt ccagggctct acagacagac gtacgtctgt ttaaaaaaag aggtatgcaa
      601 agcactgatt gatccctgaa tattaacaat cgatgccatt ttcttcatta acttctgagt
      661 ggagcacaaa gaaaggtgta tttgatttaa ggggaagaga agggagca
//
LOCUS       KCKM01000262             635 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4170apa ultra-conserved element locus
            uce-2267, sequence.
ACCESSION   KCKM01000262
VERSION     KCKM01000262.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 635)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 635)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..635
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4170apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>635
                     /note="ultra-conserved element locus uce-2267"
BASE COUNT          188 a          104 c          110 g          233 t
ORIGIN      
        1 ttacctgttc tttcacagat ggggagaaag ctgcagcctg cctcagttaa gcatctttga
       61 caatgaatcc tgattttcca cttagatttg tcaccatgta gctttgtttg aaattggcca
      121 tttttaccct atttgtcgtt tctatttata aagatttatc gcagtatatc tgggttataa
      181 cagtatgtaa agactgatga tatggagtgg ccatatttgc atgtgtctgt ccccggaagg
      241 gtggactgtg attttattgg atgtctgcag ctattacctt gaaggataaa ttttcatttt
      301 tcatctattc ttccccatct agactgtatc aggattaact gtaattccag taagtgccta
      361 ttcaaacttt ttaaaatgtt attccaccat tttaaaatat gcaaactaga cgaaaaagat
      421 tgtggacagc ttgcaagcgc ttgataactt attaatgaaa tgttatgatt aattattgtt
      481 gtgtaaaaag tcatcatata cccttttttg tccttcccat aggatataac ttttaactag
      541 aatattaaaa aaggaagtat tctacaagtt gtagacatac ttagaggaaa tgatgcctat
      601 agtactacat aattttatac gggcttttat ttaca
//
LOCUS       KCKM01000263            1068 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4186apa ultra-conserved element locus
            uce-2397, sequence.
ACCESSION   KCKM01000263
VERSION     KCKM01000263.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1068)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1068)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4186apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1068
                     /note="ultra-conserved element locus uce-2397"
BASE COUNT          328 a          154 c          212 g          374 t
ORIGIN      
        1 ttcttaagaa aagtctgctt aagctgtctt tgtactgcat tcttagagtg cttttactaa
       61 gaaatgttac aggtattcag tttgtagcat tttgcacagc ttgtgttgga aatcttgaag
      121 ttcattcctc ttctttggct gcagatgaaa agctttaatt aaaataatgg gtttgaatta
      181 tgaaattact gtgctcaaga aagggatgta cccctttaaa ggcattagca taaagatagc
      241 acatttgttt attatgtttc aaaatcagct gctagtatct ctgccacagg taacaattga
      301 cttttcaggc ttcaagttaa tagccttgtc tcttgcttgt agggatcaat attagtatta
      361 attaatcacc attatcagcc ctaggatctg gttctatttg ttgttacatc agcaaaatat
      421 caatatagaa agtggactct ctgatcgtca tggcaacttc atctcttggg tcaaagaaag
      481 tttatcttat ctgtgcatgg agagtggtaa actgtttagg gatctagttt gaactctaag
      541 aacattgatt tagtttttgt ttgtgaatag aagctgaatt ccaatcacag gggataggta
      601 agttttaaat attaatgccc acaggcatat ctgagagggt gtcattacca ttactgttgc
      661 attgtctttt tgagatgaca cgatggtaga ggagaattgt gtagtccaga atatttacag
      721 tttagtcatt tgtacattgg acaaatggct tgtaaagtga aagcttggaa attctgtagg
      781 atttatgcag taatattact tcttccatgc aatgtatagt taggatttct tccactcagt
      841 taaagataag tgtataatta gcacagaaac atagaatttg aatcggtaga aggaacatat
      901 tttattacac attcgtcctt aagagatttt tcaaaggtgt ctgagaagtc aagagaaata
      961 tcagcgttcc attcactcaa gaattaatgg aaaatagaca tcatggaaaa tctaaaggct
     1021 gtagtctggt tacagttatt ttttgagttt tataagttga tgcaatta
//
LOCUS       KCKM01000264            1019 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4201apa ultra-conserved element locus
            uce-5453, sequence.
ACCESSION   KCKM01000264
VERSION     KCKM01000264.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1019)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1019)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1019
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4201apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1019
                     /note="ultra-conserved element locus uce-5453"
BASE COUNT          298 a          204 c          188 g          329 t
ORIGIN      
        1 gcaggaagaa tacattccca atgtgaatta gttggccagt ggaggatcca ggtaacaact
       61 ttcaggaatt tagcaaaaat tagggatttg ctttggtttt tttttcattt gaaaagatgt
      121 attcatggga ctgagtaaag gctcagatca agtgatactt taaaatatag ctcattgttt
      181 tctttgcaga taaagcgttt gttgatcttc tgttgggtac tgctctttat tttgttgcat
      241 tctcttgtgt gtcaccatat tgtgactaat aaaattaaaa gtaacctaat ataaaatatt
      301 catttagata catttactct gttacctcag tagctgttac atgatgtttc agaacaattt
      361 gaaaaaatac atgctcttat ttgttattct cctgctttat actgccagct gtactttcca
      421 cttcacaaga attcaggtct attccaattt tccacttccc tgcctttaat cccagtgtta
      481 caaatggaat cccatgctac gctaatatct cttactcact ggcacagaag agatcaatat
      541 ttcaaaatgc catatgtttt atagatcaac tgccttgtgc ataagaatcc aatgacgtct
      601 gaaccattgc gcagtatttg taagttacac aagccagggg ttgtgaagcc tctccctgca
      661 cgccatatca ggtcctaaaa tgcctgtact catctgtgaa aggttttagc atttccatgc
      721 aactcaacaa agttagtcaa atccttgatc tccttccacc ataaaccgct ctggtagaga
      781 ctttaataat gtgaatgttt tgtccttcac aggcatgcaa agaaattaag aaacttttag
      841 taaggtttca cagcagtcca gccaaattca gctgagtgtt agcgcttgtg ccagcagagg
      901 agaagtcaga gggtgaaaca cacaaaactg gcatgggctt catcactgag gttaattttg
      961 ccaactcctg cttgattcac ctgcagcatt cagaactagt ctaaggagga gttactgga
//
LOCUS       KCKM01000265             895 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4216apa ultra-conserved element locus
            uce-2358, sequence.
ACCESSION   KCKM01000265
VERSION     KCKM01000265.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 895)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 895)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..895
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4216apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>895
                     /note="ultra-conserved element locus uce-2358"
BASE COUNT          277 a          180 c          181 g          257 t
ORIGIN      
        1 aattgctttg tgtctttatc atctcactgg gcaaagcttc aatccagttc ttgtgggaaa
       61 tgtattctga gacaccgctc tctgaatacg agcccgtgca gtgatggcct cttaggcaaa
      121 agtggttgga ctataaagca cgggggtgtt ttttgcctca ggtggatttt gcttcttctt
      181 tcaggtgtcc tgaaaaatgg ctgatgatat tgatattgaa gcaatgcttg aagctcctta
      241 caagaaggtg agaaaaatgt gccagtgagg tcctgtttac cttgatttag cattattcat
      301 gaaactactg ctgaactgta aactaacatc cctggagccc tcatgattta tcttattgga
      361 gatgcattac atgtaactta caagtaatat atactgttaa tgtaattata ttgtgcagta
      421 gtttcacttc agcgtgatga ataaatgccc atctatctct ctttgtagac ttgcctaacg
      481 atatctcacc tctactccca tgaattcacc tttgattcca gtgtgaactg tcaatcataa
      541 ggtagtaatt gagtgacgta tcgctgtacc gtggtcccct aggtttaaaa aaaaaacaaa
      601 aaaaacaacc aaaaccccac ctaaaaccaa ccaacaaaac caaaacaaga catcccaaaa
      661 caagaaacaa aaaacctctc ctaaaattgc caggtccagt ttggtatagc aacaaggtga
      721 atgcagtggt ttgggaaaac agcagggttc caagaataac cttttcacca gtcccatggc
      781 aagtaaatat ttggacagtc tgctcagtgc aagaagagtg agacttgctt ttaatgcaga
      841 agactggtgg cggttaatct tttaacaggg cagatggaaa tctattgctg agtga
//
LOCUS       KCKM01000266             496 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4231apa ultra-conserved element locus
            uce-3675, sequence.
ACCESSION   KCKM01000266
VERSION     KCKM01000266.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 496)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 496)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4231apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>496
                     /note="ultra-conserved element locus uce-3675"
BASE COUNT          146 a           90 c           76 g          184 t
ORIGIN      
        1 tgtttctttc cctcttagca tttcatgctt tgtgtcattt gataatatac atgactaggt
       61 ttaatactca atcgtttccc aaatccaatt tgactaccta acagggttta atttacatga
      121 tgatacaatt tctcacacca gaaagcatag taacccttct tctttggagg ttaatggtga
      181 tctagcttaa agcccaaaag ataattacaa ggaatgtgct tcaggtgaca aagtactttt
      241 gacaatccca gactgttgat agctttttaa ttatacttct tcctaccata ggaaacagta
      301 tgttttctcc tacatagttt gaaggcattt ggggtttatt tatttatttc ccagtaaatt
      361 gctatgcact gtaatcaata ttttaactga ctgttacccc aggctctgct ctctttcttt
      421 cttttatttg gagagagatt aaaccttggg ttaatttttt ttccatataa aataaaagag
      481 catcaagaga agaata
//
LOCUS       KCKM01000267             729 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4245apa ultra-conserved element locus
            uce-2051, sequence.
ACCESSION   KCKM01000267
VERSION     KCKM01000267.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 729)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 729)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..729
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4245apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>729
                     /note="ultra-conserved element locus uce-2051"
BASE COUNT          225 a          132 c          127 g          245 t
ORIGIN      
        1 tttttaacca tactgtagat aacaatacaa cattggtggt ctttattgtc ttttggggga
       61 gggggaggct atttgcttga aagtggttct aaaaaataat aataggatta ttctcatctt
      121 tcatttagct taatagtaca ctacatacat ttgtcaatca aattagaatt actgtcagac
      181 tataataatg cattttagtt tagccaatat cagtcagacc tgatttattt gcttaataca
      241 aatctaattg actttcaggc tgcacttctc ttttcagctg ttaaccgacc aagtacatct
      301 ttaatttcca agaccgatgg tttggtagca gttgagagga agaatgattt gcataaggcc
      361 ccagaagggt gccaaaactc ttcacgcttt aaacaacagc ctttattatt ctgtaagtgg
      421 atgtgttgaa ttttcatgct tttatttcca gttcagccct gacagaaaga ataaagtaga
      481 ttttgccagc acccctgctg tgccctgagg gagaaattca atgtgcctca tttgtcttaa
      541 ttggagaacc gcccttagca ccagcttttt ctatgaatat attagcataa cagacagaaa
      601 agtctaagcc cactttttcg tagaagtata tttttttctt tctaagaaaa ataaaaactg
      661 ggaagaagaa aaacgcatgc atcatctccc agtcttctta ctattattgt tgttgtaaaa
      721 cacgatata
//
LOCUS       KCKM01000268             757 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4259apa ultra-conserved element locus
            uce-7141, sequence.
ACCESSION   KCKM01000268
VERSION     KCKM01000268.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 757)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 757)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..757
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4259apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>757
                     /note="ultra-conserved element locus uce-7141"
BASE COUNT          216 a          156 c          169 g          216 t
ORIGIN      
        1 atgtctagtt ttcagtataa attttatcca actgcaaaag gaaagtaact cattatcaag
       61 cagttcagta aggctccggc tactgaagga aataaagttt tacgacaaga gggtctctcc
      121 ttgtgagtga gaaagtgagt gcaagaataa gacagaaagg gaaggctcag gagtgctggg
      181 tgaattatag actgcctctc aagattcaca gctcttcgtg gtaggaggtt aatattctca
      241 catgtcatta ggtctgctgg ctctactgat ggctcattga atcaggcagc aaattatttc
      301 ctcatgctgc agaggacacc acacttcaaa gggaaggagc cagggtcaag acggctctcc
      361 agttcgatta atgagttggg atcagcagag gttgcctgta ggtaagaatg tgactgaagc
      421 ttttgacaaa gctgactttt tgaacaggac ttgacccagg ccccttattc ccctccccac
      481 caaattttat ttccaacatt tgcctcttac tgacctgctc aggcctgttg ggatagtttt
      541 gacctcctca gtctttgtta ccagacacag gagctgtctg cctatatttg atgtgtctct
      601 ccctatagac cacatcggct tatccaggct catcagaata ctttagaact gcacagcaaa
      661 ataagatgga gtagatgcat ttcaaatttt caattttctc attaaatttg ttgagaaagg
      721 ggaagaagat gactaccaga agatattttg gctttca
//
LOCUS       KCKM01000269            1102 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4274apa ultra-conserved element locus
            uce-1425, sequence.
ACCESSION   KCKM01000269
VERSION     KCKM01000269.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1102)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1102)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1102
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4274apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1102
                     /note="ultra-conserved element locus uce-1425"
BASE COUNT          344 a          176 c          214 g          368 t
ORIGIN      
        1 aaaaaaaaaa tgcagctatc agatattttg ttatctgacc acagggtatg aagtgttttt
       61 aattgttttt ccaattaact gtaagctccc aaattcaagt agaagcatat ttgtattttt
      121 cgtatgagat cccgtaccta accagtagat gagcatgttt gtgggactgt ataaggatta
      181 atgaaattaa aacagcctcc gctgctgctg attgaccact gatggtaaat gtaattgaat
      241 tagcagtgcg ctaaaataaa tgtagacaaa ataaatatag acaagaaaat ctggtgaaag
      301 cttctgtaat gttttatatt aataggcata cagaattctt cacatttttt attacgttgt
      361 ccctagatga attcaaagta attggggtgg ttaattttat ttacacagag ccgttcacag
      421 cgcattaaat aatagagata attgaacaag aattgtcaag tgtgtactga tatcagacat
      481 attacagaag ggaatgtgca taaaacttca tttctatgca gccattgttt atggtaatta
      541 agtacacaga tttatccctt ggttgccttc caagcttatg gcaactgcta ttgttgtgct
      601 ccattaatat gtaatcagga aatagtttaa ttttctaatc tgcagtttga gaattcactt
      661 tctaacaact cttaattact gcattgccct aatgatgctc atggttagga aaactgaacc
      721 aataaactcc gtggaagaag ccagagggga ttatacttcc agaggtggtg cttacttaat
      781 aaacttgtta tgccttcacc agagggagct cagtgtcctt caaaagcaac taattttata
      841 tttcagagtt gtacataccc acggtgtgaa gagttaatgt acgacgtgcg gggggtggct
      901 gtaaatttga ttcactagag aaccagataa gcgatactat caccatttta gtatttttcc
      961 tggtgtatac taattgtgga gtttaattgc acaggaaata atgcaggtgg tttaatctgt
     1021 tgttttaaac tgtcctcgtg ggcttatttt tgtcaagttt gttttctttc attagccaca
     1081 ttagctaaac gcagtatcgt aa
//
LOCUS       KCKM01000270             487 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4290apa ultra-conserved element locus
            uce-373, sequence.
ACCESSION   KCKM01000270
VERSION     KCKM01000270.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 487)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 487)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4290apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>487
                     /note="ultra-conserved element locus uce-373"
BASE COUNT          162 a           95 c           89 g          141 t
ORIGIN      
        1 tttagatttt aatattgatc tcctctgttt tggaataatt aatcattctg catgaaactg
       61 tatctgtgtg actccgcgtt atacgatgat cagaagttta gcatcttcct cacaacggtg
      121 ccgtgattaa atttatattt tgacctactc ctaaaggcaa tttagctgtt ccaacagaag
      181 ggggaaaagg ggataccgcc actttaaaag cttcaatctc tttgacattg ctggcagtgt
      241 atgggaacat taatgcatct gtcatgataa caagctaaga ataacatcta gacatcaaac
      301 cgagcagaga atccatctga agtgattcat tcagatctgt ctcattgatt tattaaacac
      361 agggcaacat ctgcagcctc acagagccgc ttggcaaaat taatgcaaga tcaattcaaa
      421 tggaaaaaag tgcaaaagag ataaatcaaa acacaatttg catgcagttc cacaatcagg
      481 cttattg
//
LOCUS       KCKM01000271             950 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4305apa ultra-conserved element locus
            uce-5315, sequence.
ACCESSION   KCKM01000271
VERSION     KCKM01000271.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 950)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 950)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..950
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4305apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>950
                     /note="ultra-conserved element locus uce-5315"
BASE COUNT          299 a          179 c          191 g          281 t
ORIGIN      
        1 tcacaagaat ggcagaaatt ttgcagattt gatggtgttt tctttcctgc caatgtcaga
       61 gaaaaaaaaa agaaagaaaa gcaataaaaa catagaacca tttcattcta ttcatatact
      121 gtggaataaa cgttcacttc atataaatca gtaaaatcag tggagttttg ttgacttgcc
      181 ccagctgaga atttcttcca gtgtatttat aagtaaaatc acacaaacac attatgtgga
      241 tggggttata tgtgaaaatc aatattaaat tcatcatagt tagctgctac agaccacagt
      301 gaacacttac tctctaatgg ttaaatgccc tttggatctg aagccctttg atttattgga
      361 agaaacctgc tgggcagaac acactgtgga gctgattaat gtcagcttct gtcatcagtt
      421 tccacttaga ttcttggcca gctctgacat ctcctccctt aaggatccag aagaatttga
      481 ggactgatcc aagagcttta ctggcatggg atttgcagaa tgtggtgctt gcaaaataag
      541 gaagatgaat ggaagtaaaa ttccatgttc tctactggac ttgtttcttt aactcatttc
      601 tctggagaaa gagaccaatg ccaggaccac accagcaaga gaaacaaatc aatagcatgt
      661 tcactggttt tgttacagat gtcttgcatt tcctttgctg ctttatatgc tccctcgtag
      721 cctgtcaaac tggaaaatga ctgcagtgag aatgcagagc taccatagct gtccagattt
      781 acactcagca ttgcacaagg agacttacga actacaaacc ggttggtagt gcctaccatt
      841 ttagagagga taagctctta tctgaacagg gctaataaaa agtggcaacc attgtgattt
      901 gcaggttgat tgtttatgag tagcatagct tttttaacgg tagaacacga
//
LOCUS       KCKM01000272             803 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4320apa ultra-conserved element locus
            uce-6894, sequence.
ACCESSION   KCKM01000272
VERSION     KCKM01000272.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 803)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 803)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..803
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4320apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>803
                     /note="ultra-conserved element locus uce-6894"
BASE COUNT          280 a          165 c          137 g          221 t
ORIGIN      
        1 ccaacttaaa aatgaacgac tgcaacacca acctggtagg ggcgacccaa aacacgtgaa
       61 atgatagcac ctcatcgcca caaacttgcc cacgattaca ccaaggacaa atagctgctt
      121 cttacttttt ggcacgctgg gtatttatta aataagggca agaaaattat agttgtccct
      181 tttcaatatt tacatttaaa aaatgagaat gcctttaaaa cacacaaaac atgaatgcaa
      241 ggactggtgt gatagcagag aaccttattg cacataatta acagacacat aatgtctggt
      301 tactagtaat ttccttctag ctgagtaagg aaataattta atcatgttga tcaaatgaat
      361 cccatgagcc cagcgtaaca ttatgctttt cttttccccc ctctctaaat ctgcattaac
      421 tgataagagt ctacttggtg aaaccaagga acccaacctt gtttaggtat ccttaataat
      481 acctaaaata caggcatgat tttagtaatt ggtttcatcg agcctttcag taaaaccttt
      541 tctaatttgt ggtgctgact gcaaggaaaa aaagcaggga aaaggaagaa agaaataacc
      601 tagggtgttc ttcacttgga atagaagcaa agtatttttt aaaactgcaa atcccgcaac
      661 gaggaaggtg tttctataaa gacacgcaga acataaaatt aagcacctta aatactcgag
      721 tgtttagcag ctaatggtga attcctatta ttctcctccc ttcaccccca aaatatctcc
      781 aggtacaact cagaaatatg cag
//
LOCUS       KCKM01000273            1050 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4336apa ultra-conserved element locus
            uce-4431, sequence.
ACCESSION   KCKM01000273
VERSION     KCKM01000273.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1050)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1050)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1050
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4336apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1050
                     /note="ultra-conserved element locus uce-4431"
BASE COUNT          293 a          185 c          196 g          376 t
ORIGIN      
        1 agaaccaaga attgtgattg ctcacacagg tggattttac tgttttgttc attaaatatt
       61 taggtacctt tgaaaaggta aaggtgatta atatggccat tgtgttccac tgtgaggggt
      121 gccagtggct gctttgctta ccagtaattt ttcaaatcta atctaccttc tgttataaaa
      181 atgtttattt ggtggataat ttttaattgg caatattttt actgaacagg aatatttaaa
      241 gttacataat aacaagtgct ctgaactgtc gtagtgaagc ttctggggta aagaagctta
      301 aaattgggac actgtacatg taatttacat tgacttaaaa aaatgtattt ctcgatagag
      361 actttttaaa tatttatctc tgaataatta ataatgtatg actttttctt gtgtttaaaa
      421 tctttccaaa ctacaacatg cctatcaatt tccatttcga acatgcaatt ggtcactttt
      481 tcgccttgat tcatcttgcc tggctgccaa ccaaattttg cctccgtgta ccttcttgac
      541 actaataatg actgagtttc tgttcgtttg cgtgcaagat ttcccaagcg gcagtttggg
      601 gctgggataa actatctatc atgattgcgt acaactaatc tgcctcaacc aaaccaccca
      661 atgattgaaa ttgcatttga caatcacctc tccttggcgt gcctgaggtg aacatagcta
      721 cagaccatcc ccggaagggc atagcaactc ctccatatgt tggggaggat ccttttattt
      781 gtgtcaagag acttttagca aggcatgtat aggcagagat tatgtttttt ttcttagact
      841 tccttatttt cagatgcatg gctgccgctt tctcttcacc aaagcatttt ggttttgtga
      901 agcattttct gattttttta ttcattaaaa cggttaagct ctttctctga aataaaccag
      961 tgtgatattg gatgtattgg agataaaaaa ttcaagagat atttaaaacg tcgtgtattg
     1021 tttgttagaa cgttctgctg ttgatagacc
//
LOCUS       KCKM01000274             569 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4352apa ultra-conserved element locus
            uce-7067, sequence.
ACCESSION   KCKM01000274
VERSION     KCKM01000274.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 569)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 569)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4352apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>569
                     /note="ultra-conserved element locus uce-7067"
BASE COUNT          194 a           89 c          101 g          185 t
ORIGIN      
        1 tttccttatg acctcagaca tgtctgtgag ctgaatcaga atcacatgaa taagcatttc
       61 agattagcac tgtactcaaa taaaactaag tttgcaaaaa gatcttgggg aaaaaaataa
      121 ttggagacat catagtggat ttgattaaag tgaatattct ttgagcttta tagtcaccaa
      181 atctcacata tggaaattac agttggtctt aatctgcttt cagaagactg gttcaaatat
      241 taaaaagtaa tgaactaaca agattgtttg ttaatgccac ataaaagtgc taattatact
      301 ttattttctg cctgcagcta aacccaagag acattgccta agaaattgtt aaataagttg
      361 cttcacttga aatgtgaata gctctgcagt gcttgatgga tttacattta aggagttgtc
      421 tgtcacataa tgcttttgaa aatgtggcaa agaagtacta tgaagaagct tgtttagtgc
      481 acaaaaagta tattgtattt gtgattccta ctacctcatg aagaggaaag agcttcactc
      541 ttaattgcac tttccctgca atttcagta
//
LOCUS       KCKM01000275             547 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4366apa ultra-conserved element locus
            uce-3400, sequence.
ACCESSION   KCKM01000275
VERSION     KCKM01000275.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 547)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 547)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4366apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>547
                     /note="ultra-conserved element locus uce-3400"
BASE COUNT          140 a          136 c          109 g          162 t
ORIGIN      
        1 ttttttcccg cagcctgata attttcaaag ctattggcaa cctgggaatt ttcctgcctt
       61 atcgccaggg ctcagctaac ttcactaaca ctaatcagag ctggaatcat tcattcaagg
      121 attgcatgat catgtttttc tttagcggtg acagctgccg gggccatatt agcaatgcag
      181 atgagtcagc ctaataggtt aatgcagaac acgcgaaaat taggtttaat ccccagcgaa
      241 ataatctaac attttcacat ttcttgatgt tgggatagag acattggtgg cgactcaatt
      301 aggtgtaatg tagatcaaag caaatttacc ttctggctga accttccccg tagtttagac
      361 agaagaatat aagggttcct ctgctaattg cccgacggct gcgggcagcg tgctcctcgg
      421 ataccgaccg gctttgccaa cacccgggca catcgttttt agcattttcc acacggcccc
      481 gtccaactca cgactctttt caacgcaacc cttacaaata aagacgcttc tttttttctt
      541 tctttct
//
LOCUS       KCKM01000276             878 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4381apa ultra-conserved element locus
            uce-1845, sequence.
ACCESSION   KCKM01000276
VERSION     KCKM01000276.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 878)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 878)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..878
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4381apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>878
                     /note="ultra-conserved element locus uce-1845"
BASE COUNT          318 a          161 c          150 g          249 t
ORIGIN      
        1 aaatccaaaa tgtgaatgcc caatctgagg aaatttgtaa ttcagactac aggtttgagt
       61 ccgggctggt ttatactaag tgcagctcag tagctctgat cctatctgac tgtgtttgga
      121 ttccctaatc ccagagaaag gcattcttat gaagttaatc agctgttgac gcagaatgct
      181 gatgacagtt tccccatatc tgcttcatct aaagaaaacc cagttagtgg taattctacc
      241 aaatacttgt aacattcaca tgaaacttta attgattttg aaacagtaca actgtgccat
      301 gaattcaacc acacagaata taagccttga gcccactagg tttaagcaat tgtgactttg
      361 tagactagaa gtatgtaaaa taaaatctga taactccctg gtgttagagg tagacagttt
      421 tctttcaaat cctaggtttg gtcctttatt ttattcagca gtgaaagcca tgaatacaga
      481 acgaataaca gctgttacaa ttctcaacca tgacttctaa cgtcagagaa ttcaaggtat
      541 gaacacagta cacagtaatg aaaagtatca aaaattagtt tacctcaaaa aagataaata
      601 aaacaggtat atcccaccaa tacataaaca gatgtttgtg ctacagttaa aatttgctgt
      661 atacaaaaga tcataatccc cgacctcagc ttatgataga agcaagaata catgagccat
      721 ttaaattgtc agacattatg ctttataagg tatgcacaga agttcaagca ataaatacat
      781 acattagttc aaagccttac aatagctacg caaagcagat gcagaaaagc agatttgcta
      841 ttactagcaa gcaatgatat aagagtaaaa attcatga
//
LOCUS       KCKM01000277            1043 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4396apa ultra-conserved element locus
            uce-2936, sequence.
ACCESSION   KCKM01000277
VERSION     KCKM01000277.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1043)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1043)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1043
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4396apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1043
                     /note="ultra-conserved element locus uce-2936"
BASE COUNT          355 a          187 c          177 g          324 t
ORIGIN      
        1 atacctcaaa aaatatttca atacttcact gtttccccag aaacttagtt ggtaccttgg
       61 ataagagttt ggtgaactca gcacttgtct tgttttcttt tgctgcctag aaaccagtaa
      121 ctctcatatt cataagcctc caaagccatg tacagattct gtagagtaac tacttaaaaa
      181 agatacgtac cattttgtct cctctgtcca tagttgctct taataaacaa tgatttatag
      241 tgcttccagc aaagtcagtg acccagagag aacatcataa gtgaaaaaca aggatacaaa
      301 aaatgaaatt gattgaaaca aggaaggaaa gaatcaaatt gattgatatt agtagtaatt
      361 attaaaaccc cacatctcta gtcaactaac agatgcttct tgttgcacac taacctgtat
      421 atcttttggt acataatact aatctatgtt ttctttatct gatgcattag aaaaccctag
      481 gagagaagat ccaagacaca atggtagggc acagtgggtt aggtccacgt gacctgctct
      541 cgcctgaaag cggcagcctg gtaaggcagc tggaggtcag gatcaaagag ctgaaagggt
      601 ggctgagaga tacagagctt ttcatcttca attcctgtct gagacaagaa aatgaaggaa
      661 caatgaatgc tgagaaacaa ctgcaatatt ttaaggtaat aaaaaaacaa tcatagtttt
      721 cagagagaaa ctctttatgg tgggataaaa taattatctt gtacataacc taatgcagtg
      781 catgtgcata tataatcata tattaatatt tttaccctca tttaggtact gtgtgttcat
      841 tcatattgat tttatttatt ccttagactt tttgaaaaga gagagttaga ggactaatcc
      901 tatcgcaaat gcaaacccaa tagttttctt tcattctact tcactataaa actgagtttt
      961 ctcataaaaa tcctcactct gaatttcagt tcctacatca gttaaattaa ttaatatgtt
     1021 gtgtgaccat cagctattaa ata
//
LOCUS       KCKM01000278             809 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4411apa ultra-conserved element locus
            uce-6934, sequence.
ACCESSION   KCKM01000278
VERSION     KCKM01000278.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 809)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 809)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..809
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4411apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>809
                     /note="ultra-conserved element locus uce-6934"
BASE COUNT          237 a          133 c          165 g          274 t
ORIGIN      
        1 ttttaataga gtcactttat gaacataagt gtatgtagct tttattttaa tcttttttat
       61 tccaagtaac taaagccagt cagcttctgt gcatttacaa acatgtttat ggttttgtta
      121 gaaacttaaa agtcctgtat taatagtact gtataaaagt attgtatttt cttccttatt
      181 aaggatgagt tctcttgact gactgagcct aaactgcttg ctaaaacatt gcttttaagc
      241 tagttacagg tcccattgtt gtaagctgga agcatagaac gtattgcacc catcacattt
      301 tccccgtcaa tcagatctga gtgtacaggc tattgataaa tgtgctgatt tgggagaggt
      361 ctgtctggtc tgttcattta gatgatgagg taaccgtggg gaagttctat gccaccttcc
      421 tgatacagga ctactttagg aaattcaaga aacgcaaaga acaaggactg gtggggaaat
      481 atcctgcgaa gaataccacg attgctctgc aggtgatttt gtttttacat ttttaactaa
      541 ccattttgtg agcttacttg aaatagcagg tagatgaata ctgatgattg tgcagtgctg
      601 caaggatttt atttagctgg gacacttttg gcctttgttc atcagaaaag taaaacgtaa
      661 tccagctata ctgtctgttc caaggtaagt gcgaaaaatt attctctgtg gataactcgc
      721 acggtagcaa cggttataaa attccttagc aagtctagtt gatacatctc aatctgaagt
      781 tgctgatgta aagtgagata aatgaactt
//
LOCUS       KCKM01000279             610 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4427apa ultra-conserved element locus
            uce-6204, sequence.
ACCESSION   KCKM01000279
VERSION     KCKM01000279.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 610)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 610)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..610
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4427apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>610
                     /note="ultra-conserved element locus uce-6204"
BASE COUNT          171 a          108 c          120 g          211 t
ORIGIN      
        1 gcgatttaca cttatttaat ttctaaacgg gaacgtctgg gtttatttcc gatttacaaa
       61 gaaggtttat ggcgcagctt aaaactaagg tttttgttat tgttgttttg caatgtgtgg
      121 gaaatacttt tatgttcaca cagttcgcct catgaatagg gataataggt tcgagatcct
      181 cattgaaatt tgaagttttt aaacagaaat tccctaactt ttgctcgttt tctcaacttt
      241 tttcgtagga acaatgccaa cattgaagcc ctcggttgga gtctgcacag ttggagatct
      301 ttggtgccgt tttagacatc tttggatttc atcaatcaaa ctgactgcaa ttttccataa
      361 aacccctgaa tttgggtcag aaagtgggca aagcagataa agatcgttcg agctgtctta
      421 taagatgata aatagatatc ctttcagtcc aacaatgcaa gaagtgcagt tttgtaattc
      481 acttccattg gttttgaatg cagtgagtcg aaacaattta tacatgtttt cccatggtta
      541 gaagatgtct ttacatactt gtcaatagta acttgacctt tttccccact gagctacgaa
      601 gaggtgcctt
//
LOCUS       KCKM01000280             910 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4456apa ultra-conserved element locus
            uce-2901, sequence.
ACCESSION   KCKM01000280
VERSION     KCKM01000280.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 910)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 910)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..910
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4456apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>910
                     /note="ultra-conserved element locus uce-2901"
BASE COUNT          269 a          158 c          210 g          273 t
ORIGIN      
        1 ttggctggct taaagtagca tgagtgaaat tgtagcatga tacatgcaat agttttggta
       61 aacttgatga ggagttgcac atatattcct aaaataatgt atggcatcta ttgtgcatat
      121 atatgtgtgt atgagcaggt atgatatatg tggataaaat agaatggctg cactgagaaa
      181 taccctgcat caaaatgtat gaaatatgta aaagcatgta caggtgcacg ttctttgtat
      241 cacgtcccat ttccatacac agtacgtgtg tacatgtgtg cacacgtgtg cccatgtgca
      301 tacatgtatc tctatgttga tgtgctcccc agtgtgtagt ttatagtttg gagagaaatc
      361 atcctccatc attcgtcact gccgagctgc ggcagaccag gccggcacat catttgttaa
      421 cagcgacaaa gccgcactca taaacgccga catgttacat taatttatag gcactgagtg
      481 acttattaaa tgtgacgtgt gaaatataac agggcccggt atggatgatt aggttttggg
      541 ctttgaattg ttgacaaggc aggggtaatg aattgcggga cacaagctag tatgtttccc
      601 cctcattagt cagtattagc tgcattaata gtaataattg gatatattca tcatttaaaa
      661 tgtttcaata aatgtttgga cagcacctga tctaggctgt caaatactag actggaaggt
      721 ttgtgatggg agaaaaatta cgccgttcct tctgcagaga tttatacagc ctaaggggtg
      781 ccatttgcca acgtccttta agaagtgatg ggtggagata gtttggaaaa agacaagtgc
      841 aacaagagag aaaccagcct ctcttgcatt tcaggaagat atttccattt cattctagag
      901 acttcgtggt
//
LOCUS       KCKM01000281             232 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4472apa ultra-conserved element locus
            uce-4483, sequence.
ACCESSION   KCKM01000281
VERSION     KCKM01000281.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 232)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 232)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4472apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>232
                     /note="ultra-conserved element locus uce-4483"
BASE COUNT           91 a           36 c           29 g           76 t
ORIGIN      
        1 aattctgtag tacaattaca tgaatttact tttaataaat taccatcttt gcatatatca
       61 gtcaaaccat gaagactaaa cacttgcaaa taaaatgcat tattaattta attgtcacag
      121 cctatttagc tagcttctat tagtatttgc tataatatgc actgtatcag aggggggaat
      181 caaattcaaa acataaagaa taaactgatt atattgtccc agagaaatca aa
//
LOCUS       KCKM01000282             867 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4486apa ultra-conserved element locus
            uce-6440, sequence.
ACCESSION   KCKM01000282
VERSION     KCKM01000282.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 867)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 867)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..867
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4486apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>867
                     /note="ultra-conserved element locus uce-6440"
BASE COUNT          240 a          152 c          219 g          256 t
ORIGIN      
        1 tccaaggtcc ctgttttcat ttttcttagg gatagcggga gctctagcaa tatctgtctt
       61 tttaaggcct gcagtgagag agcgagagac tgagcaggag gatgtgggga gaagggtaaa
      121 atatactagg tgagtatctg acccttgaat accttatgtc atctctgaga accacaacct
      181 tttcaagaat cacagttgtg gcttctgtgg caaaggatga caacaaaacc caccacaatt
      241 attattcaga tttgaggcct gggttttaaa acaaatgcat ttggagcaga gatgtggaaa
      301 ggaggagaaa cacaagtgtt gcttactggg ggccctgcag acagaaaatt attgtgttcc
      361 taacgctatt gattttttgc agcagctgat atttcaatct gggtgcagca tgtctgagag
      421 actacgcaca ctgtcaagaa gaaatatgat agtgtcttaa aagattaata atatctctgg
      481 tcctcaggag gcctgtctta attcactggc ctgttccttg gcatgtactg taatttatct
      541 agtctgattt gaatagcaaa tggcaatcgg ctgccattag ggaaataggc atcagtctta
      601 ttgatccagg atgggctggt ttttatttaa ggagagctgc aaaatgttat taacttccgg
      661 atgagaggct ggaggtgcag aatttttttg cagtgttcca agggaggggt gaattacact
      721 gaagcttcaa agtcctgaaa taggtagtaa gaggggagac ttggggagaa ggcaactgct
      781 accactttgt ttccaaaggc accagttgtt tccagcacaa ttgttctctt tcttgggctc
      841 tttgtgtaac tatgtcaatg gtgtact
//
LOCUS       KCKM01000283             343 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4501apa ultra-conserved element locus
            uce-1126, sequence.
ACCESSION   KCKM01000283
VERSION     KCKM01000283.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 343)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 343)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4501apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>343
                     /note="ultra-conserved element locus uce-1126"
BASE COUNT          121 a           64 c           39 g          119 t
ORIGIN      
        1 cttttgcaga atatatatat aaaatataca tatataaaaa aatcagcaca cttcaatcca
       61 aaaggggtta cagcaacgag cttaactctc tgtatacttt ttttctttaa caggatactt
      121 tagtataact tttgttaact cagtagtaca agctatctct gttctacatt tttatagcta
      181 caagagtgaa atataaccta caacatttac atttcacata tcttggtata caaacagtac
      241 tgattgaatt tgagccaagg accaaaagac tctttaaaaa ttatttcacc atctgataga
      301 gcttcctgtc atttacactc agtttattct gcaatcttct aaa
//
LOCUS       KCKM01000284             452 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4516apa ultra-conserved element locus
            uce-2802, sequence.
ACCESSION   KCKM01000284
VERSION     KCKM01000284.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 452)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 452)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4516apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>452
                     /note="ultra-conserved element locus uce-2802"
BASE COUNT          132 a           72 c           94 g          154 t
ORIGIN      
        1 ttgccactga agttattttc agaacatcat atggattttt cattgaaaca tctgtgttaa
       61 cttttatcat ccttgctctg ctttgtaatt ttggaaacag atataaagaa tgagcaaccc
      121 agagcacagt aatatagtgg gaagcatcct tcataagtca attgaggaat ttaataatct
      181 ctttagaaat aagctctgca gctatgagaa aaatgtgtgg gttaaaggcc ttccaattaa
      241 gaaaggtttc tctgtggatt tataggctgg tggttagctc ttcctgttcg tgtttccatg
      301 gcaactgtca ggtagatttt ctgctacttg ctaggaagtt ggaaatgttg agtctggttg
      361 agcctttcaa ttcactgaag cttaaatgaa attctttgca aggaactggc atttagcctg
      421 ggtcatttat tcatatctag aagagaaatc aa
//
LOCUS       KCKM01000285             771 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4532apa ultra-conserved element locus
            uce-6859, sequence.
ACCESSION   KCKM01000285
VERSION     KCKM01000285.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 771)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 771)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..771
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4532apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>771
                     /note="ultra-conserved element locus uce-6859"
BASE COUNT          199 a          157 c          156 g          259 t
ORIGIN      
        1 gtcttggctg tggcgtgttt agccttgtta ttagcagcgt acatgaccac acaggtaatt
       61 tgtgtacacc ttaaacaggg tagatctaaa ccccaataac tatgcatata ggtagtcagg
      121 aaaaaaaaaa gaataaaaaa agtcagagtt tgttttcagt gtgtctgtct aaccttcata
      181 tttggtagac agtttatgtg gctccctaga ttgatctcca ccctccctcc ctatactcct
      241 tgtttagtta attcaacaaa gactttttgc aatctgtttg gagtttgtct gatgccgtgg
      301 aaaagtagct gctgatttat ttggttgctt ttcgatttct gtctctagcc cgtcttttct
      361 cctcctttca gcggggatgt cagctgttat tacttcctat tgatcccttt gcaaagtgag
      421 aagtgaacta aaattaatgt caattccact gctcggatca atagctggag ttattttaat
      481 ctggatttgc gcgaggtgct aaattaaaaa aaatcagcat agaggcagaa aagtagcagt
      541 tcctcactcc acctgtgccc actgcattcc cggcacccaa atgttccctc cagctgatta
      601 ccctgcaatc catatttttt taattaagaa ggtcagatag ttttcttatt ttggggttct
      661 gtatttaaac ctatgacatt ttgacattgg gagtgtatta acgatagatt ttcataatga
      721 ctggtccacc gcagtctaat ctgtccatgt tgctgagggt ggggagctgc t
//
LOCUS       KCKM01000286             909 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4547apa ultra-conserved element locus
            uce-1392, sequence.
ACCESSION   KCKM01000286
VERSION     KCKM01000286.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 909)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 909)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..909
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4547apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>909
                     /note="ultra-conserved element locus uce-1392"
BASE COUNT          270 a          151 c          161 g          327 t
ORIGIN      
        1 ttgtgttgat atgtatgagt aattcccatt aatggtgatg ggagttacgc atgtgcactg
       61 acagaagaat agacccctta gtgttcaaag cacatgaaat ttacattttt tccattgctg
      121 taattgagat gttgacaaat tggagaatat tgatgagcct ttgttttaag tatttcttgc
      181 caagtttgct ttattttttc atggtttgaa caatggtgtg ggttcagcag caatgaataa
      241 taagggtaga gtaaagataa ctttgtattt caatattttg atgtgccaat atgaaataaa
      301 ttgtcttagg caaatggaat atgctgtttt aatcattagc tatgcatgaa agaaaaattg
      361 atgttgacat ctttgctgta aaatcgttgt aatggggcct tccttacaat tcatttttgt
      421 aaaattcatt ttgtacattt tgcagcaatt gaacaatccc cgcactgtga ataggcagaa
      481 ttcccagaaa tactgagaca gttggcccag taactgctga gctcacactg cacaccacat
      541 gcacattaac cataatgatg ccagaaccag cttagctaaa tatagtcaca tttaatatcc
      601 tcccatccct tcttttcttt ttgtctattg catgaaaaaa tacatttttt gcagtttttg
      661 tttgattgtt ggagtctgtg aacatttatg tccctacccg ctattcaata agtagcatta
      721 aaatttcata gtgaatcttc gctttgctat acagttttct aataatcagg ctagtggcaa
      781 ctgcagattc ctcacctttt attaaattaa agcttagaat ggggagagga atttgaaata
      841 ttatacttgc attcaagatt ctcacctcac tttcagcttt taattcatgt aagtttttct
      901 atctggata
//
LOCUS       KCKM01000287             542 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4563apa ultra-conserved element locus
            uce-5361, sequence.
ACCESSION   KCKM01000287
VERSION     KCKM01000287.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 542)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 542)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4563apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>542
                     /note="ultra-conserved element locus uce-5361"
BASE COUNT          120 a          146 c           98 g          178 t
ORIGIN      
        1 gatcctcact gatttttctt tttttttttt tccatccccc tccaggtttg cagcaaagac
       61 tgtgcacagt gggtcgctga tgctagtcac agtggagctg aaggaaagct ctacagcaca
      121 gctcatcata aacaccgaga aaaccgtgat tggttctgtt ctgctgcggg agctgaagcc
      181 tgtcctgtcc caggggtaac ctgcttacat ctggacttca gaatctggca cacaacaaaa
      241 gtgcctggca tccactactg ctgcctttca tttataataa tagcccttcc atctggcagt
      301 gggggaagaa tacactcttg acattcttgt cttctgcttt agaatgctag tgtgtatcta
      361 tcatgtatgc aagtccattt cttttttttt ctgcttgcta accaaagaac atacatttta
      421 ctgtcagatt tctgcacgtt taaatgtata tcccatttgt cctaccccag tccttccctc
      481 tctgctccct tcccctgcta tctttcttcc ccatcagttt tccccactgt actagtggac
      541 aa
//
LOCUS       KCKM01000288             945 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4579apa ultra-conserved element locus
            uce-6379, sequence.
ACCESSION   KCKM01000288
VERSION     KCKM01000288.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 945)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 945)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..945
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4579apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>945
                     /note="ultra-conserved element locus uce-6379"
BASE COUNT          328 a          193 c          107 g          317 t
ORIGIN      
        1 tactaatatt tttttaattt aattaacttc caataaagct gcttatactg gaaacaataa
       61 aactctttct accatgtcac tcctgcttct ttaacacaca tacaaaacac acagaagcct
      121 caagaaagct ccaggcattc taagaaaaga aataaccaaa taccaccaaa tatttaattt
      181 tctatgccgg aaatgagaaa caggtgtaat taaaataaca ctttttaaat taagtgacct
      241 ctcttgacca accatctgtg aataattcag atttttttcc cattattact gtaaaattaa
      301 aactagggca tataaatgac gagatcctct ttaactatct ttaagcacca gcaatatata
      361 ttttccacca gttaaaatcc ttaatgatac caaaaatctg tcaagcataa ctcccccaat
      421 tcatttgcct gaaaccatca atattttatc atgcatttgc agttggcttt aatttaacag
      481 tccaggttac taatcaaaca aaacacccaa gtcattaaaa gttagcatgc catttagaaa
      541 gtgcatttca cgtttattaa aatatctttc atggagccat tagaaggcta aagttttaat
      601 tacaatcaga tatttagttc tacttcagtt atgcttttgg cactctcttg caactgcctt
      661 gattaatctt ccagacagag ctcatccatt accttctcaa attattttcc tcttaacttc
      721 ttcataattc atcttttttc ttcccccctc caaacatgta aaatgcatta aaaaggtgtg
      781 cacaatacct gcctgaaaga tgtcattaga aagattccat ttcaaatgca atttattctc
      841 aaaagtacca aatagccata attcaaatag atgtactgaa attgaaatgt aggttttctt
      901 gtctttgttg tcattttaac tattttccta cagatgagag actaa
//
LOCUS       KCKM01000289             950 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4595apa ultra-conserved element locus
            uce-6997, sequence.
ACCESSION   KCKM01000289
VERSION     KCKM01000289.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 950)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 950)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..950
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4595apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>950
                     /note="ultra-conserved element locus uce-6997"
BASE COUNT          318 a          155 c          174 g          303 t
ORIGIN      
        1 aaataatagt gtaaaaatat ttggtttttt acagcaggag ggagaaatta aaccctctta
       61 tattaggtct ccttagccag gacgccaatg ataatgactg cagagaagca attttagtac
      121 ttcccaatga ttacaggttt ataattccat aattatttaa tgctcgctag atatatctac
      181 ttaaatatgc ttcttctgat gcaagatctc ttgctaagct aatttggagt gactccttgc
      241 caaatcaata tcaatctcct ggcaaatatt attaaatatt tgtttgatac ctatttacaa
      301 gtaggaaaat aattttgctg ccaagggatt gtaaatgtgt gaaaagaccc tctgacagct
      361 tacttcactc actgcctaca agccggcgtc tgcatgccaa agttggaaga ctaagatgaa
      421 gaacataatt aaggaaacat atgaaggcta gcacagggtt tcagattaat tagctgtgag
      481 tcaataatct catcaatatc cgattaacaa atgacacatt gcccaatgaa acatattgat
      541 tcattcacac tccacactgt taataaattg aagctgcttt gctaaatgag aaagctgaca
      601 aaataatagc ttcctaatac ttctccagtg ttgtgataaa aacataaaat tagcccaaag
      661 tatacttaat ttagcagcac tgtcatgcac ttctgacgct tgttagcaca acagtgtgga
      721 agatttttta atagcctaat tattagaatg gatactttaa tacatggatg tatacaaaag
      781 tggaaatgaa tatgttatct gtttgtttgg agcagggttc ttggataaat gcattgtgga
      841 agaagtgaca tcaacctttt gtattacgtt gggagtggag ttttaacgag ctttttgtgt
      901 agtatggtaa aaagctagta tctgagactg gtgtccaaaa tctaaatttt
//
LOCUS       KCKM01000290             999 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4611apa ultra-conserved element locus
            uce-1342, sequence.
ACCESSION   KCKM01000290
VERSION     KCKM01000290.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 999)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 999)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..999
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4611apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>999
                     /note="ultra-conserved element locus uce-1342"
BASE COUNT          310 a          181 c          180 g          328 t
ORIGIN      
        1 aaaaccatta aaagatttga atgcaaaacc tggaatgctt tccttttaaa tttcctagct
       61 tgtttcttgt ctctctttct gacaccatta ttgatataag gaatccatca acatattttt
      121 atggatgatt aagaagggct gacctttcct ttgcaggtac aaataggtag ttcttcagag
      181 gctgtaaatg aatgacaaga taattctatc catttaatat tgaagtgatg ttgatagtat
      241 cattcttctc ttgtttgaaa cgggaaagta tagagacctt tctccctcac tctgctctgc
      301 tttatgtgat ggattttctc tctgactaat cgctgtcaca ttaacctgca ctatttcatc
      361 cttcagagct gtcaagataa tgacgataat cgaagtggct cattgtaggt aaaggaaatt
      421 atatgagcaa agtaatatca taaaacagtg tttaaatatt ttaatttcat ttgtcagggc
      481 tgccccaaca cttcattaca catataacca tctctcatca gtggaattag tgcattattc
      541 attactgtta attattttca cataatggct gccctgatat atttaacctc cacattatat
      601 ctcagataat gggcctgtaa aattgaattg tgtgaagagc ggagttctaa agctcatttg
      661 cagaacatca aagaacaaag aagaggaaaa gaattctaaa tgggacattt cacccagctg
      721 gggccaaaca tttgtttctg tctgatttgc atacagaaaa taggtggttc agaagtggct
      781 taacttcgta catgctgtct gctcctatta catagccaat tagaatttgt taatgtcctg
      841 agtgtttgag acaatttacc agctaatcta ttgtctgaat ggcagtgagc tggaaagtta
      901 acagcagaag aaagtagacc tttctgaagg acaggccaca aaatcatatg gcatattaag
      961 gcatcagcta agttcatcct tctttcgaca aatgtctgt
//
LOCUS       KCKM01000291             626 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4627apa ultra-conserved element locus
            uce-4349, sequence.
ACCESSION   KCKM01000291
VERSION     KCKM01000291.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 626)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 626)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..626
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4627apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>626
                     /note="ultra-conserved element locus uce-4349"
BASE COUNT          159 a          198 c          151 g          118 t
ORIGIN      
        1 aaatctgcca gttgtcacca tttccagttt tggacaaaat aaaattatca agcggcacca
       61 gcagaagggc tctcccgaaa cagctgaata cagcaagctg gctccaatta agggaaataa
      121 aaccgccgcg gtgctggcag ggttaatcaa gcagctccag accctgggat ttcacaaaaa
      181 ggcaacctct ctcctccttc aagaactgta aacacttgtg cccgagcagc gctgggcatt
      241 cgctaaggca gctggtgtgc gagggctcac cagttcacgc tcggaggcgt taacacttcc
      301 cccagcagca gccctaagcc gggctgccaa ggtcaacggc gcagatggac taattgtatt
      361 atgagcttga catctagtgg ccacccctgg cagggccaag caggcaaagg ttaaatcagc
      421 aaagccttgt caaagcccct cctaactacc caccctcccg cagcagcagg gggaagctcg
      481 cctggcgttc ccgaggctct catgcattcc cgaaaacccc aaccttctac caggcacccc
      541 accccaggat ccaccccagc caccagctcc tggaaggggt tggcagcctc cccacagttt
      601 gggaaatgtg gcagcgcttc ttcttt
//
LOCUS       KCKM01000292            1071 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4642apa ultra-conserved element locus
            uce-70, sequence.
ACCESSION   KCKM01000292
VERSION     KCKM01000292.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1071)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1071)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1071
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4642apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1071
                     /note="ultra-conserved element locus uce-70"
BASE COUNT          328 a          228 c          200 g          315 t
ORIGIN      
        1 ttttgttctt tagaaggtgc attatctttc tctcctgttc cacctgacta aattggtggt
       61 atctcttcta tcacctgact gagtggttgg ctggaaataa tgggacaaaa caatccacta
      121 ttgttacaag agacaatgac ctttcatgtc cttggagctc gccatgacct ttcatctttc
      181 ctatcctcca gtggtctctc ctaacaacta aaactacacc ctcttaggct gaattccaga
      241 ttgtcataaa aagccccgtc ctttcgaaac aaaaccaatt tttacaccaa ggtggaggag
      301 aaacacaggt ccattgttcc tgcacagatg gaagttagag ttactaaggc aacagctcta
      361 atcccccttt ttaccacctt tttcacatca ttggcctatc aagtgtgcta ccttttaact
      421 cataagctca aaagctggta gtctaactga ctgccctaat tagctacgat tttcacagta
      481 cagacaacat gatgagctaa tcgaaatttg caaaataatg acgtacctcc agcaaatatt
      541 cctcctcctg aggcccagtc ttagaataac aataatgaga ccattattag aggagggcat
      601 taaaatgctg cactgctgct aaacagagaa cttaattgtt ctggtcttgt ccattgaatc
      661 aacaacctat tgttgtggac ttgaaaaata aaggactgga gaatgggtgc cataatgatt
      721 ggtctgtgct gccataccag cactctgtag aattgttttc cttttgaaac tcttgatgga
      781 ctagtggttt tgtttaaaag taatataaaa ggcaattgtc tggataaaaa gtcctattta
      841 ttgaaatctt tagaagcagt tgcatggatt tgttcatgac ccccaagata aaaacatagg
      901 gaccataata atgctatttg tagagaccac tgcttgcagt gacactagat aaggctgccc
      961 tgtctagcta ctgcaaaaac gaggaaggca tttcctttgc agacagaaat catgacagaa
     1021 ggtcaaatag tggacagacc caattcatct gtaaaaagga agatgcttta t
//
LOCUS       KCKM01000293             440 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4656apa ultra-conserved element locus
            uce-2231, sequence.
ACCESSION   KCKM01000293
VERSION     KCKM01000293.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 440)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 440)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4656apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>440
                     /note="ultra-conserved element locus uce-2231"
BASE COUNT          146 a           73 c           89 g          132 t
ORIGIN      
        1 atcctataaa ctggaatcag aaataaattg aaagatttat aaattggagg tgcaattctt
       61 cagctacatt ggtttaaaga tggtgaaatg agtgactaaa gcattcactc acagtgtttt
      121 atgaagcaga tctaatgtgc aggttttgtg acctgcagtg actttaactt ctcagtaaat
      181 caaaaagctt aacaaatatt aagatggcaa agattacctg tgtgtgccag attttatctt
      241 ttatccgtta tcatttagga aatgaaaagc ttgagtcgga aatcagacag ccagtcacgt
      301 ggctcaggcg gtctggcagc cccacaagac aagaacctgc aggagacaca gaaactacac
      361 atacactgat tagtttttag tccttaagaa atggctcttt ttattgttgt tattattatt
      421 agcaagcaag gagctttaga
//
LOCUS       KCKM01000294             850 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4671apa ultra-conserved element locus
            uce-4736, sequence.
ACCESSION   KCKM01000294
VERSION     KCKM01000294.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 850)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 850)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..850
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4671apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>850
                     /note="ultra-conserved element locus uce-4736"
BASE COUNT          260 a          125 c          175 g          290 t
ORIGIN      
        1 tacagttctg tgttgggata tttcaagcat tcatgacaaa aaccttaggt aaagacttta
       61 gttttgcgtc aagtctattc ccttcttgaa tttgagattt tagggtcagt ttaccctgtg
      121 ccttgtaaat acagtccccc ttctaatgct attgtataat acaatcactt aggcgtcctc
      181 actagtgtct gagagtgtta gggtcactta gtacttagtt taatgtttga ttttaacgta
      241 taaattaaag aactgtgtct gtctgtgctt agatgtaact acataggtgg agagcaagtt
      301 tatgaaaatg ttatttgctt ctcctttgag aagccttgtg ctttaaaatc ttgctgtaaa
      361 aacacttaaa aggttattac aggtagagtt gtcagagaaa atggacattg ttttttggta
      421 ttaaaatcat gtattccaga tgtgggcatt tgttagtcac tctgctctaa aatgacatac
      481 tgttgaatct ttaaagggct tcagtttggg aaagcaaaat atgattgggc aaattgctaa
      541 aatatttaaa gtgcagcctg ttaaagcttt tactgcgaag agcatcacgt cagaagttgt
      601 atgtggtaaa agcaagtaat tggctttccg tacttatgcc agtcagtcag catggggctc
      661 tgttcctatc tattctactt cattgcagat gctaatagca actttgatat ttattttgga
      721 ggggtggaac tggaaagaaa aaaaaaactt ttatggatgt gagggtgtca gaaagccctg
      781 tttaaaatta aatgtttatt gctgcagaaa gaatatagaa agtgtttgaa acatacccaa
      841 aattaaaaaa
//
LOCUS       KCKM01000295            1036 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4685apa ultra-conserved element locus
            uce-620, sequence.
ACCESSION   KCKM01000295
VERSION     KCKM01000295.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1036)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1036)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1036
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4685apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1036
                     /note="ultra-conserved element locus uce-620"
BASE COUNT          286 a          195 c          239 g          316 t
ORIGIN      
        1 aagagttatg ggatttaatt aaattggtgg tctgctggct ttttccagtc agaagttaca
       61 cgtaagctgt ctcctgtatc cctccctctt cctctttctc ctgttctctt acagaaggtt
      121 ttggtaggca tgtacattca tttcagaatc taatcataga caacttaaat ctttccaatg
      181 ttacccacat tagtaattgc aaaataataa acatgacaaa attcagatta atagggcatc
      241 cggcacaact cggatggcgg ggagagccct ctggaattct aagcgtaata ggtctgtgtt
      301 tatttctcaa ccgatggcat aatgtgactg atttacaaga gtttaactca agtgttaatc
      361 tgacagtgac gaagagcttc tcagtggcag aatcacttac actatcatat tagttgcctc
      421 ctctattaaa gcagtatggt cgataattgg aatgctttta tgtctagtgg ttctgacaag
      481 gctctcttta ggtcacatat gggcggtctg gcttgctgca cagctgaaca gtggcaaatg
      541 atttaaactg agaaagtatt gttctcctcg tattatggag caagggcagt tcaaggaaag
      601 taaggctctg caccggctac ctgctggtgt gtagtaaaat aagatggaca tgatactggg
      661 ttgggagtac aattaaatct attttgcacc gatgtgttgg tggacagatg agtttccaca
      721 tggcagagct ttatgatctt taaggtagac tgaactaata gattggtgtg gagcgcactg
      781 aagttactaa ggatgagaaa gcaagcagca gtacatttga actacaggtt tctcatatgc
      841 tccacgtcat gctgagtttt tatagctcct ggctttcaaa aagcctgttt caaagaggtt
      901 tgcgctagac tgggcatgca gttttgctct gcagatattg tcgctaccga tttagtggaa
      961 tgcaattagg aagcctaaat taagtggtaa tggagaacca gctcttgaaa ctggggtttc
     1021 cacggcaacc actgct
//
LOCUS       KCKM01000296             899 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4714apa ultra-conserved element locus
            uce-2250, sequence.
ACCESSION   KCKM01000296
VERSION     KCKM01000296.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 899)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 899)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..899
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4714apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>899
                     /note="ultra-conserved element locus uce-2250"
BASE COUNT          244 a          173 c          182 g          300 t
ORIGIN      
        1 ttccgtggga gcttctcatg aggatttaca cccagggctt gtcccagcct ggtgcgtgat
       61 gcagctctga agaaaggcag atttggtttt tggtttggcg ttaaagcgaa tctacggcca
      121 catgaagtct gaaaatggca tctccctgcg ttctcgtgct gcagttgtgg aggcctgttc
      181 cttttacctt tcccagacta cattccttct cttatttctc ctgttttatt tttcagaaca
      241 gtaatggctg gactaagttc gaaataccaa atttccacct attatcgttg cagtttaaac
      301 aagactgacc agtgattgct gttcacttgt ttcctttgac cctggctatc gcttgcctgc
      361 ctcataaaat ctgttatgca caaaagtgca taaaatgaag ataaagtacc tccttcaagg
      421 ctgacaaaaa ccattccttt gcagaatggt agctgcagtg aaagtaaata aatgaatgga
      481 cagcaatcac agcctagttg atgaaactgt tcaattaaag cacaggcatt tacatggtgt
      541 aatttcccta aattgccaat gagccccttt agacacaacc agtgttcaaa ttgatttcag
      601 cattgatttt ggctgaagct gataaatttc tgcttgttag ttaaagtaat tttgcagaag
      661 actttgtact gcagtattga agtgttcatt tagctgatgg ttaaaagagg agttatttac
      721 agagggttct actgttgttc tgagatggga caattccccg gtcatctttt tacttttaat
      781 ttttaagctc cagtatacaa tcaataggtt attgaaactg attaaaatgt atccagccag
      841 ctgcctatgg ctgtttaatt agaaactgga tgattcttaa attaaagttg ttttgtttg
//
LOCUS       KCKM01000297             770 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4730apa ultra-conserved element locus
            uce-1920, sequence.
ACCESSION   KCKM01000297
VERSION     KCKM01000297.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 770)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 770)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..770
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4730apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>770
                     /note="ultra-conserved element locus uce-1920"
BASE COUNT          206 a          145 c          147 g          272 t
ORIGIN      
        1 tactttcgtg tttcgagata cagagttcac cctagagcgc tgaatttcca ttcatgagca
       61 tagtacatac ataattaatg caatctgctg tctgttatga ctagagatga cagaaattta
      121 tgtgacagct accaaatatg tatatatttg gctgttgtgt atatggcagt taataggttt
      181 gactgtatct ggcattgata atatgccacc agtgtggcga agttaaacct atcccacgtc
      241 tttcaggcct ggtgtgtggt agggctatcc aatttgaata gctcctttat gtcctttctc
      301 aaaccaaacg tttttatttt tgtcaataaa ctgtgtcatt tattatagtt aagaaaactc
      361 atgttgtttg aggtctttat cagagttccg acaaatcagg ttaattggtg atcaacagag
      421 cttttctgcc tttaatgagg cctggtagcc caaggcaagg cccagctctt gataagggac
      481 tttccctttc cttattcagg actctttgat cacttttttt ttactgggag aacaaccgcc
      541 gggaatgtca ttgtttttta attgcctgat taccaaatgt tggagataaa agatagatgt
      601 tctcaattaa taacatttac atagattagc atcactaaca agcctcatta gtagctgctg
      661 acttttgttt agactgcgtc ccatgtcagt tgtgctctga tagcgcactg gtaagtatgt
      721 tccccatatt aaaatatatt tctttctaat ctatttccat tagtcgagct
//
LOCUS       KCKM01000298            1081 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4745apa ultra-conserved element locus
            uce-4076, sequence.
ACCESSION   KCKM01000298
VERSION     KCKM01000298.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1081)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1081)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1081
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4745apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1081
                     /note="ultra-conserved element locus uce-4076"
BASE COUNT          319 a          214 c          191 g          357 t
ORIGIN      
        1 ttccttcact ttgcatttca actctcttgt gtaatgtagg tctctgattt cacatggcac
       61 tttgctaatt actagatcct tccttataca gcctgcctgc tgtagctgcc tcacaagaag
      121 tgtttttcct gtctgataag atgctgattc tgtgtgtata ggttgtctct aacatataga
      181 tcacaaactt cctccctgtg gttgatatta aagaagaaga agagctatag aaaatgcatt
      241 tatttgtttt taactttttt attaatgagc attcaaaagc atttgtgttg ccacatccca
      301 gccatgctaa tcattagtat tttgttaaga ttaaaggccc tctttcttag ttttcatatc
      361 ccccagcctg gctccttaca atctccgtta atataaaaaa gcaagtggca atagattgat
      421 tacacacagg ctcttattat taagcagaac agaaaagaaa ggaatttcaa aatataatcc
      481 tccgttccca ggagtatttg tcttgttctc catgaagtta aaggtctgaa ataatgtgcc
      541 catcaggagc tcaatgttgc atgtccatgc cagttggtcc aagggcttgt tatgatggta
      601 atgacctgct gaaacgtgag ctttgatggc aacaatacaa ttgctaccag ctcacccgct
      661 gggagaaata ttttattatt gtcaaatgcc ctccgcagag atttgttttg cctgttcctg
      721 tttaaattaa attcagagca gaactgcatt attatttctc cagagtatat ttgaaataaa
      781 caactagtcc ccaaatttag gattcctggt tagtttaaat tttcttatta gcagaaaaat
      841 tacaataggt gacaacatag ctgcaggaat attattgtgg cagccataca agagatttac
      901 acattgagag catggcctaa aagcacaaga actcccttct actttacaaa tgccagccaa
      961 attaataatt aaccgtgcca taaattctcc agccttcaag aatgatgtca gtgctcttct
     1021 gtgtcacact ggaggaattt tgtcataaga ctaagtggtg ttctttataa agtgcgttac
     1081 t
//
LOCUS       KCKM01000299             980 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4761apa ultra-conserved element locus
            uce-3776, sequence.
ACCESSION   KCKM01000299
VERSION     KCKM01000299.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 980)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 980)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..980
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4761apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>980
                     /note="ultra-conserved element locus uce-3776"
BASE COUNT          321 a          212 c          183 g          264 t
ORIGIN      
        1 tggagacaga aataagcatg caacttttat agtactgaat ggtaagcaat gttacatgca
       61 aaacatagcc acacggatgc atgaaattga tcttataaag agttacaaac aaaatagtcc
      121 aaaataataa ccaataaaca catgcttggg tggaaacttc caattataaa attactataa
      181 agatcctcaa actgttcagg ggaggaaaaa agtccaattt tccgcataac ctgagagcgc
      241 agagttttct gataagaaga tccaagaaac ctgtaaaccc aaggctctaa ttttcttatg
      301 gtgactgtgt aatattttgc aaagtaaaat tgactgagat ggaagctatt ttgcatggta
      361 cagtggcgat ggctaacaaa tgagagtttt gtgggctgaa tgttagtccc ctgcctcatc
      421 tgccacccct aatgacagca gccacctgct gttttattgt cacagctgga gccggttcac
      481 actccttggt gctgagctct gcccatgagc gccaagctct cgcctcgcct cattactttg
      541 atgaactttt tatggtcagc acccatgaag acctcatcta ggactataca acctagatcg
      601 gcttcaggga gtgcttccag ctagcatgag gtgataatac acagtgacac cacggctgct
      661 actgcctgtc acttagtcaa ggcactgtac tgcacttcta gctctacagg gccctcaaca
      721 ggtaaaatgc catgaaattc tcctatgtaa taaagttttc atgttgcaat atagaggtca
      781 tatcctacta gcaaaaatta gtttttccaa gactgatatt aaaattgcat catgctgttt
      841 actagatata actacagaca agaaatttct atgttcccta gacataaact tgctgccttc
      901 ctaaaaaaat atcctggcac taaagaaagc aaccatgaaa accatattac ggcttgatta
      961 acaccaccaa ataggaaaaa
//
LOCUS       KCKM01000300             522 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4791apa ultra-conserved element locus
            uce-154, sequence.
ACCESSION   KCKM01000300
VERSION     KCKM01000300.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 522)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 522)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4791apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>522
                     /note="ultra-conserved element locus uce-154"
BASE COUNT          158 a           72 c           81 g          211 t
ORIGIN      
        1 tatggagttc tgaactgcaa cttgactaag aagcccctgg gtacaacagg tcctcttgtg
       61 gccttttctg atgtgagact tgaactagtc gatttttttg aaggctaacc taacctcgac
      121 tatttgttgt tatgtgcaat actgtttgta ctgtttgtat aaaaaaaaaa gaaaaatgaa
      181 aagaaaaaag gcataaatct ttattgcaga tttattttca ttgcagactt tagacattgt
      241 gattcactaa aatcattttt ctactgtcaa atatgtacct tttcttcatg ctggtatttt
      301 ttcaatagta atgtagcctt tgtactgaga caaattttca ttgttatttt tagaaagatt
      361 ttttgctaag aaaaaaatta aacatattta catatttttc atttttattt cgtattttct
      421 ttaaggagtg ctttctcaac cattaatata gttgtttctg ggagagactt tcatatctgg
      481 tcaatgtcat taatattatt ttgtattttt acttggaata aa
//
LOCUS       KCKM01000301            1012 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4805apa ultra-conserved element locus
            uce-3387, sequence.
ACCESSION   KCKM01000301
VERSION     KCKM01000301.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1012)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1012)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4805apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1012
                     /note="ultra-conserved element locus uce-3387"
BASE COUNT          309 a          207 c          170 g          326 t
ORIGIN      
        1 gcaaatcaac gccagagatg ctgcacagca tatttttatt gagacaatcc tatacatgtc
       61 tgaaaaatga acttgtaata aactcatatc ctgtggaggt atgtttttcc ttccatctta
      121 tgagctaatt atgccaacat aacataacgt tttcctaaat gccttataaa ctgacccagt
      181 tactcagaaa gtattatttt taaattgatg tgatagatgc aaactggaat gttcggattt
      241 caattctggc accaattccc ggatcccctt cccaagtaat ttaaggactt cctcccgata
      301 gtttttcata ttcttttaac tgacatttta tctttataca gtatctcagc agaatgaaca
      361 tgcactaaaa caatgacagc ccttctttgg ctgtcatctc tcattctggc aaagacagat
      421 gtcttacact ggcttatgcc aataatagag ccgacaaaaa acaacagaga ctacctgcct
      481 ctgatgtaaa ggcaccaatt cacatttgtg acactcattt gtcaattaac agatttcttc
      541 cattgttgac acatgggact taaaagatgt gggctagaat gtgatgaatt aaaaaagaca
      601 gatgagtaag ctatgagctg caaagtaata ctataatgtg ctttagatag gaatatcaac
      661 tgacacccct gacaggccat acaaggtttt atttcatttt gctctgtatc taggcttcat
      721 actttgtctt ctttgttctc ttttcatcaa gctcctaaca tctcattctg acagccagag
      781 acttttaagg cactttcgtt tcaaatgcaa gttagcgtac ttgatttgtc attaaaatgc
      841 aaaacgattg ccattgcagg taaatgtagg tatgcttaaa aggttgtatc tgcaaagtaa
      901 aagctgaaaa tggtttctgg ctgctttgct taactctttc accagcctca gagtttttct
      961 aaggcaaatc ttaccatgct ctaacagaag cgtagcagca cttgcagttt ta
//
LOCUS       KCKM01000302             702 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4821apa ultra-conserved element locus
            uce-3631, sequence.
ACCESSION   KCKM01000302
VERSION     KCKM01000302.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 702)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 702)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4821apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>702
                     /note="ultra-conserved element locus uce-3631"
BASE COUNT          220 a          139 c          130 g          213 t
ORIGIN      
        1 gtcctctgga gagaaaacta tacttctgcc atgtcagaaa agaacaaagg gcagactaaa
       61 agctgaccag agggaacaga ataacagcta caaaaaacaa caattaaaaa caaataaatt
      121 tgaaagcctt ctgtagcaaa tattgagctc ttggctttct gaaaagaaat tccctcgtga
      181 agcaactgac tggagggaga tgcaaaaatc ctgactgact tggcggttgt gtctcacctc
      241 atttcacttt cttttttttc tcctttctaa acagaccgag tgttagtctg ctgagaatat
      301 gatgctaagc cacttttcct gtagagtttt taaactgggc ctctgagaaa gggtttgata
      361 caattcaatg actgaagtaa tacctttgtc catctgagca ttaaatggcc cattgaaata
      421 cagcttagtt agaaagaatt tcagtaaatg gtgctttcta attttttttt tattattatt
      481 attcctctcc caacagatta cagcctggat ctgaaaatgc agttcaatca cttttggttg
      541 cctctcaggt caggccttca gccagtgtta attaaatata acccctttag aatactggag
      601 gttaaatgag agcaacaaac tggtcatctt caaaatatta cctcatgctc tccaaaaagc
      661 tgtaatctgt ttgggagggt cctcatttaa gcacactggt ct
//
LOCUS       KCKM01000303             942 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4837apa ultra-conserved element locus
            uce-2226, sequence.
ACCESSION   KCKM01000303
VERSION     KCKM01000303.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 942)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 942)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..942
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4837apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>942
                     /note="ultra-conserved element locus uce-2226"
BASE COUNT          290 a          203 c          139 g          310 t
ORIGIN      
        1 gcctccccaa acatagtttt ccctatcgac tgcttatttt caaatacttc acatggaaat
       61 aaatgaagta catttatctc ctgtgcatat aggaaacggg ttttgtacat gtatgtcttt
      121 acatccatat agaaatttct aacatgacaa aatactatgc tcaaatacac atagaaagac
      181 tcttactaaa aaaagatggt ccctattttt agtacctcca ggtttcagtt gttttttact
      241 cttaataaat ttcaaaatgt ccctacctct gttcagaagg tattagggca tttaaaggca
      301 tttaggttta gtattgtttt taattggtat gtttatgatc aggaagaaga taaactgtga
      361 aaaggcaaaa cattagtgct cctactgaga cctctactaa cctctcttcc tgagagcacc
      421 tctactaaat accctggagc aaagtctagg atcacttaca ttccagcaac tctcactggg
      481 aattatccaa ttaaagcagc aattccccca cccccttttc cctcataggt ctaaatacac
      541 aacaaaatat attgcaaaaa tcaactgctc cgtattttaa taatcttggc ttctcaatga
      601 agaaaagaat ggaagataaa aacacctcga atatttcatg tccacatgaa tcatacatcc
      661 tgttttcatc ttctgttttt gttcctccga agagacaaga ttattaaaat gtcattgtgc
      721 atagagtatt ccttaagaga tcattactgt taaacaagga actagcctct cgtctccctc
      781 catttttaat caatcactgt ttttcattat tggactctcc cacagatctt cctaaattta
      841 tggtaaagag tttgccgagg ttcacttctg agtagccact catggacaga catttgtcta
      901 cggtactctt cagtcttttg taggcttcag agacttcgtt cc
//
LOCUS       KCKM01000304             413 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4853apa ultra-conserved element locus
            uce-6033, sequence.
ACCESSION   KCKM01000304
VERSION     KCKM01000304.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 413)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 413)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4853apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>413
                     /note="ultra-conserved element locus uce-6033"
BASE COUNT          115 a          103 c           85 g          110 t
ORIGIN      
        1 accccgcgga gccagcgcct ctgtccgcca gcgcacggca agataaatgt ccacctccca
       61 gcctggattt aagcagggga aggccaataa aaggttgtta tttccgctcg cccgctttat
      121 ctaaaacagc cagacaaaac aaatgaaaag gcttttgtag aaaatcttaa ttgtggctgg
      181 acagttgtaa actcattaaa ggccgaattc cagacagttt gcagacccgt catttattac
      241 acactcttaa tgctgattct ttgaagttgc ctctgtctgc aacaacagag ggcgtcccag
      301 catccccaaa tactggctca gggatcaatt aggggctttt tgtgtatgca caccagaacg
      361 agttcccttt cgctaattag aactcatcaa atattatggc agatttcttt ttt
//
LOCUS       KCKM01000305             884 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4869apa ultra-conserved element locus
            uce-205, sequence.
ACCESSION   KCKM01000305
VERSION     KCKM01000305.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 884)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 884)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..884
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4869apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>884
                     /note="ultra-conserved element locus uce-205"
BASE COUNT          276 a          150 c          163 g          295 t
ORIGIN      
        1 gttttcttta attgtattca tcatcttctc gcacaatttt agccaagtct ccaaaataaa
       61 caaaaaagtt gtctccatcc ctgatggatc agatctctaa gtccacagcc cgaagtgact
      121 tctgtgtgca tgaggggcaa ggaattcttg aggatctcaa taaaagttac aatttctctt
      181 tgatgggtgg gggttggaaa ggaaagggaa tgtgtgacca ttcatcacag ctccagactc
      241 attagtaccc aggaactttc tactctaaat gacaaagagt ttcactgtag ccaaagagaa
      301 attgctgctg accttagacc tctttttgga aagtaaaata atggagcaca ggagcagagt
      361 ctgatatttg accgaattct acacaattat catgcatgtg tatataataa aattaattct
      421 gtgtctttgc attttagcct ccggcaagca gcgtacaatc agttttgtat gtataataga
      481 tcacagagtt gttcatgaat aatacaaatg cattgagcag atactagtga gcgaggatgt
      541 ttgtctttgc atggaatcaa agtgaacatg taatattgtg ataatatata tttgatgaat
      601 tcaggtctga cttgcctttg ccatagcctg ctaattcccc gacaagggtt gccacaataa
      661 ttgagtttcc aataacatta tgattatttc cacatgataa tttaattgta ggtatttttt
      721 taatatcgta ataatgtaga tttgtgatta ttatgcattt gcatgcagat tttcatggtg
      781 tcttggagca catccctaca tttataactt aatttcctat attattgcat atatatattt
      841 tgggacgaac tcattaatgc acactaaaaa aaaagtaagt cttt
//
LOCUS       KCKM01000306             913 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4885apa ultra-conserved element locus
            uce-2981, sequence.
ACCESSION   KCKM01000306
VERSION     KCKM01000306.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 913)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 913)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..913
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4885apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>913
                     /note="ultra-conserved element locus uce-2981"
BASE COUNT          245 a          200 c          215 g          253 t
ORIGIN      
        1 catgcaaaac ttcaactaag ctaccagatg tgtgttcctg tgtcactggg tacgtgcacg
       61 ctgcttatct tcccggtgat ggaaactgct ggcatgtaat tgttagtatg agccatgcaa
      121 ggacttctgc ttgatttttt tgtacctctt ttcactgtgt aaaatcaggc tgggcagcaa
      181 gcctgtgatt tgtgagagac gcatgtgtgt gaattccccc ctccctgtgc gggagatgct
      241 gctgtgcctt gggatgcagc cctcaacccc cctgaggccc cattagcttg cctgcctgcc
      301 cctgccatat caggcaattt tttaaaatat agaccccatt ttttatttct gcatttatta
      361 caaatgcaaa ttacagatga aagcatcaac tacacaaacc attactcaga ggagcatctt
      421 tccaactgct ggacttggac tgaacagctt gtggttaatt tgctatataa tcactgcctg
      481 caacaggaaa gcaagtgctt caactgtgct aatattatga aaggggaagt taaccataga
      541 gataaattct gaggagctgc agctgggatg aaagagggaa ataaatgtag ttggagtcca
      601 ggcttcaggc ttgcaaaagt ggccgcttgg atatttaaag ggataaaaga taagagttca
      661 gattaaacat gtgttttttg aagttgcttt tagcctgcat atatttcccc cagaagcaga
      721 gaatccctgc agctcccatt gacctgtgat ttgagcagcg ccctggcctg tacacaggca
      781 tgcaaataga ataaactgtc tgcactgccc tgatttctgg gtggcttccc agggcagctg
      841 ctgtttatgg aggcagacac aggcactgtg gtacaaaaga gatgagcaca tgacaattta
      901 gctggcaaac agt
//
LOCUS       KCKM01000307             714 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4899apa ultra-conserved element locus
            uce-1215, sequence.
ACCESSION   KCKM01000307
VERSION     KCKM01000307.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 714)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 714)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..714
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4899apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>714
                     /note="ultra-conserved element locus uce-1215"
BASE COUNT          225 a          142 c          146 g          201 t
ORIGIN      
        1 catcatatta atcagctgaa ccagttctat tatgtcttcc cttctgcatt tcaaatacct
       61 cagcagagga gatttacgaa tcttgaaagt agtgaagtag aaaaaccaaa caacctgtgt
      121 ttatggtgcc taaaatggaa aggtctgagt gtactcatac acaaacgaaa ttagaagttg
      181 ctgttctgaa aaagaaatgc ttgaaaaaca ccatggttta aggctttaca gaacatatca
      241 ttgtactcag tgtaggaggt gaagacaaga ggcaatttat tctgcagctg gttgagaaat
      301 aaacagagca acggaagata aggagtgaaa gagggataaa tcctcctgta gcaaacttga
      361 tggacagaca ggctgccatt aacaatgctg ttgcctttgt aagtacagag tgatgtggag
      421 ataccctggc atttatactg tagacatggt ccttaaagat tttacacctc caattcctta
      481 gaattatcag ctatctccag cctgtcactc atcctggcaa tcttagattt ctggcttgca
      541 ggctgggcag attattgaca aagcaatcca gggtgatata atacaccctg acaaacaaca
      601 gtgaggggga ttgtgcttac cactttctct gcaccaattc cgctaaatta attcttaacg
      661 ctgaaagtaa actttctctt gataggcatt cactcccccc gtgctattgt tttg
//
LOCUS       KCKM01000308            1167 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4913apa ultra-conserved element locus
            uce-6690, sequence.
ACCESSION   KCKM01000308
VERSION     KCKM01000308.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1167)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1167)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1167
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4913apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1167
                     /note="ultra-conserved element locus uce-6690"
BASE COUNT          279 a          319 c          280 g          289 t
ORIGIN      
        1 taagcaatga gaacaagcga acgtgcctct ctggcgttat cagttgcatg ccttgcagac
       61 tggggtttca gaatagctca gcaccatctg catgtagaca aatgcctcct cccgggcgta
      121 gctgcacagt ccaggctggt cgcgtgtgtt ctgtgtgcca tgtgcgcaca ggcaaatgga
      181 tgaagtattt gctgcgggat tggaaacggt ttttgttttt ttaataagcc gataactgtc
      241 agaaagggtt cgtagtaccc atggatatag gctgtcagca aagtcagctg ctgtatgtat
      301 aggcttatgt gatttcatgt tctgctttca tcatcttttt cttcttcctg ttccccctcc
      361 ctttttttct gttgcagggt gatcttgagt tcttcttaac ttgctagtgc tcagcctcct
      421 catgcctcca tctcctttag acgacagggt agtagtggca ctttcgaggc ccgtgagacc
      481 tcaggatctc aacctttgtt tagactctag ctatcttgaa tctgcctctt ctgccggtga
      541 gagccactcc agtctgctcg gcacagctgt cgtgtcccta aagactgcta atctcacgta
      601 tatgccctca tccaacggct ctgcacgctc cctgagttgt ggatgcagca gtgccagttg
      661 ctgcactgtg gcaacgtacg acaaggacac tcaggcccaa actcaagcga gcaccagcag
      721 cccaacgccg gagcctccac cgcctgccct gccacccaaa tggtcaacag caatgagaac
      781 accggcagct tgagcccgtt gggcggcgtg gggagcccag tctcgggcac cgccaagcag
      841 cttgcgagca tcaaaatcat ttaccccaac gatctggcaa agaagatgac caaatgtagc
      901 aagagccacc aacagaacca agggcccgtt atcattgact gcaggccttt catggagtat
      961 aacaagagcc acattcaagg ggctgtccac attaactgtt ctgacaagat cagccggaga
     1021 aggctccagc agggcaagat caccgtcttg gacttgatct cctgccgaga aggcaaggac
     1081 tccttcaaga ggatcttttc caaagaaatc atagtttatg atgagaatac caatgagcca
     1141 agcagagtaa tgccttccca accactc
//
LOCUS       KCKM01000309            1065 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4929apa ultra-conserved element locus
            uce-2963, sequence.
ACCESSION   KCKM01000309
VERSION     KCKM01000309.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1065)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1065)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1065
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4929apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1065
                     /note="ultra-conserved element locus uce-2963"
BASE COUNT          268 a          238 c          255 g          304 t
ORIGIN      
        1 tatatataca cacccacata caaatatttt aactattcaa gatcactgga ggaaagaaat
       61 tgccaactgt cctcagctcg ctctgtcgtg gcccggcaac agctgattta taggaatgtt
      121 aattgcaaga atgttaattg caagatcagc tttaaatgaa cttttttatc cccgaattaa
      181 tttcctgaca tgtttcgaca cgttttcagg tctggacatt tcactccgta cattcatttc
      241 caagcatgtc agcttggaag gagatttaga ggccaccagg cgttacttca attagcgggc
      301 tccgttttcc catccgtcca tcatcgttta ctgggaccgg tggccgcgtt tcctagaaaa
      361 gtctttagaa gataaagtgc gtgtttttgc tgaaaaaaga tttcgagctg catgagggca
      421 gagcggagta atttggcacc tccgagcgat tcggagagcc tcgcagggtt tgccagtcgg
      481 ctgttaactg gagcgagcaa aggagcgtct gttggattaa cgttacggtg aagtatggga
      541 agctatattt catcgctgtt atggctgcaa gaacaaatgg tgtttataca gggaccttgg
      601 cagtgagaaa acagtcatta aacaggaatt aaggagcttg tcatcgccac ttcttttcag
      661 ttacagaagg aaaaacccct ccaagccggt tttattgggc ccctgtgaat tttgcagtca
      721 gccgggccag atggagctga atggagaaat ggagtatttt ttttttttcc ccctctcctt
      781 tttgagacag ctcagcttac actgcaggca tgttcagagg tatcgcgccg ctctctgtgc
      841 aaggagatta atgtcccctc tgctgctgtt tgatgatctc tggcgtgtct ttccgcaggt
      901 gaccccacgg aagaagttca aatgtcccga atgcacggca attgatgggt tatcgctgga
      961 ccagacgcac atggtggaga ggtgagtgac caccctttat tcctccgatt gccttgttct
     1021 gagcccgaga atcttaccct ctgtctcatt aaattaggat caaaa
//
LOCUS       KCKM01000310             925 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4945apa ultra-conserved element locus
            uce-1305, sequence.
ACCESSION   KCKM01000310
VERSION     KCKM01000310.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 925)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 925)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..925
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4945apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>925
                     /note="ultra-conserved element locus uce-1305"
BASE COUNT          250 a          199 c          181 g          295 t
ORIGIN      
        1 tttttatttc ttcttgttcc aaattcctct tcttccaaag cagtggggga gagagatgtc
       61 ctagaggact tctggttcaa ctcacgccgt gtcaggagtg gtgactgctt gaaaactaaa
      121 agaaaatttc aaggctgatc tagttactat atgaacagaa attatttgga gttagtgggc
      181 aagccttaga cctgaacaga tctatctctc ttgggatata tttaacgtaa ctttttcagc
      241 tgtttcttcc ctcctgctcc tccctgctgc cttcccattg agtggcaaca aacaatctat
      301 ctgccccaca atggttagta cagcacagag cttgatgcag ctctggttga ggtcaagcac
      361 tccaattcga acctctcaag ggctttctct atgtgttgcc agtgtactgg taaaaatgac
      421 tttaaactct tgtcagcgca gttactggtg catgcatcac agtcccactc aaataaacct
      481 gtcacaacac agagtcagca gctagagaag agtacaaggg caggcctcta gcttttcatt
      541 cgagcatcac taaacgtgca tagagtgccc aattatttca gcattattga gcaagcctac
      601 aggaggaccc aagccttgct acattagatt ttctttagta atttgctcaa gtaccgctga
      661 ggacacttaa agggcttaaa acggtggctg caaccagttt ccttttctgg attgttaatt
      721 caggttttct ctttcaaatt aactctcact gcatgctgtg cagtagcact gggagaactg
      781 tttaacacta attttctcaa ttttcagctt ttttttgcat tatataactg cttttatagt
      841 tacatatgtt ttgattggac atgtatgcag tgtttttctg ctacaaagag tataaggtaa
      901 tacatctctt gtcagagaaa taaaa
//
LOCUS       KCKM01000311             792 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4960apa ultra-conserved element locus
            uce-4115, sequence.
ACCESSION   KCKM01000311
VERSION     KCKM01000311.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 792)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 792)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..792
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4960apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>792
                     /note="ultra-conserved element locus uce-4115"
BASE COUNT          250 a          111 c          140 g          291 t
ORIGIN      
        1 agataattta tgattaaggt ataacattgt gttattcagt aagatttata acacaaataa
       61 tatgattttc tcatattaaa gcagtgtgat cacttatatg tagaattaat atacattttt
      121 aagggagtta tcccttttgc agctctgcac tggttctggc agtataagtt catctttaaa
      181 tttatataga tttagagaga gatgtttaaa tttctgtacc tcttaggggt aaataaatac
      241 attaaaataa gctatgggtt gtatagtaca gtataacaat gataaatgat gttgtgtgta
      301 atttttctac tattaacata aagtaatata aactgaagga cactagtcta ttgagagagt
      361 tagtagctaa tgttccatat cagatgtgga caatgtcagg actgaataca gattaggcag
      421 tgtccttttc tccccagggg aattaaactt tgagacacca ctggctgcca atggttttac
      481 tgcattttgt tggtgcctgt ggtgcctttc ttggtctatt aattcagaag ctgtaaatga
      541 caatgtgagc ttttccagtg ggatgcattt cacttatgta ttcttgtatc tacaatacaa
      601 gatttcaatc cattttgtca caataactgc ttaaaaaatt ggatagttca ttgttacttt
      661 tgcgtgaaac ttatcaagat atttcttatg gttatttctt tattattatt tggaaaaaac
      721 aaagtgatat gttagaatga cttagaataa tctgagaact ttaaccactg gaatggattt
      781 tccctacccc ct
//
LOCUS       KCKM01000312             999 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4975apa ultra-conserved element locus
            uce-2122, sequence.
ACCESSION   KCKM01000312
VERSION     KCKM01000312.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 999)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 999)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..999
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4975apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>999
                     /note="ultra-conserved element locus uce-2122"
BASE COUNT          311 a          153 c          192 g          343 t
ORIGIN      
        1 aactgggaaa aagctattat gaccaaaaaa caaattgtta ggaaacttat acattgaaac
       61 aatatgctta ttaattgtaa ttttttgggg agggtgaaca atttcatttg atggttacgt
      121 ttttcagtct tataaattaa tttgaattac ccaatattac ttaatttttc cctaggaaag
      181 cttctgcttg cctgagcagt attataactg ctaattcaat tacactgaaa ttgtttaata
      241 gaaaatataa ttgcttattc atacagaata cccattaaag aagtgcaaag gcctataccc
      301 tagggttact acatattagt actttgggaa ttcagatggg aatgctgggt agggaaggtg
      361 ctgactgatc tttaattgtt catcacctgc ctccaaaata atatgaatgg acccaaacta
      421 aatgaccact cattacaagt ttcaatttag gagcttggct ggggtcagca gattgcttat
      481 gctgatcgca atgatttgaa gttgtgatta ccataagcaa tttaaatttt attgatctac
      541 ccttctgaaa gttgtaattg agcatagatg ttggacccgt agctctccaa actaaattgt
      601 actctgaagc ccttgctgga ttactgcaag aatcaataag cagtcagtca cattaacaat
      661 gaaatagctc cattaacata cagtgctact ggtgaaactt tatttaggag gggtgttagt
      721 tcacttcatt gttttatcaa tgaatttctg ttgtacaggg aaaagtatag cttgtgtatg
      781 cctaatgagc ttgcataatg ataatcttat atggtttaac tttgagtctt tttatggaaa
      841 agaaaggttt tttttttctt ctgtgagaga tctgctttat tatgagcaga ggaactatgt
      901 aactggaatt acaatttgtt aactgtgatg cactgaaata acttgggcgc cgaggagttt
      961 tctactgtga catatgttca ctattagtgg gtttcagac
//
LOCUS       KCKM01000313             253 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 4990apa ultra-conserved element locus
            uce-3449, sequence.
ACCESSION   KCKM01000313
VERSION     KCKM01000313.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 253)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 253)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4990apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>253
                     /note="ultra-conserved element locus uce-3449"
BASE COUNT           68 a           39 c           57 g           89 t
ORIGIN      
        1 attttcagac gaatttaggc tatctcttcc cttctcagaa gaatgttctt tgtcattgtg
       61 gtcttcagat ttgtgcttct tggaggactt ctctttggat tcatgtcttc ttgcctgttt
      121 taagaagaag ttggttcttt caggaaaata gtgcaacaaa gagagttagt atgggtatca
      181 gaagataaaa aatgataagt tgtgatgcaa cattagtaac cttaggagtg tgactcagtc
      241 accagtgatg gct
//
LOCUS       KCKM01000314            1058 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5004apa ultra-conserved element locus
            uce-1333, sequence.
ACCESSION   KCKM01000314
VERSION     KCKM01000314.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1058)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1058)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1058
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5004apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1058
                     /note="ultra-conserved element locus uce-1333"
BASE COUNT          316 a          216 c          185 g          341 t
ORIGIN      
        1 tatactagaa tggataaatg tttatttcag gaaaatgtga aagatttgtg caaaaccatt
       61 gcattctata tatagtcctt catttaacaa ctctacaaac ctgcaaaagt tggttcttgt
      121 tgaaaactgc caggctacat acaatgaaat ctggagtagt aataccagag agctgtcagt
      181 cagccatcca tccatctaat tggcttctta ccatctttcc atcatgtttt ttttataact
      241 ggtcgcctct ggctaaaatg caaatcatga ggaagagccg tctagaaaaa gctgctgctt
      301 tcttaattat ctgtcagagt atggaccagt ggaccctggg ccgcagagta gagttatgct
      361 aaacaacaag gcatcatggg aattggagtg acagctcatt ttcctcttgt gtttttctgc
      421 gttcgaatga caatgcagaa atacgggttt ttcccacact ttctctgaac acctgggcca
      481 atgctcaggg gaacacaaag ccaaaactgt cacatttcca gacatggtct tattgctgtc
      541 actgtgacag gattgttgac aaatgccagc agtcatctca gcatcttggg aaatgtctgc
      601 cgtggttgtg tcaacagcct gacagaaatt gttaatgttt aaacttcttc cactgacaga
      661 atcctgtctt gctgacagta tttgtcatat gaaactcaat ctttgtcaaa cttgcttaaa
      721 aattaacact tcctccattt cttttgcagc taactgcttg tgtgcttttt tttttttcct
      781 taagtaataa gatttcaaca aggtaatatt ccacagtcca caataagtcc aagagcaaaa
      841 gcacattata aacttatggc cagcttgtcc ttttgacctc tgctacaatg ataattatgc
      901 ttttattcct tgcccatttt ttttgcctta ggaatcaaag ttctgaatta ttcaagagcc
      961 ataaaaatcc tatttctcag tgtacaatgt ggaaaatcaa ttaaacagag ttagcttagc
     1021 acttatataa aaatcaagtt acaagtttgt agacatac
//
LOCUS       KCKM01000315             640 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5020apa ultra-conserved element locus
            uce-7621, sequence.
ACCESSION   KCKM01000315
VERSION     KCKM01000315.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 640)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 640)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..640
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5020apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>640
                     /note="ultra-conserved element locus uce-7621"
BASE COUNT          180 a          148 c          134 g          178 t
ORIGIN      
        1 aaacaaagag ttttctcttg ttctggcact gaataattat tgctttgtga tttctcttcc
       61 tccaataggc aattgtggat tttaaattag cagaaagtga aattctattt gtcatcaatt
      121 tctcctaggg gttacagagc agaaaactgc agacaagctg cttctttgat ggctcactcc
      181 taaaaatctc tttttgttct ttatctattt gaactgacag tgatcagagc tacagcagga
      241 caggcctctc tggagaaatc accttccccc tgtctattga cagattcctc tgttctgaat
      301 cagacaggcc ttgtcccatc ataggcatca aggccttgga agtagcgacc aattaaacct
      361 cttgagccag taaaatctga agccactttt gagtgtctgt tctgattagg caggatgaga
      421 caaagcccat cacccccccc agagcagctc cctggtctca attttctctc ttgccttcac
      481 caggtgcgag aggtgtgaga ggagcttcac acaagccacc cagctgagtc gacaccagag
      541 gatgcccaat gagtgcaagc caataacaga gagcacagaa tcaattgaag tggattaact
      601 gattgactgg ttggaattaa actgcaagga aagtcatgat
//
LOCUS       KCKM01000316             982 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5035apa ultra-conserved element locus
            uce-5198, sequence.
ACCESSION   KCKM01000316
VERSION     KCKM01000316.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 982)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 982)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..982
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5035apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>982
                     /note="ultra-conserved element locus uce-5198"
BASE COUNT          294 a          182 c          157 g          349 t
ORIGIN      
        1 actgttcagg aagaacattt agcgtccatt ttctgtgttt ttcatgtagc tttctctaca
       61 gccaacaaaa aaatatgtac aatttgtttc ttgcctatgt caagttttta aaagcaaacg
      121 ctttgtaaaa attctgtgga ctgtttatta ccgccaactt agtgaagctt ttttagacta
      181 tttggattga attattccac tttcaaaatt agagatattt tgaatcacaa tagcagcttt
      241 ttttttgtcc ttttgaattt gtggaacgat acaggtaata ttcattattc ttgtgtttgt
      301 cctgatttta aaatacttca ctactgaaaa gctaatatgc tgcaccttgt cctgtcctta
      361 cccctattag atacaaaacc agattcctgg agccatattt ccctttgtgt tctatcctat
      421 taaacctcca aagtccgtca ccttggattc aggtttgttg ttctagttta acataatcct
      481 tgcttctaaa ataccaagat aacgtgctgt actgaagttg actgtgtcac ttttgacaga
      541 tgaagtctgt ataagcttac tgacaacaga tagcacaaat actaatatta gcaataggga
      601 aacagttttc tttacaaagt tgaaaactat ttaaacagtt acgaatcaga agaaaccaaa
      661 atttcttttg tttgtcaata gcataccttt taagcacatc tttttgacac actaatttag
      721 tgctcttgga caacataaca tgaaatttac atttacatca agcttaaaat gggcttttgg
      781 caactgcatt ttggccacaa ctaaaactta atgctgacta aaatgagaga agaattaact
      841 gctgaccgta agatcaaact atggcttatc ctgatggttg tgaatctatt ggactgtttc
      901 catattactt gcatttggag ttccagggca gtgggagttc gcttttaatt tttagacagc
      961 tgacttttcc tgctgcccca aa
//
LOCUS       KCKM01000317             680 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5050apa ultra-conserved element locus
            uce-7734, sequence.
ACCESSION   KCKM01000317
VERSION     KCKM01000317.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 680)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 680)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..680
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5050apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>680
                     /note="ultra-conserved element locus uce-7734"
BASE COUNT          214 a          129 c          128 g          209 t
ORIGIN      
        1 ttactaaccc atcccagggg gtaggatttt atttccggac catatgaaaa tgctgctaga
       61 tgcccatcag atattttcca atgggctgta aattcagcta gctcagtaac tggttttaag
      121 aatatgtatt acaaagacat tgccaggtta taatccaagt aaaatgcaat ttgtgagaat
      181 taatagactg ttttcctctt cagagtaagg gcactacccc acttgctcca ccaccaaagc
      241 ctattcgcag acgattaaaa tcagaagatg agctaagacc tgaagctgag gaacatacgc
      301 agaaaacagg tgtcatagct gctgttcttg cttcacagcc atctattcct aggtaaccca
      361 agaagtgtat aaatacatct gttactggaa agtttacatt tgaacagcat acaagctttc
      421 tgtgccagga gttgcaaatt atttcagtgt ttttcattta gattaattta acagtttaaa
      481 ggttgttgtt tttaaacaag atcatcccaa agcctccact actgggagac cttttagaga
      541 tctcgaactt tggagtgtga actcttttaa cttctgcaag tatgttggca ataaatggtg
      601 caagtagtaa tatgtagcat ttaattttaa acagtgattg cttgtgtcct atcacgaaag
      661 tagactatta aaacagtcac
//
LOCUS       KCKM01000318             489 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5065apa ultra-conserved element locus
            uce-1068, sequence.
ACCESSION   KCKM01000318
VERSION     KCKM01000318.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 489)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 489)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5065apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>489
                     /note="ultra-conserved element locus uce-1068"
BASE COUNT          170 a           79 c           95 g          145 t
ORIGIN      
        1 tatgcaatcc aacaggagtt ggagtcctat gaaagcctaa tgacttattt ctcaaaacag
       61 aatgaagaaa gggaagaaaa ggacacagaa ggaaaagtat cattcctttt cttattgaaa
      121 tatgttcaaa aacactttat gaggtcacac tgaaaaaaga gtaattggaa gaaaaattct
      181 gcttgtctaa gcgaagagca catttgtagc agtagggtaa atgttttatc gattgggaaa
      241 ctgggaaact caagtcatta ctcaccatgg gctaaagaat aattgctaat gctctggcgg
      301 aaagattaaa aacagtttct ggaagtattt cttacagtga tcaatggcgt atcatcccag
      361 gccattggat cttcaataac atttttccct tttggtatac aatcaatttt tataatatga
      421 ttcatttgcc agcaggcatg ctttcttcgt acgatgaaaa ggcacttatg caccttatat
      481 tgttgaaaa
//
LOCUS       KCKM01000319             480 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5080apa ultra-conserved element locus
            uce-1064, sequence.
ACCESSION   KCKM01000319
VERSION     KCKM01000319.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 480)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 480)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5080apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>480
                     /note="ultra-conserved element locus uce-1064"
BASE COUNT          157 a           85 c          105 g          133 t
ORIGIN      
        1 ctttatgcac cacattttgt gggtggggaa aagagcaagc tgttgcaaac tcctgtaaag
       61 tacagaaaac ttctactttc cctcctatct aacaagtgta aactattgag gttaagtagg
      121 tggggcaacc ggaagtaatt actaaggcca gtggcatttt tgcggtttaa taaaggcaga
      181 agctaattat tcagttttta tttaagtgaa atgatgccaa aaaggaggtt cctgcggagc
      241 agctgcactc cttcaatgtt accctaattt accacagaca caactgtcac aaacagaact
      301 tttaaacttg atatatagcc acgaaagtaa ggagcccttt gtctggagtg catgcagaag
      361 aactccttta tacaaatcaa ctggcagatg acggacaatg atgaaaattt gattctttga
      421 agtcataatg gtcattgaaa tgtgtgaaat tctggtattg aaaagagagc ggctagcaag
//
LOCUS       KCKM01000320             968 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5096apa ultra-conserved element locus
            uce-5033, sequence.
ACCESSION   KCKM01000320
VERSION     KCKM01000320.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 968)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 968)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..968
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5096apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>968
                     /note="ultra-conserved element locus uce-5033"
BASE COUNT          217 a          226 c          238 g          287 t
ORIGIN      
        1 tgggagtggc actgggggct cttgcacctg cagtcgcgca gccgcttcgc gcaggggtcg
       61 gggtctgaca gtccctgaat gcaaaccctg ggtgtcaggc tcttgcggga tttatgtgga
      121 ggcgtgctat tgttttgccg gaattctttg tgctggctgc ttgcttttgt tggcctgcca
      181 aaggcagggg caggtcactt gtgtcacaac cccagcaggg cacggaggtc ccagcccagg
      241 gcaatggtgg tggcagccgt gggagactcg agacactgtg tcgggtcaga aaggtcgggt
      301 cccaaagggc tgggaccagg aaggtgctgg cacgtcactg ggtgagaggc tgctgaagaa
      361 gttgaagcct ctttttctgt cactccttcg ccttctctct ttcccctcca tccctgcctg
      421 ccccccttcc cgccagccct ttgtcgacac ttgatcattt acatcaagtt gacattcgca
      481 gagtttactc aggggtctgt aattgtattc tttcaccggt tctgcattac caaccatgaa
      541 aatggaatct tatcatccct gaccaatttt taatgtacaa aatgatttgg ccgaggttca
      601 aagggagtca caattgaaat caggtgaatg atacatgtag gtttttttca gtttctccgt
      661 gccttgattt gattttctca tatggcatac agggagatgt agcttatttt tatgtgtgtg
      721 tgtgtgtgta caagctatat aaatgcatgt atatactctg cgcatatatc gatgtactat
      781 ctgcctatct atattttgtg tacatatcac tcaaatttac ccatttgcaa tgcaatagat
      841 gacaatgaag tttgctttaa tccctaaaaa gcaatcaaag aattggaaca gagttaaagc
      901 ctgctgatag tgcattgcga ttaataggac attattaaat agcccccctc cttcagctcc
      961 tcttccct
//
LOCUS       KCKM01000321             795 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5127apa ultra-conserved element locus
            uce-4806, sequence.
ACCESSION   KCKM01000321
VERSION     KCKM01000321.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 795)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 795)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..795
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5127apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>795
                     /note="ultra-conserved element locus uce-4806"
BASE COUNT          203 a          161 c          253 g          178 t
ORIGIN      
        1 agaagcgggc tcgtttgctc atggcatctt cgccggagag agaggtggca gtcgcggtgg
       61 cctctgaggt agcagcgttc agcttgtcga agctgatctt gcgggccagc tcatcccgca
      121 tgttctgatc gttgtagccg aacatgccca ggaactcatt catggtggtg gcggcgtaat
      181 ctcgcagcga tgaagcttcc cctacagaga accaaagtga gagagcgttg atttttcttc
      241 tcctcccatg ccggcactag cggcagggag ggggagtaag gggagagggg aacatgatct
      301 actgacgtgt ggctcacttg ttaggtttta cgactcttaa attaatttgt tttaaaaaaa
      361 aaagtaatta atactggggt aaaataaaaa gagttcatca atgccaggaa aatcaatttc
      421 ctaaatgttc tagccgatgg cttttcagta cattaaacaa agtttcataa atgtctctgc
      481 actcttgcct tggcctaata tgaagaaaaa gtcattttac tggaagtgag accaacgcca
      541 atatgccgag gtctgtacag ttctgtcctt gtgtgtgttt gcagatggaa gcaggtgcac
      601 agaggttgga cggcagcgcc tccggggggc agaaccgcga gccaggctgc gtgtgctggg
      661 gaacagcagg gcccggagcg ggcagggcag cgtggcgtgg ggtgggtaag ggagacgggg
      721 caagacaacg tgtggggtgg agcaggagga gggcataatg gaaaagtgcg gagcagagag
      781 aaagcagctg agacg
//
LOCUS       KCKM01000322             761 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5143apa ultra-conserved element locus
            uce-540, sequence.
ACCESSION   KCKM01000322
VERSION     KCKM01000322.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 761)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 761)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..761
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5143apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>761
                     /note="ultra-conserved element locus uce-540"
BASE COUNT          216 a          184 c          165 g          196 t
ORIGIN      
        1 gaggcacata aagctggtgt ctgggaagct cctttgctaa gaaaaaacac aattatgctg
       61 catttttgtc agaacaacca aagaattgtc tcgttcgtac tgctgtacct tctgaacctt
      121 gtattactgt ttcattgctg gctggctgca tgacctcatt agtcattaat ttccactctc
      181 ataaccttca tgtagccagc caggtgggca gtggtcagta cagaaccacc accccggtgc
      241 gagggcagca gaatcgagcc gcgctgaaac tgcagaccca cgtttccggc aggcgctaaa
      301 atgcggaggc agcacatttt agctggttct tttgaaaaag aacgtaactg aaataagtag
      361 atgttcttgc agttgtcatt gagaagcact ctgcatttat ttggcactcg taacggcggc
      421 ggcagcagca gcattgccct tggtgctgat tccttactac tctaaaacgt ctcctctgcg
      481 ccagaatcca ctggctgttg ctgctcatgc tgtgagacac ctgcactggc tactaggctt
      541 gtcatgacgc acaaaaccct accatcttca gcttgacatt gtgcaagtta taattattca
      601 tccaaatgaa tatgtcagag cagcagcagc agacctctca tcagagcaaa agaaaaatac
      661 atcaaaacat tatcaaccca gcaggaagac agggaccata aggaaaatta cccattttta
      721 atatggatgc cataaagcca tgtctattat tatacgggga g
//
LOCUS       KCKM01000323            1004 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5159apa ultra-conserved element locus
            uce-4154, sequence.
ACCESSION   KCKM01000323
VERSION     KCKM01000323.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1004)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1004)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1004
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5159apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1004
                     /note="ultra-conserved element locus uce-4154"
BASE COUNT          340 a          169 c          165 g          330 t
ORIGIN      
        1 gtaaaatctc ctatctatat acttttgttt ctcaatactt gcaacattaa attaagaccc
       61 tgatgaatta aattaaatag tcttgctttt gctattagaa aaacgaatga tcttcaaata
      121 aactcagtct caacaaaagt aacagaggaa aaaatgggtt tgacatttaa tagtacaagc
      181 attttcctgt ttaaaaagtc ctgcagaaat cttctcagtt atagcatagt gctattctgt
      241 gctttcttaa caaaagctgt tagtgcattt agagtaattt ttccataatg aaaaaagcca
      301 gtatctgtga cagattacat tactatacac acctgcattc gctctgaacc tgctagcctg
      361 ataaattgat aagttggtca catgttgttt ttaaaaggca aagaacatag ttcctaataa
      421 aagaatgcta catatttctt ctaaaaggtt aaaaagcatt tctcagggct cttaaattac
      481 catattctga taccaaggga aaataaaacc tgggcttaga gtcttgtttg tacttagagg
      541 gctttccgga caggaaggca atcttgatgc aattcagtaa accacaatac cggtggggca
      601 ctacaggtga aaaaattgca gctgtacccc tcaccacaat gtattacaac tgtacagtgg
      661 aagatttcct gtacagaaat agggcttggt taactttgtt tcccaggagt agatcacatt
      721 aaaatgttat aaaatcatga tttcctgcat ttgaatgctt gtggtttctc aactggttcc
      781 aatattacaa agggtttttt atagcttcta ttagttgaag atgtatagaa gcttttttcc
      841 aaagtcagct aaaaggcagt tatgtatttt taaagaacag tttctctcag aagacaggag
      901 ttttctttca catctcttta ttatactatt taacatttat tttagaaact gcactgcaga
      961 tatgcattta aatgaaataa acatgctaat aggaccataa ataa
//
LOCUS       KCKM01000324             960 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5173apa ultra-conserved element locus
            uce-6873, sequence.
ACCESSION   KCKM01000324
VERSION     KCKM01000324.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 960)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 960)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..960
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5173apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>960
                     /note="ultra-conserved element locus uce-6873"
BASE COUNT          297 a          194 c          211 g          258 t
ORIGIN      
        1 gcttcaattc tgaagcctga aatgccaagg gcagtttctt tgggctgtat atccagtgct
       61 acatggccca tgcttcaagt tactttgtct gtcagtttgt ttaccggtga agtaaaatac
      121 ttcagctgca tcctctgaac agttgcacct cagcagatct gacactgtgt aatggaagaa
      181 aaaaacatgt tacaaaaagc cctagccata ggagaaatgt ttcaactgta tgcatttgtt
      241 ttcacttagg tgacctatat gatgttgcat gttgtccttt ccaagaggac aaactgctcc
      301 gggaatgttg gtgcccttta gggctctata gggttatgtc tgttgtgtgt atacacacac
      361 tctcacatac actgaagaga ggaagtcgtt ttattttaca caaatcagct acttaaagta
      421 aattgagata tatagaattt accaatgaaa tgagtgattt gatgtgaata aaagaggtgg
      481 tgtgttgtaa atcagtactg acagccaaat gggaaaaatt gacagagcac tgtaatcact
      541 cccaacatcc actgaagtta ttgatccaaa acctctataa tccccttcac ataacacaag
      601 caatttcata taatacctgt aataacagtg cattcaaact caagtagcca tcagaagctt
      661 tgtatctaat ggcaaagcag gcctctgctg agtaagtgta acaactagag cacaaaaccg
      721 acgatgactc tcgcctttca taggtacagg tctgcgataa gagctagttc agaagataaa
      781 cagttcctca cgccaaggaa aatgagctat taattgcccg ctcactaaat gcgttgtaaa
      841 ggccctaaag ccctgggtgc aaagccagga gaaggtaggt gggatctggg gactgataac
      901 gccctgggtg ctatccacag ggcagctatc tgatgttaat tacaagaggg gaaggagggc
//
LOCUS       KCKM01000325             833 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5189apa ultra-conserved element locus
            uce-2325, sequence.
ACCESSION   KCKM01000325
VERSION     KCKM01000325.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 833)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 833)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..833
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5189apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>833
                     /note="ultra-conserved element locus uce-2325"
BASE COUNT          279 a          158 c          168 g          228 t
ORIGIN      
        1 cgtcagtgtg ccaatcacaa acaaatagag aagcattcag agaaatttct ccagcttccg
       61 aaacgtgaag tattttgctt ctcctctcga aaaactacgc gatagaacaa aactaggaag
      121 agagcacaga catcctttgc aacgttgtct ttgtaaagcc agcctgttgg gtcatgcgca
      181 gaaaagagcc aagcagtgag actgagattg tattgacaag aacaagatga atggccccct
      241 ggagactatg gggtttgtat gctcgtttcc accacctttt catccttttg tacccgcttt
      301 cagttcatat gcagattaag tcaaaccaag tcctcactaa atactctttt tcactttagt
      361 tttggaaggt agatggagga tctaaatatt tatgaggctt ttttcctctg gtttacgatg
      421 cactcttgtt gaatgttgag gaattgcatt aatgaatgca tgcctgcaca cacagacaca
      481 gaaaccaggc aaaaggaggg gacacacaca aagcgttgtc agctctaatg tcagcacttg
      541 ctaaaacagt tcccatgaaa aaaaaataaa aagcaaggag attaaaaatc agttgccagg
      601 agaaaaaaaa attgtatggc tgaacacaaa agaaagagca aagtttcgtc tttgctttcc
      661 tcagctgtaa atgtaactct tgtttcagct ctgaataaat ttgaaataaa acatgttaat
      721 tggaaaatga aagcttgtct agaaggtctt gactggattt ctgttttcag taatgaaaaa
      781 aaggcaaagc ttcagtcctg tacaagtttc tgtaacatca gtagtagtaa aca
//
LOCUS       KCKM01000326             659 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5204apa ultra-conserved element locus
            uce-7622, sequence.
ACCESSION   KCKM01000326
VERSION     KCKM01000326.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 659)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 659)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..659
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5204apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>659
                     /note="ultra-conserved element locus uce-7622"
BASE COUNT          210 a          124 c          133 g          192 t
ORIGIN      
        1 aaaaaaaaaa gcatgccaca ggaagaaaat aaatccaagg caaggtttgc tgtgctatga
       61 gtttgctcat ccctagttta tcttctgcaa atgagcgtgt ataaaacagt ccacctactg
      121 ttctagttgc tacgatataa tgcagttcca ctgaatgatc ctgttaacct aaccttcaat
      181 ttgctgggat ttgaactctg aattacagct tactaacata gtttaacagc tggtacaagg
      241 gcttcttttg aatttttaat cacatgaatt aaagattgct ggagatgctt ttcagacctc
      301 cactagcagt gatccaacgt acagacagac aagtataggt agcccctgga ggattaagag
      361 cacaaaggta tgacgacttg tgaagctatg ctctgctttg ccaaattaga gatactagtg
      421 caaattattc atatgaagat aaattcgcat tatggctcca aacagaccct gagacatgta
      481 ggttgttctt aaaatccctt tttcagcttg tgttcttata cacggtgtgc atcgcacaga
      541 gcacaggttt tgaagataag gctttagcaa aacgtttctt ctgttctgtg tataaaggca
      601 acgcggatac aaaaaaaatg catagagagt gattgcaact gatatctgga atgcaatga
//
LOCUS       KCKM01000327             426 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5219apa ultra-conserved element locus
            uce-4750, sequence.
ACCESSION   KCKM01000327
VERSION     KCKM01000327.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 426)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 426)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5219apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>426
                     /note="ultra-conserved element locus uce-4750"
BASE COUNT          116 a           98 c           83 g          129 t
ORIGIN      
        1 cggccgcgcg cgcgaggaat atcagcgctc ctcacatgcc gcttcctgac atccgctgcc
       61 ggagctgaaa actatctcta ttgtccagtt tgattgcctg aatcaaactg atttacagca
      121 aatccatctg agctttgata aatctattac agtttcattt cactgatttc attaacgtga
      181 ataaaaccag ccatgctttc tgcataactg ccttttaatg gcttggccct gtcacctgcc
      241 tgaatattaa tccccctgac ttattgctcc acagagggaa tgagtaatgg gtatttgaat
      301 gtgatcagca cagtacaatg caattaagga agcagtactg ttctgtgcct ttaatcctga
      361 actaatttga attgcagttt gatagcacag tgaatcctgc ataattatgt agggtgcata
      421 ttaaac
//
LOCUS       KCKM01000328             619 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5235apa ultra-conserved element locus
            uce-596, sequence.
ACCESSION   KCKM01000328
VERSION     KCKM01000328.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 619)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 619)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5235apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>619
                     /note="ultra-conserved element locus uce-596"
BASE COUNT          173 a          110 c          142 g          194 t
ORIGIN      
        1 ttttatgttg ttgaaatctt aattcacgag catttaaatg ttggctgtgc tttggtccag
       61 gtggagtgtt ccagtactaa ttttgctgat gttatggtat gtgcattata ccacgagcct
      121 ttatttgttt ctttgtggag caggagcttt tcacggttta atgacgcaaa cttcaagaag
      181 caaaaccctt atgaaaaggc atggctcaca gaccttttag cgacagaaat gcttaaaggc
      241 ggtacttctt ataagagttc ttcttgctta gtttttaaac tgtggctggc gtttagttaa
      301 atcttttaca gactcagttc actgaaggtg acagaagtac tcacttgagc tcaatgaaaa
      361 gtagacatga cagtaaattt ttcagtcaga gacaggagat cttgttatag gagtcagtat
      421 gggggtcagg gcagagcctg ttgatgattg aggaaaagag aagtaaattc attctgcttc
      481 aggcactttg tcaagtgcca gtagcttacc attgagaact agtcacccgt tcgagtcgta
      541 cggccctaga ggtcactcat ttgatataaa tcatagcact gcataggctc agcaacctat
      601 tgccattcga gatgaaata
//
LOCUS       KCKM01000329             926 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5250apa ultra-conserved element locus
            uce-1849, sequence.
ACCESSION   KCKM01000329
VERSION     KCKM01000329.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 926)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 926)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..926
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5250apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>926
                     /note="ultra-conserved element locus uce-1849"
BASE COUNT          270 a          187 c          181 g          288 t
ORIGIN      
        1 tctgcacttt tttcagctgt tttgtttcat ttatcaaact tgttcgtgaa aatatgtttc
       61 ataatttaga gtctccagga ataaggtagc ccgtgttttt gttcgctgga aaatggaacc
      121 actcagtaca ctttgtgtaa aatgttgaaa cttttaccat taaaggtgtc gacagtgaag
      181 ctttcactgc agtatgcctg attttaatgc atctacagaa attcccagtc agttgtctat
      241 gctatgagat gaatgcattt gaaccagaat cgttctttct gcatgccaca tgctcatcct
      301 gtccatgtgc ctagcaagga tgagcttcac aaggcctttg ggatcagcct taagtgctca
      361 aagagatgag gcaggcagca cctacttgtt acatggacag acacaaagac cacagaattt
      421 tcctaggtcc gtcaaattct tttctgcttc tttcatgtcc ttattgattt ggtccattcc
      481 ctcttcgatg cgttccagtt gttctgatta aacacaagta ttttatcccc acagaatgaa
      541 gcagatggaa aaggacaaag aaaaaaaaga caaaaacttc agacattcac tgtgacaaaa
      601 aactggacac cacatagcag agccggtacc cagtacctac ttgttacaag gacatatgaa
      661 aaggccacag catttcccta aatcttttaa atttttctcg gcctccttca tgtcttggtt
      721 gatatggttc atgccttctt caacacgatc gagttgttct ggtcaggaca aagggatgac
      781 agtgtggaat gaatagtatt tttgtttttt tgtcttcaac agaacatgaa aaatgaccat
      841 gtagaactga attaataatg acattacaat gcattaatct gggctgatgc attgttgaaa
      901 ggatgtatgc cgcactggat gctgaa
//
LOCUS       KCKM01000330            1005 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5266apa ultra-conserved element locus
            uce-4705, sequence.
ACCESSION   KCKM01000330
VERSION     KCKM01000330.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1005)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1005)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1005
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5266apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1005
                     /note="ultra-conserved element locus uce-4705"
BASE COUNT          299 a          185 c          181 g          340 t
ORIGIN      
        1 gttacagtgc cctgtcaagt gtcaccttta ttcaggtgct aagggttttt aatcagtaat
       61 ctcacgtttc caagcatgtc ggtccttccc tgaagctttc tgtttaagtt atgagcaaag
      121 cttttctgag agtattgaag ggaatgagga aatatcctct ttactagtaa ccactttaga
      181 tagtccatta agtccttgga ttacaacctg attgaatgat aatcaatgac cagacatctg
      241 aaacttaaat taaatggttt tgtgcccagt ctttgagtca cctgtacaac gtctgctgag
      301 aagtcccttc tactttgaaa gttcttgtgg tagaacagga gtgacctagt catgttttcc
      361 tcctcccact agtgagctag gaacttgcac tattgcatgt gggctgtcaa ttagcattat
      421 ctccatttgt tttagatcca gacaggcgat ctgtttcaac aatgaacctt tcgaaacatg
      481 ttgatccagt cattaacaag cggctctcct cctcatctgc aacattacta aattctccag
      541 acagaggtac agtttcaaag aaaaaaaccc actcaacaaa acaaaaagag caagaaagaa
      601 tgttctgtat tgatgtatta ctttgcacat aaaccaagca tctaaagtaa ttttctgtac
      661 ttcctctaag tgggagtgaa aagacttcaa atgtgaaaag taaatggtag aacatttttt
      721 cctgtgagaa gaaatatata ttctttaaaa caagagaact tacttacttc agcaaatgag
      781 aaaagcagtg cttctgtcag gtttttagta aatgaggtac aactattgaa agaatacatt
      841 gctccatagt gcatgcaatc atgtgtgatc ttttatttgc attaggccat tttgtcatta
      901 ttttgttttc ctttttgatt cggtagtagt ttttggttat ctaagaacac tttgcatgaa
      961 gctttccagc agttatttta ttaccatttt ggattatttt tattg
//
LOCUS       KCKM01000331             559 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5282apa ultra-conserved element locus
            uce-8029, sequence.
ACCESSION   KCKM01000331
VERSION     KCKM01000331.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 559)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 559)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5282apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>559
                     /note="ultra-conserved element locus uce-8029"
BASE COUNT          169 a          111 c          105 g          174 t
ORIGIN      
        1 aattctttgt aactgagagt ggctgagaca caaaactcag ccccatgatt ccaagtgtag
       61 catcatttat atccataagc agattaaatt ttaaaatttc tctcaatacc actgaccaga
      121 ggagcaatgt cattgttaga aaatgcacgc actgcttacc ttataatcaa attttcactg
      181 ccttttctga caggttttta agttacttaa gggatctatt tatatgtgga agcatcaaca
      241 tcatgcagta aatccaacca caactcagtc acatatttta ttaagtttaa gttcagtgaa
      301 agtgcagagt aaactagggc cctatgtctc tcagttacat ctgatttgcg gttgctataa
      361 aaaggcccac atgccgctct ttcagatgtg ttttggattg aaaataggat taatgtgcta
      421 aagtgtgatt agaatggtta aacacgatta attggaacag acttgtattg ccaagggagc
      481 tccgctgtta ctggccggcc tccagtttac caagtgaaca aagcaggcca actgtccaag
      541 tttttccatg tctttgctt
//
LOCUS       KCKM01000332             893 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5298apa ultra-conserved element locus
            uce-5164, sequence.
ACCESSION   KCKM01000332
VERSION     KCKM01000332.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 893)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 893)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..893
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5298apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>893
                     /note="ultra-conserved element locus uce-5164"
BASE COUNT          266 a          193 c          158 g          276 t
ORIGIN      
        1 aagtctgatt ctgtccaagc agtgtggttg ataaattaat gtaaataatc tacagcattt
       61 tgctctgagt agcccaccac cagttagaaa tctcatggag aatgaagcaa caaggaaatg
      121 ttgtagaact ggtccctcaa tgttgtttac ttttccaata ctgggtattt tgaaaaacta
      181 tccttactta catgaacaac acacagagaa gagttaaaag tggcacatta tctttccaat
      241 gacatattta gctggttatt cagactataa tgaagctgtg taatgaagtc aatgtccttg
      301 aaagttcttc atcaattttt ttctcatctg tcagcatatc cacttgccga cacaatatta
      361 attaaacaca acatttcctg gagtgttgaa gtgaagtccc atcactgata atgaacaggt
      421 ttaggagagt cacatcccaa caaaattact ttttaaacca gccttattaa gcagaaaatt
      481 agacctaaat caccctacaa catcctcatt aaaagccact gatccttggc tgcttctatg
      541 ttctaacatc tttaattagc aaactgctag tctatctgcc atgataaatg ctattaatct
      601 tatctttcat ttgctttctc ctaacctatc gtttgcccac ttcagggaga cacgtgcttc
      661 caccagaatt cattttattg agtctagcgt ccttctaagg gtgaaaaatg tggcagtcac
      721 aggttaaacg cgatgactct ctcccccctt gctccatcac tgaattcagg atttgtaggc
      781 aacttgggtg gcagacttgc catgtttgag gggaaattaa gagtattttc cagtagatac
      841 tatggaatat tgtcttcaac acagcgcaac tgtggagcgg cgccccctcg gct
//
LOCUS       KCKM01000333             300 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5314apa ultra-conserved element locus
            uce-7959, sequence.
ACCESSION   KCKM01000333
VERSION     KCKM01000333.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 300)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 300)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5314apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>300
                     /note="ultra-conserved element locus uce-7959"
BASE COUNT           93 a           54 c           58 g           95 t
ORIGIN      
        1 tggtgagatg gctgtttcat tccataaagt gtctgcagtg gatttgaaca gtaggaaatc
       61 caagggtgat aaatagctat ttctaagtaa atttcatgca attgcccttt ggttaaagtc
      121 tttcctctca gcactttcct gtgcacatag cccaactaat aatattcagg agcaagtgct
      181 ttccagtgtg acaactgatt gcactttgaa gcagtaaatg gctgatttca taattggtat
      241 aatttttcac aagtacctga atgtcatata cagaaagaat aagcaacctg gacttaatac
//
LOCUS       KCKM01000334             885 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5329apa ultra-conserved element locus
            uce-5021, sequence.
ACCESSION   KCKM01000334
VERSION     KCKM01000334.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 885)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 885)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..885
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5329apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>885
                     /note="ultra-conserved element locus uce-5021"
BASE COUNT          319 a          131 c          159 g          276 t
ORIGIN      
        1 agatctgtga gattatcaaa atatgaagga aaataattgt gagagatgcc agatgtccct
       61 ttaaaagaca aaaccctgta aatttaattt agccattgag aaagacaaca tcagaaagaa
      121 aaatataaaa gatagaactg aataattgca tctaatagaa gtggcaaaca atcataattc
      181 ttcccattaa ataaatatgt tataaaaaat ttattatgaa atgccacatt atgcaagcca
      241 ggattcagag atgagttctt tgcattaagt acagtagatg ccattaagga aaacagtcaa
      301 tatgtcacta agccacggcc tgtaaaatta aattgatttg gtaaatgtaa gtaagataga
      361 tctgtttgct ttcatcatca attttgagtg ggtgaacagg tgatgtcacc aacctgggag
      421 cgataaagat gcaggaccat ctggaaagct ttgtgatgga tgggcaactg cttttggata
      481 gtgacagtgc tgtggtactt tgtcacttgg gatgcagtac ttaataactt ttcaatacca
      541 tcacaataaa tttcactgcc ttattaatat agaaatggtg agttattact gtgatggcta
      601 ttgtaaataa caagagatgc agctgtcaaa agctgattgt ttgggcatgt ttttttaagc
      661 aacacagttg acttgggata atcaacgtat gtctgtacca gcagagttta ttgctcttgt
      721 caaaagaaaa agctacatta ttcaaatatt atatgaagtc cataataaac aagtttaata
      781 tattatcaga cttttcctat aagtttccta acacagaaca ataaatcact tttaataatg
      841 catttccgtg tacaataata tccttatgct gtaataatgt ccttt
//
LOCUS       KCKM01000335             807 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5345apa ultra-conserved element locus
            uce-5292, sequence.
ACCESSION   KCKM01000335
VERSION     KCKM01000335.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 807)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 807)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..807
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5345apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>807
                     /note="ultra-conserved element locus uce-5292"
BASE COUNT          190 a          173 c          206 g          238 t
ORIGIN      
        1 attagtactt tcaggtctac tgcacaatta aaaaggttcg ggggagtgaa tacgagtcca
       61 atttttcttg gctctcgttt tctgttaacc tctgtcgggt tttgcgcact gacccttggg
      121 gggactgtga gtatgtgggg atgctgctca tcacagtctg cataaacaat gtcctcgtta
      181 agagcgatca gcttagcaag gcccatgaag aagttggctg ccagagccga gcagaagctg
      241 ggactgttgc ctccctctgg gctttagccc ctcctcatta agcaggtccg ggctattgat
      301 tgggagcttg tgtttggaag agtcttactt actccatgca ttatcttgac agattgatca
      361 gacctgattg agaacctctt aaaggaacga acagctgtaa tgggaaagtt ggactctgtc
      421 atccgttagg atgattctgg gagcgagaag aacgaggctg acatcttgga gcaattgtat
      481 ttacaattaa catggctgaa aacgattgcc tctattgatc cccccttcct gcaattacag
      541 ccccattgtt tacattccag cacttcggtt ataaaaagga aattcaataa ttattgcatt
      601 atttaaagtt aaagtgccac agagtttgct ggctacgctt gctggttgat ttaacgttca
      661 gtaaaatcca tgctgagctc tccatcttta ggctgagcca tatttggctt ttaatgaggc
      721 ttcaagggct ggtggagcga acccagtttg ctgggtggcg tttgggggtg tctgtggccc
      781 atagcctctg cctgggtggg accccat
//
LOCUS       KCKM01000336             933 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5360apa ultra-conserved element locus
            uce-1989, sequence.
ACCESSION   KCKM01000336
VERSION     KCKM01000336.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 933)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 933)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..933
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5360apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>933
                     /note="ultra-conserved element locus uce-1989"
BASE COUNT          290 a          187 c          171 g          285 t
ORIGIN      
        1 tcatgactgc aatatgtaac aaatcatatt ttataaaaga attacacttt ggaacagcaa
       61 ctttgaataa tgctagcagg gcgaatatac ttttataata tcagaatact gcatgcagta
      121 gttataaatt gtattaaact aacagaacca ccaacgtttt tgattcactc agaaatgacc
      181 tcagtccggt tttctgtgaa atacaaaaat tgaaagggta caatggcttt ctgtctgtta
      241 ctactgcctg tgccatgcct gaacagagga aaagagtttc actcctgttg tttattgatt
      301 ttctagatta agaatcccag tgagagaatt gtaacagaca accataaaat tatttttggt
      361 gtgcttattt gcctttccct tgcatctatt tggcctgtgc ctgtagacaa ttatgcgttc
      421 cagcctagac tcaggtgcta ataatgaagg acaaatagaa tcatatgtgt aaacttcccc
      481 ttctgatgaa aatttatatt aactttctgc cactgtaaac agaactgcat agctcagcgt
      541 ccctgatgaa ttggtgatga attcagtcat ttatatccca ggaatctgtg catttatggg
      601 aaaagatgaa aaccgtctgt attgtgtaac cttgcacttt ttgagtaaga aaaagaaaac
      661 accagcctgt ttagttcatc acttaaagtg tgtaaatttc agctcaaata ccagatttct
      721 gcaggactct cccggtctcc acttcgggga tccctgccaa tataaacaag ccaaacagtg
      781 cagagtgcca tgttatcgct ccaactgcga acttatacac tcgcagcctc ctgtaaaaat
      841 tgttatgaat atctctgcaa tacaacagaa tctttgttcc aggctgaagc tggacagttt
      901 gacagtttgg cagctctgct ggagaacaaa gtc
//
LOCUS       KCKM01000337             890 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5374apa ultra-conserved element locus
            uce-8031, sequence.
ACCESSION   KCKM01000337
VERSION     KCKM01000337.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 890)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 890)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..890
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5374apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>890
                     /note="ultra-conserved element locus uce-8031"
BASE COUNT          249 a          243 c          270 g          128 t
ORIGIN      
        1 aaaacaggaa tcaagtatag gaataaagaa acagcagtaa caactggcaa caacaactgg
       61 cagaacagag attagtaaga agttctgcaa agaaagaaag gagttttagg tagtctttag
      121 actgtcacaa ctgaggttgt taatagggtg caaaggcaga aaaggtagaa ggggaacagg
      181 aagggggggg aaaacggaag cagaggtgct ttctttctcg tagccttgaa tctcacatac
      241 gagaaaagac agacggactg gaaggacaga ggatgacagg acatgtcaga ccagaaagcg
      301 taccctagaa accagcaaat gggcttcgtg ggtgacaagg aggagagaag gggagaaaaa
      361 tggccaagag ggggccaggg agaaggaagt aggcccaagg aaagaggaca gggagcacca
      421 agagaaagca gcgaggcttg aggccggagc gggtgagctg gcactcggct gcctactcac
      481 cttgatgcac tgcgacattg cagccgtgcc cgtcgcagta gacgagcggg ttctcggccc
      541 agcccctctc gtcggagcac acgcagcagc cgccgatcat ctccttcatg ctattggaga
      601 actcgccctc cagtgacaca ggcagcaaca gcggctcgct agagaccatc taagggttaa
      661 aaacaccgtc gtcaacaaca caacgcgctt cgccccctgc ctgccccctc ccgcggcggt
      721 gtctcccctc agtcactcag ccgccgccgc cgccaccgcc gccacggcaa tgatttaggg
      781 cccatgaccg ctggctgaga gcctcctctc gcccccgccc gaccaaccgg ccaggctgta
      841 tcagtcccgc cagcaggcag gggcggccca gcggcggctc gccgaggagg
//
LOCUS       KCKM01000338             864 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5390apa ultra-conserved element locus
            uce-1810, sequence.
ACCESSION   KCKM01000338
VERSION     KCKM01000338.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 864)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 864)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..864
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5390apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>864
                     /note="ultra-conserved element locus uce-1810"
BASE COUNT          266 a          134 c          153 g          311 t
ORIGIN      
        1 agggaagtgc attttgcttc attcagagca acttcagaca atgaaatgcc tttttttatt
       61 ggtgtctata ttaagagtta gaacctattt agacattcca aaatgttaat gtattagagc
      121 tttttctgat taggttaaac aaactggtag gtttatttat ctctctaata cattatcagg
      181 gaaacggaaa gcaatcttct tttgtttctt actcttgtga tcgtagaaca cttgccaaag
      241 ttatggctag ccaaaaagac agaaataaaa ttgctaaaaa tataagcctt ctgtttagca
      301 gagtttttga gccatatttt gaaaatgcag ggcttgtaca tgtttacttc aaatcaagct
      361 tatagtcaag tttgaggctt tgtttgtata gattgtcctg aagtagatcc tgatatttaa
      421 ttaaaatgac actaaatcac attgaattga taagacttgg catctcaaac aaaggtaatt
      481 gcccgtattg gttttgtaca aaaatagagc tgcttggaaa atgtgcagcc aacacagact
      541 gtcaactcca tttatagatc aatatgtgaa aaccattgat caggcaggca tgtgtaacag
      601 taacactttg catttatttg ttgtttttat accatgttaa ggcttacagg attatcggct
      661 tccaaaatat tttgacttcc tcgtaaatat gttatctgtt taatgttaat tacaagacag
      721 tctccagccc tcttttagag tattttcagt ttcattgctg agggtagttt cagctgaaaa
      781 tggattattt caatctctga gagatcatca gagcttcttc tatagtatag tttatttagg
      841 gaaacttttt gaagattctt tctt
//
LOCUS       KCKM01000339             364 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5406apa ultra-conserved element locus
            uce-2480, sequence.
ACCESSION   KCKM01000339
VERSION     KCKM01000339.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 364)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 364)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5406apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>364
                     /note="ultra-conserved element locus uce-2480"
BASE COUNT          122 a           68 c           43 g          131 t
ORIGIN      
        1 aaccgatgcc tgaaaacaac atttaaattg acacataaaa acagcgattg tcttaatttg
       61 tgtggtgcac tccatacaaa agccctaaat atgttcaaat tagagcaagc tgcttgattg
      121 tcactgcagt ctcatgtcat attaatgcat gacaaacatt aaaccataca cttaaatggc
      181 aatttatatc atttaaatgt ttactgccac accagatcat cattcattta aatgtgactt
      241 tctgacagct aatttcggtt aattttcctc gattcactta attagaactt tcaatcaaga
      301 aaagacctgt acatatcttt gacatcatat cattcttttt tttattattt tttttattag
      361 aatt
//
LOCUS       KCKM01000340             945 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5420apa ultra-conserved element locus
            uce-780, sequence.
ACCESSION   KCKM01000340
VERSION     KCKM01000340.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 945)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 945)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..945
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5420apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>945
                     /note="ultra-conserved element locus uce-780"
BASE COUNT          310 a          161 c          151 g          323 t
ORIGIN      
        1 tgcatagaat cttcagcatt gcataaaatg gcactgctct taccctagag ttattagcat
       61 tcatgttgga aattaataaa gtgctttttt tccatttttt atcttctccg tttttactgt
      121 ttttttttat ttgttaaact gatacatctc tctagatgaa aactgaagtg catttacaat
      181 ttcgttactt tttctattgg cacgttttga aaaaattctt ggttagtttc ttttcccatc
      241 agctgaaaac aactctattc caaagagcta tgtgctgaga ttccctcagt acatagtttt
      301 cgatttctga aacagttgta gaaatctatg gaaaacagag taatgtcatt tcagcagtgt
      361 atcatcctga accagaaact aaagcatgca aactgaaatt gatttgtaac aggtacctta
      421 ttagaagcaa acatcaagaa aactagaatc aatgttgaaa caaaaatttg tcttgtaagc
      481 aatcctgagt gaaatgtgtt gacacagcat cacattctgt agccccattt ttgcatgctt
      541 ttcaaagcac agccatctcg atctgggaga gatgaataat tgactgatca ctgcataatt
      601 caacgtactg ttgtaaaaag tcaaggtctg gcaaatttga agcttttctt ctttattgag
      661 actgaggtta aagtttcaat caaccttgaa gaaacattta aatagcacaa ggatgcatga
      721 tttattaaag tgcattttat tcttccttat ctgcactcct tcttcattaa gcttccttac
      781 ataatgttta tgtgaagttt atgaagtgta cctcataagc tgagcaaaga ttaccttaaa
      841 agatagcact aaaggtcaat catgttattt ttcaaatgaa aaggaaaacc aaaaataagg
      901 aggaaaatgg gtttgaaaat acaaaacata ttcactcatg tcttt
//
LOCUS       KCKM01000341             676 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5436apa ultra-conserved element locus
            uce-857, sequence.
ACCESSION   KCKM01000341
VERSION     KCKM01000341.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 676)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 676)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..676
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5436apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>676
                     /note="ultra-conserved element locus uce-857"
BASE COUNT          216 a          139 c          122 g          199 t
ORIGIN      
        1 cttctgccct ttattttact gaagaatcag tagttcaaga cctagataaa tatttcaaaa
       61 actatactat ttgtgagcag agcaggtcac taccatttcc cagtgcattt ggagttcatg
      121 tgaaataagg gcagaagagt gatgagctgc atttttaaca tgggcataca cagaatagtt
      181 gtctagctga tagagaatgc gtaatgcaac atctgcacag tacgccttgc caaagcccat
      241 cccaaataaa tgtagtgcat tctccctagt gcaattaact ctcgtactct ggcaggtttt
      301 gctagaagat catcaaggta gattaccttc cagcatatga actaaatact tacaggtgtt
      361 atatcatcag ttattactta caaacttctg catttaacaa gacatccagg caaatgaatg
      421 atctaattta tgaattattt ataagaattt cacagcatgc tcctggcgtc atccatggcc
      481 ttttccaggt catatgacac caattagagc tgaattttaa attattcaat aacctgaact
      541 ctcttgtcat ttaacatata gatatcaatg cagtaaacaa gttaagtcta atgggccctg
      601 gaggtttgcg ttcctccgcc catcagcagc agaggctgta tgctaccact ggaacagaaa
      661 ataatagaat gcagca
//
LOCUS       KCKM01000342             208 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5451apa ultra-conserved element locus
            uce-3607, sequence.
ACCESSION   KCKM01000342
VERSION     KCKM01000342.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 208)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 208)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5451apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>208
                     /note="ultra-conserved element locus uce-3607"
BASE COUNT           63 a           28 c           40 g           77 t
ORIGIN      
        1 gtaattatgg tttatgaatt tcagctttaa tctgtagttc agtgagtcct gattaaatat
       61 ctgttaaaca caattaaagt ttgtttttgt atttcaccgt cttgatcaga ataattagag
      121 actgcgtgtt tcatgtcaaa agtagcaaga ggaattttag tgaatgaaca tcgtttttaa
      181 aagccatttg tagcaccagc tgttggca
//
LOCUS       KCKM01000343             616 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5465apa ultra-conserved element locus
            uce-6750, sequence.
ACCESSION   KCKM01000343
VERSION     KCKM01000343.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 616)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 616)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5465apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>616
                     /note="ultra-conserved element locus uce-6750"
BASE COUNT          201 a          123 c          108 g          184 t
ORIGIN      
        1 ctttacaggg gtaaaatacg aaggagtgcg ggggaagatg gatcatggga attgtgtgta
       61 tgtatttaag aaaaacagct tcctttccct ctatttaata taatcacaac atatttcctg
      121 actccagact agcatagctc tttatccagt taacattccc aaggctgatg cctgaagtat
      181 ctaagatcac tttcaaatgc cctttctaac aagacctgag caaaaggcca ctaattttca
      241 ctgaacaaaa agccactgga gagagatccg tttgtcaata tcaactggtc cagcaatttc
      301 ccatcttcag acacatcggc ctatctgagc tggcagatgt ttagacaaga ttttataaat
      361 tgttcaatat cagaccataa tgaaccccaa ctgaccattc caaagcagct aaaagcattc
      421 aggatctccc ctgctgagat ctaataatgc tctcacgctg gaacattatt aatcacggaa
      481 taaaatagat gagcctcttg aaaaataagt gtatgattga ttaaagggca atctaaggag
      541 ctattattct tgttttataa ctgtaagtta tattcactca atttatcttt tcgggaaaat
      601 aaatgattgt tcgttt
//
LOCUS       KCKM01000344            1097 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5480apa ultra-conserved element locus
            uce-1980, sequence.
ACCESSION   KCKM01000344
VERSION     KCKM01000344.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1097)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1097)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1097
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5480apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1097
                     /note="ultra-conserved element locus uce-1980"
BASE COUNT          321 a          179 c          226 g          371 t
ORIGIN      
        1 ttatttctta gttcttggca tcaatataat gctgcagtta tctctctatt tttaaggagc
       61 ctggagtcaa tgctttaagt tcaaaaaaac cttgatgttt acagatatta cttttcccta
      121 taactgtgtc agtattttgg gaatagaata gttttaaaca gtgaagtaac tctagagtgt
      181 tcaaaggaag atttatttaa gtagcttttc cttatgctaa ctgaagaggg ttccacgctg
      241 ttttgttgct ttagttgcat gttaaaaccc ttttgaccac ttgataatga ttatgaagtc
      301 atacctataa taaataagtt ttagactcag ttgcaactgt aataaaactt gtttccttgc
      361 cttttaatgt ttgaaaggta gtagtgcagt atgtgtgtgg tctgagtttt ttgcagacgt
      421 gatctgcatt taatctggga aaattaattc cctaagctgc tggcaggcag catgtacttg
      481 ttaattattc aggtggatga caaatgcaga gcagaggttc tcgcaaagac aaagtttgta
      541 tgatgcgtgt ttagtaactg ataggcttga cattctgtgg tgtcttattc agtgctaatc
      601 ctaataagct gcctgatgag atgaacgcct atcctcctgt cctttagaga gagaaaacag
      661 agatttgaaa gaacttcatt atagcaataa atcccatact ttccattact cctggtgaaa
      721 agagatcttg tctagatgaa taacacacac acagaaaaaa gtcagaatgg tactgtcatc
      781 cagagtcttg aaatgaatag aaaactgtat tgtaaatgca tctgctgtaa aagtatctat
      841 agtttagctt tatcgttagc ccaagtttct gcactttaat gcccttcaaa ttcttttact
      901 ttgatctaca agtgatataa tcatatggat gtatgattcc aagacttgca agttgccagg
      961 gaagtaactt gaaaacattt tgggtactgt agttcttgtt ttgcacctga caatggcaag
     1021 ggccaaagtt tccggtgagt gctggaagca ttgatgactg agaggcttcc agtgcaagtg
     1081 ggtgctggat tttgcca
//
LOCUS       KCKM01000345             309 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5495apa ultra-conserved element locus
            uce-3674, sequence.
ACCESSION   KCKM01000345
VERSION     KCKM01000345.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 309)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 309)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5495apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>309
                     /note="ultra-conserved element locus uce-3674"
BASE COUNT          112 a           49 c           46 g          102 t
ORIGIN      
        1 ttgaatatat aaatcaattt ataaggtcta atgacataca aacgcttaaa aactaaaggc
       61 gatgtagtaa attcaaatta ccattacaaa tgtaagcttt gtagtcagtg tgtgacccgc
      121 taaggattat atttaactcc cctgagagtg gtttatcata aaactttata cttttattac
      181 agtgaattat taactcctcc atgatgtgag tcattccatg ctctgactat agctttttta
      241 atgacactat aatagacatc ttgctaatag cagtaggatt gctacctctg aggttaaaaa
      301 aaaaaaaaa
//
LOCUS       KCKM01000346             700 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5511apa ultra-conserved element locus
            uce-3554, sequence.
ACCESSION   KCKM01000346
VERSION     KCKM01000346.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 700)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 700)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..700
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5511apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>700
                     /note="ultra-conserved element locus uce-3554"
BASE COUNT          238 a          153 c          133 g          176 t
ORIGIN      
        1 aagatgaaaa gcggctgctg agtttgttta agggaatctg gaagccacat acacatcaca
       61 ttgtgctccc ttatctctag ttgaaggaca gtacagataa agtaatcggc cacatgaaat
      121 tttgatattc acttagacac ccagcctatt ccaatggtag aattcccact tagatacttc
      181 ccaaatcaaa aatccttcca ataataacag aaatctaaaa gcctgcctta gcaagggcta
      241 gctccttcca accgcgtgtt cagaggctct ccaacaaaca tacagcacac tgtaagaatt
      301 caatttggaa accatcatct aaagcacaga ggagaacagg aaagtcatat tgctataatg
      361 cttagattat caatcatctt gacagtttat tggctttatc accacacata ccattaaaat
      421 gatgtctggc ctagaatgtc aggaggcaaa cattaaacag accaggatta aaaagcagat
      481 cccaaacagc actccagtaa agtttccctt ccactctgaa attagttaga gctgactaag
      541 taactggcgc tagactttga agaaatatac agcctaaaag gcgcagagtc aacacaggct
      601 tgacgagctg ataggtaatg tcatgttatg gcaactctaa agctcccgca gttgatttat
      661 cacgtactgt gtgcaacaga atgattgcta atggagggtg
//
LOCUS       KCKM01000347             997 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5526apa ultra-conserved element locus
            uce-6732, sequence.
ACCESSION   KCKM01000347
VERSION     KCKM01000347.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 997)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 997)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..997
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5526apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>997
                     /note="ultra-conserved element locus uce-6732"
BASE COUNT          324 a          188 c          179 g          306 t
ORIGIN      
        1 ttagtaaaat aatctgaaaa gggagacact tctttacagt acctcacaaa ttaacctctg
       61 ctaaaaggta aacttaaatt ctggttttca atcttatacc atattattct gaaaacaact
      121 ttgtatgcaa tgagaatggt accttatcat acaaacttaa cttttggaac ggttagtgag
      181 atgggaaata gatggtcaga tttgtcaggt tgattcactt aaaattaggt gacattgttt
      241 tagatttcac ttgattttca gctatgatag acatatttgt atgatatata tgaatttaag
      301 tatttatctc tctaaaaggc gagtttcctc gcttgtgaga aatgttctga ctgggaaggt
      361 ttccaaaatc cctttcatgg aattttctca gctcttgtgt ttgctccctc tccacacctc
      421 ttccccagtg cagagaggca catctgtctg ttttctgcct tatctagcag acatctacat
      481 ctgtgaggaa aactccactt ccttagctaa aaacctgtat ctgattgtgg taataaagca
      541 ctacttcctc agttcaaaac gtacatcaga caggaccaat tacttcaaat gactcatagc
      601 aacaggcaaa gcaatagtcg tcttttcaaa gcctttgaac ttctgccgct tcaaaggtgt
      661 actaaaacgt ggttatgagg cgattgtcta aaattgccaa attaccagtt tcaatgcttt
      721 gacatttgtt attttgagtg actaagggaa agcagcttgt tcacccgccg agaaaaagag
      781 agcagaacaa aaaaggcatt tcctaggtga agagagctct taatatggtg cattcttgaa
      841 cacaaaccag aaaaatgctt tcactttaat caaataatat aattagatta tcaagcaata
      901 ggcaacaata agccaaaatg caaacaatac gatgcaaagc tactgagtga atttaacagg
      961 cttttaatca catcctggag gtcagagagg cttgaag
//
LOCUS       KCKM01000348             822 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5542apa ultra-conserved element locus
            uce-4895, sequence.
ACCESSION   KCKM01000348
VERSION     KCKM01000348.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 822)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 822)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..822
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5542apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>822
                     /note="ultra-conserved element locus uce-4895"
BASE COUNT          153 a          213 c          227 g          229 t
ORIGIN      
        1 ccagtttcac cccggccggg ccgcaaggct gagcaccctc ggccaggccc ttggtggcgg
       61 tggtggccac gttgcccagc tggttgactg ccctgccgcc gccaacggcc ggagccttct
      121 cgccgttgat tccagccacg tttttccctt tcctggcaga tttgggcgcc tgcctggagt
      181 ttttcccttg cggcttttca cttcctttgt tggctttggg tgattttttc cgggtggctt
      241 tctgggaaga gctttggttt gtacccgcat tcttgccgga tgaacttttc ctcttcgatt
      301 tcgacacttt gctattggtg ctaatttgac cagatggctc attaaacgtt gacaagcatg
      361 gactcttttc gagaaggctg acagaatctt catcgttgaa catatggaac tggaactggt
      421 gattatttaa agcaaaccca ttatctgcct gatcctcggt ctgcaggacc ccacagttcc
      481 acttgacctt ctcggagctg ttgagggcgg cctgggggct ctcctggaag cccttcaggg
      541 tgcccagagg cttggcgtcg gagccagtta tctgcgggga caggttggga gtgtccggag
      601 gggacatctc cgagagcgac gactggcgga acttatcggg cgtgaagttg gaaatgtcta
      661 aaaggtccgt ggactccttc aaaggggtga tttcgtctat gctttgctgg atcactagct
      721 tgggactgca gtgggccaag aaatcatcgt taatatcatc ctcgccgtcc ttttcacaag
      781 actttagact taaagaactg taattgctag aactaactga ca
//
LOCUS       KCKM01000349            1089 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5558apa ultra-conserved element locus
            uce-6187, sequence.
ACCESSION   KCKM01000349
VERSION     KCKM01000349.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1089)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1089)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5558apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1089
                     /note="ultra-conserved element locus uce-6187"
BASE COUNT          347 a          244 c          208 g          290 t
ORIGIN      
        1 cttcctcctt gtgtttactt tccctgcacc atacaattac aggaaacacg tataattttg
       61 ctttctaaat cacgaaaaac acatacttca tcaacatcta aatcatctct catctcagat
      121 gggcttgggc gggtgtcaga gggagaagac agacaggatg gaaaaaggaa gctatatcca
      181 ccatacgatt aacacggtct cctacctgcc tgaacttgac ctgacagctt attgccacaa
      241 agtccgcaaa gaaacactca gttcaagagt tacttaaagg catgtgctta ccaggttccc
      301 caacaataca cctcatctga aagctaccac aaaagaccta caacgctgtc tgacttaact
      361 tcacaatgca gagctgaggc cagggttttt ttgttgtgtt tgtttctatt cagtgatcct
      421 ccattgctag cctagaaatg acagtaggtg gaaacgctat ctttcattac acaaagtata
      481 aatagtgtaa tctatcagca ctgtcaatca agatgattga ttacaggctg tcatagagaa
      541 gagtgacata ttagaaaagt tttgttaaca atgcctattg ctagtcagcc tgccacagaa
      601 gctggtgatt aatgtgttgt cagcctgtaa tcccacaccc ctggctaatg aggcaggaat
      661 ttatcatctt tacagagtgg cagatgtcag aaggaaagga atccaagtgc tggaaacaat
      721 atactttttc ttaccacgcc tgacaagtct gacaggccta aaaaaccaca aagaagcttt
      781 gtgtaagcac aaacttaaaa cgaggaactt tcatttggca tctttgcttt aaatagtgct
      841 gcaaatcagc ctctatccct caaaaagggc acaataaaaa gctctatgaa ctctgaaccc
      901 atccttgaca actaggaaat ctcaggaagg gtttccatgg caggcaaaca gacagcttcc
      961 tttgcaagag aaccagcaag taacttttaa ctttacctgt gaacttgtga actactgcag
     1021 gacaaaaatt cttctgatcg gagcgtggaa ctcatgctac tataatgctt tatcaatgaa
     1081 ggtctcagg
//
LOCUS       KCKM01000350            1077 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5574apa ultra-conserved element locus
            uce-4171, sequence.
ACCESSION   KCKM01000350
VERSION     KCKM01000350.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1077)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1077)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1077
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5574apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1077
                     /note="ultra-conserved element locus uce-4171"
BASE COUNT          288 a          237 c          239 g          313 t
ORIGIN      
        1 taatcattca ggctctgctc ctaatatagc ccgagccctg cagaactggg ggttcgctgg
       61 cagcaggctt ctgcttcctt cataaactgt aattctgatg ttgcaggttt aattaagtac
      121 gtggcagtta atcagccact gaaaacagga gactccactg gggaattacc tgagtgaaaa
      181 cagaccaaac ataaagaggc tcccttgaaa ctctagcgct cccgcttcga cggtgaaatg
      241 gaaagaaagt tatcaaataa aatctgtttg cttgtggctg cactgtgaca gctttgttag
      301 tcctaacaga tgacaaggat tattcaatca atatagattt accctgagag ttttgctgtt
      361 ttcagacacc tccaggaaaa tgacagccat taaatatgta caaaggccag tccggggcct
      421 gtggcctcta gctttaagct gctgcctttt ctgagttatg tcaggatcaa ttttttctaa
      481 tagatatcac ttatcctaca tgataatcag cctatcatag cccattgatt acatgacagc
      541 ctgatttagg tctagtctag aagataagaa acacagagaa atctcttgcc tggatcgtca
      601 gggaattaaa atcgtcttcc ggaaccttcc cctgaagtta tttaatacgc actgaagcca
      661 agggagctgc tttgcccagt tgccctctct tgtgcatcac tctagctccc gtgtagtgcc
      721 ctggaatagc tgagagctac agctgaaggc ttgagtccac tatctgtatg gcgtctcatt
      781 tagggaaagg tcagctgagc tcttggttag cactggtcgt cgttcagtaa atcattttga
      841 agacactgct ggacttgatc gcatcatatt ttgggagatc tggtttggga ctgagtcagg
      901 tgagcacaag atacggtcag acagaaactt gacaaactgc aaagacagct gctgttacaa
      961 gccaagtgtg agacgacatc ttcctttcac atgactccca atatcatgtt tctatttgta
     1021 ttgacaacgt tctcttgaga tatcttgctg ctagtgctac tgtgtttatt gtggtgc
//
LOCUS       KCKM01000351            1002 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5590apa ultra-conserved element locus
            uce-2140, sequence.
ACCESSION   KCKM01000351
VERSION     KCKM01000351.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1002)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1002)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1002
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5590apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1002
                     /note="ultra-conserved element locus uce-2140"
BASE COUNT          346 a          217 c          140 g          299 t
ORIGIN      
        1 tccttctaat atttacttgg gttttgtacc ctttcattaa aaaaacaacc ttattgagaa
       61 cataagccca ttatgttcac cataaaaata catgttttca gtcctgtaca tgaaacaact
      121 caaaccaaaa acccacacac aagcaaaaaa accctacaag tttacaaatt tgatgctact
      181 gctacagata ctgttcctgg catagcttaa aggtctttgt ttctgtaaat tcaattgagt
      241 gtttctgagt ctagcaagag gttctaatta ttgttagaag cctaattagc atttagtatt
      301 acattacaac aactgcagca aaattgtacc cgttctccaa taaacagtat tcacagtgtg
      361 caatcaagct gctgtacgat gcaatgagaa ttaatagcac tgcacgacaa tggtaaatcc
      421 tacaactccc gctgtgtgtg tttaataatt tttcactcct tccagattgt tcccatcaag
      481 cacaattccc aagatcctaa tcagctttcc tccccatcaa tactacacag agatctgagc
      541 actgaaaatt atctgcaatt tcaaaaagtg ctttgttgca ttattaggcc actgacctaa
      601 gaggtaatgg gtaaatagtt tctgaaaaat gtccaaagca caacataaat taaagcttat
      661 agtcttgcct gctgttctta ccagagctgt aactgcaaac tctaacagtt tttacacaaa
      721 atccttaact acagtattat ttttcacaca aaaattagta caaagatgac aacatttata
      781 tttaaataac ctcttttact gtattttaca caaataatac aagttggaga accataagca
      841 cctattaaat gtattcacac acagggcaat cagagaacca ccaacatagt tttgtctgcg
      901 ttcatgcatg cagaatatgc aaaccgcttc tgcaaagagg ggcacacaca taaccataca
      961 cacagaaacg gaatcagcat tttagttttc ctttttagcc aa
//
LOCUS       KCKM01000352             725 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5606apa ultra-conserved element locus
            uce-1566, sequence.
ACCESSION   KCKM01000352
VERSION     KCKM01000352.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 725)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 725)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..725
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5606apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>725
                     /note="ultra-conserved element locus uce-1566"
BASE COUNT          214 a          143 c          121 g          247 t
ORIGIN      
        1 ttgccataaa aaccccacat ccttgtttac agaaatactg tatctgacat aaacttaggt
       61 aaaagcatct gtatttttct cgcatagtta aatgattagt tacaaattaa catccttgtt
      121 attaatagct acatcctaaa gccgtttttg gtggggggaa cattacactt ccctctattt
      181 atatcccatg tgtctgtcct ctgtcattct ctttctcttt aatcttgttt gagtgtacgg
      241 ctcactcgtc cttattttat tgactcaatc acaggcacac tgtcactttt tataaaacgg
      301 tcactgcaga atcacatcaa gcaaattctt gattctgcag tcagtaattt agtgccttta
      361 tggaattgca atttcagggc tcactgcttg tttttctaaa acgtacttta ggaattagtt
      421 actccagcca caaatcagtt gaatttatgc acagttgtaa tacagtttat ggcctcatgg
      481 tacattgctt caaaaacagc agatgtgaaa ttatgataaa tataataagt gtttttttgc
      541 ctgatctact ggagtagaga aggatctgga gcgtgtttac ctatcccata cagtacattt
      601 aatgtcttag tcaggactcc tgacaaaggc tgattaatgt cctcatctct tttattaaag
      661 ataagagtag cactgcagtc aggagataga aagcacacca taaatcttcg taaaatgagc
      721 agtca
//
LOCUS       KCKM01000353             689 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5622apa ultra-conserved element locus
            uce-4004, sequence.
ACCESSION   KCKM01000353
VERSION     KCKM01000353.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 689)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 689)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..689
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5622apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>689
                     /note="ultra-conserved element locus uce-4004"
BASE COUNT          173 a           86 c          132 g          298 t
ORIGIN      
        1 gtgtgcaatc tttcatttat gcatgggaga gattttagtc tttttacatt atagtatttg
       61 ttttagcctg ttgcgggtgt ttgcttattt aatacattcc gtcagggacg taaattacat
      121 gctttttgca ttattttttt ttccttagaa tctttttgtt ttgttcaaat gaagttgctt
      181 ttgcagcacc aaagacttaa tcatccattt tctataaaag gtagctactt tttcatagac
      241 ctcaagtata ctgtagtgta gagatgggat ttatggaagg tattaagctg aggctgtgtt
      301 ttagcttatg ggcaagtaat aaattgtatc atttatcttg aatgtatcat agataagctg
      361 ctatataatg attgccactt cagatagctg tgaaattagg tgattaacta gttctttctt
      421 agccttctaa tttctgtaca agtctaatta catgaaatag aagccaggtt ttgggtttgg
      481 ggttggtttt tttttatttt tttttaactt tgttttcatg tttgaagtgt cgtaactact
      541 atactgtaaa tgatggaaga tgattgcgta tgtttttttg gggtgtgtta tttgcatcag
      601 tattttatct ccattaactt tgagctcatc actgcatata agtggatgta ttgatgtaac
      661 ttaatttttt tatgttttca tattggcat
//
LOCUS       KCKM01000354             588 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5638apa ultra-conserved element locus
            uce-23, sequence.
ACCESSION   KCKM01000354
VERSION     KCKM01000354.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 588)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 588)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5638apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>588
                     /note="ultra-conserved element locus uce-23"
BASE COUNT          191 a          104 c           93 g          200 t
ORIGIN      
        1 tcacacggca caaaacattt tgtgttgagt ttcctaaatc aatgtttaaa gttgaaatta
       61 ctgcattgaa cgggttcttt gaaaagcaac ccattgattt taatctgctt gaagcaatca
      121 attactccct gtcctcttta ttccaaactg taatgaaaac taaactgcgt tgtcttgaaa
      181 actaaatgtg aagatgatca taaacagaat ttaaactcca tggattattc atatctaccc
      241 atttagattt gccatttcca ttatgagtac atttgccatg agcatttaat ggacatctaa
      301 aagggaattc attaaagcag gagctgttgg cagcacttat gggcttcaga ctgctttatg
      361 tttgccttta atagctcact attataaaag tgatatattg tgttcatccc attagtagtt
      421 tgcagaaagg tctgtaagac ataacaaatc cttttgagta ttttcagaat caaaactaaa
      481 tcacagggta tttttttttc aagcaacata ttatgaacct gacaatgtac cattttaggt
      541 catctaaact tcgatgatct tggccaagta agaatttaat gaccctat
//
LOCUS       KCKM01000355            1032 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5653apa ultra-conserved element locus
            uce-3517, sequence.
ACCESSION   KCKM01000355
VERSION     KCKM01000355.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1032)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1032)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5653apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1032
                     /note="ultra-conserved element locus uce-3517"
BASE COUNT          299 a          212 c          191 g          330 t
ORIGIN      
        1 gggtcttatc ttccttccct ctccttcaac ttattaaata tatcacaaca aaagcgtgct
       61 gctttgttaa tcactattca ttctcaagat caacttttct gggaaatacc accaccagca
      121 atcctggatc aactgcagca tgggaggctg cagccctact tatcagccta tttggtaata
      181 catgtgggct atcatgacaa gtgctgttca tttcagtagg tcttcagccc ataattaaaa
      241 tatatgaggc ttgttatgtt tctacttgca gtgcagggac atgaaaacag aatgtcctcc
      301 tcagatctta gcaagttact tctgatccca caacaaaggg aaaaaaaaaa ggcatttctt
      361 catattctca gttaattcag tctaaaagtg tcacacttat tcagcagcag ttaaaatagg
      421 ctatgatgag agcatgacaa tttccagcta aactagagga taattagaaa tgccccgtag
      481 caggcaagtc agtgcttcaa tttatttgct gtttattacc aagtccctgc cccttgggtg
      541 taatgactgt aaagcagcac ctgcagcttc ccagtgtttg atttagtgct gtaaatggtg
      601 ctcagagagt agattaagct ggaatgtgat caaaccttat ttgcaatccg attatacaaa
      661 ctgctccttg cactgaccag attgaagtaa tttccctata gaaacgttac actcactttg
      721 gtgtaaaaat gattaacatt tgctgactgt aggtcagcct ttcacttcca gtgtaattct
      781 ttatcaggca ggatgcccat ctttttcttg tgtttgtcac gtttgtgtac cgcgcggtat
      841 ttaaccaatg gatataatca ttttttttca ggtcttgttg atgaatgatt gtaataaata
      901 agcactccag cataagcaga ttaaaccatt tttttccccg tttgattgtt caacggtatt
      961 gacatgctta atgatctaac agagaacggc tacagaatga aggaatttcc atattttact
     1021 gaaaacggct gt
//
LOCUS       KCKM01000356             453 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5668apa ultra-conserved element locus
            uce-4835, sequence.
ACCESSION   KCKM01000356
VERSION     KCKM01000356.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 453)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 453)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5668apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>453
                     /note="ultra-conserved element locus uce-4835"
BASE COUNT          167 a           76 c           81 g          129 t
ORIGIN      
        1 aaaaaaaccc caacgtttca ggtcatcaga taactcaata aaatacaatc ttaaaagaag
       61 taagaaagca tgaataaaaa tatatacaac gatttcttgt gtagtcaaag tatcagcatt
      121 ttccatatag aacatccaat attttgctgc attttaatta aggtgtctaa acattatcac
      181 aaagaactgc aaattggtca gagcacgcag taaggaaaat taagctctaa aggcttttta
      241 tcaccatatt tcaggaacca agggtgtaaa atgttctaat ttgggatata ttaaaagcca
      301 taaaaggtct ttcaaaaaga ttaatggtac tttgcttgga tttaagataa gggctttagc
      361 tggttggaaa agcagggccc tggctagacc cttgaggcat tcatctttac agccacttgg
      421 aagatttgta aaagcgtctg cataacctca agc
//
LOCUS       KCKM01000357             800 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5683apa ultra-conserved element locus
            uce-893, sequence.
ACCESSION   KCKM01000357
VERSION     KCKM01000357.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 800)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 800)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..800
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5683apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>800
                     /note="ultra-conserved element locus uce-893"
BASE COUNT          254 a          130 c          139 g          277 t
ORIGIN      
        1 aaaaataaca accttgaaag tatttttcgt tccttttatt ttaagcagtg gcatatagtg
       61 ttattttctc tgcccaagga tttttacatc ttgaaatcaa agtagatatt tctaatgtca
      121 ctcactttaa ccacaagcat ttgcttttat catgttgtta gtcttggtca cttgcagtta
      181 attaagattt cagacgtaga gttgccaatc aacatactaa atgtacctct ctcttctgtt
      241 ttcacaagca ggcaccagga gattcaacag agtagttgat agctggtgtg tgatgtctgt
      301 ctcctggttt atagcctggt acaataatgt cattgcccca tgtggcaaat ggtgtaagct
      361 attgtaaaac tgtttgtcta tgtgattaag acattgcagc agtgtgcagc accagccaat
      421 tactttttta atttaattat agcagaaaaa agagaatagc ataatagaaa ttcttgtcat
      481 agggaatatg taaaatgtaa attgaagagc catgaaaatt tcatgcattg gcaggctgat
      541 ttgttcttat tttcaacttg ttatgaagac tgagtttctt aaatgcaata aaacaagaca
      601 tagcagtgtt tagtaattac ttagttctac atcaaaataa ttatatacag tatgtgtttg
      661 caatccactc tgctgcgtat gaatgtaaaa atgaacactt cagggcccat atcaattttg
      721 tcttttagac agtgtaaata aagctgaatc ttcaactttc aaattaaaac tgataacctt
      781 gggcaatcag ggcttttata
//
LOCUS       KCKM01000358             842 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5698apa ultra-conserved element locus
            uce-6621, sequence.
ACCESSION   KCKM01000358
VERSION     KCKM01000358.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 842)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 842)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..842
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5698apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>842
                     /note="ultra-conserved element locus uce-6621"
BASE COUNT          261 a          170 c          128 g          283 t
ORIGIN      
        1 tcctgacatc tatcttaact ttgcaaatga agcattttaa gaaagaacta tttagtctac
       61 taacacaaac ataatccttt tgaaaattgc accatttata tctactgtac ctcgcaggaa
      121 accttaagta taaatttggg aaagcaggtt tcccaaggtc acaacatacc attggttaaa
      181 aaaataatgg actcgtgtgc ctgtgagtac attaacaaca atgtccactt gccaagttgt
      241 ttaaggttat atacaaagag aaatgcaacc atattctttc actttgccat aaccttagag
      301 tttagcttta aatcatttct gaggaaaggc ttcctgcaga cttttcactt aagtagttgg
      361 aactacaact gcaaaacact gttgactggt ggactccaga gacttgttca ttacctgtca
      421 ttaaatgttt taaagtttgc ataattgatc cagccaataa gtcatcattg atttataggg
      481 gtctgtgctg aagagttgct tgttaaaaat tcataacact ggtatgtgtc tttacaatcc
      541 attagctgtt tacgtaccca cagtcctaag attgattgac cttggactga gattctcatg
      601 gactctgctt tttaaaaaaa cttttttttc atattttttt acacaagtcc acagtataga
      661 aaagcaatac ttcagccttc tcccttgacg gctatacttt gatttttttt cctctccatc
      721 aaaactgaaa ctttacttga aatgatgaat aaataaagca tactccataa acagctttcc
      781 actattattt aagcttgcga gctgtgctct gttagtctcc tttccccacc atcagattca
      841 ag
//
LOCUS       KCKM01000359             482 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5714apa ultra-conserved element locus
            uce-3785, sequence.
ACCESSION   KCKM01000359
VERSION     KCKM01000359.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 482)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 482)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5714apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>482
                     /note="ultra-conserved element locus uce-3785"
BASE COUNT          181 a           79 c           99 g          123 t
ORIGIN      
        1 cagaaaggca tcactgagag atatttactg cgtgtatttt cctcctgagc gtgtgcagat
       61 aaagggggga aaaaacaaat aaacaataaa agaatggaaa caaaattaca gaaatttgca
      121 aagtttgaca aatggtggcc aggagttgcc acaagctaat ggcttgcaat gattaataag
      181 agtaaaaata attgcatttc attaagattg atgacacccc atttaacctc ccttctcgtt
      241 tcagccctaa agtggaaaga gatgaagttc tcatctataa tagctcctgt aacattacca
      301 tggaaactga ggcagagatg gagtgtgagg gagctaatca gccaattacc gccaagatta
      361 ctgagatatg gaaaaactgg ggccagaaca ctcaggtata atcaaatctt ttttacagac
      421 tgattcaaac agcttaaaat taaatttgta atattgtgta catttaaagg gggcaaaaaa
      481 aa
//
LOCUS       KCKM01000360             673 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5728apa ultra-conserved element locus
            uce-2309, sequence.
ACCESSION   KCKM01000360
VERSION     KCKM01000360.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 673)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 673)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..673
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5728apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>673
                     /note="ultra-conserved element locus uce-2309"
BASE COUNT          228 a          113 c          148 g          184 t
ORIGIN      
        1 tgaaaaggag aggaagggag gatggcaaac ggacagtgtt agaagagctt ggaaaaactc
       61 ctgtggcttc attgtctctt taaagccaga gaacacaaag acaaacgcag ttcagccttt
      121 ctcccatgat ggaaaatgta aaccgttgac acagctccca tgtttaactt gtttaattct
      181 cattttaaat tcagtactat accagccgtg tgaactctga agatttcttt agtaatccat
      241 tttgtagttc cgaatcaaaa acaaagtgaa aaggtctgac acaatttgct tttattttta
      301 ggcaaatcaa ccctggtcat agttaataag gggattacaa cccagactag gtctttacag
      361 atgtaatgta aatcaagggc agagtataaa gaaactgatc ccttttgatt gaagtatggt
      421 aaaaaggcat agagaaacta gcagcagtaa tctgattgta tggcaataaa accaccattt
      481 tctgtctttc agataaaaat aatgtggtaa atccatgcag ttcataagat gtaaaggcag
      541 ataaagggtg gtgccatggc aacatataga ttagcttgat gttagaaatg acacgtctct
      601 gaaaggggtg ttagaaacta agggccttgc tccgggctgt aaggtattat gtgagaaccg
      661 cacaaaactt ggg
//
LOCUS       KCKM01000361            1044 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5744apa ultra-conserved element locus
            uce-7903, sequence.
ACCESSION   KCKM01000361
VERSION     KCKM01000361.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1044)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1044)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1044
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5744apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1044
                     /note="ultra-conserved element locus uce-7903"
BASE COUNT          250 a          259 c          263 g          272 t
ORIGIN      
        1 aaaactggct gtatagggac ataaaaggct atttctgagc tgtagattgt tgtattgttt
       61 gcacttctgc ttttaatggg aagagataac cggttattgt gatgcttctg ggcaaatacc
      121 tcatacttgg gaaaatgagc aagtgaagcc aaatgacaga gtgtaaacaa cgctccctac
      181 actcccaggg acatcacact cagacacccc gcgcatgggc gtcttccttc ccgaagcctc
      241 atcaaagggt taagcctgca aattgccttg ctgtgcttct gggacagcat gaaggatggc
      301 tgccattgcc acggtcagat atgacagcgc caatttgatg tgctgccatc aagggccttc
      361 taagagccga gcgccctgat ggttttgtga tgcgaacagt cgcatcgcaa aatggttttc
      421 ctctcccgct gcctctgctt ccatctgctg ctgggccgag gcacagccgg ctgcctgcct
      481 gtcacagcat gtattaaaat tagctgggga ggaggcactc agttgtgcta attacatttt
      541 aatcattgga aatgtgttgg caaatcaagc cttgattgcc atctcggagt ctgtctcctc
      601 cagcagagtg aaggggctgt ctgcattagc cagggcctgc tgggcccagt tctttcacag
      661 aagatagaat atggtgcctg ctggcccacc actgagactg ctttggcacg ttattaaaaa
      721 gccacaaggc ttgtttcaaa tcatctctgt gtgagctccg ctcattctca catccctggg
      781 tattccagcc acttggtact tttaactata tctttagttt accttgtggg ctaaaaaaca
      841 attttgcatg cgtgggcgga ggaagccaga gcttttctgc agctcgtggg gttgggaacg
      901 gagccggttg tcaaaacgcc ttccttgtca actgtaacgc cgcactgaat agcatcccaa
      961 aataactgga acttgcacag cccccacttc accacggaaa ggttcggtac aagccctggt
     1021 ttggtcagag tgacaggagg cgga
//
LOCUS       KCKM01000362             797 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5760apa ultra-conserved element locus
            uce-6534, sequence.
ACCESSION   KCKM01000362
VERSION     KCKM01000362.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 797)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 797)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..797
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5760apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>797
                     /note="ultra-conserved element locus uce-6534"
BASE COUNT          263 a          124 c          156 g          254 t
ORIGIN      
        1 tcattaagaa tcagcggttt ggcagcactt ctcttacagg ttttcggtaa gattgccagt
       61 aaaaatcaag agcacagaga acatgaagac ccttagatta agcattcttt taaatgcaaa
      121 gaaactggtt tgaagagatc tatgatctag ggaatgttaa caggaaaaat gtaaatagta
      181 cccactcaca tacatacagt ttatatattg acacatatgg cagcatgtgc atacaatata
      241 ttaaacatat atcatcaagt attcaatgct taatgtaaga gaactgatgt cattccctga
      301 atcagaggaa caatggtggc actcagccat ttcttttctg agtagctgct gtgtttttaa
      361 aaataaaaaa tcagggagct gctgtagcaa agtctgtagc attcacagca tgacaaacaa
      421 attagaaaac agcagatgca gcacaaatta agatgtattt agcacagcag cccatcagat
      481 gtgtgaaagt cttttgtata tcagctttgc aaggttgatg tattgcactt tagacagctg
      541 ataatgaacc cttctagcaa ttagaggtgg aagtactgag gatttgaaat tgtgctgttc
      601 ccagtagggg gagggggagc aaaaccctta gtgagaaatt tactgctttg tgtgtgtgca
      661 ctgggtaaaa caaagcaaat gtttcagttt atgcatatgc acattttgaa tttctcactt
      721 ttttttttac atttaattct tgtgtaatta ttatttcatt ttatgtgtca tttaataaat
      781 aaatatttct ttgttga
//
LOCUS       KCKM01000363             876 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5774apa ultra-conserved element locus
            uce-2335, sequence.
ACCESSION   KCKM01000363
VERSION     KCKM01000363.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 876)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 876)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..876
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5774apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>876
                     /note="ultra-conserved element locus uce-2335"
BASE COUNT          265 a          184 c          139 g          288 t
ORIGIN      
        1 aacaatctga atacattttt ttcatgttaa aatcttcttt tgacactgca tctgtcacac
       61 agccaacgtg tctgacccag atgcactgag taagccccac agattatttg tcagacaaat
      121 tctggaacct aatatttggg gggtttattt aattggtatg caaatgaaga aacaaggcag
      181 catttgtcct cgatacagtt gtcacttcaa attctggtaa cattcattat catgcttaca
      241 gatgtttttt ttacacctaa catctgtcaa tactacctaa accgcaggaa gttgacaaac
      301 ctgtgcaaac ttcctttagt ctccctctcg ctttctgtta tctgttccat gcacactaat
      361 tttgtgcatc tgaggcctct gctcgccaga attatgcctg cttcctaaca cctctgcctc
      421 cagagctttg gatttgaaat tgaacagaca cagagccaat ttatcatagg atgacatgtg
      481 tcatgttcat ggtataacca gagggaccta ctgtatgcac tgtatttatc cttttgttgt
      541 caacacggac aaagacaata ctggcaatag gcagctatta aatttttaaa atacagtaca
      601 tatacttaac tgttgttctg ttagggctga ggttttttta atgtagttct agctcatttc
      661 gtttaacacc agatttcctt tgtcagataa tcatctgtca ttcaggcata cagcatatta
      721 aaatatgtga gcaccaaata ccaatgcatt agcagcaagt cttcaaaaaa agcaacatga
      781 aaaccatttc atacatattc cttctgcaag taagaaatta taatcacatt taatgacagc
      841 ttacacgtat ttatatatac taatactgtt tgtagc
//
LOCUS       KCKM01000364            1034 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5790apa ultra-conserved element locus
            uce-7340, sequence.
ACCESSION   KCKM01000364
VERSION     KCKM01000364.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1034)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1034)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1034
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5790apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1034
                     /note="ultra-conserved element locus uce-7340"
BASE COUNT          320 a          212 c          200 g          302 t
ORIGIN      
        1 atgagctaac tgcctaaata gcaattttac cgaattatgt gatatatact gcatggaagg
       61 ggagaaagtc cctattcacc agagcccaca ccacttaagc aagcgctgaa gcatttttga
      121 ggtccaacaa ccttctaggg atctgtggag tagatctaac agcacaatgt gacaggatga
      181 gaacaaaaaa agtcctcaga aacaaatgtc cagaggctgc agtttatcgt gtgtcaggga
      241 ccccactctc ttgtaggaca caagaaatta ccagtaagga gaccattttt ccaccttctt
      301 gtgtctgtgc ataaaactca cacacagagc aaggagagga tacgcttttt gatttaccat
      361 tttcattttt agcaagcaac ccataaaaag gaatcctgtg cttttagaag atgacctata
      421 gcagtgggag cagtgccagc attacctgtg tttctagcat gcattaaccg tggagagttt
      481 tgtaaggcct tatcaacatc atctgaagtc aaatgtggaa gaggagctac aaaacaaaac
      541 aaaaagcaac accaaaatga aaaaaaaatt tgtgaattat ctttttaaac catatttttc
      601 cctgacagga tcgcttgaat gcgagtctat taacagtcac tttcagtctg cagtttggag
      661 ggaggcatgt gtgctacagc ttgaactggg gcattcattt attaaacatt atgaatgcag
      721 aacagttctg actcattatt gacagtgtgc gtgtggagaa gactgcaccg cactggtgtt
      781 gcaatgcttg ttgttttctt ttctttaaaa accatgttca ctttaacttg tttaaactgt
      841 tgcaaacctg caaaacttcc tcaagcttag aagacagccc ttaagctaag aattcactag
      901 tcccttcttt ccctttgaaa tgctagccat gcactacaac taatttgcat ttggatttca
      961 gggactgttc cttttttcca tgaatttgca gaaattttaa tcaattcagt gaaatcttcc
     1021 tcatcctatt caga
//
LOCUS       KCKM01000365            1298 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5804apa ultra-conserved element locus
            uce-671, sequence.
ACCESSION   KCKM01000365
VERSION     KCKM01000365.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1298)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1298)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1298
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5804apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1298
                     /note="ultra-conserved element locus uce-671"
BASE COUNT          355 a          315 c          287 g          341 t
ORIGIN      
        1 ccctatcagg tcaacagaat ccaaacctct ttaagcataa cgaaagccaa aataacacca
       61 aaagcttcaa ctaaaaataa acgtagctta cttacttgca gtactcatga catttcttcc
      121 caaagtatta gtattgttat cactgctact tcggcttaaa ttcatgttgt ttgtggcatt
      181 ggtacgcgct atgtttgcca cccttcgtac gaaggactcc aggctggaag tttctcgaga
      241 tgataagttt ggaacgcttg cgctggagct catcggtgcc ccagcagcca gcaaagaact
      301 gaccgagagt ctgttactcg ctgaagagct tagaggtcgt tgagaagctg cttctttatt
      361 cgtcagttcg gagactgagc tcacgtcagg agagcttacg ctaacaattc ccatggatat
      421 agcactggac tcgcccggag cacggattga gttctcagga cctaacttcc tctctgcatt
      481 ctcgtttccc atgtccgctg tcaaggtgct ggtgctggca ctggaagatg accctacttc
      541 ggcctgcggc acgctatcag cagaagacag aaccacaatc ggttcatgga cgtcagggcc
      601 tgaaactata ttttgctcca ttacactttc tgatctccgc tccattttgg tcgaacccaa
      661 gctgatgtcg ctgctactgg ccacgctaca cacagaactg ctgcttcctt ttctacttga
      721 ggagcctgca gcagcagtcg tcttgtctgg acagttgttt ttcaccaagc tgctccatga
      781 ctgcgttgtg cctgaaacag tggatgaaac aggtttgggt gatgccgctg aatcagggtc
      841 gtaccctggt gcaagcttga ggtcaaactt tccttctgcg cccatacggt aagagttaga
      901 gccaccagca tcccaggtga catcaatcca gcctggaaag ggacaggagt ttgtgagacc
      961 cagcagaaag cagacaggag cgcgtcagac agtagctcca caatgtggga tcagattctc
     1021 ataagggctg catgtaccaa ttaataaaat cgctaaataa accttaacgc caattaaaaa
     1081 ggaagcattt aaatccaagc gatccagtgt tttaaaatgc tgttaatgct gaggcagcaa
     1141 gcgcaaccag cctctacctt cagggtccca ggattcagtc aaaagtaaag tttccttcag
     1201 gaaggaacct gacttactag gatttctcaa aatttcatta ttagattttc taataacaga
     1261 aatgtgtatt aaaatgtata attataactt gactaatc
//
LOCUS       KCKM01000366            1013 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5820apa ultra-conserved element locus
            uce-5196, sequence.
ACCESSION   KCKM01000366
VERSION     KCKM01000366.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1013)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1013)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1013
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5820apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1013
                     /note="ultra-conserved element locus uce-5196"
BASE COUNT          342 a          176 c          176 g          319 t
ORIGIN      
        1 ttcagaacaa aaacattgct tacttctggc atttcgacct tttaaatgca atttattcag
       61 ctgtaatttt tactatgtta ttaagtgcag atgaaagttg ttaaataatt aatttatctt
      121 ttagaatgac aaatggtatt gagcgatgag tggttgaatg agcaaggact gaattgcaag
      181 cttttccatt aaagataaca aacaaatgaa gacacaagtg aaatgaaggg tccaacatca
      241 agcacatttt gttaagacta aaggagatga gtgtttctaa aaggaaagca ggaaaagaat
      301 gactaggaat aaagaaaaaa gatacattgt gagtacagtc tttcctctta gagcattgtg
      361 cacatcattt ttactctaag attgcttttc acaagcacat tgctgagtaa ccttttatga
      421 tctaatgaaa gaagtccata cctttcctga tccctccatc agtagcacac gtgtaatcac
      481 ctgttgtcag taggaaacat gttccccctc ttctgttttt gtctcttgta ctagagcgtc
      541 tgatgggagg gagcctttca ccaggtgaga gtggctgctc acttcctgca ctgtcttcac
      601 ctgataacac tggttaaagc accatgccca tttacagaca ataatgaatg aggaaatgag
      661 acatcacaaa gagcttatgc tgaatgccgg atattcccat cactcaaaaa aatcattata
      721 aggtaaatca ttagaagaaa acaagactgc aattcaccat taatcagtac aaaatggcaa
      781 aaagtatatg ttttattcaa gaacaaatga tcttttgatt ttcctgttaa tcttttaaat
      841 ctcatagaaa attatactaa actaacatga aatacgaatc aaattaaggc ccagttattt
      901 gcctattatg gactttaact ttttggagta cagtcagctc tggttatttc aaacaaatat
      961 ttagtatttt ggctgtcctt tttgctaaac aagaggtcat gctagtcatt ttt
//
LOCUS       KCKM01000367            1050 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5835apa ultra-conserved element locus
            uce-2142, sequence.
ACCESSION   KCKM01000367
VERSION     KCKM01000367.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1050)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1050)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1050
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5835apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1050
                     /note="ultra-conserved element locus uce-2142"
BASE COUNT          302 a          219 c          181 g          348 t
ORIGIN      
        1 cacgggccaa aattttttat ttttcttccc ctcagtcccc caacagatcc caaaaccttg
       61 aggccgtttt tttttttgga cccaccataa agagcaaaca gtgaccactg tgcaagccaa
      121 cagagtttga agaggaaaac aaacaggatc caaagaaaac ttcccaatag cgatccttct
      181 gatggtctca atagaaaaca tttgttatgg agtaataaga atttgcataa ttttggggaa
      241 tactttgttt tcaaagtaat tctctctttc acctgcttag gacttgacca tgtatggctt
      301 tagttaagtt ttgttgatgg cggctcatgt ttaaccaact gtttttaatt tacaaattaa
      361 acttgtcaga agtagaaatc cttcccttgg aacccttcca atatgtcaag aattaattct
      421 aatgaaaacg gcattgccta aatgcaggat ggccagttac ttactttatt tacacaaagt
      481 ccttctcagt ttctttgata aaagcagcta aatctttttc ctctttcatg ttttgtcagc
      541 acttgattcc ttttgtcccc tggctatttg cctagctgtg gacaataagg caggaagaat
      601 agaagcagat tgttggaatg gccctcaata aacctaatta tgacatgttg actgcactca
      661 ccatgacata ttcaggagat ccaggcttat tcaattaccc ttgccaggtt tctctttcag
      721 acctcaagtt atcctttgac tgtttgtatt tctgaacagt attcatgttc attgtgaaag
      781 aaaatccccc ggacttggag gggtttctaa gttgatgctg ttattgtagc taatttttat
      841 taactgaatg ataacatgat aaagaaatag acttttgtta tgtaataaga acaaatcagt
      901 gtgtgcttaa agttacacct ttctttcctt tctttttctc ccgcagaaga ctgacagcac
      961 ccataacccg cgatgataaa cagcaccgtt ttctcgactt gtatttctag ttcagtgacg
     1021 ccgaatatta ccctcgccaa aaacttttgg
//
LOCUS       KCKM01000368            1101 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5851apa ultra-conserved element locus
            uce-3619, sequence.
ACCESSION   KCKM01000368
VERSION     KCKM01000368.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1101)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1101)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1101
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5851apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1101
                     /note="ultra-conserved element locus uce-3619"
BASE COUNT          310 a          214 c          238 g          339 t
ORIGIN      
        1 aaaaagggtt gatttctgta ggaaagctca ttgaggagca aattatccaa tctctgtttg
       61 gaattccatc tgtgggtcat tgtacaacct tgctgtctgg gtgtgcttct caatgtctta
      121 acaatgtcca ccttagatga acaaccacgt tttctttttc ttgaatagtt gtcaaatatg
      181 caggcttttc cattttgttt tggttgccat gccacaaact ttgattcatg taacacaatg
      241 aagtggttga aatttgggga ggaaaagctt tgcagtcgga tcatgtttgc tctccatgta
      301 aaatgatgag cattcacttg gtcaaatagt aggaaaagac gcctttgtct ggcctcagtt
      361 tgaatttata tcaaatcttt gatggacatt ctttgtttcc taaagaaata cttactggtt
      421 gctgtaggtg aagatgcctc accttcagtg gatgtagtga tgggtttagt atctgtcatg
      481 gtcagggtca caggtcgcac cgcactgtga tggggagagg gtgccaaaac cggtgtaaaa
      541 tggccaggca ctttccctac tacttgacca ctgctgttag gctacaaaac aaaaccaaaa
      601 gaatgccttg tgaaacatac aaattgtgtt taaggaacct acccgcctat cttagggttt
      661 tccagaatgc ccatcaccat agtacttatg tgttggaatg tgccattctg acaaaattat
      721 taatttcttc atttttttca gcaggcagat tccttctcag ataggtagta catgcttaag
      781 cagcagtgct tttcagtgag cttcctttct ttctggatgc agcatgaatc agaatgtttc
      841 aaaatatatt tgctgttcac acagtggctg tgaaccacag taaatcccac gacagcagga
      901 ttaaactgac caggcacagg ccctaatgta tgaggtatta agagcaaatg aatgatgcaa
      961 aacctctgtt ttcatatgcc ataccactct ggcttggaga gtaaccaaaa cttgaccaca
     1021 gttttccaca gagattacgc atactggaag gctaactaat aattcacatc tttgggagta
     1081 ggggagagga ttgagatatg a
//
LOCUS       KCKM01000369            1224 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5865apa ultra-conserved element locus
            uce-334, sequence.
ACCESSION   KCKM01000369
VERSION     KCKM01000369.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1224)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1224)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1224
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5865apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1224
                     /note="ultra-conserved element locus uce-334"
BASE COUNT          361 a          253 c          235 g          375 t
ORIGIN      
        1 atatattgca ttttacctgg atgcatgtga atataaaata aataatcaaa tattttaacc
       61 cttatcgaag cctcttctag caatgctgtg ctccttttct gactagcttt gtggcatttg
      121 tgcatgggtt taacattatg tccaagttac acagcatgtt aatgaatgat cccacgttag
      181 gcctaggaac tccgtacttc tgcagttagg aaaccgagac tccaatccag tcgtggctct
      241 tgtacctacg cataaaagac attaattttg ctgattaggc ttttaaacct cagcataacc
      301 aaatggcaag cagaatttgc atgagcacct gcagatttag gtatcctgtt gttacgacgt
      361 gttgtctgtc aacaatttat cagttgtagg catttaactt acactcactt gagcagaatt
      421 aagagtgttt agtttcctca taagagggca gccagatatg taccaatttt gttttaactg
      481 tggagagcag ggagcgggga gcgaagcggg gaagggatcc aggaaggcct aatcaatcac
      541 tgacagatta cagctaaagc cacttccata cccattaaag caggacaaat gcagaattgc
      601 aactgaacaa cttctagttt taagccaaca gtgggacttc ctagttattt atcaaagtca
      661 ttgctggtaa gcagcatgcc tcactgctcg attgtacttc acagcagaca gagctgactg
      721 aagcttcagc catgaaagaa gtgtttatgc cctcagctgt ggtgctgtca gccctctgga
      781 atttactgta aatcacacag cttttattgc aagatttagt agctgatcct ctgtgggctc
      841 tattcactgc aagcttgtta ctatttggat gttagcctca gtccataaag ggacttgcta
      901 cacatcatca aacagcagcg gaaaaccaaa ggtttcattt ttcaattttc taaaccctaa
      961 actcctcaac agtcattgaa tttcattgca gaaagtggaa gtctacttta ttatggtact
     1021 caatttcccc aatggagtta tacacttata acattacttt tatttccaat gacaggatct
     1081 ggccatctgt cctggctgta atttcataac acactcacta gtttttattt taagggaatt
     1141 tctagatatt acactgagct tgtgacaaaa ttgtaatgta gatataaagg ccacaataat
     1201 gataactaca ttcagtgctg ccta
//
LOCUS       KCKM01000370             953 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5881apa ultra-conserved element locus
            uce-5932, sequence.
ACCESSION   KCKM01000370
VERSION     KCKM01000370.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 953)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 953)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..953
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5881apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>953
                     /note="ultra-conserved element locus uce-5932"
BASE COUNT          300 a          219 c          170 g          264 t
ORIGIN      
        1 gcaataccct tgaaaaatga atactaatat ctcaatacta aagcggagcg ggcgatgtat
       61 ttcaactttg aaaccgcttt gcaattacac atgaatcccc tcagcctgaa cagcaggtct
      121 atgaagaaag gattgatctc ctttaatgat gaaactctgg caccgtggtt ttatttttca
      181 caacacggtg cagttaagaa ccccactgtt attatgaaaa tttcctcggc aaaggagctc
      241 catcacatta ccagtgcacc aattcatcat aacgtgcctc gctcctgctc atcaacaagt
      301 ctgagtgatg aaaagatcca atattatcct gacagtactt catgcacatt ctcaatcaca
      361 cattattaca gcatccatat taattttcac tgacacgcgt cctaggcctg ttcaaattag
      421 gcaaaccaac gagggggagt tgatgaaata ccagcatagc cacagctcat tgcattccaa
      481 tttgcatgca aatggtttat caggaaaatt ccattcccag caaccagcaa gtgaaaaaca
      541 accgtaatct acacttcagg gccaccatac agagcttaat gaatcgcaaa gagagaagga
      601 agtgacagac ctatgagagg atcgatttcc actggcagct ggtaaggctg gtcttgtata
      661 gcaccttgat gagctggaat tcaggaaaga agattttaaa actccacatt ttttaataca
      721 tgaagtcaca tatattttat aaatcaaagc tatgttcgtt ttttttagct atctaagatt
      781 cttctccatc agtcgaatta aaaaaaatcc ccaaaatatc caggtgcttt cacaggctgc
      841 ttattaaaca tttattttag attagtgctg ttctgaatgt atgccatcag cagcagctcc
      901 ggtcctgagc cataagctcc agcagatgct ttactggcaa cctctcctgt cgc
//
LOCUS       KCKM01000371             778 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5911apa ultra-conserved element locus
            uce-3008, sequence.
ACCESSION   KCKM01000371
VERSION     KCKM01000371.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 778)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 778)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..778
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5911apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>778
                     /note="ultra-conserved element locus uce-3008"
BASE COUNT          227 a          154 c          156 g          241 t
ORIGIN      
        1 gggcgggcgg tgccctccag ccaggatgct ccggagggct gccgggaaac atgcggctcg
       61 ttcggagcga tgccggtggc gaggaggaag cagctcacct gcccgtcgag ctcctcattc
      121 gtgcctgttg gatttaaata gctgcaacag aaagacaagt gtctggaggt gatggtgttc
      181 tgctcttacc aacagatgac aatcatgtct tatggttttt gatttgacag aatggttcat
      241 ttcatcagct ttctagcagc ccatttgatt caatttccct ctgcagtgtt ttactgaaaa
      301 tgacaaaaat gttcttttac ataaagcctg cgagtctgtg aacgaacata aatgtgctgt
      361 gctgtttaca tactaactta attgtaattt aaatgccctt ttcattccat aaatatagcc
      421 ataggctttt catttccttc aagccttcag ctcagagagc agtttatatg taaactggag
      481 tcagttgctt cataaagtga atttctggag gaaataatat agtatatatc aaaatctaga
      541 taggtaatgg gaaattgatt gtgacaatac aatattagaa acacatctcc ataatatttt
      601 atttattaca ctttccacct tttgctgtca agggaaaata tttcatcttg caccgcgaac
      661 tccagtctgt agagattttg acctcaatat tctcacacaa atgaatatag tgtgtaaggt
      721 agcacaattt tccctgtgta aaatcatgca taaaaaacaa ttcatttaaa gcatctaa
//
LOCUS       KCKM01000372             761 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5926apa ultra-conserved element locus
            uce-557, sequence.
ACCESSION   KCKM01000372
VERSION     KCKM01000372.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 761)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 761)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..761
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5926apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>761
                     /note="ultra-conserved element locus uce-557"
BASE COUNT          251 a          121 c          135 g          254 t
ORIGIN      
        1 ctcagtatgt taaaatcaaa atatacctct gggttcagtt ttgctattaa tttcagcatt
       61 tacagaaaaa taaaaactat tacagttttc ctgctaaatg caatttcatg aataataagc
      121 agagtttgat agagttttgt ttaatttaat aaaaacctct gcagaaacta acggcactag
      181 gcatactgtt ttaattggca tgattacatt ttaattggca tgaaaaaaat taaagacaag
      241 gattttaact tctaacaatg gtaaaataga gggatatggt ttttaatatt actttcatct
      301 aaggtgaaca gtgtggaatg gaaatacatt agaatgaaat gtcagtggtg cgtacagttt
      361 aatctgtgaa attttgtccc ctgtgctgaa tattactctg tctcaattgc atattaaaca
      421 accctatcaa ggcaggcatt ggcatctgct gtgctgacac aaattgtgaa ttaaatgaaa
      481 ttgatgtcct ctgtcgtata tttatgaaga cggaccattc tctgaagtat tctgtttatg
      541 aagaatttat gattgcaaac tgttccagaa caaaaaagtg gcaataaatt cttttttgtg
      601 accctaccct ccaagggcat tgatttcacc tcctgctgct acttttgtta cagcataaaa
      661 acaatagcta gtgctggatt ccactgaggg tcttcaaatt atcaatattt gcaccatgaa
      721 aatagaaggg cgttgccaag aaagcatgtt tttctgttat g
//
LOCUS       KCKM01000373             876 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5942apa ultra-conserved element locus
            uce-2459, sequence.
ACCESSION   KCKM01000373
VERSION     KCKM01000373.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 876)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 876)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..876
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5942apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>876
                     /note="ultra-conserved element locus uce-2459"
BASE COUNT          248 a          166 c          168 g          294 t
ORIGIN      
        1 aattccatta gtggttttgg tttttgtttt caagttttca ctgaaaataa gattggaatt
       61 ctgtatttga cttgctgact aaggcttttt aaaatgttac tagcagtctt gtacctctaa
      121 tagagagtgc taggagaagg agagtctgac ctactcttac aaaagaaaac aaaactgaga
      181 aagggtggaa tagaggaaca gagagatcca aggtttccca ccgtatagta atggatatga
      241 cctttaatat tgaggccttt ggatcaaatt taagttggca ttaaaatttt ctaataaatt
      301 ccctgctgaa tctcagagtt tttttcctca ggtttaattc aataaggtca caataaagca
      361 agtgctgtct gtgctattgt aattgctctc agcaggctga taatattatt gcagagaagt
      421 gccagctact gtgcttttat ttctttcttc aagcactctc cttccaacat gcttgctccc
      481 cttgctctca ggtctcccct aaataggcag cgaagctgtt ttaaatgctg tttgcttctc
      541 atttgaacat gtttttatag taatgctttc ctgagtctct tcaacaaaga gtacaaacat
      601 agcctgtctt actgcagaat aaccgggaac ttatatttcg tttccttaat tctcattcaa
      661 cctttatgca ttatattcag cctctaaatt cttagaagtc ggcatttcta aacgcacaac
      721 atttagttcc ttttggcttg gtgcttttag gattatggaa cagacgtaca ggtaaaggag
      781 tttctcacag gcacgtgggg agagacactc aatacccgct gtcctgtgtt tcataaaaaa
      841 tgacaaatgg cagctcatca cagtgagtgt atttgg
//
LOCUS       KCKM01000374             818 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5958apa ultra-conserved element locus
            uce-5369, sequence.
ACCESSION   KCKM01000374
VERSION     KCKM01000374.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 818)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 818)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..818
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5958apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>818
                     /note="ultra-conserved element locus uce-5369"
BASE COUNT          248 a          170 c          142 g          258 t
ORIGIN      
        1 aaacatcaag atcaaaacat tatgcaagtt aaatttcctt gaaaggttcc cagcaggagt
       61 tttccttttt gtttgtgcag tacgcgattt cctctcaccc acaaaaaaca taccaagaat
      121 gtgcatgtgc cgctaacact aagcagcact tccttaatca ctcatttcca acaatttatg
      181 gatgatcagt ggcaaaaacg agcaaaaata atgaaagcac gcaatgaaag ctcattgaga
      241 caaaccggct tggacttcct actcatttct gtgtctcttt aagattgggg tctgatacaa
      301 attagccact gggaaaaaaa aagtcatctg gtcataaaat acagtacagg gtcactttta
      361 tgtaagtttg ccaaaaggga cataaaccag gacaatttca aactgtgaca caggatagaa
      421 gtatattaaa aaaatctttg ttcctcctcc attgtgctgt catgttgctc agctttatag
      481 acgttctgag caccagctct ggcctcttcg cttccacctg gtctacctaa ttaattaagc
      541 aaggaagtta cctcgaattt ttgtactatt tgtttttatt atcatgcact tcttttgatg
      601 ttccaggagt taacctctta atccacagac tctgtgtgtt gtgttctgaa cattttggga
      661 tgtctggata atttggataa ttggtcagga tgttgctgtc gctcacgtta aactttatgc
      721 cacgacttca agttcaaaga tcagtattaa ggtacaatac ttcataaagc ctttttaaaa
      781 ttctacactc ctgattacgc aatacctagt tattccag
//
LOCUS       KCKM01000375             875 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5973apa ultra-conserved element locus
            uce-2089, sequence.
ACCESSION   KCKM01000375
VERSION     KCKM01000375.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 875)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 875)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..875
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5973apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>875
                     /note="ultra-conserved element locus uce-2089"
BASE COUNT          249 a          167 c          169 g          290 t
ORIGIN      
        1 ggtcttttta agtgttaggg aagatggatg ggtagtggcg agcaactctg agaaactgcg
       61 cagcgttcag tgtgtctagt ttatgaaatg gtcacagcac attatcctac ccccacctaa
      121 ataaatacct ttcaggacct tgatgttggt gcctggcact gtctcaataa agttcacaat
      181 gccagctatc actatattag tgataactcg taggagttga tagtgttgta taacacagag
      241 cagcttcatg ctgtcagtgt catgcatctt tatcaggaat acatcataca gacaatggaa
      301 attttccata ttctttaaag ttttgcgttc tgtatattcg gttgttagac aaatagagca
      361 agctttgctg acttcatttt cattcttggc agcatgtttt tatcataagg cagatagtca
      421 ttaatttaca gaatcaacgc tgggaacagc ttttgtgatc tcatattaaa ttttcccctg
      481 aatccgcccc ttggcaaaaa ttactcacat cgttaaaaaa tatttaatta ggctgtagtt
      541 tatacccagc tcactgggga aatgttggaa ttaatatgat ttgcatgaat tctgtttctc
      601 tttttctgtt agagattagt tttgaattca gttcagaggg tcgctgacac tgccaaggac
      661 tcacaattgt gaaggtcaaa caggtagcaa atacttcccc tgggtagctt ccctgaaaag
      721 acagctcaaa attgctttta attatgggtt acctaaaagg ccacttgctg tttttatttt
      781 tccacagatc tctgaaacat tatgtggctg gaagttctag gtagaccaca tcagttcaaa
      841 actgaaacaa ctgaactcat attttcactt ctttt
//
LOCUS       KCKM01000376             985 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 5988apa ultra-conserved element locus
            uce-394, sequence.
ACCESSION   KCKM01000376
VERSION     KCKM01000376.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 985)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 985)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..985
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5988apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>985
                     /note="ultra-conserved element locus uce-394"
BASE COUNT          249 a          190 c          271 g          275 t
ORIGIN      
        1 atgagtgtct ggatgagcag tgcttcagta gcacaaggag cccgagctcc ggttgggatt
       61 tggctgtgtt aaacaataag aaaattttct ctgagaggca gcctctgccc ctagaagctg
      121 agctctggac ctgtgcatgt gtttggatgc ccctaaggaa gcaaaacctt agttagagag
      181 ggcttttttc aaccatttcg agggtgcaag catatggctt tgagtgtgtg aaagtactgg
      241 gatggctgga tatgaattcc gcatgggttt gtgtaggatg aggtctgaaa cacagctgac
      301 ccctgagacc agagcttccc atccgtggga gacgtgcact ggtcgacctt ctgggccagg
      361 ggggtgctgc cccctctcgt tgcccgaccc tgttctcatg gattgggtgt gagtgatttt
      421 ggggcaggat ttgaggctgg ccgtggtggg gcaggaagct gagaaatgaa atgagccgac
      481 agtcttttat caggtacatc ttcgtttttc aagtgcctat catatcacgg aaactgctct
      541 tcaagagccc tccatttacc ctctccccta attaaatgtg cacttcatta atgtaaattg
      601 ggggtttaat gctcttgttg aaattctgaa gaaagtgcta tggccttgcg aaatgcttaa
      661 gcatcattgc aaattagatt agggaccaag aaaggcagta aaattagaat gataatggtt
      721 gatgtggctt cctgacaggc gtgactattc agggatcaat gggatggaga acagtttccc
      781 ccagcctaaa gcgaaaggca gggacagacg tcagcctaca gatgtggctt ttggaagctc
      841 tttcaattag tttaatttgg taaatggtgg ggatttagag gctcttagcc agtcatacaa
      901 gacaagaata cattgaaatg tttttcgctt tttaacataa aataggattg gctgcatttg
      961 catttcttaa cgctggggtg gagag
//
LOCUS       KCKM01000377             922 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6003apa ultra-conserved element locus
            uce-4128, sequence.
ACCESSION   KCKM01000377
VERSION     KCKM01000377.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 922)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 922)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..922
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6003apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>922
                     /note="ultra-conserved element locus uce-4128"
BASE COUNT          301 a          190 c          181 g          250 t
ORIGIN      
        1 caccatatgg cagcaatcct gtgtcagcag caccatgcaa tagtttttca gaaaaagaat
       61 gaagagtaag ttctccactt gaaaccaaag agagatttat cccacagaag tatgcaacac
      121 atcattaccc aaaccagaat ggaggcagga catcagcact ccaagtttta tgggaacttt
      181 aacagtgaag ggtcagggat tcaatctgat gtccaagcaa aatgccagtt acagtttgtg
      241 caatgccatc agacagataa tgcagttttg ctgagaaact attaatttaa tgttatggaa
      301 gcaaaatatt cagctacgag gctccattat acttggagcc tttgacccta gtttatccgg
      361 gagttcaagc cctgataatc tatgtgcttg aagctcatct tggtggataa tggaaaattc
      421 tgctccattt cctctgggac ttcatgctca ttagtcacag cacaccaatt aaaagctttg
      481 ttagaaaacc agaggaatgt gacacagcac atgtacaaac caggaagctt cattcatata
      541 taacatggat gaatggctct gtatggaaag ccaagcatcg cattagcagg tcgtgtgcat
      601 cagcatgcaa gatcaacaaa agacgtgcaa gaatttttaa gtcagcactc tcagtaagca
      661 acagattttc acttggaaca atgagagtta cagtattttt cacagcctac accttccatc
      721 taaccaaagg taatgtaaag tattttaaaa gttattcttt tttgcattgt tactttggca
      781 atcatctagt aggaaatcac gaaacattac caccagctac cgaacagatt cttttcctaa
      841 ccgtcagagg tgaagctggg gttagtgccc tggcaagcta cttatcagct agaatagcaa
      901 ccattttcaa aagggattat tg
//
LOCUS       KCKM01000378             544 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6019apa ultra-conserved element locus
            uce-697, sequence.
ACCESSION   KCKM01000378
VERSION     KCKM01000378.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 544)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 544)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..544
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6019apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>544
                     /note="ultra-conserved element locus uce-697"
BASE COUNT          175 a           90 c          119 g          160 t
ORIGIN      
        1 tatagcacgc acatgttttt atgctttgcc aattacattt gaaataggga ctgtttgttt
       61 cagtccctct aaaaatgagg cgaggatgag aaaacaacct atttccttat taggttcagg
      121 agtcaaagga ctcagccagg agccgcaggc ttcaagagca tagaagatta agacatatat
      181 tggattcatg atggagggca caaagttcat tttcaaaata aaacagaatt ttattcatat
      241 tccttttaaa attcagattg ccatttgcca gctgacctgt gacatggcag cagtgtatta
      301 cattttcaat gagcagtctg tctggagctg gcaggagagg aaactgcttc ctggttgagg
      361 tttttttttt tcaccaccac ccttaaatag taagaatttg tcaggattgt tgtcagaatg
      421 ggagacagtg caaacaggga cagtgtagca tatttatttt taataaggag acatgcagaa
      481 tagcaaagtc actggcatta tgcactgaat agggctaaaa aaaatttaaa acagagctag
      541 attg
//
LOCUS       KCKM01000379             721 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6034apa ultra-conserved element locus
            uce-7452, sequence.
ACCESSION   KCKM01000379
VERSION     KCKM01000379.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 721)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 721)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6034apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>721
                     /note="ultra-conserved element locus uce-7452"
BASE COUNT          214 a          141 c          140 g          226 t
ORIGIN      
        1 taatcaataa aataccttct tagggtgcaa ttgacttttt tagacttttt gtctagctta
       61 aacagaagaa gttaatttga ggatttttac agtatttctt cccatttaca aacaggaatg
      121 ccacggggta aagcaattac tctgatttac tgttttcact ttgatggaac ataaagatgt
      181 agcggggtct caaaaaagca gtaacttaac aaactgtgct cctatccaca gacagataga
      241 gtacctactt tgctatttca aagagtttac ctccaggcag cagcacagag caaacatcaa
      301 tcaatgacat gtgtctaaga tgagattgat gtttactctc ccagcttttc atcttacatc
      361 caataaatta tttttccttc accaaaatgc ctggttaaat ttcatttttc actttgcagt
      421 atcagtttta aaactttagc ttccagcaat tttaaagcca ggattcattg acgcttcagc
      481 ttttacagcc tgtttatgat ttgtgttaac catgaaacac caccgtccaa acatgaatat
      541 gatcaggggg agctgagctg ggtcggccgc tcgcatggtg gcaggtgtgg gctggaaggt
      601 gggagattgc tttaattatc tgcctggaaa ttctgagtcc ggaaccggga gctatatttt
      661 caggggcaga tatatcgagt ctaccaaacg tatgcatata tatacatatc agatctgcaa
      721 a
//
LOCUS       KCKM01000380            1070 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6050apa ultra-conserved element locus
            uce-1828, sequence.
ACCESSION   KCKM01000380
VERSION     KCKM01000380.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1070)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1070)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1070
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6050apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1070
                     /note="ultra-conserved element locus uce-1828"
BASE COUNT          262 a          281 c          216 g          311 t
ORIGIN      
        1 aatgggaaaa tttcttaaag accaggatct ggtttgaccc ttttgtgcaa gattggggtt
       61 gctaagccta acaaattacg ctgtggaggc tgaacaaggc cagagacatc ccaatcctct
      121 gctctgtgag gctctactga gaacagggtt tggcccatgc cgctcacgga ggagaaacac
      181 agtctgggac ctgctggacc actgctcccg caaactccag atttgacaac tgagtctggc
      241 attggtacca aattccttgc tcaggagtag cagcctggag cctgcggaca gcatccctct
      301 gtgtcacaaa gtccgctcgg tttctccagc ccaccctcca ctgatgttct cctgcccgtc
      361 tgtcctgctg ctccccccca ccacttggct aatttctcga gcaggatatg ctaatcctgc
      421 atttccctgg taattacttt ccccaaaact gtctcagaaa tccaggtgct gttcttctcc
      481 cagaccaggg aacagagatg gcgaacggct ttctcttgat tgtgtcgatg ggagatgatt
      541 ttcaaggtga aatttctagt tcagttgagt cactttcatt caaggcgatg agcaaaatgt
      601 cacccccaca ctgaaccaca ctcaatgtgc tgttctccta ttgcatttaa atttactcca
      661 cttttccttt ctgacacctg tttaaatcaa tatcttcctc tccaggtcgt gggcagaatg
      721 tgcctggtct ctccgcacag cgcttctcaa atccactaaa atcaacacaa taattgaaat
      781 attttcaagc tgattacacc gctgcctgag gctaggctgg ttgctaaggg taagctccct
      841 ggttgctagg gggagtaaat catcttgcat tatttgattt ttgttataga tatgaaaccg
      901 ctactccctc gattaaatgt ctctcagtct aacacctatg ggacctgggg aaagagaaaa
      961 gaaaagcagc aaccttgacc ctgtcaaata aatatctcta acttttcctg tcctccggct
     1021 tccaaaccaa acctgtctac tgatttttat tttttttttt tttttaacct
//
LOCUS       KCKM01000381             634 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6066apa ultra-conserved element locus
            uce-398, sequence.
ACCESSION   KCKM01000381
VERSION     KCKM01000381.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 634)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 634)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6066apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>634
                     /note="ultra-conserved element locus uce-398"
BASE COUNT          184 a          131 c          137 g          182 t
ORIGIN      
        1 acacggcaat gagcacgcta aattcagcct ctagtaggaa ccatcttctc aaactcactg
       61 ggcttgccag ggtgtaacca gcaaaatttg gcccatctga gtccggccag gctgctgctt
      121 tcatttattt tctatgagcc tttgtctgct gtttttcctt taataatgtg aaaatctcat
      181 cctctcattt ttcgatttca actcagtgga acacctgcct gccccgcaaa aagggtattt
      241 gaagagaagt ttgtacgcca cgctcaaaca cagcctggtg tgagttttta gcgtgtcagt
      301 cagtgagtta gagggaaagg gtaaggagaa gctaatcagg atgaaatgag attaaaggct
      361 gtctaatttt acagcaactg tgatccatca gccactgtga aagtgacagt ggaaatgaat
      421 gatggagaca gacaggtggg gctgtacatt tcactgattt atcctcaaat gcactgggcc
      481 ttattttatt gagtgaacat gaccgcattt atcatgactg tcatctaaac ccacttccct
      541 ccatttaaaa aggtcacttt actaggaggg agtaggatag aggcactttg aaaacagatt
      601 taaaatttaa taacacatgt ttataaaacc ctgt
//
LOCUS       KCKM01000382             996 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6081apa ultra-conserved element locus
            uce-2682, sequence.
ACCESSION   KCKM01000382
VERSION     KCKM01000382.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 996)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 996)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..996
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6081apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>996
                     /note="ultra-conserved element locus uce-2682"
BASE COUNT          296 a          195 c          206 g          299 t
ORIGIN      
        1 gtacactgaa ggtttttgga aattcagggt gtaaaatgaa ggaatgccca gcgagtccct
       61 tgtacttcta tgacagtgtt tgtctcttag ttacagcaag ggtaatgcta tcagcaccaa
      121 gcaacccaga tgaaaattat caattggtta ccaagaaacc taatgatttc atcaataata
      181 ttttaagagt tacaaaggtc atttggagaa gtaatgccac acggaatgtg cttgtgaagt
      241 gggtgatgtg tgggtggctg ttaagggtca acacttcatt tctcatttct ttaattgata
      301 cttctgaatg agtattaatt gagctgcaat gaaaagagtg tgcagtttga caatgcaagt
      361 gacaggatgg aagtgccatt tgcagagtgt atataaccac agctaacacc ctcaaagcgt
      421 taattccatt ttatgtcttt cacatttaat agcaaatttg ccatttaatc tttaagacag
      481 aagttactta ttctcaatct acctctcact tgcactgata taatctcatg ccactcagac
      541 tggcctgtgg catgaagcac atcacacttt caaatcaggt ccattttttc attagctcat
      601 atccttcctg agatgccctc ctttacagat ggctgatcag caatcaacac tagtttgttt
      661 caatcagaaa agcagccgta acttctcatt taaagactgt tcctggagaa gcgcattagt
      721 cgaaggcata aagctggcac tggggcaaca tgactctcgc aactgattcc ttttcaggat
      781 tttttttaaa gagatagacc tctttttatg cggagatctg ttttttattt taaaacgaag
      841 cataatgaaa tccatgcctt tgcatgttgc agggagccct tcgcgtactg cgggcaggtg
      901 ccagtagact gtaaatctga agagtgaata caaaaggtag caaaagccca ggaggaagcc
      961 agggaatagt tcccatatgt aagtgctgac actttc
//
LOCUS       KCKM01000383             343 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6097apa ultra-conserved element locus
            uce-551, sequence.
ACCESSION   KCKM01000383
VERSION     KCKM01000383.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 343)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 343)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6097apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>343
                     /note="ultra-conserved element locus uce-551"
BASE COUNT           81 a           86 c           87 g           89 t
ORIGIN      
        1 caccgcgcag cccgtccggc tgcggcaccg ctccccagcg cggcggggct cgccttgcct
       61 ccccgcttat acagaacagg atcatttaca taaagtcctt aaggcaaata actgttgggg
      121 ctctaattta tatctgatcg aaaattagcc gtcattatgc gctccattag cagcgtcttt
      181 aatgtgcttc taagcaccat ttgtcaagcg gcttgttaat atccttcaag tctttaaagt
      241 tgagagctca ttaaagagtg cgctctgtta ttgatgtaat ttagatgagt ttggaagagc
      301 gaacgcgccg cggacaacct ggatgagggg ggagaggctg ccc
//
LOCUS       KCKM01000384             493 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6127apa ultra-conserved element locus
            uce-2537, sequence.
ACCESSION   KCKM01000384
VERSION     KCKM01000384.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 493)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 493)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6127apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>493
                     /note="ultra-conserved element locus uce-2537"
BASE COUNT          180 a          108 c           88 g          117 t
ORIGIN      
        1 aaaaaataga acaggaacca aaacaacaaa acgaaaccag aatgaaatga aaacaaaaat
       61 cacagctgga ccctgtccta cacgaggtgt tagaaaacag gagccatgac aacacattca
      121 tttccactaa gggtgtgtga agcagatact gccccttctg cagctctcga taaacctagt
      181 cactgacaaa cacttgtgga aaaacatatg caccagtctc ctgcataata ccagctgcaa
      241 ctataacaac aaggttataa cataaaccta aaataagatg ataacatgta aatactgggt
      301 tatttagtct acagtacagt aatctggata aaaatgacaa gggatagcct aatttccttt
      361 ccccaaacaa ctttcacttt cctaggttgg aacgaccttc aatgcaaatc ttaacctcct
      421 gaggaataaa agaaggcttg ggaagagtca aaggcggctc ctcttctgat ttctctagtt
      481 ttcgtgtttc ggg
//
LOCUS       KCKM01000385             816 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6141apa ultra-conserved element locus
            uce-3966, sequence.
ACCESSION   KCKM01000385
VERSION     KCKM01000385.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 816)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 816)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..816
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6141apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>816
                     /note="ultra-conserved element locus uce-3966"
BASE COUNT          261 a          180 c          145 g          230 t
ORIGIN      
        1 tttcttctga aatcagcaaa tcagaacatg catgcctagg taaaatttga cccataggtt
       61 taagtctgct attgcaaaga gaagatcagt cctatcctac acagccatgt gtacatacat
      121 gtttaagaat aattatacag atatggaaaa tcatgtctac tttattgccc ttctaaatgc
      181 cctcccagga gcttttctca acactgtcaa acattaaaga cttctgtttg aaagtgtgga
      241 atttgctttg tatttccttg gaaaggaata catctttcac taccacaacc ttctgtaacc
      301 ctcctgccct cctcactccc acacccccac acaaagacac tccttaattg tattactgtt
      361 aggctgacct ccaaccccta ctaaaatgag gacaaggcta gttttgtgtt tcatgggata
      421 acaatttatg agcaattaaa aatgaagaga cacaaagcat tcatcacagt ctcagctaga
      481 caggcagctg aggtcaaagg ttctagcaat gaagtgtgca caatatattt ttatttctgt
      541 tttcactaag aaggaaacgg gttagctaaa aattatggca agcagcctcc agttcagaat
      601 aggtgcactt aatctttcaa gacagtccat gcttgggcag ataggttatg acagcacaca
      661 cacacacacg gggacacaca cttccagtat ctgtagaaga attcagaaca tattatcggt
      721 gaactcaaac acacagttgc ttaaaatgag gtggactgag tgccctgaat gcttatgcag
      781 tttacaactt agcagttata gttgtcctgc aaaata
//
LOCUS       KCKM01000386            1038 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6156apa ultra-conserved element locus
            uce-910, sequence.
ACCESSION   KCKM01000386
VERSION     KCKM01000386.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1038)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1038)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1038
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6156apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1038
                     /note="ultra-conserved element locus uce-910"
BASE COUNT          205 a          253 c          241 g          339 t
ORIGIN      
        1 aatatcacca ccagtgtgct tctcctgtgc ttggtgtgtt taagggcttt gcttcactgg
       61 ctgcaatagg ctgcttaggg tacgtggttc tgtctgcttt ttccgctcat gggctggcag
      121 actcgtctct ctcagctcac aggaggaagg gagctcagat atatggattt tagaaaaatg
      181 gctacgtatc aattggtaat acttggaaat ctttgtgagg tcgtttgata agcgggtggc
      241 tctctgcgca tcctttgaga cgaacgggaa cttttccctt tgctcgaggg agcactggat
      301 tgcagtgatt tttgtctgaa ggaagaaacc tttctgtacg tcctcctctg catgcctgct
      361 gcgctgcttt tcatttttaa caaactaaca cgttttctct gcttctgttt ccccttcctt
      421 atttacccgt gtgtttttta ttaacggatt ctctctcccc tgcctgcccc tgtctgttgg
      481 tttttagctc tacatggttc gcactatgac agagtcctta aactctgccg agctgttgaa
      541 gcagctcaag tctctgggac tggaaaagct attgcatgtg acacacaagt ttctgaggca
      601 gtcctacacc tatccgcctc ttttaaactt tggtggtaag acattactta ttacttttac
      661 ttgtcgtggt gatgtgaact attccactgc caacggtctg ctgcggagcg tgtcggtgga
      721 ggtcccctcg gcacgggcag gaggctgtgt cggtgcgcag gctcgcgtct cctctgttcc
      781 tctcgcctca aaggctttta cccacacggt gccagttctc agttttgaag tggagcagtc
      841 gcttactgat agtaattctc agtgttgctc gactaatgta ccatgtgtat tttccttttt
      901 tcccctccct ttccaccaca attgtttcct ttaatgatac agctttacat ggtgagaact
      961 atgttagagt ccctcattgc tgacaaaagt ggttccaaga aaaccttgag aagtagcctt
     1021 gaggggccca ccatattg
//
LOCUS       KCKM01000387             624 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6172apa ultra-conserved element locus
            uce-472, sequence.
ACCESSION   KCKM01000387
VERSION     KCKM01000387.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 624)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 624)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6172apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>624
                     /note="ultra-conserved element locus uce-472"
BASE COUNT          185 a          112 c          122 g          205 t
ORIGIN      
        1 cttacagaat ccaggtttca agggtagtga ttagtacttt cttctttaga ttttgattaa
       61 gagagagact tgagcactac attgttgcat tttagagagc atggaacaac aaaagtgctg
      121 gcacattttt ccctattctg tgccttttca cttccccaag ctttctgatg tctttccagt
      181 tcggagctcc tgcttagata aaacagatga ctttctgggc ctgcttctgc taacagcagg
      241 caggagcaat ggtgactgat tggttgaaac atgaggatta atgggtattt atatttcatt
      301 aaattttatg ctcactggag aataatgtat cactcgcaga tattgaaaca tatgtcaacc
      361 ctatccactt acatataatt caatttgact taaatgcatt gatcaaattt tattaaagtc
      421 caatatatct tccaaaaagg cccgctaaca caatattgct gcttcacatt catcagataa
      481 aaggaggcaa ttgtgttgta attccattta taccattttt tgggaaaagg gagattattg
      541 tgaagcgaat actcattaca aggtgactgg ctctggctga aggacttgag actgagatta
      601 ttaagtgaat tctcaagtgg tgcc
//
LOCUS       KCKM01000388             839 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6188apa ultra-conserved element locus
            uce-6944, sequence.
ACCESSION   KCKM01000388
VERSION     KCKM01000388.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 839)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 839)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..839
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6188apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>839
                     /note="ultra-conserved element locus uce-6944"
BASE COUNT          231 a          146 c          179 g          283 t
ORIGIN      
        1 gtgggggggc acgaatatgt cagaggagct gttgcagtaa aatgtaagct catcatcttg
       61 gagggggtac agcgtggtgg gcgtattgtt ggctcggaag ggagagaaag atgtataatt
      121 taatggtata tacaatccac tgatcctatt actatcctcc ctggagctct tgttagtttc
      181 aatgggagtg agtggaattg acatggactt gcattcctgg tcatgtgctt ttttttcccc
      241 ctttctttct tctcttgtga tctgagatcc cctttttgtt gatgttgctt tcccacttaa
      301 ttatatgcat gtaggttaaa tgaatacctg acgaaagggc ccacgtttca aggcagtgac
      361 atttgatagc tgagaggaaa agtggcttta atgaaaagca acctttggaa ttcctgcttg
      421 tgaaaaatcc aattcagctt tttgtgctgc cagcaagaaa tgatcagtag caccagtgtt
      481 tatggtatgt ccgttttggg atctacttcc tttgcatcta aatagcaaag acaaatttaa
      541 atagcatgat aacgcaccga ggactctgca tgcaaatatt ttgtaataaa tacctgatgt
      601 ttaatagtat attttcattt gtgtatatat ttttttctct tgctatcatt tgtttatcat
      661 ttctgcttca attatagcat tagttttgct cactgtattg atctcagttg taaaacctaa
      721 agttgcatgt tactagcagt gcactatata caccactgaa ctccaatggt atgtaaatta
      781 gtaaaactcg gtaactggag aaggcgaaaa tgcgtagcaa tgagtatata caccgatac
//
LOCUS       KCKM01000389             813 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6203apa ultra-conserved element locus
            uce-5344, sequence.
ACCESSION   KCKM01000389
VERSION     KCKM01000389.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 813)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 813)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..813
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6203apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>813
                     /note="ultra-conserved element locus uce-5344"
BASE COUNT          293 a          127 c          153 g          240 t
ORIGIN      
        1 tttcttaact gcagcatgaa agtatgcttt ttgtaataaa gggagactga tggaggtaaa
       61 ccaacgatta ggcaatttca acaacaatca cttagctgta tagtgtagtt taaaacacaa
      121 cacagagaaa cagggaaata atgaacaatc tgtgcagagg tgattctagg agacagaaga
      181 acaagatgtt aaaaataaac aaaataaggc gttgacgaga gctatactta atacaaaacg
      241 tatcttttcc ctttgaaggg caatattgca catctagaat gccttttacc gtctgagaaa
      301 agaaagacga gttagtggcc aagaacaccc tgatgttctg tgctacaaat tgaaagtgaa
      361 ggttactttc ttgtagactt tatcttaaag cagtaaaacg ggtagctgca gctacaactg
      421 aaagtattga ttttgtaatt tcagcaaatt aagaacaaga caggaaacct attaaacctt
      481 tccactgatt gccagggcac tttttggtga tgctggtgct gacattaaaa ttacatgcgc
      541 ctgtctcttt aaagacaaac atatacattt tacagcagat agtaccagtt aacgtgctgg
      601 aaaaggatct ttataaatct gtgtaatttc acatttcaga tgtggaactt ttgaagcctg
      661 atgacatgaa tgtcaagcag cacatctaaa attttcataa attatggttc atgttagatg
      721 tgcttttatt acattttaat aaattaaaat tttcacaaag ccagaagatt ttttataata
      781 atagcaaaga tggtaacgct agtaatagca tta
//
LOCUS       KCKM01000390             505 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6219apa ultra-conserved element locus
            uce-2719, sequence.
ACCESSION   KCKM01000390
VERSION     KCKM01000390.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 505)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 505)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6219apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>505
                     /note="ultra-conserved element locus uce-2719"
BASE COUNT          183 a           85 c           82 g          155 t
ORIGIN      
        1 tccttttaat atattttatt ttaaattgcc aaagaataat atattgacca cccttataaa
       61 tacacttaat aatagatcag atgatttgct gcaaacccat tgctggaggt gagctaggga
      121 gaagcgactg acaaggcagc cttttctttt tctaagcagt gtcttgatga acaaaccagt
      181 gctgtatttt aaacaaggct tttgcactga gctaccccag cacagtaatt taatgaatct
      241 acatttcatg actgaagtga taaggatgaa acattttaaa ataaccaaaa ggtagataca
      301 ccaaaaagtc tgatgaaaca ttaaatgaat gtagtgtaac acattatctt tgcttctgca
      361 catccaaaaa gtgcaatgaa ctaaaacatt gcattaagcc aagaataaag ctaaaaatta
      421 aattggctta gaaagatcta gtgtagtggt ttatgcacta agaacgcagt aaatttggtc
      481 atttaatatc attctcttta cctct
//
LOCUS       KCKM01000391            1089 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6234apa ultra-conserved element locus
            uce-1010, sequence.
ACCESSION   KCKM01000391
VERSION     KCKM01000391.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1089)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1089)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6234apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1089
                     /note="ultra-conserved element locus uce-1010"
BASE COUNT          338 a          187 c          230 g          334 t
ORIGIN      
        1 ggagaggctc ataacctcta tttctgaaaa ggtcttttaa aaatcctaaa tgaagtgact
       61 gggcatgtct gagggaggaa ggagagcaag gcccatggag atgaaaccaa tctgttgatg
      121 cagagtcctg ccacggggct tttctcctga aaggcattta cacagacatg gtggtttgta
      181 agaaccaaga gcaaaatcag gctaaagacc ataaaggaca gtagctgagg gaggcagata
      241 atactgtatt gaggtaaaaa ctgactggct acatctgaaa tcaggctcag catcaggctt
      301 tgatctgccc acctccttgt atatacatgt aatcttggat cttgattgaa tattcccact
      361 ctgattttgt aattaaaaca tcatttatac tgagaataat taagacaact gtacatttga
      421 ttttaaaatc agttttgagt attgtgcctt gtcaagctac aagaatggtt cctgcagctt
      481 tacaagttag cattaagaag cagacagtga ccgcaggcac ctgagtggaa ggtttgacag
      541 tttgataaat taggaatgac acttgccaaa atggctgtcc ttccctcagc ctgccagtgg
      601 agcatttaca cactgttaat tgaattggca atttgtgtaa cagtacctgc ccctgagctt
      661 ttgtaacgct ggagctgcca tttagctctg ataatccagg acttgggaat agggacgaaa
      721 agcttcacat gatattattg cagatttaaa atgacagttg gggaccttgt tgccaatttc
      781 ccattaaatg agaaataatt aacaatagca ataacaaagt cttataaagc tggaaagtta
      841 aattgacttt tcagcagtag tgtggtttga aattgcttct agtgtgatta tcagattgcc
      901 ctttcagtat tatataccct aaatagtatc atctgatggt ccaaataggc aatgttttca
      961 aagctaccct gttttattag tgtgagatgc ttctgattta tctgtgtggt tttttttttc
     1021 cagccatgta aaaattgagt tatgttataa tatttcatac agataaagac ttaatgaaat
     1081 attagagat
//
LOCUS       KCKM01000392             266 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6249apa ultra-conserved element locus
            uce-299, sequence.
ACCESSION   KCKM01000392
VERSION     KCKM01000392.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 266)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 266)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6249apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>266
                     /note="ultra-conserved element locus uce-299"
BASE COUNT           89 a           36 c           39 g          102 t
ORIGIN      
        1 gtggagagtt taattaaaca ttgcagctgt ttatctctat ggtgattaaa ttttcatatg
       61 taaattacat gtattaagat caagatactt atgtaaatgt cacttgcctt aatgttttgt
      121 gttactgtta ttaacatcta accatcagct tgtaatcttc ttgtattgca ttacgctggc
      181 atgcactaca tgactaaaat aagtagattt atatcttaat aacaaacaag tttttaaaaa
      241 gaacatctta ctatgtaatt gagatg
//
LOCUS       KCKM01000393            1154 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6263apa ultra-conserved element locus
            uce-4981, sequence.
ACCESSION   KCKM01000393
VERSION     KCKM01000393.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1154)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1154)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1154
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6263apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1154
                     /note="ultra-conserved element locus uce-4981"
BASE COUNT          384 a          219 c          220 g          331 t
ORIGIN      
        1 ttactacatt tagattcttt aaaaccattg agggttttct ttaataatct gaaaagtacc
       61 tatgtattaa aattttctct ttcttctcta tccctgcctt ccaatgtctc cagacataca
      121 ctgacttgct gaagtctaca aattctttac agtaatattt caggttttaa tagcaattaa
      181 catattaaat atcagtgtac aaggggactg tacaaagcaa ttccatagta aattagtctg
      241 aaaattgccc taattgttat gccagaagat gtcctctaca ttttgtcttg ggagaaaaag
      301 atctttctgt ctaaatgcca ttatgtgtca tcctagctga gcctcctgcc tagctgggac
      361 attgaagttg tacagcagga gccgcttctc aggctttaag aactacagta aatcttcaaa
      421 caatttatcc aaacaaaggc cagtgtgtgg agagaaaaat acacgggaag cagatgaata
      481 agcaacatca attatggggg gtttgacctt tctgccccac accatggcac agatttcaca
      541 ccaaatcgca gcagattgaa gttgacatgc ctggagtgaa aatactggtc ctcacaatgt
      601 tgccactcta cattcacaga gctgtagtaa gcagaggaga gagaaaatga agagaagggg
      661 aggggagtgt gaatgaaaaa tcacgcataa tgggcctggg tttattttac agagaacaaa
      721 atggctcaat ttgagcactt agactgtcga aattggctag tgtgagatac cagaggttca
      781 tccaagggga cacttgaatc aggtgccttc agtgatatga cctaagagaa aggatgggga
      841 gaataaaggc agttcttaaa aacttgttaa tgttgttaaa gatcatgcct tttcacacct
      901 ttttttatag ctacatatac agtcattgaa ttttttgtac ataatcacag cagctaagaa
      961 ttaccattag tcaaaattaa aatgaccagg ttaaaagcaa taaacactgt ctcatgcagc
     1021 attatcttgc cacaccaaaa atccaaacct gcctagggtt atgatatcta tattttgaaa
     1081 gattcatgcc acaccccaga aaaaattgcc tctacatcta tggaaaagac agattaacta
     1141 atgtgtactt cgaa
//
LOCUS       KCKM01000394            1020 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6279apa ultra-conserved element locus
            uce-5363, sequence.
ACCESSION   KCKM01000394
VERSION     KCKM01000394.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1020)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1020)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1020
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6279apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1020
                     /note="ultra-conserved element locus uce-5363"
BASE COUNT          277 a          184 c          268 g          291 t
ORIGIN      
        1 tgccaattag gatctttagt gtcttcatct gatgagcatc ggggtttcag gaggaagttg
       61 accgagtgag ttggcaaact ttatgtctac acctcaggat tgtgtgcact tattttttat
      121 ttcagttctt tgcattgcat ttattttacg tgtttgtaag agtaaggggc aggccatgct
      181 atcctctgtc ctgctaaaac aaagcttgag ttaaatgaac aagcaggatg gaaatgtcag
      241 ccacaccttg tcctcgctag agagttggag gttcaaacct gacttggaaa gcgcggcgaa
      301 ggctgcatca gcaacattac atagcgggga cgatgcaaaa tgaatggtag tatcccgagt
      361 ttggtgcgga ggctgagagg tgtgagaaat ggcacagctc cggtaaaggt gaaacaatcg
      421 agggaatcca cgtgataaaa ttcaatgtgg tttgttcttt gtcgttacag tactttactg
      481 gccttgagtg tggacacaag ttctgtatgc agtgctggag tgaatattta actaccaaaa
      541 taatggagga aggcatggga caggtaaaat gtcaactctg acttgttgct ggaaatcctg
      601 tatattggag tgaagggaaa aaaaggagag aaatcctatc catgaaagtt taaaaaaacc
      661 aaaccaaaac aaaataaacc cgagccctag agctttgggg gctatggtct ttgccatggg
      721 tgaagctgga gggaactctg gagttagtgc gggtgtcata gttcggggtg ggaggaatca
      781 tgctgcgcgc ggtggcacat ctgggacgtg atgacagagc caaagtgctc tttttttgct
      841 acggctcata gtgaagtctg ttgccttgga attctttgta atgcaaatac aggataaatg
      901 ctgttcttct tatgattttt tttcccccca gaccatttca tgccctgctc atggctgtga
      961 tatcttagtc gatgacaata cagtaatgta agtatgataa gttgccacct cttggctttc
//
LOCUS       KCKM01000395             693 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6294apa ultra-conserved element locus
            uce-7666, sequence.
ACCESSION   KCKM01000395
VERSION     KCKM01000395.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 693)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 693)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6294apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>693
                     /note="ultra-conserved element locus uce-7666"
BASE COUNT          232 a          115 c          118 g          228 t
ORIGIN      
        1 aaaacttttt ttcttttcac ccttataaat gtaccctttc caaattcttc atcttcttgc
       61 ttttgaaata atgaaaagac taaaaagact atgcttgtaa ttaaaagtca tttttaaata
      121 acctcagaag attgtttcta gaaatcaaaa catctttatg gtcctatttc taaagaaaga
      181 aagacaagtg actgggatcc tgtacacttt actgtagtct acattaatta ccttctatta
      241 aaaaatgaca aagacctttt tgaaagggaa tctggcactc tttccacaga aatgatggca
      301 gacaccctac tctctgctga tttcttgaca cttctaatta cctgtattca tttgaaatcg
      361 tttcctttgt agtgagttat tggcatgatt ttcagagaac aagaggaaaa tggaaaacat
      421 tttagcaagt taagaaaaaa aaatcaacag tatcattgtt tgcagctttt gttgaaacta
      481 cctacgtgag tcatttgagg gacatgaagg taaatgaaag gttatacttt gccctgcacg
      541 ttgtcgctgg tatttgtaat gtcaataact gtagaaggtt gtcaggaaac tggagagata
      601 aaggtcaata gcaatgacaa atatatcatt gtatgtgttt gaatatgcaa tatcaaccta
      661 atctcacggt ggaggttttc acaccctgga aat
//
LOCUS       KCKM01000396             710 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6309apa ultra-conserved element locus
            uce-6725, sequence.
ACCESSION   KCKM01000396
VERSION     KCKM01000396.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 710)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 710)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..710
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6309apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>710
                     /note="ultra-conserved element locus uce-6725"
BASE COUNT          258 a          141 c          119 g          192 t
ORIGIN      
        1 cttaaatact gaacgtatgt aactagacat ctcaatttaa caaccagaca tacattaaac
       61 agcattaata gctaggcact taatggatca attcccactg tttgtgtaat gtggaaataa
      121 aaaaggctta ttaaatgaca agctttccct ggtttgtgct aattaattat acactgcatc
      181 tgactgctaa tttagtggaa aaatgcagcc caaaactatg gtttctgctt gaactttgcc
      241 tcagcaccac ctaattcagc gcagagtgca gctgcgacct gcctctgaac gacgacagta
      301 ttaaattaga gcacaaggcc atcaatttaa taagtactgt agcaggtaat ttgaataagg
      361 acagtattag tattctacca gtgcacaact aaaagcagct gacctttcag accagagaag
      421 atccttgaac acatctagct gaatcggaga acacggtaat aatctgacca tgttaagagt
      481 gccaagagag acttttacag ctctacaccc attactatac atcagctact ctacagtata
      541 taagaacact ttatgtacag aaaaacaagg ttataaatag aacaaaggca atgtggaaga
      601 tagatttgca ctggcacatt tgaaaattct ccttattacc ttgatttatg gtataaagaa
      661 tgtaaaatta atcaatgcac ataaaaatgc actatgaaca cccacataac
//
LOCUS       KCKM01000397             791 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6325apa ultra-conserved element locus
            uce-6888, sequence.
ACCESSION   KCKM01000397
VERSION     KCKM01000397.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 791)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 791)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..791
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6325apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>791
                     /note="ultra-conserved element locus uce-6888"
BASE COUNT          252 a          153 c          137 g          249 t
ORIGIN      
        1 ttccacttgt ctgtgctgaa tttcatctgc cattgtgttg cccaattgcc tacagtagtt
       61 tagttaggtc catctggagt tcctaccaat cctcctgggc ctgaagtaac ctaaataatt
      121 ttgtgtctgt gtcataataa ccataaaata attctgtgtc aaaacaattt tgtaaattgg
      181 tgtttcaaca tttgtcctga gtgcagctga acaaaaccct ttgtgtatag ctccagtctt
      241 tgcgcctcaa ggactcccct attatacacc tgttcttgac agattgaggc ctaaaacagg
      301 atagcttagt cacgtattaa ccagcaggaa gaaagactct cctttttatt aatgcctgcc
      361 tactagttca gtgtttggaa ttcagtccta cctataaatc aacatcagag actacaaccc
      421 agtgtgttca agagctttgt ttaaacatca aaagaagaac agagacaagc actatgatag
      481 aaatatagct aatcactggc aaatacatct ttcctgtcag taggagctta acctttttgt
      541 ttaatgttac tggaagaaaa tgcacttatt tccatcctat ctatttcctt taaagaaata
      601 tacaggtttg ctgggaaaaa cgatcctatt tattactaat atgacatgaa actagaaaaa
      661 tggattttag aagtatccag gtgaaggaag atttatggaa tcctgcaaat ttcaaggcta
      721 cacaatgatt aataagaaca ggaactactc acatggttaa acatgtttgg ctaatgcatt
      781 gcttgataaa a
//
LOCUS       KCKM01000398             910 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6341apa ultra-conserved element locus
            uce-4695, sequence.
ACCESSION   KCKM01000398
VERSION     KCKM01000398.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 910)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 910)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..910
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6341apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>910
                     /note="ultra-conserved element locus uce-4695"
BASE COUNT          280 a          177 c          175 g          278 t
ORIGIN      
        1 ttatgcttct gtatgtgtaa gcatgttatt tcttgtagag taaaatgtcg tctcataaaa
       61 gcattagctt caactggaga cactattaca gattttgtgt tattagcatc caagaggggt
      121 gaggaaaagg tgctggagca gtaggggact gttgccataa acaggatttc acagagtcat
      181 aggtctttca gagatatctc tagcttacat tacttctaaa gttagcatta tttctccatt
      241 ccaaataatc agaaataaaa catcagatac taaacactcc cctagtgact aactctattt
      301 tttgggtcct tacttgcccc tgctgtccac tcctgcccat cctttgcaga aagaaaagac
      361 acttaaaatt ccttctgtga gttgccaagg tgctcccagc ccattgtgca gagtcattgt
      421 caggttaaat tagggagtac agactccacg agtgtaaaaa aatcaatact tgatggaaga
      481 ttgctccccg gaaaatctgt tttgattcca ggactacttc gtgaccaaag gcttctgcaa
      541 aatgacatgc cattagtcag aaaataaaca cattctgccc ttgaaattgg atggaaatat
      601 gtcaggtgat tgacctattc attctcttca ctctctgggc agagaggata ggtgtggtag
      661 ctgtggatta ggcccgtgaa ccaggtccat tttcgaagca gtaaaaaaaa tgtccaatgt
      721 gaattgcaag tattctctag accattgttg taaagctatt gcaaatgcat tccatcaagg
      781 taaatgcatt tgtctggaag gcctaactct cctgtgtttt ctaaatctca gaataaacca
      841 tactaaaaat cttaaaataa aatggttctt tcttctgcaa aaaacttgca atattaatga
      901 tgatgtaatt
//
LOCUS       KCKM01000399             567 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6356apa ultra-conserved element locus
            uce-5429, sequence.
ACCESSION   KCKM01000399
VERSION     KCKM01000399.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 567)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 567)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6356apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>567
                     /note="ultra-conserved element locus uce-5429"
BASE COUNT          191 a          113 c           93 g          170 t
ORIGIN      
        1 agaaaaaaat tgagaaaaag gaaaaaaagg aaaaaggggg gaaaaaaagg ggaaaaatga
       61 gaaaaggaaa aataaaattg tgcattttct aaataaagca caccgtttcc tttcagtcca
      121 tggagaaagg gtgcctactc aatcctctta ccgttgacaa tataataaaa ccagaggaac
      181 ttttttgaag tagatctgca cattccacat ttggattgag gggcaatgga ctgtttaaat
      241 tgctatttac atttccagct gttttaccag tgatttgccc aacttaatag ctctttaagc
      301 ttttaaacaa gaaaatagct attctcacga ctcaaagaag aaaccatggt tatttcagac
      361 tgcctctatt gtaaaaggct tagacccctc cgtctttata gatgcccttc cctttatagt
      421 acttcccttt tccatctcct cctactttct aaatcttctt ccatttttta gttcactttt
      481 tacattatat acttttagca acataatgca tctctgctga ttcaaggaag atgtttacag
      541 gcagccacca gagctcccaa aagagac
//
LOCUS       KCKM01000400             369 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6372apa ultra-conserved element locus
            uce-1977, sequence.
ACCESSION   KCKM01000400
VERSION     KCKM01000400.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 369)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 369)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6372apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>369
                     /note="ultra-conserved element locus uce-1977"
BASE COUNT          114 a           73 c           61 g          121 t
ORIGIN      
        1 atcttaaata ccctacacca gaaagtaagt tagcctataa gcctgatagg ggtcagggta
       61 ataacacaga atgaacaaat tacactgtca ttccacttaa attatttaag ttatttaatt
      121 tgacctgtag atagtctctt gtcttctcat catgcctgac ttttaagtgg gaggtcttca
      181 ttcatgatga tcctttaatg gaagcaaagc tttctccatt taacccatgg tgttatcaat
      241 catgtacagg gataaatgag gctgtaagat tttgccagta tcacaaatga cactgtgacc
      301 tgaggccaac atctttattt gcttctccag tgattcactt cagcagatat taaccaattt
      361 tataatcca
//
LOCUS       KCKM01000401             934 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6388apa ultra-conserved element locus
            uce-5146, sequence.
ACCESSION   KCKM01000401
VERSION     KCKM01000401.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 934)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 934)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..934
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6388apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>934
                     /note="ultra-conserved element locus uce-5146"
BASE COUNT          267 a          174 c          193 g          300 t
ORIGIN      
        1 tgccatgtac atcgcataat gcttgctttt ttgcatattc taaatttgga agatttaagc
       61 tatacaggag agtaagacag tttacatttt agttttgtct tccgtacttc tgctgtaatt
      121 aatgcttgtg cataggtcat ataagggaat caaattggca tattagtctt taggtgcttc
      181 ctggggaaaa gtgtctactg aattgaatag cctggctagg gaatgagcag aagctgtagg
      241 atagggtcct taaaaaatat tagaagagag tttgcaaggg acggagacgt gggatgttag
      301 cctgatactg tggtccttga tgtgccagcc atttaaactt cctgaaatta tctagagcat
      361 tcagatccgt aaaatgaatg tgtttttttt aaagaaagtg acagtgctct tctgtttccc
      421 tattgaaatg ctccctggcc tagttcaaca gaaacatttt tacattacaa ctgtgaaatc
      481 ttggcataaa gctccccttt gtgcccttca ttattttctc acaaatatag tccattgtca
      541 catagctgaa gttaatttga tcaacattgg gacatttaac ttttatgtcc ggtcaaagga
      601 gctgtttcat gctcattttg ggtattcaaa agaaatgatt gccagaaaaa taatgttact
      661 attaacaatt cagagcaatt agtttcccag ggagaggcga tgtgatgcac cggctccaca
      721 caactattct ttgtcatttt atggatgctc atcagtcaac tgtcacatct tctcaaagac
      781 ccctccaatc taaatgtttc tctttgggct tttcccagaa ctagcagctg aatgagcaaa
      841 agaaaagcca cttagtttct aggcaaagga aaacttctct ctaaagatct gggtcatttg
      901 agatcctcgg catagctcac ttctggggag gggg
//
LOCUS       KCKM01000402             778 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6402apa ultra-conserved element locus
            uce-799, sequence.
ACCESSION   KCKM01000402
VERSION     KCKM01000402.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 778)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 778)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..778
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6402apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>778
                     /note="ultra-conserved element locus uce-799"
BASE COUNT          169 a          234 c          173 g          202 t
ORIGIN      
        1 agcactacct gtgccaacag gctgcatcag cctctgggtg ttgctctccc ctcccactct
       61 ttcttccttc ttcactactc actgcccctt cccgaggctg tgctttcccc ctgcctcctc
      121 cggatccctc ctcctcttcc tccccccccc tcgctcgtgc aaccaaatct taggttcttc
      181 ctgcttgtaa tttgtcgcta atcagctgtc agtgttggag caatgatgag aggttcatct
      241 cttgctgagg gtaatggcct taaaagtcac agagtcaatg tcaatgggat cgctccaatt
      301 caatcagaga cctgaatgag aaatggcccc cgctgacatt agcactcatt ttgagcccaa
      361 gcatctgggc cctagtaaat aaccatcagt gggtgggtcc gggggacagg tcattagccc
      421 cacgaaaaat aaatatcgtt tcccttgatg gctgcgagta atttagctca gacgaggaaa
      481 tttcacccta gattaagtat gatgagccaa tatcagtcag aggaggccaa acagtgagag
      541 cttgatgaga tggagggaaa tttatatgca gctggctgaa tgcaagatga gtttaaagaa
      601 atgatcttct cttccactct tgagccatgt gcagtgctgg gcactgtgtt tcctgcaaca
      661 ccccctctcc ccacgctttg gagggctccc ccggcctgcg gacacccgtt tgtgcactgc
      721 agggcccaga tactgccgtc cctcctccct ccaccagcac cagcctctgc tttctgac
//
LOCUS       KCKM01000403             776 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6418apa ultra-conserved element locus
            uce-7987, sequence.
ACCESSION   KCKM01000403
VERSION     KCKM01000403.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 776)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 776)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..776
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6418apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>776
                     /note="ultra-conserved element locus uce-7987"
BASE COUNT          281 a          123 c          131 g          241 t
ORIGIN      
        1 ataagaaata ataagccaaa gtagaaaaaa tatttctgtt ttaaaaagca aacttatttc
       61 aaactgcatc ttccatttcg ttctccagta taaaggaaat tcaattaaac ttcattttcg
      121 aggaagaata taatgtcgtg tctcagaaaa agatttcttt tctcaagagt tctttacaaa
      181 acacaaaatt ctaatgagat atttacctgt attagtcaag atatacccac ataccccaca
      241 gtgtatgtgc ttgttaaaac cttccagtca ttctaggctt agggaaatag tgtccaaatg
      301 taccatattt agcttctatc tcaaattctc ccgagctgtc aatttaggtg ttaaagagac
      361 catttgtaaa gcttggctgg gaattgccat tattgactgg aatgtgtgtt tatcattaca
      421 ttcaatgatg aaagtggaac atgtagcata tgaataaatg tcagcagatg tttcttttaa
      481 atggcctgat ttcaacctcc tgttgtttgt cttgaataca aatattaaaa aagagaaaaa
      541 ggcagaattt tttatgacat aagtgcaagg gtagttatat taaaaaacaa caaaaataat
      601 gatgaaagtc acagaagaac aaggaaagta taattaataa gactcatgtt gacgctctca
      661 tgctactatc tggtttgata ttataaaagc tacaagaaca gcagttcggt gtgggatata
      721 tcaccccata ggaaggaaga ctcacagagt ctgttctcat aagcatatta catgaa
//
LOCUS       KCKM01000404             857 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6434apa ultra-conserved element locus
            uce-7520, sequence.
ACCESSION   KCKM01000404
VERSION     KCKM01000404.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 857)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 857)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..857
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6434apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>857
                     /note="ultra-conserved element locus uce-7520"
BASE COUNT          302 a          162 c          188 g          205 t
ORIGIN      
        1 tatttccacc caatgtcatg ggagacagga aggaaaaaaa aaaatcactt ttttaatgca
       61 gcttttaaaa tagaaaagca aaaaaaaaat tttacagcac ttaataggcc tcccttgcaa
      121 tttaaaaact gattttcagg agctcatata ttcaaatctc caaagtctat ttgaaggcac
      181 atctgaaggt gcaccctgca acctgtgtgt agcaaactct tttgaatctt gtccttgaaa
      241 caaaaattag tgccccatgg gagctcagca gtgtagacaa ccactaactg cagaatgact
      301 gaaagcagag ctgagagtcc ttgcagctgg gagggagaag gggatgagag agcgagggaa
      361 gatgagaaaa gccttcagga gccatttggg agacagtcac tgggaagaag aaagaaagac
      421 atgcactaaa aacaacagaa acacaggtgg aaatggccta ctgggaaatc aggctgtcaa
      481 caaacaaaag ccgaaggcca gaaagcagtt tcagtagcag cccctgctaa cagggcttca
      541 gtgttcagta aataaattag cagcagcttt gactgtttgg aaattagtag cgacatgatg
      601 aaagaagcaa atgacttgct tttatctgga gtggaagcac taaacttcta aagaaatcct
      661 tgcctatgtt aggagaagca gagatgctta tatcagctta gacttgaaca acaataatac
      721 cagaaaagtt tcatttcatt tagcagaggc tcagaacttt gttcgtaact aatgagacct
      781 gtgtccctct gggctgcctc tgacagcatc tctcccttga atagtttatc acttaagagg
      841 taaaaataac atagatt
//
LOCUS       KCKM01000405             681 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6450apa ultra-conserved element locus
            uce-400, sequence.
ACCESSION   KCKM01000405
VERSION     KCKM01000405.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 681)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 681)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6450apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>681
                     /note="ultra-conserved element locus uce-400"
BASE COUNT          219 a          144 c          123 g          195 t
ORIGIN      
        1 ctatatttat tgtcattgag cacactatgt acccaaagca aagctggcat ttgtcgggca
       61 tcaaaaaaaa aaataaataa agccacacaa cttgggaggg gcttctctga aaactggctg
      121 atgtaccttc agcaaatgaa agggcaaaag agatttcatg caatgctagt ttgaaagcat
      181 cggttcatta aggatattaa ttttctgata actacacatt taagcatgac acactggagc
      241 agtatctaca ggatttagca attattaatg cgtgacagtt tcaaatgcta agtgaatcaa
      301 ttaaacagca gcattcacaa tttgagaaga gataactgct tcataactgc ctaagactac
      361 aattttcaca tgacaaaaaa gggccattca ggctccttca aaacctgaca ggtcaagaaa
      421 gaagtttgaa acaaaagcac cttataacca tcatctctcc tctttacttg tcagatcaac
      481 tttgctactg tctccgctga aatggcatca ccatgccagc tgccacaagg tgatttttca
      541 tgtcttgtca aagaaatctt ttattctatt tgctctgcat taacatgtta catttattga
      601 tcaagccctt tctgcagcca cagcagggca ctgtgctctt atgcctaagg gggctttgat
      661 gtcctggtga cattctagac c
//
LOCUS       KCKM01000406            1204 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6465apa ultra-conserved element locus
            uce-330, sequence.
ACCESSION   KCKM01000406
VERSION     KCKM01000406.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1204)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1204)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1204
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6465apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1204
                     /note="ultra-conserved element locus uce-330"
BASE COUNT          369 a          232 c          222 g          381 t
ORIGIN      
        1 aatggttatt ctgaaagtta tttttctgtt ttttctttgt ctgaaagagg aaagggggag
       61 agggggatga ctgctccata attataaatc ttctgaaatt gtaagtcggg aaaagacttt
      121 tcaaataaaa cgtttcccag aaaagaatat ttggcagccg ttggctcttg ttttccctaa
      181 taaccattaa aagtctgccc tagtaaacca ttttactgca acgtttgaaa tggtagagtt
      241 tacattttat ttaattaata gttgcagagc attaaagcaa catctcatcg gcaaaacagc
      301 tccttatcct cgctttgtct caattggttt ttttacattt cattttcaat gacatgtcag
      361 ccgtctctca ccaacctcaa aggaaagttg aatgcggggc ttacaaagtt aagctgacat
      421 ttgctctctt ccaataaaaa atatttagtc cattaaacat aaatacctgt cattatgata
      481 catggactgg gtacaagcct cccgtttccc tctgatgttt attacatcca aacaactgca
      541 gtgcctgcat gttttcaact ttagtgtatt gattaaactt ttaaatggct gccatataac
      601 ccagggacat caggaagatt aatttgcgtc aatgttcatc tgtaattcat tagccattta
      661 ttctttacaa ccacatgggc tatcaagaaa atgcaggcca tttttcactc tgcacaggct
      721 tgggaacaga tcctgaaatt tgtgctgcat acaaataagc tccccaggcc cggccactta
      781 aactgcttgg cttttcaaaa gttaaagttg ggaataacag cacaaaatag ggaacataaa
      841 cagaaacgga caaaatatac gtcctcaggg tactagggat ttaactgagt ttgtccactg
      901 tcttttcatc catggattat ggtttcttat ttcagtcaga ttaaaataac tgaaacttgt
      961 ttctgtgcaa aggccataaa taaaatgagc tgcacccccc tctaatatct tctaagatgc
     1021 agttacttgg agaaagctag aaagtggcag tgaagtataa aaagctcatg cctcaaggag
     1081 gttgtagatg tgaatctaag aaaaggatgc cgttttaacc aactctcaca tttattgtgg
     1141 attccagtcc tgcctttatt tggtaaaatg cccagctaaa tattggtatg tttccttagg
     1201 gtag
//
LOCUS       KCKM01000407             494 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6481apa ultra-conserved element locus
            uce-7636, sequence.
ACCESSION   KCKM01000407
VERSION     KCKM01000407.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 494)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 494)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..494
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6481apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>494
                     /note="ultra-conserved element locus uce-7636"
BASE COUNT          139 a          104 c           96 g          155 t
ORIGIN      
        1 atcgtgttca tggtgaatgg ggtgtatgaa aagtgtaagg ccataagcac tacaatatga
       61 acaaattttt agactgagca ttcctctgct tggcataatg caggtttcct ttgtactgtt
      121 ttctaccttt tgactagatg agggccagag ggcaattttc tccatgctca tgtaatctcg
      181 taccccctgt gactaaataa tggtcattat accaactata ttcaattgta tagggctcta
      241 tggctttatg cttaggatta ctattccccc tagacaatag tgagaatacc aggttaatac
      301 agctgtgacc tcactgtgct caatttaaac tcgggcctca caaggtgaga ggcttgtgca
      361 tttacccact gaactaatca gttaaaaaac tgatgtgata tctaccacat gttgctccct
      421 ttttcataag agaattgctc tgtacccccg taagagtttc taaagcttgg taacaatgcc
      481 gagcatctat caaa
//
LOCUS       KCKM01000408            1073 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6495apa ultra-conserved element locus
            uce-1745, sequence.
ACCESSION   KCKM01000408
VERSION     KCKM01000408.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1073)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1073)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1073
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6495apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1073
                     /note="ultra-conserved element locus uce-1745"
BASE COUNT          359 a          201 c          229 g          284 t
ORIGIN      
        1 agataatatg atccatttgc cagatttctc cttttagttg taacacgaag ccattctggg
       61 ctgaatgacc cagagatgat aatgaagcgg atgatgatgc cattgcctgt gataatggtg
      121 tgacagggag aataccctgg aaaactgcat gagctgataa gtgtaaaggt ataaacaaac
      181 caaaacaata cggacttata gacattagtg cagaacaaaa gagaggggaa aatcaaagcc
      241 aactgatcaa catttaaaaa aaaagacttt gcaagggtga ctttttcagc agttttcggt
      301 agtgcactgt gtttcatcca cacgtccttc ccaaaaccga gcccttcgca gctgaaacaa
      361 cagaaggcga acagtctcat cctggagagg gggggagctg cctctccctg cccgggaaca
      421 gtttgtagca aacagtccgc gatatgaaaa tgtatttaat gcaattaata atttaagaag
      481 tgagagcatg tgctcttgga gagttaaatg cttgtcagag tgatagatgc acgcttcacc
      541 accaatacat ttcgtatgaa gagcagaggg attttgcaaa cttgtgttga ccttgggttg
      601 cggtatatag gaggcagatt gcaaaggcag gcctgcttat ggtaggagag tgcatcagct
      661 ctcaatttac agccctttcc ccaattaaag gactgtaaaa acattaaaat taatgcagtc
      721 ttaactccag agcaggctct actttcttaa ttagtgcata attattcagt ttttgatatc
      781 ctggaaaatt atcacatgga aattatttta ggcacagtaa caatagcccc ccccaactcg
      841 attaacatgt ggaagtaatt aacactttat tacagtgaaa atactattac tgctaatgtt
      901 taatgacttt tgccattgca tcacaagcag gaaatttaga acactacaga gcaacggtct
      961 gctataaata tagtataaag attataaacc agagtcagat gattcgcact aacagcgttt
     1021 aagacaggga tatgacatgc aatacgtttc caaaatgtca tatgagggga aaa
//
LOCUS       KCKM01000409             639 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6509apa ultra-conserved element locus
            uce-3817, sequence.
ACCESSION   KCKM01000409
VERSION     KCKM01000409.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 639)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 639)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..639
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6509apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>639
                     /note="ultra-conserved element locus uce-3817"
BASE COUNT          185 a          115 c          124 g          215 t
ORIGIN      
        1 taataccagg tgggagaaaa atatgttaag aaattactca tgtaaatcgg tgaccactcc
       61 ataattctgt ccacttccat tagcttttaa ttgtgctctg ctgcttgtgt attaaaatct
      121 ttcacattat gcatctttta ttgaggatag cgtttattta tatgactaac tgcaaggatg
      181 gatgggtaaa atgaaaaaga aaggtgggat cgtgttttcc tcttctgtct ccctctcttt
      241 ctctctctcc ctctccccct cttttctaaa caagctaaga gtttttataa ttcatcacct
      301 ggctgacaga tgagttctgc tggagaatat tagaaaatgt ctcaaatctc atatatatgc
      361 taatggtatg ctgagactgg ttggtggtat gccggagttt ttaatctgtc tcgaccagtg
      421 tggaaagtgg aggagacaag tcattgcact cgacaattta tgatcaaaca actgaattgt
      481 aaaggaagaa ggacatgcag aaaaggagag taattttctg atttaacagc gttgttacta
      541 caaataaaga aatcttgatt ttgactgcac tcgacattaa atgagtttcc tgtgccctgc
      601 tctgaatttt tcattttcag atttgtataa agcaccctg
//
LOCUS       KCKM01000410            1006 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6524apa ultra-conserved element locus
            uce-2184, sequence.
ACCESSION   KCKM01000410
VERSION     KCKM01000410.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1006)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1006)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1006
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6524apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1006
                     /note="ultra-conserved element locus uce-2184"
BASE COUNT          281 a          223 c          190 g          312 t
ORIGIN      
        1 gcaatgcaat gtcactagta gcttggggtt gctgttgttt tcctcctaga cgtaactgca
       61 gctctgactc tcacaactcc ctctcctcct tttcccctta atcaagaacc ttaaccacat
      121 ggagtaaaca atgatcttgg actaatttgc aatgcttagc taagatctgt ctgtctgtaa
      181 gtgctatgtc agtgtatttg ctgtaggtat taagacagtt agtcatctct gctgctgagc
      241 ctacagcaat atttctacaa cttcaaaggc ccttacagag aataatatct tttgactaat
      301 taaatcagga tataatgtaa caaaggttgt tttttttttc ttctcttcct tgagtttctg
      361 ctttcataac ctaatcaggc attttactgg gtgaaacatc tctattaagt ctctcatttc
      421 tcagccacat gatacaaaaa caggatgata attgaggctg cataattgat gtgggcaatg
      481 acagaatata gaaaagggct ccattagcca ggtcacatca ttagcataca ttacgttcaa
      541 caagattgct ctcttcacct cctatttatt aatgggttaa tccagtccca tcagcctgaa
      601 tacatcattg tttaggtcct ttcctgtaag atacagtagc tcagttttac attaggaaag
      661 aattgctgct aagggcaata aaatcccgta agtgtcagcg ttgcagtggt gctgtctgca
      721 gaagctctca gttcccctaa aagccaaggc tacagtaaag ggacagcacc aacatgtcct
      781 tggtcacaca cgcctggaca gtgagggaat tcctgcaagg atgcacgtga gttgttgtca
      841 gatcggacca cacaggcact cttcaaatga tcccagcatc tagtctgtct ttgatttcct
      901 gtgacggtta ccacatttct cagcaagaag agggagttta ttttctctct cactgtcact
      961 gacattgaca gttattagcg tctgtatcaa aaaaaattca aagcta
//
LOCUS       KCKM01000411             819 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6538apa ultra-conserved element locus
            uce-2853, sequence.
ACCESSION   KCKM01000411
VERSION     KCKM01000411.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 819)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 819)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..819
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6538apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>819
                     /note="ultra-conserved element locus uce-2853"
BASE COUNT          248 a          138 c          142 g          291 t
ORIGIN      
        1 aagctaccat gtaccccatt ccgtatggac aaagtatagc ttggatctgc aaataaatga
       61 gcagttttga gacctaaatg gctttatgtt ttagagtgaa aaaacctggg tttgcagtga
      121 aaacacgttc tcatctttag cagtggggga gctgcctttg ttccacaata ctactcagag
      181 catgggatca tatttaataa agagatattt agttttctat tggaaaagga ttgctgcagg
      241 aagatataaa agcaccttag atattttgat agaacttttg cataaatctt gcatccataa
      301 cctgatctag tgacataaat attagcagct tgtttctatt ttacctgctg tagaaccact
      361 gctgtcctac agcaataacc agcaagggaa tagagctatt tgctgctgtc ataaataaga
      421 cggggtgtca cagctgtttt catttgactg agcagtaatg gagttaatta tacttccagt
      481 ctctctgttt ttgatctgtg tttccaaagt catctaagct tcttgaattc ttgcaatttt
      541 tttaaccctt ttttctactc acctagatta gacatattct ttaattcaaa gggactttca
      601 ttgttattct ttatagtatt tatccatgat tttcttatta gtgaaatgtt attatcatat
      661 gaaaaactct gctaaaaatc agtgtattta tttgtactga gctacattac agatagagag
      721 catggtcttt ttttggaaac cagatacata gacttacttt tattggaaaa taaatctgtt
      781 ttcatctcca gcaattcaga tgacttgctt taagaaaaa
//
LOCUS       KCKM01000412             440 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6554apa ultra-conserved element locus
            uce-4231, sequence.
ACCESSION   KCKM01000412
VERSION     KCKM01000412.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 440)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 440)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6554apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>440
                     /note="ultra-conserved element locus uce-4231"
BASE COUNT          121 a           90 c           94 g          135 t
ORIGIN      
        1 ttcccctctc ggtaaatggc aagcgtttac aacccaacta aaacagtacc aagagaaatc
       61 ctgtgtttgc tctttggaag atattcaata aattatagtg agctgcaaat gtcactggat
      121 tgggaactgt aagagcttta cctttaagtc tttaagtaaa gacttgcagc tggtgcagtg
      181 gctaggtaat ccctaatgat aagctgcttt taatgtgggg gtgaggcagt tttcacacag
      241 atattactgc attaacctta ctccaggtac ggtgcaggtg tgcacagtgt tgtgctttgc
      301 tgccttccct actttattct tccagtgtgt ctgaagcctg ctttaacaga tcctcttata
      361 ccatggtgaa aagattgcag ttcaagccta ttatcaacaa aaacctgcca aaagggctac
      421 attgtcagac tttatgatgg
//
LOCUS       KCKM01000413             792 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6570apa ultra-conserved element locus
            uce-5396, sequence.
ACCESSION   KCKM01000413
VERSION     KCKM01000413.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 792)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 792)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..792
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6570apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>792
                     /note="ultra-conserved element locus uce-5396"
BASE COUNT          283 a          143 c          118 g          248 t
ORIGIN      
        1 gcatataact cactctatta aagatgataa attgcagtag attttgcaat ttattggcgg
       61 caacactatg agatacaaca tgctttaatt ttctattcca aatccttgta tttaatttac
      121 gcatgtctta aaataatttt taaagtttta tcattttaat aaagcgaaac ctctcagtaa
      181 aggcagtaaa cttattactt tgttttttaa aaagtaaata cacgtgtatt tttaggaaac
      241 agacgtcact catatctttc ttttaaaaac aggaatgttt aacctaccag cctgttgcat
      301 ttgagacgtt aaaatgaaaa atgacatcta cgcccattaa tatcgtcaat gtataaacag
      361 cacagcatga cacattcttg agagctgaag gctacaaaat ctctctgaaa cataaataac
      421 aaagcactca gaagcatatt tgatgttgat attcatctct gagaaaaaca ctgctgcctg
      481 ggcttcttat gaaaatagat gcagcccaaa tggatctcct gtaattggtt tcagatagcg
      541 aggtcaaaag aaatatgata caagaaacta ttatgtggaa caggcgaaac aagaatgttt
      601 atacaggcac tccctattta tactgacaag aggtgtatac tttgcagata accagaacga
      661 aaaaacttgc cagaagacaa ccagattctt tcctttttct aactccaaat ccctgtttta
      721 ttttttcaaa tgactgcata ctctaacatt cctgctgaac ataaaataag tttccgaaca
      781 taaagtaagt tt
//
LOCUS       KCKM01000414             480 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6586apa ultra-conserved element locus
            uce-4849, sequence.
ACCESSION   KCKM01000414
VERSION     KCKM01000414.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 480)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 480)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6586apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>480
                     /note="ultra-conserved element locus uce-4849"
BASE COUNT          101 a          110 c          123 g          146 t
ORIGIN      
        1 cccctttgca gcctctgttc ttcatccatt atttaggctt ttctgactgt aacagcaaca
       61 ttcaccttgt ataccttgtg tggggtttaa aatatagata aaagcagaag gtcggacttg
      121 aaacacagat tctgacggtt gctgctgact ttgtctggaa gctacaaaat ctggagctgt
      181 ctgtgcccgg tgatggtgtt tggtacagct ggtggatttt tttgccccct ctggttggta
      241 ttcctgcaaa ctgtcttggt ttttttgatg ttttcattca gcctttcagt ttctaaaagt
      301 tctggggctg gctgcaggac aggggagctg ggctttgagg ctgcaggtat aaacctgacc
      361 caacgtggac gtctcctggt ctcctgtgtg aaacgagcca gggagggcca ggcaggtgcc
      421 tccatccacg attcatcagc ctctaattgg cacctccagt aggagattcg accaagctaa
//
LOCUS       KCKM01000415             870 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6602apa ultra-conserved element locus
            uce-6931, sequence.
ACCESSION   KCKM01000415
VERSION     KCKM01000415.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 870)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 870)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..870
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6602apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>870
                     /note="ultra-conserved element locus uce-6931"
BASE COUNT          290 a          174 c          154 g          252 t
ORIGIN      
        1 aacacgtgcc aagtgtctga ctaacgcaat ttaaaacaga caagactact cacgccaccc
       61 acccccaaaa cagggcttgt aatggaaagt ctgacagacc cttaactgta gtggcactac
      121 tgggtgcagc tataatatta ccctcataat tctactatat aataacaaca aaggaaaaaa
      181 aaggtgaagg gtcattgcgc tttgtcttta gaattaagat ggctgtcttc atccttacag
      241 catactctta attctggaga cacgtcttaa taacctctaa atagttccaa caaaagagcc
      301 gtgtcagagg aatgagcagg ccccaaggtg tttcaactgg agtgttttca tctgccttta
      361 ttgctctatc cctctccaga attaaggcaa taacctgtga taaattattc aggaactgct
      421 acagggatca aagcaaaatc attctgttaa agtgctgttt gcaacatttg gcacttagtg
      481 tgaaaacttt taatgtgtgc aagctgaaaa tcaaggattt taaataattt aacagcatgg
      541 agtttctaca aaccagctaa agatagcatg ttgctattta actgcttttt cctcagatcc
      601 tttttttcag gcgtttctag caaatctgat gatgtcacaa ctacaaacaa agtactactg
      661 agattcctgt tacccagtcg atacatcact taactggact gtcaagagaa accttgaaat
      721 ttttagaaga aaattagcca ctccactgtt ttaatactgg acatttttcc tgttaataca
      781 aaattgtgag taaggaagta gggaaaaagg aaggcaaagc acataattac ttaagccatc
      841 ttcaattata tttgatctct ctggaaaaga
//
LOCUS       KCKM01000416             312 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6617apa ultra-conserved element locus
            uce-2785, sequence.
ACCESSION   KCKM01000416
VERSION     KCKM01000416.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 312)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 312)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6617apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>312
                     /note="ultra-conserved element locus uce-2785"
BASE COUNT          104 a           50 c           35 g          123 t
ORIGIN      
        1 gaaaatcata aacccttcca gaacattata ttttatgcag tccaaaatgt gacacatggg
       61 gtctttaata attcactgct tgttaacatt aaacaactgt taacatgctc aaataattag
      121 ttatgcttgc ttgacatgtt tgcatcttta ataattgatg catttatctt aattactaac
      181 agtattatgg tcgtaatatg catctttttt ctatcttaaa attttaacaa aaactgactt
      241 tttgccaaaa atgattatcc tctaagtttt aattactcat tgtaattaaa ttgcaagctg
      301 cactatttta tt
//
LOCUS       KCKM01000417             805 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6633apa ultra-conserved element locus
            uce-5179, sequence.
ACCESSION   KCKM01000417
VERSION     KCKM01000417.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 805)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 805)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..805
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6633apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>805
                     /note="ultra-conserved element locus uce-5179"
BASE COUNT          261 a          173 c          142 g          229 t
ORIGIN      
        1 tgcatacttt ttccattttg gtgagaaata gttaatgttc catagtcttt gatttattta
       61 ttaaaagtat tttaccagga aacacaacag agacaggcct tctcatttac agtgagaccc
      121 cagagagcag taaatttaca tacacaaagg actagcatca acccctgaac ctttaatgtt
      181 tattttgata gcccaccctg ctggtaaggc cttttgttaa gaagccaggt acaacaaggc
      241 aaggatccaa acaaacaaca ctggtagctt tgttgaccag gtcatatgat gtcctgccct
      301 tgaacagtaa cccttgtctt ttaccctttg ccccgagaaa atgaagttag ttagagtccc
      361 tgtggcagat ttagcatttc ctttcagtgt ctgccaatct atcaaaattc agctaccgct
      421 gtgaacccat caactcggag caaaaaagaa caaggcttac cacggacccc ctcaaagtag
      481 caatcattta tcccttcctg aactttagct gacctttgta agcacactag aagttgaagc
      541 atgtagcacc ttgtcagata ggatctaggg gttttctcgc tccccactca gccccaaatg
      601 aaagctttta tttcattttc ttaataaaag tgttgcattt aggaacaacc acttgaaagg
      661 aaataaagtc ttcagcgaga ggatgcaatt gctttagcat catgcaaaag aatagaaaca
      721 aatataaata ttctgtattt actaagccag ttagcatcac tggaggaaat aaacaaaaca
      781 agtggattct attcaaaaag attta
//
LOCUS       KCKM01000418             510 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6649apa ultra-conserved element locus
            uce-2745, sequence.
ACCESSION   KCKM01000418
VERSION     KCKM01000418.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 510)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 510)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6649apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>510
                     /note="ultra-conserved element locus uce-2745"
BASE COUNT          150 a          105 c          108 g          147 t
ORIGIN      
        1 tttattcata agccggctgt aatttcaaag gcatctaggt gacctatcta aagctaagtg
       61 aatccctcac cccggaggag acccactcct cttgatccct ctggggagct ggggttgggt
      121 ggtggaggag ttgccagggg agttacgtgc agccggacaa tgagaaacac attgacaaag
      181 tgttcacatt attggctgat aggtctgcat cagtcactca ttcagaagca caaggtctaa
      241 attgcagaac caattaacag cactaatagc ccttgcctga attaatcttt gagacaaaag
      301 aggagagaag tggaagagct attagcaaat caagctgtac catccctgct ttattgcggg
      361 aatctaagtg tctgtatttg gctattatga actgactgca attacagccc tcatttaaaa
      421 tgattaagtg gttataatta tttttcaatt aaaacttaga tcttccattt atacaacatt
      481 gcaggcttca attaaagtcc tttttcctcc
//
LOCUS       KCKM01000419             579 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6665apa ultra-conserved element locus
            uce-5588, sequence.
ACCESSION   KCKM01000419
VERSION     KCKM01000419.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 579)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 579)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6665apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>579
                     /note="ultra-conserved element locus uce-5588"
BASE COUNT          148 a           96 c           99 g          236 t
ORIGIN      
        1 tttttccttg aagttaatga tagtccaaac tctcccctac tgcttttgtc aatatatttt
       61 ttaaaggcaa gcattagact tgggtttgcc tttgtttttc ttttctttat tcttttttat
      121 tctttttctt cttcacagct tcaggcccaa agacttcttt taatagacat tagttaaggc
      181 ctggaattga gtagacattt gtgaaggaga ctttaagttt ggaacagcat tgtcctttat
      241 agtttttcta tggaggaaaa aaatcttctt atgagaataa agactttagc ctaatctctt
      301 gccatctgga aaatgtagaa gccagaggtt gttggcacta ggtcacatcc cttatgtaaa
      361 ctgtcaaatt cttttcatat taatggcata tcaagttaaa cccatgaggt ttgtcactgg
      421 ccagagctaa tttattgatt tttttatttt tttaatttgg ttctgtccta ttagtactgg
      481 tagcattgac tgattttgga taaatgttag tcacctttga tttagtacag aattttctag
      541 tctttcccag ttcatcagtt ctttagtagg tgatcacgt
//
LOCUS       KCKM01000420             309 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6680apa ultra-conserved element locus
            uce-3352, sequence.
ACCESSION   KCKM01000420
VERSION     KCKM01000420.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 309)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 309)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6680apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>309
                     /note="ultra-conserved element locus uce-3352"
BASE COUNT           63 a           84 c           49 g          113 t
ORIGIN      
        1 cctctgtata atgctatttg aatctgtact ttttgtttgg tggtaagttt taatagttat
       61 cctttgagga ttttcccggc gagcttatct gaatacacca acagtctttt ttgtaatatt
      121 cgcatttccc ctttggttca gccgagccca ctgacagatc attcaaattc aattgtttta
      181 tgtctaagcc gaacagctaa ttaaagtagg gatgattaac ctgactggca gtgtcgctct
      241 ctctccctcg ctctctcgct ccctccctcc ctccctcctg ttccaatcag tctttttctc
      301 acactctcc
//
LOCUS       KCKM01000421            1002 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6696apa ultra-conserved element locus
            uce-7469, sequence.
ACCESSION   KCKM01000421
VERSION     KCKM01000421.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1002)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1002)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1002
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6696apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1002
                     /note="ultra-conserved element locus uce-7469"
BASE COUNT          344 a          170 c          195 g          293 t
ORIGIN      
        1 tttaaaggac tccaacccct gatgatgttc ttatgtgact atagaatagg acctaattta
       61 ccaatcagac acaatgaagg atagaatctc cgaagagaga aggaaattta gcactgaaaa
      121 aggatagaga atagaagata aaatgagtga aagtacagga gttgcaatct aagttcaaat
      181 aaagtatata tgcttgtctt attgttagta tttctctcat ttcacctgct ttgctgctct
      241 catgtactct tcaccataaa aagttgccca cagttacagt gatgcttctg gaaggtgagt
      301 atatgtatgt caggagaaaa aaataacact tgcattgaag gatgatttaa gattattcat
      361 ccacacttcg gtgtgagatt ggatctattg taaccttcct aaacctttgt tacctttgta
      421 atttaaactg acaggttaaa tgctaatgca attgataggg gtgaacaact ggtcaaggaa
      481 caacctgatc tgactgtata atgcatccga gaattgcaaa aatatgcagg tcagacgtaa
      541 ttttgacaga aaatggctcg ctgcaagggt ttatgtttcc ctggatagtc ttaaaaaaga
      601 gttggactat agtaagtacc acattgcttg aaaaaaatat caagttaaac ttaatggaaa
      661 aaatccaagt tctcaatatc ctcagatttc attatcagtt tttactggag ctaggataat
      721 aagattacag aattaaaaga aaagttatac ccattttctt cagctcagca gtcctaatgt
      781 tcaaaaagaa agcgacactc attcctcacc ataaatacag agtgaaaact gcttggaaaa
      841 agaagtggtc tctgaccgta tagagccaga tttggtcctt accgaagtag aaattctgtt
      901 gcttcaacag acactgggtc atggcaatta cttgtagcag taggtaaaga aacagtctct
      961 cgtgagctaa tcctggagtt aatgactttc cacttggtgt aa
//
LOCUS       KCKM01000422             979 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6711apa ultra-conserved element locus
            uce-790, sequence.
ACCESSION   KCKM01000422
VERSION     KCKM01000422.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 979)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 979)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..979
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6711apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>979
                     /note="ultra-conserved element locus uce-790"
BASE COUNT          297 a          156 c          213 g          313 t
ORIGIN      
        1 gttgtaaaga taacagagtt taaatgtatt tctgtaggca tgttactgcg cttctttgtt
       61 catttctatg acatggagat cattgaagaa gaagccttct tggcatggaa agaagatatt
      121 actcaagagt ttccagggaa gggcaaagct ttattccagg taaaattact acacatttgt
      181 gatttgtctt ttataatctc tgctgctggg gtgttggaga acactgtgat gaggcaaggc
      241 gaactaaaca tttctttact agagacccac atttactgca aagtgtggct gatcttaaag
      301 gagttgggag gaaaagcagt gttctgcaga agtgtagagt ggggaaataa ttcctgctcc
      361 ttaaatgagt tttgtgtacc tgcaggtaaa ccaatggcta acctggctgg aaactgctga
      421 agaagaagaa tctgaagaag aagctgacta aagaaccagc caaagcctta aattgtgcaa
      481 acatactgtt gctatgatgt aactgcattt gacctaacca ctgcgaaaat tcattccgct
      541 gtaatgtttc acaatattta aagcagaagt atgtcaatag gatatcctct gcaaaaggtt
      601 tttgtagtat gtcttaatag tctacaataa aaatatttta gagtatcttt aatgtttaga
      661 taacagtgta ttagcagcat gcaataatga catcataagt tctcgagcag aagcagtctg
      721 ttgcaagggt cttctttgcc gccagttatc ataggctgtt tttaagttag aaaactgaat
      781 agcaacactg aatactgtag aaatgcactt tgctcagtgt aatacttgag ttgttgcaat
      841 atttgattat ccatttggtt gttacagaga atccttaact gtaatcgatg gttgttgccg
      901 taatagtata ttgcctgtat ttctacctct agtaatgggc tttatgtgct aggttttaat
      961 atccttgagc ctgggcaag
//
LOCUS       KCKM01000423             632 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6726apa ultra-conserved element locus
            uce-4176, sequence.
ACCESSION   KCKM01000423
VERSION     KCKM01000423.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 632)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 632)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..632
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6726apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>632
                     /note="ultra-conserved element locus uce-4176"
BASE COUNT          169 a          183 c          123 g          157 t
ORIGIN      
        1 ggcgtgcggc cggagacgct gcccccacga caagaggctc ctcgcctttc agcacgaacg
       61 tgcacaaaac aacaacaaat aacgcgctct tcgcccgcac gacgcttccc gctcggcacg
      121 cacccggggt ctgcggaagg gtgcccaccc gaaatcggcc ctttctctgc ttaaaaacaa
      181 acaggaagcc aaacaaactt acctgctgtt gttgcagatg cagcagttct actgtgctta
      241 cttcagtgct cgtgtcacca cttgatcttc catctctgct gccagcatct aattggctgc
      301 ttagagtgct cattccattt tgattcattg aactgttgct tattgtctct gtcgcagatt
      361 cctgcatcat gacttaatac ctaaaagtga ttaagaagta tcaattaaca cacgcgttac
      421 accttcacac ttccattatc aagatgtccc tctctgccaa ttacacagac agcatcttta
      481 gaagaagaaa aaagcctccc ggagccgttt accgagaaat gcgatgcaaa ctctgctttc
      541 atacagatac taatcaccgg aattatggtt tctataagca atctcggtgc gcttacattt
      601 aacggccaaa ataacacccc atgcatgcag cg
//
LOCUS       KCKM01000424            1019 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6741apa ultra-conserved element locus
            uce-5277, sequence.
ACCESSION   KCKM01000424
VERSION     KCKM01000424.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1019)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1019)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1019
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6741apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1019
                     /note="ultra-conserved element locus uce-5277"
BASE COUNT          326 a          193 c          185 g          315 t
ORIGIN      
        1 ctgaaagcaa agattaccag ccttaacttt caatttatca gaaccttgcc atgattcaaa
       61 cataggcgac tctgctgaaa tgtggactgt cagttttctc caccactcca caatgcccaa
      121 gttaaccaag tgtaaagcag tgcccatgca aatatctgca cacctctggg gtaactcctc
      181 accagagaga actaggatgc cctgagatgc aggtgagccc gtaaacatga tccagcttcc
      241 atcagtgtga atggttccag ctattcaatt tgaagtttat gcggtacaga ggcaaaacag
      301 actcataaca ggagcaaatt ggtattaaac gcagtgtctg gacagcagaa gatccatgtc
      361 tcacagagga cttacatata aagagagtat atacaatggc tgtgttgatc atttccttcg
      421 gatttagaga aacgagcaac tttagcttta cagacttcat ggttgcttga tctcactaca
      481 gtaaacagct ccatattttt ccttttcatg ttttatcctg aagcaacaga gcattacatt
      541 aattgacttg tcttattaat tcaataagct gcttccaaga tgaaatgctt agctatgctt
      601 gcttgttttt ggcacttttt ggttgttgga aggaaagctt taaggctaga attgctctga
      661 tgttttccac agttcactga ataattttat gcactactga agatttgcca catttggaat
      721 tactgcaaac tgctactttt tcatcatatt ataatctaat tcacactttt agtatgataa
      781 gaaaacattt aacagtttgc atattagaga agtgtatttg ttctgcaatg aatatgtggt
      841 taagaattca ttataggcca ctcctttcta ggatttataa tttggacata agatgcattt
      901 agaagattaa agatgacata gaagccaccc cattcaaatg aattatatag aagaaaattc
      961 agggagaaaa gattgacctt gcactagata catagcaaaa ataatttact tcaaacttg
//
LOCUS       KCKM01000425             943 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6757apa ultra-conserved element locus
            uce-3863, sequence.
ACCESSION   KCKM01000425
VERSION     KCKM01000425.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 943)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 943)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..943
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6757apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>943
                     /note="ultra-conserved element locus uce-3863"
BASE COUNT          352 a          161 c          190 g          240 t
ORIGIN      
        1 ggtgcacaat tattggaaac taaaaatact agagcctagc aatccatttc aaaggatcat
       61 ccgaaaatct gatattgcct tttatttatt tatgctttga tgaactgcta attgacttca
      121 tctctgaggt cacataaggt cataagaaaa taagctgagt aaagtgcttc agccagatca
      181 gcttccacaa caaaaaaagt tgacggcact ctcccttgga gtaaccagat cttcctgctg
      241 cttacaagga tgcgaaaaaa aattgctcgc ttaaagtaat tcaagtgaat gcctggggga
      301 aagcccgcct agagagcaga ttttgaaaga actagctgga gcactgttgt ctcagcattt
      361 ccacatgcaa agagcgggga aaaaaattaa agaaaagaga gtggatataa acagtactgt
      421 atatcgtgtt aatacagccc ttgtatggaa gttataccct tcagtgacct tctagaattg
      481 tatcagcttg ctacatgcat gtcttcatag tccaaacatg tgtgaaagag accattcgtc
      541 tacagaagga tggatttctt tttgttgtcg ctggaactgg gacagcagac atgtatattt
      601 gccacattgc aaataaaatt acttcaacat aaatcacaga aagtacaaaa gctttgataa
      661 gtccagggta aaatttacca ataataaatg atgagatctt ccacacatgc ttttggtgcc
      721 caggcacgag ccaaaagcag tgcaaaaaaa gctttcatat gaaaaattaa tataaataag
      781 gcgtgttcat gatgattact taaaaggaag ataaaaagaa agaaaagatg gttcagaaaa
      841 gggggcatcc tgccaaacat attagagata taaaacatgg aattggaaaa agggggtaaa
      901 agaaagatgg actgtgataa aatacaaaag aacaaataca aac
//
LOCUS       KCKM01000426             732 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6773apa ultra-conserved element locus
            uce-2705, sequence.
ACCESSION   KCKM01000426
VERSION     KCKM01000426.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 732)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 732)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6773apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>732
                     /note="ultra-conserved element locus uce-2705"
BASE COUNT          237 a          134 c          151 g          210 t
ORIGIN      
        1 agatgggggg gacattgggg aaggaaaagt caagagatgt taagccatcc gaagcacaaa
       61 gttcccatag cagttctgtc tgcctgcagg cgtatggcaa gatcagcaag tacatctttc
      121 ttagacaccc aggcaggcaa acatctctga aacacagggg catgaaactg ctgccgcggc
      181 atccatcatc ctgtggagga cagtgaaaac aagtgctgtc atctttgaca ttttaattga
      241 aaagaaagct tacacagatt tcgaccttaa gcagtgtgtt tatacaagtg tatacagaga
      301 aataatctgt cagctcagag caggctcatt gctataggag ttggtttagt agctgaacaa
      361 tccaacatta gctcacacac cttgccttgt tccatgcctc aataattttt agtagaaata
      421 ctttgcctag aggcatgcag ttattaaaaa agaggctcag cttgcttaaa gtctggaatt
      481 attagctcat ggtaacaagc ctgcactgga gaaactgttg gttctttgtt ttcatgactt
      541 tgctgtaatt caccgtctta tttgcagaga caaacttctg ctttgtttgg gaggttaaaa
      601 aaaaaaagaa caaaaaaaag gaaaaataaa tcacttcaaa aagattcttt ttcattttta
      661 ttatagagca tggtttacaa agctctttta tcttaatatt tctaaattgc aatggtccaa
      721 ataataaggg ta
//
LOCUS       KCKM01000427             850 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6789apa ultra-conserved element locus
            uce-2771, sequence.
ACCESSION   KCKM01000427
VERSION     KCKM01000427.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 850)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 850)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..850
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6789apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>850
                     /note="ultra-conserved element locus uce-2771"
BASE COUNT          293 a          142 c          157 g          258 t
ORIGIN      
        1 tatgtgcgta cctcgatggt tccagattta gccatatgtg ctaaattaga ccattaaaca
       61 ctgtaaagca agcggcgtac tgaaatgcta tcacagcctt gtaatttata ctatgttatg
      121 cagggtagaa taagtttcta gtagtaaata gggtctcctt ggatgactag tctctaacag
      181 tacattttca cataattaaa gtggacacgg tttagaaaaa tgaaaaggct agaatataag
      241 gctcagctgc aaacaatatt aaatggcatt atcaataaca gagatcccag ggtttgcata
      301 ttaattgtaa gaaggtgcta atttgagtgt tttaagcttg cattcacaag cttgtttaca
      361 tgctttgttc cacctggacc tgtttggagg tttgtcaaaa acctaacaag cagaaaaaga
      421 ttgcatttga aaatacacat acatgtttaa ttaagccagg gccaccgaac attcctcaat
      481 atatttagct gttgagattt aagcaccacc agagcatcag gcattatcac cttttgaagt
      541 actgcagaat ctttaatatt taaagcacaa agcagacttt aatataaaat tctagcagac
      601 cacagaagat taaagacgca ttataaatgt gacagtttgt aaatggaaca ccagtattaa
      661 agggaacccc cctgatattt tatagcatat ttttcaggtg tatactaaat tataaataca
      721 attaaatagc agtaattatt ctctgggagg ggatggcagt ttaactattc tagaaaatag
      781 tgattaacta taatgtagga aagtggtaat atgtgtttta ccacactgtt cttgcagcca
      841 aacttcacgc
//
LOCUS       KCKM01000428             990 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6805apa ultra-conserved element locus
            uce-257, sequence.
ACCESSION   KCKM01000428
VERSION     KCKM01000428.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 990)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 990)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..990
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6805apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>990
                     /note="ultra-conserved element locus uce-257"
BASE COUNT          324 a          157 c          184 g          325 t
ORIGIN      
        1 ggacagctgt attccatagt attcatcaca agctaggcct gttgatttca aataaatata
       61 tgaaagatga aaacttcaaa atctatactt caaatggggg ttttatttga atattttaaa
      121 ggacagcaat atgtcctgtg tttgactgtt cagcttcagt taaacctttt actggtatgc
      181 aaacaagaaa ttaaatgtct gtaacagata tctgcatttg taactaaatt aacatcaaaa
      241 ttttgaatta agaaaatgta ttgacatcaa aacaaggctt ccttttacaa catgtttcta
      301 acataataca cattgatttc agtccaactt ttagatgcga taaaaaatta gaacattgtt
      361 ataattagtt cagggagaac tcagaagtaa acttacttaa tttgcataaa ttgccattct
      421 gttatcttta aaagcaaatg caaattggct ctgtctgata tgatgatggt tatttggctc
      481 aaaagtgctt caatttgcgt agcaatctgg tgtcgtctct gcagtgaggc gatcccaggt
      541 aacatacaaa tcctgaatta ttccagaaat tagtatgttt aaagcatcaa tttaagtgct
      601 aattgcagta gtaatgagaa aaagcagtac tactgtgaga tttgcatcta ctgccccatc
      661 agtatgcctg gaacggctac tgactggcag aggatttggc tgctaattaa ataattgtat
      721 gcatggcagt gttctcgtct gattcaatag atgaagatta atcctcagat aaatatgttt
      781 ggctggtatt gaaatgtctt agcagtttct tcaaaaatag cttgtgtatg tggtgtgtat
      841 gttcacactg taaatgactc tacgcctcta tatatctgtt tgtaaataca gatgcatatt
      901 aggaggaaaa acaaagtgtc ttggcatcac ataaggataa atccttcatt tccatgagtt
      961 gggaatggcc gtactgggta tatcaaagcc
//
LOCUS       KCKM01000429             425 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6821apa ultra-conserved element locus
            uce-4265, sequence.
ACCESSION   KCKM01000429
VERSION     KCKM01000429.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 425)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 425)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6821apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>425
                     /note="ultra-conserved element locus uce-4265"
BASE COUNT          147 a           70 c           66 g          142 t
ORIGIN      
        1 gtgaagaatt aaactactgg gagtaataat atgggctgat gcactcaata tagcagtaat
       61 gccctccaag aagggtagga aataattcag ttcctctagg ctgcacagaa gctaaataca
      121 gtatgacaag aaatagtagc agtactcatt atgtctgatt gctaattacc cctttgaatg
      181 attcagttat gcctgctact agataattag tttagtaatt tatggctgca gcacaaacta
      241 gtattttaat tttcactgca cagttttcac aacacctaca gttcaaataa tatctctcct
      301 tttattcaat ttcaaattgc tttttttgat agccgatgga gagaaaaaaa acaagcagtt
      361 ctttcaattt tctagcataa atttaatgtt aaattacatt tatgtaattt tatacaaatg
      421 taaac
//
LOCUS       KCKM01000430             843 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6835apa ultra-conserved element locus
            uce-7866, sequence.
ACCESSION   KCKM01000430
VERSION     KCKM01000430.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 843)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 843)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..843
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6835apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>843
                     /note="ultra-conserved element locus uce-7866"
BASE COUNT          223 a          147 c          170 g          303 t
ORIGIN      
        1 taaaacgagt ctatgatatc taggatgtca catttgaagt ggaaattgac ctgtgttgat
       61 ttttatacac atactccttc catatttatt gagaatggaa aacaaagtta tttgtcatgt
      121 aaaatcctag gcctttgctt gggaagtcca gactgaaatc atagttgtaa tgtgtgtgta
      181 gactgaaaac aaactttcta ttctagtcct tctacactgg ttttgttcag gaacatagtt
      241 gctatatttt cccctgcccc ttatttggga catcgccttt tttttaaata catgctcagc
      301 attttgtaat ttttctcttt ttaggagaag cagtcctgcg ccagctgtaa cggcagcatc
      361 tgtgaccaac atacaggctt ctgaagtcac tgtgccacaa ataaattcca gtgaaagctc
      421 agggggtaag gaaaatggca cagtatattg tttctattga tttttttggt agtgtttata
      481 aatcagtttt tcttccagtt tgaggtcttt acttaccaca tgctgtaaca tgttttcctt
      541 gataccatta ggactcagga aatcatggtg gaatgttttg caccatcata tttgttattc
      601 ctttattctt agggattata tttgccattc acagtggtaa tagttttctg atgacctgat
      661 gcaggtctgt ggtttagttg gtcaaataag gaaaaactat cagaagctgg gagacgaatt
      721 atttttggtc cattttgtag tttaaaccag aggtggttct gtactgcctg gaaagatgta
      781 agcagaacac atgctccttg ctggtgtctt ttcaaatatg ttccactgtg tgtgctgact
      841 tca
//
LOCUS       KCKM01000431             936 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6849apa ultra-conserved element locus
            uce-4707, sequence.
ACCESSION   KCKM01000431
VERSION     KCKM01000431.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 936)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 936)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..936
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6849apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>936
                     /note="ultra-conserved element locus uce-4707"
BASE COUNT          256 a          244 c          204 g          232 t
ORIGIN      
        1 atccacttat gaggaccaca ggtaccaggt gcagagcgtt ttcttcagct gccgatggaa
       61 acaagatcct catcctttca gtcaccaccg ggcacaaggg gctcatttca agcaccagct
      121 ccgcttgaac acatcacact ggggagcagc tcgaagcctc ccatttaact gcagcaccaa
      181 acccaagcac gtggaactgg taagagccag gagtgaaagc ggcttgagca gtgccgctga
      241 gcgtggccgg cagcctgcac aaagaggctg agtcattatt ttattagcag gccccacaac
      301 tactttaatg tgggcttaga ctgcaaaaac aaaaacatac ataaaagcat ttggaattac
      361 ttcataaaat actaaatcac aatattaacc gactgacctt tgctctgtgc agacctgcta
      421 attttagcaa ttacagccaa caacttgaac atatcaagtg ggcaactgtt taacaataat
      481 gacatctgct tggaaaatcc aattacgtct aaacatcttt aaatccccac taggggatac
      541 ctgctttctt tttgcaactg ttagtctctg cctaatagga ttttaaactc gcatcctgct
      601 gcacactgtg gtggcagtgg cccctctccc tggagtggca gcagcaggac caccagccca
      661 ttaagcagac agtgagagtc tctcctcgga cagtgatgga agcaatttgt tttttcaaca
      721 gcctaatctg atagaagggt gcattagctg gatccctttg ctcccccctg cgcagatact
      781 ggtcccctct gcagcccccc aaggttacag gtgatggaca caaccagggc tgcgctctgc
      841 aaggaaagat cttgctacca aggcaggctt tgcagccgtt ggtgcctttt gtagggtaac
      901 taacataaga ttttttttct tgcaatgtcc tcagat
//
LOCUS       KCKM01000432             647 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6864apa ultra-conserved element locus
            uce-696, sequence.
ACCESSION   KCKM01000432
VERSION     KCKM01000432.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 647)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 647)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..647
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6864apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>647
                     /note="ultra-conserved element locus uce-696"
BASE COUNT          251 a          103 c           86 g          207 t
ORIGIN      
        1 catccaagag tttaagaatt actactgtga catatttcgc cttttctcta tgtatactga
       61 aaactaaaag tggctagata acaggaggca aaaataacta aaaagaagag acacgtatct
      121 ctagtctaaa caaaacagtg tatttttaat tgaaataaca ttcggtagaa cagcacatca
      181 aaacatttaa ctttttcaaa gttttcagca ttaaagaatt aagatgaaac acaattagga
      241 aacagaaaac tgcaacattg tagaggatgg tcactttttg tatgtcatgt ggctttaaaa
      301 acaagtcaga taaatgatga tgccattaaa actgaactaa ttaaagaaag cttcttttaa
      361 gaactcatta actgcaacct catttgcata atgatgcata ttaattaagt tttaatgaat
      421 ctgaatttgc accaagccta ttcatgttgg ctttgaaaca aattgaacaa attagttaaa
      481 agctttttgg aatctacttt tcacaccaaa caggatatga atgcaatcat ctccacaaaa
      541 aagaaatatt tttcttttaa tttaattcaa aggtatgcag acccatctat taattatttt
      601 taaatgcaat aatttccacc ttttctttgc aaaatcaaca ttattac
//
LOCUS       KCKM01000433             392 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6879apa ultra-conserved element locus
            uce-2352, sequence.
ACCESSION   KCKM01000433
VERSION     KCKM01000433.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 392)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 392)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6879apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>392
                     /note="ultra-conserved element locus uce-2352"
BASE COUNT          105 a           54 c           81 g          152 t
ORIGIN      
        1 caatactttg gttcctgtat aaatatctgc cgcattttcc accaggagtt attgctgtta
       61 tatattttac agacacttta ctgtcatcta agtggtttat tttattccca cggctaggag
      121 aaaactacaa aaggaatttt gtaatctgaa tgtgattgtg ggcagagagt aatgttttga
      181 aaaggagctg agagtaaatt atatcactgc tttattgtgt ttaaggagac ttttctattg
      241 tgctaggagt taacattagt tctcaaagtt attaactgga tgtggtttta ttatgactgt
      301 gtgttttgtc aatatatgac tttttttgtt aggtttttcg gtgccagttg ggctgcagct
      361 ttggcaccac taaagtttaa atatgtaaac tc
//
LOCUS       KCKM01000434             287 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6894apa ultra-conserved element locus
            uce-6904, sequence.
ACCESSION   KCKM01000434
VERSION     KCKM01000434.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 287)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 287)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6894apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>287
                     /note="ultra-conserved element locus uce-6904"
BASE COUNT          104 a           49 c           51 g           83 t
ORIGIN      
        1 atagttttgc aaaaagaagg cacggtaatt tcatttttct tgacttctat taaaaagatc
       61 aatacatatg attccaaaga gtctcggctc atgaaaagat ggagctagtc tgtaatcaca
      121 tctgaaagta ttggttgtca ttagcagtaa gattgatctg taaagacagt cagcccagag
      181 tgaaagtact taaaaatttc cattggacta ttgctgaaca acactgccca gcaacctttc
      241 accttgcaga taattaaata cagataaaga attaccatat tagaagg
//
LOCUS       KCKM01000435             991 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6908apa ultra-conserved element locus
            uce-3825, sequence.
ACCESSION   KCKM01000435
VERSION     KCKM01000435.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 991)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 991)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..991
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6908apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>991
                     /note="ultra-conserved element locus uce-3825"
BASE COUNT          242 a          231 c          235 g          283 t
ORIGIN      
        1 ctaagagctt ttcttcttct ctcctgtgct ctctccctgc ccacatggaa ggtgcacggc
       61 cttctcctga ccacccagtg gccaaaagca gaggagcatt ttattccaga ggctggtatt
      121 tcactatcca agcgcttttg aaataaggaa aaatgggtgg aaattgcagt gggcttagca
      181 gacaaaattg agcagttgac tgtggcaagg cacacagtac ttaaatgcag gagctgatct
      241 aatcgttgtt ctcgaggaag ctttttgctg cattttagca cacaaagctt ttcgttttct
      301 cttttgtggc ttgagctgct atttaagaaa gcaaaaatca ataaaccttt ccagctttca
      361 atcttttgcc ccaaaaggtg tttttttggg tagtgttttg tcattcataa gctgtggcga
      421 caaatccttg acatcattcg tggataatat cgatcagctc ttccgttgcg ccaaaggaca
      481 aatagaaatc atttatctgt ctggactcca aaacagcaaa agacaaaggg ctctgccagc
      541 cacccatgac aatcagcagc tgaaggtatt agcagggggt caagttcaga ggtcagcggt
      601 caaacaggtt gtcatcagtt tctcacagct atcagagtgg aaaaacccag ctggttctta
      661 ttagccaaat ccggggaggc tgtgggtgct tggtggctca gggtgcagct gctgcccctt
      721 cctcacggag gacgccttgt gggtttggtt ttatttattg caaagacagg gtcttaactc
      781 cactcagctg cgtcccaacc gtcttttctc aggtgtacgt gctgcgttaa gggacggtat
      841 ctttcccacc tctttgtcct tgttcttcac catcggtgtt gccaaattag agttaacaaa
      901 tgtttccatc aagctaaggc atgatggtgt atgtgctcag tccccagagg gagagctccc
      961 ctggtcttaa ctccgcagag ctatgagcag g
//
LOCUS       KCKM01000436             682 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6924apa ultra-conserved element locus
            uce-2971, sequence.
ACCESSION   KCKM01000436
VERSION     KCKM01000436.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 682)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 682)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..682
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6924apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>682
                     /note="ultra-conserved element locus uce-2971"
BASE COUNT          179 a          144 c          113 g          246 t
ORIGIN      
        1 ttttttagtg tgacattgtc cctttaattc caagatctat agctggtgta gctatggtaa
       61 tctatttttc tttttaagtt ataaataatt gtaacaggtg tgcacatcta aataaggtga
      121 ctattctaca atctttagga agaggaagta gtcccacctc gtcctccact ccctcggtcc
      181 tatgacttta cagagcatcc tcccataatc ccccctctgc ccagtgatag cagctccttg
      241 ctctgttata gcaggggccc agtacatctg ccagaagaaa agaagattca ccaagttcaa
      301 ggatatcaga gaaatggatc ttactgtgta agtggctgaa actgccacat tgttcttgaa
      361 gcattccccc ttcctttgca cagtcaccat ttttattttg tcatctggct actttcgtgt
      421 tatgttttta cttttgttta cttagcttta gtgaaagctc catcatttgt gcttcacatt
      481 ttcctgtcat gtgttctgcg catatataaa atgtcttaag acttaaatgc ttgtatctgg
      541 gtaaatttca gaaaatttga ttcttctgct catttataaa actcgaggct cagaatcagt
      601 ttttgctaaa gcttcataca aatttgtttc ctgaaggtca ttttaaaaac aaaaaacacc
      661 tccgcatttt tgtgtcattt tt
//
LOCUS       KCKM01000437             776 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6938apa ultra-conserved element locus
            uce-4598, sequence.
ACCESSION   KCKM01000437
VERSION     KCKM01000437.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 776)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 776)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..776
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6938apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>776
                     /note="ultra-conserved element locus uce-4598"
BASE COUNT          193 a          209 c          149 g          225 t
ORIGIN      
        1 actttgatta aatacggcac taactgacct catcttctgt gtaagaaggc ggtgaagggg
       61 gcagtccatc gtttgcagac gacatacaat ctgtcttctc caattagata tgctttgcaa
      121 caagtgcagt ggatccattt atttccatac tgcaataatg cagataaatc caactttggc
      181 tccagtccca ccacttccaa agctggggct ccacattttc agtccttgcc cttatttttt
      241 ttttcccctt ctgctgcaaa atgtcaccaa tttactttag cctgggggcc catttcgagt
      301 tttactgcta atatacgaga aatgcatttt tcaagctgtt accacttaac tgtactgata
      361 tcagccactc aggggacaca atattgttta cacatcctgc tctatggaat aagcacggat
      421 gccaaaactc tgcctgcgtt gtgaaggaga cgtttactct ctgttttatg agatttcctc
      481 gatttgtggc tgtctcaatg gtcgtaaaaa cagctgtaaa tcaaaagagc accacaaaat
      541 tgcaataaca actgtcgaac tctgctctaa agagcataac tcccagcaac agaaggtgga
      601 aagctttttt ccgatttaat accaggtgtg ggggagccct agcaagccta cgtgctgcac
      661 cgtgtgtgcc cacagtcacc cacgctccag ctcagccaaa gccctcttct tgggctgctg
      721 ccctatcgct tgcccctact ctgccccacg tagtcccctc tggtctcttt cctcct
//
LOCUS       KCKM01000438             995 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6954apa ultra-conserved element locus
            uce-6521, sequence.
ACCESSION   KCKM01000438
VERSION     KCKM01000438.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 995)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 995)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..995
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6954apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>995
                     /note="ultra-conserved element locus uce-6521"
BASE COUNT          290 a          217 c          206 g          282 t
ORIGIN      
        1 aagtggaaag gaaaaagaga agacactgta tgtatgtctg agttgcgtaa caatatccca
       61 ggcaaaacac agcaggccct attactttct aagataagct tgcagaaggc gatgtggtta
      121 atgagagctg tagctggccc ctgggcatag ctgtcctctg cagcagagca caggctctcc
      181 aaaagcaccg actccctctt ctagctcata caaacatttc tgctggaaac agagtcaagt
      241 tggatctctt gtagacagtg tactgaggtt accaaatcct gccacgttaa aagagcggca
      301 agcgctgcaa caacagctgt tcctaacagc tttgttacaa atttatgaag tggaagtcct
      361 gacacaggaa cccaagatga agtcaactcc cttactctgt caagtgcata tttttctcat
      421 tattcaacac ttaacgggga tgacagccaa gattaaatag tcactcatct tctgcgccat
      481 tatagctcct gcatgattgc ttcaaattaa atctaacagt caatgaaata gtcaatattt
      541 aatttactca ttgcaggtgg cgatttagct ccagttacga tatcatttaa tgacagaaat
      601 attggtattt atcacttttt atgagtcttc agaagacaca gggttccttc atcaggcaaa
      661 atgtccatgc agctttaagt catatgtcac tcagagagtg cagattttga acactaaagg
      721 tgtgttcctt ttcctttttg gggtgctcac tatcagtgag ggtgctgtgt gagtctccag
      781 agacctagta agccaattgt gacacttcta agagcctcta ctgactagct aggggtgcag
      841 aacattcgta tttacaagaa cttgatatac cagtgacagt ccagggcaat cagttaattt
      901 ctactctttt gacttcgctg gcttgcttac ataaaaccca ttacacaagt agggggagtc
      961 cacctagaat cattttggcg actgaccttt tgacc
//
LOCUS       KCKM01000439             565 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6968apa ultra-conserved element locus
            uce-5830, sequence.
ACCESSION   KCKM01000439
VERSION     KCKM01000439.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 565)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 565)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..565
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6968apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>565
                     /note="ultra-conserved element locus uce-5830"
BASE COUNT          154 a          115 c          134 g          162 t
ORIGIN      
        1 tttagttagg acacctaatt aggatttcta atcaggagtc atcaagaccc ataattagca
       61 gggttgttca gactcattgc tttctcttta atggccatag gacatccaaa tggttttaaa
      121 ttatgtacca tgggctccta atcagtttat tgaacatcat aaattgttaa aaggagttaa
      181 tagcttgtgt ttcttgatag aaagtgctaa tactcgaggc agagaactca tcaaatgaac
      241 ctcattagag aggggaggag ggagattgtg tctcagtgtc tcattttgtt ttagtaatta
      301 gcttttactg gattatccga tccaaatctt tattcagttt actctgtcaa atctagtttg
      361 cattttaaat ggaaaattga cacggggaac aatttgtctc ctgactgggt taacgggtct
      421 ggctgcaagg aggcacctgc agagagaggg gggtgtcacg aaagcccggt ggcagggacc
      481 agccccgggg acttccccag cagtcgatgt ccaccagcca tcaccccttt tgccccggca
      541 gccgaagagc agccacgtgt gaaat
//
LOCUS       KCKM01000440             776 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6983apa ultra-conserved element locus
            uce-744, sequence.
ACCESSION   KCKM01000440
VERSION     KCKM01000440.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 776)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 776)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..776
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6983apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>776
                     /note="ultra-conserved element locus uce-744"
BASE COUNT          232 a          142 c          151 g          251 t
ORIGIN      
        1 agaataaatt atttgcttca aatatgcgtt tgaacactct catccttctt ttccgaatgt
       61 tcagctcatt tgtgaattct ctggaagtaa agtttttgtt caaacttttg gagtccttgt
      121 gatctggcta gaaattagag cacatcaagc ctcgtacgta atcagaaaat gccgtgtgaa
      181 aacgaggact gctgggagca gcatctttgt taaattccag ctagagcgaa ctccttcctt
      241 gctgcttgag cactgaactc cctggtctta tgactatgtg tgcagtctga actgatttct
      301 gagcccagct aagggaaaga gttaagcccg ttctcccttt ctagttggca gaaagtttgc
      361 agtttaaaat tacatactga ctctggtgta gagacacaag aaattataga gcagacactg
      421 tccaggacaa cgtataattt aaaatgtact aaagaatgta taccacatgg caaagtaagt
      481 gaagtgcttc ttcaaatata agtgttttgc atagaaaggc tgtaattatc cactcctagg
      541 gaaatgtttg cattcattct aaatcaatat ttactattca tctcttgtgt tcaacaaaac
      601 agggatttaa catttttttg ttttaatgag gtactaagac tacaatacta caatgtaatt
      661 gtcttgatac aaactattgc taaattgtgt tgctattttg ggagcgagca gttttttaaa
      721 agggggtatc cctatttgtg cagtgttact gcagtaacac acgactcaaa ctcagc
//
LOCUS       KCKM01000441             345 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 6999apa ultra-conserved element locus
            uce-2172, sequence.
ACCESSION   KCKM01000441
VERSION     KCKM01000441.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 345)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 345)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6999apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>345
                     /note="ultra-conserved element locus uce-2172"
BASE COUNT          105 a           65 c           82 g           93 t
ORIGIN      
        1 ggcttttctg cggaacaaca agagccaaaa ggccccgtgt cagccggtta tgtaagacac
       61 aatctcgcct gaaaacgcac aatgaatcgg gaaggattta tgtaattaat tgaccagtct
      121 taacctgtta tcgtgatgta aggaatttgg aactcattaa tttgggccct gacagatttc
      181 atattagagc tggcaaatat ggattgagcc tcttattctt gtagcagctg gaatttccat
      241 gacagtgagg attagtgaag aagacctatt gctcgagtca aactgcctct tttgtaatca
      301 gcagccctgc tctgcattaa aggggtaatg ggaaggagaa aaaaa
//
LOCUS       KCKM01000442             755 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7015apa ultra-conserved element locus
            uce-2978, sequence.
ACCESSION   KCKM01000442
VERSION     KCKM01000442.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 755)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 755)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..755
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7015apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>755
                     /note="ultra-conserved element locus uce-2978"
BASE COUNT          248 a          144 c          138 g          225 t
ORIGIN      
        1 agagatctgg gaaaatataa tttctcaaaa ataaatactc catacttttt agcattctgt
       61 ttccctcttg taaatagcac agtaatttgc caatatctcc actgttttac aagaaaacct
      121 tttgttttta tcagtcagtg atgtgatgat ggaaatggtt ttgtaagagc actctgaggt
      181 ggaaggtgtt tgggtttttt ccctcttgct atagggtttc actggataac ttggtttaaa
      241 aagacaagaa tcaaaagcaa agcaaaacaa aaactttcct gggactgaaa tactttgtat
      301 gtgttgttat ttgcagtgca tgccaagaca ttcacgggca ccagagccaa cctggcgagc
      361 taattaaata tataaatgta tgtgtttaaa acagccttat aaggagcatt ggaaatctgc
      421 aagatgagcg aatatcttat aacttcttcc gcaggtgcga ggatagctac aagccatgga
      481 ctttctgtcc tgcttcttgt ttgtggcttt gtgaagggtg ctttgcttta atctaaaagt
      541 gctgactttt tccaatatca ctttctcttc ttaaagcaaa gagcaaatcg cctgtaaaat
      601 ccacggagcg gacagcaaag ttgaccctaa cctccaacca ccactctgca cccaatgtac
      661 tctaaatctc tacacaagga gcaccttctt caggaagtac aaacaaaaat actaaattaa
      721 ataaataaat aaataaataa aaagaagagg atacc
//
LOCUS       KCKM01000443             484 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7029apa ultra-conserved element locus
            uce-6391, sequence.
ACCESSION   KCKM01000443
VERSION     KCKM01000443.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 484)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 484)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7029apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>484
                     /note="ultra-conserved element locus uce-6391"
BASE COUNT          152 a           82 c           88 g          162 t
ORIGIN      
        1 ttggcaagga gatctgctgt agtaacacat aggcacaaca tcacatcaac taacttccag
       61 gggtatttct ctcgttattt attgcagtac cttgtatttc tattactagg caattcgatc
      121 cctcaaacaa tcgcaatctg aatgtcctta aagtgaactg atgtactgta cttaatagcc
      181 tggtgacttc ttggattaga ctgatagagc cggtgatgaa tagggtaagt atagttaaca
      241 gccattctta aacaactttg agtgtcatta attttgttat aggacagatt aatctgaaat
      301 gtcaggactt gctgtactag acctaaaatt gtattttcaa accaatttta atagattgta
      361 tttcactctt gacacaaaat tcatttactt gccttagatt gcagctttta ttgtaattgt
      421 atcaaattaa atcagggcgt tagaaccata gaaaactagg ttgaagttat aggatgagaa
      481 tcgc
//
LOCUS       KCKM01000444             865 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7044apa ultra-conserved element locus
            uce-4742, sequence.
ACCESSION   KCKM01000444
VERSION     KCKM01000444.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 865)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 865)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..865
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7044apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>865
                     /note="ultra-conserved element locus uce-4742"
BASE COUNT          279 a          135 c          168 g          283 t
ORIGIN      
        1 tgccttcttt gaagaacgta aattgaaaat gaagtgaggt cattttcatt agaagttgcc
       61 tgactggaaa ggagtacaag ttatgttcaa cagttcaaaa actgcttgag gaaacattaa
      121 cttttaaagt cctgtttgaa taatcactaa acctttagtc agaaatgaat ccattcttcc
      181 atgtagaaac actgaggaaa acatttatat gaaaaaatat tgtccaattt ctgaatatac
      241 agaccaatta gtgaggttta atttagatat ttgttactga gtatgcacca catatacatt
      301 ggagctgatt taccattttt tccttgtctt atttgcaaaa agagactcct acttattgaa
      361 atattactga agaatctagc tttccccaca aattacacac tttttgcata aatgtgccta
      421 attacctgaa ttcagttttg attagcagtg ttaattgatg cagctgtgga tgggctctgt
      481 ttacctaaat taccatgtgc aaacagcaat acgtctgaaa gtgaatatgc taaactgaaa
      541 atactaatta gctaagacag attgttattc aagtcacatc tcagagcttt ttaatgaaag
      601 cctgagtgtg tcagggcttt atgatattca gacagaaatg tctatattac atatgatttc
      661 taaatttaat tcatgggaac agatgggttg tcggccgggg ttcttctcca tcgcttgcag
      721 tattaacgtg aatattttac tttactggag acatttttga gtgtgtatat ctgagagaga
      781 aagaagtgtg tgtgagagag agacaggagg gaggaactca ttgtgtgcat tgacaatgtg
      841 ccagccaaga atatctaact ggtct
//
LOCUS       KCKM01000445             344 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7059apa ultra-conserved element locus
            uce-5664, sequence.
ACCESSION   KCKM01000445
VERSION     KCKM01000445.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 344)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 344)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7059apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>344
                     /note="ultra-conserved element locus uce-5664"
BASE COUNT          111 a           63 c           58 g          112 t
ORIGIN      
        1 ctacttctat gtgtattatc cattaagaaa gtgcaagaga ggaaactttg aatttggaga
       61 acaaacagta atgagtccaa cattttacat cttcaaagag caaagcaggt ctgtgagcaa
      121 ttaaagttct gggacattaa tatcttctga ccctgcggaa aagggcaatc aaattccaat
      181 cacgtctaaa aaacatctgg acaaatttga gcaaatgatt tttcaaccct ccatatattt
      241 ctttaaatta cactgtcatc ggaggcaagc cacgtcccag agcatgaaat aaatgagaac
      301 tgtttgggct gttatttttt tctttcttat tctttctttt tttt
//
LOCUS       KCKM01000446            1010 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7075apa ultra-conserved element locus
            uce-77, sequence.
ACCESSION   KCKM01000446
VERSION     KCKM01000446.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1010)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1010)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1010
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7075apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1010
                     /note="ultra-conserved element locus uce-77"
BASE COUNT          364 a          215 c          168 g          263 t
ORIGIN      
        1 acagggggga agagtaagaa tgctgcatgt catcaatcgt tactcatttc tgagccaaat
       61 taagtatctg taatgcaatc tatgtattag taggtactta cactacagtt taaaataaac
      121 ttaacatgca aaaatgttat aacaccttgc aacaccaatg atcgacaatt agatttaaaa
      181 ttcattacta tcaaggttct tgcagaactt acctgctaat attccgaatt cattaataat
      241 tttgataatg agtaacagtc tatttgtcta ctctacatat atttagaaca tatcacagtc
      301 tactttcaca ttaaaacaga atctaaacca ccagtgtgta ctatcactag cttttttcca
      361 cagcaaacta cttattacaa agaaaaaagg tgcaaaatta cctctggatg agcctagcct
      421 ggaaagtgat gagcgccgaa aggatggata accaaagtaa ctaatatctt ctgaaaacat
      481 agcatcagca tcaataatga cacttgggtg agcagaatgt atgtcagcat ccagaagaga
      541 cataagatcc tctataagag gagacaaggg tcttaagtga ataatcagct acttaaaaca
      601 tcagctagag agaccatcaa ctaaacaaat atcgaaacaa gaaaaatcct atctattagt
      661 tgaatttctg ctcttcagat tcaccagtgc aaactcatgt gcctcctatg caaccacatt
      721 tacagtcaag cttggtggac tagtgaacaa aactagttcc cctacaagaa ccgctctgtc
      781 acttatctaa ccacattgcc caaaccacat tgttctgtaa cccagaaact cagacttcac
      841 cctgtcactt gaaagaacaa agcactcgtt gggtaagatg gatacataca catacatgtg
      901 ctcacacact catgcacgta acgcagaact ccaaagatga cctaaaatta agggagggca
      961 gaactgacgg tgagagctgg ccttcatgaa gccacatctt ggatgacaaa
//
LOCUS       KCKM01000447             358 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7106apa ultra-conserved element locus
            uce-4033, sequence.
ACCESSION   KCKM01000447
VERSION     KCKM01000447.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 358)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 358)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7106apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>358
                     /note="ultra-conserved element locus uce-4033"
BASE COUNT          119 a           67 c           83 g           89 t
ORIGIN      
        1 aagctgcaaa tggtagaaat taaaacaaac taaaaacaga gtccaggcac aatcaccttg
       61 tgtctgggaa cgacaagggc tttcctatca aaggaaactg aaggtcacac ttttcctcat
      121 tgatcttgca atgtttgtta attactctgt cactgatgtg gcgaaggata attaaacagc
      181 tctgtttata tcttatatgc ataattatgt gcgctgccac tgaactcgtg aagactagag
      241 aatgtgcctc tccagaaggg gaacggacag acggagatga gtttcggctg cattattaac
      301 aggaggagga aaacacgcgc tcacacaaaa ggaggaaagt ttgatggatt cacaaagt
//
LOCUS       KCKM01000448             828 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7122apa ultra-conserved element locus
            uce-3144, sequence.
ACCESSION   KCKM01000448
VERSION     KCKM01000448.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 828)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 828)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..828
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7122apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>828
                     /note="ultra-conserved element locus uce-3144"
BASE COUNT          251 a          185 c          216 g          176 t
ORIGIN      
        1 taagagagga gtgatgcatt ctagcaaggt ctgctaagac tcaatgacag tctcgtccta
       61 ttccctgcca ggagaaatac tctagctgag aaagaaagaa ctaatagaga taaacgactg
      121 acatcacaca cagcctgctc agttgtcttt tgaatgtgaa acatgaacac aagcattgca
      181 ctgtcagctg gttgagctag agctggagcc tgactctgcc ctgcccgaac ggcgagctct
      241 gcctgagcaa agcaaggtgg acgcagccct ccaagtagcc cagccactca acattagaga
      301 agcccttgga ttccaaacac tgagctgtgc cgaatttgaa tgctccagtg atgactgaat
      361 tggttaggaa tacaactgaa cagcaggctg aatacgcggc gaggtattgt gggtaattag
      421 agattaatta caatcccata gtttgtatca tggttcaggg tcagcacggg gtcagtgcac
      481 atggcaaact tagagagctg tgactagatg gatgacgcca gctcggagtg gctcagcaaa
      541 gtgaagcgta tagaaatgag gagccagcga ggctggagag tggactcgca gccagggcgc
      601 tggcgacagc actgacacgg agttgtgggg ccttgaggca ctgagaaaat gttaacaagc
      661 ggcagagaga atacagctgc actaactatc caactgcaac cctgactttt ccaattaacc
      721 ttttccaagc tttctaagat ttcggaaatc tggggcactg tcctgttgtc aaagaaagct
      781 cataaagaaa gaaaaagggt gaggaaaact gcctcctccc taaaaaaa
//
LOCUS       KCKM01000449             528 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7136apa ultra-conserved element locus
            uce-4164, sequence.
ACCESSION   KCKM01000449
VERSION     KCKM01000449.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 528)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 528)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7136apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>528
                     /note="ultra-conserved element locus uce-4164"
BASE COUNT          184 a           93 c           93 g          158 t
ORIGIN      
        1 caggctactg atgattagct aggctttttc agcagaagtg ccttctaatt cgtggaatct
       61 actgaaaccc tctctcttta tttcagttac aaggttcatt ttcagattgg aaaaatgtag
      121 cattaaaaaa agaggcactg acaatattag tttaaaaacc tcttattatc tggaagtaca
      181 tggaaaacgg ctcagctgaa cttgcatttt gttttagatg cttaatgatt acaaagaaga
      241 taatttatga ctgacatact tcttgtgcca agagaagagt tgaaagaacc tccagttacc
      301 tccattagac tgatagagaa gtctaaaaga gcattacact ctgcagtgcc atctgtcaaa
      361 atacgtaagt gaaataatag tagcaagctg tcacctattg cttagtgata agagttttag
      421 acaaaccaaa aacttacatg ccagaaatcc attttgttat gcgatccttt tgggaaagta
      481 gtgaactcca ataagaaaaa aaaaaatcct aagtctcctt aatttgca
//
LOCUS       KCKM01000450             579 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7152apa ultra-conserved element locus
            uce-3057, sequence.
ACCESSION   KCKM01000450
VERSION     KCKM01000450.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 579)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 579)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7152apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>579
                     /note="ultra-conserved element locus uce-3057"
BASE COUNT          213 a           93 c           78 g          195 t
ORIGIN      
        1 aaaaaggaaa aataataata aaaaaaagcc cacacttgtg ttactctgca ttttctctaa
       61 gcctaaaaat tggtagagtg tatgacaggt ccacctcatt tttcttaatg atgtttttat
      121 tattctttca ctcaattaaa acagaaatgg atattgcatc ttctgactgt ataattgtta
      181 ttgtaatctg ttttcgatca ctgcttggga aatgggtcca aaacaacata aactatccac
      241 agcctcagaa tacaagtcat ttgcttttac tacaatactt aaagagacat ctatcatgtt
      301 cctctgcgag catgtttgta ttatggcaaa aaagttattt gtaagttggg aaaagacatt
      361 atgaaaatca ccttttactc caaagtattg tataactcat aatttataac tacatttctt
      421 aataaccatt caaaataata aggctggaaa ttgtgcacat ctaattttaa tatataaata
      481 atgggaacgc atataaacca aaatatgctc aaaatatgaa ttcatattga aaaatagtct
      541 ggttatagtt ctgaaaatga cacgcttcat ttccaatat
//
LOCUS       KCKM01000451            1036 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7167apa ultra-conserved element locus
            uce-3259, sequence.
ACCESSION   KCKM01000451
VERSION     KCKM01000451.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1036)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1036)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1036
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7167apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1036
                     /note="ultra-conserved element locus uce-3259"
BASE COUNT          306 a          238 c          219 g          273 t
ORIGIN      
        1 ctgcctgtga tgtggaagtt ttccccatta ccaggcacct gcaaaagccc tccacctgtt
       61 tttactcgaa gtgacagacc cagaggatga catgcatgtt ccccactggt ctgctgggag
      121 cgtgatgagg ctgatgcaat ccctggctcc agcacacctg caaggtctca ttgatctgca
      181 gctcagtgct ctgaaaactc agaaatctat tatcagtgtg agtgcgtgct tattgatcag
      241 attacctgct tctgttccct gcacggacct aattctaccc gtgtgcataa atatgcgcac
      301 acgtattcat atatacaggc gcgtgcacac gggttatcgt gtgtatgtta aaggctttac
      361 atattttttt tgttttacaa aatcccacat aaataaaaag aacggacctt ctccatgaaa
      421 cgtgagcaca gaaacactca caagtggcca agagctgcta aataattaat caatagagca
      481 gtgtggcagt ttgaaatgta aatgtgatgg atgaaggtgt gatgcttgtc atcaagcaga
      541 aaatgatgtg actggaatgg ataacccaca gtacctgctg actggcaaaa gcttggacac
      601 aaaaataaag taaagccatc agaaagcagc cctggcaacc cctaattctt gcctttgacc
      661 cacaattcac tttcatgtcc ctgtcccaga agagatgttt aaaaaaatga tgaagagaga
      721 tcttggggcg ggaaagggga gagaaaaaaa accatctgaa gaaatgctac ctgacaaggc
      781 tgcgggctac attcttgaga acacctttct tttctttatg ttctccttct cctgttaaat
      841 aaaaatgcag ctcctttttt ccctttcctt tcttccaaaa ctctcctgag ccgttcctgc
      901 aagtggttct ctgactcgag agctgacaac agccacatgc aaaggaacaa agaacgagag
      961 tgacaattca gagtgcacgc aggtgagaaa gacacctttt acttatcaaa ctaggctgca
     1021 agaaatgctc ttttta
//
LOCUS       KCKM01000452             399 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7183apa ultra-conserved element locus
            uce-4364, sequence.
ACCESSION   KCKM01000452
VERSION     KCKM01000452.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 399)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 399)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7183apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>399
                     /note="ultra-conserved element locus uce-4364"
BASE COUNT          119 a           80 c           95 g          105 t
ORIGIN      
        1 tagggcaggg gaggggggag agcacggtgc tggaaggctg aaggtgggaa aagcaagggg
       61 cagagtgcca gccaagctgc agtattcagt tacacgtgaa atgatttgta attctgagta
      121 atcacttagg acaagccctt gcaccatttt atctatacat gactctaggc caaagtcaat
      181 actcatagta aaataatgag atgaagctaa ctgagtcctc ttattaatgc tccaaggagc
      241 aaatctgatg cttgagcttc tcccatggaa agtatctgct tcttcctaaa aatgaacaag
      301 tgggtcatga tgcccagtgt aaccagggtt cttgcttcca aaaacaagga aaaatttcct
      361 ttcttatttg tgcactatat catgctttgc ccagctgca
//
LOCUS       KCKM01000453            1097 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7198apa ultra-conserved element locus
            uce-1463, sequence.
ACCESSION   KCKM01000453
VERSION     KCKM01000453.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1097)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1097)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1097
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7198apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1097
                     /note="ultra-conserved element locus uce-1463"
BASE COUNT          283 a          194 c          215 g          405 t
ORIGIN      
        1 agggctctca atctccccaa ctgtgagaga atgattttgc ctcttgtatt taagtcaatg
       61 caaaatgtga aatctttgtt agtgtgggta gttgtggtgg gatattctga atttctgctg
      121 gagatacaaa tgctgtaaca gcatgctgct actgttattg tgtggcagtt tctttaggag
      181 gagctgctta cttttgtaat aacattgaca acatttttat agttgttttg tatttctaag
      241 agtcatttgt tgattcctcg tttagctggt tcgttctgca aggtaaaata gagctatgtt
      301 ttatatttca agggtatgct cttttgttca ttcctgtcct gcctttacat ctccctttta
      361 tttgtttttt tctttttttc ttttcatttt catctcattt ttcatcatga tgtagttaat
      421 tctttttttc agctcatgct acactttgtc ttgtctattg ctatgtgaca gaaaagccag
      481 agacattcca tgtctggcag tacacctcca gggacatctt ttgaactctc ataatttgta
      541 tttattgcca cccactttgt aagttcacag tttaatttgc cagcagtggc agtgttaggc
      601 cgacacagta aaacaagata acgttaaaat gtcagaacga gagggggcat gaatgatgca
      661 ttacccactg ctagaacttg cacttgtcat gcctttccac caaagtgatg ttaactacct
      721 tttgagagcc ttatctgact ggtattactc agaaatagga tcattagttc actgctctga
      781 ttagaaggtt gctatggttg attaactctt ctggaactgg gatcacggtg ggaacataac
      841 atgaatcaca ctggattata cacctagaac taattttata attatttctt gcatttattt
      901 atagttgttt acacatgtat ttctttaatt cgctcctggg ctgacagagc tgagggcggg
      961 aaaaaattga gcgtatttta atggaaacat tcaaggtaga tttcagtcga gctgtttctc
     1021 cttcagcaca gtgtgttaac ggtgacctat tatgcaaatt actataaaat caggaaaaac
     1081 tgcaatttga tgtggtt
//
LOCUS       KCKM01000454             853 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7214apa ultra-conserved element locus
            uce-82, sequence.
ACCESSION   KCKM01000454
VERSION     KCKM01000454.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 853)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 853)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..853
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7214apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>853
                     /note="ultra-conserved element locus uce-82"
BASE COUNT          236 a          155 c          150 g          312 t
ORIGIN      
        1 tatttctata tcgggggcag agctgcttgc acagggaaat aaaatagttt tctctgcact
       61 tttttcttgg gagtatgcaa aaatcccatg tgcatttttt tatgaattgg acccttctgt
      121 tttatagctg gtagtagtca tgcttattac aatgccatat tatggcctta gacacttttt
      181 atgtccctat aacatagcac cctagagaaa gatgcttcac taagcaagaa ctagtaaact
      241 tgctacagaa tcagcagaat acttttcaca aaagtgcata aacttttgtt cttaaacatt
      301 gtcatccttc accttaacaa gcacagagaa aggttccact ggtttctatg ccttgttagg
      361 tctatcatct ttttaattaa tagtgttttt acgaagccgt ctgaactgtg tcatttccat
      421 tatcagaaaa ccattgccat taatgaataa ttttcatttc tgatccttga tatcatgcta
      481 gttgatctcc tgtttccatg ccgccaaatg atagcatcgt tttctgccca cgatcaaatt
      541 taatttggac tctgattata ttatgctgtt gcgactgaag tgtcaatttt tgtcaggcaa
      601 ttaggagcta taacctgtga agttaagttt gataggcatt gtaattggat tgttacagta
      661 atagcttgga acattccctt tttttcttgc tgctttgatt cttgatgcat actttagttg
      721 tgagaacaaa ggcattttgt tattatgcaa ccataggatg ttcaagacaa caagatggag
      781 ttcaggtttt tccacttccc ctagatgaac ttaatttgga tttagtattg tccacaaatt
      841 atgtcaggat ttt
//
LOCUS       KCKM01000455             891 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7230apa ultra-conserved element locus
            uce-6459, sequence.
ACCESSION   KCKM01000455
VERSION     KCKM01000455.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 891)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 891)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..891
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7230apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>891
                     /note="ultra-conserved element locus uce-6459"
BASE COUNT          295 a          163 c          158 g          275 t
ORIGIN      
        1 aagtttagcc tgtagagttt atcaaggcaa acaatgatct tggacatgga ttagtactac
       61 agccagaaga tccgaacata ctttaccgcc ccagggaagg ctggctggca tacaggtcag
      121 cactcaagtc tgggcattca tttgttacag tacttaaagg gggaaaaaac cccacttgta
      181 acaatgacat cttcaaaatt cttcttacag tttatttctg taatatacaa atatcatgtt
      241 cgtggtttgt tgtcagtcaa attaagagca cattatttaa tgcatgtcct ctagacagtg
      301 aaaataagtg aaaacatctt gatttgcttc ttttagtgta tgtcaattgt gtgcataata
      361 tttgaaggtt aatagtgtga cagtgatgta ccaaaccatg caaacaatat ctttgtaaca
      421 atggacaatt tccctgtgaa atggattgga aagaatgtga tagcatacag aagactatat
      481 taaaatgatg gcccttcaat ctgatgaaca gtggaaatgt tacttgctca gaggcaccat
      541 taaaattaga aacatctatc tgtacattgt cttgataact gctctacgcc tctgcacgcg
      601 tgctcacgtg tatattactt tgtttgcaaa cttgactata gcttacttgt aggatctgct
      661 cagataaaaa cccataataa gaaaaattga attcttgcat caggaatgtt gcagttgttc
      721 aagcacagct cataaacaaa aaagcctatg ccaaataagt ttccctgtaa gactgtcatt
      781 cttaataaaa atgctattag caaattaaac ttcttacagt taaatgacaa aacattgctg
      841 caagatagtc ttaattgaga tcccaacctc tgcacagttt ttctgtactt a
//
LOCUS       KCKM01000456             449 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7245apa ultra-conserved element locus
            uce-4643, sequence.
ACCESSION   KCKM01000456
VERSION     KCKM01000456.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 449)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 449)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7245apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>449
                     /note="ultra-conserved element locus uce-4643"
BASE COUNT          159 a           66 c           76 g          148 t
ORIGIN      
        1 taaattaagc actcttctct aggccccttt aaatggaagg aactgaaaac acaataatga
       61 tataattaat tgcagtctta ttcttgtaga aaaattacac ctttttcgat tagtgtgaaa
      121 tataagtgtc aaatcagtaa taaaatcctg atcaataaaa caataataac tatgttgtta
      181 aaagcggacc tagaaaggtg cttatggcaa cgtattttag gggttagaaa cccttttaaa
      241 ataaacggat ttcatcttta cactatgtca tctaaatcat tacaatgttt gtgtatacaa
      301 ttatcatcag aggataaatt gcagctattg gatggattaa gtttgaactt tctgacctca
      361 taaatctgag tttgtcatag ctttagcaaa tgcttgtgta acaatcagtt gattacatgg
      421 cagagcagat gtacgtatgt taactggaa
//
LOCUS       KCKM01000457             782 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7261apa ultra-conserved element locus
            uce-1055, sequence.
ACCESSION   KCKM01000457
VERSION     KCKM01000457.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 782)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 782)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..782
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7261apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>782
                     /note="ultra-conserved element locus uce-1055"
BASE COUNT          256 a          130 c          139 g          257 t
ORIGIN      
        1 aaaaactaaa atattgctca gattgactgc tatcaaagta tgatagtttt tttcctacca
       61 ttgtctgaca tcacttgcct acaacaccag ctatctatga aactgaagac ccttattgag
      121 gaggttaatg tgaggtagga actccattca gtgttatttt ggcttaaggg tgtaatgtca
      181 caatttggtg catcctctaa tgactttttt ttcttttttt cctaaaagca gcttatagct
      241 tagacctagt tcagcgaatt tccttgcaag gtccttggaa aatggggagg ggtggggaat
      301 acaattgatt gtgtggccaa attttttgtt catgcctgct tactgatttt tgttcatctc
      361 acaaataaac aaggcatgaa tacatcaact cacaaaccat aaacaataaa gaacttcatc
      421 ctgtaagttt gctacggcca gcagtttgtg gttgaatctg ctatttgtca taagataaat
      481 gataaagtga ttgccatttg tcactgaata cacaagagga gtgttcagct gtgaatcaca
      541 gaaacgcaga caacagtaaa tattgctgtt cttattagta acttctacaa agacctgctt
      601 aatgataaaa aactgttttc ttaactatgg gtaccaattt aatatgataa caattttctg
      661 agagtataaa tgtaagcata aaacgtaaga gtatttacag tataaaatct aaaatttact
      721 acaattcatt gtgcatctca gtaaaagaca cttctacata ggaagatatt ttgtaaagtt
      781 gg
//
LOCUS       KCKM01000458             964 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7277apa ultra-conserved element locus
            uce-5065, sequence.
ACCESSION   KCKM01000458
VERSION     KCKM01000458.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 964)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 964)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..964
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7277apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>964
                     /note="ultra-conserved element locus uce-5065"
BASE COUNT          250 a          270 c          202 g          242 t
ORIGIN      
        1 agcacccact tctcccaccc ttagacaccc cgggaggggt aagtcttcca caccaatcaa
       61 ggcctttcac aatgcaggtc ttggtgagaa attgctgttt cacacacaca cacaacatca
      121 acccaccaca gggtgacagg gctggctcgt gatacgctgc acgagatctc gctgcgagcc
      181 gttagcctgc ctgctcccac ccctcggatg gccacgtgcg tgcacgaaac cacaagcagc
      241 agccttgtaa ataatggcca atcaagggaa aaaaaaaaaa aaatgtatat atatctcatc
      301 tcctttaatt cccttgcaat gcaatgattc tgcaagggtg ggtcggtcgt agctgcaggt
      361 gctcccggac tggggaggag cacaaaaatg aagttgtttg tggcttttga ttccatccct
      421 ggaattattt acagctgcag gcaatattaa actatgtaga gcaagtgtcc tcatttacat
      481 gctaattcat ttataccctc tggattgatt tctccaattc attttcagcc cactaactct
      541 tctgatatga attatattat cacctccaga acggcagcag ggaaatgtga cgaagccacc
      601 ccagctcttc tgatctctaa ttgccctcgc tgttcagagc tggcgtggcc agctgcagct
      661 tcgcctcctg gctaccagca tccagcttcc ttccatctcc tggagaaaaa ccagcagtgt
      721 ggcttgaaga gtgaatcatc ccacctccat cgctccatcc tcttctgggg aagacccaag
      781 agagtggacc ttgggcttgc tgcctttgga aatcattcct tttttctgcc caggaggagg
      841 aaccacctca cttcagagag caaaaccaaa gtccatctgt gagccgtaag gaaattggat
      901 taatccttga cttcccaaag gcctttcaaa gcttctcagc ttttcacagc agcctcatac
      961 cata
//
LOCUS       KCKM01000459             437 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7293apa ultra-conserved element locus
            uce-3152, sequence.
ACCESSION   KCKM01000459
VERSION     KCKM01000459.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 437)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 437)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..437
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7293apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>437
                     /note="ultra-conserved element locus uce-3152"
BASE COUNT          124 a           96 c           89 g          128 t
ORIGIN      
        1 accaacacat ctctcccttc ccgtgacagc gagcagggag gtcatgttct ggcaaccatt
       61 ttctgcctgg tccctgcagc aatccctaca gggttaaaca cttttccgct ccccgaattc
      121 ctagccctgt cactgtatca aggttatcta ttattggcag tgacaggtga aaattaatct
      181 cctaattatt tcttgctgtg taatctgcac tgaagaagta acataaaagg attagagtac
      241 accctctacg gaaggctttg ctagagagcc aatcatccag ggagatagaa ggtatgtggc
      301 aaagagagat ttatgatgga tttccaacca ttttgaaggc agactatact ataaccaacc
      361 tacagctttg gagtaaggat ctacttgcag gtatcttaat accgtaaatg ctttttattg
      421 ttgattattc tatggaa
//
LOCUS       KCKM01000460            1004 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7309apa ultra-conserved element locus
            uce-1150, sequence.
ACCESSION   KCKM01000460
VERSION     KCKM01000460.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1004)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1004)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1004
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7309apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1004
                     /note="ultra-conserved element locus uce-1150"
BASE COUNT          317 a          178 c          239 g          270 t
ORIGIN      
        1 tgtgcaactg cgctgcgaag atttgtagag tgaacacggg aaagaaatcg ggagagaatg
       61 aatgacaaag aatgagagaa agggatatat aaagcgtgga ggtggctttt ctttaataat
      121 gcatatgtag caatagggga ctttggatag aattctctcg gctctcttaa acccaatcta
      181 aggttaattt ataataaata attatagttt tagcaggaaa atgagacctt gtgaagctgg
      241 gagggaaggc agcaatacag ttttgaaagc tgaacgtgct catagtttct attgcaagtg
      301 taatagctac agctattgta gatcagacat cgacaccgaa agaagcataa attcatataa
      361 ttaattttgc cattgtaaaa atcatttgct gaaatttgca ttattaacat tatcaagtcg
      421 ctggttggtg agacatcaga catgacgagt gagaagggca gcttagggag aattgggctt
      481 taaaccctca gcagatcgga gttaggatca aaggcgcttg ttttatgtgg ctgtgtgaca
      541 ctttgaagtc ttgactgcac ctacagcact catttcatca ggttcactgg tgtcttaata
      601 gcagatcaat aagtttcaaa gtcggagagt taatttgata ctagtgctga tgtggtcgtg
      661 ctggggaagc agagagaggc aggcagagaa agcaagccta ttaaccatcc tgatagggag
      721 aggtgtgtac aaatccaaac tgtaaatatt gacctcaaat ttgaaagctc cgcacactaa
      781 aggcatcgag gtgtttacgt tattggaggg gattgtatgc aagagaggtt gctgtgctgg
      841 cacccttctc cagcccagca atgccaagtt gtacgaaagt tccccccgta acgagaataa
      901 atgtgtactc ctaaacccct aaagcatgat atcctttggt gatgtttcct gcatcaagct
      961 gcctacctct gtccccaccc caaataaaaa taaagacata tata
//
LOCUS       KCKM01000461             938 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7325apa ultra-conserved element locus
            uce-664, sequence.
ACCESSION   KCKM01000461
VERSION     KCKM01000461.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 938)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 938)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..938
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7325apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>938
                     /note="ultra-conserved element locus uce-664"
BASE COUNT          295 a          180 c          161 g          302 t
ORIGIN      
        1 aagaaggaac tctgtctctt aaatcattca gacagaactt acacaaatgg gcaattttag
       61 cacgttataa gggtccatct tcaggcaact gctttgtccg ttgtgttgtg gtgtctcaga
      121 gccatattgg aatgcctggg tgtggcatgg atcatgatta tcacagaata ggagagaaaa
      181 ttaatgaaga gttacatggc atttaaaaat gagtttgctc taatctttct taacctttgc
      241 tctttctgta agaagtgttc tcagaggaac attccccaat tcaagagcaa aaaacagtgt
      301 aacagttctc atttttcagt aaaatcagag ttattacgat tcatttggag tttgatcctg
      361 tgatatttta tctcaacatt atatgacatc attaaagaca tcttatattg tttttgccta
      421 tggttagaaa ttatgtctgc ttaatcaatt ccattatgca ttcaaccatc catgacacat
      481 caaaggctaa taaggttttt ttaaaacttc gcttgcttaa aatgatttcc ctccagatca
      541 agatgcagag cagaaaatat taatcagttt aaataaatat caagactacc caaataatat
      601 gaataattgg cacagtgcag tgcctactgc ccagttccca acagctggtc acactggcac
      661 atggcaccat ctcaacagtc tttgagataa tgactttggc atctgccgat gagcgtttgc
      721 tactgcccac agaatttaca actcacaagt gggaaacaga ggctccaaca gaactttttt
      781 atgcaaggtc tttgaaattt attaatgtaa tgcaaacaca agccttccaa cccattaaat
      841 tgttgatgtt atgcgaatcc accctggaat tgcagatcct cattaacatt atttgcatgt
      901 taatctgcat ctttttaatt agtgatatta tttatgca
//
LOCUS       KCKM01000462             985 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7339apa ultra-conserved element locus
            uce-5635, sequence.
ACCESSION   KCKM01000462
VERSION     KCKM01000462.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 985)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 985)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..985
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7339apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>985
                     /note="ultra-conserved element locus uce-5635"
BASE COUNT          334 a          202 c          164 g          285 t
ORIGIN      
        1 gaaaagtagg tccctcttgg tgcaaaatag tcaatgtgaa gttcagtaca tcagagtata
       61 ctgataaacc atctaaatgc atttgccatg taagatactt gtctgttgta agccatccaa
      121 aatatcctca tggctaggat ccccgtaaat acaaacgttc tgatgaagca aaatgattta
      181 gagttattat taaaaaaatg gagtaagcaa aaagatacat acgaaacgta atactaatcc
      241 tatcccaaaa gattgtgcta tccaaaggga tctagaatat taattaggaa gttgttgcaa
      301 acctataaaa aatcatccca taattactct gaaaaaagtt gcaatttcaa agctacactg
      361 caaaatagca tactggatta attatgccag actgcagcaa taaccttgaa ttaaagctgc
      421 aaccttctat ttttaagaaa caattgcctt tctggttgat gaaacctgtc gtcccatcag
      481 gtaacagacg tgaccaggaa agagaaaagc gataatgagt caatccaagc tgtttgatac
      541 atttcaaatc ttcctcccac agagtgtagc tgccacaagc tacatcacca gtctggttcc
      601 tgaaaactcg atctcctccc tgatgggtga atgtgtccca gacattaggg ccctttccat
      661 ctgcattcca gccttctgct tgaaaaacaa aacttggtcg ttacactttt gacatcagaa
      721 gacatatggt gagtgtaaat attcatcata aaggaggcac aaaatcctca aaatcttatg
      781 agtgaaatga gcagaattcc ctccctgctc cgtatatcat tcaaagtaac taggaacttt
      841 caagcattag tatgtatttg catcaagttt tgcatttatt catatttttc cttgctgcta
      901 attacttgaa actcatgctt taaagagcat tcagagttct gacactcttc atactttctt
      961 agccaaaaat cagatgctag caact
//
LOCUS       KCKM01000463             941 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7355apa ultra-conserved element locus
            uce-3308, sequence.
ACCESSION   KCKM01000463
VERSION     KCKM01000463.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 941)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 941)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..941
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7355apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>941
                     /note="ultra-conserved element locus uce-3308"
BASE COUNT          285 a          224 c          175 g          257 t
ORIGIN      
        1 ggcgggaata aaaagacagg aatcatcgtg cagactttac taattctagg tagatgatac
       61 ggctctcatt acagcagcac tccattcctc gcaccctgaa attctcttta tcatatttta
      121 taaaaagtag ggattgtgtc catgggagaa aagccatgaa aagcttaaaa tccaatttta
      181 actttctatc ctgatactat agtgtttcca tagaaacatc aggaagacca cttaagagca
      241 gctttttttt tgtagccatg tttggcacca tacccctccc ctggacaacc tattatttca
      301 caaatggatg cttttcgcag cttgttctgt gcaggctccg atgaaggggg gaaagaaaaa
      361 gaatactgga tctttaacca gttcccttgt ggccccctcc cttttttgtt ggtaatattt
      421 ctgtcattct gccagggtat acggtacaaa gggttacact ttaattgagc tgtcagcatc
      481 tccaacaatc ctataaaact ccgattatgc acggcagggt tagtgacaca cttgttattg
      541 tggatgccct atttgctaaa cccaagcccc cccctcacag gtcacataac ccacgcgacc
      601 ttcctgtcat tagccgcgtc tattcctacc tcactgctgt gaaaatcaca caagcgaagg
      661 cttcaaagcc cttgccagga ctgaattcga ccaggagcta atcacccaca aatccagctc
      721 aaatggcaat aattggctaa actgctcacc tctccagagc tcagcagtaa tttgggataa
      781 taaagaaaag aattattcag ctaactgccc tgaaatgtat gctttgtgac cgacacactt
      841 cacattttaa taatgatgga cacaaaatcc aatttaatac agcatctact gaataacgaa
      901 accaagaaca ctggcaggaa aaaaaatggt atgtgtgtgt g
//
LOCUS       KCKM01000464             911 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7386apa ultra-conserved element locus
            uce-3451, sequence.
ACCESSION   KCKM01000464
VERSION     KCKM01000464.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 911)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 911)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..911
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7386apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>911
                     /note="ultra-conserved element locus uce-3451"
BASE COUNT          298 a          171 c          204 g          238 t
ORIGIN      
        1 ctttctcctc agtacacgca taaagaaata aaagatgcca gtttgtggct tagctgcatt
       61 caggaaaact tccgtattgc tgccaagaac tgccatctgc cacctacaag cgcaggtgcc
      121 agggagtctc ctctgcacac aaagcataat aatataacac aaaggaccaa tgtgcactaa
      181 taattgctaa acacacagaa agaggggcca gaacattttt atgaaagttt acttagtctg
      241 tggagatttg catacagatg gctaggtcag ggtgctgtgt atgccgcctg ggccactgtg
      301 gggtagggct gccttcaagc agcctttata agcacacacg gcttttacta tagcatagtg
      361 ttgtggagag acctcattct gcacacactg aatagtcatt caaatagctt gctttgaaat
      421 gagaaaagac cttggatggg gggaaaaaaa gcaaattctt ttctttgtga gacagaggag
      481 gagtgttggg aaagaggcca gaggacttaa agaatgtggg ttagcaacca ggaattagag
      541 gaaagtttct gtggagacac acaattagat atgtggcatt cacccctctc cttctagtgg
      601 gcaacaagag caagcacatt tcaaaaggtt catcatctgc atgaaacaag gataggggga
      661 agaaaaagca ccctaatttt taaagtataa agagaagtgt aactgtctta aaataaaaca
      721 aacccaaagg ttaagcagca agaaatttcc cttcagctaa aagcgtgaag acacaaaccc
      781 tgaatttagt gcatttcctt tgtgcatctg tgtatctgaa agcgtacata tgtgtgtgta
      841 catacacatg tgtgccttct gacatattta tatagtttaa atttgaaaac actgatttaa
      901 gattttgtaa t
//
LOCUS       KCKM01000465             610 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7402apa ultra-conserved element locus
            uce-4897, sequence.
ACCESSION   KCKM01000465
VERSION     KCKM01000465.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 610)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 610)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..610
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7402apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>610
                     /note="ultra-conserved element locus uce-4897"
BASE COUNT          217 a          130 c          118 g          145 t
ORIGIN      
        1 agaaaaaaac aaaacacttt aaaaaaaggg aagaggaaaa aacatccttc ggaaagcaaa
       61 gcagagctat atttgtaaat gttaacaaaa gctaaacatg gggttttgct atggtaagaa
      121 aatgccaccc tccccttctc cataaattgg gcttctagga agcaatccct cccccaagaa
      181 acggcttgtg gggagggcaa agcaaccagc tgggttgtag gagtaataaa gaaggagaat
      241 caatagggca tgcaatggag ccaaggtgct gccatttatc acgccgcttc tctgactcca
      301 atcattcatc atgctcaatg aggcagcaaa taggaaaatg actatttgta tcaaacacat
      361 ctgcactcat ccactgaggt attttattcc cattaactct gaaagtaaaa tacgcagagt
      421 tttctagctt ctttcagctc aggttggcag aagaaattca cagcacacag gaacacaaat
      481 gactgcatga gtttgcaaag cattttggaa aggattttag tgactccaca atacgattat
      541 acacacaggc acatataagt atacctgtat aatacacata caggcatgta caacacacac
      601 ctctcatttc
//
LOCUS       KCKM01000466            1039 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7418apa ultra-conserved element locus
            uce-6277, sequence.
ACCESSION   KCKM01000466
VERSION     KCKM01000466.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1039)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1039)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1039
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7418apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1039
                     /note="ultra-conserved element locus uce-6277"
BASE COUNT          351 a          186 c          173 g          329 t
ORIGIN      
        1 ttctcatgta taaactcagt tctgttatta caaaatcttg cctgtctttc ctgatgatgg
       61 ataacaaacg tataatttgc ctcagaggca gatcagaaat taaaaatgca ttaattcatg
      121 caaactgaga tctaagatac tgccattttg ttttgttcta ttattgagaa agtttaaaca
      181 agatgaaatt tggtacgaaa cataatcctg aaactcctag ggtccactac aatgcttgga
      241 caaaaatcag atacagttta tcccaagtat ggcatcagcc tctatcaaaa aattgtatgt
      301 tcagtcacaa atggttattg taaaatcttt attaacctaa gtgcatataa aaattgtgaa
      361 ttcttaatac aaagcagtat ttgactttta aatttcattt taagcttgcc ctgttcactt
      421 ggaatgtgat tacagagtaa attaaaaagt aatcacatgt gaattacatt tcctcatgaa
      481 tgtaatgact tcaggagact gattaatgtt aagcagtgcc tgtcctacct catgcatacc
      541 ttcccaggtg agatgtacaa gatagctgtc gtgagttgat ttaatttcct ttctctggta
      601 gtccagtgag aaatgctgaa cagaaaccaa ttcagtgcgt tcattagatc tgtatatgtt
      661 cgcttctttt gtccacccaa gcaccatctg caaaatgcta tcagtgtcag cttatgattt
      721 tgagcaagac ccaagagact gagctcatcc tgcacactgt attctagcca ggaaaactct
      781 ttacatttag atagaacaac tcagctggtg catagagcaa gagataccta tgtgtcagca
      841 tattaaaggc tgatgaaaaa gaatatcttg tcaataaact aggaaatagg cctgtctagg
      901 aaaatacaca catgcaaaca tatatacact tattttaaaa agctgtacat aactcagaac
      961 atgtctaaag tactttcggg gaaataattt ttattctttc gcatgcatta aataaactca
     1021 tggtattaca ggaataatt
//
LOCUS       KCKM01000467             397 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7433apa ultra-conserved element locus
            uce-2513, sequence.
ACCESSION   KCKM01000467
VERSION     KCKM01000467.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 397)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 397)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7433apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>397
                     /note="ultra-conserved element locus uce-2513"
BASE COUNT          108 a           79 c           74 g          136 t
ORIGIN      
        1 aaaagcttct ttgcctgagc tgttaagatt ttttctcaca gttctgcctg tggcgcctgt
       61 cactagcagt caaataagga caattttacc attctctcct gctgctctaa tttttttttc
      121 agtgccagta catgtatttg ttattcttta taactccctt tgaagttggg aatccaaggg
      181 gaatctaaaa ccgaccagat gtttctgctg ctggagacac agaagacagc aaggattaag
      241 tttaactgaa acttagttct atacaaaacc cattacagtg agaattcttc ctcagatagt
      301 tttatttatt atttatattt gcacttgcca tcctgggtag gtgatacctc tagtcatctt
      361 gcccgggagg aaaatggatg gtttatccaa gtaaata
//
LOCUS       KCKM01000468             426 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7448apa ultra-conserved element locus
            uce-3606, sequence.
ACCESSION   KCKM01000468
VERSION     KCKM01000468.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 426)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 426)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7448apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>426
                     /note="ultra-conserved element locus uce-3606"
BASE COUNT          159 a           55 c           68 g          144 t
ORIGIN      
        1 catattcttc atataatcag gaatgatcag gaaatgtaga actaaatata gagaaaaggg
       61 aaagttagtg aatatatttg catatgcaaa ttagcttaat tgatactgct tgcctctaca
      121 gggatttttc attacaaact ggagtgctac attgttcagc tcatattgag taatttagta
      181 actaatgaga ccagtttgca ctaatttgca tatgataaat gagcttaatt gcagtaaata
      241 acttggaggc ataattactt aattttcctg tgttgcatgg cttttaagtt cacgtatgaa
      301 caactcaaga taattttgca tatttaaatt agttgctttt aaaattcttg aacaaaaaag
      361 aacacacctt acaatttgaa ctgtaaaaca attaaaagta gaagatacag tattttgaat
      421 aaaatt
//
LOCUS       KCKM01000469            1280 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7463apa ultra-conserved element locus
            uce-6953, sequence.
ACCESSION   KCKM01000469
VERSION     KCKM01000469.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1280)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1280)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1280
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7463apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1280
                     /note="ultra-conserved element locus uce-6953"
BASE COUNT          253 a          357 c          347 g          323 t
ORIGIN      
        1 ggatgaaggt aaatatgtgc atgcataagg tggtctcttt ggaggagact tgtcctgata
       61 taaagcactg gacctgtgct caggagggct tcccacatga tgtgcctgtc ttgcgagctc
      121 aagcagcaat agtcaggctg gctttaaacc agccagctta atactggtct aggtccaaac
      181 ctaactgagc acctccacac tcgtcagcag catgggcagc tctagagtcc gtaaacggca
      241 gtaccgcgct cacggcgggc accctgtgca ggtggtggag ctgccttagc ttttcagcat
      301 cccgctccta ttcctgtgag ttctctggcc tcgccacaaa gccacccaag ggcggtcatt
      361 gactcctgga ggtctccctt ttggactagg caggtccttg ggctgagcaa aaccagagac
      421 tgtggcaggt caggtgccag caggaaagtg gggagggagc cgacgtggca ctgctagaat
      481 acgtccccac gggagcacca ggttgcccca cgcctctcga ttgtccctcc acgaggacca
      541 cgaagggtgg ctcaggagct gctgcctctc acgtgccgct ctctgccttt ctcactctgt
      601 gtctcttcct gttccatctc ttctccttgt ttttccagaa aagaaagtcc agttccagcg
      661 ttcagttaat ggtgagtgtc cttcgtcttc ctcaatgccg atattgctgg gcttctccac
      721 atgatccagc ttcccctgtt tttggaaatt gcctcggggt agggaagaag ggacaccggg
      781 gttggaggga acatcctcaa agctgtatca cccacaaacc cctttcacag ggttggtgca
      841 ggcacttgct ggccaccagc tgatgggaag ccagccctgg ttcttgctga tgggttctca
      901 tgccgtttct cccagttctc ctgactcagg tctgcaggct gcatcggtcc aaggagcctt
      961 ggagaaacac cttccatgcc tctgcgggga ctgtatggtc atgggacacc ttgccaacct
     1021 acatcggggt attatgggta atacataagc aaggctctgc tgggaagagc tagcagagcc
     1081 attgctctag ctccgctagc agagtcgcct tgatggggct cctgcagaga cacggggggt
     1141 cagtaccctc ctctccccaa aatctgtgta gtgctcagcc gtttttttga aagagctgtg
     1201 tctcagcctt tggtggtcca tgtgggtctt ggaagcactc tgttttattg tacatttctc
     1261 tccctactct gcggtcagtg
//
LOCUS       KCKM01000470             683 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7479apa ultra-conserved element locus
            uce-4823, sequence.
ACCESSION   KCKM01000470
VERSION     KCKM01000470.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 683)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 683)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..683
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7479apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>683
                     /note="ultra-conserved element locus uce-4823"
BASE COUNT          209 a          106 c          137 g          231 t
ORIGIN      
        1 tgtttgtttt gaggggcaat ccgttgcctt tcctagcaaa cacactagca ctgtatgtaa
       61 attggatttc caaacttctg cttacctttg ttaaaccaaa gggaggaggg cagatcaagg
      121 catcttgctg tacagatgct agtttattaa gctataatgc cagaagttgt tggagcaaag
      181 ttatgttcgc ttctgtgagt ttatctgatg tcatatagtt cagaaaaaca ctggtgttaa
      241 tattcattgt atggcttaat ttgtttgata cagcctagca acaccagtgt agcgagatgc
      301 ttgttatgta ggtcttcgtg ttgtttcaaa gtctttatta ttatgacagc aaagtcttgt
      361 tcattaaagt ttcacaatcc attttcatta ggatgaaact gattctgtaa atgaacagtt
      421 gctctgaaaa atcaaaccct tgcagctatc acaggggagg tacaaagtct gtattaatta
      481 tcaggaatat ggtgtcgatc gaagatgtta attgccctga tggttagtta tttggggaat
      541 tgccatgcat ttcatgcagg gataataaaa atgaattttt aaacaaagag atcttaaaat
      601 aatatataat ctgtagagaa taccaacatc aaagccttat ctcaaagctt tgaattttat
      661 ctttgtggtc caaaatgtta aag
//
LOCUS       KCKM01000471             818 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7495apa ultra-conserved element locus
            uce-4524, sequence.
ACCESSION   KCKM01000471
VERSION     KCKM01000471.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 818)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 818)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..818
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7495apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>818
                     /note="ultra-conserved element locus uce-4524"
BASE COUNT          193 a          164 c          233 g          228 t
ORIGIN      
        1 ggtgactacg actttgcaga aattgaaagg aggaggaaaa aaggagtgct ccagcttgta
       61 taagaaatga acctttgccc aatcactttt tgtctgtgaa taaggtaact ttgtgcgtgt
      121 gaaatttgaa agcaataagg tatgtgggtc ccttctctat atcggttctc aagagtcgat
      181 cgtgagtttt ttcttttgga gcaggcctga agttctgaga taaagcagct caggaaaaat
      241 aaatgctctc aagcagatgc ctttaagaga cagaaatcat gaatttcttg aattgcaacc
      301 actctggggg tggctacaat gactttttga cagtgacagt aactctgcct tgtcttttcg
      361 agcccttctt tggcccattc agtctggaaa gctgcttaag cgcacttaag cgcattagca
      421 tttggatgct cggggaccgt attgaccctc atttggaaag tttaaatgag tgaaagatgg
      481 agcgatttgt tagggcttta gaaaccagct ttagagagcg gcgggttttc cgctttggtt
      541 tgttcgggtg cttgttctaa tctggtgcgc tgtttaaagg cgaccagact gatttgtgac
      601 acatgagccc aaagcgctat ttttttgggc ttgacccgat taactaatct gtgctcggaa
      661 tttcaatcac gggtgtcgga gggagcgcgc gttgggaatg gctcgccggc gggttgcccc
      721 gacggtgtcc ctgcgctcgc agatggcaaa agggcgacga gggatcctgt ggggcgcggg
      781 gatgccagag agccgtccac ggggctgtgc tctggtca
//
LOCUS       KCKM01000472             414 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7509apa ultra-conserved element locus
            uce-528, sequence.
ACCESSION   KCKM01000472
VERSION     KCKM01000472.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 414)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 414)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7509apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>414
                     /note="ultra-conserved element locus uce-528"
BASE COUNT          120 a           72 c           71 g          151 t
ORIGIN      
        1 actgcctaat ataaatcata tatatggtaa taatttttcc tcttttgtag tctgcacaag
       61 atccatgaaa gattgtattt ttattactat ttaaacagtg attaaactta gcctgagcag
      121 tgagcaaggg ttcacatgca ttcttttata ctgctggatt ttgttgtgca tcatttaaaa
      181 cattttgtat gtttcttctt atctgtgtat acagtatgtt cttaaataat gttcaattgt
      241 caggagaact gtgagaaata aactatgtgg atccagtctg tttatatata gaatgcttgc
      301 tgtgacttcc tttctgtgta gttctgactt tttaatccag acggaaaaca ttaaaaggac
      361 gttttcacac gcctcacaaa tactcactat gcagacctgc aggatgccca gcgc
//
LOCUS       KCKM01000473             882 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7525apa ultra-conserved element locus
            uce-1200, sequence.
ACCESSION   KCKM01000473
VERSION     KCKM01000473.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 882)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 882)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..882
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7525apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>882
                     /note="ultra-conserved element locus uce-1200"
BASE COUNT          252 a          181 c          175 g          274 t
ORIGIN      
        1 tatttgtggg cagagggtgt ggtgaagctt tagtgtgcat ttgttttatt ctcctttaaa
       61 aattaaaatc tcctctcgta gttttatcaa aggccttcct cactagggga tatccatgta
      121 aattatatct caagaggaag aataactgaa tgaaatgctt aaatgcaggg tggatattcc
      181 acgctttcgt gaaactcttt ttttttttgt actgtctgaa catggcagga tcttaaacac
      241 tgacaatcca aattttttaa agagttttag acaaggcagg caataccttg cccaacaatt
      301 ttgatgcctt tcttctgtat caggttaaaa gtgtttttac tgtatccctc tagatgtagt
      361 tctgaagaaa catttctcct gccaaaatac acacacagtc tgggattaaa agggctgaaa
      421 cctaccacca agttcttaac gccctcccac catcattaga ctaaatccgc cgtcattcca
      481 gattcatttt tcccttattc atctgtccaa ctaattcctg ctgcattcac taggcttaca
      541 tcttaatctt ttctgttaca tagagaatac ataatgaaaa gctgcatttt ctgggtacat
      601 gcacacattt ggagcggatg aaccatatgt gaagtgacat acaatactga atggaggctg
      661 aatggtgtcc agtgctaaaa acagtgcaag tccaggaaca aaaagcagga gaacaagagc
      721 cctgtgctgg gcttgcctcg cttgaacacc aggggattcg ccgctaaaac atgggtataa
      781 tttcactgtt ttcactcaca caagctgtgg gaaaggagtc accatctgat gtttgattgt
      841 gctggatatg tttttggcag tggccttgta gtccacattg aa
//
LOCUS       KCKM01000474             696 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7541apa ultra-conserved element locus
            uce-3082, sequence.
ACCESSION   KCKM01000474
VERSION     KCKM01000474.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 696)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 696)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..696
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7541apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>696
                     /note="ultra-conserved element locus uce-3082"
BASE COUNT          217 a          150 c          150 g          179 t
ORIGIN      
        1 tttctgttta tttattcgtt ggctgcaaga ccaattcttc atgcccaaag ccactgttcg
       61 ctgcacagtg gcacgacgac gtggggtgtt ttccagtaaa ttgtgtttta atgtctgtcg
      121 caagcagtgg aaacaccaga gtgagcacat cagtgccagg tgcacaccta aaaagaatca
      181 aaagaaaaga gctttttgcg acagaataaa tctatttttc ttgaaagcgc ccacggtcac
      241 atgaccgagc ccggagccct taggacagcg caaaacccgc ctgcaaaggg aaagaaatgg
      301 agcagctctg cctccgcctc gcacacgggt tttagcctgt cgacgcgttg cctgtccgta
      361 tccctcacag cgcatctgta gagccattaa attggataat ccctctggcc tttgatacat
      421 ttctggacat gattatttca ttactcgcag tatatcagta ggatcataat aaaaaggact
      481 tctgacaacc tgccaagagt tttgtggcct tgtaaacaca aaagtgctct aataaaattt
      541 tattaagtgt taaaaagtca taaaaagtga aataacataa actacaaaat ttactgtcct
      601 cagcaaatgc tgaaaatatc gtccatagta aaattaaatt agcatgtaat agacagcgcg
      661 gcagcgtgga gtgggtttaa aagaggaggc aggaaa
//
LOCUS       KCKM01000475             632 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7557apa ultra-conserved element locus
            uce-2637, sequence.
ACCESSION   KCKM01000475
VERSION     KCKM01000475.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 632)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 632)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..632
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7557apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>632
                     /note="ultra-conserved element locus uce-2637"
BASE COUNT          220 a           96 c          103 g          213 t
ORIGIN      
        1 agaagcatgt agctactgtt ttccccacat tggaaagttt gtgattacta tagcatatac
       61 aattttttat gcagaggatt agctttaaca atctaaatgc acctaagaat gaggaagtgc
      121 tcaggaagcc aattgatttt tgaatagcat tgagtgggtc agcatgaaaa ctcgcttatt
      181 cactttagca cgcgcttcac agtatatgta ttgtactata ctgaaaaatt tataactaca
      241 atttaaaaga ataagaagga aaagcaactg caaagatagt gtacaactat gttatgcata
      301 gaacattgct ttttctaagg ggaagcatat gagcatctca gtttatacaa aaagcaggac
      361 gtaactacat agttgtcagt gcatcctggt gaaggcatta aaccctcagc ttctttttta
      421 aaaatttaat tataagctag atgctaatca gaaaatattc tgtatttttt tccttaaatt
      481 tcttcaatac acagtaaaga ctttttctat ttccccaaat agtgatttaa gcatcataca
      541 aagttaaatt tcaatagcat acaggtattt atggtttttg tatgaaaaat gtaaggaaat
      601 ttgttcaaaa cctattatta tactcggttt tt
//
LOCUS       KCKM01000476             773 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7573apa ultra-conserved element locus
            uce-81, sequence.
ACCESSION   KCKM01000476
VERSION     KCKM01000476.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 773)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 773)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..773
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7573apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>773
                     /note="ultra-conserved element locus uce-81"
BASE COUNT          216 a          201 c          205 g          151 t
ORIGIN      
        1 gctgcctttg cccagcccct cagggcttgg aagcctggcg cagcccccag gaggtgactg
       61 cagctgggtg cagccctgca gagatggtcc cgcttccttg tgccgggcag gccgggcgct
      121 gtgccgtggc cgcgccaact cctcgctgct ctttgcaaag ccacagcgag agacaataag
      181 gcagggccac ggctccgagt cgcactccac ggaaaggatc ctacctccgc acaaggctgt
      241 ccaagaactt gacaggactc tgttggaaaa agatgttgaa agaaatgatc tctttaagtg
      301 caatgggaga tatttgtctc tgatttaccc ttggcttttt gctctggttc aggtaggagc
      361 ggcgtgggat ggctggcaga tctgagagca tggcacgccc cagcgggcaa agcgagcagt
      421 gcggaggaag gcgcgagtca gtttggagtg ctccccattt atcaaactca cgcagcccgc
      481 cagcggagcg agtctttcta tcattacagc tctcaaaatc cgattcatac cactaatcct
      541 gccttcattc tcccagatta ataacatctc tttcaacctt cacagtgtga taaatagaca
      601 aagagagaac aaaaggagaa acagaagtga gagaaagagc cagagcaact ccacataata
      661 aagagaacca agaaagggga aaggaaaaaa aaagggaaaa gaaaagggaa agaaaggagc
      721 cagcacactt gactctgcca tttactttag cagattctcc ccaagagctc cct
//
LOCUS       KCKM01000477            1003 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7589apa ultra-conserved element locus
            uce-1190, sequence.
ACCESSION   KCKM01000477
VERSION     KCKM01000477.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1003)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1003)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1003
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7589apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1003
                     /note="ultra-conserved element locus uce-1190"
BASE COUNT          348 a          192 c          171 g          292 t
ORIGIN      
        1 tttagctact gtaacagggg tatatgggca agtatgaaag tactcatgta aaagtccata
       61 gccaacaaat tttcagtcca tactcttttt cttgtgacaa tgccttatac aaatgaaaat
      121 tctatgctca ttaaaaaaaa taaaacaaaa caaacagaaa ataaaagcat aaaacaaatt
      181 aagaaacaaa attaaagaca ttagcttgca aacttaggta atttagaatt ctagaaacaa
      241 tccaatggct actttaatta acacatcctc tctgcaatca gctgaaggcg tacacaaata
      301 tatactttta cacggcttaa cacggccaac ataaaataga taatataatc tgaaagataa
      361 atagagttta ataccttagt aatttgtatt tagaaacaaa ggccttggtg cagtcttgtt
      421 gtgtgcactt gtagggcctc tctcctgtgt gagagtatga gtgaaccttt aatttctcaa
      481 cactgttaaa ggccttgtca cacagttggc aaggaaagtt ttttcttggt ttggtttcac
      541 cacgcttacg tttccctgaa gggactttct gggtatctct tacttctgac aaatcaccag
      601 gaatgacagt ggccatcgca gcctaaacca ggccttcttg ttggacactt gggaactgcc
      661 caactccact aaatgattta gctttagatg gcttctcaag tttcatgtgg tcgtaaaaga
      721 aagcaaaagg ggactggaaa aaaaaaataa gaaacaacta gtttgtaact aaacttagat
      781 tttgaagttt acttgctatg tgatgcttct gaataaaact taaaaataaa attaggttca
      841 gctggtctaa tgtaatacct gcaggtttct ttacactatt tgctgcaact cttaaaacac
      901 attgctcagg atgaacagat ccacatatgc cctgaaatca cacctcacaa ccttcccctc
      961 aagcactgat ggagaacagc aaaatttctg tcagattact gga
//
LOCUS       KCKM01000478             679 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7604apa ultra-conserved element locus
            uce-1288, sequence.
ACCESSION   KCKM01000478
VERSION     KCKM01000478.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 679)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 679)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..679
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7604apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>679
                     /note="ultra-conserved element locus uce-1288"
BASE COUNT          197 a          126 c          125 g          231 t
ORIGIN      
        1 ctcttgtttg tttgtgccag cttcaaagtg agttgcagga ggatctaggt agctaaaatc
       61 actcagtcag ctaaggtttt gttcagcatt caccatgagc ttttttttta atactcgtgg
      121 ctttaaacca ggaaatagta gcaagcctta aggatacaaa cacacaaaag atggtatcat
      181 tctgctagtg catctttctt aacttctgat ttatctttta aaacgtttct ttttattagc
      241 atccatatcc ttcagaggag cagaagaaac agttagccca agacacagga cttacaattc
      301 tacaagtaaa caactggtaa gtgaccctac aatcaatatc tttactccca tggctaaact
      361 gcaatttcta aataattgtt ttctttttca tttctgaaca aaatgcaatt gacaaggaaa
      421 attcctgtgt tcgctctttt taggtatgaa agtagtactt agggaatggt aaggctaacc
      481 taggcaaatt gtttttcaag atcattctct ttccgcttgc aaagcgtcca actgagcctt
      541 ggattctgtt caggtctttc ccattgaaaa cacctgaaaa gccacatagt tttgcacagt
      601 cttagtattt aggttatcag tgcagtaatg gttggctttg tttaggtttt gagtggtgat
      661 ttagatacag gcattttaa
//
LOCUS       KCKM01000479             518 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7619apa ultra-conserved element locus
            uce-7823, sequence.
ACCESSION   KCKM01000479
VERSION     KCKM01000479.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 518)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 518)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7619apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>518
                     /note="ultra-conserved element locus uce-7823"
BASE COUNT          192 a           84 c           94 g          148 t
ORIGIN      
        1 aaatatttta gccagaaaga aacattaaga aggcctacag actaggaaca caattgaaaa
       61 acctctaaga aaggaaatat cttattaatt cattaagtca aactgcttgt atctacactt
      121 gtatgactag aattatggtt cattaacttc atttctttat atgagttaat tagctcagag
      181 gaggccagaa attaattacc agcttatata gtttgtgcag aatggcattc tgtttattta
      241 gtttctccta ttaactttta atctcttcaa acaataaaag aggtaattag tattttataa
      301 acaaaaatga atgcaacaaa ggcaaataat ttgccaaata gtgaggctcc tgtgtggaac
      361 ctgatagttg cgtggttcaa gttacagacc ttgtcactgt taagtataag caaaaggaga
      421 ttgcaaaggt aggtagtcct aaggcaggga caggcaatcc atcacgaaag aagagctacc
      481 tgctaatacc tcacagagca gaaaaacgag ccttaaaa
//
LOCUS       KCKM01000480            1070 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7634apa ultra-conserved element locus
            uce-6568, sequence.
ACCESSION   KCKM01000480
VERSION     KCKM01000480.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1070)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1070)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1070
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7634apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1070
                     /note="ultra-conserved element locus uce-6568"
BASE COUNT          341 a          173 c          208 g          348 t
ORIGIN      
        1 taaaaataaa cctatggaaa ataagtaaag catgataaag agtacattgg ctacaccttt
       61 ctgtgcactg ttttaagttg ttatttcatt taattttatt tataaacatt tactaaccat
      121 aggtatttaa gtgaaggttg ttttttagtt ttgttttggt ggggtttttt tagtgaaaca
      181 gtcttattta ctcttgtgta accagggaag ctggagtaga agtgcagcca caacctgaat
      241 aaagtgatgg tgatgcactg ctatagtgaa aagaatttac acaatttaat atgctcaact
      301 acttgggaaa attttgatca ggttagtttt cattattgct aagatcagac cactgagcct
      361 atagcaaaat taaacaattg ggtgaagtct tttgatgaca atagcgtgcc ctttttacca
      421 agaaactgtg gaaatgctct gtgcgtcttc ccagcaccca gagtcatcca cccccatctt
      481 ataattcaac ctgcaaacag attaagcagc tgagtttgtg gaaagtgtgt ttactttgag
      541 ctaagaaccc ttgtgtgaca ctatagagat tcctctgaca cctctgggag agctacacag
      601 acagttcgta ctcatcagca gggaaaccgg gctgagaatt cccaatttct ttgtaacctc
      661 aaccgcttca tacaaatcag tgtttggcaa ttaggcagga actcatttgt tagcttagct
      721 ttttattttg aagatatagg atgttctatg tttcagaagg gaactgacaa tttataaacc
      781 tgtcaacaga aaaagcttct tggcattaat tacggtagta ttaattagta gcagcatctt
      841 aaaaggatgc ttattgtgat ttaaaatgtg gcgtaatgat tcgtagccta aatagggttc
      901 taaaacatag gttttcttga cttcttttaa atgctcaagt aaatttgaat tctgacatac
      961 aagggatgta tgttcagcag ctatataaag tggtttcttg gcattattca ataaaatatc
     1021 tgaataacgt agcaacagct aaaaatcagg agagaaaaat aattatgagc
//
LOCUS       KCKM01000481             961 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7650apa ultra-conserved element locus
            uce-6209, sequence.
ACCESSION   KCKM01000481
VERSION     KCKM01000481.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 961)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 961)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..961
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7650apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>961
                     /note="ultra-conserved element locus uce-6209"
BASE COUNT          273 a          219 c          195 g          274 t
ORIGIN      
        1 cagagctggc aaaatctcct tctgaaatca cagtatttct ttcatgagat tcaaaatatg
       61 gggaagtaaa gctcagtcaa actttttctc ccctcttggt aagttaaata caaaatagag
      121 aaccttacac caagaacaag cagagccttc ttaacggagc tgacttcagt agctggtgcc
      181 ttgttttctt ccctttcctt agctgtcatt gcatctcgcc ccctgtaagc agcccagtct
      241 cattaaaagc aatgtggtga aactagccac atcattatac tcacttagac agagttcttg
      301 tagccagcac ttaccgttcg taataactgc cagttaggat ttgtgaaccc tctattggca
      361 ccttcctggt ggttcgttgg gtttatttct tactttgaaa tttacatgtc ttcagaacaa
      421 ctaaaattca caagaacaaa ctaattaatg gattccagtt ttgacagcta caagaagaca
      481 gatgagaaag taacatgctt ctggcagcgt gttatcaatt gggaggcacc agtgcatcgc
      541 ctctatgtgg tacagtgagc tggaaccgac actgacagat gacacagccc ttgacagtga
      601 agcctgtacg agctgacagc tccacttgca ctcaggcagg tccacgctcg gcgctggaac
      661 tgaaccaact tgatgtgcag aatatgcttg cttttatctt ccccccagct gtactgtggg
      721 caggcggaag agcactgtca ggtggatcct aggacctacc ttagaatgct acagctataa
      781 tgagtgctaa gatttcagca gtaaaaatga actaaaacaa ttcacgagta tcattagagt
      841 tagtattgta gtggtggacc tggcactgtt aggttaatgg ttggactcaa ctatcttaaa
      901 agccttttcc aacctaaaca attctacaat tctatgattc tattactatc ttccagctgg
      961 t
//
LOCUS       KCKM01000482             445 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7665apa ultra-conserved element locus
            uce-5948, sequence.
ACCESSION   KCKM01000482
VERSION     KCKM01000482.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 445)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 445)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7665apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>445
                     /note="ultra-conserved element locus uce-5948"
BASE COUNT          133 a           67 c          115 g          130 t
ORIGIN      
        1 tttttttgaa tttggacaga cttaaagaag tggcatcaaa tttgaagggc acccaatcaa
       61 tctgttgtcc tagctgcatg aaattgtatt tccctgccac ttcatatctt atttgcagca
      121 gctgggctgt aagtcattgg tgataacatt ctttattatg cagccgtgtt tatgaactgt
      181 gcctggaaag agatgataga aatatgcagc aatatgcaaa gggggggatg ctggggggag
      241 ggggaataaa tgctagttgc tagggcaacc gtggggctat tttgggcatc aaattttgca
      301 gatgatgaaa agcattttca tgtgatggtt ggtctctccg ggaagagaag gggagagagg
      361 gcacacaata aaccaggaag ataatattca agaaggcagt catttaattt tttcacagat
      421 aaatacatat atagtttcag ctgta
//
LOCUS       KCKM01000483             773 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7680apa ultra-conserved element locus
            uce-3902, sequence.
ACCESSION   KCKM01000483
VERSION     KCKM01000483.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 773)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 773)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..773
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7680apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>773
                     /note="ultra-conserved element locus uce-3902"
BASE COUNT          234 a          152 c          152 g          235 t
ORIGIN      
        1 tggattgcag ataaactctc tttgcatcat ttccagggga gagaaacaga acagaatatc
       61 cttcttttgg aaatcagctt ctttcttaca tgctgcgttc cgctgtcgca ataacattgc
      121 acgccatctc cttccattcc agatcttata tccaacaagc ttttgctgac tacgtaacct
      181 tcactaacct gaaattcctg agtagtccca ggagctcaat gcatcttgga ataaaatttt
      241 tgtaatgtca tttaagggta ttcctaatcc agaattattg aggaggcctg ggtcatggga
      301 attgagtttg acacttgaca aatacttggc tttgtgtaaa tggacaggcc actgaaataa
      361 ctgcctttgg atgtcacatg aagagaaatt aattctttat taacttccgc aatgataatc
      421 taataaactc atttggtcta ctagtttcag cacttaaagc gctcagtcaa ttggatgcaa
      481 atagattttt cctcccctct ggaatggtgt ctctgcggtg tgcaaaggga catcagggta
      541 aaaagccagg gctggcacgt cagaatgtgg catacgtgtt ccgatcctgc ccctgcatag
      601 tgtgagatag actggcacag cagaaagaca aatagcaggg actagaaaaa tactctatta
      661 agaaagaaga gggggtttta ttaaaaattc atattttaag caaattttct ttgacttgaa
      721 ctcagatccc ttttcttctt aatcaggtat tttaaaataa tatacaggaa ata
//
LOCUS       KCKM01000484             528 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7696apa ultra-conserved element locus
            uce-7292, sequence.
ACCESSION   KCKM01000484
VERSION     KCKM01000484.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 528)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 528)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7696apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>528
                     /note="ultra-conserved element locus uce-7292"
BASE COUNT          187 a          102 c           82 g          157 t
ORIGIN      
        1 ttcttaaaca aatttttgaa aaattaagat taaaaacttc tagacaaaga ataaactccc
       61 agagaaaaga tgcaaataaa attactatca taatcttttg ttttttattt gcaagtataa
      121 aaccgaagag aaacaaaagc acggaacaca gcatctgtca tatcagaata taaaaagatg
      181 atcctggcac aaaatgaaaa agctctaatt catttgcaaa tcaagcctgc cagttctatt
      241 tcaagctggt ggtaactgtc aagagttaac aagataatca ctttcaatcc tgccttcaat
      301 ggtacattac actgttattc cattcaataa ggccgttctt tgggacacta gatgaatggt
      361 tttcatttct aactcacaca aaaagttgca aaaaaaatcc atggggctta agaaagaaat
      421 ccctttacgg gcatttatct gccggcactt gcttttaggc aaaatgagat atttggatac
      481 atcggtgtcc attcacttcc tctattcctt caggccctca gtctgttg
//
LOCUS       KCKM01000485             764 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7712apa ultra-conserved element locus
            uce-1579, sequence.
ACCESSION   KCKM01000485
VERSION     KCKM01000485.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 764)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 764)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..764
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7712apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>764
                     /note="ultra-conserved element locus uce-1579"
BASE COUNT          193 a          129 c          155 g          287 t
ORIGIN      
        1 aaaaaagaaa ccctcgtggc tgtacttggc ttgtagcatt tttttctaag ttcatgccag
       61 cattaacaga tctgtcagaa caaagcaaat gtgtcatatt ggcagctgtt acttatgagt
      121 actttttctt tattgcattt tgttttgtaa taattgagaa gcttttatgt cgagctctgc
      181 ataaatggta ctgagtggga gggtatgggc atgctttcta ttattctgcc cctcatgcat
      241 gtctcctttt tcgtctttcc agaaccacac attgagccag cacgcacagt gagccactgg
      301 cgctacagga cacctctctg cagaagactt gacggtggca cagtggggag gaccatttga
      361 acattacatc caatcaaagt gtcatttgca acccagatgt aaaactctaa tgatttggcc
      421 atgaggcgct gctattataa gcagctggaa atgaatatta atggaagaga ttaaaagtat
      481 tccatgctca gtatttttta ttgtcctgct tcagctagtg tactttagag cttctgcttc
      541 tgactgaatt tatagtgtta gataaatctg ctttgatgct gttgcccttt gttgcttctt
      601 gtattatatt gatagttaaa gattaggtgt gattttttta ttttttgtta actgcttttt
      661 aattgcaatt ttaggtaact gtgctttgtg atgtgattgc ttggctattg tctgaatatt
      721 tctttttaat tttttaatta aagactaatg ctttgattgg attt
//
LOCUS       KCKM01000486             918 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7728apa ultra-conserved element locus
            uce-5190, sequence.
ACCESSION   KCKM01000486
VERSION     KCKM01000486.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 918)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 918)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..918
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7728apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>918
                     /note="ultra-conserved element locus uce-5190"
BASE COUNT          238 a          191 c          188 g          301 t
ORIGIN      
        1 gctaatgtgc ggaagctttc tccacttcta aaaggttttg ttttctttaa gctatgaatg
       61 cagaatgtct gtcagttttt ttgcgttagc tcggctggtt tatcttaagc atactcggta
      121 gacttgcctc agtttttctc aatctattgt tcttttttac accgcgtttg cacactgcag
      181 tgcatctagg gaatttcagc agtcggaata tacatgaaaa gagacccgct ctactttcat
      241 aaggtccctg gatgaattgg acgaaacctc aaggccccat ggtggagcca gagccacatt
      301 catattcctc gccatcacca cacatatgat agcatgaagc ccagaccaat cgaaaacttg
      361 acagtaagcc ttttgatttt gcggggaagc cttcatcaag ctgagagagg gaagggaatg
      421 tagcccaaac tggacttcat actgtggcaa gtttgaaatc ccagcccaac cacagagctg
      481 cttgattgga atagttggaa actgtgtcca ggaattcgtc agcaagaact tggctttcag
      541 caactcctgg ctttttaaag gaaaattcac catatgggtc atttaggagc cttatttatt
      601 ctgtcagaat tttaaatatg tacattcttg taaagtatag ctgccacaca tactgtatag
      661 tgtttgctgc tgtatgtttc taattcacag ccgctttgtt tcttagcctt atgatggaat
      721 gcccttggct aaagctgcca tgcttcgaca ttgcattcta ggctgcttaa ttattttgtc
      781 cttagtctac ttaagaaaca aaagaaacct ccttttacac tgcatgtgtt agcattagct
      841 tcttctttaa acatttaggt atgttttgaa actgatctct acttgtttgt gtgggaattg
      901 tggtggtttg tcaaaact
//
LOCUS       KCKM01000487             318 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7744apa ultra-conserved element locus
            uce-6592, sequence.
ACCESSION   KCKM01000487
VERSION     KCKM01000487.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 318)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 318)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7744apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>318
                     /note="ultra-conserved element locus uce-6592"
BASE COUNT          107 a           54 c           62 g           95 t
ORIGIN      
        1 tcttagaact ttcaagtttt ctactaagac ctgtctcatt gggtgtagag gggcatgagg
       61 gggaacataa aacatttagt aaacaaaaca taaagcatct ttaacatgaa taatcagaat
      121 ggttttaaat tgttttgttg caactataaa tcactataat cagtgcaatc actcagctct
      181 gacatccatt agccgcttgg ttacagcaaa ttaacaaaga agagagaaag tgattcatta
      241 tctcattcct gttaatgact atcagatgca ttgcttaatt agcggatggc cattgtagtg
      301 ggaagaaggt catacgcc
//
LOCUS       KCKM01000488            1045 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7758apa ultra-conserved element locus
            uce-5185, sequence.
ACCESSION   KCKM01000488
VERSION     KCKM01000488.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1045)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1045)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1045
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7758apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1045
                     /note="ultra-conserved element locus uce-5185"
BASE COUNT          340 a          214 c          175 g          316 t
ORIGIN      
        1 aatattcttt actgttgttg attctgctta ttcctaccca gtgctaaaca ccagcaaagc
       61 aattcaggtg ccagataacg atttctgata gccctgtacc catgttatct attgccccta
      121 cataaagtac ctgactactc agtttcttaa gaagtttttt aaaaatctac tcaaaagtat
      181 tagcaaaagc gcttggcttg agggtgtctt acatgaaatt ttacctactg ccttcagcac
      241 tattctatat gtttcctaaa aaaaaaaaaa aaaatatatt taccttttta tgtataattt
      301 tctcagaaaa cccaataaaa agatagtgaa gaagcaaagt tagctattag ataacagtcc
      361 ttgctgccaa aagccataat ctgacacaga ttgagcctgg tacagtagtc aattaatggc
      421 tcagtgctca tacaataatg acctactaac ctgacggtgt gttgctctca cattttgctg
      481 tcccctggga tgctactgtc actgtgttat ctattgcctg cttccctatc aaagaaaata
      541 agcagagctg aaatgtatgt acgcatcaag ctctgtagtt cattgcacac caaccccagc
      601 aactggagga acaatagatt tataagttta tcctacatta aaccaaacat gcctgactgc
      661 actgtaaatt actaaataat aaaccaggtg gtgtaagatc ctgacttgga cagaatataa
      721 aaatctatca acctgtaaaa tacaataacc ataaacgtgc tatgtagctg atggctcagg
      781 taaaccatcc acctccagca ccagagcttt ttctggagta aattgcaaca aaaggtttac
      841 taaatttagg tctggagcac tttttcattt tgcacaacac catcaatagg agaaatataa
      901 aaaccagtgg caaatgtgtt tgttttgttt acatttcttt gtctctaatg gagctatttc
      961 atggtaatgt gctgtgtttc ccagcatatt gccacgggca tttagtctga tctctaaaga
     1021 gaagatgaac tacagcataa gggca
//
LOCUS       KCKM01000489             551 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7774apa ultra-conserved element locus
            uce-7136, sequence.
ACCESSION   KCKM01000489
VERSION     KCKM01000489.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 551)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 551)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7774apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>551
                     /note="ultra-conserved element locus uce-7136"
BASE COUNT          164 a          122 c           72 g          193 t
ORIGIN      
        1 ccggcgcagg gctcaccgca tttgtcaccg tggctaatat cagagatacg ccgctttctt
       61 tttttctttt tctcttagca cacaaaagca agatatgtaa ttcaatgctc aatttaccct
      121 tgtctcgtag gatatttttc cccgctaatt gatagaaatt aagccattaa tcaagccact
      181 agccatcatt caaaccaggg aagatgaata caaactttca tcataaccac cttccccatt
      241 ttagtgttca ttagcattaa tttttaatgc aattatgcta ttcttttacg ctgagctcat
      301 aaattactgc tcttttgttg ctcgctggcc ttgtaaaatc caaggtaatg ctttgtgctc
      361 tgatcttaaa ggcaattact accttcttct atcttttata tatctctatc caaaataacc
      421 tctatatggt atgtacaaac taacgagtgt atatattaca tatacgtata atatataacc
      481 atttgtccat gttaaaccta tacacgtatc tattacacac attcagacaa atgaaagtat
      541 ttctgcatct a
//
LOCUS       KCKM01000490             757 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7790apa ultra-conserved element locus
            uce-4688, sequence.
ACCESSION   KCKM01000490
VERSION     KCKM01000490.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 757)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 757)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..757
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7790apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>757
                     /note="ultra-conserved element locus uce-4688"
BASE COUNT          244 a          124 c          122 g          267 t
ORIGIN      
        1 ttaacaatta gtagaatctg tcaaatagtc acacggaaat tactaactaa ttgaactact
       61 ggtcttttat tgttccagga agcagcacag ggtgttattc ttttatttca taggttcatt
      121 attatcacat atcgcgtttt ttgagaaata tatgcttcct agtagactaa tacataaata
      181 accctccctg taatgtcaca gtgtgcaaaa gagtttgaag taaaaccacc tgttttaatt
      241 agtattcagg ttcgtgcagt ttgataatcc tccttttaaa gctttgaatt tccatctgta
      301 tcttaagtta tgatgtttca aggttgttgt gagttaatta tgttaacttc ggaaacattg
      361 cttgcattta gaatgaaaaa cttcagcttg aatagccagg aaagcagatg ctatctttct
      421 tgtcaactgc tttgttatgc gttgccttga aactttttat aagattctat atccaaaagg
      481 aagtataaat ctccatgtat ttgaaatgtt actctaatct aatcaatatt ttaatacatt
      541 tcttttggga gggacctgag catgactcaa ggaaccaaag gcatgaaaat ctcttatttt
      601 atgttgaaaa cctcctgtta ttacaagtcc gttcatagaa ctaatttgaa gaacaggaaa
      661 acaccctgca ctataaagtt taaaaatcac ttctctcctg aaatatattt gagctttggt
      721 gaattaacag gaatcagaaa tattacaatt tgaatgc
//
LOCUS       KCKM01000491             803 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7806apa ultra-conserved element locus
            uce-7518, sequence.
ACCESSION   KCKM01000491
VERSION     KCKM01000491.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 803)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 803)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..803
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7806apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>803
                     /note="ultra-conserved element locus uce-7518"
BASE COUNT          304 a          128 c          127 g          244 t
ORIGIN      
        1 agcacacaaa tactggaaaa ggtcgtaacc cgaaatgcac ttgaaaatgg aatgcagcta
       61 attagtcact gtagtttagt aatttcacat ttaacctagt tagcacctta gtgaactcaa
      121 ccactggatg tgagaaatat agtgcatgta gtgtgacaac cattccataa tgcaattgta
      181 gtttttttga acattatgtg caatattttt gaaaatttgt aatattttag aagacttcta
      241 aaaggtgtaa ataaacaatg gctacagctg aagtcaaaag aaatactttc tactttttgt
      301 aagttgagat ttttaaaagc aatcatttgt aaggattgca tcaacatcag ttagcagagg
      361 aagatcaaac tttattgaaa ctgcttgcat acaaaatata ttgcactata accaaacaaa
      421 tgtcaacata aaatccaatc tgttgtagct aatatgtaca gagaatattg cccaagagca
      481 gttacattac aaggtcagtc taccttggtt aattatctac agtattttaa accaaacagc
      541 ttacagatga tgtgtgcaag gtaccaattt ctgttttcaa atactataca ttcccaaaat
      601 aaataactag aaatcaacat taatgtttgg caatactttt taagacattt ttatacttgt
      661 taaaccatgt gcagttcgtt gccattttta gtatgctcac ctgtatgcaa ggaaaaaaaa
      721 aagaatgaaa aaagctaaga aacaaaagtc acaaaataca tcagaggcaa ggtcaagttt
      781 gtacaactct gtacataaac agt
//
LOCUS       KCKM01000492            1084 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7822apa ultra-conserved element locus
            uce-5914, sequence.
ACCESSION   KCKM01000492
VERSION     KCKM01000492.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1084)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1084)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1084
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7822apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1084
                     /note="ultra-conserved element locus uce-5914"
BASE COUNT          365 a          227 c          182 g          310 t
ORIGIN      
        1 ctaaaaggca tttgcaagca caaaatttgt aagttagaaa ggtaaaaaat tttttagtta
       61 gtcgctagaa cgaaggaatg aaggtatgtg atcctgccct aagacaaacg ggctctgttc
      121 cacgccttct ggcaaagcaa aaaccccact ggaaatcaaa caggcttcag aagaacttga
      181 ctgtactgtt ctgtatttca gcatgaactg tatctttaaa acaatgacag tttctctcat
      241 ctcttcaatc ttgaagcact ttgtaactac agctcagaaa tacatagaca gagaagaatt
      301 aaagcaactg aagctgaaat atgctactta ggaatacaaa gtttgtttac accattagaa
      361 gacactcaaa tatatatccc cataaatgac aaggtcccag cagcaaatta acaggaacaa
      421 ttttcccatc tcaggagctg tcaagatggg ctctgttagc caatttatct tactctagca
      481 catctctggt gcttgtcaat caatatgtga aacatttggt gctgattgcc atttttctat
      541 ccacttcctt ttgcctctcg taccaggcaa tttactgcaa gtcaatcaag gttgaagcag
      601 accttgttta aataaaacac tgttgagttc ttttcacacc aacattttca aaaacagaat
      661 gagctgtagc ttttcacatt tacatttata ctactttttc tgtttttccc aaatgccacg
      721 ctcaagctat aagtcataac taaactcagc cgaaggctca tggagaaaac agggaagatg
      781 aactgaatgt aactgtatat gctttcactg tcaaaaagtc aggctatcaa tggagacaga
      841 gaacattaaa aagtactcaa gtaatgtggg attatttctt tctcactccg acttgaagcc
      901 aggtaggact ccacaccata aaagcaactt ctaacttgtc tgaatttctt aactcaggat
      961 gaagacttca aagactcatt tacactgcac tttaaaggca ggaaggagat agactactgt
     1021 atttataacc atatgaagaa aatccattct cccaactaaa aacttgggcc tctgttcaat
     1081 acac
//
LOCUS       KCKM01000493             716 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7838apa ultra-conserved element locus
            uce-7463, sequence.
ACCESSION   KCKM01000493
VERSION     KCKM01000493.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 716)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 716)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7838apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>716
                     /note="ultra-conserved element locus uce-7463"
BASE COUNT          244 a          130 c          119 g          223 t
ORIGIN      
        1 aagtttgtcc tgcagtgagc gagctgtgta tcgctaggac atcttaatac agttacaaaa
       61 ttaagtgaag ggcaccgaaa gagggatatt ctgtcaccta gtcacttctc cttttgtgaa
      121 gccacacata acatgaagtt aattaaagct tctactctga gaaaaaggaa cgttccattt
      181 ggtaaattta gaagcagctg gttagtttta tccattactt ttgtgctaac atcagttgag
      241 ctcattcaac aatctctttt tatgaagctg tccttcctat gctacctgat agctactaat
      301 tgctgcaact acatttctga attgcaaatt ttctgcactg ataaaaactt tgattgcctg
      361 tcagctacac ataaggaaaa gatcaccagt gctaaatgag gtgttccacg cttggataat
      421 aatgcctaat gaattattca aaaaagaatg cttgaatgaa gcaaacaatt tgaagggtta
      481 ctagcagccg taacagttca acagccaaaa gaacaaaagt atcatcctga aaattacact
      541 aatgattaaa aaatgcgtat taattctaca tttggagaaa aaagaaatgc caatctgatt
      601 ttaaaggtta atcattattt tttcactaat gctctcatct ctgggaaaaa caccctttac
      661 caatattttg ggacatataa tattatgaca tagcatattt atataatttt ccaggc
//
LOCUS       KCKM01000494             681 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7854apa ultra-conserved element locus
            uce-1564, sequence.
ACCESSION   KCKM01000494
VERSION     KCKM01000494.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 681)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 681)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7854apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>681
                     /note="ultra-conserved element locus uce-1564"
BASE COUNT          218 a          128 c          128 g          207 t
ORIGIN      
        1 ttaattggat attctgagtt tactgctcac tccattagtg aggggaggag ggttaaaacc
       61 acataatata caatataaaa tataaaatac gtgtttgtgc acagtgtata attcaatgca
      121 tgagctacac aagatcttcc accacagagt gttttaaaca acagcatttt agcctctgaa
      181 gtgtagcagc aagggaaaca ttttccatgc tcagtttctc tgctattgga acatttgttt
      241 tttattctga atatttcagc acagctattt acctggcact atatttagta ccacagtacc
      301 aagatggcat atataaagat tcaattgcaa ttcccatctg atgtcccttc cctctccttt
      361 ttaccccttt ttttatgtcc gcactctgaa ttcagcacaa agttggtgtg tttaatttaa
      421 aaagaagtaa aacgcgccag gagacgcctc agaccactgc aaatcaccta ctttatagag
      481 gcagtaaaat tgtgtatcgg attaaaagtg atgctgatct gaaatttatg ataactttta
      541 atggcattat aatttttttt ccctgtgcgc tccatcatgg aatcgtttgg atgcacagag
      601 cagcaagatg aaatttgtaa gggaagaaca ttacataggc aagcaccgaa gggggagaaa
      661 aaaaggcagt ggaataacac a
//
LOCUS       KCKM01000495             334 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7870apa ultra-conserved element locus
            uce-1648, sequence.
ACCESSION   KCKM01000495
VERSION     KCKM01000495.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 334)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 334)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7870apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>334
                     /note="ultra-conserved element locus uce-1648"
BASE COUNT          107 a           54 c           61 g          112 t
ORIGIN      
        1 aatttgttat gaataaaatg ctgctgctgg ccttagaaca ttgaatttat ccaccaaata
       61 atatcttaga aataccactt cagaagaaat cagctctaaa taattgataa atttggtttg
      121 tttagaaacc ttttgacccc tgtaatagaa agtaaaaaca catttcagtt attaaagtca
      181 catatattcc ctctggtagg ggaagctttt aattttaagc tggtctctgt tggggccatt
      241 tgataaagct tggaaaaacc ttttcaactg ctgctggtgg atttgggtca gcttcccttg
      301 ggaaaatggc aaaagataaa tttgtagctt ttca
//
LOCUS       KCKM01000496             897 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7884apa ultra-conserved element locus
            uce-2279, sequence.
ACCESSION   KCKM01000496
VERSION     KCKM01000496.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 897)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 897)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..897
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7884apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>897
                     /note="ultra-conserved element locus uce-2279"
BASE COUNT          293 a          136 c          167 g          301 t
ORIGIN      
        1 tcctgaagtc tgttctgcat tacatttgtg gcattctcta cacggtgttt ttaagaactt
       61 acaagactga ttttaaccac atgcatttgg attgcaaaat ttggtttgaa atcattgcaa
      121 agacaaccaa agcccttgtg agttaactct tcgagatgtt attattgtgt gataaattta
      181 gctgatttct gcctgttctg cattatcagc acaagggagt gcatcaaagg tgtttagcac
      241 aaataaacta tgtagttatc ttagaaaaga tgcccctgtt tttacccaac aagatcaggt
      301 ccactttctc tatgatcaga gtattacaaa gctagcaaag aataatttat atcagaggtt
      361 ctgtgatgga atgaaatgga gctcttttga agtatgatct ctgaaagcac agcatgaagc
      421 tcaaataaag tgaaggacat tcgctattac aagtaatgtc cttaataatc ttgttagtct
      481 agtctccctc tgtacgagac aaatggaaca ttattggctt atgggctgta gtaaataatt
      541 tagtttccaa tattcaggct gctttgacag taaattaaaa tgacatgaaa ggggcttgtt
      601 gaataaagaa agtatccaat caaatttaat tggcatgact aaggcagtag aaatatgttt
      661 tataattaaa ccatgttgtc ttggagcttt ataagcatgt atgaatcaaa atgtcaaaaa
      721 ttattctttg atactgtgca tttaaaactt tgcatggtga atagttttct taaacaaggt
      781 tctagacacg catattgatt caaaacgaaa atagttttaa agttttaagc aagtctggtt
      841 ttagcatttg tctgccgatc caaggatttt ctgtaaaaga ttaagataat tttgcag
//
LOCUS       KCKM01000497             952 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7898apa ultra-conserved element locus
            uce-5647, sequence.
ACCESSION   KCKM01000497
VERSION     KCKM01000497.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 952)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 952)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..952
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7898apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>952
                     /note="ultra-conserved element locus uce-5647"
BASE COUNT          247 a          194 c          201 g          310 t
ORIGIN      
        1 accatcaatc tatagaccaa gtctcaaggt agcacacact cagtcttgga cctttggagt
       61 gtcaccacat gaatatttaa taccctttta aagcagctga tttaacatgt gaagtagact
      121 taacaattcc ttctgcttca gccccctctt tcccaaacac atttaaataa accgatgtct
      181 ttgtggcctc tgcaactgta attccgtgtc tcctgggggc ataaggttta ggtgaagaat
      241 ggagaccaca gacccttttg ggacgaggat tagctttaat cttgaggtga ttcttgcagt
      301 tgtaggactc tgtgttctgg ggaatgtgag ctgatggatc attcctgatg ggactctttt
      361 tccacgaaat actaccaatg caaaacagat tgaccttgga gcccacagga gtcaacttga
      421 tgaagagctt agttggagct ggagtgacaa ttggaagcca aatgaatcat atcaagtgtg
      481 accattacag gcctgaaaat tattcttaat taaccactga tcctctgtgg tagcaagttt
      541 ccaaaatctg tgaatccaca agggaacccg caaaaatgta caagtagcaa tttacctaat
      601 ctaatagctc tgctgtgctg cctctttgac aacggtttat ttgcctcttg tttcatgctg
      661 tgttagaaga ggtccttggg atcttttcgg gtttggtgaa accattgaga ggacagtatt
      721 gcctaacgtg ctttacagga gttctaagct tgtgcagatc catacattta tcttctcctt
      781 ccactttgtt ttttttccta gtatttccct ttgaattgtg atatcatgca caagttattt
      841 attattttta atgtggcatg ggtagccttt tgctttcaac actgagaagg tggttatttc
      901 ttatccagag cactagttcc attgtagcat tggccatagt gttggcggtg tt
//
LOCUS       KCKM01000498             920 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7914apa ultra-conserved element locus
            uce-7676, sequence.
ACCESSION   KCKM01000498
VERSION     KCKM01000498.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 920)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 920)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..920
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7914apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>920
                     /note="ultra-conserved element locus uce-7676"
BASE COUNT          239 a          197 c          212 g          272 t
ORIGIN      
        1 ctatggggaa ggtttccctc cgccgtctaa attaataaga cggagtatgc tgatcacatc
       61 ttgcttgggg tgactcggta gttattttgc cgttgacttc acaaggagta ggattgggtc
      121 tgtactcgct gtttaaaata aacaaaccta tatattaaat taggcttccg ccgctgcaga
      181 atgttgcagg gaagtaaaac cgataccgtt aaattacaga taaaggggga gagtccaaaa
      241 tttccaaagt gttctctttt tcttttaacg actgtcatta tattttgatg tgtttaataa
      301 tacagcagag gttaaatgaa acatgaaaaa gggatgtaca ttaaaattga gataactctt
      361 ccttcagtga agtggaaccc agcagatgta gctgcacact gtaattgctg cctgtttcct
      421 gtcagtctga ttaagttgca ttgtccctgc tccaagtgta agaatcagtg gcttcccata
      481 gggcacagca tgggacaact ggcttatgca gtcaaatgac tccgcgcacc tcctgcctgt
      541 cccgttaata gtataggcag acaatataca ttgatgactt agaaaatcaa taggctgtgg
      601 agcgcggtgc aggcgcggcg cctcccggct ccgctccagt cgatgttccg atggtggagc
      661 tcggttccgc ggttcgggag gccaaacaac gccggcttcg gggtgttaat tccgtttctc
      721 gagagttatt atgcgccttc tagtgtcgtt gctcttcttg tttcaaaata taccattgtt
      781 cattctgttc acagttattc atgttttcct ttctgtaata aatccctact tacaggatta
      841 aactgctaat ggtaaaatcc ggtacctatc tggggaacgc gaggccagat tcccagctgc
      901 tataaattgc agtagatcca
//
LOCUS       KCKM01000499             580 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7929apa ultra-conserved element locus
            uce-2126, sequence.
ACCESSION   KCKM01000499
VERSION     KCKM01000499.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 580)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 580)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7929apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>580
                     /note="ultra-conserved element locus uce-2126"
BASE COUNT          155 a          123 c          111 g          191 t
ORIGIN      
        1 agaatgtgag cgggagtgca ttgcctcccc tctccaggtt actcttgatg cactgatcca
       61 catatttccc ataagtatgt aattttctgc cagtcatgac tgtagacccc tcagtgggtg
      121 aaacataata cttcccttga aaataaagaa aatcacctga caaagcatgt tcctcctgtc
      181 ttttgtgggc cattcagtga ctttatttta ctgagagaac aaggggaagt ttataatagg
      241 atcagttttg tttgcaattt gtttctaata gatgccgata agccagttaa ctaggctcta
      301 gttaatggaa attttattgt tttccccctg cggtgctcat gaccttttct tacaagagtt
      361 ggtgattctt gaaaacatgt atctgctgcc ttccctcgag gtttgcttac aacagcaggg
      421 atatgaccat aggctcttct gaacttgttc acagtcctct gctttgagta gaccaaaata
      481 ctttgatcat cttgtcagtg gcaaatttac agcaacatac tggattttgc tccatgtgta
      541 tttctccgaa tataatatcg ccctcaagaa atcaatgata
//
LOCUS       KCKM01000500             730 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7944apa ultra-conserved element locus
            uce-2922, sequence.
ACCESSION   KCKM01000500
VERSION     KCKM01000500.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 730)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 730)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..730
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7944apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>730
                     /note="ultra-conserved element locus uce-2922"
BASE COUNT          260 a          116 c          143 g          211 t
ORIGIN      
        1 tttaagggag caattttgcc ttccaactgt cttttccaga ggaaattaac acatatcgtg
       61 cttttagaca aagtactgta gcataattaa tctctgcact gtcctttcct agcaacccaa
      121 agtaggaaat atatgcagcc aaagtgtaaa gctaaacagc aagcaggttt ctatatttac
      181 aagaatcaaa gcagttaaat gactcagctg cctcctaatg tgggttatat ttgaatttgg
      241 ggagggtgga gggaagaatg ggacattatt gctttaacaa ggtttactgc taaactgaac
      301 atatgttgct cataatgtca ctttctaaat caatgaaatt atcattatag aacatgtcga
      361 caaattagac atgtaaagtg caggctgtat gtggaagaga tgtaatttgg ctctataaaa
      421 agaaattaaa caataaaata tcaatgacag atgtagttag ctaaaggttt tgaggtttaa
      481 ataccaattt gtgaaaaaaa attatgcaga cccaatcagg gtatgagata aaaataccag
      541 ccttcatgca acaagatgat taagtatttg gaccagatgt tcggagacct tagctgtgcc
      601 ctttatttaa ctggcaagca tgctggcaag tccttaaatt tgtaaaatcc aagtaacgaa
      661 ggttagctca gatggaagta ataaaacaat caaatatcaa gagtcgttca tgtctgtgca
      721 caatagatca
//
LOCUS       KCKM01000501             553 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7958apa ultra-conserved element locus
            uce-5172, sequence.
ACCESSION   KCKM01000501
VERSION     KCKM01000501.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 553)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 553)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7958apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>553
                     /note="ultra-conserved element locus uce-5172"
BASE COUNT          171 a          117 c          100 g          165 t
ORIGIN      
        1 catctccagc tcggcttgca tttctttcca tgttggaggc ccagatgaca ataagcaaag
       61 agatcagggc accagcagct ctggagggct gcatttcccc caagccttct gagacatgct
      121 tgtcctaccg tccctttctc cctcctccac tattgttttt ttcactcgct gacaagccca
      181 acattaaaca tttgctggag ttttcatatc gatagtacgt tatattgcca ttactgaaca
      241 gtttggggct ttgtggctag ctaccatgac aatagaagca cagcctggaa ccagttttag
      301 ttaattagag tcaatcaatc caaactttgc taacttactc atgtgaaaca atagtataat
      361 gaaccaaagt ctgcaagatg attgggaaac acaaattatt gcaccctgat aaattaaatg
      421 tgactattgc aaaaccttcc ttctaaatga atactcaaag agggaatgta tgggtgaata
      481 agcataattt agaatatagg ggaaaaaaat aaagaagctg ttaaaacttc acctcaatgt
      541 ttttattttt att
//
LOCUS       KCKM01000502             315 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7974apa ultra-conserved element locus
            uce-4521, sequence.
ACCESSION   KCKM01000502
VERSION     KCKM01000502.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 315)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 315)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7974apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>315
                     /note="ultra-conserved element locus uce-4521"
BASE COUNT          108 a           34 c           61 g          112 t
ORIGIN      
        1 atgtgctgtt tctgttaccc agtaacttga atactgttta atatgttgta agacattgta
       61 gagtttatct ggagctgttt aaaagaaatt gtaatgtaca aatgtgaata gtcacttatc
      121 tataatatgg gtaagttttg ttttgcctat aatagtagat gtttataaga aagtgaagga
      181 caatgtttgt catttcttgc ttgcacaggt tgcactattg aaaaattgag attgtataaa
      241 cctgtccaaa aaaactacaa gataatgatc ttgtagatgt caaataaaag ttattgtact
      301 aacaagaagt ggagt
//
LOCUS       KCKM01000503            1098 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 7990apa ultra-conserved element locus
            uce-2962, sequence.
ACCESSION   KCKM01000503
VERSION     KCKM01000503.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1098)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1098)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1098
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7990apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1098
                     /note="ultra-conserved element locus uce-2962"
BASE COUNT          273 a          223 c          266 g          336 t
ORIGIN      
        1 cagaagatga aggatgagca cttgagatct taagaacttt tccctccctt ctttgcacat
       61 ttgtacccct agggttactg gtactgctcc ctctctgttt caaaatttgg taacaaaaga
      121 aagttaacac taaatgtcat tttataattg caataatgaa cacacagctg tgctttccta
      181 gttgtataat gcacgtcagg atcggtttag gagctcagcc tcgtttcctg cccagatgta
      241 attctggtga ccattattac agtaggaaag ctctcctcgg tcattatggc cacaggcctg
      301 tgtggcacaa gggaggccgg cgcagaagga tgctgcagct ctgacttagc tgtgcaggag
      361 ctttgggctg gtgcaggaag cacacatggg tgcgtatgga gagggcagct acagagagca
      421 cgagcagctc ctgcagatgt gtccttgtgc acatcttagg tgtgcctttc tttcttaaga
      481 aatgttgtct ttatttatga gcatgtgaaa ttctgaggag gagctcttac acttaaatga
      541 acctacaagc agcccataga aaagcaagtg cctgcagcgc taataatgag aactgacaag
      601 gcgatcctgc tgtgtttatt tatgaccttc tgcctttgtt agctcttgtg agaaattcct
      661 ctctaaccat aacaatattg ctcgagcttg gcactgcgct gaggaatcct gtggtgcccc
      721 aaggccgctc gctggcatgg gtacagctca caacagattg gcacggttgt tgaaattttc
      781 atatgttttc cctttattta tttctttact taatttgtaa ggctgtttgc tcctttggta
      841 cgtctgtttg ttctgactag cacccttcag aagtattttg gaactttgcg aagatcccaa
      901 tctactgact tggtcttttc tggtggtctg tctaatgaat aactcagggt gaaaggagct
      961 ttgttttgat agttgcacca ggtacatctt attagaagtt gtgagatagg taaaagacag
     1021 cagtgtgtaa atggtggcac tatttgtagt ctttagcgta gaagactgtg aatggaggac
     1081 tggaacaagt gcttgagc
//
LOCUS       KCKM01000504            1159 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8006apa ultra-conserved element locus
            uce-4437, sequence.
ACCESSION   KCKM01000504
VERSION     KCKM01000504.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1159)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1159)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1159
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8006apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1159
                     /note="ultra-conserved element locus uce-4437"
BASE COUNT          360 a          261 c          204 g          334 t
ORIGIN      
        1 ctagtattca taacctgagt tttatttttt gcttatacat tgcaccttta acctactcaa
       61 aacttcaaaa gacttcgaat taaacttgta caatattcaa gaatttcccc accagcagca
      121 aagatgccag tgtttacaag gaaaaatgca agtcctttta atccctttta gaccaaacct
      181 attactttta tcttcacctt tcaaacaaaa ggagagattt aacaaacctt atcaactagt
      241 cttctattac tcattacttt caacagaaag aaggactggt ttctacttga agacagcttc
      301 aaggggataa acaacattgt caaccatgat agtttgctcg gacagaaaac ccacactgta
      361 ctgaacagtg cattcgtttt aaagcagtgg tcttgaaagg gtttaaaaga gtgtctagtg
      421 aaaagaatct gaaaagattc tgtacttact cctcggcctc ggcctctgcc tgttgatggt
      481 cctccaaaag catcatagtt tctgcttcca aatccacttt caggataagc aggcgttcct
      541 ctcccccgag agcctacagg tgcaggcttc atatggggtg aagaaaaact gctgtaggaa
      601 gagtaactct ctcttcctct gtcctccata aacccaggcc tcaattttga acgggagtaa
      661 ggtgcttccc agctagaccc gccctggttt ctacctccga aagagtcaag gctattccgg
      721 taggagttgt caaatcgacc accataacta cctccgaagc ggctttgttc gggttcatta
      781 taaccatagc cagatctgta cagatctcgc ccacccagag aagacccgga gtcgtaagac
      841 tcataaggtc caaacctgga aaagttgcac agtgaggaga aaaaaaagta agcttactaa
      901 tgttatacat ttcaaaagac aagttatcag ttgacattta tcaactaaaa tcaatttatt
      961 actaaactgg tctgtacagt tgtgttattg tttaatcttg attagggctg ggcaaatcac
     1021 actatgacca gacagaaagc tatctgagcc atttttgcta caaacaattc taacgttcag
     1081 tatgcctgaa ctttggttac ttaaaatttt ctacagtatt tatttactaa aacattatta
     1141 gagcccagcc ctagtctca
//
LOCUS       KCKM01000505             696 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8022apa ultra-conserved element locus
            uce-1630, sequence.
ACCESSION   KCKM01000505
VERSION     KCKM01000505.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 696)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 696)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..696
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8022apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>696
                     /note="ultra-conserved element locus uce-1630"
BASE COUNT          216 a          130 c          129 g          221 t
ORIGIN      
        1 ttacttacgg tgagctaagt gcattcttgg ctcgtaaagg gaaatcattt gctcacttaa
       61 gccagatatc tgacttttga cggcaaatgt cactgcctgg atttcccttt gacagtttgg
      121 caaccctgca cccctgttat agtatccact tatttgtctt gttttcagcc agattaatcc
      181 attctgtttt gacaagaaga ctgatgggta attgataact gtgatagaca caaacagaag
      241 agttggatgc tgaataattc agcacttttc agtatcaata agagaacagg ttgaagaatt
      301 tgtgtctcta tttacactta aactaaacta agtcagccca gacatttatg ctgccagtct
      361 atcagaaaac caaacagtgt acattcggtt tccacccgac aaaatgtttt ataagcttgt
      421 aacaatatgt gtgaagctgc cagaataata aataggtaca gcagcccatg catgctaatg
      481 ttatgttgta agcagttttg ttgacaagtg ctaatacttc tttcatacta tcatcaaaag
      541 cagctaatac aacagccatt atttgctggc tttccaagca agacatgatg gattgtgacc
      601 ttaatatggg ttagccgagt tttgaaagtt aaacaacttg caataaatca cagaattatt
      661 acaatgcagt ttaattggtt aaggactgtt tatttc
//
LOCUS       KCKM01000506             451 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8038apa ultra-conserved element locus
            uce-7313, sequence.
ACCESSION   KCKM01000506
VERSION     KCKM01000506.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 451)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 451)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8038apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>451
                     /note="ultra-conserved element locus uce-7313"
BASE COUNT          122 a          127 c          101 g          101 t
ORIGIN      
        1 agaagccaaa aaaaaaaaaa aagcaagcgc cctctctgtt ttacaagcct tcatttgcta
       61 ttgtttatgt aaacaggtaa attgtttcgt atctcaatta aaaacatctg ccacataaat
      121 gaataccaat taactcatcc tgtttttaat tactccgtta attacacaca ggcagcaaaa
      181 aggatggcag gggaataggg aaagcatgct tacaaccccc cctttcccac cttgctcttg
      241 gcaaggatcc gaaatgtgcc cagataatga tggattaagg tggctggtga aaaccgtggc
      301 tcgtggccag ctccggcatg gcggctccct cccgggccag cggtgctgcc gggacacctc
      361 gggggtattt cccggcaccc tcccaagaga caccacgcgc catcccattt cggaaaccct
      421 gagccccgtg ggacgtgccg gtcctgccca c
//
LOCUS       KCKM01000507             363 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8067apa ultra-conserved element locus
            uce-4590, sequence.
ACCESSION   KCKM01000507
VERSION     KCKM01000507.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 363)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 363)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8067apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>363
                     /note="ultra-conserved element locus uce-4590"
BASE COUNT          111 a           77 c           61 g          114 t
ORIGIN      
        1 atcaaactac tcaattgtca tttgtctatt ccattcttct ctgttgcctg ttggaaatga
       61 ctggtgagcc catacagccc cgaatggctg cacagccact aattagcata tatattgttt
      121 gtcctggtac aaatttatag caaacagcaa tattttacac tccagtaaag ttaataaatg
      181 aggctttagg ctataaaaat ttcatgttct tttgtgcaaa ggtcaattat aaatagttaa
      241 gcacatatcc aaaagctctg ggcttcagca ctggaagaat aaaatttatt ttggttagtc
      301 tgtttgccag ctggacaaat gccactcata cagcctctga gacacctctc tccaaaagac
      361 tgc
//
LOCUS       KCKM01000508             956 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8083apa ultra-conserved element locus
            uce-6649, sequence.
ACCESSION   KCKM01000508
VERSION     KCKM01000508.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 956)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 956)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..956
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8083apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>956
                     /note="ultra-conserved element locus uce-6649"
BASE COUNT          295 a          182 c          157 g          322 t
ORIGIN      
        1 tattcaattc tgaaaaaaaa atccacttcc taataatgta aatgcttggc tatgctgatt
       61 taggccagta tatttatctt ctgttttcta actgtacacc catggacctg aagactatta
      121 gatgccaaac ttgaatcaga tgtgtaagac aaaattttgt tcaatatcaa aacattcttg
      181 ttctcacagg ggtgtaatgt gggtcttaca gtgtaacaag agctatgaat catttgaaaa
      241 tgtgtggtat cttttgtatt ttacacatac ttttctcatg aataaggaag ttttcactag
      301 aggaagactt ttatatgact cccgcttgtt tcctagtcta tttctagggt aaatttactg
      361 taaagagaga ggtttttcat ctgcctgtgt cagttctcca gtgtattgag gtcagcttcc
      421 attctccttg gctctgctgc ctgcctgtat aaacacaaat tccatttcca tcctattatt
      481 tttcgaatca aggatttgtc atgtaaaaga agatctgagg tgactatgtt ttccattatg
      541 caaaacattc cattatgata atatcttcag gacagtctta taaaggtgac ctgcccaaag
      601 aaatcacaaa tgagagcagt gaaacagtag agaaatcctg cataatttgc cctctcattt
      661 aacattcagg ccacagagtt caccctaatt tgccatacac atttcctctg acattctcga
      721 tctgtacata tggtaaaaat atgaattggc agctttcatg ttaagtgctt atcaaaagaa
      781 gaagaaacgg gttgtaaaat gcagtcatat ttagtacatc ctttgctttc ttttgctttc
      841 tctgctaaac tcacacttag taaaatctac agtcaatgaa atttaccttt tgagctcaag
      901 ttgtttccat tcagaacaaa gtaaaaaata tgccagcaaa gacaacccga tatttc
//
LOCUS       KCKM01000509             940 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8097apa ultra-conserved element locus
            uce-3813, sequence.
ACCESSION   KCKM01000509
VERSION     KCKM01000509.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 940)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 940)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..940
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8097apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>940
                     /note="ultra-conserved element locus uce-3813"
BASE COUNT          309 a          179 c          184 g          268 t
ORIGIN      
        1 aaaagtacag gtattgaaaa cacctcttgg atgtgccatg ctgagtgcct ttcacaatgc
       61 ttaaaagaac cttaactttg gtcttttgca aaaccctcac ccatgcagtc cctgttgcag
      121 aataagcttt ctgcttctag gtaatgccta tttcatctgt tgtaaagaca cacatgaaaa
      181 cggactggca ttagccacat atccataaaa gcctagcaac caagagtatt atctttattc
      241 tgaagaagta tagagctttt aaggttcaga aacatatata aaaattgggt tctgaaatgg
      301 tcatttttcc ccttctgcta tgccattaca gcgatcagcc aagcttctgc aaggtaaata
      361 cttttggaaa ataagtggaa atttgctgca aatcagtccc ttttgtgcat ggccacagga
      421 gcatgttgaa atgtttggac actaataccc attcattttc ttggctccat aaataaaagc
      481 cgccagctat gtggcggccg tgaaatggta ttcttcagga cccagcagga agccccatcc
      541 ttattaccac tgcagggggc aggacaggcc caaaatagca agacaactaa atcaagacat
      601 tttcaatgtc taacaaaatg actgtggttt agagagaagc aaaaggttgg aaaaaaattg
      661 gacagctttt atacttagtg taataccttt gttaaacgag ttcagataag aaaatcagat
      721 cttaaaagga gagcataagc atatttctga atatcattta aagtatgtaa cgatcttatg
      781 gaatcataag cagagcacag agctatctga aaggatgtcc tgttcaaatc gtattttcca
      841 aaagggagcc catggttcat agtaaataaa gtcttctggc aatattatcc tgcttcttgg
      901 tttttgatgg aaccaaaaga tttgaagaga cattggaaat
//
LOCUS       KCKM01000510             421 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8113apa ultra-conserved element locus
            uce-3588, sequence.
ACCESSION   KCKM01000510
VERSION     KCKM01000510.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 421)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 421)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8113apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>421
                     /note="ultra-conserved element locus uce-3588"
BASE COUNT          140 a           94 c           79 g          108 t
ORIGIN      
        1 caagttctgt tgtcttccct taaaaaacta tcgtaaaaga gcagctggtg tgtcactgca
       61 gtattagcac tgcaaattct gcaatctcaa tataattctt tttgccacat gaaaatgtaa
      121 aagatacatc ctctaaagaa ctaccagaaa gcatcacagt tgactcacca ttggcgtctt
      181 gtacttgtgg ctcaccactt ctttagtttc aggaactaaa accggacggg caagagacaa
      241 aacaaaaagt tcaaaaaacg agaggaaaag gggaaagaaa tagcacaacg ttcccatagg
      301 aaagggcagg tgcacacaga cagcaggtgc aggtacaggg cacctcacta tccctcactt
      361 ctagatgttc ttccttctct tcatttacat tacatatgtc cttgaagata ctggtaatat
      421 c
//
LOCUS       KCKM01000511             325 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8127apa ultra-conserved element locus
            uce-685, sequence.
ACCESSION   KCKM01000511
VERSION     KCKM01000511.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 325)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 325)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8127apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>325
                     /note="ultra-conserved element locus uce-685"
BASE COUNT           92 a           59 c           80 g           94 t
ORIGIN      
        1 tcccactctc ttttcctttc ctgaagacac atttctatct ggcacagaaa ataaactcag
       61 attgcgggta gttatgttaa tctaattcaa tcctctgtgg gttaggagtg aaattctaat
      121 agtggagctg ttgagggctt ttttgttaat ggcttgggga ttacattgag ttaaaggctc
      181 atttcctaat caaacagaga gggagagagt gactccgaat atttatgagt ctcccagcgc
      241 gagttaaaca ttgaactcca aaagcaggat ttcagtgctg cagaaagagt taaaacccct
      301 cagggctgct gtggagaggg gggaa
//
LOCUS       KCKM01000512             849 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8143apa ultra-conserved element locus
            uce-115, sequence.
ACCESSION   KCKM01000512
VERSION     KCKM01000512.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 849)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 849)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..849
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8143apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>849
                     /note="ultra-conserved element locus uce-115"
BASE COUNT          251 a          166 c          181 g          251 t
ORIGIN      
        1 tcagaggaag actttctatt ctctatagtt ttctatgtgt ttgaagggct ttctgtgtag
       61 ggaggaactc catggaggta tttcccacct caatagcagt gggagctacc aaaactgcta
      121 aagaaatctt agcagcaata ccattccctt gacaacaaag cactatggcg agaatttact
      181 acaattaagc tgcttcagta gaagaaactg aaacttttaa ggaagagata agagagcaga
      241 accctatttt gccttttgcg ccttccccac tgcctggaaa tgttttgcta gtttttctga
      301 agatgtatct atcatcagct ctgcgaatct gctgaatact ttgtaggctt aaaaaaaaag
      361 aagacctcct gattcccata ggcactccaa ccctttcttg tttctaattt ccaaggcctt
      421 ttgagtggga aacaaaaggt taattttctc cagcttgccc aggctgactt aatgtaacag
      481 aaggcagcaa attgtattga tttagtgaca tgcaactgtc cagaaagagc tatttataca
      541 ttattcagga caaacactgt cataatggac aaacagcagc agcatctggg atgttaatgt
      601 ctacaaataa gattattctt tgaaaggatt aggacgaagc attttgtgta attagatttc
      661 tcagtttcag gaatgaattg ccttttagca gtaaaagctg tcactgaggg agccattagc
      721 tccttataac tgaattaaat gcataattag tgacatgatc acattaggat ttgtttcatt
      781 tttaactaat ccggggcacg gggagagcgg ggggggtggt ctttccaggt cgccgaggcc
      841 cacctcggc
//
LOCUS       KCKM01000513             932 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8159apa ultra-conserved element locus
            uce-7647, sequence.
ACCESSION   KCKM01000513
VERSION     KCKM01000513.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 932)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 932)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..932
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8159apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>932
                     /note="ultra-conserved element locus uce-7647"
BASE COUNT          280 a          165 c          166 g          321 t
ORIGIN      
        1 acatttttct ggtgtattgt atggcaagat gtcattaaga attttatggt aatgattaca
       61 ttagacttac agactatttt tactaccctt ttttactgtc acatttgcta cataagccta
      121 attttatgtt attgcaatga tgttccttgg tgtgttcaaa taatcgataa cagtaaaagg
      181 gttgttccgc tgggatcaca ttatatgagt ttataatata caatatatgc cttgatgtat
      241 acatgtaatg tttgctggcc ttccccctct tcttaaatac agaaatttct agttgtgttt
      301 attcccctcg tcagcatact ttatcatatc aaagctccta cagacagtgt agaaccactg
      361 agttatgttt gggtcatgtt ttgcagtgtg ccctttaata ctgtagcttt agaaatgcaa
      421 ttttcagcct ctgcttatta gaatatgata aagtattcct ggtctatgtc cagctccact
      481 aatctccaga ctacacttca tgaattaggc atgaagattt tagtcaatgt gctttcaaag
      541 accaatgttt agggaatcat ggattttcta caagccgagg gagaaatcta taataggaag
      601 aactgatttt caaacatcat attctgtaga agaaatgacc agttctggct tggaagcaga
      661 aaacatttcc ttttagaata ctcaagaact ggttaaaaat gtattgtagg tattaactta
      721 tgaaaggagt agctttttaa aatgcgctgt aaatcctgta tagtgtatag agcctcatac
      781 atgttagaaa ccacgtagac acctcctgaa gcatgggtta aaaaacaagt cacactaaag
      841 ttgtatcagc ttagtggtat taacctactc actgatggac attcatctgc tttacctgtg
      901 taccattagt acgcaataga ccctgctgtt gt
//
LOCUS       KCKM01000514             480 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8175apa ultra-conserved element locus
            uce-771, sequence.
ACCESSION   KCKM01000514
VERSION     KCKM01000514.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 480)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 480)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8175apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>480
                     /note="ultra-conserved element locus uce-771"
BASE COUNT          168 a           78 c           82 g          152 t
ORIGIN      
        1 agctagactt aaaaattgag ctgattatct cattttatct ccttttgttt gtgttctttt
       61 tccagtgtta ctgctagaac aaaatgtatg caaacaaata tattaaatct aaactaagtg
      121 tacacagaac taagttgtgc catgctatca gggtagaaag tttaaggttg gtttctaaga
      181 cattattaat tcaggctcat agagatagaa gagaaaacat aagaccaggg tctgtagcat
      241 agctcatttt tattgtttaa acagtttttg cataggaaat atatccgctt ccagtaattg
      301 actgcagtat gagcagctgc tagcagtata ggctggatat aacagtaaca atcacattaa
      361 gtcaagcttg atttacacca gtttaaaact tgtggcagtt gagttcattt gtaacctaaa
      421 aaaaagtacc aaaaagaaca ttattatcct ccaaccaggc acaataaaaa cctttgttaa
//
LOCUS       KCKM01000515             693 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8189apa ultra-conserved element locus
            uce-3031, sequence.
ACCESSION   KCKM01000515
VERSION     KCKM01000515.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 693)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 693)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8189apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>693
                     /note="ultra-conserved element locus uce-3031"
BASE COUNT          250 a          129 c          102 g          212 t
ORIGIN      
        1 tgttagtcat gctacaaaga tttaaaagct ttgaagattg tcttaactaa aaagagccac
       61 aagaacaaca atgcactttc ttccagtcac tgatcaggct tctaaagagt aactaataac
      121 gtgaatttta aagagcaaaa ggcaacaaga aaatatttaa tagtacaact aacagcgcag
      181 cataccttct gcagaaacct gtctgcttta ctttcctttt atcaatattg ccaagaaagt
      241 aaatttgtca ctgtacagtt gagaatctct caaagatcta ctttaatgtt tcacgctacg
      301 tttgcaaaac aagagtaata aaaataatga caccattatt actcttccct ctttgttttc
      361 agttcatcac ttgcatattt gaataatgaa ttatattcac attatctcta cacttttgct
      421 cttgacttcc tctgctggct gaaagtaaag ctattatcca gttgtcaatt ctgaagagcc
      481 attcagcaca gcagccaatg gtcctgacat gtagatatac tactatgcaa aattatctag
      541 agtacaattt caagctatat atgagaaaat taccagccag tgtaaaaatg aatattcagc
      601 ttcggtgaaa tattaaaaat ttcatcagag ccactttaga acataaataa gtagacaaca
      661 gaattagttg tgaattaggc acaaaaggct aat
//
LOCUS       KCKM01000516             958 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8205apa ultra-conserved element locus
            uce-7836, sequence.
ACCESSION   KCKM01000516
VERSION     KCKM01000516.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 958)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 958)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..958
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8205apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>958
                     /note="ultra-conserved element locus uce-7836"
BASE COUNT          317 a          221 c          175 g          245 t
ORIGIN      
        1 tgttaaaaac gaaaggaaat ttgcctttaa taggagcagg ctccttgttt gcataaagag
       61 aaacttgtca aacagaatat gcgtggcaag ctggtatgtt atagccacga gcacaatagc
      121 cccaaccttg tttttaacta agcaaatccc agagagatca cttttccccc aaaatctatg
      181 cactggctac aaagtcaatg agtcggtgtc tcaaagcgtt cacgaaggat acaggaaatt
      241 tgcagaaggg caccagcttc tcatttcaaa gagagggaaa ctgtacgttt tcatcataaa
      301 aaatgagtgt gaaaaaatcc taaccacaca atagccctct ttcaagtata aagttcagaa
      361 ttagatctcc caagtctccc gtacgttaaa agaagaacag agcataacga tctaaaaatc
      421 cttcacccaa caagcaagga tgaagcagta cccgcctggg ggccaattgc ctctccagca
      481 gcggtaaggc tgttactagg cttgcagtac catttgttcc attacacaat ctcctgaagc
      541 cttttacaga gagctaaaac aactgcctgt accaacacga cacatggctt tccatcccga
      601 ctctttgcta atccagacgc tccaaccatc tttctttaag atgccatatg gttggcagaa
      661 gcctgtagat ctagcagcac atctgcttgt atgttacttc tcccctccaa ctcccccctc
      721 cacaccacaa aagagagagc aaataattat ttaacatgta accagttaaa ctgcatttaa
      781 agaggacttt agctttagat atttaaaaat tgccacagaa gatcgtttgt ctctcggtga
      841 tttgagaaat aacagagaaa caaaacaaag aaatggaaag cacgtgggca aaatgattgc
      901 tgcatttgaa ttatttaaat gactgccatt tcagacctta tgcccgaaga tttatttc
//
LOCUS       KCKM01000517            1065 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8220apa ultra-conserved element locus
            uce-7844, sequence.
ACCESSION   KCKM01000517
VERSION     KCKM01000517.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1065)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1065)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1065
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8220apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1065
                     /note="ultra-conserved element locus uce-7844"
BASE COUNT          278 a          230 c          226 g          331 t
ORIGIN      
        1 tttaacctta accgtagact taagtgtttt gtcaggtccc aatacaatgc ctgagtccct
       61 tcctttgcca gaaagaaatc tgctgaatta tgttgaggtt ttttttccct cccctccaac
      121 ataaattttg aatgtagcca gcatttttaa ctattgtctg gttactttac acaggtatgt
      181 gcctgttttt tagaaagcct gctcagcagc acgactgtca ttcaggattt ggcagaaaca
      241 gccttctatt atttggtagt ggtttggttt ctggagggca ggctgtagac acaaacaaga
      301 gaagtggtcc tcagaaacat tcatgcagca tcctttagga agggagggga ggttatccaa
      361 gtccccatgc tgctgtactc atataaatgc tccctctttt gttgctgctg gactccaaag
      421 aataaaacca aaacacaaag cagaggcggc accactgagc gaatgccata gtgttccctt
      481 aatccatgtg gatcaaaaac acgaacgttt tgattctgta aagaatcttc ctcagcatgc
      541 tggattaatc acatggatta ataaaacact gttgcactca ctcagtggtg cctcctctgc
      601 tttgtgtttt cttttattat tcttcggagc cctgcaggaa caaaagacgg agcgtttata
      661 agagtaccat aggcactggg aattctataa acctctccct ctttaaggta tgcttcttga
      721 gtttttcccc atgaatcatg cactgcagat ttgtctgcgt actaagccct gtgcccgtgt
      781 tcctatctgc ctgaaataca ctgaatttaa aactcgtgct tttttctttc attgtgtttc
      841 tatttagttc tgcaaagagc gtggcaggca gcgcatgtag aacgctctca gttagctgct
      901 tttgtggaga aaagactttt gtgtatcagt cactggctgg agagtggagc tggtgggcag
      961 gggccaactt cagagaaacc ctacaactaa ctactttgat acgcaggagc gatttgtgag
     1021 atacagactc acacttttta ttaatatgtg cttgcatatg aaaat
//
LOCUS       KCKM01000518            1183 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8236apa ultra-conserved element locus
            uce-3806, sequence.
ACCESSION   KCKM01000518
VERSION     KCKM01000518.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1183)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1183)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1183
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8236apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1183
                     /note="ultra-conserved element locus uce-3806"
BASE COUNT          342 a          258 c          272 g          311 t
ORIGIN      
        1 ctcctgccct gagctgacta taaatacagg gtgtctcaag ctgcaggttc tgttcctcac
       61 taggaaaagc tccctcctat caggcaacag gcctgagagc ccttgcaatc cccgctgtct
      121 cgtgggcacc tgctacacta gttagtttga tgttttttta agataggggc aattaagaag
      181 aagccttctt ggactgtgtt gtcaagctat ttgaaaacct aatttctgtc tcctgcaaca
      241 catcccaagt gacggagcag ccagctagcg tctctcccaa accgctgccc ttcagaaggt
      301 gctctgtgtg tgtatgtgca tgagtgagag acatctgcat tccttttctg ttcacccagc
      361 cacagagcac aaatctactt tgacactttt agaaaaatga aaagatggaa tctcgcagga
      421 gcctgcctgt gccggggggg taggagggga gcacgcacag caggagggaa gttgactttt
      481 ctttatacat atagggtttt ttccatgcag agtttaaatt atgcctgata aaaggagttt
      541 cgtggatgtt tcagttcttt caaaccctcc tggcttcctc ccaattaaat gaggtttgtc
      601 aaagccacag ggctctgctg ctgccagaga ggcggacaag cacttcccgc agtgacatct
      661 ccaatcccca agggagaaga tgaaagtgtc agtgccaaga gagagagcag aaaaaaacag
      721 gtacagagac agacagtgtg agagaaagga agagagtgaa gagaaataga aggaatgaga
      781 aaacagattg acataatgtg tcaatctccc cgacacactg ccagagaagg gatagattca
      841 tttcacctgg gtttatgcac catcccatat ttgttatccc ccatattgca gcaagaagta
      901 ccttgtagac atgaaactgc atggtgttat catagcatcc aatgtgttgg gaacagaatc
      961 gaagtgcaca gggctgaagc aagtacagta ccatcataca agaccatatt aatgagtgac
     1021 tcattaaagc tgtgaaaatt aggcaattcc gaataattcc ctgtgtagcc acccctgttg
     1081 ccataatcat ggaagatatt tgttctcttg tgtcacttag gcatcacact attttggaat
     1141 ttaactgtat cattttaaaa ttcttgttgt tatgataata cag
//
LOCUS       KCKM01000519            1197 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8251apa ultra-conserved element locus
            uce-4993, sequence.
ACCESSION   KCKM01000519
VERSION     KCKM01000519.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1197)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1197)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1197
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8251apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1197
                     /note="ultra-conserved element locus uce-4993"
BASE COUNT          344 a          253 c          214 g          386 t
ORIGIN      
        1 ggtattttca ataacgctta acaaagctgc attgctaaag aaaaggcaat atcatgacct
       61 ccattttttt catcttgccc taaatatggt tcttttttca ggcaaagagt taaccatttc
      121 cgtggtgctt actcggcacc atactcttcc tggtggcttc tatcgaactg ttttattgtg
      181 aagcattgca cttttcgaaa atacagccca ccaattcggt ggtaaacaag ccttggcttt
      241 aagacaaagg ttgctttaat ctccatgatc aggctacaga tctgaccatg ttttttaaca
      301 aacctcttat gaagaaatcc tattcatgat tattatctat atgagaataa aaatgtctaa
      361 ttaccttata ttaaatctgt atttatcaat tgcggctttc tctgggaaat tgtaatttgc
      421 agaaatgctc cacattccaa gctgtaacag ttggaggtgg atgtccttaa ggatgggaaa
      481 aaaagttctt ttttaaatgg cacatttact aattataaaa tgctcttatc tctgtgcagc
      541 caaagccaaa atgaacatgt gccttgcact aagaaatccc aggattgtca caacttgtgc
      601 cagctgttga ggttatgaca cctgtgccag catcgccagc tctgcccact gtcatctgtt
      661 ccaactgttc catctgcact gtttgtacca attctcccat ttctgcatct gtaccttctg
      721 cagaaacggg tccaacaatg ccagctgtgt catcggtgcc aaatatgcca gatgttctat
      781 ttgtccaccc tgggccaaat caatgtagtt ttgtgctcat tagttttagc tggtagattc
      841 tatttcacaa ttttttgaga tgcacttaga tcgaatcaat tctaaatcac cactacaact
      901 gttttacatc tatctcacca taaagagaac tttgtttgtc atcctgcgtt cagtcaaaat
      961 tattttgatc ttattaaatt gcgtgagatg atacaagttc tgtcttaatg acaagattgt
     1021 tttttcctgt agaggatgta gctgcagagg aatgaacaga aaaaggtaag ggtcatggta
     1081 tccaggctgt aaataatccc catggttaca gtaaaaagtg cccacacatt gatatacaca
     1141 ctgagaaagc actggtcttg attccttatt ccaccactgc agatcaggag aagccca
//
LOCUS       KCKM01000520             662 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8267apa ultra-conserved element locus
            uce-1768, sequence.
ACCESSION   KCKM01000520
VERSION     KCKM01000520.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 662)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 662)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..662
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8267apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>662
                     /note="ultra-conserved element locus uce-1768"
BASE COUNT          179 a          116 c          138 g          229 t
ORIGIN      
        1 agcatgaaca gcgctgctat aattcctggg tgaactttgt ccctggatgt gtgtttttgg
       61 agtgtgccgg ggtgacattc agcctctaca ttcattttta tgataattca gagtaaattg
      121 tggtgcaata aactcttcaa gcctgtcttt cttgtgaaag ccatgaatca atcagctgca
      181 ggcttttttg ggtcttttca atgtatagtg atcatttaga tttgacatgc attgtgagac
      241 cttggcttag ctcctctcta tggtctgtca ttaattccag cctttgctgt tctgaagtac
      301 agtgaaggat gactgagaaa tcattgcccc tcttcagctc tgttattgca caaaatagca
      361 gcgcaataat tttttgtcaa tgttttactc taaaagcttt ctacatcagt tttgaaaagg
      421 aagcaataaa gcccattcaa tggtatgaat aaaaatcctt tgaggtttag gcgcagggct
      481 gcttttcttc agctggtaat caaattggag ctaaaatgaa attgagtttt cttatgaaaa
      541 tagcctttgt tgctgggaag gctggtaatt cataaacaat aacctgctct tttgtgtgga
      601 taataatata ttcatgttct ttcaataggg taaaagccag acctagtgca ttatggtaca
      661 gt
//
LOCUS       KCKM01000521             781 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8282apa ultra-conserved element locus
            uce-2965, sequence.
ACCESSION   KCKM01000521
VERSION     KCKM01000521.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 781)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 781)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..781
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8282apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>781
                     /note="ultra-conserved element locus uce-2965"
BASE COUNT          200 a          141 c          150 g          290 t
ORIGIN      
        1 gacctacaat ccaatgcact gtattgtatg tgatcatcat gcagtataat tttatagctc
       61 tgggtttttt cccaggtcta ctgaacttct gttatttcca aagtgtttaa aatactctgt
      121 ttgctaatat aaatgattat aattgacagt gcattgtcaa tctattgcaa agctgattta
      181 attaggaatg ccaaggggca tcatttgggg ccaggtatct aagctgcaaa tttttttttt
      241 gatctcaacc tctccctata ggaccgtcca cactggcacc aaaggctgga gggcaagaga
      301 acaaagggaa ttttatgtgt ctgaattcaa attctttccc tttgaaatga agcgtccaga
      361 atgggcaata aaactgtgaa aatggatttc tggccgcatt tgatgttaag cctttagtgt
      421 caagagccag gtcttttttt ctctctcttt cttttaggtt ttgtggtttt tttcctttcc
      481 ctgaatggtc ttgtggggaa tttgtcctat aaattatttc ttacagtttg tatgcataca
      541 gtatggcctt gtcttatagt tagaactcaa aagaaggcta cttcgtgtgt gtgtgtttta
      601 attaacttgt gttttcagta aaattgcaat ggaaaacatc gtcctatttc atgtgagttc
      661 ctatcagccg gcgtgtgaaa acttaatgtt tgttaagcac ttctgtggaa agagtaactt
      721 tcactcaggt cttccttttt catactcagt agtcataatc ctttgtgtca tctcttccat
      781 t
//
LOCUS       KCKM01000522             850 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8298apa ultra-conserved element locus
            uce-4009, sequence.
ACCESSION   KCKM01000522
VERSION     KCKM01000522.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 850)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 850)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..850
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8298apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>850
                     /note="ultra-conserved element locus uce-4009"
BASE COUNT          291 a          160 c          131 g          268 t
ORIGIN      
        1 caaaataata ttacattcct ttgcaagctc cctctaatac aataaaacct tctcaggtaa
       61 aaccaatcaa gtgggtgatt tatgtagttg tacagcacag tttaataagt ttaatcaaat
      121 tactaggcta cacgtaaaag cccaatttat atagaagggt ttcctttcac aaatgaataa
      181 atgttgaaaa cataatttca agaaaaactg gcaaagaaaa aaggggagga atagcaaagt
      241 aaggtaatta cctatctccc tttggttttc ttttttgtac tgtcttccct ttgggtcgtc
      301 tttcacttcc taaacagggg ctcccaccag ggcctgttac ccgtattgat tcaaggcctt
      361 tggaagattt cttaaaagta aattccactg gttctccttc ttttaggctt ctaaatcctt
      421 ccatgtaaag cttgctctgt aaataggaaa aatactcttg gttactaatg ccttaaaaac
      481 agtatttaca ttcataaatc agcaggacta atcgtcctgt ctactatcct agaacacata
      541 caggttgaat aacagtttcc tctgtgtgag ctatagcaga cgatactaca aattatagtc
      601 ttggatacac tgaaaacatt attcaacact aaaaaagtaa caagaaccta tttttagtat
      661 cagcaaaact gaaacaacat tttccttttc tgtgatgaat gctacagatg taagaagcag
      721 ggaaaatact gtattcttta aaaccccatt gggaactgaa aacgtttttt aacaaaatgc
      781 aaagagatca aatgttcact tcagagctaa tttgtttatg atcagaatta tcataattcg
      841 tattcctcat
//
LOCUS       KCKM01000523             522 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8314apa ultra-conserved element locus
            uce-7197, sequence.
ACCESSION   KCKM01000523
VERSION     KCKM01000523.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 522)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 522)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8314apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>522
                     /note="ultra-conserved element locus uce-7197"
BASE COUNT          126 a          121 c          109 g          166 t
ORIGIN      
        1 gccccagttt ggaactttaa gctttctagt taagctatta tggtggccac aaacaggtgc
       61 gtgctttaca gagggtctca ttctgtggtt tccagtggtg tccctggcct tctgaactcc
      121 cctttgctac ctccttcccc ctcaataatt ttttatgaat gatagctttt cagcaccctg
      181 ggaacagctt gttgggaaaa acactcttca tggggtgcag tcaaatccta cacatttctt
      241 caagggagtt ttatgaaagg aatggtactg tgctgcaggt atgacgtatg tatggacccc
      301 ccctccacgc tgctccctta ccccctgcct ctatgattca ctgtgataaa tttgcttttt
      361 aataatgcca atagactttc tcaccacagg tgcttctcaa ttaaaattca ctttgtttaa
      421 aaactggagg cttgtttaac tgagaccctg gtgagagttg tcagatccca ggataggtga
      481 caaaaataga ttggtgtccc tctggagttg tattgaaaat ac
//
LOCUS       KCKM01000524             693 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8330apa ultra-conserved element locus
            uce-1209, sequence.
ACCESSION   KCKM01000524
VERSION     KCKM01000524.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 693)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 693)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8330apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>693
                     /note="ultra-conserved element locus uce-1209"
BASE COUNT          214 a          139 c          103 g          237 t
ORIGIN      
        1 tttgaaaggc aaacaaattt atatgtgtaa cagaagaatt aactttatat aactttcaaa
       61 aggcctccaa attgggatac tgcatcatta agcttttgac atttgtccag ttaaaactat
      121 tgactcatac tttcatttca tccccctcaa attactacag tgccacagct gatctaacta
      181 tattttccat ttcttataaa tagccacaag aaaagtatta attatccttg tacgatttaa
      241 tgcaccaact gccttaacct ttcaggtttt cttaaacacc agcataacaa ggcatatcca
      301 tggcagcaaa tgtgatttat gacaggaatc tttaatttct gtttttaaat atgttaccca
      361 ccgatctgca tacatttaaa ttcgcctgca acacttttct ctgtcttgag gctgttgttt
      421 aatattcaag gatgattttt gtccacatac attttggtct atgtcacctc agattaaatt
      481 attactgttt gcagcctttt tggagcaggc ctcaggccct tatttacaag aatcaatgaa
      541 acagtaatga aaatccattt ttcatactat cagctctggc ctgcttttat ttagttagct
      601 gtgtctaagc aagcaattca ttttgtgcaa atgtcacgtt gataaaaaaa gggacgcgcc
      661 atgaaagggt taatcatgaa ataagccctc tgc
//
LOCUS       KCKM01000525             936 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8345apa ultra-conserved element locus
            uce-7488, sequence.
ACCESSION   KCKM01000525
VERSION     KCKM01000525.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 936)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 936)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..936
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8345apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>936
                     /note="ultra-conserved element locus uce-7488"
BASE COUNT          291 a          213 c          182 g          250 t
ORIGIN      
        1 agccaaaagg aggccctagt gcactgttac tcagaaccat ctcccacttt ctggtactag
       61 agatcactca aaggtgtgtg tggccccagc gctgcagcag ccagtctctt tttcttacta
      121 accacccagc tgtgaaagtg aaagactctg gtgtacacca caccctggct cttaaacaaa
      181 ctgccatttc cacaaaggcc accaattctg aatgtccaaa tgggcaaacc tcatgaatgc
      241 atctcctgca gaatgcgaat ggccctaatg aaacctgtat catttcactt aagtgcattt
      301 gtttagacct gaggacccat aacaagggct gcagagggaa aatatgcaag gtaaattgtt
      361 ctgtgtctca gcagaagaca tacgcaacaa caaaagagga aagaaagaag tggtaattct
      421 gaatttttta tctagttgaa aactgacctt ccttaacttg caactgcctg taggagtccc
      481 aggacaggtt gttctgacat tcttttaaca tcgtttcatc agcacagcca aaactaatca
      541 caagaatatt acccgatgac aggtgcattt attctgtcaa ttaaatcaga tggttaaatc
      601 gaaatgtgcc ccaaatctct cttgtttgca ttatccatat tggcatttct tggctgtggt
      661 tcattgctgg ctggaagtca tccagcccct gcagagtcac tttgcaatac tgtgccagca
      721 agtttccatg ctctgcagca gcggttacac caagaccaga gtggtcctac aggactaacc
      781 tgaaatctta cattgtttca ttatgattta tttaagaaaa aaaagaaaaa gaagaaatcc
      841 ctctcagtga aggagactta gatcaatgct tttgaaatgg aaaaggatat atcacttcac
      901 acctaaccac tagtgagtga catgcatgaa ttaaaa
//
LOCUS       KCKM01000526             529 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8361apa ultra-conserved element locus
            uce-1245, sequence.
ACCESSION   KCKM01000526
VERSION     KCKM01000526.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 529)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 529)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8361apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>529
                     /note="ultra-conserved element locus uce-1245"
BASE COUNT          179 a          106 c           95 g          149 t
ORIGIN      
        1 ttttgcataa tatttacctc aagcttgctt caggctaatg tctcaataat ttccactcct
       61 ttctcaggtc cttaccacaa aggacttgac taatgatcca tggacaaaat gaagcattta
      121 aatttattca ttaatcattc atctccagct cattgaaaac tttaaacttc cacaaaatta
      181 agatagaaca ttgaggagtg attgagggag acagctctca gagagctaaa aaagactagt
      241 aaacacaaaa acaaaagtac attggacaga gtgtctgcaa gtgtcacatg ggcataggta
      301 ttgttctagt ttacataaac tttaagtact gaatttcaaa ccctttattt gggccaacac
      361 ggtggggaaa tctggggaag cgtacagtca ctgtcaacat cgccagtaat tattctctct
      421 tccaattaat ggtgacatag attaattatc agatgaggca aagccaattg caatcagtca
      481 cccagagctg aaattagatc gttcctgaca gcagcatgaa agtcacctg
//
LOCUS       KCKM01000527             720 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8377apa ultra-conserved element locus
            uce-5340, sequence.
ACCESSION   KCKM01000527
VERSION     KCKM01000527.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 720)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 720)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..720
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8377apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>720
                     /note="ultra-conserved element locus uce-5340"
BASE COUNT          223 a          120 c          135 g          242 t
ORIGIN      
        1 ttccaaacat tctcaaagtt gtgtggcgaa gttttatggg cagatttgca ggcagtattt
       61 aaagtggttt gcaaagtcaa tgaatttgag gaagatgttt tccttttcct aaacagtcat
      121 gttgtcaaat ctcacagtgc aaataacaga gataagcagt cgttcaattt attatttaat
      181 tttaattttt atccgtcctc ccacattata taaacttgat ttctgtattg tagccttaat
      241 tgttagtttg tgttggttta atctcactta tttaagtata tttgctttaa taatatttaa
      301 aaaaaccaag acaaagaaac tgtagattag agactttatt ttcagggtaa aatgatacgg
      361 ataagtgagc gtcaactgac cagaaattat ttgcttctgt ctgttagaca cgtaatggag
      421 tcatttaact agtcaaatta ggagctgtag aaatgcacca tgcttcatta ctgagttcga
      481 atgggcacca ttttacattt acgtcaaaaa ttatctcata gcaaattaat gttttcattg
      541 tgcggggaag ctggagctgt gcagtatcag caccacctag aggaatgcac acagatggct
      601 tagctatgtt tgtcaaataa aaaaccggag aggaatagat tctctttaaa aagcaatgtg
      661 tttcacacaa acctctgcct tccccagaat agccctggaa ggtttgtttg ctttgctcac
//
LOCUS       KCKM01000528             456 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8393apa ultra-conserved element locus
            uce-5722, sequence.
ACCESSION   KCKM01000528
VERSION     KCKM01000528.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 456)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 456)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8393apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>456
                     /note="ultra-conserved element locus uce-5722"
BASE COUNT          131 a           89 c           60 g          176 t
ORIGIN      
        1 agtgcccccc aaataaatga aactcaattt cacggcacat tatctctctc aattctttca
       61 gctttcattt tcattaaaat cacagacaac cataaattaa taattacttc aggttgacta
      121 aatgcaggcc acactattta gctctcgttt tcgtacagtg gccctttttg tccatgctgg
      181 aaaaatgtta atttagataa tgtgacttgc cccttgtcat ataattctat tttgcagttt
      241 cactgatcta taatggtctg ttcttattag gtagtattaa ctttatcttt tgttcaatca
      301 agcttcacag tttcctccaa caagataact attgtgaaat atcagaagaa atgttctatt
      361 atctgtattt ctgttatatt ttgattcatc tctgtgttgt aacagtgttc agcaattttc
      421 gtaatttctt ccagtaataa attagcccaa gacttt
//
LOCUS       KCKM01000529             520 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8409apa ultra-conserved element locus
            uce-3335, sequence.
ACCESSION   KCKM01000529
VERSION     KCKM01000529.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 520)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 520)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..520
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8409apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>520
                     /note="ultra-conserved element locus uce-3335"
BASE COUNT          154 a          122 c           89 g          155 t
ORIGIN      
        1 ttactgtcgg tgagcatgct tgcaggggtc accccttccc cttctccccc cctcccctca
       61 agaaaaacat aacccctata gggacacatc aatagctaag ccttaatacc atgtagcagc
      121 attcgaagtt ttgatctctt aaaaagcagc tgctaagaac ccaactagaa aagcaccgaa
      181 tctcattggt ctccccagct cggttacaga gagatgcaaa ataaaaaaag ctggatggat
      241 tttattgaaa aaggcaagaa aagcggtatc tgaaggacaa atggaacaaa gataaggctg
      301 actagggaat actttgcttg ccagtttcat tacactttac ttctttatgc aaccaactac
      361 tgaaattcaa tatacgagca ggaatggcac atgttcatgt tatgacataa acccctttga
      421 tttatgcagt gcacttatct cgtatggtct gcttttctta ttttccctcc ccatcctttt
      481 ttctgtttat tttcacattt ttattaggta tcctctgtaa
//
LOCUS       KCKM01000530             646 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8425apa ultra-conserved element locus
            uce-5095, sequence.
ACCESSION   KCKM01000530
VERSION     KCKM01000530.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 646)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 646)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..646
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8425apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>646
                     /note="ultra-conserved element locus uce-5095"
BASE COUNT          218 a          102 c          100 g          226 t
ORIGIN      
        1 ccatgagctt tttaacaaaa cttgcatatg caatacatgg aacagtttaa aaatcacttt
       61 gatgcattat gaatcacctg taaaaaaata aataagtgaa gacattctca attttggtaa
      121 atatttatag agccaaacaa tatgaagtat atgtaacaat caaatttcta gtgaaaatgt
      181 gtgcaagtag gtttattttg aaaggaaaat tcctactccc agtgtcatac ccaattaaat
      241 tctccaggta atgaccccat ttgcatggag agctgaaccc acaagtggga attttaatgg
      301 gcacaccacc tgagtacatt aattgagagt gacactactt gaactagttt tgtgcttacc
      361 ccactgaaaa ttctactcat attattttta atgtcaagct acaagtcaaa tttcaagatg
      421 atggatttgt tcttttttaa gcattgaatt tgaataaaag aaagctttaa ttccgttatg
      481 cattgcatag ctttaactaa tctgtagttc tgattctcac cattgcttca ttttttcagt
      541 gattggaatt taattttatt cattaatttg tgaataatta gatagaaaat aatgccttca
      601 gcagctaaat tgcttttgga ttgctgttta atgtactttt accaga
//
LOCUS       KCKM01000531             734 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8440apa ultra-conserved element locus
            uce-7025, sequence.
ACCESSION   KCKM01000531
VERSION     KCKM01000531.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 734)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 734)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..734
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8440apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>734
                     /note="ultra-conserved element locus uce-7025"
BASE COUNT          222 a          159 c           96 g          257 t
ORIGIN      
        1 tcaggaagga aaaaggaaaa gtgcatttct taatatctac tggtataagc tcctctaagc
       61 aatttccatc gcaacatgca tttttgctct ctgagaagca tgaatatttt ctctctccct
      121 aagtcccata attgttttat tgctacatta aaaaatgtaa ataatcattc ccctccccat
      181 aataaattag atgcaacctg tctagctctg aaaatgaaca tttcaatatc ttcagacaca
      241 caatgacatc atatcaatat ttaaaaccat tttatgcatg tattccaggt tgtccaactt
      301 cattaagggc attcatcagc cctccagcta cagtgtattc ccattggagt tgtaggcctc
      361 aggccctacc aaacagaaat ttaaactaac ttgccttttt aattcacatt attctcaaat
      421 attctctttt ttacccccct gccatgacta aggcttttag acctggctat gattttgtgc
      481 acatcaacat ttaacacaaa aagtctccat ttttatgcca gaacttgagt acatgaaaat
      541 aatcatcttt cctctctaat ttcccttctc tttccccatc tgcccttatt tcctgagagc
      601 aatagtaact gtgctttttt taatgttgta tgctaagtta ataatttgag ctacaggttg
      661 ataaggaaat gggactgttt gggctttatg tttaaaaatt tacaaacttt tcaaacatac
      721 taagtttcat tctt
//
LOCUS       KCKM01000532             976 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8455apa ultra-conserved element locus
            uce-2713, sequence.
ACCESSION   KCKM01000532
VERSION     KCKM01000532.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 976)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 976)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..976
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8455apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>976
                     /note="ultra-conserved element locus uce-2713"
BASE COUNT          274 a          160 c          222 g          320 t
ORIGIN      
        1 tatatctcag taatgtaagc tgagggaata atgtaggagg ttgtctgctg ggcaatatgc
       61 aatgaatttg gttttgcctt cctgagtggg ctgatagtat tcaaaaaatt cagctatact
      121 ttctccgcag tgataatttg ttgcatttta aattagtaat tatgcctatt gcttattcag
      181 tttagcattg agatgactgt aacttagaca tttataaatg tcatcttgta aatataatac
      241 taagggaatt tgtaaggagt taatctccaa caataagatt aacacgatgc accgtaagtt
      301 ttgtcctact gtctgttagc caggaaagga tagtttcaag caagctatat tgctttcttc
      361 cgagctactg gaggctggct gagctttcgg ttatttacct caatagaaaa ctgaaagaga
      421 aaaagtgaac aaaggaggtc tgttttgcct gtcccacttg ctgggctgtt gtctttgccc
      481 ttttcagtga aggagggggt agagctgggt caaagttgaa aaacactgaa aaggaattca
      541 agccttatat tgaaatgtga atgatagctt agtttgagtg ccgaatgcat ttgtttgaat
      601 tgtggggttt tttcttctgt ctgtggaagc tttaactgac agatggtgat ggactggcat
      661 atagactgcg agaaggtaca gctggatatg tgttcagacc ctgattaaga tgctcagtaa
      721 acaagtacat atctgatgag acttctaata ctggagatac tgatgctaga cactgtaaga
      781 cacactagac atttgattgt gtgaattaag ggcaggcccc tgcagctggc gtacattcag
      841 acttacttgt ctagcctaat tgcattgcaa atactcctct ggattgctct ttagcttctc
      901 ccttctagta aatgttgaat gaggacagaa atgttcatct gggtcctcta ttaactgttg
      961 caagaagctt tttttt
//
LOCUS       KCKM01000533             856 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8469apa ultra-conserved element locus
            uce-7289, sequence.
ACCESSION   KCKM01000533
VERSION     KCKM01000533.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 856)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 856)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..856
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8469apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>856
                     /note="ultra-conserved element locus uce-7289"
BASE COUNT          256 a          176 c          171 g          253 t
ORIGIN      
        1 gaatagaacc ctgctctata aaaaatccct tccaagccaa ttctaataat ttctatttat
       61 cttttatgac attaactgtt ataccagtct gccgacagac agccttacgc tcacatttag
      121 tttaaatgtg gtgcagtata gtttttcatt atcattaacg tgctcctggt gggcagagtg
      181 caatgcagtg gcactggtca cacttcattg ctttatctca tatgacaaag agagatgatg
      241 tgctttggtc caggccagaa gatgaaggca aaaggtggcc atgggatact cctcctgctg
      301 cctaggaaca gcgcaagggc tgcatcgtgc gactcgctaa cagcacgaag gggcagacaa
      361 atagattttc ctctatattt ataaccagca tcattcttcc tttcaggcct ttcagtgcag
      421 gtagctgttt tatatgaaat gaacaatctt tatagacgta ccagagccat aacaaggctg
      481 attttcagcg aggctgaggt atataactct tacagaattg tcaggcctct tgctcaacaa
      541 atcaagccta acttatgatg tttgcagtgt aatttttatt cctgtttgac tagccaacta
      601 cccggtggta ataggatgtt agaaaagggc agtagcaatg tttgtacatg ccatgattga
      661 taggcaaact ctgcattttt catttatatc tcctgattcc aaatcagtta agtttaggaa
      721 aaatgaaaca aaatggcaag aaaaatgctt gcagattgca gcccagcact ctcgtagatc
      781 tgagttcagc ccacatctgc taggattgtc tggaaacatt aagatatcta aatgaaaatc
      841 aatactatat gtgcca
//
LOCUS       KCKM01000534             940 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8484apa ultra-conserved element locus
            uce-5013, sequence.
ACCESSION   KCKM01000534
VERSION     KCKM01000534.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 940)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 940)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..940
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8484apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>940
                     /note="ultra-conserved element locus uce-5013"
BASE COUNT          236 a          209 c          269 g          226 t
ORIGIN      
        1 gtaacacagc ttcaaaggtg tctggaccgg tgcctgagca aactgccctg tgaagtcgct
       61 gcctctgtag gtctaaggaa ggcggtgctt gcacccttct gtttcttagc agatgggaca
      121 aagatttgta aatgccaggc tagcggctcc cttctgcccc ttcggatttg aggaggggat
      181 ttggtgactt ggtctctcgc cgccagttcc gggagagggg aaggagggga gcgatccgcg
      241 gggtggttgg ggagatgggg tggggggacg ggatgtcagt ttatcgatcg cacctcagtc
      301 aggagagctg caggcgcagc gctctgagca cgagcggcag cgtgcttaat gtgattgaaa
      361 ggcagttaaa atggcggtga ccttttcagg gggaattaga ttgcctgcca agagtggtta
      421 gagggagtga taacgccagc ttgaggaagc cgtccagtct gcttcaaagg gagagagaca
      481 gagacaggga aagcaagcca gcagcaagga ccatttaaag caagaaccgc gtggtctgat
      541 agaacagaga ttgctgtcct ctttagatat gaaagaattg tagctaagtt ctttccaccc
      601 gctctctctt cttctcccct ccgactctcc cacctgaaag ccttcctccg ggcacagtag
      661 tgagctagtc accgctgctc ctctgggttg attttccttc agctgatcag ttgcgtcaaa
      721 aataacgcag aagagagaca aactttgcaa atgttaaaat gcgaagcagg acgttttcag
      781 agaaggatac tttctgagaa agaccaacat gacagggatc tgtctgatag attgcaatac
      841 tcttgaagaa ggagaaacac acagggacta cttaactctg aagtttccta tcttgccctc
      901 tttccaagta gtgaagagct tgtatctatt cgttaatgtc
//
LOCUS       KCKM01000535             882 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8500apa ultra-conserved element locus
            uce-2585, sequence.
ACCESSION   KCKM01000535
VERSION     KCKM01000535.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 882)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 882)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..882
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8500apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>882
                     /note="ultra-conserved element locus uce-2585"
BASE COUNT          298 a          176 c          130 g          278 t
ORIGIN      
        1 tttggattct gtgttactgt tgcagcagaa gcttggtcat tgttgttcaa aagaaataca
       61 aatacttctg aaacagtacc cttaaaaaaa ttaatctatc ttgtaatgtc cattgttggt
      121 ttaaaaaacc accaccaaat acaaagcata cgctattatt acccagtaca catttattgt
      181 atgccagagc tcaaaaacgg ttaagaaaat ggaaaagtta ctttttttcc cctacacaaa
      241 tttgttaatg ggtaacataa tggtaagcca tgtttgctgg cattctgtga aacatctaca
      301 aattgcctct gcaaagcatt ataggttgtc agactaatgt agttgaagat aatttggcct
      361 ttcagtgaat tgaacctcac agcacgatta tactccagca ccaagtagag tgtcacaatt
      421 attctttcat gctgaattac catataatgt cataagccta cctgtcataa gtcctgcagt
      481 cgagcttgaa ttttttctaa atctatggtt catggcaaaa aaatgaattt tttgcttcta
      541 atggaaatct gattgttttt atcaacaata aatttcatag caaatcaaag gatatgcttg
      601 gacaaacaat ccgatactca aggttaaaaa acacacaaat aataaattgc tggtgtgtca
      661 tgttcaattt ttactactgc attacactgc aataaccata acaggatcta aattgttgtc
      721 agaacattaa acaaaccccc ttacttcaca aaggcatcct gcctgagtaa ttcacacaac
      781 ggaaacaact atcacatttt ccactgtccc accaccatac catacatcag tgcagtttat
      841 gcatttggac aattttttga ataaattact tccatcctgg ct
//
LOCUS       KCKM01000536            1036 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8514apa ultra-conserved element locus
            uce-4626, sequence.
ACCESSION   KCKM01000536
VERSION     KCKM01000536.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1036)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1036)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1036
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8514apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1036
                     /note="ultra-conserved element locus uce-4626"
BASE COUNT          245 a          283 c          246 g          262 t
ORIGIN      
        1 gtggctgaat tatatgactt gtatatttgg aaaacccgta gggcttgtta gattccaggt
       61 ggatgctaat tttaggtaac agcctgaaca catgctgagg tttcagtgtt gaatcaaaga
      121 cgtagaaact tctcccactt ttacctcagt aggctagaag atttgacacc tgaaaccagt
      181 tttcagacca tctgaatgaa taatgcaact gaccacttga gagctgactt cctctctttc
      241 cctgctagtg ttcagcaaac acatccactt acagggcttg attctcactt ctgcatggag
      301 taagagggtc ccccgtaaga cagagagcca aggccctcga ctggggccac gatcccacct
      361 cccctcccta tctttgcagc cagggaaagg cggagcggta acccaccgtt ccctgcacaa
      421 atctgccatt cagcgaggcg aggttgggaa ataatgaagt cagtacatta gtgcctagcc
      481 tgctgggctc acactgctga aagctgccgg tgggtgaatt tcccagcgtt tggaaacttt
      541 gtctcagttc tgcgggtttg ctcaagtgtg cgatggctgt ttgcaaggga gcttccccgc
      601 tgggtgggtt tgctttcctc ctcgcagctc ttggaaggtg agagctctcc tccatgtgtt
      661 ccctgccccc acggccgccc ctcgctcacc ccacgaacac aatgctcttc cagccggtcc
      721 cctctgctag ggagcttttc cctctcccaa ctcccacact gggacatttt tccacatttc
      781 caggattacg gccactttca cttagatcta tgtgtgttgc ctccacatac aaagaagcac
      841 ttggggacgg gattagtagg attagaagag attcacatat gtccagttca agcaattggt
      901 attcaaagct ttacacttcc aaatgccacc aagagagaga aaaggagctg ggaactcgct
      961 ttgcatttca gcaccttcct gcgggggaca gggccctttg tccgagggag gggacacaca
     1021 caaatcccaa atccca
//
LOCUS       KCKM01000537             742 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8530apa ultra-conserved element locus
            uce-2450, sequence.
ACCESSION   KCKM01000537
VERSION     KCKM01000537.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 742)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 742)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..742
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8530apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>742
                     /note="ultra-conserved element locus uce-2450"
BASE COUNT          244 a          151 c          127 g          220 t
ORIGIN      
        1 ctgtcaaaag tttctgaaga tacattctat ggtgaagtag ttcagcaaat tttccacaca
       61 ggcaaacttt ttctaagtct tctaaacaca aaatggaaaa tgttgaaatc agtttgttga
      121 aacactgcta ttacttgtcc cagacagaag tgcagatctg atcagaaaac aaaatgtatc
      181 agttatccaa atgataaaga tactgcaaca atgcaaataa aataatgaat atgtaataaa
      241 tacctactgc tgtagtttct atgtgtttaa ttaccattgt atttcagcga gtgctgttgt
      301 ctgcatcatt ctatccaaca aaggaaggat gtcccattga acagattggt taatgctctg
      361 gggcaacaga tgtctactgg aactgcagga gaccagcaac tggtggcctg cccatcttct
      421 gaaaactttc aatagactca tgcatatgtt cacacaatag ggcatgtggt agaaatgcaa
      481 acctcttttt aaccctttta tatgctctct ctccctcccg atacacgaag ggctttgttt
      541 tgtttttttc tttacaggat cctcagaaca caggcttacg gaatacagtg tttgttcttc
      601 agcctaacat ctgaactcaa aacataaaac aaaacagatt agaaacttta taaaatagcc
      661 aggctagatc tgacacactt aagaagagct tttaaagcac caacctctga ctgaaacatg
      721 ttcccatttg tgagcatcct aa
//
LOCUS       KCKM01000538             962 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8546apa ultra-conserved element locus
            uce-4335, sequence.
ACCESSION   KCKM01000538
VERSION     KCKM01000538.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 962)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 962)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..962
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8546apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>962
                     /note="ultra-conserved element locus uce-4335"
BASE COUNT          258 a          209 c          223 g          272 t
ORIGIN      
        1 ttcattttac agctgaaaat gagtgagagg gaggttctgt tgatcatttt tatgctgaac
       61 gattttaaag tgacgagcaa gaggaaaata gatgatttca ggctgtagat ggatttcggt
      121 gtcctgcgtg cacatgcaca cctttacagt gtgttctgct gctcgtcggt cccaagcagc
      181 aacttctgtc ttttcacctc agttgcaatg ctgaattttc tgagagcctc aattctcatt
      241 tttattttgc tttggggaaa atggaggcag agatgtttaa aaggaaaaga acccataaag
      301 caacaaaaaa ggaagaaaga caacaaacag cagcgcccct ggcccccact tctataccac
      361 cagtccaaac acagaacgcg ctttagcaga agcgccccag ctctatcata tgtgctgtgc
      421 agagtcatca tggccatggt gcatagctga gagccggaaa gcaaacagct gctgtagcct
      481 gatttgagtt aaaatagtgt cagtgtttag tctggcgcag tgcttcagga gagattggca
      541 gctgggtcaa acaaagtcat tccattggct cccttcccag tcagcttctg ctagtattta
      601 ggtactagtg cagcctaggc cccttttctc agggatagcc taacatctga ccgcaccctc
      661 tttgcttttt aaaaaatgcc ttttcactct ttaagataaa tcctctatta tacaatctgc
      721 cactaattgt gttttaagac tgtttttctc tcgaaagctg acgcatcctg ctctcaacgt
      781 ggtgtaggga gcaggctgtt acagtgccgg attaataaaa ggggccttta tggtttgtga
      841 aagaatatct ctgtgcttag gcaggaaact ttttgatcca cagaaaagcc agacgacatc
      901 taggtaaggc cgtgtatcga atctgctttt atgggatagc ggggcagcca gcgctgttaa
      961 tt
//
LOCUS       KCKM01000539             510 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8561apa ultra-conserved element locus
            uce-1201, sequence.
ACCESSION   KCKM01000539
VERSION     KCKM01000539.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 510)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 510)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8561apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>510
                     /note="ultra-conserved element locus uce-1201"
BASE COUNT          161 a           75 c           90 g          184 t
ORIGIN      
        1 aagtaaaatt taaaccacaa atacgtgaac tgattgagaa tatttattaa ctaaataatt
       61 taataataaa gaaaatgcct acttgattaa ttgttacaga gtaaaaatta caataaaact
      121 gtcttgatca gtgctttgca gaagcaccat tactgtctgt gcagttgttt aacaaggatt
      181 taattggaaa gataagtgaa tgcacattta aaagtattgt taatttgctt tataatcacc
      241 ccatccttca cagtattgac agcaccaggc acaaacccct ttctcttttg caagtattat
      301 tttccatatg tgcacaataa attctgaagc agtaattgga aattttatgg atttcaacat
      361 acctagtgtt ttgagtttat aggtgtcata tcccttctgt aaaggtagct catatgtggc
      421 attttaagaa aaatggttgc ttttttctta cccatgggct gttttggaga ctgtggtgtg
      481 gtagtttgct gattttttag tttggggctt
//
LOCUS       KCKM01000540             396 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8577apa ultra-conserved element locus
            uce-1986, sequence.
ACCESSION   KCKM01000540
VERSION     KCKM01000540.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 396)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 396)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8577apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>396
                     /note="ultra-conserved element locus uce-1986"
BASE COUNT          131 a           69 c           72 g          124 t
ORIGIN      
        1 actccataaa catcttctgc caatttaaaa aaatatggta atacaaagca attttgtttg
       61 ctctaattct ggtgccagat taggtaatta gaatggtgtc taatatcctt ccagtaaatg
      121 tttctccata aatgcaaaat ggaatcgagg gtctgcgggt tacattagct taatgaaaac
      181 aagactttaa tgcatattgt tacagcagcg tttgaatgca cttattaagg cccgtgttcc
      241 cacaaccata tggtttttgt cattaatgtc tcctttgagg aaaagcacta aaattagaaa
      301 aaaagttgca tctttgattc caatgatccc aactaaatga tatggtaacc atatggcgtg
      361 cagtactgac agaagaatct ggaagtgtcc ttgtaa
//
LOCUS       KCKM01000541             408 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8591apa ultra-conserved element locus
            uce-232, sequence.
ACCESSION   KCKM01000541
VERSION     KCKM01000541.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 408)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 408)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8591apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>408
                     /note="ultra-conserved element locus uce-232"
BASE COUNT          131 a           56 c           76 g          145 t
ORIGIN      
        1 gatagaacat aaaaaatgta ccatagttgg taacctttat gacttgggga accatgtatt
       61 tacatatctt tatcttcgca tgtgcgtatg tgtgtgttgt gtatatattt ttaacagttg
      121 acagctgttt tagagcatac agagatgcca agctgaatga gggtcttgat tacttcaaga
      181 ttagctatct aaagtttcta ttcattttaa gtgttgttag tgcgaagagt cattagtcac
      241 ttccttgtct catagaacat cagcatacat ttacattgtt aatgaacatt tggggtaaat
      301 gaattaatgg cacttttaaa catcaattca atactaataa ctttgtatgt catagaaatg
      361 ttaaggttgg gataaaaatg agaaaccttt tcagtcaagg taactaat
//
LOCUS       KCKM01000542             354 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8607apa ultra-conserved element locus
            uce-4159, sequence.
ACCESSION   KCKM01000542
VERSION     KCKM01000542.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 354)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 354)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8607apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>354
                     /note="ultra-conserved element locus uce-4159"
BASE COUNT          128 a           79 c           57 g           90 t
ORIGIN      
        1 agacaagctt aaataaagtt ctatgaaaaa ggcaagacac gctgtaattc caagaaccta
       61 ttacttcaga caatttactt caaaaaataa aatcagaatg gtaaatgatt acccaaaagc
      121 aatcatgtca tcatcactga aagatggaat aaaataattt tttgtgaagt ggctgaatga
      181 gagcaactta aaagccacgg agcctgtcag aagcacatta tttcttttta caccccgttt
      241 cccaattcat ctcagtgctg ctgactaacc ttggctccca gcaggtggag catttaaaat
      301 aaatagcatt tcctacaaaa cgcgctccaa ctgccccatg acagacgctt ccaa
//
LOCUS       KCKM01000543             469 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8623apa ultra-conserved element locus
            uce-2472, sequence.
ACCESSION   KCKM01000543
VERSION     KCKM01000543.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 469)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 469)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8623apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>469
                     /note="ultra-conserved element locus uce-2472"
BASE COUNT          131 a           82 c           92 g          164 t
ORIGIN      
        1 aagctatggc aaggtccacc ttgagcttac tctttgggca tttcctatat tttttagcgt
       61 gctgaatatt cagtgtccca ttgggggacc tcgtaacagc tgtggatagt ctttctctct
      121 aagcatgtct attcatttgg gtttcttctg catataaatg cattctctgg ccatttttaa
      181 ggatgtgcct gctacacagt ttcattaaac tgctacgtta tcgggtaatt gtttaaacat
      241 aatgccatag cactatcaaa aggaaaggtg aactaatggc atttgcaaat gtcagggatt
      301 atcttaacac ttttattata gtttataaaa agtaggttca gggcattcca tggcaattat
      361 ttccacagaa attggttatt taaataaatt gctaattatc tggatatgac agtattgaaa
      421 acccggctaa tgagttattt gataagtgta gcttatggtg gccacctac
//
LOCUS       KCKM01000544            1199 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8637apa ultra-conserved element locus
            uce-2527, sequence.
ACCESSION   KCKM01000544
VERSION     KCKM01000544.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1199)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1199)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1199
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8637apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1199
                     /note="ultra-conserved element locus uce-2527"
BASE COUNT          313 a          342 c          256 g          288 t
ORIGIN      
        1 tgcaatagct gggaagttgt tatcccaggc agatagaacc tggagagata ggaggtgaat
       61 ggaacctagc tctccctttc tgggaggcca agccagccgc aaacctgcag tgcctctgtg
      121 cctcccaacc tgagccaggt ctgatccacc tagcccatca gttctgcctc attgattgca
      181 tgcaacctct tccaaatgct gctgtaaaca gcaggctctt ggaggaggct caaggtggct
      241 ccagtaaggt tcacgggcca tctcctggct ctctcctctc caagcagagc cactttgcca
      301 tgtgaaggaa acctttggca gctatcttgt gctgggatac agggcttgtt gagcttggct
      361 gagtaatccc agccgccccc atcactgcag ctgcatgcat cctcgttctc ccaacccaag
      421 gatcgctgcc tcgctgaatc accccattaa attgctaata tcttattgtt ctttaagatt
      481 tcgaaacttg ctgcgaaacg tttacagata attttttttt gcctgcagtc actgtgccta
      541 atgcccagtc attgagtgcc atatgtgttt atatgcactg caattttcca cttgattaca
      601 ttttaccaca aacactttca tccactccac aaagacagca gcaacacatc cataacattc
      661 agagcagctc agacagacag agcccagaca aaagtgtctc cactggccat ggcacctcaa
      721 aatgcaagat tcctaaagcc atctgaccca acctccaatt ctgaagtccc caagggcaca
      781 agcacctcta tcacttacag gaacatgaaa agttagcttc acgctccagc tttcccatta
      841 agcaccgggt gctgctcaca agtctggaac agctgcacaa catggacatg cttgccaata
      901 accagggata tctcagattt tccaggatac aggggatgac cctagcacaa tacaaggatg
      961 cttagaggct gaatctgaat ctgcagaaat ccacggggac agcagcagca cagaccagtt
     1021 ctgcaattag atcctgcacc tctgaaagta gaggcaagct cttgttcagc ctccaactaa
     1081 ctgtgtgtag tccagcttgt ccatagtatg gatggcagct cctgactgca acaccttcat
     1141 ctcagcacgt agaactctga ccagaaggtc agcccctgcc tgaggacggg ggtcccctt
//
LOCUS       KCKM01000545             762 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8653apa ultra-conserved element locus
            uce-6922, sequence.
ACCESSION   KCKM01000545
VERSION     KCKM01000545.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 762)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 762)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..762
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8653apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>762
                     /note="ultra-conserved element locus uce-6922"
BASE COUNT          229 a          137 c          154 g          242 t
ORIGIN      
        1 ttgatgactg gaagcatagc ttggatagga ttatattcta ctagtacttt ttgagatctg
       61 atagaactgg aagcactgct tagtgaagat tttgatgaga ctaaaacggg actttacata
      121 atgttaactt tttttttcag agttactctg accaattcta gtaattgccc atatattttt
      181 agtttcattt tactggattt ttatacccgc gagtcaagta atttcttgac ttcatgaagt
      241 taaataacag gcaaagagct tgtgttagtg ttgatgtttg ttagtaactc gttaggcagc
      301 gataccctga gcacctgggt ctggctgccc ccaatctctt attaataagt ataaggttaa
      361 agttacgtga cctgtttcgt aggttctgct cagatacttc acacagagtt gtgtaaatgt
      421 gtaacactgc aacgtgaggt ttctgtacac gtgtttcttt tttcttgcag gtttgtgtat
      481 tagacctacg gaaatagcgc tactagttgg aagccatgga ccgactatga atgtgtacat
      541 agccaaaatg actgtccctg acccatgtac tgctatagtc ccaattgaac catggccagt
      601 ccactacagc caaacagaaa agaaatatat acatatactg tatataaaaa agaggaaaaa
      661 aaaaaagtta caccctgaag aggatgacag agttttgtca cagcttgtga atcctgttca
      721 ccaagtgctg gaatctgtgc cccaaaataa catttaaagg tt
//
LOCUS       KCKM01000546             620 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8668apa ultra-conserved element locus
            uce-5734, sequence.
ACCESSION   KCKM01000546
VERSION     KCKM01000546.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 620)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 620)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..620
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8668apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>620
                     /note="ultra-conserved element locus uce-5734"
BASE COUNT          192 a          137 c          109 g          182 t
ORIGIN      
        1 aacgtttcaa tgcctgctta ttcaagccaa aggtgtctgc ttgtagttaa tatttctgca
       61 gcttttgcaa gcctttgtct ctacagagag caactattat tgctatttca tcttgcactg
      121 atacggtaac ttgcattgca gccacagctg tccctccagc cgagcacatt gctactctgc
      181 cacagcagaa gcaaaggaga aaaatcggaa ttcaagccct gtctgaaaag taaaagggac
      241 aaattagttt cttgtcactg cactgcaata aatacattgt catttttata ccccagtgaa
      301 tcatattctc catttccccc gtaactatta tacagtctgc tggcagtaca tcattttttg
      361 gtaattttat tttcaccaat tgttttatga aatttttgag ttttatggac actaaaacaa
      421 atctagcctg cgagtattat agccctttaa atcaccggca ggaaatctca aggttcctcc
      481 agactgtgag agaaggaagc tttaggaaag aaagattgct cctagcttat aaactgagca
      541 aaaacccaga gataagtttg taaaagggac atacatcatc actggcaaaa accaggacgt
      601 aaaacaacat ctctccgctc
//
LOCUS       KCKM01000547             767 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8683apa ultra-conserved element locus
            uce-4248, sequence.
ACCESSION   KCKM01000547
VERSION     KCKM01000547.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 767)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 767)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..767
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8683apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>767
                     /note="ultra-conserved element locus uce-4248"
BASE COUNT          239 a          132 c          131 g          265 t
ORIGIN      
        1 tccttcgatt tgccaaacat ttctgtttta atttgtatgt atgcatttgg aattcagcta
       61 aacaggaatt ataaactgta cacttttagt actcttccct tcctgaactt ttcagagtgg
      121 ctagttgaag acttctgtgg aagggttcac aaatacctag ctacaatatg ctgagcagta
      181 cttattaaaa catatgtaag cctgttaaat ttagccacag tgtaaatatg ttattcctgg
      241 gacaagaatc tggcaaagta tggaaaagct ttagcagttg tattagtaaa cctgacagac
      301 ttgagaaagg agtattgtat ccttagaaca gtggctgcca gaatttaatg tcaacaatta
      361 aaatttattt tgatccttac ctagtgttta ttactgtttg tatacacaac agaccttact
      421 aatacagaga tgcactatta gatggaatta ccatctgttc agagcgaaat gctggcatct
      481 gtctttgagc ctaaaactaa aatgatatta tttcaaacaa aacaaaatta actgctcttt
      541 acttaccaac ttcatttttc tgtacatgtg tgtgcataaa cacatgggaa aggcttattt
      601 gtaacgacct gtgtagcaac agctatattt agatatatga cttcaacgta agctgtatgg
      661 accatctgtc tttattggtc ttttttgtgc cctctgctac acaatggcat gcagcaatca
      721 tgggctttta aatactgttt tagctttata atatattaaa tatgtat
//
LOCUS       KCKM01000548            1074 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8699apa ultra-conserved element locus
            uce-4592, sequence.
ACCESSION   KCKM01000548
VERSION     KCKM01000548.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1074)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1074)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1074
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8699apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1074
                     /note="ultra-conserved element locus uce-4592"
BASE COUNT          337 a          196 c          242 g          299 t
ORIGIN      
        1 gactggagca cacagtaagc atctgctggg aaacaaattc tttgtctaag catttttgca
       61 agattgcata taatcagagc atatctcatt ttgcgttttt gttgacttaa tggtcagtgc
      121 agtggtctac cttgtgcctt tgagtggaaa agatcttttc ctgtgtatga tacggagtcc
      181 agggagagga gaccggactt ttgtacaaga gaaaggaaag aacagggggt cttgggcaat
      241 gtataaatac tctgttgagt atgaggttgt acaagctgca cagactccat taagaaaagg
      301 ccacggatag acatgagaac ggttacagag cccgtgcatt atctcagctc tactaaaatg
      361 aaaatataca gtacaaacaa aagatctaca gctttgtgga gagattggga gagaaaggag
      421 ggggagcaac tgaatgttgg gctttgcaaa tgcatgccac agaaaatctt ttcttccctc
      481 tagccattgt tctattgtct ttcaaaggcc attaaaatga acagcaggtt gtgatgaaaa
      541 tttcattaag ccctagttaa gtcattatga gagtgccata ttcatgtctc tgcttactcc
      601 ccatccagga aaaaatgaat aggaaagggt tggatttttc ttccctttct ccttaaaagc
      661 aaactaacaa aagttcagaa gttagaacag aatgggaaat gggacacgaa acaaaaggag
      721 gccagagagg tgagctggct aggaagaaaa ttagacttgc ataagagcct tgaaaggtgg
      781 tgagggacaa atacatcatt ttgacaagtc tccctccccc ttcccttcaa ccaacatgat
      841 tgtttttaga gtggctaatt aaaaaatata catttctggg tgcagatggc aagactgttc
      901 ttagagatcc tccagaaata caagtctctt tccctaagag tactgcaagc acagcctctt
      961 ctctgtttga actccagcag aaaatctact tattgtcatg tcttcttgac atagtgctaa
     1021 agtaaagttg tcagtcatca gtggttgctg gtcaggtaat tagcatatta atga
//
LOCUS       KCKM01000549             422 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8714apa ultra-conserved element locus
            uce-5953, sequence.
ACCESSION   KCKM01000549
VERSION     KCKM01000549.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 422)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 422)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8714apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>422
                     /note="ultra-conserved element locus uce-5953"
BASE COUNT          164 a           56 c           75 g          127 t
ORIGIN      
        1 atgtttcagt tgattaggaa attttaatta aaatgcaaaa tgatgtaaaa tttcttattg
       61 tacagaaaaa taaaccattg cctactaatg ggttaaaaat aaacagaagc cttcgtataa
      121 aaaaaaaggc aaaagagaga gaaacggtaa tgacagtttt gaagtatcca gtacctgttg
      181 tgacaggaat aacaaattaa ttgggactat aacggattct ttgtaaaggt gaagtaaaca
      241 cacttgactg tatatttttc accatcagtt aagtctcaat tggttctaaa aataaacaga
      301 agacattgaa cagttttaat ggattttgac acctaggtat tatgctgtca ctccagtata
      361 aatgaatcat aactttagac tgcgccaagg aattactaca catttggaga aaatttatgg
      421 tg
//
LOCUS       KCKM01000550             863 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8730apa ultra-conserved element locus
            uce-4999, sequence.
ACCESSION   KCKM01000550
VERSION     KCKM01000550.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 863)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 863)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..863
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8730apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>863
                     /note="ultra-conserved element locus uce-4999"
BASE COUNT          257 a          147 c          204 g          255 t
ORIGIN      
        1 ctctaaaatg tgctttaaat acatatgaac gcttctgtag ggttttccac aaagcattgg
       61 taattccgag ttagaatttg gctatccagc ctaagtaaat gctaccaaat tatttataca
      121 aattacatga aaaccaaatg gagtaataat gcttactgtc cgttccagct agactaccaa
      181 ggtctgaaaa tgccactttt gtttagggtg gacagagcac ctctgcagaa gcagtgtagc
      241 aggtgaatgc agcaccgtgt ttggccatgt gatggcagaa gaatgtttta tgagttcctc
      301 tttcatgttt attctaatgt aaagatgttt ctgtgtctag ttctgcattc caggaagcag
      361 acatagtaag ctctaaggac agtggtcatg gagacagtga gcaaggagac agtgatcatg
      421 atgccactaa tcgaggtcaa tcctctggta agtctgataa gagaatggaa atagtagatc
      481 tttaagtagg gagactacaa agaacagtta cttataggaa tatagtacag gagtggcata
      541 aatattgtat cagaagctgg ggttaagtaa tttttctgct acagttactg cagcaaagag
      601 acaattttga acccctttca ttcacagggc agagtttatt gtattaattt ggttgggggg
      661 ttggtacgtt attctgtagc atttgctgta gcaagacttc ctgcacgtta aaccaaagtt
      721 gttgctacat ttttttcctt caatggcaga ttcgcggaat ttcaaagcat tagcaatttt
      781 gttcagtagg cacttcagct ggcatggcag cgtgaagtgc agggggagtt cccaagggaa
      841 agaatgaacc cagtgactga atg
//
LOCUS       KCKM01000551            1017 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8746apa ultra-conserved element locus
            uce-5570, sequence.
ACCESSION   KCKM01000551
VERSION     KCKM01000551.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1017)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1017)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1017
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8746apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1017
                     /note="ultra-conserved element locus uce-5570"
BASE COUNT          274 a          253 c          234 g          256 t
ORIGIN      
        1 aaatagcatc agtattttat ttatccctgt gaagcttggc cagtatattt tgcgccgaag
       61 gagcagattt accacgagga gggagaactg ctgcctccat cctttttaac gttgcccact
      121 gccaggctgt gagctctgcc ctcccagccc ctgtccaatt ccatggccaa atctactgca
      181 gaagcgccga gaagggctgc agatgctgtg aactctcgtg ctcgagttta cagttcggag
      241 cctgtgcctc ctctcctcca aaatctggga aacaaacacc catcagtccc attcttccct
      301 cttggccttc caaggggtgc agtcaacggg cttctgcgcg tctgtgttct aacagaggcg
      361 aggaaagcag ggggtaggag cgggggaaac gcgaacacca aatcctccat ctgcagccca
      421 aagtaacagc gctggggcgg gggggcagga cagggagcgc ggcgcacagc agcaatacaa
      481 aaaggaggtt ttgtgccagg ctcatcagtg tggcagggta ataaggtcaa tgtgaaaaca
      541 actggaaggc acattcccca gtaaacatgt gctgagtgaa aacggcccga ccttatgttg
      601 tagaatccaa acccattgag tcaattgcca gaaaacatga catgaccttt cagattcagt
      661 gagcatcagt tccaagagca ggctgccgtg ctcttttcca tttcactgct gcccccggag
      721 ggcctcaagt cacctgaaat aatagcttgg gctcaaaatc tccactcctt taatgaaaaa
      781 aaaaatgcac atggcatcaa gtttgaccct agtggcagat tttttatatg cttagctcaa
      841 tttctttaaa cttaacaact gtgcttattt atttatttat tttatcttct aaaatcttcc
      901 cagagctcag gttttcccac agacaacgca tttttggtga tggaagaaac ttctcagttt
      961 tgtgaatgag gaaaataatt aataactaat gaggtgctca ttccaaccca cagcctt
//
LOCUS       KCKM01000552             916 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8762apa ultra-conserved element locus
            uce-3215, sequence.
ACCESSION   KCKM01000552
VERSION     KCKM01000552.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 916)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 916)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..916
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8762apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>916
                     /note="ultra-conserved element locus uce-3215"
BASE COUNT          264 a          142 c          182 g          328 t
ORIGIN      
        1 tcctgtgttt acaggtcaaa acctctcgct atccttaagt catgcgtcaa catttaaagc
       61 taatctctca ttcctcattg tccagcaggt ggctttttcg tgtattattt aatttttggt
      121 tatttattgc aagtggaaaa tgcaatttaa cagtactatc ctgatggcat tttaaaaaag
      181 aacagcagtt tttcggaata tcctgtagta tatgacgggg tcaaggaaag catctagaga
      241 tctccaagta tacaatctaa attaagattc caaacaggca ttacagatgc cggtaacttt
      301 ggcaattatc attttgtttg gtgaacagta gtaaaacagt gtgcggtaaa agtgtttaga
      361 gagagaggat aaataaattg aacagttttg caatgcaaag tggtttgtgg tgtttttgag
      421 gatttcttgg ctcttgctta actgctattg tgaagcctgg agcagatttt cccattgcta
      481 atgccctaga agtattaatt cactttgata tgctaattag agggcattat gcaagaaatg
      541 agattaagtg gcagcatgaa gccatttgcc tgtcagtaaa ttgagagctt tagcatcagg
      601 aggagctttg ttttttctga gtttctcttg gttttgcata taaataaaat tgattgaaag
      661 gtctagagaa gcttctagaa cattggtggt tctttttctc cttctatgat tatttaaact
      721 tcatgttaaa gcctttctct gaatattaat tgatctaatg ggagataccg aacatgaaga
      781 atttcattgt attctcagtt actgtatctt aacaaaagga aagtattaga attctttgtg
      841 tcatctgaat tttgtggtgt tattttagat atatcttaca gctttgcatt gtaacctctg
      901 actgctcatc gctcct
//
LOCUS       KCKM01000553             541 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8778apa ultra-conserved element locus
            uce-6352, sequence.
ACCESSION   KCKM01000553
VERSION     KCKM01000553.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 541)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 541)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..541
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8778apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>541
                     /note="ultra-conserved element locus uce-6352"
BASE COUNT          181 a           88 c           94 g          178 t
ORIGIN      
        1 acagaaaagg tgtttatttc tgtactaggg agtttaacag acctatggac tgatggtttc
       61 atagggcatc agtcacactt ctacaacatt tgctgatata aatataaaag cttcatttta
      121 aaggataaat aaagcaacac tattatctaa acagggtaaa atttaacatc cttgtggttt
      181 gtggaaattt ttgatgtgcc tgctggcttt tcaataaaaa tcaattatgc cttaaatgcg
      241 agcggtagtc aacatactac agactataaa ttcaatttca tactcagaaa tatggattag
      301 ctgaacctga tgcccttcca ttgatttcag aaagcaaaag ctgataaggt aaataatagt
      361 aagaagctct ctgacactcc acatcaagtt ccggatttcc atattatttt tgtaagaact
      421 ttccagtcac tacaatatcc tccttgtgaa atatgtatga tgaatagata ttatatggat
      481 tgctgattca tctctattta cagaatggat atttggcttt tataatgcaa ggtgggaact
      541 g
//
LOCUS       KCKM01000554             797 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8794apa ultra-conserved element locus
            uce-7104, sequence.
ACCESSION   KCKM01000554
VERSION     KCKM01000554.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 797)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 797)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..797
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8794apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>797
                     /note="ultra-conserved element locus uce-7104"
BASE COUNT          248 a          130 c          140 g          279 t
ORIGIN      
        1 ttagcagaga gatctgcaag tctctataaa cgggtggtga ttatacagct gcacattcat
       61 ggctttaaag ttcccttatc aaaacttgtg aaattatttt gatgatgcag aaatcaataa
      121 aatatttact tagtgtaaca ttttccttct gcatttgcaa acttgaaaag caaagcaatg
      181 cacaaaccat tattatattt tccaaagtta gtaatggtgt gtttttctgc aacgctatgg
      241 gtgtatgcaa ataattactt ttttttttcc tttttgatac aatttcatta tttgcattgc
      301 tactagtggt tcaccaataa aggcgaacat cacattagga ttcatgacag ttttcacatt
      361 gtattatcaa tatgtggaaa taattgtctg ctccaggatt aaattacatt attgtgtatc
      421 tttttcatgc ctaataaata atgatggatg gcttttattt tcatcaccac ctgcaaccat
      481 ttagtcacct cttgattgtt gaagataaaa taataaaagg caagtgttat gtggcaagta
      541 gaagaatgca gtcaaaacag ttgcatgcct cgtatttctg tctacctttt tcgagtccct
      601 aaagagtaat agatggtgtt ctgggaaggc cagcaacctg caaactggca aacagttctc
      661 ataaatttgg caatggggga aaatgtggaa aacttttttt tctcgtaaaa cagtaattat
      721 ttcttagcac atgattcata atctgaaaat tgggcttttg ttctgctgtg caaatcagtt
      781 acatgcaatt agaatgc
//
LOCUS       KCKM01000555             580 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8810apa ultra-conserved element locus
            uce-3417, sequence.
ACCESSION   KCKM01000555
VERSION     KCKM01000555.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 580)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 580)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8810apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>580
                     /note="ultra-conserved element locus uce-3417"
BASE COUNT          182 a           96 c          110 g          192 t
ORIGIN      
        1 ttaaatgctg gttttttgat gtaatccttc ttcaggttac tgcttagtat tccattacta
       61 taaaacatat ctctgtttac tattcttatt gatagcgtac agagcaggaa aaaattatta
      121 aatgctagac tgaattagtg caagagtttt gtaatggaat caagggagac atttctgccc
      181 agatactgca ttcagtgggt cttgtagtta aagacctgga agaggaaggg ttatctacaa
      241 cttcagcgag tttattatgg cttagtgatt tgctgattga tttcatttgc tgtcagttaa
      301 ggctctctta atgtcagctt tctttgcata atgcctcgaa ataaagactg atgaagtttt
      361 tcagattgat gctgcttaca taaactgacc ctgatttgcc cttctacatg acaatataag
      421 tgacagcagt tagacaaaaa tatagcaatg aatatgcaac ttaaggatta tgaaaagcac
      481 agtaaacctt tcagaatata aaactaggca taaaacccta tgctgttctg ttaattccac
      541 agttgtccta tattcaagaa gtgaactggg atagagtccc
//
LOCUS       KCKM01000556             750 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8826apa ultra-conserved element locus
            uce-778, sequence.
ACCESSION   KCKM01000556
VERSION     KCKM01000556.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 750)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 750)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..750
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8826apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>750
                     /note="ultra-conserved element locus uce-778"
BASE COUNT          240 a          156 c          130 g          224 t
ORIGIN      
        1 aatcagcaga acttagaact tgtgaaaacc ttaactcttc gtgttagagc tgagaactta
       61 tcttcttcta tgcctgcata agtaaagtca gcaatatctg cagttcatcc tccgcaataa
      121 aaccagaaca aatggctttg ctattgcttt ttcttgctca ctggtttcca cgcaaaacag
      181 aaaaagatcg tgttaattag ttgcgtaaca tttggcatgc tagctctgag aaaaaaagcg
      241 caactttttc ttttaatttc tggacacctt ttgatgagcc acccagtact gactcagcgg
      301 tgctggacct tcacttgggg cccagaactc tgcagctgct ctagctctgc atttgcctgg
      361 agcaatgtgc cagctgtctc caactgtatt acaccacagt aacgcgaaca actggaagca
      421 ataatgtgtc tccccatttg cctaacaata ccaacatgaa caataattca gaagactgaa
      481 gatttgtgct gtaatttaat aaaccccatg cacatttcta caattgagta tcacatctgt
      541 gcaatggatc ctagaagtgt aatattcttt tataagggac cattaaccaa tcttaagttt
      601 ataggtttcc ttaaatcttt ttcatcagct gttaaactac agtaaagaga aaattgcctc
      661 ttatgagaca agggatagta aaatacaaag actgtgatta aacgtcaatc aattaaggat
      721 tataatataa taaaaatgct gactgatgat
//
LOCUS       KCKM01000557             736 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8841apa ultra-conserved element locus
            uce-5068, sequence.
ACCESSION   KCKM01000557
VERSION     KCKM01000557.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 736)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 736)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..736
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8841apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>736
                     /note="ultra-conserved element locus uce-5068"
BASE COUNT          185 a          164 c          143 g          244 t
ORIGIN      
        1 tagaaaccat cagtcaccaa aaagcagttt gtttttctga tgatggtaca gaaattagtt
       61 actgcctcct tctcttcagt acattgcaga gggcaatatg ctcacatcca tttagagacc
      121 ctcacttgct ttaccaacct cagtactgtt ttgtttcctt ttcatttttt ttatagagcc
      181 ttctgttttt cccagtttaa acacaattgt tctaaacact tttttttcag tactgttaag
      241 aggtaagtgc caggatttag catgtataac attgtctgag gcatttgttc agctgtctgt
      301 tgaatcccct gaaactaatg ctcagtctct attaatgcct cagtccctgg aaaccagagc
      361 ccattctctc ctctaattaa tcttgcaggt actgccttga cattattggt tcaccagcag
      421 agcagaactg cctcagccat caataataat tcaacacgtt aggatgaggc ctctatacac
      481 agcccacaga cgtggctgaa ttgtgtgcag gctccagtgt tcctcgctgg ctggggaagg
      541 aagaaagaaa cccactgcaa tcgaaactgt tctggttgct ggatagtttt gcaatgcaag
      601 agtcgtggtg ttactcatgc ttttgctttt ttctccaaac gtaggcactg tttggcacaa
      661 tgcttgtgat tgtctgttta ctgaatctta atactaaagc tgttacaaat tgtctttcac
      721 agatggtggg agcttc
//
LOCUS       KCKM01000558             894 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8855apa ultra-conserved element locus
            uce-7965, sequence.
ACCESSION   KCKM01000558
VERSION     KCKM01000558.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 894)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 894)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..894
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8855apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>894
                     /note="ultra-conserved element locus uce-7965"
BASE COUNT          272 a          211 c          142 g          269 t
ORIGIN      
        1 tgatattact tacagtttgc tcacttggct cctgtgtgtg tctcatacgt acccatccaa
       61 ctgtgtctgt gttctgtgct tttctgtttg tgaagtgtga tatgttatgt gtactggatt
      121 ttaacaatac aaaagagact tttttaatta aaaaagcctt cctacttact cactgcaaaa
      181 ctatcaacat gcatgggttt acatttgcat tacaattaac atggcttgtc ttttactagg
      241 gatgtaccac acgagtggct ttaaccagta cttcccatca gttctttgat ggctttaaac
      301 ttcatttgtt ttaatattgc agttgataca gatattcaaa atgcacataa ctgagccact
      361 cgtttatgca tataacatcc agagactatg gacttcagct gcctgcactg ccctaaccat
      421 atgctacatt tttcacaaag tattctctaa cacagtgttg cccttcacag gtgctacctc
      481 tgatgcctct ttccttttct ccccccagat ccgcgtcgtg aaggcattcc gtagctctct
      541 ctatgaaggt ttagaaaaac cagaatctag aacctctatt cacaacttta tgactcatcc
      601 tgaatttagg atagaagatt cccagcccca catcccactc attgatgaca cagacctaga
      661 agaagaccct gctctcaaga aaaactcgag tccaccgtct tcgctgaaca agaacaacag
      721 tgctatcgac agtggaataa atcttacaac tgatacaagt aaatcagcta cctcttctag
      781 tccaggaagc ccaatacata gcctggagac atcactttag ctgaaaaggt cacggcaaaa
      841 aaatattaaa gtaaaataaa acccacagca accgaaatat ataaatatat atta
//
LOCUS       KCKM01000559            1028 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8869apa ultra-conserved element locus
            uce-1311, sequence.
ACCESSION   KCKM01000559
VERSION     KCKM01000559.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1028)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1028)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1028
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8869apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1028
                     /note="ultra-conserved element locus uce-1311"
BASE COUNT          322 a          232 c          198 g          276 t
ORIGIN      
        1 ctcttgccct aaagcttgaa atgcgtaaat acgaatacca gctaataaac aataaacagt
       61 taaaaacaaa accaaaaaaa ggagacccca aacaaacctt atggtcatat cacttccacc
      121 agctggaagg aaatcaacac aaacaccgct ctcttgtcgc actaaatgca accgatgtac
      181 agcaaacaaa actgaattta gccaaagatg agggaaactc acacacaaac tctggatttt
      241 tgtatggagc tcatattcat atattttctg ttctgctgct tagcatccct cttctcctac
      301 cccagccaat taagacggac actatatttc tcccctccct tttcggtcag agaatcttgg
      361 cacaaccagc acaaacaaac tttgctaaca gctttaaact tggaagggcc gctttttaaa
      421 tatttgccgc tacataattg aaacagctgt tttaatgaga tacctactgt catcatttta
      481 ccctggctga gctgggtgac aacaaagcag taataacgaa ttcaataata attaactcgg
      541 gtcatctgct catctgtcat ggctcatcag ctttagggag aaaaatccca gtgaacttct
      601 ctcttttgtg agctttccaa aactctgcaa taaaatgctt agagaggact ctaggtagcc
      661 cttcaaaagt tctaagcaaa ctggtaagta ggttaattaa attttatgca tgtttaaatg
      721 ctaatgatta cattcctaac attacagtgt aatctgttat ggaatgatgt catgcaagca
      781 gtggttttta gtgcctaaac acatttccag cccgatgtgg agtggctctg gatcatttct
      841 cagagggcag gcagttgacg gtgctgtctg ggagcctggt cgcgcattga gctcctcacg
      901 ccggtggctg aacgttaagc ggggaagtta cggcaaagcc cctgctttga tgcctcctgc
      961 tgcaacacag ggggagctgc acaataaata aataaatata atatcagttc caggggaatc
     1021 aataagga
//
LOCUS       KCKM01000560            1102 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8885apa ultra-conserved element locus
            uce-3334, sequence.
ACCESSION   KCKM01000560
VERSION     KCKM01000560.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1102)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1102)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1102
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8885apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1102
                     /note="ultra-conserved element locus uce-3334"
BASE COUNT          298 a          242 c          202 g          360 t
ORIGIN      
        1 actgtctctt cattcaaagg ttaaagtgga ttcattgctg gcttggtcca tttgccaatt
       61 gctgacagct gtcaatatag ggatttgatt tctttatcca agcatcacaa acactacatt
      121 agtatcttca gagaaagatc ttgactgtga gctgcagttt cactgcccca actcaattac
      181 tgcattcttg aactgcaatg tattcatttg tgggcagtgg ggcagccagt gggagggtat
      241 tgattggagt ataatgtcat gtgtagcagc gagagtaaga tgaaaagtgt tttctgctta
      301 atgggttggt attaagtagg tgggaatggc ttctaattag ccaacaattg ctgtgtttct
      361 cagtttccct cctttccctc ctcctgtcgg tcaccagctg ccaatctctc tcgccttttc
      421 cctttttgtg tggagttcat tgctcactgc agtgaaagcc tttgtttaaa aaagagggct
      481 cccagggtct catctgccag ggtacagctt gctgcctgcg atgagtagca actgtcagtt
      541 tattttatct caaccttttc atcattctgc tgaaactggt cgagtgaaac cacctgagag
      601 acctgaggat tcagtaccta caagtcatta gccaggactg ctcagtctct ccccacacag
      661 caagtcaact gaacactgct taaaatatag tccactttaa ccctgtattt tcctatggac
      721 gtattagacc tcttcctaca tcttccagat tttagtttca tgatcattcc ttaaacatac
      781 tgcaactgtg attggtgggt aatatatttt ctagtgcttc tcaacacaaa tgctcaagca
      841 acactcttca gaaatacaaa atataatata ctaaaatcta tttattagaa tatcttcaat
      901 cagaaccttt ctcttaccta gattatgttc cccagcatga atgttcaacc tagtaattat
      961 tatgtgaacc tctgcttacc tcgaagtttt tgattatgca tctcagataa aagagacaaa
     1021 ctctgctcca ttacacttgt gtaatccaaa ttcacaagat ttcagggaca taacaaaaag
     1081 ctatatttgg tctgcaagtt tt
//
LOCUS       KCKM01000561            1116 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8901apa ultra-conserved element locus
            uce-2782, sequence.
ACCESSION   KCKM01000561
VERSION     KCKM01000561.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1116)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1116)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1116
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8901apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1116
                     /note="ultra-conserved element locus uce-2782"
BASE COUNT          335 a          183 c          235 g          363 t
ORIGIN      
        1 aaagggaaac atgcgttttt gaagtggctg tgtatagatc cttgataata ttctaggagg
       61 tacattaaag ctgctgcagt gtcctttttc agttaaatct atgtcatctc cttcaataat
      121 atctccctag tcttgacata cttcgtttta ttcatggtca aaggtgggtg ttatcaaggc
      181 aagacactgt taggcaggaa ttaacgtaat atacaagtaa agcttctttg ttttgtatgc
      241 tatctgttga cgttccctag gtaccaaaag aaaattacag agatagactt ctactgttat
      301 tgtctcagtg ataggtcata tatccaaaca aactgtatga ggaaggttat gttttggaat
      361 aacatcctgt gtttttgtgc ttaaccactt ttcactgatg gtctgaagtt gcattgtatt
      421 agcacaaagt attttacaga gttaattgat attccaggtt tggccagggg aaaatctaca
      481 gctccccaca acatgcttga caagttatta tatttacttt agtcaaagcc cgagtgtgca
      541 gtatccctct tggaggtggt ctattattgg agtcccatat gctttttgtt tgggaagaaa
      601 gcagtcactg tgtcatactg ttacacaggg tattcttttt caaggatgtt gttcccttgg
      661 ggaccatatc atgccagagt tcctaagtct aataagacct ttgtagctct tattgtgtta
      721 aagttctggg agggaagcaa gagttaaaca gaaaatgtaa ttctagcaac tatactagac
      781 cacatgttga aaaacatgac tgttaaagca gaaagtcaaa ggcttcaaaa agattcctgt
      841 tgtggtaatg taactttatg tttcttccca atgaatctag agtggaaaga cagagggtga
      901 tctttgcaga atgtctagtt ttacttgaca gtaattaaaa agatatcaag aattctatgt
      961 ccctgaaaat tatatcacaa ggcttcaaaa gaagtgttaa aaggttttaa cttgaaagga
     1021 attaggaagg ctgtgagggg tgtcccacca tcagagaatg ataaggtgca tagagagagg
     1081 gtcatttttt taaatggcag atcttacctc cctctc
//
LOCUS       KCKM01000562             459 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8915apa ultra-conserved element locus
            uce-18, sequence.
ACCESSION   KCKM01000562
VERSION     KCKM01000562.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 459)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 459)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8915apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>459
                     /note="ultra-conserved element locus uce-18"
BASE COUNT          120 a           91 c           86 g          162 t
ORIGIN      
        1 cttcacataa ttaaaagtca ttctgatttc tgcactgtgg tgtaattgct taaaaaaaca
       61 tgttatttga tgattaagat tctggagtga attgtgttct tttgggttct tgcactgttt
      121 ctccatcagg gacttggttt cagcggtgtg cagctgctgg agttgattta cagtgctgcg
      181 gctgtggcta gtcataaata aatcctctta tatagttgtt atgaacacct gttagatcat
      241 ctgtcagcaa agcgctgttc acatttatca tggtgcggta gttattttac ctcaatccat
      301 ttccaactga ctcggcctcc atcactggat tactattacc acaccataat cgctcgtttc
      361 cactccatgt tacaacttgc agataaaaga tttcactact tggccaaatt tcataaataa
      421 aggagcagtt cagtgcagta aaagtttatt tttgtcatc
//
LOCUS       KCKM01000563             286 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8929apa ultra-conserved element locus
            uce-645, sequence.
ACCESSION   KCKM01000563
VERSION     KCKM01000563.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 286)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 286)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8929apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>286
                     /note="ultra-conserved element locus uce-645"
BASE COUNT          102 a           59 c           44 g           81 t
ORIGIN      
        1 tgaaggaata agagatgcta tctgccacaa ggattaccac tctacacgcg gatcaaagac
       61 aattccacat tttaccctag tgattagctg taattaaata aagtaagtct gtttaaactt
      121 cattagcagc aagacgtttg ctacagcaga gtgggcacaa atcatccatt cttaattaaa
      181 agataatcca caggatgacc ataatcttct tctaaaaata caccatttcc ccctgaaaga
      241 tttcttcatc aaataaggat aaataacagt ttctctgtgg ttaagc
//
LOCUS       KCKM01000564            1023 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8943apa ultra-conserved element locus
            uce-6500, sequence.
ACCESSION   KCKM01000564
VERSION     KCKM01000564.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1023)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1023)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1023
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8943apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1023
                     /note="ultra-conserved element locus uce-6500"
BASE COUNT          268 a          242 c          200 g          313 t
ORIGIN      
        1 aactgccttt gactgtctca gtaagacatt gaaacagacc ttctgctcta aattaataag
       61 gccaatcaga gccacacaaa gcccagaatg accgatcatt cttctggtgt cctcgctatc
      121 tttactgagg tcagataaat cactttcaag ctgttaaatc aatgatcata aattagggct
      181 ctgtttttac agcgccttgt gggaaattct catggttaaa ttaatctaac agctgtagtg
      241 aagagcacct cccacaagat catgtcaaaa gttctccccc caccccccac ttcttttttt
      301 ttttttttaa aggggaaaaa ggaccaaatt atttgttttt acctagcgca caaaatagaa
      361 tccctccttc tatccctgct aattcgtgtt tcaattgtac ccagctgttt aaattgcact
      421 gtgcagagat tgccttgatc cccaggtgct ggtactccat ctgtgctgct ctgagagact
      481 atttacagca gaggttaggc cagcgattgc tgggatggaa aactcatttc tcagcctggc
      541 ttttatttac actcttatta aagatccttt cactcatgtt ggaatggcag ctagtggctg
      601 cagcgagcgt ttggcaccga gccaagcagc aaaattacca tgtcgatgaa agatagcctg
      661 cttccatttt aacctttcgc tgttctccct gttccatcta tatttgcatg aagaaggatg
      721 attattgaaa gagatagggg gacaaaggga tgagagaatc cttgtcagct gagcttttcg
      781 agggattaaa ccaatggttt gtgaccaatt tggtaaaatc tttactgcct tattaatttc
      841 ctactctttc cccttaattg ctgttagagt ttatttgcac gtgaagcaac agagctgctc
      901 gcatccttcc cctgctgctt cgctgtgcct tgcgaacacg accctgggat atgtctgcaa
      961 tgttgaggtt tctacttcat ccctgatgca ggtcacacaa agccacagca acactctcaa
     1021 agc
//
LOCUS       KCKM01000565             823 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8959apa ultra-conserved element locus
            uce-7751, sequence.
ACCESSION   KCKM01000565
VERSION     KCKM01000565.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 823)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 823)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..823
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8959apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>823
                     /note="ultra-conserved element locus uce-7751"
BASE COUNT          249 a          163 c          157 g          254 t
ORIGIN      
        1 aaggcaaaat ctagccttgc attgctgtaa ccgggagcag aaattcaacc tgacattttt
       61 aagacttttt aaaacatttt gcaaaatatc tttacccgat actaaactta gccctttttg
      121 acatacagtt ggaccgggaa gaaagaataa tgatgcacat ttaaaaaatg tggctgtagt
      181 actgctctgg gatttttgtc tgatgcttca gtactgcaga aatggtgatg gggttattta
      241 cgttaattca tttggcttgt tgaaaaaaat gtgcccacac tcctctactt aatgggattc
      301 tttcctcgtt gcagtgcaaa cggctggagc aggagcttca tcatctgaaa gagcagaacc
      361 agacttcagc aaacaacacg agacatctga ctgctgaaaa caatcaggaa cgtgctctga
      421 aggtaaatct ccatttcttc ttgcaggcaa attaaggttg taagcccctg gtgccagctt
      481 tctgggctgc atatatcagt tgtgtacatt tcggcagaag agagctatgg tgtttgccaa
      541 caaccccttc tttaaacaca gatacagcac ccttctgtta tggttttatt ttattttgtg
      601 tatgaaaaca acgagaaaaa aagaacacat cccccaaatt cttgggttga taattaacac
      661 taaattttgg gggtctgtcc tcacaatatt acattttata atgtgaagaa aactgcaact
      721 attttcctca cggtaccttt acaaaactaa tattttaaag catggctgtt tgatctgctc
      781 ccagcagtgt gtgctatatt aataacattg ttgacctata cta
//
LOCUS       KCKM01000566             864 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8975apa ultra-conserved element locus
            uce-976, sequence.
ACCESSION   KCKM01000566
VERSION     KCKM01000566.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 864)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 864)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..864
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8975apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>864
                     /note="ultra-conserved element locus uce-976"
BASE COUNT          243 a          138 c          161 g          322 t
ORIGIN      
        1 gaaaaaaaaa ataatttgca gtctttgcat ggccatgagc taagaaatag attttgcact
       61 gagcgtgtgt tttgtacgct tttcctgtgg tttcttttcg taattcatag ccaccatttt
      121 tataggagag ggagcagatg tatgacagtt ggcagtttct gtagaaagtc tttatttgtt
      181 attttctcta ttgcatttgt ttaatcacag aaaacttgca tattttgaat gattatttgt
      241 attttagtat tttagcaaga gaacaggtga cttttccagc ctcagtgtat taaaagctta
      301 gtcaggtgta tgttatatct ggttcccttc cagttttaaa aatgtataaa ttctcttttt
      361 aatgttccag gggaaagcag tggtatttgc tccactccga gggaatactt taaaccagtt
      421 ctgcaatcta gctgaaaaag ctggtttctc tatccaaaga catgaaaatt atgatgaaca
      481 catttcgaac ttccactcca aggttagttt tctgcttgtg ttagataaca ctttaatccg
      541 cattgcattt tgaagagatc atggtccttt tggcaggtaa cctaaatgtt tgattaaagt
      601 actccttagg tgtgctgttt ctgaacagct atttttgtat ctgattattt tgtgtggtag
      661 aaccatcctt tatctctgca agtctagaag agttttgcag aagcatctcc tgtttaccct
      721 tttcattcat agaaatctaa tttatgagag tcttttcttg ttgttgttag ctgcctataa
      781 atgtacgaca cacgagcatt tacattttaa tgaaaagctt gcaactttta agtaggttaa
      841 atactgaaat ggactgaaat aaat
//
LOCUS       KCKM01000567             622 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 8991apa ultra-conserved element locus
            uce-225, sequence.
ACCESSION   KCKM01000567
VERSION     KCKM01000567.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 622)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 622)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8991apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>622
                     /note="ultra-conserved element locus uce-225"
BASE COUNT          245 a          117 c           94 g          166 t
ORIGIN      
        1 gaggcggacg gacggacaaa ctgcttcaaa acaggactct ccactttctc tgaatactgg
       61 catctcccaa aaaagagagc tttcagaggt aattaaattt tactatttta tttgtgaaaa
      121 aactacaagc agaattcata aatagacatt tctatttaaa gcaggaaaat gataaagtgg
      181 cttctaataa cagtcgtgca catgccagta acaggaatat attaacatct tttatttgct
      241 agacaaagag cagtgtccaa tataaatttc ccaaaaacat ttaagacctg tgaatttctg
      301 accagttcac aaaaccacca ttgacacttt agcatgaaga ttaaaacaaa cctaacagga
      361 ctgtcagctc taaagacttt acagagcgga gaaactttca aaagcgttat acaagctgtc
      421 tttctgggca aatgaaaaat atagctcgta taatacatta acataaaaat ccacaagata
      481 agattatgtt ttgacatact taaacaagca ttctatattt gtctccaaca aacaaagcta
      541 aggaaataat gtaaccatct ttacacagta aattaaggtt acaagtcata cacaagaaca
      601 gaactgcttg cgcattaaaa ac
//
LOCUS       KCKM01000568             385 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9007apa ultra-conserved element locus
            uce-3306, sequence.
ACCESSION   KCKM01000568
VERSION     KCKM01000568.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 385)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 385)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9007apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>385
                     /note="ultra-conserved element locus uce-3306"
BASE COUNT           86 a           87 c           89 g          123 t
ORIGIN      
        1 ctggcgcagg ggggtggcgg ggggctccca ggagcagatc gtgtttatcc cttcaccaca
       61 aggcacacaa cctgctgagc agacaggtgc tggcaatgct gatgtccatg ggcgatgaag
      121 cctggttgtc ctagaagctg acatctatat ctagatctat ctggattttt aaactgatac
      181 aacatgaaga atgtcactct ctgttactgt atatgtgtat cttatggata tcctttaagc
      241 acaatgcctt gaccatgtct gccctgcttt cttcagctga cggattttgc cattgtagtg
      301 ggctattgtt ttccacagtt ttttttaatt tatccttcag ttcaaatgct tctggacatg
      361 gtacagctag actctttctc cagta
//
LOCUS       KCKM01000569            1150 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9023apa ultra-conserved element locus
            uce-3777, sequence.
ACCESSION   KCKM01000569
VERSION     KCKM01000569.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1150)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1150)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1150
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9023apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1150
                     /note="ultra-conserved element locus uce-3777"
BASE COUNT          279 a          257 c          245 g          369 t
ORIGIN      
        1 gtaaggaaat tgtatgtatg cttaggtagc tccttagact gtaaatgatt taccaggatg
       61 gtttcaggct atttcattta gtgttatcgg tttgagaaga gattgctaaa atacatcttt
      121 gctttactga aactctgcaa aattctaaag atgtttgtga gcattaggat gcaggagaaa
      181 tgcttacctt gagtaattta ggacaaatca cccatggtac gaggttagtt tgtcatgtac
      241 atctatgctc atctgcagtt gccattgctt aagtcagcca gcaaagcacc tttacaaatt
      301 aagcctgttc cttgagaata aacagttttt ttttgagaga ttcatgtatc ttaaagaaaa
      361 ggcagaattt atcttctgca caggcgctaa tgcatttgct actgtgccag ctttcttttc
      421 tactaaagac ttctgcttca ctttatcatg ctctctataa catttcattc ctagacttca
      481 gagaccaggc tgattaaaga aaaatgcctt gcatggtttg tatttgcaca taatagattt
      541 gcttgtgtca caccaaacat cattatgccc atctttctta gttgcttctc tgctggttct
      601 gcagggtcat ccccaacatc atcccagaat gccacgctgc cttcatcgag tgcctggccg
      661 cttagtgcct ccggctacag tagctctttc agcagcattg catccgcacc tagcattgca
      721 ggtacgaaac aaatggcctt tctactctca ccccgctctg cattctcaga aaaggccctg
      781 gaaagtgctt tcccagttgt tactgctgta gacagaagtg tgtttttccg tccagggctg
      841 ggtaggcagc tctcctggca gctctttggt gctgagcgtc gggtgcatgc ctggatttgc
      901 actgagtaaa agtgtcttta ttccgtgctg tgccatgtgc tgtcgctctc tgttgacatt
      961 gagatctctt aatgactgtt tccattgcaa ctttgagaat gttgtctagg acctcagaaa
     1021 cgcccccact aagagctgat gtggaatttt tgttgataaa ctcactgtta aaagtgaacc
     1081 atcgtcagca gcacctcaag tctgcatggc tctcgagggt tgggcctggg gctcttaaat
     1141 gtctttcagt
//
LOCUS       KCKM01000570             307 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9038apa ultra-conserved element locus
            uce-7712, sequence.
ACCESSION   KCKM01000570
VERSION     KCKM01000570.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 307)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 307)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9038apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>307
                     /note="ultra-conserved element locus uce-7712"
BASE COUNT          108 a           49 c           41 g          109 t
ORIGIN      
        1 ccacaatatt aaacatgtta gtttagaaac agaagaatcc ctctctttga gactaacaaa
       61 gtagtcaaat gcagaagaag ctattcaaaa ttgtctttta ataaaagttg aaagtcttca
      121 aaatatattt gcccctcgag caaacttttt tcatttaata ttgtgtctgt taattagtgc
      181 ttcaaatttg caaattcttt attggtttat atcaatgtaa tacccaaagc tcatctcatt
      241 gccagatttg aatgaaatat gatcctgttt attctattaa aatgaaggct tgaaattgtt
      301 acccaaa
//
LOCUS       KCKM01000571            1100 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9053apa ultra-conserved element locus
            uce-3024, sequence.
ACCESSION   KCKM01000571
VERSION     KCKM01000571.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1100)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1100)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1100
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9053apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1100
                     /note="ultra-conserved element locus uce-3024"
BASE COUNT          346 a          208 c          198 g          348 t
ORIGIN      
        1 aaattctagt taccaaaaaa ttatgtagta tcacttacca tactgtaggt ctaatcctat
       61 tggctttatt aggagtagaa atggttacaa gatggcaaaa tccctccttt ttgtgttgaa
      121 taaacatagc tacacattta aaattggtat tatgtccttg acatgaacaa tttaaaacct
      181 tctaccaatc tgacatattt tgctcatgca tatcatgttc attttctgta aatattactg
      241 cttccagcaa aatcttattc tactccaata aataacacaa aaaaataaag caatttatga
      301 taaccaaaat aattaaatag tagaagcagg ttaaagatca gcattcattt ttcaaattaa
      361 atttaaaagt ctgcagtagt tacttagaag attggcaagt tttacaaata acatcaccaa
      421 gccttttaga gagaaacaca gttgcattag aatggagtca ttaggcaata catttatttt
      481 gaagccaatt aaccttttgt cagtgaaatg ttggagctgt aatggtttca gcagtggagg
      541 tcagcctgta acagaggcac gtatgacagc gattacgctg tctgacatat gctgtagact
      601 gagagtacag ctgtggaatg agaatctgcc ttcgtttgta ttctgctctg cattttcagg
      661 gagcaggcaa tcttgaccta tccatttagg taattaaagc ttctatttgg aagtgtcctg
      721 caggaaggtg aaatttgggg gagataaatg gctgctgctc actatatcca gccacttcca
      781 tcatttgatg gactgcctga aacagcctgc attgccaggt cctcataaaa atagagatga
      841 attgggcagg agacaattct ctaaggcaaa gcaactctgt catcttcctt tttccagcat
      901 ataatttaat tgttagccaa ggtagacagc tgactcaggg gcctttctct aatggctcgc
      961 ccaccatttt ccatttacta agaaattatt tcactttact tacttatgag ctaactttgt
     1021 ttgacaataa gagatgtcac ttcaataagc tcagctggtt gtcacagctg ttccacaact
     1081 taccttccag gcaattcggt
//
LOCUS       KCKM01000572             602 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9069apa ultra-conserved element locus
            uce-3398, sequence.
ACCESSION   KCKM01000572
VERSION     KCKM01000572.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 602)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 602)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..602
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9069apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>602
                     /note="ultra-conserved element locus uce-3398"
BASE COUNT          157 a          128 c          122 g          195 t
ORIGIN      
        1 cgtggcgtag gcgcgtcgct gacggccacc agccacgtcc tgggcttgct gcatcctcca
       61 gcctgcacat gaggtgccgc ttggtgttct aacctgcgct ttctttcctt ctttcagagg
      121 ataaaagcgg tggctgcccc caaggaagtg aatcgatggt ccaaagaaac agagagtggc
      181 accccattct gccccaatgg aacttcgaat ggcggattga tcaagccaac tcatatcatt
      241 gtggaaacca tgatgtgagc tctctctgtg agaggattaa acctgcttta actgccgttt
      301 actaaccata gattctcata ggaccaggtt tacagagctt tatatttgca ctaggattta
      361 tttttatttc tcacagagaa agttattttt tgtgtgtgtt ttttttttaa tattttgtaa
      421 ggtaatcaca gcagatgtct ctctgtagag ggagagcttt catatcagac tagacatatt
      481 acaggaattt actactattg ggttttttta aatatatata tctttatctc taaatattat
      541 acaccttacc acttgaattg attgtcttac cagcaataca ttcaagtctc agaaagcaat
      601 tt
//
LOCUS       KCKM01000573             919 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9085apa ultra-conserved element locus
            uce-5427, sequence.
ACCESSION   KCKM01000573
VERSION     KCKM01000573.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 919)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 919)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..919
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9085apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>919
                     /note="ultra-conserved element locus uce-5427"
BASE COUNT          298 a          225 c          175 g          221 t
ORIGIN      
        1 tgagatagtg cttcctgatc tgaggcaaac aaaaaatgat tacagaaaag aaagtttgta
       61 gttgcacctc tggatgacat cttaaagact gtggcatatt ttttgaaaca caattccaat
      121 tttgtgagct gaccgattgg gcccacaaaa cctattgttc accctcagca acaactgctt
      181 ccaagaaaca acacccgagc cccttccccc caaaccaggc caaaaccccc cggcagacca
      241 gtaaatggat ggagccttga cttttgtgcc tctacgtggc agtcagacac ttttattgca
      301 aaatgccgtc tggaaaagat gcaaaacaaa attgctaaac tgcaaaaaaa agaagaaaag
      361 gaagagagaa caaaaggccc ccttcccttt gcttattgag ttcaaaggca taacatgcag
      421 caccctgcag caaatgggaa gctacactaa ttttaaagcc ataaaacgct ataaagtgcc
      481 ctgcggggca ggactacact gaagctagtt gcacctaaat aagacatggt tcatttactt
      541 cgcagcttag cctaatgtaa tcatcagcgg atttctagcc tagagttgta acaggcaaat
      601 agccgatact gcggaggcga cactcccagc cattgagggg cctcagctag attgctgttg
      661 attagaaaat ttttcagttt tgacaagcac ttaatgaaca taaatcgctc cttgattggt
      721 tttccatttg gggccacagg cacacctaag aagaaacaaa agtctccaac tcttctttcc
      781 cagaaaagac ctcagcgtca aacctaccat caggttacga gccacagtgg aatatattca
      841 tcaaatgttc ccgttaaatt agccatcctc ccctctcgca tataaatacg ggcataatac
      901 catccggctt cataatata
//
LOCUS       KCKM01000574             804 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9101apa ultra-conserved element locus
            uce-6780, sequence.
ACCESSION   KCKM01000574
VERSION     KCKM01000574.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 804)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 804)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..804
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9101apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>804
                     /note="ultra-conserved element locus uce-6780"
BASE COUNT          258 a          131 c          164 g          251 t
ORIGIN      
        1 aaaataaatg gttctctgcg ttaggcactg tcccccttca gtagtaaaag ttgcccctgg
       61 gtgatgggtt atgctagcag aaaaggattt gaaccttcag atgcctgtgt tgtgccctgc
      121 cagagcctgc gtgctcgaag acctgttatt tctccccgag cctgacttca attaatgtac
      181 ttttaaaatg attaaacata tcatgctgtg acttctaaaa tgtcaacaag cttctaaact
      241 tgggagacag gaatgtaata aaataggtaa taggagattc aatagttaat agaggccctg
      301 aagtgtgagt gtatacagta gctgtatatt gaaaactgtg caaatgaaga tggcttggta
      361 ttgcaaactg aggaagaaaa ttgtttttaa ttagcacctt cataagaact gctgattaat
      421 actgtttggt ttggtgaaaa gctttcagct gagtaatttg tacagccatt ataacagttt
      481 tgttagacca ggactcctgt tgttaaacac aaacagcaga tgataatggt ggaagatgag
      541 tttgtcatgt aacaatttac cttattgaaa aaagctttat ataaaaccca atacagtagg
      601 taccagcaga aatcacatat tttaaatcct ttcaagattg cagtgtgcga tgctagtgtg
      661 ttttttcatg gactagaaac agattttata tcatttataa aattatatat acaatttaaa
      721 ggtgttgtag catggacaga ccacttcact ggtagtgctt tacatcagga cagtaaagtg
      781 ctggtatatt caaacacttc ctaa
//
LOCUS       KCKM01000575             594 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9117apa ultra-conserved element locus
            uce-6069, sequence.
ACCESSION   KCKM01000575
VERSION     KCKM01000575.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 594)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 594)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9117apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>594
                     /note="ultra-conserved element locus uce-6069"
BASE COUNT          165 a          116 c          145 g          168 t
ORIGIN      
        1 acgcttttct tcaggggagt aataaaaagg agcaaggagc agcgagtggg aagcacgtac
       61 atgtccgtgt acacatggat gtgtgtgtat aagcaatgtg tgtgtctaca cacacagaca
      121 aaatcctgca tctgaagatc catctttgct aaggtctgct acttgttaaa tcagtaagaa
      181 tatctgtcag agatatcctg ctacaccatt tggctgatgt caaacctaaa caaaccagat
      241 cagaaaacca gcaagtggca gaacataaat gaaacgggag aagaccagtc taactgtaac
      301 tcgcatggtt tgcttgctga tttttttggg gagggggtga ggagggaaat agtggcaatc
      361 accacagtca tttgcagtac taatgtccaa ttcagcctcc tttcattctc ctgatttagg
      421 tggtcagagt ggtttcgtag ccgacacggg gaagctgtgc tgtttagcag gctgtttaat
      481 gggaaactgg cagtcttatt tcttttctag atttggtttg tcactaggtc tccattacat
      541 gccactcagc tttgatgtct ttggacagga ctgatcaaaa gatgtcattt gacc
//
LOCUS       KCKM01000576             968 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9133apa ultra-conserved element locus
            uce-7314, sequence.
ACCESSION   KCKM01000576
VERSION     KCKM01000576.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 968)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 968)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..968
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9133apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>968
                     /note="ultra-conserved element locus uce-7314"
BASE COUNT          315 a          230 c          159 g          264 t
ORIGIN      
        1 aggacccttg caacccctat gattctacta taaaaagagg gaaatcacca agaaagagag
       61 ccagtctaaa attaaatatg cactgttttc tcatagttca cagcagaata aacatattaa
      121 gacttaatat gacttaatca tggcatatga acaatcttac cagcacaata caacccacac
      181 tgaaggggca gtggcaagca gctgttttcc ctattttcag aaggctacta aacatcactg
      241 aggtgtaccg caggttgctt tttcctgctc taatgacatg aaagctgccc attatctcac
      301 ccaccggtac catctcagtt acctcattgc agagctcaca ctctgctccc agaggagagc
      361 aagtgctgcc aagagacttc cattgcaatt tccaaagtca catcaaacgg acaaaacatc
      421 acaacgcatt cagcgccccc tcattcaaac agaaaaaact ttaagtttcc actgtaatta
      481 accctatcct cgttaagata attatgatca agctccctgt cacagctaat atcacaacat
      541 cattgcctat ggctcaggct ttgccctcat tagcttacaa aaacactgcg ctaaacagga
      601 aactgattcc ctctgcaaaa cgacttaaga tgttctgtaa gcagacagta aataatcctt
      661 tagaatataa aggtctcaga aatgtcattt tatccaagtc ctttggctaa tcagtatgat
      721 ttcttccagc tttcttctcc ataattcatt catggtttct aacaaagttt taatcacaaa
      781 ggaatgtcac agcagagacc ctcgatgcgt atgcatggca attgtcaact acactatttt
      841 atgtggtccc tctggcctga tggggatttg gttgcaatga aagtaaaaag cagctcttct
      901 tttcgataat atttgacaat gacaacacaa cattttataa ataaagcaga agcctctgga
      961 gtaacgga
//
LOCUS       KCKM01000577             252 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9149apa ultra-conserved element locus
            uce-7789, sequence.
ACCESSION   KCKM01000577
VERSION     KCKM01000577.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 252)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 252)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9149apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>252
                     /note="ultra-conserved element locus uce-7789"
BASE COUNT           84 a           59 c           40 g           69 t
ORIGIN      
        1 attaaacccc ttagctagat tcttagacac atcactgctt aaaatgcagt cacctgacaa
       61 aaacagttct aattattacc cccttgggct aacatttttc agagtgactg gctaaaatgc
      121 actccagctc ataatttcta tctctgacag tggaagacat aacctagttt cctctaatgc
      181 aaaagtctct aatctagagg gcaagaccct gttccgtata acactgaaag gagaaaatgc
      241 aatttgagca ca
//
LOCUS       KCKM01000578             972 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9164apa ultra-conserved element locus
            uce-958, sequence.
ACCESSION   KCKM01000578
VERSION     KCKM01000578.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 972)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 972)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..972
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9164apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>972
                     /note="ultra-conserved element locus uce-958"
BASE COUNT          301 a          182 c          182 g          307 t
ORIGIN      
        1 ttttgtgtct gctttggctt aacactgagg ttaaaaaaat tgacagcatt ttgaggctgg
       61 ctatgacatt ccatcctcca tgatttcctc cttcaggaaa agaaggcatg tctccatcca
      121 gcgtgtgtgt gcctgccagt aatatgatca cggtaatgag aaaggttttt aagtaaataa
      181 tccatgcggc tttgataagt aaacaacaaa taagctggtg agaaactcct ttgactttca
      241 ggaaaggtga gatgttatag gttcattaat atgtaaaggg tagtatgtag atctcaatga
      301 aagtgacaaa caagtgccac agtgggtatt gctgaacaca ggaaatggtt ggtttgagct
      361 aatatatact tttggcacta cttcatctta aaatcataca tagcatctag caccagcagg
      421 ttggttttat agcttcatct attactttac tgtcactgtt aattgtcttc ttttacctct
      481 gcagtattct acaaattggg cctatccaaa gtgacaggag gaagaacatt aagcatctga
      541 caagatgata tctaagttca atttcctact ctttacctga tttatacctg cagaagataa
      601 ttttcctttc tgtcataaac agccctataa atcagcagtg cttatggaac aactgcatag
      661 agagccccca gctttgtatc ctctgtgttt cctattagga agccattact gcagaatttt
      721 cctccttcaa acaaaaatga tgaaatttaa taccactgag attacaaaga ttaagagctg
      781 aagtactgct ggggcttttc aattgaagca gctatctgag caatctttgc aaaactcaat
      841 aaaaacaggg tttctgcctt tgacatcatt atccatctgt ttggatgaaa ttgctgtatc
      901 atggtataaa tctgtgatac aagtgacata acctctgaaa taaaagggaa cattaactgc
      961 tctatcttct ag
//
LOCUS       KCKM01000579             569 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9180apa ultra-conserved element locus
            uce-7077, sequence.
ACCESSION   KCKM01000579
VERSION     KCKM01000579.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 569)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 569)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9180apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>569
                     /note="ultra-conserved element locus uce-7077"
BASE COUNT          179 a          139 c          112 g          139 t
ORIGIN      
        1 tctcttgatc tttgtatcca agttctcaag gcctctccat cacaaaaata ctccaaaggt
       61 cttacactgt aaattctatc agtagtttat taataccctc acaacacagt aacaaatgct
      121 cagccatgga aggggagtga ggaagctaca gagtagtaac aaactcagca acctcatctc
      181 tctctctctc tcagatccca ttataaacta acacaatatt tttctccaat tttcagtcgg
      241 tattgcagtt cacagcagaa aagatactga aagcagcagg agccaggcag gggtgtcaga
      301 cttcagagcg gacactgcct tgggacctga gggggccagt aaatcagtgc acgcttgtca
      361 acagctccaa gctgcaggaa ttactcaagc gaaaataaca aatggctgtc attgtggagc
      421 caaaaacctg tgattataat tatcacatcc ccagtgacct tgcataaact ttaatccctc
      481 tccaatggag catttaaata gcctgcatct actggcaggg gaccgtgtcc ccttagttga
      541 aaatacagag actaggagag aaacgagcc
//
LOCUS       KCKM01000580             661 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9195apa ultra-conserved element locus
            uce-1749, sequence.
ACCESSION   KCKM01000580
VERSION     KCKM01000580.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 661)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 661)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..661
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9195apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>661
                     /note="ultra-conserved element locus uce-1749"
BASE COUNT          208 a           99 c          117 g          237 t
ORIGIN      
        1 gcttttctat atgtgctgaa ttatagtata tattttaata gaaaactaat gcctctttta
       61 aaaaatgaat ttgcctgtgg aaatttttta gtacatctcc gaggtatcaa tttaataact
      121 atcaaagtag ctagtgcagt tgttgcattt aaattgattt acatgtcaag actggcagtt
      181 tagcagctgc gctattattc ctggatcggt caatttactt gagaaaaacc tactactgag
      241 ttctactgac ctgcatgaca atataggccc tatttctatt cctgtaatta ggcctgcgac
      301 taactcagaa tatttttaat taaaatattt tggtcaatgt gttgcaccaa attaggcctt
      361 tcagtgcaga tttaattctg gaagcactgt gattagaatg tgtaatgagt tgtgttcaat
      421 ttcagattaa caggttgtgc atcttgaaca tacaggtttt tgagtttact gtggagattt
      481 ttttttaaaa ctttactcag agcagttaac aaatagaaaa atctggtttg catgtctgtg
      541 gtttattttt aaatcgatga taacatactg taaataaaag cccccagacg tactaagata
      601 tttagacatt tatgtgaaga aaaaccgaca agttatcata aaatggtttc tgtacagtca
      661 g
//
LOCUS       KCKM01000581             566 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9211apa ultra-conserved element locus
            uce-6668, sequence.
ACCESSION   KCKM01000581
VERSION     KCKM01000581.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 566)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 566)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..566
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9211apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>566
                     /note="ultra-conserved element locus uce-6668"
BASE COUNT          180 a          108 c          122 g          156 t
ORIGIN      
        1 aaaagtgtta agtaaaaagt caaaacttac atgggaactg ttacattttc tctgtgtggc
       61 cataatgagg ttatttatgg tacatgtagg aaagattaaa ggttttcata ataaaggaaa
      121 gcaagagctc aagaattggg tgtctcctaa cagcactgac tctcaagatg ggataaatca
      181 cccgagcaac cattaaaact tcaagaagat tgcttgtaaa cctccaagca acgccaataa
      241 agcatattcc ttgccatata gcagtccata tggtggagct cagcagtttt tcaaaactga
      301 gggctattca caatttaacc ctactgtctt tttccttaga gggcacagtg ccaatgaacc
      361 actatcaaat caatgcaatc tgtaagtgtg ggagggtgga gaacatgggg agcagactca
      421 ggagaagtta tcttacccag ctgtgagctt ctcaagagca tggagtaggg ttggattcct
      481 gcacttaaag aactcagagc catttttcat tgtgaggctt ctggggtgtc tctcatcata
      541 acccaatgtt aaagacacat ttttat
//
LOCUS       KCKM01000582             491 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9227apa ultra-conserved element locus
            uce-7668, sequence.
ACCESSION   KCKM01000582
VERSION     KCKM01000582.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 491)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 491)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9227apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>491
                     /note="ultra-conserved element locus uce-7668"
BASE COUNT          147 a          116 c          139 g           89 t
ORIGIN      
        1 cctgcagcaa catccaccaa gggctcacgc agggacagat cccatcccca tgaatttaca
       61 gaaggagatc gagaagaaac caccccctga gggccaagaa aggggcagaa caaccgcaag
      121 ggctttgtca aattggaaaa atatatttaa ctgtgtgtga agtaattaca gcatgtaacg
      181 tagggaaaaa atagctccca ttctccccca gccgctgagc cagccgctgc atatttatgg
      241 ccccagcaga gagagcgggg aagagaaata acagctagga aaatattaag aggagagcta
      301 agctgctccc ccggcagagc tgcaaaggca gaatataaag caggctgcgt ttagcgaggc
      361 caggagagtc tataatttcc ctaagtcaat gcagggaaag agcagcactt tgccgagctg
      421 ggtggtggat tactgttatc ggcgcttgca gggcgctttc cctgcaggga tggggacagg
      481 ctgctgccag g
//
LOCUS       KCKM01000583            1120 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9243apa ultra-conserved element locus
            uce-7135, sequence.
ACCESSION   KCKM01000583
VERSION     KCKM01000583.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1120)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1120)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1120
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9243apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1120
                     /note="ultra-conserved element locus uce-7135"
BASE COUNT          382 a          218 c          200 g          320 t
ORIGIN      
        1 ctgtccttac ttaaaagagc agaagatgtt attcctctcc atttattaaa tgattcaaca
       61 ttgcggtatg tctgcaacta attagtatga tcaacacagt gcagggcagg aacaaaagca
      121 gaccagcctc tgagatgtgc tgatgtaaaa gcacacagga gtatacattc ttaaaccttg
      181 tcctataatt tataaccatt acatgctaac tgttccttga tggaactttc atttgtaaga
      241 ctgaatttaa tgtcatttct gattaggcct gtttctggat attaaaactg accaccaggt
      301 ttattcctta ctagcagtta aataacttac tttgtttaag attgtcttat accaaacatt
      361 atagaaacta gaaggtcagg tactgacaag taaaaatgtt acagatgcac gccaaaagaa
      421 catatatgta tggcaaaaga gagtatattt gctaagtcat atacttacca ttagcactgc
      481 aaagttactg aagtgtgtac tctgaatggt ggttatattg cctgcagaac taattatgtg
      541 gcacccttct ccccaccagc ctccatgtcc atctagaagg tcaaaatccc agaaggctgc
      601 aatggggtct acaccccgtg caaagtgcct caatcctata gtaagagggc tggtgaggtt
      661 tccaaaagtg cacccatctg caaaagcaac aaactgaatc agagagatgg agtggaaaac
      721 ccctttttga tgaatgctgt gtaaaaagag cagctacact gaactatagg gaaaaagcag
      781 tcgacataca ctcttaatgg tcaaacaaaa aggtagtgct cacattcaga aaagtttgca
      841 atagtataaa tcaatctaaa catttcagtc ccacaatgtg tccaaatgat ctaatcatgc
      901 ttcgcaaagc agattttttt ttgtttcaga ttcttcagtt acgaccagtg ttaccctatt
      961 gcccatgtaa ctgcagaaac agctcagttt cacggtatga ttaatagctg agacaattct
     1021 gcactttgaa agtcacattt taaaaatatt agtagaaatg acagcactat tcagtatcaa
     1081 ataaaactaa taaaattgcc taggcaaatc aaaataatga
//
LOCUS       KCKM01000584             984 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9259apa ultra-conserved element locus
            uce-1817, sequence.
ACCESSION   KCKM01000584
VERSION     KCKM01000584.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 984)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 984)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..984
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9259apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>984
                     /note="ultra-conserved element locus uce-1817"
BASE COUNT          257 a          236 c          243 g          248 t
ORIGIN      
        1 ttgtgcaggc aggttctcat ttcgttagtc ttgtgccgca catgcgtcag ctgagtttgg
       61 gctctcagtc acaccagaaa taagtcagtg tgggtcgaag atttacactg gagacctccc
      121 aaagctaagc caggattttt gaatctttac tgtcccattt tgctgtctgt cttgtgcggt
      181 gatatgtgga ggaccacata aagactgaag attaaaaaaa aaagttacca tttcgctgta
      241 caaataaatc tggagcaaag gcagcgttgc tctgcgagat gaggggttgg ggcggcgcag
      301 gggcgagtcc tacgtcgccg cgcgacccct ctgccagaga agcgagggga ggagaggctg
      361 ccctcccggc ctcgccagcg cgctgcatta atagaacata agtgctcgcg caatggcacc
      421 ggatccgtgg cagctgtttg ttcaatgttt catgctttta gccacatctg ctccaaatga
      481 gtgttaatat tgcagtggca tccactaagg atgggctctg tcagctctgc taagcatcag
      541 gctgaccccg gtgagaacga aagagcagtt catcccacgg tgctcgctct ccctgcgccc
      601 ccctgatctg cctcgcctgg ctccgctcca tcagaacgcc ttcgtccccg ctccctcccc
      661 acccaggcgg gggggaagaa aagggaaaac taagacagcg gttctcaagg agaaaaattg
      721 catttatttc tagcaccctg tccggcaatg tcagataaca gtttattcat cccctggccc
      781 ctgtatgaca ttgaagcata tcaacagtga caaaagtata ttgaataatt atcttgaaat
      841 taatacatta tcccaaactt aaataaatgt catctgatca atatatcttg gaatggaaag
      901 ggaagagaat gtgaagggca tcgcttcatt attcattaat tttagagtaa tgtaggcaga
      961 tgaaatggtt atttcagagc actg
//
LOCUS       KCKM01000585             711 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9274apa ultra-conserved element locus
            uce-3264, sequence.
ACCESSION   KCKM01000585
VERSION     KCKM01000585.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 711)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 711)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..711
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9274apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>711
                     /note="ultra-conserved element locus uce-3264"
BASE COUNT          187 a          133 c          172 g          219 t
ORIGIN      
        1 agtcagcttt cctctggaaa cgtttttgac ttagtagagc cctgtgagta tctactcgag
       61 gcagtagatg agacttaatg tttaagtggt aaattaatgt tcccttttgt ccctctcctt
      121 agggatcact tgattttaat tatttatttg tttgttttaa acggatgaag gcttcccaat
      181 gcacttccag tttcacccac taccttgtgc tggcagtaaa tagcctgcaa aaaaatgtca
      241 tttgctgggg gattgttttt ctgtttattg gaggtgacat gagcagtggg gcagcggcaa
      301 agaggccgtg ttgccattgc taaatataca tccctgacag tctgataata ggttccagga
      361 agttcagtgg aaaattaaaa caaagcaaca tttatagctg attgaacttg aaaagcagtt
      421 ttcatgttga atggcaaata tgtggacttc agcattccag gagactgatg cagctccact
      481 ggatgggcct gaccttgtgt gcagaatgga ctgtggacac agcagcaggc agaatggctt
      541 catctataga ggacttcatg gggaggaaaa atttgctatc gtgcacagaa atagttctca
      601 catacgccta tatttataca gtgtccacag gtctgaatag catctttcgt atgagggttt
      661 tgcagcatgt tagcgctaca agaatgtctg gtgctggggc tgtctttgtc c
//
LOCUS       KCKM01000586             461 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9290apa ultra-conserved element locus
            uce-1430, sequence.
ACCESSION   KCKM01000586
VERSION     KCKM01000586.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 461)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 461)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9290apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>461
                     /note="ultra-conserved element locus uce-1430"
BASE COUNT          148 a           85 c           99 g          129 t
ORIGIN      
        1 tttttttttc accagctcca aatccccggc atatgacctt ctgttaaata gataaaaaaa
       61 aatttgctta tcagtcatgc aaatgaggct gaattcattt tccacaacag atggcctcat
      121 agataatgat gatggaagag agaaaattga atgtctctca caaggtggtc atggcaaccg
      181 agagcagaat aatatcaata ataagctcac tgcataataa ggttgtcaat cccacaaatc
      241 aaagtctcca gctaaatcag gtatcccacc cccagctagt tatcaggtaa atagagaaat
      301 agagagtatc ctttttcttt ttagctgagg agctgtgaaa agaaacggta gctccagcga
      361 ttccagggta caaggggaag gaaaatgcag aagagatttt tctccgctaa ttgtggttta
      421 tgtcatgatt cggggaggga ggtgttgggt ttttcctcta t
//
LOCUS       KCKM01000587             633 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9306apa ultra-conserved element locus
            uce-5192, sequence.
ACCESSION   KCKM01000587
VERSION     KCKM01000587.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 633)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 633)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9306apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>633
                     /note="ultra-conserved element locus uce-5192"
BASE COUNT          164 a          124 c          170 g          175 t
ORIGIN      
        1 taacatcgag tgaattttat aataagaagc catttttttt tcctgacgag ctgcccttgt
       61 gcctgcctgc ctgactttga ggtcctcatt attgtgggtt taaatgaagg atgttcattc
      121 aggcagggcg ggggaggcca atagacatcg gtgccgttat ctggtccttc tatcaggcca
      181 agtgacaggc ttctcgggga agaatgcaaa gctcatggtg gagacctcag cctgacacag
      241 aaggtgactc tcctgactct aaccttgaaa ggaaaaagtt cccactttat taaaatgaat
      301 ttcgaaaggg ccgctctgac agctgcataa ttaaatattg gagtgtcagc gataatttat
      361 tctgctcgca tttggtggtc agagcctgct cactgtaggg tcagcaagca cagtgacaga
      421 gccaaggata cagtggatta cggggccctt tagccacgcg agtgaaatga gagactgtaa
      481 tttttgttta aatagagaaa acaaaatgct gaggagatga gtgggctgtg aagtgctctg
      541 aatcgctgcc tggtaaaaat tgttaggtgt aacgttgaaa cttgtgctgg aactgctttg
      601 tctggcagtg cagtgggctt tcggctctcc gat
//
LOCUS       KCKM01000588             809 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9320apa ultra-conserved element locus
            uce-4013, sequence.
ACCESSION   KCKM01000588
VERSION     KCKM01000588.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 809)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 809)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..809
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9320apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>809
                     /note="ultra-conserved element locus uce-4013"
BASE COUNT          245 a          168 c          172 g          224 t
ORIGIN      
        1 aattatttta tttttttcaa agtatttgac tgacagccac ttaccacagc cagaagttct
       61 gggatatgtg atctacaaca ttaacattct agagaaaaac acagttattt tcaacttgga
      121 ccaataaatc tactaaataa gatacacagg aaagagtcta tggtacacaa ctgctacttt
      181 gtaatatgcc tttttggacc ctccagaact accaacacat gagaaatcac aaagtcaaag
      241 acttcaggag aactaaatca acacattgtg ctacggcttt acacttaatt ttcctacaac
      301 gtcaggtgct agggcaggca agttggcttt cccctccaca ttcaagccaa tttctctgtt
      361 tttcatctcg atctctcaga gattcatcaa aaatgcgatt taattacatc tcctcccctc
      421 cccgcacctc ctcccagaaa gagtgtaaac atgactcctt tttatctcct gatacatctg
      481 gacaagtaga caatgtgcta aaacaaaata aatctgccct gacagtcaca tcaaagggtt
      541 cagctagggg cttgcagcta cttaaggcac aggaatgttg ttgctaagca tcgctctaca
      601 acctatcagt cccttaaaga agagcttttc tctttcagag ggagatgagg aaagctggag
      661 agtgggaacc agactgcaaa gggagattgg ggattttgga ggattttgaa gcttaaagtg
      721 aattgtgtga agaagagagg gtttgttttg gtttgcctct tgacatacag tctacatttg
      781 gggagtgggg cgggggggga ggaggggag
//
LOCUS       KCKM01000589             921 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9334apa ultra-conserved element locus
            uce-2930, sequence.
ACCESSION   KCKM01000589
VERSION     KCKM01000589.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 921)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 921)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..921
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9334apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>921
                     /note="ultra-conserved element locus uce-2930"
BASE COUNT          271 a          199 c          176 g          275 t
ORIGIN      
        1 caacagccaa atgaacccca agttacgtag acctgtaatg aaagacaggt agattgaatg
       61 ggctacttat ggaagctatc tgcccatgca gctgcacaaa gtgcataaca tgagtaacat
      121 aaggctagct aaaaacctca cattatgtat atttggactg tcaccgcact tatccatcct
      181 cagaaagggt aatcttttct tcttcttttt gaagtgcaga atacccagct atgggtcagt
      241 attttgtaat gtgaaatcac aaagtcagta aactgcaaga atcagtgagg ttttttgagg
      301 gggttttgtg ctttttttaa agcaaaagag acactgatgc ttgcttcttg gcagagcctt
      361 tgtattcacc ttgtttagta caagcacttt cctaaatagc tcagtaacgg gttcactctg
      421 atacacgtga ttattaaaca aaatttcttc ctttctttat aggctgagca gagcaacagg
      481 atcactgacc tccagaaaac tcttctctaa ggccacacgt atgttggtct ctatgctggt
      541 gcgtttcttc ctcctacggt tcacgccttc aatccccatc cctggagaat tcagggcact
      601 tgggctggag agagttgaat cagatgagag gttttctgaa aaaagaaagt aatataaatc
      661 aggagatttt atctgaacac agtacattct aatgcaaatg ttcttcactt gtgcaaggta
      721 tgttaaaacc cgcgcattaa ttgctgcact tgtaaattac agcatatacg tgagacttaa
      781 aaggtacaag taatcccaga gggcactctc ttctttatgc taccacagta tcccttttct
      841 aatacctata caaagcttgt cccccttacc tcattccacc tcaggcttgc ttactgaagt
      901 tgcagtttaa agacaaaatg c
//
LOCUS       KCKM01000590             883 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9349apa ultra-conserved element locus
            uce-65, sequence.
ACCESSION   KCKM01000590
VERSION     KCKM01000590.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 883)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 883)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..883
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9349apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>883
                     /note="ultra-conserved element locus uce-65"
BASE COUNT          272 a          163 c          147 g          301 t
ORIGIN      
        1 ttaacggaac ttctgtctac atgctgtccc cataaaatgg taatttgtaa gtgcaagtcc
       61 ttatcctaag gtatgtctta gtctagactg aggcagggaa ctctaggtca gacataaggt
      121 gactgaaaaa aaagcgtttg atttattcat atctcttaat gtgaaatgtg tatttgaaga
      181 gactaaaaat ctcagaaaga cttttttgca acagccaatt actcttagct ttttaattct
      241 agcaatgcat ttggaacatt tccattgttc taagggttaa aaacttcacc gtgacaatga
      301 cgagccttat tactcagtca aagtaaatgg atcaccatat aacctttcag aaatgttctt
      361 ccttaagcta ttaaaacatt ccatgccctt agatgacaac aatttctctg ccttttgaaa
      421 tttcttttct atcctgcaga gttcatagag atatgcttgg ttaaaatcaa cttatataaa
      481 actatgcact gtaaattctg acacttctgt ttgaatctct tttcaaacac ttgtctttgc
      541 tcaccataat agatgtcagt tcttctgatg tagttcaagc atgagcttca tatgaagact
      601 cagctatgtc tattgcattt ctgaagctac tactcactga agttttgtgc tgtttgacat
      661 caaagatagg caagaatcac ctgctgagtt cacatgcatg gagcaaaaca tcttcaaatc
      721 acttgtgcta gacaaaagtt tttcgtatta agctttccct atcatgtgga cttaaagaca
      781 aatgtagtcc ttgttaaagt tgcagcgtcg tgttattaaa ctatgcatct gggcctcatg
      841 atttatataa gttttaagac aaaagataat aatttggctg att
//
LOCUS       KCKM01000591             972 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9364apa ultra-conserved element locus
            uce-4312, sequence.
ACCESSION   KCKM01000591
VERSION     KCKM01000591.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 972)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 972)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..972
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9364apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>972
                     /note="ultra-conserved element locus uce-4312"
BASE COUNT          275 a          196 c          195 g          306 t
ORIGIN      
        1 gatgcaggag ggagctagct tagcatagca ttcttcctga taaactgagc cctgatggca
       61 ggtgcttttt ggggatacag atttactgcc cagtgtgccc cctttttcct tgtcaaatta
      121 agttgattct accactgcct ttatcccagt ggtttttacg gagggccatt gtcttatttc
      181 aagtgctctg ttgcttggac tccagcattc atttcctggg gcttccccaa acctgtcatg
      241 taaaaccaag gatgagccat gcttggtcca gaaggccaca aaccttcagc agaagaagca
      301 aaggaacaaa gtaaaatggg agaatagggg atggatagaa aaaatcaaca cagatgggct
      361 accttctgag ctttgccaaa aagcgtatgc tttcattcgg aatgcagtgc gaaaacgctc
      421 cttattattc aagacaacat tcttaggctc ttttgaagga ctttcttcaa tggcatctac
      481 attcagagga gtaaatagct ttcctttagt attggtacca cgaacccgat ccaagagacc
      541 cagcttttgg ctacaaaata agcaaaagta atcattttcc tcctttgtac acttttatct
      601 tgttttcatg atgctttaag aatataatgg gttaagtaaa tgttttgtac acaaggacac
      661 tgctggggct accataatac gtcaatgtgt ttgtaagtaa cagttaagct ctacagataa
      721 ttagttactt tttatgagca ttttttctat cagtttaaaa tgataccgga gggtcttaat
      781 atcttctaca tgtcatgtat cacaatgctt cagctcccat agcttgtctg aagcattgga
      841 tttattttaa cataaacacg atgacctagg cagttatgtt gcctaatcat aaggatgttt
      901 ggtctttcct gctcagtgct ttctttaaat actgggtcta tggcaggcta ttaaacgaat
      961 aactcataga ac
//
LOCUS       KCKM01000592             748 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9378apa ultra-conserved element locus
            uce-2703, sequence.
ACCESSION   KCKM01000592
VERSION     KCKM01000592.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 748)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 748)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..748
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9378apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>748
                     /note="ultra-conserved element locus uce-2703"
BASE COUNT          215 a          130 c          160 g          243 t
ORIGIN      
        1 tttagctgaa aaggagctca tcagggtgat actcaagccc cgaagtggcc ccggtgatga
       61 aacggcattt gatttttttg tatttttttt ttctcttttt taaaagcaga gagaatgcat
      121 cgttcaggct gcgctgaggc gggtgatccg caaagcaata caaatcagaa atgagatttt
      181 tgaagtccta atgaacctga ttgcaggaac atttataatc ccccatggct ttaaatgaaa
      241 tcagatataa tcaggagcta tggggaaagg gagtgtttac aggcagagat tgggaagtgc
      301 tgctgtatta gtaaagatgc tgttccttct attgatgtct aaaatgatgg ataatgtgag
      361 aatggcaaat atactatttg tctaatggct ctgcaattaa attcccctgt aaatgaccca
      421 tgcctcattt catcctaatc tatggaattt tgattgaatt cgtcagctct aattgaaaaa
      481 tactgcactt taatgtctgc agtgcagttt caggaccgcg ctggttttaa tgagacggtg
      541 cccctctgac ctgggaatat tttagacttt tattcgggat ttttaaactg gcgaatttct
      601 caactatatt ccacaaaaag ccgtcaatag gagtgcatgt ggttttccag tgctagagac
      661 aatctctcag taccgacgtg tgttattaag gtctccttta agtgctctta aaatatttgg
      721 actacggtta tttaaatata tataaatt
//
LOCUS       KCKM01000593             612 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9394apa ultra-conserved element locus
            uce-4522, sequence.
ACCESSION   KCKM01000593
VERSION     KCKM01000593.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 612)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 612)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9394apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>612
                     /note="ultra-conserved element locus uce-4522"
BASE COUNT          172 a          107 c          132 g          201 t
ORIGIN      
        1 cacagcttgt gtggcagcaa acactctggc agttgtttga ttgctgtctg ggtcagaaga
       61 tcagctcttt ctacaagatg tatccacatt agtgtgtaag tgaacaggtt agaaagcaaa
      121 ttacagctgc ctttcttagg catattgctg tcgaagctta ttgttttggg gtttttactg
      181 tacatcagca gtaatatgcc ttctgaagac ttcatgtgac aggttaggca ttttatcctt
      241 tgagtaaaca gtaatcatgg tgtgaagaaa gtggggcatt ggagattttt cccattcttt
      301 gagaattcca ttcttccttt ttagtttgct ccaagggctc tttggggata catatattaa
      361 gccctttaaa tagttcataa taaatctttg tctcaggctg attctgacag ttttttaaag
      421 agtcttttaa gagagaatcc tcaatcattt gttaatccat ggggtgatct tcagacttgc
      481 aggaaaaaga aacagtgcaa gctccagggt tgtgaagata caatgcagaa aaattttaac
      541 tcagaagagc tcagaaaata ctacaccgtg gaagattcac caatcatact gtgttctgcc
      601 tgtgtctaag tg
//
LOCUS       KCKM01000594             961 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9410apa ultra-conserved element locus
            uce-2299, sequence.
ACCESSION   KCKM01000594
VERSION     KCKM01000594.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 961)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 961)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..961
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9410apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>961
                     /note="ultra-conserved element locus uce-2299"
BASE COUNT          297 a          184 c          190 g          290 t
ORIGIN      
        1 ccgctgtact ggtaagtggc gcatccgcag ctgctgtgac tttcaccaag tgctgtcctg
       61 gtgcaacacc agactgacct gaggggaata tagaggttgg tttaaggtcc ctttgcacac
      121 tgcccccttc tttgtcagat gctgtctgtg ctactgagtc atgaatgagg tcttagatct
      181 aggaatatat aatattttat ttgcagatgc tatgatatat acagaaaaga caaggaagga
      241 gggaatatgt gctaacaata ttttgtttct gctagattag tagcagcttg ctaaagtggc
      301 ctgccatcga acagtattta cagcaatgta taaaacatat tagtgacatc ccttttaaat
      361 tcaaaagctt tagctaatat tactgtctgc attcagagca gagctcggtg cgtaaaagcc
      421 ggtcaataaa cattttagta ctgctccatt ccagtgatct gaattcaata atgttacctt
      481 tccagaagct gcaaaatgga aagtgaaaga atgatttatg aagcttagct atgcatagcc
      541 agataagaaa gctttaactg atgcttgcag gattctcttt aatgaagtac aagttgccaa
      601 gataagttta ggtaaatgaa gcctctgtca caatatgtta cagcaaaaga aatgacagac
      661 acagcggagc agatggaggt tattacagaa cagtggtgtc aagaaatgta gtctaggtaa
      721 cagcacaaga acagaacaga tgcgttaggt ttgctattaa caatttcatg atggcaacga
      781 atatttatag aatctattta aattaagctt accaaacctc tttccttaaa ttatcatttt
      841 gccttcactg agatcatatt actgaaccat cacttccttt tgagtagaat actcctcttc
      901 cagtaccaca ctccttttat gatgttacca ttaactgcga agcctcagtg cttttctctt
      961 c
//
LOCUS       KCKM01000595             930 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9426apa ultra-conserved element locus
            uce-1865, sequence.
ACCESSION   KCKM01000595
VERSION     KCKM01000595.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 930)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 930)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..930
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9426apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>930
                     /note="ultra-conserved element locus uce-1865"
BASE COUNT          323 a          150 c          181 g          276 t
ORIGIN      
        1 actccaggag tttcactggg agatggtgag tcatgctaac atgcctttct atagcacaga
       61 aataaatcat ttttgcacat tccagtattt tggggagagg agagagaaaa tgcaaaatga
      121 atctaaacca catttgattc tttaaattta taataaatcc aaatgattta ccagaacata
      181 aaatcctcac atgcagagtc aaggacaata ttctattcat gtgcaagagt catttattca
      241 cttataatta gataaaatga actgcaattt tttaagaaaa aaatttgcat gtggcaacag
      301 taatgtatta cggaagggtg gcattttgtt acatgcattt gttagtcagg acactggagc
      361 tgcaatttaa tagacaagaa ataagtacag tagaggaagg gaaaaaatta aattccgcgt
      421 gatcagcaag gtttcgaaca atcgctagcc aactgaagtg gatgccatat ctataagtca
      481 ttttgtttta taggccatta ggatctcctg agagaggctg catggagacc gctgcttttt
      541 gttgaaatta aaatgtcaga gaaaaagaaa tagaacaaaa cagggaatct gcaattaatt
      601 acaaggccat aaaaattcaa taatcaggag gcagtgctgc tgtaggcaca gcggtatctg
      661 attcaggcta acaggaatgg aatacattaa tcttttcaaa ttagtttttt aatctgacgg
      721 ggatatatag tgacgtgttc ttttactgtt tgagcagagc tgctgtctaa tatataatgc
      781 tgagtgtctg gaattaggac atctatagcc attttgtgac tacaacattt tcacagcatt
      841 tattcaaccc tatctgtaca cctgtcctac agtaatcagg caaaacatgt tcaaagttca
      901 catcctaaat actgcttatg aaaaagaatt
//
LOCUS       KCKM01000596             547 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9442apa ultra-conserved element locus
            uce-5732, sequence.
ACCESSION   KCKM01000596
VERSION     KCKM01000596.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 547)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 547)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9442apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>547
                     /note="ultra-conserved element locus uce-5732"
BASE COUNT          167 a          104 c          115 g          161 t
ORIGIN      
        1 ctcattttaa ctaaagaagc tgaggtcgac ggcctctcaa atgaaacaga taaggcgaca
       61 tagggttctt gtcagaaaca aatgttatgt ctctccctac tgaaaagctt aaagatatta
      121 tcagcaaaag cctagttggg cctgaaatgg gtcccagaga agtaatatta accaggctcc
      181 tggcagatca tttatttatc tcaagctaaa ttcaataaag agagccatat ataagtgagg
      241 gaaaataatg cagctgctag taatttatca ttggatggaa agtcattgtt atccttatct
      301 ctccaatgat gttctatttc caactggtaa tgaattatgg ggcttgccac atctttacta
      361 tgtgacaggt caacactacc tcatgggtac tgtactgtat ttatgcaatc gatagagagt
      421 ttgctgagaa aatattggca accattttgt gagagtgacc cagagctcta cggccttacg
      481 gttggtggtg gtggtcagtg gatataacag cctttctaca ctccttcaga acaacgattt
      541 ctctgaa
//
LOCUS       KCKM01000597             645 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9457apa ultra-conserved element locus
            uce-7214, sequence.
ACCESSION   KCKM01000597
VERSION     KCKM01000597.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 645)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 645)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..645
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9457apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>645
                     /note="ultra-conserved element locus uce-7214"
BASE COUNT          215 a          113 c          101 g          216 t
ORIGIN      
        1 tttgtaattc tacaaatgtt ttgctatcgt ttaggtagca gtgaaagtaa taataatgtt
       61 tactccattg tatatcaaat gttttgtctt aatcaaagac ttgtttctgc acttcagatg
      121 gaaattcact ttgtatgtga atgcatcctc ttcctaagaa tgcttgtaaa tacttgtaat
      181 tcagtttaga attcttctta ttttttttaa aactataaaa ataatcctca ctattgaaaa
      241 ggaaatgtta aaatcatttg ccattactca gaagtgtaac ttcattaaag aagaaggcca
      301 tataatccct acaggatctc tctgcaggta atgctttatt cttacttagc atatctgtga
      361 attctatcag cactagtgtc tttcacaata tttgtttctt ttgaatattt atgaaggact
      421 gtccagtgac ctgtttagca tctccaggtt tgttctgcct taacaatctc tcaagtagag
      481 tgcaatcaga agactcattc tccctcaaca ccagcgatca atatggcaga ggccaaggaa
      541 atgtctgcag aaaagagatt tctatcaata aaatggaaga aacaaaacaa gatctaagat
      601 tgggctataa ttcacaaaaa aaaggtccaa acacctaaca ggtga
//
LOCUS       KCKM01000598             854 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9471apa ultra-conserved element locus
            uce-1793, sequence.
ACCESSION   KCKM01000598
VERSION     KCKM01000598.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 854)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 854)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..854
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9471apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>854
                     /note="ultra-conserved element locus uce-1793"
BASE COUNT          297 a          144 c          144 g          269 t
ORIGIN      
        1 atctttaccg tcagccttac ctgatgtttt aaaagaagtg ataacgtcca tttatctttt
       61 caggggggaa aaaaatccgt taatgcagcc tttgaataag tgctaccctg ctctttaaat
      121 gctaaagttc actaaaactc cagtgattta tgtgcagctt ttgactgcca gcacctggca
      181 gatgaagaaa cctactcaag cttcagtcat aaacagatag catacaattt aattttaatg
      241 tgctcgttag tcgtagcaca tttcagacat aattgtgaac acaacacaaa attatagcaa
      301 aaagacaatt ttaatgctgc tgtagaaaaa aaggttatat gaagagtcat ataatggtgc
      361 ttcattgtca acaacaaaac agggcacaga gtgcattaca gtgtctgtgc tgtttacatg
      421 ccaatatttt atacatagat tctcatatgg tgtcagctgt cagttacttc tgcaaattaa
      481 ctgccaaaaa tggagacgaa cagaatcact tagtgtgctg gtaaccacgg gttacctttc
      541 atatgcctaa agataaagct gcagtatgga atcttgggag aataattagg cagaacaaaa
      601 cagaaagtta ccaattgaaa taaaaaggca ttctacaata ggaaataaca accaagagcg
      661 cttataaata agtaaaagag gttatatcac agaatgcctc ataacttttt aagcaaagta
      721 ttacagtaca aacattttaa aggctttatc aatgtttagg aaatacagta caagtttttc
      781 aaatagattt aaccctttga gcactgagtt tattttgaat tctctctttt tatttttttt
      841 attttttttt tttt
//
LOCUS       KCKM01000599            1187 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9485apa ultra-conserved element locus
            uce-2125, sequence.
ACCESSION   KCKM01000599
VERSION     KCKM01000599.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1187)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1187)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1187
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9485apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1187
                     /note="ultra-conserved element locus uce-2125"
BASE COUNT          332 a          211 c          266 g          378 t
ORIGIN      
        1 cactgttatt ttagccactt gtatacctca aaatatttgg cagtgagctc acatttcaaa
       61 actcgtctcc gagtcatttt atggctgtac tgtgagccct cacagacagg cattcgtaat
      121 ggaaacactg acccaaggtt gtgtagcatg gcaagccgag agctgttgca gtggtcctga
      181 ctcctttgtg gctgaaatca actggaagta cctttaaacc ttcaaagtgc ttctagccag
      241 tgcttgactg ggaaatacct tgtgctacag cttctctgtg caggtacctt atctgggggg
      301 gcagagcagc actgcatcct gtggtaaggt taacatgaag tgagttttta attaaatggg
      361 ggaagaaaag agggcatttt acctcaatca gattaaatca gacctctctt tggtgtgtga
      421 ccatgatact gaagtagcac tatgtcaaaa gatctaagat ccattcattt gcagtagggc
      481 agcaatatgg tttacaggta atattattat caacctactt ttttaactat atgttagact
      541 aacttgttta aacgagaaag gaagccctgg gcacaaaggg atcttcatgt tcatttggtg
      601 tattaggaga ggcacccagt taaagagtgt tcattactat tgtaaattcc tgccccaggg
      661 cttgtatcct tgcgctagat tacatgaggt ctatgttcat ggacagcgtt tggcgtctga
      721 ttgaaggtcc agcgcagcta attaatttca ttaggaagtg aagtcatctt ctagcaggaa
      781 ttaatatttg gagcttcgtg ttgctaattc atttccagat ttaattagct tagagaagaa
      841 atgttgcttg ggcaagagga ctttttaatt atcagcttgg ataaatttga aaatgttgat
      901 gcctaggggt tgagttaatt aaaacctgca ttattttaac tttaattagc tcccatcttt
      961 gttttgcttc accatatggc catgtcctgt agtcaaattt agttaattaa gctaattaag
     1021 ctaatcattt taattactca agacaatatg attggataga ggatgactac aagtttatgg
     1081 ccaagtactt ctttttcatt aagttgaagg gacagagtta tttctgattg cggctggcaa
     1141 gcagtgccgg gagttcaggg atgtgacagc ctcagagata ttaaggc
//
LOCUS       KCKM01000600             792 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9500apa ultra-conserved element locus
            uce-1809, sequence.
ACCESSION   KCKM01000600
VERSION     KCKM01000600.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 792)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 792)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..792
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9500apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>792
                     /note="ultra-conserved element locus uce-1809"
BASE COUNT          221 a          142 c          171 g          258 t
ORIGIN      
        1 tgctgtgggc ttttttcccc ctgtgttaaa tcggatatgt gaggttatct gggatactga
       61 aaagctatac ttagaaagta tttatttttt ttataatgaa tgatggagtt ctttttgctt
      121 ctggcaacta taggcctttt ctgaatacag caaatgactg tttcaaaatg aaaaccacta
      181 tgtgtttgaa tgttgcatta tgcctagttg ctttttgagt gaaaggcggc tttaaaaagt
      241 taggtatatc attgccaaaa agggctacat agtattgtca gcattttgag aaggaatagg
      301 tccttttttt cctgaaactc cattctggac agctgttagt gacttaccaa acttttcata
      361 tggatatgta tgttaatgac aggcaatgaa ctggagatga agagacccaa acacagaccg
      421 atctcttcag tgcacatcaa aagcctttac aaaaggagca gtaaaagagg cagtgatggt
      481 ggagccttca cttttgtaca ctgaattagt tctgcaagca atgaaactga tcttttctcc
      541 ttgccagaaa agtctggtga tttttgtgag tgctcattag cacaagaggc atttgtgaag
      601 ataattgact gacgccgata ctgccggctg tcacaacagt gccagcagtg tatgtgcgtt
      661 ttaatagttg tattttttcc ccctttctta gatataatgc tttctgaaag atactggctc
      721 tctaaagatc tacttgctca tgtgaagcag ggagtttaaa gaactcccgt tcagggaatc
      781 tgcccgtctg cc
//
LOCUS       KCKM01000601             855 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9531apa ultra-conserved element locus
            uce-7163, sequence.
ACCESSION   KCKM01000601
VERSION     KCKM01000601.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 855)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 855)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..855
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9531apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>855
                     /note="ultra-conserved element locus uce-7163"
BASE COUNT          232 a          231 c          240 g          152 t
ORIGIN      
        1 gagaggccac ctaagccctt cgcaagagct gcaagcggac ggtgagcaca gagagcggat
       61 gtcgagaacc actttcccgg ggaaagctca ccctgaagag aagcagagac gagaggggac
      121 tgctgcggaa ggacagacag agctgctgcg gacaccagaa ccaaaaggac gagctacaga
      181 cgtatcctct cttgacctag gcaaggagga ggagacaccg aacggcagac agacagaggc
      241 cagctccgaa agggccagtg ggaggcagga cttactcatc tttttacaca cagccataca
      301 atactcctct gactcaaaat tgttcctgtt gcctccgcag cctccatata taaagcgaac
      361 gcattttctc ttgttaggat cgaagtacca acgaggcatc acagcccggc agggccctgt
      421 catcgcctcc tgggagcaga cagctgtgtg gagacgggtt agaacatagc tggtgaggag
      481 cacacaggcc tggccgagca gcttccttca cccccaagag cgacttctcc ttagctagaa
      541 gcccaaacag cgaggatcta tacggccgac gccgcggcgt tacgcctcag gtgtcccagc
      601 tgtagagcct ctgctctggg tatcaaacca acgtgctggg aagaaaacaa agacgtgctg
      661 tgctgctgca gctctgcctg ggcagacact ttgcatctta aaggtgtgag agcaagtgca
      721 aaggcaggct gagcaaaagg aacgggattg ccgtggccat ctcagctgcg ggggttttaa
      781 gttttcaaac aggtctaccc taaatattga aataaatagt caaactccag gcagccacgg
      841 cacgtgaacc gcttc
//
LOCUS       KCKM01000602             891 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9547apa ultra-conserved element locus
            uce-7472, sequence.
ACCESSION   KCKM01000602
VERSION     KCKM01000602.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 891)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 891)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..891
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9547apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>891
                     /note="ultra-conserved element locus uce-7472"
BASE COUNT          233 a          195 c          196 g          267 t
ORIGIN      
        1 gtgtggggaa gggcaggggg gcaaatcagg gggtgactgc tctctgcccc gagtccaatt
       61 ccaggagcgc ctctttccca cggcgaagcc aatcaccggc gcggcgagaa gtcaccagga
      121 ggcacccggc tcgcgtagcg gtgcccaggt acccgtcagc cccccgccgc cgcctttaca
      181 tatcagctaa atttgaattg atgataggta cagtgtttgt aatcctacat caagcggcgc
      241 tcgtgtctgg cgtttatttg tgctaccgct ttggcagctt cttcccgagc ctcctctcat
      301 ccgacatgtc aggtctacaa tcaaagagga atagtgaatt cacttttaca gttaggcaag
      361 ctgaatgcta ttacccgtgt atttgtcacc aacctgcaga tcccagcctc taatctgcca
      421 tctggatgga tgctacaaag ttaagagcca gggacatgca tttctcagta actacctgct
      481 gtcagctatt attttaagga tcctgtgatt ttcttttatt ttgactagaa aaaacaaggc
      541 agctgcagta ataaaaaggc atatcaacta gtcactttct ggcagatttg tcactggtgt
      601 ggatacagta gtggtatttt ttgttagcaa atgtatacag tggaatgtaa tattgtaaat
      661 ctgtagtgcg ttcttcacaa aggggggaaa aaaaattcct ttttagaacc ttgtatagca
      721 gtcaacaaaa taaaaaatga aaacgtattt gttttcacct tattgtacac atgtattata
      781 tttttctttt acaatattgt ccattgtgtg caacatactt tgtaaatacc gtgcttggtt
      841 ttaaaaattg ctactgtcct ccaattttag tgtagttctg acggctgtat a
//
LOCUS       KCKM01000603             674 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9563apa ultra-conserved element locus
            uce-1572, sequence.
ACCESSION   KCKM01000603
VERSION     KCKM01000603.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 674)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 674)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9563apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>674
                     /note="ultra-conserved element locus uce-1572"
BASE COUNT          210 a          138 c          114 g          212 t
ORIGIN      
        1 attccactca gtactaaaca ggaacactgg ggtcaaagca aataaagcag tatgagttaa
       61 tgagaacagc tttagcaaaa agaggaggtg tttctcaaag tacatcaagt gcttcacata
      121 tattaagaaa ccccagctga atcgatttaa taatgttggg atttacacaa ttattacaga
      181 gccttcatta ttcacccagc ccgcacatac cacagcacaa atgaacatct cagtctggtg
      241 gtattaacat tgccatttcc taacccgttc ccaggccatc tgctacatgc tgatcattca
      301 ctgctttaac atttaacagt tacccaactg caacttagca gatttgtgta cttttgaaaa
      361 cagctggttt aataactgct tcagagcttt tggataaaga aattattttg cagtgcttta
      421 aagtaatgca ccataccagc gcctctgaga aaagggtata gcggttgcct ccgcaaattt
      481 atgaattttc aactcttcat tttatttctt gtcacatcgg gaaaaatcct tgtttattta
      541 tagaataata attcaagaaa tctcttttac cattcctgct ttattttgtg tcctctctca
      601 actacagagg aaatattttt gtgctgaggt aatgaaagag cttcaatttg tctgaaaggc
      661 tccaacttgg agtt
//
LOCUS       KCKM01000604            1095 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9577apa ultra-conserved element locus
            uce-396, sequence.
ACCESSION   KCKM01000604
VERSION     KCKM01000604.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1095)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1095)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1095
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9577apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1095
                     /note="ultra-conserved element locus uce-396"
BASE COUNT          350 a          189 c          202 g          354 t
ORIGIN      
        1 aagatgtatt caaattccta tttcttttaa taaaggagaa aataagaata gaggagtttg
       61 ttgacatctt tgcactacta ttcgtattgc cagcgtaaag acacaaaggg gtatgaaatt
      121 atgaactcag aagagaatta ctctgatgac agactctcat attgagggtt tcttacattt
      181 agtaaactct tgatctccca aaagtgcgga aactgattcc aataatttgt tgtcacattt
      241 ttaaaaatat agataatttg gttttatgaa acaaatttaa gagaagatgc tgtttacaaa
      301 agcataatgc tatttttgaa gctgctagtt caaatattat atgtgatatt ttctacagga
      361 tgtgctattg aaagggttaa gcttttctga ctttcagata caatgaaatt atgacaggaa
      421 gaaaattgtg ccattttagc atgaaaatgc ttgtacaaat actgtcgttc cttccttctt
      481 actttcttta taatgcctca acgatagcta agatgacaga cgtttgacag gtatctgtaa
      541 gcatacaacc caggcagctc attaaagttt ttctttctat gcatcagctt tcacaaaggc
      601 aaaaacccat tagcattgac tattttgcag attagaagaa ttaagggctt caaacgttgg
      661 cttataccaa gcaatgtcat ttgtgaagtg atgtttgctt tattatttcc ctttctctcc
      721 ctctgaaacc agactgacat gactttagct caacgtaggg cgtaatgtgc aaaccaaagg
      781 actggctcac cgatgaaaag aaacacattc ccttttatac atgactggaa tggcaaaaag
      841 gggagacttt acatgtacta tttaggctca ttagagtact gattatgata gttctccggt
      901 gtaatcttta atcgactttg acactagatt tgccccgtta caaatcctgt catgcaaatt
      961 aagtcatttg tgttgtttga tatggaaaga tctgctatga aatgaaagat tagttcacag
     1021 atgaggcacc agagactgct gcccttgtgc accatgcaac tgattacaag gatgagagca
     1081 tccattttta cactg
//
LOCUS       KCKM01000605             809 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9593apa ultra-conserved element locus
            uce-7209, sequence.
ACCESSION   KCKM01000605
VERSION     KCKM01000605.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 809)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 809)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..809
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9593apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>809
                     /note="ultra-conserved element locus uce-7209"
BASE COUNT          223 a          164 c          224 g          198 t
ORIGIN      
        1 tggcggggtg ctcaaaaaag gtgatttagg actcggctgg aaaggattca acaggcgatg
       61 catagggttg gtgcgactgg gcgagactgg cggcggagtg gaactgtttc ctgccagctc
      121 tcgaagcctt ctggagaaat ccatcgctgg ggactcaatt gccatggggt ttaaacgcat
      181 aactctgtca aaggcactgg gatgctgggc aactaacccc atttcttcgg cactaaggcg
      241 atgtggatcc aggtgatgac gaggcggtgg gctgaacagc ggaggcgtgt ttgggagccg
      301 accctcacca aagccagggt gttcacgcaa gatgggtcct gtcatccgca aaagattgaa
      361 ggggttgttg tctccaagga aattcatcag cggggactgt gcaacagtct ccggtcccag
      421 aggaggaggg atggtgatgc gtggagtaag ggaactgttt gaagggcttg tttccaggta
      481 gatgcggaat ccatgtgtgt tctgggcatg ctgaagcaag aaccaagcgc tattaaaagg
      541 ctgcttgcat gttgtgcaaa tatagcttga aggctcatct ttacctataa aagaaaaaca
      601 gaaagaacac tcaaaaaata atacagcgga gaacatttaa atacagttgg catgcgcttt
      661 attttgctag cacatttcct ccttggcatt tctgaaagaa ggacttaatt gcaatgtatt
      721 gactgatata aattgttgaa cagcacattt actcaccaca cattcactta acttgtatga
      781 caaatatcac acatacgcat tggtgctat
//
LOCUS       KCKM01000606             546 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9607apa ultra-conserved element locus
            uce-4299, sequence.
ACCESSION   KCKM01000606
VERSION     KCKM01000606.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 546)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 546)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9607apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>546
                     /note="ultra-conserved element locus uce-4299"
BASE COUNT          168 a          123 c           91 g          164 t
ORIGIN      
        1 tcatttgcct tggaaggaca tgacaaagca gcactcactc aacagcctca ggcctggata
       61 attaaaacct ttatataata tctggtaaaa gagtaaacag tctttgcata gcatactgaa
      121 ttctatatgc tcccaaccct ttccacttgc agctcaggct tgcagggttt ttttattttc
      181 cagagcatct cgaacagata atcagagcgt gctgacattc agcagtaatc aattagcacc
      241 tactttagat taaattgaga atatgtaaat tgggctcctc atcaggcacc acagtcaacg
      301 tttcagagac actcaccatg ctctgaacat atcaaacaga tgaaatacag aagttgttcc
      361 aaaccctact ccaaaatggg aaaccaggag ggctatacca accatttaag attactttta
      421 tctgttcggt tttctttaac atgattagct tgtgttaaat tagcctttac aattcttttg
      481 ccaacccgag gccaatctgg ccttttttat ggagttactt acatttaccg tatgataaaa
      541 tgcacc
//
LOCUS       KCKM01000607             497 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9623apa ultra-conserved element locus
            uce-6731, sequence.
ACCESSION   KCKM01000607
VERSION     KCKM01000607.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 497)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 497)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9623apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>497
                     /note="ultra-conserved element locus uce-6731"
BASE COUNT          145 a           89 c           88 g          175 t
ORIGIN      
        1 tgtgtgacgt agcctttttc tgtttgtata atgttgtgat taaatatggt ggggccctag
       61 ggagcgaatt ttttatttga aggttaagcc aatattagca aaaaataaaa taaaattaat
      121 caaatggccc agagcatcac agccacagtt gattccaaga atgtttggtt acaaaatgag
      181 caactgatta attgtgtaaa tgctgttaat tagctgtgca gagcccctaa ctgggctttt
      241 ccctgtaact aataagaaat caattagcta atgaagtggc cattaaatgc tatgctaatc
      301 ttagctggga tatttttaat gtttcttctt cttcttcttt tttttccttc tttatgatcc
      361 ttcctaattg ccattgccat acggagctca cagctttcag catgtctaat gaaacatcat
      421 tatatcataa ctggcattct tggaagagtt agtggcaaac ctgcttccca attattttta
      481 attgccagac atactca
//
LOCUS       KCKM01000608            1077 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9638apa ultra-conserved element locus
            uce-325, sequence.
ACCESSION   KCKM01000608
VERSION     KCKM01000608.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1077)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1077)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1077
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9638apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1077
                     /note="ultra-conserved element locus uce-325"
BASE COUNT          332 a          223 c          182 g          340 t
ORIGIN      
        1 atttactttg ctgtttttaa tggtgaaaaa gcaatccatc tgtctgaact ggaagcttct
       61 tataaataaa caacaataaa aaccaacaca tgaaattcat ttcgcagact tctgttttgt
      121 ctgagtctcc cccagaatct aaatcaagaa gagatcaggc tgtagtttgt gagtaaatat
      181 ctttcaactg aaacaaacaa aaccagacaa atataaccat cctccttata ctttatgcac
      241 agtaatgcaa gttattttcc actccattta gacttttcac cttcctttca tttaccctgt
      301 tttttacagt tcaataaata tttttccaag ctccacttgc caaacaaaag agtttagctt
      361 cagtgttact cctctgacaa atatccttat ggtgttgcac atgtgagcca ttgataaaca
      421 aattaaaatt ctgtcccagc tcagagctca gctggcccat ttcatcttgc ggtatgggtt
      481 tgtaaaggtc tgggtgtctg tcatcctccc ctaaccttgt ctttgtcaaa gggatacaaa
      541 agcctgcacg ctcggggcct tacgatactg attagtgtga gtgacaaagt ggagtagcaa
      601 gtccactcag cccttcataa taaatctatc aaagagtaat agaattccat caattctgca
      661 tcatccccga gggtcgctgt gctgggatgg aaagtgtgtt ccgctgggat tgtacaactg
      721 ttattattca attacactct tttcttccta gttaaagacc atgatatcat tatcacttaa
      781 tgaatacata taattggatc tggactctat gtttggctga tgaataccac tcactattca
      841 ttcagtctca gctcatcttc tgaccattta ttatagactt ttggctgaaa accatgatga
      901 caaagggaat ttgaaattag ctgagatttc attcaatgct cagttagaca caaaggcaaa
      961 atacaatcct gacacataaa tgaggctgag accacacgga gaagttttac ctaaaagtta
     1021 atcgccgttg ttttatacat aaacatgttg aggtaagtgc aaagatattt ttcaaga
//
LOCUS       KCKM01000609            1037 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9654apa ultra-conserved element locus
            uce-1239, sequence.
ACCESSION   KCKM01000609
VERSION     KCKM01000609.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1037)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1037)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1037
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9654apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1037
                     /note="ultra-conserved element locus uce-1239"
BASE COUNT          303 a          247 c          207 g          280 t
ORIGIN      
        1 tatcatatta actcacaact taccataaaa aaataagttt tcaagcagaa atatcaaacc
       61 tgcttggtag tggtgggaag ggaggcagga gttaggtggg aatatatctc tagaggggat
      121 gtgggctctg tgctgcctgt gcaccccttg gcctgcagtg cttgggctgc actgggtggg
      181 agccacgact cactgtccgt cacacaaaaa atctgcctcc atataaactc accagctttc
      241 agccctttgg acaggctagc ctcagacatt gggaaaaagg gagagactgc cctaacttcc
      301 caaagccacc aactgcagct tttccttcag agattttcac cccctcttgg aatcgggaag
      361 gggtcgtggg gatgaagact gtgcgggtag gacagcacct ttttcccatt caccaaggtt
      421 tgattctctt tatgagcatg atccgccaat ccgtaatcaa gggttaattt cacagctcac
      481 tgcttcatct agcataatat ccattcagac taattaaatc tgtctaataa tgtgagtgtc
      541 tttgtctttg ttctttccat tctttgtttt acacccttca catctcatct ccagaactac
      601 acgccatcac actctgcttg acaagcagaa tccatcccta aaattaaaac attcctgacc
      661 tatctgcgat gacaaggcaa gcaagcttca cagcgctgcg gcccatgaag ggagctgaca
      721 catttgtttt taatttcaaa agagtagaaa gtgaagatct gaccctgtca atcaggccct
      781 gtgacaagtt taatcattgc tgccccacaa aaatcacggc taaataggaa tgcaaataat
      841 gtatcacagg gctcttataa atgctaatca aggagaagta atcaactgac aatttcactg
      901 atctcctttc tgaagaagtc agtcaacgca ctgtctctgg accacaaaga gaagaaaaga
      961 caaaaggcat agatgccgtt tcccaaaaaa acctatcctt tttcagggct ttctttttct
     1021 tttttataga gaaaaac
//
LOCUS       KCKM01000610             750 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9670apa ultra-conserved element locus
            uce-7320, sequence.
ACCESSION   KCKM01000610
VERSION     KCKM01000610.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 750)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 750)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..750
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9670apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>750
                     /note="ultra-conserved element locus uce-7320"
BASE COUNT          236 a          148 c          137 g          229 t
ORIGIN      
        1 accctctgtt cccagcgctg tgaggctgcc tgtcagcggg gagcataaaa cagattgtga
       61 cacagggcag tgattttttt aacaatccta ttatgaaaga cagagtgctc ccatttcctt
      121 tgcagctttt atcaagactt aaattgctgc caagggagaa ggggaaaaaa aaaaaacctt
      181 gctgctttta ttttattttt aatttttttt aagaagagat tttgcttagt tactgaattc
      241 ctccctaagt ctcctcgaag cagagatcca acactatccc tattaaatta tatagagcga
      301 gtccagtcct tggctgtcag cgggacccat cagtcctaat ttatcgcccc aggaaacaca
      361 gtacaattat ggtaataaat aataatagga ttcagtacat gacaacatga atgatggagc
      421 ctctcagaac tcatttacat tgctttgtgt tgcaatcacc ctgcttctaa tgtaatgcca
      481 agcaaatgag cctttttgaa tattgtgcaa tctattgcaa gtcaactggc acaaaactca
      541 ctcaataaat catgttcaaa cacatgcctc taatgacagg taaatcaaca atgaagtaat
      601 tgcatttaat gtattgaaat actggacaaa aacagtgacc tcaaagtgac tttttgtaga
      661 aggtttgata tagttgcaat ggcaaatggg tcttttttta tcaggcactt cttgctcaga
      721 tgcacatgtg agaattaatg ataccatttc
//
LOCUS       KCKM01000611             931 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9686apa ultra-conserved element locus
            uce-7074, sequence.
ACCESSION   KCKM01000611
VERSION     KCKM01000611.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 931)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 931)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..931
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9686apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>931
                     /note="ultra-conserved element locus uce-7074"
BASE COUNT          341 a          168 c          155 g          267 t
ORIGIN      
        1 ttttctgaaa aaaaataagc aattcacagg atagtattca ccctctatgg ataatcaagc
       61 gttcaattca aaaggtgatt ttgaaaaaaa agatacctaa caagagagcc aaaaatctgt
      121 agaaatatgc ctaaacctgg acaaagacag cagatctctc tgtagaggaa acagagtatt
      181 acaggatgaa taaaaattcc actgcattgt aaaaagtcag ctgcatggct tcatcaaagt
      241 gtcttgggga aaagatttac tataaattac acctcagcaa tatatacaaa cttcataaac
      301 gaagtatagg attttaagag acattttctc tttcttttgt caggtctgga gtcattaaac
      361 agagattagc tggataaata gaggaagtga tttttaaact gtttgcaaac ttaatgtgaa
      421 gagcccagcc ttgcaaatta tcacgtctaa tcagagatgc acgcttcact gctccagtaa
      481 ttgtaccagt attagtcaaa ttcttgttgt ctcctcatta gccatgaaaa ggagactcaa
      541 gatgtacttc attagagtat cctgaatata aattgctagt gtaaggagga agagatgtat
      601 tacacactct actgtatata gaaagaaaaa tattaagaac ataaaacaca ctgaatcatt
      661 ctggtgctac cctgaatata tgattttaac aaccaaccca ctctcttccc tcttttcatt
      721 ttactgtctc aatcccctct tttatttgca gtgagaccat agcacttgaa aatgtaattt
      781 acaaccaatg ccataaaaaa aaaaagagaa aagtggtgta ttatgcagcc aatcccattt
      841 ctgtagccag aggaacacag cttaatcaag aacgatatct ttactagaga catttggtaa
      901 attcttgact actggataac agataaaact g
//
LOCUS       KCKM01000612             610 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9701apa ultra-conserved element locus
            uce-7685, sequence.
ACCESSION   KCKM01000612
VERSION     KCKM01000612.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 610)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 610)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..610
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9701apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>610
                     /note="ultra-conserved element locus uce-7685"
BASE COUNT          215 a          109 c          115 g          171 t
ORIGIN      
        1 gtcgaagaac gcacttttta ccagtagacc atgtgcttac attatatacg ataaacacaa
       61 tattgtggaa gaaatgtatt aaagtggatt tcaaaagata gatgaaacgt aaacccaata
      121 accttccttt caccattaaa taacgttata gaaagttaaa taatgcacaa aacatacagt
      181 gatcagccaa atgctgtcta accctatcaa acacaggtca atgccatcat agcagccgtc
      241 tgaaatttcc tccactggag ttgccgaatg ctttggaagt acagaaagcc tagaattgag
      301 acagaattac actagcattg tgtaaataat caaactgtga cctgtggggt taaaacctat
      361 aattggagtg atacttcaaa gagatgacta ctttttcagt gctattttct gcaggcagat
      421 aggaagatga cttgttggga ttttattggc cagcaatgct actgcaaaag tgatattttc
      481 gacagctgct ggtgcatttg tgctctgaca aattagaggc taaatcgaag cattaaagaa
      541 catcaaaggc ctaatttaat gcaacaagta ctccaactgg atttacagtg aattaataat
      601 gcagatttat
//
LOCUS       KCKM01000613             770 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9716apa ultra-conserved element locus
            uce-1529, sequence.
ACCESSION   KCKM01000613
VERSION     KCKM01000613.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 770)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 770)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..770
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9716apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>770
                     /note="ultra-conserved element locus uce-1529"
BASE COUNT          271 a          117 c          151 g          231 t
ORIGIN      
        1 gggggattgt tccagaatta agtaaggacc ttacagagaa ttggcttagc ttactgtttt
       61 atgcaagaga tcaaaatatt tttaaggaaa cttcaacaag ttgcttttct cgttttgaaa
      121 gggaggtgga aaaataatta cttataaatg aaaaaaaaaa tccctgcaga gggcctgtcc
      181 tgtttcattt ggggtccagt aaaaacaaca aaaatacaac gtcaagtaaa agttgtaagc
      241 ccagaaataa ataaaataag agcatcagtc atttctatca ctggggaact ttcttcatct
      301 aagcacatat gaacaattga tccttgtagt catatatagc agtaaacatt aataacttaa
      361 cagtctgaag tcagtgctga agatatggag cattattgaa agatggagtc gagcaggtgg
      421 cactttaata tgttcagtgt catggttgac tctaaagact agtagaatga aattacttga
      481 ggttctaaag atttaaaaag cgaactcatt ttgctgcact aaggaaatgc tactgatcag
      541 gctttctgtg tccctttttt ctaggctaga aaatattaac cctgaagaaa atgacatggt
      601 aagccattct ctgaggagat ttcttgatgt cagtcttata tcttagaggc ttaagttcaa
      661 ttgagtgggt ttcaagaact aagatgtggg aaaaagaaga attgacacac taataatgta
      721 catctttgct gcaatatgaa aattcaataa cttcactcag tcaatttaca
//
LOCUS       KCKM01000614             908 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9732apa ultra-conserved element locus
            uce-4301, sequence.
ACCESSION   KCKM01000614
VERSION     KCKM01000614.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 908)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 908)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..908
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9732apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>908
                     /note="ultra-conserved element locus uce-4301"
BASE COUNT          263 a          149 c          193 g          303 t
ORIGIN      
        1 gtgttctcga ggctgtgtgt gtgtttatct cgcagtagtc gaatgacgtt aaagtggctt
       61 gttatttaaa taaatcaatt aatagtgcat aactgcctat caatttctta tttatgtgta
      121 tgtattgtaa tatatgtgta attttattgg aatttgaaaa gcttggatgt ttttcacacc
      181 ctttggggca aacaatgaaa ttaaattgta tagtgatctt aatctattat taaaaggtcc
      241 tggaaaggaa gattacaagg tagattcagg ttttgaatca gttttgccat tggtttagca
      301 gcgggtgggc aggcagatgc ctgctcagag tagaacctat tgccattttt caccattgat
      361 agagtagcct ttcagagtca atgagctctg tcaatgtgag cttgtcaagg ctacaacttc
      421 atagacctga gaggcggttt gagaggtcag cccttttcag gtttgctgtg atgcaaatga
      481 actttaatgc ttaaacaact attggaattt ttatgtctgc tccttgttct tttttcttca
      541 caaagtcatt gacgagacat tcagtgcttt ttaaattgga agttgcattg tgctaaagac
      601 ctagtacaga tttacggagg gctgaaagca gttagatcat gttcttttca tggtgcgatt
      661 agaatcaaat cgatttccct acagccttca gcattcagat ggcaatttta acaaagcttg
      721 ggggctagac aagggacaaa acgactgaac tgaatgttaa ttacactctg cagccttatt
      781 ttcttttgat ttggagctga ctggcaacta aattaacaaa agtgtgacca taactgctgc
      841 cctattttca tttaaaaaga gagcagactc taaaaggcta tctttacaaa gaaacaagtg
      901 aggtctac
//
LOCUS       KCKM01000615             779 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9747apa ultra-conserved element locus
            uce-2587, sequence.
ACCESSION   KCKM01000615
VERSION     KCKM01000615.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 779)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 779)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..779
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9747apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>779
                     /note="ultra-conserved element locus uce-2587"
BASE COUNT          251 a          150 c          154 g          224 t
ORIGIN      
        1 atgtaaatag gctctactcc ttggcactgt atagccagtg ttgctggatt tgggaaacct
       61 gtatctcccc acaaagcatt ttcatacttc aggtatcaac aacattcagt ttttcttgat
      121 ttttaaaaat gagcttttgg ggatttgcag aataacgttt ctgctttttt tttcttttaa
      181 cttcagtttt ggaggaagac actcctccac acacacatgt acatttttca ctttttttgc
      241 attcattcag catttgattg aagagttaat tcagctccac tgaacaatga tagatgtaac
      301 gaacagaaag gtcttccaat gtgagagata ttcttctcaa ttctttctga caggcaaggg
      361 atggtaaata gacaaaacag agtcaagcta ggcagcaaac ttgtaaaaag aatgactctg
      421 gtaatgtaca aggacagcat gcacatcaat gaatacttac ataaatgtct gcaccataaa
      481 atccatcctg gtatacaaca ctgcaaggat gcacacacaa agaaaaacat ccatattagt
      541 gcatttccac atgcaaatgc caccaacccc tgcacagctg aggttagtgt tgtcacaaga
      601 acagagggag gggaaggaag gcactcttca cattggttaa ggaggttggt aggaattatc
      661 agaagtgaaa ctgtaccaaa tacgtcatcg tatacagtat gccaaatgct tagtcaaaga
      721 gaggcaaagc acggcaggat tgaaaaatac tcgtgataac atttgtttgc gttttttgg
//
LOCUS       KCKM01000616             699 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9762apa ultra-conserved element locus
            uce-6625, sequence.
ACCESSION   KCKM01000616
VERSION     KCKM01000616.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 699)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 699)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..699
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9762apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>699
                     /note="ultra-conserved element locus uce-6625"
BASE COUNT          179 a          128 c          154 g          238 t
ORIGIN      
        1 acagactcaa atggcattaa ttcttgggat tgcagctgaa ttactgtgaa ttaggctgtc
       61 atacatggga aaagaaggga ctcttgcctg tgcagtaccg ttgttggagt cctgaggctg
      121 ttggctcagc tcatgatgta ttgtagtgct agtgtttcag ctctctcagg ggattgctgg
      181 tcctactata aggtcaggag ttaactactt gtattttagc agtgtcctga tatcaatacg
      241 gctcctatgg aaaccttact tgacgtcatt ttcggatctt tgttactgta gccaagcttt
      301 agtaaaagtc aataagaaca ttagattgtt gtctgtatta ttacttgcca cttcctgcca
      361 gcaatctacc aattcattag cagagagttt tggaaatctc acttgattat ttatgcagtc
      421 aatagcaagg cttgtctgca ttcataattg tttgatttta tggcctcttc tttaaacaaa
      481 cattgtctat ggtaatgcga tgccctgatg gatgggaaag gttttgtctg tgaatatcat
      541 ttagataatt aaaaatgaca gatgaaatcg cctgctgtct tgacctgtac tttgttccct
      601 cagtgatgct gaagagatgc tgattgctgt caatcaaaac ccattggagg tttgtaaatt
      661 ctggctgctg tgaactctga cctccagtgt tgatctgaa
//
LOCUS       KCKM01000617             715 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9776apa ultra-conserved element locus
            uce-6107, sequence.
ACCESSION   KCKM01000617
VERSION     KCKM01000617.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 715)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 715)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..715
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9776apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>715
                     /note="ultra-conserved element locus uce-6107"
BASE COUNT          206 a          122 c          129 g          258 t
ORIGIN      
        1 ttgcaaacgt tccagctaaa caccagaaaa aatacggtgt gtgaaaatat agtggcatca
       61 gattttaatt tgaattacaa aaagataatt tcagccaaca gttcttatgt gtttgaagca
      121 gaaattagaa tttatattac atggtgtcag aaagctctta gcatttataa atgctcactc
      181 ctgcaagtta aaaatcctgg ttcataattc ccactctggg tcttgtgagg cacttttcaa
      241 tcatttctct ctgctaattt tggtgtcacc ctcatttctt tttaaaagat tcattttgag
      301 caaatttgta aatggccctg atgtgttcta caatttagtc aattactgtt tcagcctgca
      361 agcctcctgg gaaacggaac atacatggcc tgaaggtacg aatttcaata attgtttcag
      421 taaagttaga tggatttgta atgctgtgtt ccacttattg aaatgtcaaa taaaactgca
      481 ctttctcgag ctctgacaag cagatttctt aaatttattt attttttttt gtgagggtgg
      541 gagaaggatt catctgctgg gtgttggctg cggtatctgt agacgcagtt ttattaaaat
      601 tggaattgcc tttctttctg ttttgaacct ctgttaataa ggttcctaga ttttaatatt
      661 cagattatca actaatgttt gctgctactt caaagagttt aaccccaaca tgttc
//
LOCUS       KCKM01000618             988 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9792apa ultra-conserved element locus
            uce-2409, sequence.
ACCESSION   KCKM01000618
VERSION     KCKM01000618.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 988)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 988)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..988
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9792apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>988
                     /note="ultra-conserved element locus uce-2409"
BASE COUNT          270 a          223 c          174 g          321 t
ORIGIN      
        1 ggaagtaaac acactttcag ggtagtgtaa cacaactctc ttccctgccg ttcccttctc
       61 ctggcatcag ggtggatgta attcttctca tgcattattg ataggcccaa aagcctgcca
      121 agctagcctg ctttttttgt gacagacaaa ggagggtaca tggatggcac ctctcactgc
      181 tcggggctct gctttcatta agaacatttt ctgcctgttc tccaagggca ccctctgtca
      241 gagactgcca tgcaataaaa aaaaatatgg ctttgaagtc cagtgaatag aaacaaaatg
      301 aattagcgtt caggtgttcc tgcaacctga ttacaaaggc ccaattcagt ggcatccttc
      361 acaccttttc acttgtccct gcataatctc aacacatctt ttaggctctc tgcctttcta
      421 gtccccctcc ttcctccccc catcccttta tttcctaatg cttgcaggtc ctccaggaag
      481 acacaagcac ttacagttgt tgagtgatta aatatttata atcagggcaa tgagtgaggt
      541 gttgaataat aaatgctaag gttgaggcgg ccttagataa tttctgcaga tttcttcatc
      601 tacagactct ttgattctaa ggcaaaatcc ttctaattaa caaaaacttt tttctttgct
      661 ttccttcttc tacttcctct tcttttttta gcagttgtga caggcaatag tcctttatca
      721 ctgttttgtt catgaacctt aaccctgaga cagtgctaga gctgtcatta aaaccttaga
      781 tacacatgca taaaatttat gtggttgttg tttgctcaca tttgggtttg atttttatac
      841 atacaaaaca tacataaaca catttaacca cattcgctca aattcctcta catcaactat
      901 tatttagtca agaaatgaaa gcctgtaata aatggtcagt ctgttattaa agacagttat
      961 agcatgttgt gatggggacg atgagtga
//
LOCUS       KCKM01000619             994 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9807apa ultra-conserved element locus
            uce-7722, sequence.
ACCESSION   KCKM01000619
VERSION     KCKM01000619.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 994)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 994)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..994
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9807apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>994
                     /note="ultra-conserved element locus uce-7722"
BASE COUNT          255 a          176 c          256 g          307 t
ORIGIN      
        1 gtatcaggag ttgggtgtgt gtctttttct aatttatttt ctttttgagg ttcctgccac
       61 tctgccttag tatccaactc ccttcccctc taccctaccc cagttaatag tcaaaggcta
      121 ttttaaggga ctagagtgca gaaatacata tttcataccc cagcaaattg tgaacatcgg
      181 gatttaaccc aagtgtggtt cttttccctg gcaaacgctc tgcaaaaggc atcgtaaagc
      241 ctccttggag ttaggaagtc gctatcgcag ggcagcgagg aaggcagggg gatgggacca
      301 acaggttccc gggtggagag agagggctct gaatcataaa cacgccatag ctttaataaa
      361 ataaatgaag tggagccttt tcagccgagg gcagaatgta ttggggcaag ctgggctttt
      421 aacgttggga gtgaaaattg acaggctgag aactgggaca taaacaaaaa tgtcagtccc
      481 tgggagtctt gttcactgga caatgtctca attgtttccg tgatttttcg caggcagcag
      541 gggatagtgg gagatttaac tcttcacagg ccatgcaggc tctggaggtg ctcgcagaat
      601 gaagaagtgg cagaaaagag catttttttt gtttggaaac gattaagcat gtcagtgggt
      661 gataaggaaa ggtcacagtg ttctctgcgt acttgtctgc tgttcaagtt gggctttacg
      721 cttctttaat tttgtttagg ttttgctgtt tgcctggaaa actttttttt ccccccttgc
      781 tttttatcag gaagaatgag actatgaggc agactggtag atatttaaga agcgggaaaa
      841 gcaggggagt tatgttttaa tttttattag tattcttcat caaatggctg acaggcaagc
      901 ttggatattt taaggttgtc tagattattt ggaacaggct gaaatgtgag gtagggaatg
      961 ccttgttttt tattaactgc tttacagttt tgct
//
LOCUS       KCKM01000620             806 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9822apa ultra-conserved element locus
            uce-2298, sequence.
ACCESSION   KCKM01000620
VERSION     KCKM01000620.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 806)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 806)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..806
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9822apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>806
                     /note="ultra-conserved element locus uce-2298"
BASE COUNT          255 a          132 c          146 g          273 t
ORIGIN      
        1 aaaagctgaa tcagtagctt gaaaaatgtg agttattatt gactggcagg attgggttca
       61 gcataaacaa ttggtctgaa gggaagatct gactcacaga aaccaaattt acaggttaaa
      121 aaaccaaaac taaacattgt gtggatttga ttgagcttta cttcaatgaa gagctgcatg
      181 ttagattttc tacaatgtca tgaattataa tactgaatcc agtgtcatta aattgtagtt
      241 ttttgtttct tgtcagctac aacaatttca gcagagcaca atccgtgtga aagtatgaat
      301 aaaattcagg gagtagcatc aaggacttct gagctcagga aactgagttt ggcagtgcta
      361 atttgtatta aagttgttgt tgcatgacag caggaaaaag atttaatgct tgccacctga
      421 atcaagccat ggaacattgg tttctataac tgccatgaat ttgaatcaag gccaatatct
      481 ctaaatttga aataaactga tactctgtct tgaaagaaga tacaggccac ttatgttgtg
      541 gaaggtattt agaaaatgtt tttttcaatt taatttttag cagtatatat ctttcaaatt
      601 tttaggcact ctagcactag ccttttttgc tttttctata ttccagcaag tatacagtct
      661 ttcagtcatt tatttatcag catccagtct tgaactaaca ctgatttgca caagaccgca
      721 gatgcaggtt ttactcccac tatcactatg cagttgctta ccttaatctg aaagtcgttt
      781 ttcttttgta tataactgca ttaatg
//
LOCUS       KCKM01000621            1287 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9838apa ultra-conserved element locus
            uce-1260, sequence.
ACCESSION   KCKM01000621
VERSION     KCKM01000621.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1287)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1287)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1287
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9838apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1287
                     /note="ultra-conserved element locus uce-1260"
BASE COUNT          249 a          369 c          268 g          401 t
ORIGIN      
        1 tccccaaccg ttctttccag aagaccatcc ttgattaggt tgccgtccac cccacccctg
       61 atccttacta gagctgtcgt tccaagagga agatgatttt tcttctgttc ttcctcctcc
      121 ccaattcgaa gaattggagt tcttatagtc attccatcct ccagtatttt tggggtcctt
      181 ccactccgtt gaggttgaga gctcacccca tccagacttg atttgattgc tttggctggg
      241 tacatcgccc cagccccctg agttctttgt ctgtgtggca gagctctccc acccctcagt
      301 tcctttatca gacttcccct caggccgtgg catctcttca atatcccaca cggtatcttg
      361 cttaatttga gtttggcccc agccagtgtt tgaaagcact cgggggtcca aatcagtcct
      421 gctcagcaga gtctgcaaga ctgcctggca atcaggatgc gttggcctgt acgatcggcg
      481 tccagaattg tgactgtcac tacttcctgc tttgtggttg cttccagtgc tttgacctcc
      541 aacctcactt cccgcagagc tggaagatct tccccaacag ggagcctggg aattgccttg
      601 gttttcaggg agagggtggc ctttttgatt gtcccatgct ccagtgctag aatttggttg
      661 gtttggacca ctccattctc caatcttcag ttcatcagac ccagacagct gtttccattc
      721 tccctgagag accccagatg ttaatttgtt cccttcaccc catttgcttt catttgcatg
      781 ctgagggcca aagttccaag acccaccacc cgtagaccgg ttattgttat cccaagaatc
      841 gcttcttgac ccattaggtt tttgaacaga agctcctttc caggagtcct ctctatcctt
      901 tccattgttc ccatggtttc cagaattgct ctgtccagcg actgtgtcag ttccagaaga
      961 ccccctagct gtaccccaag atccaacact cccagtcttt ctttctccag tgctttgtga
     1021 aggggtgtca gtgctcctgg aagggttccc caagcccatt tcaaagggca ttcccttatt
     1081 ctccataggg tttggtgaac ttaagttcaa ggagttagtg tttccatttt ttggtccatc
     1141 agtgttatga atttgagcct gttctctgcc agagacaaag ttaacacccg cattttccat
     1201 ctttgactgc tgttccctag aggtctgacc tactgtgcta atctgtgcat tggagctacc
     1261 gctatcggat tctgaagtcc ctttcct
//
LOCUS       KCKM01000622             599 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9854apa ultra-conserved element locus
            uce-6779, sequence.
ACCESSION   KCKM01000622
VERSION     KCKM01000622.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 599)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 599)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..599
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9854apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>599
                     /note="ultra-conserved element locus uce-6779"
BASE COUNT          179 a          111 c          145 g          164 t
ORIGIN      
        1 aaaaagcggc ttgacagcta ataggtaccc ctgccatcaa ttgccgagac attttgtctt
       61 ttgtgacatt gcggaaaaga caaggaaggg aatggaagca actaaaaaat gtcaaaagat
      121 caaaaaatca atgggctgaa ggaatgtgat ctgtttatcg gggtgtagct gctctttctg
      181 tttgcattaa gtccgagtga gtgtctttgg tcaccactaa acttgctttt attcactccc
      241 taggagatgt aatacaagca tgaaacgatg gctcacaaag cgggcacagc ggcgaagtaa
      301 ataaataaat aaatgactaa agcaagccgg ggcttcttta aagaccacaa aaccaggttt
      361 actgccttgg cacctcgtat taaacatgct cacctctctc cagaaacttg ttgctgagcg
      421 cagcaaatgg accatgttgt gttgacacgg gtgtcttgtt tctgtgttac tgggaggtta
      481 tttttatgta tttatttttg aaaatgtcaa taaaatgaaa agagggcgag agttcagcga
      541 gcggaagttc tggcagctga ttgaatgcat gtgcttggca cttgacagtt cgcgtcaag
//
LOCUS       KCKM01000623             688 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9870apa ultra-conserved element locus
            uce-2909, sequence.
ACCESSION   KCKM01000623
VERSION     KCKM01000623.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 688)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 688)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..688
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9870apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>688
                     /note="ultra-conserved element locus uce-2909"
BASE COUNT          234 a          140 c          122 g          192 t
ORIGIN      
        1 cagtaataac agaagcgcag ctataagggt ggaactagtt ggttataatt ttcctataat
       61 aaagaatatg ctttattcca ttatttcaca taccctgaga tgtgatgttc aaaaaggaaa
      121 tacagatcta ctgtgcagca tgcaaatata atagtaaaaa aatgtcagta ccttatctgg
      181 ccaccactgc aagtcttctc ctaaagaaac aggactttga acaggtgtat tcttcttgtc
      241 caggtttggt tccccctcct tacttgtaga gcctctttca ttatcaaatg aggctccatc
      301 aagccacctt ctttcacgca aacgtaaaac ggactcacgt tcacgcaaca gctcagagtc
      361 tctctctaag ggaagaagga gaactggtat gcaattgggt cacaccagtg ggataaaagt
      421 aagccactct ctagtaaaga cccttcagga tgcaactaac agcagttaaa tctactcaca
      481 cagattaaaa ataaagtcct gacatgcaac attcagtata ttaacccttt caagcatatg
      541 tactttggaa cgcaaatgta agctagaaat aaagaagtct tgcagttttg tgcactgtta
      601 aaaatgcgaa atcatttgca catcagaaga ggccaaatac atttaacatt gcaatttaaa
      661 gttctatagt acaattaggc agagtttt
//
LOCUS       KCKM01000624             692 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9886apa ultra-conserved element locus
            uce-3911, sequence.
ACCESSION   KCKM01000624
VERSION     KCKM01000624.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 692)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 692)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9886apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>692
                     /note="ultra-conserved element locus uce-3911"
BASE COUNT          242 a          111 c          121 g          218 t
ORIGIN      
        1 acatcttcta gacttgtttt gtcatggaag tatatttgaa catatgtgaa aaaagtgcat
       61 tttcaaatat gtggctgatc acaaaatagt gaaagtggca tgcagggggt taagggaatg
      121 atgaggcaaa aaactacagt gccagcagaa ttccccaaag ggtaaacaaa actcttaact
      181 gttgcaaaca ataaattgtc aataccttgt agaagcagtg gataatgaaa agttataatg
      241 cctatagtta gtaccctctt taaaagaatt tacacaggat atgaaattaa attctgtgca
      301 cagttctctt aatttgccct taattaaaca atactccata aatggtgcat tcagtgacca
      361 aatgttcaga gacagcaaaa tggtgggtcc caagccatta ggaatgaaat aaagtcagtc
      421 ccccgagagc ctgctagaat ctggtctatc taagtgacaa ctgatggttt aggaaagata
      481 attaactttg caattacaaa ccacagcttt caccaatgct gcttctttca gtattctctt
      541 ctaaatgttc tactcttttt acagtgagat aaaatgcttt ttaaaaatgc tgagttcata
      601 gggattcatt tttcctacac aaatttaatt gaatatttta ttttaaagat ttcaggacat
      661 gtatatgttc agttatttta aaaattatga aa
//
LOCUS       KCKM01000625            1027 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9915apa ultra-conserved element locus
            uce-3096, sequence.
ACCESSION   KCKM01000625
VERSION     KCKM01000625.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1027)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1027)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1027
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9915apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1027
                     /note="ultra-conserved element locus uce-3096"
BASE COUNT          268 a          187 c          205 g          367 t
ORIGIN      
        1 tgcttgtctt ttaagtttct tgccggtcct ggtcaagctc aatgggatga agcaaatttt
       61 tatatatgaa attatttaaa cctacaggat tttttttttt cccctccagt tcttaaatat
      121 gtggaagcag ttcatcctct gtcatgctgc tgtgaaaaac ttccaggata cagagttact
      181 tttcaaaatg cttatgttta ttttgtttaa ctgtacgtac tctccaggtg ctacgtttaa
      241 ctcctttttt tcttctttag atctctgcag cgattatatt tggaaaaact gtatatctga
      301 acacttaaat gtgtgtgagt gcaagcagtt ttacatttag attttctctt cctgtttaga
      361 taacaaatct cactttcctt gtgtgcttgc actataggtt tgggactgac aatagctgac
      421 taacatgtcc tgagctgtga gagggcatag caagaaggcc ttcatgcggt aatgaccctt
      481 ttcagagaca atggtcatca tggattatgc gtttccaatt atttgttcat ttatttcttt
      541 ttatacatat ttctaaatta ggaacctcac tgcttcatgg cagttggttt gctattgctt
      601 ccaattctgt taggatgcca ttctgtacta gaggattttc tgtgatcatt tttagatagg
      661 cagtaatgta gctcttaaat gatttaggcc acagggttgg gtatgatgat acgcagttgt
      721 acattcgcaa aacggagtat taaatgtagt ttgagaggac ttctcagctt tgtggcattt
      781 aaataaagta cgagatcata ccatataacc agcctgtgta aggggatttc ccgttaatct
      841 cttctttgac aggcccttac catccagatg gctgcaggat ttgtatgagc ctgcatgcgt
      901 ttatattaag gcccgttccc tatctgtaac gtactgccaa atccaaaggg cgcagagttt
      961 gaagtttcct aaggaattgt attagagtga gacaagtaaa ctttcataat catgagactt
     1021 caagagg
//
LOCUS       KCKM01000626             903 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9931apa ultra-conserved element locus
            uce-2034, sequence.
ACCESSION   KCKM01000626
VERSION     KCKM01000626.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 903)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 903)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..903
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9931apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>903
                     /note="ultra-conserved element locus uce-2034"
BASE COUNT          282 a          130 c          160 g          331 t
ORIGIN      
        1 attaataagg tataatatgc aaagcagagt aatttcaaac agcttgtaat gtctctaatg
       61 tactttcttt ttttttttac ataagggcta tattcattat gtggttatga taaacatact
      121 aatgaatttt attacaggaa caaatttaaa catgtaaatg agatcaaata gtattaaaat
      181 gcaaacgatg gtgaaactta ttacaaacta accttgccag catacatgga gggatgttac
      241 aaaaaggact cgaggaagtt gcatgcttga tagaaaatca tgacagtcat tttacaaagt
      301 cactgaacac aagagtttgt gaacgcttca tttttagtgt tgtataaact ctactgaaca
      361 aaaagttaac tggaatactg ggtttgcacg taactttggg tgacaattaa atcccttttc
      421 ttgttccagt gaacagtaat ctgtgcataa ttacattcaa atgagatatt agcatttttt
      481 gtgcttactc tttgttaatt gcagagttca ctcaccatgg tgatgctttt gatagaatca
      541 agcaacctta ttgacctgat gctgcaaggc atgtttggaa attctgcagt attcttcttc
      601 ctttttttat tattattttt tttattttgg cattttgaag agtcctgctg cttttattac
      661 attcctgaca cttttgttaa taaatcattg caaagttaat gaaaattgca ttcaggcata
      721 tccaaaataa ttgtgtcctt tgtcatgtta ataaattgaa atatgttgat ccaatgggtg
      781 aatgcgtgcc cattatggtg aagtttgtga tatgtgtgcc tgttgcactt gtactttctg
      841 gcttggcata tcattccatg tagaaatgtg tatggagaaa acaaaagtga atatgtttta
      901 ttt
//
LOCUS       KCKM01000627             498 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9947apa ultra-conserved element locus
            uce-7648, sequence.
ACCESSION   KCKM01000627
VERSION     KCKM01000627.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 498)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 498)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9947apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>498
                     /note="ultra-conserved element locus uce-7648"
BASE COUNT          155 a           95 c           89 g          159 t
ORIGIN      
        1 taataataat aaatgttaat caaaaaactg catgtgtctt tctgattgtg ccagtgttgt
       61 ggtattcaat tatgcaattt tcattggcat attaatcatc ttttcaacaa acaagccggc
      121 gttaattaaa gcaaaccatg gataaagaca tgttgccgga tcatcattcc gtttatcaca
      181 gcacacaggc tggccgttaa gtaaattctg gactgtgaga tgaatttcaa tgttggcttc
      241 atcttttttg ttgaagtttg aatgcagctc atctactaac aacaacaaac ttcaggcttc
      301 ataagagaaa gatgaattta tttgtaatta atggtgaaag aagaaagata aagtagttgt
      361 atggttctga tgggaattcg aatatttgga accacaccat tttaaaaaat tccttcctcc
      421 ttcccctgct ccccctcttt ccctacttga agtgtcagag ccctgagagt gaggaataaa
      481 tgaaccctcc tctacctg
//
LOCUS       KCKM01000628             505 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9962apa ultra-conserved element locus
            uce-5820, sequence.
ACCESSION   KCKM01000628
VERSION     KCKM01000628.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 505)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 505)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9962apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>505
                     /note="ultra-conserved element locus uce-5820"
BASE COUNT          149 a           94 c          102 g          160 t
ORIGIN      
        1 tgcagatgtt ggcactttta aaatttgcat tggaatctta tttcaaccac caagactgac
       61 tttcaagcaa cagtaagcag ggtatagtta accactgaag cagaaatcta gagtcaatga
      121 gtaattatta agagctttcc agaatattag ctgtttcagt tgctgcaatg atggaatagt
      181 ccattagata tttctgtttc tagcaactcc tgagaattga ttctgatacg aaacaacgag
      241 ccgttttgat caatactgta attactctta ttgatggatt gttttacaat gatagtcatc
      301 attgcagtat gtctgctcag gaggcatcaa gactgtccgc tgcatgcagt aatgcaccac
      361 aaatatctga ttcaaatcaa cacactattg agactgggct gacaagcgtg aaattaattg
      421 ttccacttca tgtaagacct gcattcttct tttgagagag taatttgttg ctgtgtgtac
      481 cctgggaaca gtgcagcctt ggtgc
//
LOCUS       KCKM01000629             844 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9978apa ultra-conserved element locus
            uce-7248, sequence.
ACCESSION   KCKM01000629
VERSION     KCKM01000629.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 844)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 844)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..844
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9978apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>844
                     /note="ultra-conserved element locus uce-7248"
BASE COUNT          285 a          158 c          149 g          252 t
ORIGIN      
        1 aagtaagtca cactataaag gttaacgatg ccgttcttga ctgccttaag cactaaacta
       61 cacagaacaa ctccagtggc tatgaagcaa atcactagag gtcaaccaaa gctggtgatg
      121 gtgaattcca agcttgacct tctgactttc gcagagcagg ctgtgtttac ccccagatgg
      181 cagacaattt atatggtaca ataaccataa aacagataaa gatttttggg ggatattact
      241 ggttagcaag catcaggttt tatacttaac ggaatatttt tttatcaaga tcaccgtttc
      301 ttcagaaaat aatgacagat tttaatatca aagatgtcag gaatgaagac cacatggtta
      361 ttgtgagaaa taacatttaa cctttctctt gtggctgatg gaggccaatg cagtatttta
      421 ttatcaacat tggcaggtaa tttattacca ctgtttctac tccagtaaaa ccacattagg
      481 ctctgcttga tgtatcattt gttatcttca aactccctgt acactttctg catgtgtaat
      541 ctctctcttg taactcactt caacagaaaa tggtaaatat ttaagtcatg attctggatt
      601 catcaaaagc tttgggactg aaatacagta gctaaacaga ttgtgccaga caatccttga
      661 tgccaacata aagctgacat cttgcaaaga gtgatgtaat acatctgaaa cattaactgt
      721 gcataatagt gcattaaagt agattcagga cagacagaaa aataaatcat taacagactt
      781 caaaggagaa tcaaatttta cagtataaat tcaggtcagc tatcacaacg ccatttgcct
      841 atgt
//
LOCUS       KCKM01000630             816 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 9994apa ultra-conserved element locus
            uce-7975, sequence.
ACCESSION   KCKM01000630
VERSION     KCKM01000630.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 816)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 816)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..816
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9994apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>816
                     /note="ultra-conserved element locus uce-7975"
BASE COUNT          205 a          198 c          195 g          218 t
ORIGIN      
        1 ttctgctcac aggactagga accaatgcac gcccgtttcc gaaaccgccc ctctatgcgg
       61 aagtacaggt ggctgctgtt acacctaatg caatcacgat ttgtttctcc tcccgtttaa
      121 cagcctttgt ttcgttttgg tgccgtgtac atgaacgcag tgtctaggac agatgtgcta
      181 ccttttacac tgttgctata gaactcttta gctgtgaacc cttaatttgc agctggaact
      241 ctaataatca gtgcatagta tttcaatagc cttttgctta tatgtttgaa gattcgaaac
      301 tgaatggtga ggtggccaag gcggcgctgg caaacgaaga ctgtccccac atagaccagg
      361 ctattacgcc cgatgagggc ctgcccttta cccgctctgg cactcgggag agatatggac
      421 cctgcttcct cttatcaacc ggggaatatc cctgcccgcc tgatggagga ataagaaagg
      481 gtatgtagct ggggtcctgt aaccacgtag ttagcaaccg tttgaaataa gtaagagaga
      541 gtcagctgta gctgtagcac gcaatagtgc gcttgctgta gaaatgcacg tttgggctgg
      601 aaaccaccac ctgatgtctg catttggagt ttctaaccta tttctttcag aaagaaaagc
      661 ctgaggagct gtaactaccc catagagcta tgctaggcag tcgagtcttc caccccagct
      721 ggtgcagtaa gctttagtgg aggatgctct gcaatgacct taaattagcc catcctccaa
      781 ggagatgccc attaacactt catagcaatg aaggtt
//
LOCUS       KCKM01000631             514 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10010apa ultra-conserved element locus
            uce-3421, sequence.
ACCESSION   KCKM01000631
VERSION     KCKM01000631.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 514)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 514)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10010apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>514
                     /note="ultra-conserved element locus uce-3421"
BASE COUNT          125 a          121 c          111 g          157 t
ORIGIN      
        1 cagacgttgc ttttcacgac aagcagccac cgcagacact tccagggatt tttaatgaat
       61 tggccgccgt tctccaaccc acttatttgc ctcctgcagc cccccctgcc cccgcctctg
      121 ccagtccttc ccctccctgc tcccatcctg gctgctccca ggcagcgggg agagggagag
      181 aggaattatt tattgtgtgc ctgttgaaaa tgaaaggctt ttacatttta atgagcacta
      241 aataggagcg aggaaatatt gttcattagc tgtaatctgt ggaattgctt gagtgaactt
      301 cctttggagg ccgctttaaa cggttcactc aagtaaagca gtttgtatgg taattaaggg
      361 agcatttttc tgtcaacatc tgtgctgcta tttataacgc tgaaggtatc ttattactcc
      421 accagagaaa cattaaatag ggtgggcaga ggggaggttg tattttatat atgtatatat
      481 tattactgtt ttccatcttc aaaacctctc cctt
//
LOCUS       KCKM01000632             488 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10026apa ultra-conserved element locus
            uce-5697, sequence.
ACCESSION   KCKM01000632
VERSION     KCKM01000632.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 488)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 488)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..488
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10026apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>488
                     /note="ultra-conserved element locus uce-5697"
BASE COUNT          129 a          116 c          110 g          133 t
ORIGIN      
        1 gagcaagcga gcgggcgagc gagcgaggca tgtctcaaag ccagctaagg actaagatgc
       61 cacacttcgg aaaggctgat tgaaaacaga ctcttcttaa gttttagagg attttctccc
      121 tcactccctc caagggctaa gaagccgatt tgggagtttg aagggaatgg gtttcagcgt
      181 ccatatttgt tctggtgcac ttgtaaaatg cgatttgaag aggatcttta gccctctgat
      241 tgtctttgta ttgtttttct tgaaacggat cttttgccct taatgaatcc ccacacagct
      301 ggacagctcc tgctcggaca ctgagagcgc taaccccaaa ctgaccccaa tttgacacca
      361 caagatgaaa ttttaccgcc tgttaaaacc atttccagcc tcggcaaaag gagctggctg
      421 ttgactgaga tgcacttcca taccggacac ctcatttctc tttggacttt tgagtcgata
      481 ttaaaaaa
//
LOCUS       KCKM01000633             464 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10041apa ultra-conserved element locus
            uce-1695, sequence.
ACCESSION   KCKM01000633
VERSION     KCKM01000633.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 464)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 464)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10041apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>464
                     /note="ultra-conserved element locus uce-1695"
BASE COUNT          154 a           88 c           87 g          135 t
ORIGIN      
        1 aagctaaagt aagtccccac tcaacttttt agcacaagga ggtttacttt tagagcagtc
       61 ttagaaataa aatccaacat atgccatttg actgctgcaa actaatcctc actctgtttc
      121 tatttttcta tgaactgcag tccaatgtcc aatagacagc ctcgatgcat ctcaggtcca
      181 gtacatgctt ttcaaactta atcaagggaa tatagaaatg tatataaaaa gatgaaagtg
      241 tctttgcctt tatacttatt gcaaaaaaaa aaaaaaggca aaaagctgga ggaaaaaaag
      301 tgagatgttt cataggggaa ggttaagtct gatgctaatg cttatttaaa atggtgacag
      361 tctggagtag tgaagccttg ctgggctgct ttaatttctc cctggaatag ctctctccca
      421 accttcggca gcacatcaaa gtctctggag ctcaattaaa attg
//
LOCUS       KCKM01000634             602 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10056apa ultra-conserved element locus
            uce-2502, sequence.
ACCESSION   KCKM01000634
VERSION     KCKM01000634.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 602)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 602)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..602
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10056apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>602
                     /note="ultra-conserved element locus uce-2502"
BASE COUNT          159 a          115 c          105 g          223 t
ORIGIN      
        1 tgttagacat gcactaacaa acacatattg gtgtatccaa gcagtattta attacttttt
       61 ttaaaagttc agaaaagttg ctgtggtttg tttggagctg tatcacactt tgctgaagtc
      121 tccagggctt accgacgttc ttgacttttt atgaatgagg ccttttttta ttttccctgc
      181 atttgtttag ctctttacct aattgatttt ctgtgctaat acactaaagg tctgaagaag
      241 gcagagcctc aggtgtgaca gatgaaataa ggtgctctta gtcattgctt ttatcttcca
      301 tgtctaatgt gttggttaca gctgtgcagt ttaacagcaa aatcaataca tcatttgctg
      361 ctggtacctg aacgaatttg gaagcctgtt ggtattttaa ctattaggat tcctctgaaa
      421 gaccttcctt cccctgcttc cccctccacc ttgtccttct caaaataaaa tattgcagga
      481 acacaaaacg actttttgtc tcctggtgtt tatgtatgca tgtaaattta ttaactattt
      541 acgctattgc tagttaccta aactacattc ttggaaattg aaccttatag ttgatttatt
      601 aa
//
LOCUS       KCKM01000635             366 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10072apa ultra-conserved element locus
            uce-1174, sequence.
ACCESSION   KCKM01000635
VERSION     KCKM01000635.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 366)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 366)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10072apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>366
                     /note="ultra-conserved element locus uce-1174"
BASE COUNT          104 a           65 c           64 g          133 t
ORIGIN      
        1 acctaaagct ttttaacaaa tcgatgcaac tatttgtaat tgcttgtttc acaagattaa
       61 aagtactcag ccttgatctt cgcccacagt tttgtggcca acatgacctg tgcttccgtt
      121 gtaaaatagg agtgttggtg atcagcacct atttccatca agtaatccat attgctaata
      181 tttctggaat tttaatgtag ttacaattta tagccgatca aatgtggtta cctaaattgc
      241 tgttgctagt agacagttta actgtcttta ttaattacag tataatttaa tgtttgagta
      301 caggcacttg tgttggtcat ttttacagcc aaagcagtta tgtgccttat gacgaaccat
      361 tttagc
//
LOCUS       KCKM01000636             435 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10088apa ultra-conserved element locus
            uce-7443, sequence.
ACCESSION   KCKM01000636
VERSION     KCKM01000636.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 435)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 435)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10088apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>435
                     /note="ultra-conserved element locus uce-7443"
BASE COUNT           66 a          170 c          117 g           82 t
ORIGIN      
        1 aaagcccacc gccgagccgc tgcagcccac tcaggggccg cagagggtcc ggccccgggt
       61 gcctgcccga cggcagcccg gatctccgcc gtgtgtcccc ccaggagtgc cggtgccagc
      121 cctcttccag caccacgctc acgccgagct gcccgggaag cattgccgcc gccgcaaagc
      181 ccgcaccgtt ttctccgact cgcagctctc cggcctggag aagaggttcg agatccagcg
      241 ctacctctcc acgcccgaac gggtggaact ggccacggcc ctcagcctct ccgagaccca
      301 ggtaccgggg ggcagcaccc cgccgggaag ggctctggca ccccgcatcg cctgcagcat
      361 ccccatcttc gcttttttag tctttattcc tttttccttc ttattttttc tccctgctca
      421 ggtgaaaacc tggtt
//
LOCUS       KCKM01000637             699 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10104apa ultra-conserved element locus
            uce-678, sequence.
ACCESSION   KCKM01000637
VERSION     KCKM01000637.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 699)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 699)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..699
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10104apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>699
                     /note="ultra-conserved element locus uce-678"
BASE COUNT          211 a          128 c          152 g          208 t
ORIGIN      
        1 caaattttcc tgactactcg attagaaaat gcaccaagta caggcgtcag ccgagcatgc
       61 attatttaag tggttggtgt ctggcgacaa tctggaagct gcaattgttg tggttgcccg
      121 taggaaaatt cgcactttct gggagaaatt ctttcacctt tgtgtgccca cagcatggat
      181 ctctcctcat ggcagctgta ggatacactg gaactttgtg acctggaaaa tgtgggacaa
      241 ctgacacaag gtgaccccct gaatgctagg gtaggcccaa ttaatttaaa attttgcttg
      301 gccttgtctc ttccaatttt ctaaatcctc tggaaaaatg attaatgcgt acactgccaa
      361 tgtgaaaata tttttgaccc tattaaagtc gaccaagggt aaaccaagtg taggctggca
      421 ttgtatcaaa ctagctttat taaatttgat tggaggtttg tatgaggaag ggacagacaa
      481 ggacattatt ttgcacagca actccctttt aaatgaaaat actgggggga atacaaagta
      541 ctggttcgta ttggaaccga gctgtattta acatagaaaa ttccaaccaa aaaagtgatt
      601 atttctgaga aagcttagta ttttctccct gcggaagtta tattgtcagt gaaattgatt
      661 cattatacaa agaacgttgt ttctcctgaa aaaggaaag
//
LOCUS       KCKM01000638            1111 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10120apa ultra-conserved element locus
            uce-3970, sequence.
ACCESSION   KCKM01000638
VERSION     KCKM01000638.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1111)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1111)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1111
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10120apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1111
                     /note="ultra-conserved element locus uce-3970"
BASE COUNT          325 a          206 c          190 g          390 t
ORIGIN      
        1 gaagccatgt gatggcagca tttcatacat atttgcattt aaacctgtat aaaatggtca
       61 gtaagtattt aaagttgtga aaagtagtga aggttactga agtgtcacag tgtctccaag
      121 tatgtccaaa tttaacaaat ggaatacttc acagttcagg tgttgcaagc tgccgttctc
      181 actttctcac tacgggatgt tttataatat gctgaatata tcattacccc catcatctga
      241 aattaagaat ttaaatctga cttttgtcta cacatttgca ttgataccat gtttctgtta
      301 attcagtcta agatcccaat tttttttgca gcttggagct gcttcctcct tttaaaactc
      361 cctgttgcac atttcgcttc tctttggggg aatgaaaata tgcagataac ttttctcagt
      421 gtatgtttgt gtgtggggct aatctagcta ttactgtctg catcacttct ttctttttcc
      481 cttctctttc tcttctttcc ccaagtatag gttactctaa tcttagcttt gcactgtgtt
      541 ccagatgcgg caggccagaa ggctgtcgaa tccttgtata cagaggtata catcaagaac
      601 tggtgaatgc agcacgtatg tgggctctca tgtaaacttg ccttctcaac agagggctag
      661 ggctagagac taatttgcac tataaaaaat aatgctacct gttgtcatta ccattactga
      721 aaactaactc ataaattaca tcgttcgctt acaggtttgc actgtttttt ctcttacttt
      781 tgaaataatt ggaaattaaa agtggcaaaa ccatgtgttt atacttcaaa gcatactata
      841 catttaaatg taagttacat gatgtcattt taatggggaa gtattaaaag taatttgcat
      901 gagagttcat atttccactt tttactttcc attttttgaa actgcgcaaa agcaaaatta
      961 aatttaagct acccacaaac taatacagat gcgtgcacac gcacgtcgta actttttaat
     1021 aattggaagg ataatactgt agcctgattt gcatggctta taagtctctg catgaaatta
     1081 ttagttcaaa tgtagaaaca ttataatcta t
//
LOCUS       KCKM01000639             691 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10136apa ultra-conserved element locus
            uce-3242, sequence.
ACCESSION   KCKM01000639
VERSION     KCKM01000639.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 691)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 691)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..691
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10136apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>691
                     /note="ultra-conserved element locus uce-3242"
BASE COUNT          196 a          115 c          126 g          254 t
ORIGIN      
        1 tttcaactta taatttactg tgtatcaaaa agcatacatg tattaataat tacctgctgg
       61 tgaaaataac aaagtgtgaa cagtgtaacg ttgtggcatg gatttttcct tgttttataa
      121 ctcctgtatg tgcacgcact gctcagctgc tgtgtaaatg tttttaataa aattattcct
      181 cttctgtcag agttgctaaa ttctgtatat aactgaaaca catgtattcg gtgcattgtt
      241 atacatactt tatagtatct tcatcttctg tgcgtggctt ccttttgcct acaagtattt
      301 gccctagctg ttttctactc tttttccttc acctgtcctg aatattgcca tgactgtttc
      361 taatttaaag ccagaggagt cagtggctga ttagaagaca ggaaattgga ggattaaact
      421 gtctggttga acttccttta cttatcagta ctgtgtaact tgcactggat tagaaactgg
      481 ttgggacagt ttctacaatg tatcagtact tctgttttct tagattttgt ttttctggca
      541 aaaataggga aaacaaggga aaggggtagt ttgtggctaa aacccaataa tttttaataa
      601 cactgaagca ttcgaggctt aaattaaatt tgtataaatg gctacaggta tgcgaattca
      661 ttccatttta aatcatgcac gtctataata t
//
LOCUS       KCKM01000640             587 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10152apa ultra-conserved element locus
            uce-5055, sequence.
ACCESSION   KCKM01000640
VERSION     KCKM01000640.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 587)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 587)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..587
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10152apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>587
                     /note="ultra-conserved element locus uce-5055"
BASE COUNT          170 a          112 c          127 g          178 t
ORIGIN      
        1 gaatctttcc agtcatatct tcaattcaaa catcagggga aatgcttcag aatcagagat
       61 ttatgaattc gtagtaagca gtttcccggc atgtaaacaa atctcaccgg gctgttttag
      121 gaaggtgggt ttgggcagcg gagtaatcat ttttattatt ctgattttcc aaatagaaat
      181 ggacatatat gataaaaatg tcaggcgcgc tctccacgtc aggctcctaa caggattaca
      241 tgtcagctct taatgtctcg ctctgttttt ctttgccatg aatggctgca ttattgctca
      301 caggaacttc actgtaatat atggtaagag acaagtagct ctttatggcc agtgattatt
      361 cggtttgaat gaaacctgtg atttatgtcc atttaactga aaagccttgt aaattcccag
      421 tgctgcattt ttcctcaata gagaatgagt caagcgaaaa tgacaactag gttggcgtgg
      481 aaatgtgcag tgcatcgtcg tgttatattt aatatacctg acatgaaaaa cgtgcacaca
      541 ccacgcagtc accttaagta ggagtgagag tgacattagc cggtgcc
//
LOCUS       KCKM01000641            1045 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10167apa ultra-conserved element locus
            uce-260, sequence.
ACCESSION   KCKM01000641
VERSION     KCKM01000641.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1045)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1045)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1045
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10167apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1045
                     /note="ultra-conserved element locus uce-260"
BASE COUNT          353 a          171 c          205 g          316 t
ORIGIN      
        1 ataaggtggg gctgtttggg taacaggata tggtgtcagt tattttgctg ataattaacc
       61 aagcacctaa atgaaagaag actatttgtg gcatccctta taaaaatgtt tatctttata
      121 gatttgttga ttatagttat tttattctgg taggatgact tcggaaaaag aaaagccaat
      181 actcgagtat ttttacagct aatgagatga gactgaatac agtggagaca gaaatataac
      241 tgaaaatagc attcagtact agctcgagtc tgaatacata tttgtaatac aagccacagt
      301 ctccttcaca tttgcagcat aaaaataacc ctcgaacaga aacattaatt gaacagtaac
      361 tcagattaat gttttgtaat attagttcac aattattact ctcagctagg gtcaagaagt
      421 atatagttgg atattcacaa agaaatgact gatttaaaaa caaagagctc taatggaatt
      481 caatagtgct tttcagtcat tccagttggc atctctatta cctgaaatga ttcacagtcc
      541 attatgggag cttccatgct aatagaatgt ctatcttctg taatacagac acatcagggc
      601 actaactgag aatctgtcac aatgaatttc atctagattt cacttcatct cttcatggac
      661 tgtaaaattt gctcttgtac aatgcctaaa tttactgtgg gtaattgaga gagatctata
      721 gttgcagcac acggtaaaaa gccgttttcc aaagatctat tgtaaattgc acagatttgg
      781 ttcagttggg aacagattat gaagcgccag gcgctggtat ctgctaatta aatggttttg
      841 gggagctctg aaaatatttt gaattgacta cggtgaacag aaatgtgaaa acagcagcct
      901 ggttaaaatg tctctcttgc agccagaaag gcaatgaaaa agcttctgaa atttaagaaa
      961 cccccaaaag agggaggcaa atgagtgaca aggctccatt accctttgta agacttatgg
     1021 atgatatcaa gtagatctgc gatat
//
LOCUS       KCKM01000642             628 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10183apa ultra-conserved element locus
            uce-197, sequence.
ACCESSION   KCKM01000642
VERSION     KCKM01000642.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 628)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 628)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10183apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>628
                     /note="ultra-conserved element locus uce-197"
BASE COUNT          234 a          107 c          112 g          175 t
ORIGIN      
        1 atgtgttaaa tcaccaccaa agtaaagggt gtttgagaaa ccgtaagggc agaataaaaa
       61 ttttttaatg aaaaataaca tgtcagttaa taatagagct gacctatgtt taagagagaa
      121 attttaatca tgtgcatatt aaatattaat aacctattct gttattgtta taataaggtt
      181 aagtaagctt ctccatgctt aaggaaagag aaaaagtagg aatatgtaac agtgaaaaaa
      241 agcaccgaga agcagagaca taaggaaaat gtgtcaacaa taaacaagag gaaatgagaa
      301 agaaggaaaa gatgaaggtg gaaactaatc tctatgtgtc attatgactg ccagagtact
      361 ggcaaagaag cagcatcctt ttatttcaat tttaatcatt tctgaatttt aataccctgc
      421 tccttttgta attctcctgg cattccctat atgcatccat cccagccaaa acaccagtgt
      481 aaattaaatg gcacgcaacc acaccactga tgtagttctc ccagtagaac ccattgagtg
      541 accaaaaagc agagaaggta tgactacttt gtgtccccat agaccactgg ccaattaagt
      601 gacttaatgt tcttcaattc ctttaatt
//
LOCUS       KCKM01000643            1009 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10199apa ultra-conserved element locus
            uce-4295, sequence.
ACCESSION   KCKM01000643
VERSION     KCKM01000643.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1009)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1009)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1009
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10199apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1009
                     /note="ultra-conserved element locus uce-4295"
BASE COUNT          290 a          236 c          188 g          295 t
ORIGIN      
        1 tattctagct tgtgtcctgc aatctcccac atccattact tactgctctc tttctccaag
       61 catacatttg ctgtcaacat ctctcatgct ctaggaaatc tatagaggac aaatgctgag
      121 cggcagcttc taaccctttc tcacgaaact agcttagtct ttgttgcact gtatttactt
      181 ctgttttcca atactaagga aaagcaaaca atgtagaaaa cctttaattt cacatttttt
      241 cccagctggt aaaaatgata gctagatatg cacacatcag tataatcatc tcctaaacaa
      301 atggcacaat gacaaactga gggggcgggg agagggggag cagagcacaa gctggtgttt
      361 tcaatttaga aagtatgcat tatttacact gccattattc cactcaattt gagttcacgc
      421 tttagtccta atttcagtat aatcaaagtc aatgaatatt taatcagcat tgcttccaga
      481 aattgagtaa tgccattaac ataatgtccc caggacttca atgccgattt tcctcaaaag
      541 catgggactt ccactcttcc tgcccttccc ccttttactt taaccagttg atgctccgat
      601 ctccaccttt gcagggttta acaaggtgga acgtgtccaa aatgcaggga atggggaaac
      661 cgcttcccat ctgtggagat gtctcaccac ccatattgat ccagccccag tatagttaat
      721 aaaagtagag cgttttgctt cagtatggct cagtatggaa aagcattgta atagcaataa
      781 tccatttgca cttctggagc acctttcaac agaggggctc gagtcattct gcaaacatta
      841 attaatctct cccactcccc tgcaaggaag acacttattt atgtgatagc taatctacag
      901 ataggaaaat cggagcatga cgaggttaag tgcctagttt acagccaccc gggaatccag
      961 caacattcgg gcagaagtct ggagctctga ctggctccaa gtttctttt
//
LOCUS       KCKM01000644             975 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10215apa ultra-conserved element locus
            uce-1899, sequence.
ACCESSION   KCKM01000644
VERSION     KCKM01000644.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 975)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 975)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..975
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10215apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>975
                     /note="ultra-conserved element locus uce-1899"
BASE COUNT          315 a          195 c          140 g          325 t
ORIGIN      
        1 catttatatc tgattctgga gggcaagctt tatttcccct tcttccaaat acaagagtga
       61 aagaaatcta catttaaaaa aagaatgtaa accttttgtt aaaacccttc agctttcata
      121 ataacagtaa aatcagattt taccatctat gtatcaaata cataaaagtc ttttcatgaa
      181 ctgctttagc aacattacca tatcatgaaa ccacattttt atgtgttttg gttttgactt
      241 ccataccgaa atctagctga tgggcaaagg gaaggtacac atatatatta aagttgtgtc
      301 agtattgcat tttatagcaa ttaaataaac attagacaaa tttcttccac cctttgttta
      361 gttatatggg gctcagctgt gttgcttcta accctaacta catcacttca aattaccagt
      421 aaattaacag agtaacactt tcaacctcag agcagatttg atccaaatag tctttaaatg
      481 ccatttctgt tcctattaac ctaaagatcg gcatagcaga tattttcgta aggctgccca
      541 gcaatacagg gcattaatgg ctaagttgtg acagcacttt tcatgatgat ttatgattca
      601 gtgtttaact tgattactcc actgctgact ctgaatacta tttcaattag tgcacagaag
      661 gtcacatcac aaatattcct ctataatcta ttcctattaa cactaataca cagagtaacc
      721 aaatcttttc acccttgttg attcatacca tccatagcac taactacagg cttgtttacc
      781 agtttactgc tctggacaca tccgaaatgg taattttcag tcctttgagt atcattaata
      841 gctgtaccat gacattgtga ataaagcatc cctctgctgc tgtgcgtgca ttaataatta
      901 tcaaaggctc agatatttta aatggaaggt gcatttcaaa aagaactcct gtctaaatca
      961 ttatttcaca gctaa
//
LOCUS       KCKM01000645            1051 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10230apa ultra-conserved element locus
            uce-6885, sequence.
ACCESSION   KCKM01000645
VERSION     KCKM01000645.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1051)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1051)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1051
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10230apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1051
                     /note="ultra-conserved element locus uce-6885"
BASE COUNT          334 a          183 c          171 g          363 t
ORIGIN      
        1 attatgttat tttacttagg aaaaagtcat ttttttaccc ttttccatac caaaaaaaga
       61 taaaatccta tgtaaataat acgtgttttt cctgtaatga atgttccttt cattctgcat
      121 ttctgtataa tattggaaat tgtgttttta ttagaagagg cattggatgg aagccaacaa
      181 ttttttcttt taacttgata ttttgggctc tgatctttgt taaaactaca atggcatgta
      241 tctagtacag tcagaggtca tttctatagc tactaccatt tcctatcatt tctggggaat
      301 gtttgttttc aaaacaaaga attgggttaa agcttaagta tcatgtttca gaacatattt
      361 caaactgaaa ttaagaatgc taaaaccttt cctttaaagg tcagatgata tttattatta
      421 ttataaaaat gatctgtgat ttatgaattt aacttctcgt aaacctcctt tgtaacagaa
      481 tatgcagtca gaagcttaac attacattgt tttcctttga caacgtatcc acgagaccac
      541 tgcagctgtt cctttactca caatagcaga ttaattaaca caatcatatg ctgttggctc
      601 ctactcaatg agtaggtctg cagtgggata gataggtaaa tcctttaaat gtgtatgaga
      661 taaaggatat actatagtag tttcataact agccagtttt gcttctgact agtcagccct
      721 atcagcaatg gttcactgac tacagaagct gtgagcttac atttcaaagg cagccacacc
      781 tattacagag cagtaatgcc tgaatcattg caaaactcaa atatgtaaaa gcacgggaac
      841 gctcagaaat caccacgttt tgctaaaata acaggcagtc tgcctcaagc attttgagtt
      901 tatacagtaa ccagaaaaaa agaaggggct tttttgttgg ttgcttcatt tttaaaaaga
      961 aagttcaatc atcgctttcc ttaaatatct taatctggtc attattcact ttttacccac
     1021 tgtgtattag aaatacttgt aagcagcggc c
//
LOCUS       KCKM01000646            1051 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10246apa ultra-conserved element locus
            uce-8043, sequence.
ACCESSION   KCKM01000646
VERSION     KCKM01000646.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1051)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1051)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1051
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10246apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1051
                     /note="ultra-conserved element locus uce-8043"
BASE COUNT          354 a          190 c          227 g          280 t
ORIGIN      
        1 attcaaagct ctaatatata gccaagggta gtctatagag actactgttc tgtaggatac
       61 tctctcttcc acctgctgcg aaatgtgtct ttgaaagcgg aaaggtggtg aaaccaatag
      121 tggaaaagat ggggtgatat ttgctcaaca cgcatcactc caagtgcgtg gaactcgcca
      181 ctaacagctc gccccgtgtt acacacgtgg tacagttcca gacacgttag gttactctca
      241 ctgagccgtg ggaggcacaa ttcatattcc atgtgcccga ctatgaaaac ttcctttggt
      301 acttagtcaa atgaaggggc tattgccatc acttgcttcc acacttccag ctctaacaat
      361 aagcgatggt acaaaacact ttaaagaaat aacaagcacg tcctcagatt attgtgccaa
      421 agaaagagat aaaacaggaa caaagtaaca aattatattg tcagaaaaaa tgtgaacttt
      481 ttgattgggg atgacattta ttttaagtgt gcaatgacgg cagggaatct gtcagggtaa
      541 gacatggcag aggtttcaac gtttgttaag agtgtcatgg gaatttaact aaaactgtta
      601 aaactgacac tattggcttt tgttaacaca ttaagcatgg gaaaagtgcc agtcagcata
      661 tcctccatag catcagttca gttaaatcat ctggaagatg cataaaactg ggtgtgataa
      721 taaatgcgac gttttccaca catggataga ggagtggaga gggacaggac cattctgaca
      781 agaacaatga gatcactttt aaaaacgtgc acctgctttg taatttaaaa gcatgagaga
      841 gggagggagg agttttagaa aaaaaattaa gacgagtaaa gcaaacttac tgaatgcaat
      901 acaaatgtat tctgtgtaag tgcttatagt agaaaataac tcaatactga agtgtatatt
      961 tatggaattg gctcgagtac aattaaagca ctgtctaaag cattccactt taaaacagac
     1021 tcaattacca cttcatagtt tggctggcag a
//
LOCUS       KCKM01000647             966 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10262apa ultra-conserved element locus
            uce-574, sequence.
ACCESSION   KCKM01000647
VERSION     KCKM01000647.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 966)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 966)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..966
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10262apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>966
                     /note="ultra-conserved element locus uce-574"
BASE COUNT          246 a          175 c          231 g          314 t
ORIGIN      
        1 gaaatcgccc aagacttcaa aacagacttg aggttccaga gtgcggccat cggcgcgctg
       61 caggtattgc tggcagcctg ctgcgggcct tggcgcttcg cggcctcgga gggtgcttcg
      121 ctgagggtat ctaacgagat ttcttcttgt gctcttgaaa caggaggcca gtgaagcgta
      181 tctggtgggt ctgtttgaag atacaaatct gtgcgccatc catgccaaga gagtcaccat
      241 catgcccaaa gacatccagt tggctcgcag gatacgggga gagcgggctt aagtgaaggc
      301 tgtttttatg gtgttttgta gtaaattctg taaaatactt tggttttaat ttgtgacttt
      361 ttttgtaaga aattgtttat aatatgttgc atttgtactt aagtcattcc atctttcact
      421 caggatgaat gctaaaagtg actgttcaca taaacctcag tgatgtgagc cttgttgctc
      481 aggagtgaca agttgctaat atgcagaagg gatgggtgat ctttcttgct tctcatgcat
      541 gtttctgtat gttaatgact tgttgggtag ctaaacttgt aaggtactag aattgatata
      601 aatgtgtaca gggtcctttt gcaataaaac tggttatgac ttgatccaag tgtttaacaa
      661 ttggggctgt tagtctgacc atacatcact gtgatcaaat gtggactttt tcagagggtg
      721 aaactacaag tcttaaccac agtgtaactt acagtttcct aaaaacgtaa acctggcagc
      781 tatagaatac actatgtgca tttataatag ctattttata tattgtagtg tcaacatttt
      841 taaattaaat gttttacatt cacatgtgag gagtcgttgt catttggttt gtatgggcta
      901 gaagaagctt cctcctcctc ctggctctgg tctgtcagca gtagatgtct gtaatcatgg
      961 actgct
//
LOCUS       KCKM01000648             256 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10277apa ultra-conserved element locus
            uce-2365, sequence.
ACCESSION   KCKM01000648
VERSION     KCKM01000648.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 256)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 256)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10277apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>256
                     /note="ultra-conserved element locus uce-2365"
BASE COUNT           84 a           38 c           46 g           88 t
ORIGIN      
        1 ttttcctacc tttttggata cttataaatg agatattata tttccataca ttttattccc
       61 agccacatct gtgaatctaa tattgacctg gagttatctg tgatagagaa gttattaatt
      121 ttgacagata taagggagaa gctaatatcc tccttttaca aacacctaat attaatctct
      181 agtgatgtaa acgagaactc cagaatggct tggggtggtg ctggaaatga tatgagatcg
      241 aaatttgata atgaaa
//
LOCUS       KCKM01000649            1019 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10291apa ultra-conserved element locus
            uce-6746, sequence.
ACCESSION   KCKM01000649
VERSION     KCKM01000649.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1019)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1019)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1019
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10291apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1019
                     /note="ultra-conserved element locus uce-6746"
BASE COUNT          292 a          210 c          228 g          289 t
ORIGIN      
        1 aagaaaagaa aaacctacaa aaaacgaaac aaccaaccca caaacaaaac catggatgaa
       61 tctgctgagc tagtttgctg atgttagaaa cagttgttca tattaggaac acctaattta
      121 atttcatgaa agagacataa catgccagta tgtgtatgaa tctaaggtat gcatttccta
      181 aaaggaacta aaactctgtc attccaaagt tgctcttctt tttgacttcc agcttgcatg
      241 gggactgctg tctggaagca gtaactttaa ctttaactct aaggctgctg atgaggtctg
      301 tctgtgtgat cttcgtaagc agataagggt agggagacag ctcagagcag agcttgttta
      361 cagcaggaca gaagaaaaca gctagacata aatgagggct gacggtttca tgaagcacaa
      421 ttggttgatc acagattcaa tatgactgcc ctgaactgag cgatgatccg tacagtatgc
      481 aaaattcact ttcttgctgg tctgtgccca ccagccttcc agcagctttc ccagagcccc
      541 tcagccacgg ctttgagtgg aaccagagct gaacgcagca ttgttgtacc caattccttt
      601 tgacaacaat cacattcttt taaaaacttc ataggtttta gttgtcactg gttataaatg
      661 agggtttttt ccctcgctgt gctgccgctg ctgttgcggc gctcgctgct ctcctgcaga
      721 ccccagtgcg ctgggttctg gtactccagt ttttcctttg tttcagttgg tataggaaag
      781 caggcggtgc gttttaatga cgacggcatg caaaaaggca tttaaaggtt taggtcgctt
      841 ttggaatgac atagtgactg gtctgcactg tgctcagaca cttctaactc cccttgcctt
      901 tgttgtaatg aagcatattc aaggtaaaaa ggcatttaaa aaaaaaaagt tgaaaagcaa
      961 gatttttttc accagctgtg gtggagcttt gagataggat gaattgttat cagcagcag
//
LOCUS       KCKM01000650             914 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10306apa ultra-conserved element locus
            uce-2208, sequence.
ACCESSION   KCKM01000650
VERSION     KCKM01000650.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 914)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 914)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..914
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10306apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>914
                     /note="ultra-conserved element locus uce-2208"
BASE COUNT          253 a          161 c          212 g          288 t
ORIGIN      
        1 agctgtagtt caagttgcaa agcccctgga ttgtcaagta gctatcttcg ttccctcatg
       61 gtaacaggtt tttaattttt ggtttgtttt ccaagtgaag cactttgttt tgaccttcaa
      121 cagatgtgct tggtagagcc tgaagtcccc gatcactttt ttttctgtgg gggcacattt
      181 agacctgctc agctttgtgc atctcctgtg actgcaaatc aaacaggttc caaatactct
      241 ccataaaatg gtcttctgta taaatgctca gctgacttaa tctagaggaa aataatcagg
      301 ctcagttcat ttcagagtga agatgcagtg ggagatagtg tagtacttaa agtatgtcag
      361 gtaggtcttg cttccctaca cagcaattat aaacatgatt gtttgtcttc acaggtggaa
      421 acattttctg gtgtctacaa gaagctcaca ggcaaagatg tggtgtttga atttccagaa
      481 ttccagctgt aaagtgcaaa aaatggctga ataaacaact gttcatatac agagtaattt
      541 catttaaatt ttgaattccg taaacgtatg tggggattaa ctggttcatg agagttctct
      601 cctgtctgga tgagtagcac ttgtgtattg aagtattaag tcaccagtgt tttaacgata
      661 gccatcctag gttgttcttg gcgctgttgc aacacgactc cagaaaaata aactgaagta
      721 tgttgaggct tatcttttgg ggagaatgga gaattgctgt agagcagtgg agctcctgag
      781 ctttgcatgc aggaatacga gttggacacc tgcgtgttcc tgacactgga agaagtcacg
      841 tagcagatgg tggtgacctc tgaaatagaa gcaatggcat ctgaaaaaag ggtttgaatt
      901 tttggtaaat atct
//
LOCUS       KCKM01000651             411 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10321apa ultra-conserved element locus
            uce-7665, sequence.
ACCESSION   KCKM01000651
VERSION     KCKM01000651.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 411)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 411)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10321apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>411
                     /note="ultra-conserved element locus uce-7665"
BASE COUNT          144 a           59 c           86 g          122 t
ORIGIN      
        1 aaggctccta gaggaaaaga gagagaaaga gaatgaaaat gattttaatt tttttttggc
       61 gtagaaatga agctgatatt gaaagtgagt aaattttaat gaaacggtgc aaaaatgaca
      121 tcatttactc agaaatcatt aatttgtcag cattaatatt tcagctacaa cattgcctgt
      181 cattctgtgc cagcaatgac tgataaatct ataaaagtgt gctgctaatt tactgaatat
      241 ttatgtgcag tgtcatttgc agagtaggat ttgaatttat ttcgctcggt attcagctgg
      301 agaacatttc tagcaaaccg aaaatgaaca gcaccaggct gtgcaaagta aagctggcaa
      361 aacttcttaa ataacatttt aaaaggagaa ggctgcggtg ttgccatcgg a
//
LOCUS       KCKM01000652             710 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10337apa ultra-conserved element locus
            uce-6311, sequence.
ACCESSION   KCKM01000652
VERSION     KCKM01000652.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 710)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 710)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..710
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10337apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>710
                     /note="ultra-conserved element locus uce-6311"
BASE COUNT          209 a          114 c          138 g          249 t
ORIGIN      
        1 agtttgatgt ttcatttgaa ggtaaaataa taaaatgttt tctttgtatt gattgaagaa
       61 atatagtgct tattttttgc ttcattttct agtagttatt caataggtta aagggcaata
      121 ccatctgttt cctaacagga cattttgtgt aagatttgca agtcctacag gtacctttaa
      181 gcatggataa atatgcactc atggtttcag ctggatagtt tttcaccacc aaaggatgat
      241 tatgttgtgt gccttgagac acaggctata atatatttcc tgtcccttta ttgcattttg
      301 gaatcataaa caatgactgt ttggctcaaa gccatttatt cagcccaaaa agacattatt
      361 tgcacaacaa aaatcaataa aaatgttact aggtctggct ggatactttg cttaactgtg
      421 atatttgtct gtcactgatg gcatgccatc tctcgtagga gactggggcc aaaacagagc
      481 tattgatcca gtcatcagtg atggatactg gcatttggaa tgggctactg cagagaatct
      541 cgattaaaaa aaatatttct atgttttgcc tgcagcagag tcaagataac ctgaatgagg
      601 agattttctc ttttatattg ggtttcttct cttgtggttg ttaaatgctc tggaccaaag
      661 ttcattattg aaagaattaa gtcaatctat gtttagccaa aggctttgac
//
LOCUS       KCKM01000653             466 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10352apa ultra-conserved element locus
            uce-6797, sequence.
ACCESSION   KCKM01000653
VERSION     KCKM01000653.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 466)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 466)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10352apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>466
                     /note="ultra-conserved element locus uce-6797"
BASE COUNT          139 a           88 c          105 g          134 t
ORIGIN      
        1 atgtaataga gcagaagggt tttagctgag taaacaacca gctcttcaac atggctttgt
       61 tgtatttacc agtgtcaggg cggttttcaa aagacttcaa aacagtagga tgagcgttgg
      121 gtcaaagtag cagattcctg acagattttt ttaaatttct ctctcccctt tccagaggag
      181 gagctgcaga gggagccagt gacaaagagc caaggtctgt gaggtttccc gagagcatgt
      241 aacaaatgta ggaaaccgtg aaggagagga ctataaatca agacccaaaa ggatgcactg
      301 tccatggcag ccactttaaa ccttcaacga gacatttttt gagcaagttt ttggaatttt
      361 ggtgggctct gacctgcagt tttcacttcc aaaataactt gacttttcta aagtggtaat
      421 ttcattttca tgataatgct aaactcaagc cacatgtgct ttaatt
//
LOCUS       KCKM01000654            1188 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10367apa ultra-conserved element locus
            uce-949, sequence.
ACCESSION   KCKM01000654
VERSION     KCKM01000654.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1188)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1188)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1188
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10367apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1188
                     /note="ultra-conserved element locus uce-949"
BASE COUNT          351 a          202 c          247 g          388 t
ORIGIN      
        1 tttcaggtca gagtggaaat ataaattagc tactgttttc cttcctgtcc tgataatatt
       61 gttttgttta tatcaccatg gaaagcttta tgcaaatttt ctcactatac catatccatt
      121 atagcttaaa gagaaaacag tctaataaaa attctctaac cagctattac gtgtagcaaa
      181 ggaaactgaa aggtgtgcag tctttcaaag tgtcattgct gccaactcaa gcttcagaga
      241 ggtagaaatc agaactattc cttcatagag acaaattgct gtgagctcca gatgaagaca
      301 gcaaagcatg gagagactat ggttcacaag ccaggtctca cctgatattt tggtcctgtg
      361 gctccgggac atttttgcca ctccttctga cagtttgttg ggttggtcct ctacacacct
      421 ttacagctgc aactcctgct gcacatgttg caggacatgt ggaaggtcat tagtgttttc
      481 agtctgtgtt actgtcatcc taaaatgcaa tcttaccatg cactttgcac tatgagggct
      541 aggaaaccag tatctttcgt agtaatgact tccagtttac agccttcatt tgttatattt
      601 cctcaatagc tgttgtgttg agattaactg cataaatggt ctgcagctgg ctgttatgaa
      661 ttaagggagt ttaatcaaag tatttctaat gtacagcata atgataatac atgggggaag
      721 tactatttaa gagataatga tggcttcaga agatcactgt tgtaatgttt agtgcatatg
      781 ccttcagcat tgaatttgtt gttgttctga atatgcttaa tggatcagtg aaaagctgcc
      841 taatgtggga ttgtttgatg gggctgacag agctggaatt agcccattgc tgtttactgc
      901 atacagccat taagattaat tgctgccaga taattttgac tgtttttatc ttcgggaaaa
      961 agtgtcacta atgggtttat aaattggttc actattacta atagtaaggc cagtgtaaca
     1021 ggagaggatg tcagcagcta attctaaaga taaaggtaaa aagtataaag tactatatga
     1081 cttgctagtt ttaagggata atgttatcta ataacagaca gactgatata tgatgctcat
     1141 taatgctatt tcccgggctt tgggttgaac ctaatagatg ctaataaa
//
LOCUS       KCKM01000655             274 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10383apa ultra-conserved element locus
            uce-5481, sequence.
ACCESSION   KCKM01000655
VERSION     KCKM01000655.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 274)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 274)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10383apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>274
                     /note="ultra-conserved element locus uce-5481"
BASE COUNT          102 a           36 c           43 g           93 t
ORIGIN      
        1 taaagggtaa ttcacatata atgcttttat ttaatagccc aatttacaaa acgtctaaaa
       61 ttaatgcaga tcttttcagg acaaaatcag ctgtaactgc accaactaat ttttgctcat
      121 ttgaactgaa ttattaataa gagagaaata taccatatgt tcccaaaaga gctggataca
      181 tttatttcaa ataaaattgc tgtgtttggt ggaatataag aggtttaaat gctttcagag
      241 aaatgggtta cttatatact gatttaatag agta
//
LOCUS       KCKM01000656             857 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10399apa ultra-conserved element locus
            uce-6805, sequence.
ACCESSION   KCKM01000656
VERSION     KCKM01000656.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 857)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 857)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..857
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10399apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>857
                     /note="ultra-conserved element locus uce-6805"
BASE COUNT          274 a          156 c          186 g          241 t
ORIGIN      
        1 tttgcttctg tagccacaaa acccattcct ttttctcctt ctggtgttat tcctttatgt
       61 ggtacataac tggtgtttcc tcaggggttt gtttgttttt cctttttttt aatgtttcat
      121 ctttaatcat caggagctct tgtcctttgg atcaagtcct ataccactgg actcaatgcc
      181 tgttttgtca ccaaggagga aaacttcatg ggagtcagac tgagacccaa atcaaataga
      241 taccaaaggt caataaagca aagctagtga gaaaggaagg gcaagggtta aaacaaatac
      301 aactcgtgtg agttttgtta tatggtgaat gaatcatatg gattatggat caaggactac
      361 ataattaaac atgtaaggta tcgaggtaaa gtaccagaat acataaagag gataatttct
      421 ttagtcagca aatgggcaat aacaggaaaa aatttttgtc ttgggatagc gagcagttgt
      481 ataaacatat gatgcaaagg ctttttcaaa tagacataac attgccatat gttccatcaa
      541 aaaactgcag agggacttgg gaaaatcaga atgatttaag aggggctata cacatctctg
      601 ccaccacttg gttagctgaa cacaggcagc caaaggtaag aagtactgtt aaacaaggac
      661 atgttaagag accagagtgt gccccagaga ttcttgcact gagataatga aagctctcaa
      721 atgtcaccac agaactacag ctctccttaa aacgtggcag agagacagtg ctctctgtag
      781 gtgctgggag ctgacattgc atatgggata gctcttcccg atggacacaa aaagcccatt
      841 aaagtggctg gatatgt
//
LOCUS       KCKM01000657            1012 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10415apa ultra-conserved element locus
            uce-513, sequence.
ACCESSION   KCKM01000657
VERSION     KCKM01000657.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1012)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1012)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10415apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1012
                     /note="ultra-conserved element locus uce-513"
BASE COUNT          273 a          244 c          200 g          295 t
ORIGIN      
        1 ttactaaata ggtaatttac cgcgagaaat cgtgtccggg gattaatggc aaaactgcat
       61 ccacttttct tctgcttagt gaggaccgta tttgtaattg ctgtatgcaa agtacccaca
      121 acatgccggc tcagctaaga tgggacgaag aggttttaac aaataccgac attgtttata
      181 tgaagcaatg gtcagtacat gaaataacgg ccagtttatc cctgtactga acgcgtctga
      241 aacacgacga caaaaagcct ttggcgcctg ggacaatttt tcagcatctt ataggaagga
      301 agctctagtc tttaccgccg gctgcgcact gtaacctgcc gctattggcg agaagcagat
      361 tttacactga ccatgttctc cggctgcttt tagtgtcgct tcaggatgtg tcgatccgag
      421 ggggttacgc acaaatcgtc gccggcgccg caagtcatct tcccagtagt caaggcgcca
      481 gaactcacga ggacgactac aatgaaacag aggagccaca tatgttagca attatcaaac
      541 agcatggtag cgctgaattt ctgcataaag ctctccttgt ttgcgctgct tccccccctc
      601 cctttttttt cctaacctcc tccctttctg caatctttta cttaggtatg tccttgaaaa
      661 taacaatatc accttccagt ctaaggaact cctttccctt ttttcttgga aggtgaaatg
      721 agcactaaat acatcatttt gaaatgaatt gctgacagtg tgatcagttt ccccacactc
      781 tagtggcatg tgctccgatt tcagcctcat ttcagcctca gcagggcacc tttctcagca
      841 accgcattta taaaccagaa tagggaaaag gctattataa atatggtata gcattaccta
      901 tattaatcaa agtctgtccc ccttcatttt tcttcctaat ttgtgccttt ttgcacaagg
      961 tcagtaaatc ataccacgaa ttcttggtcc agaaagtgtt aactttaatg aa
//
LOCUS       KCKM01000658             848 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10429apa ultra-conserved element locus
            uce-6524, sequence.
ACCESSION   KCKM01000658
VERSION     KCKM01000658.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 848)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 848)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..848
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10429apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>848
                     /note="ultra-conserved element locus uce-6524"
BASE COUNT          193 a          215 c          240 g          200 t
ORIGIN      
        1 aggggcctgg gccaggcttc tcccacatgc aggggatgat gggagatcag accccgagga
       61 tgggactaac gttgcccggc atggggggcc ccgggccggt gggaactccg gatctccctc
      121 tcgggacggc tccgtccatg ccagggcaca acccgatgag accgcctgcc ttcctgcagc
      181 aaggcatgat ggggccgcac caccgcatga tgtcaccagc acaaacggcg atgcctggcc
      241 agcccgcgct catgagtaac ccggtggccg ccgtgggcat gatcccgggc aaggaccgag
      301 cccccgcagg gctgtacagc cacccgggcc ccgtggggtc gcctggaatg atgatgtcaa
      361 tgcagggcat gatgggaccc caacaaaaca tcatgattcc ccctcagatg aggccccgag
      421 gtatggctgc tgacgttggc atgggaggat ttagccaagg ccctggaaac ccagggaaca
      481 tgatgtttta agctgctacc ataagactgg atgttctgat ccttgtcaag atgagattcc
      541 aagtcctgag ggcttttttg ggagcttcag gagtacagtt tggccatgca ataggtgaaa
      601 agagaccaga ggacactttg ggaaatctcg aatgtatgga attacctgaa aaaaaaaaat
      661 tattcatttt aacaggttgt gtttttttta agatttattt tttaaaaatt atttttgtgg
      721 acttgggtat cccgtgatgg cacctgcttt gagaatctgt agctgtattt tgagaattgc
      781 catttgtcac aagttgcacc attctctgta tgtttacgtc cttcggactg gcttctccca
      841 ggactctc
//
LOCUS       KCKM01000659             927 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10445apa ultra-conserved element locus
            uce-2943, sequence.
ACCESSION   KCKM01000659
VERSION     KCKM01000659.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 927)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 927)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..927
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10445apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>927
                     /note="ultra-conserved element locus uce-2943"
BASE COUNT          333 a          172 c          135 g          287 t
ORIGIN      
        1 tcattgtcca aaaccaccac cacctcagac atttattatt atactcatct gtacctctca
       61 cagcaccatt ttctttgtgt taagcactaa gttccccaaa atatgacctt taattctgca
      121 aaaaacacct tcattcttaa aacctaacct cagcactccc ttaaatttgc aaaccccttg
      181 tatatgacag catagcatta tcattccagg tgcttaatta aggtactttc taaattcagc
      241 ttacactaaa gataacctaa ttgtgcatgg gagaaatgtt gttttttcaa atgcagtcac
      301 agattcaact ggaggcccac taaaacagat aatgtagctc aatgcaactt ttttagaggt
      361 ggtgtaggag tggaaataat taaaatgtta cctttgccaa gtaattccca atgtatcctc
      421 actggcactg gggtataaat gcctgccgtt ttgattcatg gtccagtcac aaattctcag
      481 ctgtcaattg aaacctagca gtcagatatg gattgagcag tactacagtt tttagtattt
      541 aaatgaatac atgcatacta gtattgtaca tggcaaaagc cttactttcc caagaagtaa
      601 tttaaaaaaa taaaacaaac aaacaaacaa aaatatctta ttctgagaaa caaatgccta
      661 tagctttgct taagataatg ctattttaat atgcttctct attaataaag cataaaagag
      721 taactagtgt ttagcacata acaattagcc attattagat tacaaactga gctggaataa
      781 aaggaaatgt taatattcaa tagcaagata ctttaaggaa ggaaataaaa atgctgtttt
      841 ctctaagcaa tgctctatat aatgtgtatt aaaggtcaaa tataatcaat atcttgtagc
      901 atgcatttca tgaaacatag aagacat
//
LOCUS       KCKM01000660             253 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10460apa ultra-conserved element locus
            uce-3327, sequence.
ACCESSION   KCKM01000660
VERSION     KCKM01000660.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 253)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 253)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10460apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>253
                     /note="ultra-conserved element locus uce-3327"
BASE COUNT           75 a           54 c           55 g           69 t
ORIGIN      
        1 ggcgcgcaag cgaggccgcg gggagttggc ggccggacag gtcctgtcgt gcggcaagaa
       61 caatataaac tgactccaac tgaacaaaca aggatcgatc agataatttc agatattata
      121 attggcttta attaaacaca cttcgttcta attaactctg aaattttagc atgctttggg
      181 acgctggtgt ctgatttgat attgtcagtc cagatgtcct aataaaattc aatcctccac
      241 tcaagacttc aat
//
LOCUS       KCKM01000661             830 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10476apa ultra-conserved element locus
            uce-7160, sequence.
ACCESSION   KCKM01000661
VERSION     KCKM01000661.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 830)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 830)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..830
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10476apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>830
                     /note="ultra-conserved element locus uce-7160"
BASE COUNT          299 a          139 c          146 g          246 t
ORIGIN      
        1 gagaggagat accttagagt ggtagctgta taaaacagaa gaaaaaagtc tcattaaaat
       61 taatgcatag tagactatag agtaaattga aagacaacag gatctcaatg cattgcagtt
      121 ggaattcctg atttaacagt ttctgctacc ataagtgaaa aaatatctac agtgagaaat
      181 ttgccctttg attttactac tattcttcat gtacagtttg ctatagtttt aaaataggca
      241 aagaaagaaa gatttatttg acctacctgt aagccttgaa atatgtattt agcacagctg
      301 ttcttttgtg tttaaactca tcacaaaaat gcagctttaa tgtaacccac cattgatctg
      361 cagtaagtgg aaacaaaatc tctccttaat tagtatcatc caatcacttt tttacatttc
      421 tacagaacac acactgtgaa ctgtttaatg gactattatt tagaagagtg gcaaagagct
      481 tgcaaaaaaa aaaaaggcac atagtgaaaa taaaaactag cagtgtcaat gaaaaatgtg
      541 ttgcaaaata atggaaaaaa agatgtttcg ttaagatggg cttcactggt attttactgt
      601 atagatgaac actgctccaa ttactgccaa caatggggaa agagatagag agatatagat
      661 tcattacttt caacaccctt aactgtctac cactgaattc gcttatctgt tcctttttct
      721 acaggacctg catggagggg ggaaggaata aacaaagaac tgagtagagt gaatgtgtca
      781 caaattacca caaacacact gtgactcaat gcacttttca tttctctcct
//
LOCUS       KCKM01000662             777 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10492apa ultra-conserved element locus
            uce-1639, sequence.
ACCESSION   KCKM01000662
VERSION     KCKM01000662.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 777)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 777)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..777
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10492apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>777
                     /note="ultra-conserved element locus uce-1639"
BASE COUNT          246 a          164 c          123 g          244 t
ORIGIN      
        1 tataaagacc ctttcatcct ttcatttctc tccctctcaa tctttttact ttggaacccc
       61 gagatactgt agtttggaaa ctaggaagcc aaatgagtat agtcatgagg aaagacttca
      121 gttatacaat ccattaaata aaacaataga gcttgcagct gagctattaa aaagcgtaga
      181 gcaattttta tttcaatggc tacattttat ttcctcttct gagtgactgc taacaaaggg
      241 ctgctgaaag gactggataa aaagtagacg tcagatgcaa gatccatgag ttaaacaaca
      301 ttattagata caatttcata aaatctagtt gcttttctcc tactagaaat catgtccttt
      361 tgtcaacttg tggtcacatc agcacttctg ttgatataat ttgctccagc tgcagagcgt
      421 agctggcctg caaatcaaga actagaatag ggacagtcag gaataactca atggcttgga
      481 taatgtgcaa atcactatgc atcttgctat tagtatagtt tattttctct cagaatattt
      541 ggaacatgaa aaatttatct ttagcaaaac agccgatctg acactttact gagagcagaa
      601 ctggctggct agcttattgt aacaaccctc cttccctcac agctcacaca cacatacacc
      661 ccccactcta taatcattta agtgggatta tcatatcaaa acccttcatt atctttcatt
      721 gaattcagac caaacaccta atttcatata ttgtttgagg tctccctata atattgc
//
LOCUS       KCKM01000663             988 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10521apa ultra-conserved element locus
            uce-7532, sequence.
ACCESSION   KCKM01000663
VERSION     KCKM01000663.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 988)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 988)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..988
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10521apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>988
                     /note="ultra-conserved element locus uce-7532"
BASE COUNT          304 a          198 c          160 g          326 t
ORIGIN      
        1 tttgtcctgc tgttgagcca cattagtcct gatgaccata aaaagcctca tcttgccatt
       61 gatacaacgc ctgctcgttg actcgggaga tggtatttct aaagatgctc tgtacaggct
      121 ggaaaagaga agcctcactt ctctggcaaa cttgtcccaa acgtaatagc ttgatataaa
      181 agtaagcacc aggcacaagt ccgtgaaaaa caatattttg ctgccactaa caagggctaa
      241 tttctttgtc taagtgtaca atatagcaaa agtaagcttt atttcccagg agatgaaata
      301 cttcatttat tcatgtaact tgctcagact ttatattctt gtgtgtttca ggaattcagt
      361 agttgccttc ttgtaatatt tcagatttta agctgttttc ttgcctcact gaactcacat
      421 aagatacatc tgaaagcttt agtacaaatt tacttcgaat aaagtcttca attcattttc
      481 atggcaccaa aaagacagct ttaataactg caatgacaaa taaactggaa atcattccag
      541 gccttttcac ttaactgaca agtagaacgc tctcataatg agccgcaggt tttacgtttt
      601 ctctttgacc ataatagctt catttaagag cgtcagaccc tgacacttca tcatttatct
      661 acattatttc tcatcttctt tcaaataaat tatggaatac tagactgagc acataaaaac
      721 aaagtgactt gttatctgta aacagcaaga taaattgtcc agaagttcct catttagttc
      781 cttttaaatt taagggcaaa ttattggttg tacctttttt tttttccccc tctcccaatt
      841 ttttgcattt ttttacagcc atcttattct gttgccagtg gcctttgtgc agccatccaa
      901 agcctgatga tgttgtggaa ggcataaaat aattctatta tcccaaggtt ggacagggta
      961 gcacagaaaa gaaaaaaata ttgaaaaa
//
LOCUS       KCKM01000664             752 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10536apa ultra-conserved element locus
            uce-6516, sequence.
ACCESSION   KCKM01000664
VERSION     KCKM01000664.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 752)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 752)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..752
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10536apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>752
                     /note="ultra-conserved element locus uce-6516"
BASE COUNT          219 a          131 c          171 g          231 t
ORIGIN      
        1 gttataaagc agaacttgaa gaaatgcttt atctcagtgc ttttgaggtg tgaattatcc
       61 taacaaagga ggttgccatg gcaataagat cttcgatgct gtattgtgtg ttaatgtact
      121 aaggtgacat ttgattcaga attcggtatt tgagtgtact tactgtgatg aagtgtaaaa
      181 gaaatggcat gataaggaac ttggattgat ttaggaagaa gaatttggag ttggagagat
      241 ttgttctgat catggactgc agcagtctca cacgcagcta gaggtgctgg agaatgaatt
      301 gactgggaga cagcaagaca ttgaagagct aaacagagag ctagaagaaa tgagggcagc
      361 atatggtaca gaaggattgc aacaggtata attaccttac gttgccttct acttgctact
      421 cggttacttg cgaaaatgca gagcatcacc tgagagactt cacacttagt agcagctgat
      481 cagaatgcag tgagtgtgtc gcagaattac acagaatttc ttccagtcac gtgtcgtgtg
      541 ctctctttct ttgaatggca ttctcattgt gtgtcctttt tctctctgtt ttgtgactaa
      601 aatcccagtc ttcacagtga ctttcctcaa gtcaggaatg cgaggactat tttcttcaag
      661 aaaacccgta attctctaat tttgcaaaga ctgcatttct ttgatacctt tttccaagat
      721 caaaaaaccc tccagtttta cttctgaagg aa
//
LOCUS       KCKM01000665             701 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10552apa ultra-conserved element locus
            uce-3434, sequence.
ACCESSION   KCKM01000665
VERSION     KCKM01000665.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 701)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 701)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..701
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10552apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>701
                     /note="ultra-conserved element locus uce-3434"
BASE COUNT          227 a          130 c          112 g          232 t
ORIGIN      
        1 cagggcttcc tggatattct tcttttacct cccttgtgtc tcacttattt ctactgctta
       61 gcaaaggtgc tgactctatc tctctaagct ttagtttaaa tgtccaacac cgcttattaa
      121 tgaaagtaat aggcttttgt ttattacatg taataatggt gaatatgact atttaatata
      181 aatctgacat ttaaattcca cttagttccg agattcggtt gatataaacg aataactctt
      241 taccctagag taaaaactcc ctcagtctgc attttaaagc attgaagttt tcaaagtaat
      301 cagttttttt cagaggaacc aaattgtgaa gacatctgtt atgttattaa tttcacataa
      361 atcttaagct cctcaaggcc tgaaatgagg cttcattcaa gccgaattaa tgaaacatga
      421 ttgtaagtcc cttgcatgga aatgctgtca tacagtattg agttgcttat aatcactgag
      481 taatcttgcg ggctgccaag ggagagctac tttaaatccc tccataaaac aatatctgaa
      541 aatatcagaa cactaactat atcctggaag attaatagca gatgaaaatt tctatgaaat
      601 gaatcattct ttctcagtaa aggatacaag catttccagt aactgcagat tgtataatac
      661 aaagcacaat ctacgatcca gatgcgagtt gcatttaagc t
//
LOCUS       KCKM01000666             389 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10568apa ultra-conserved element locus
            uce-441, sequence.
ACCESSION   KCKM01000666
VERSION     KCKM01000666.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 389)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 389)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10568apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>389
                     /note="ultra-conserved element locus uce-441"
BASE COUNT          145 a           69 c           62 g          113 t
ORIGIN      
        1 ttacgtaatg tatccatgca aacaaaggtg tataaataca tttctgaaat acaaaatatt
       61 aatactaata tgaactatac catgatctag aggatatcca ggaggcctgt catacttcta
      121 ttacttcagg taaataactg attgaccttt gtggtgtgct gatacttcac taatcagaac
      181 ctgaaatctg tataacaaca cttcatttac ttgatagaca aaagaacaat tgcacttgaa
      241 gtaatgtgat ttctaaatag acactgcctg tcaaaaataa atgcattaga agtaaaatgt
      301 agctcaagga gacaattagc aaacagaggt gacactgtaa acaggtgcac ccattattcc
      361 caaagcttgt ggcaatatat tcacatctt
//
LOCUS       KCKM01000667             651 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10584apa ultra-conserved element locus
            uce-5756, sequence.
ACCESSION   KCKM01000667
VERSION     KCKM01000667.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 651)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 651)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10584apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>651
                     /note="ultra-conserved element locus uce-5756"
BASE COUNT          233 a          117 c          105 g          196 t
ORIGIN      
        1 taggtcagga atacccaaag gatacacatt tgaaggctac agatagcaga acacaccatt
       61 tacggctttg tatatataca tacatacaca ttctatataa tataggtaga tagattcaat
      121 gatttaaaca catgacatct atactgtgtg tttcaagaac attcagatat ttacactgtt
      181 agatcaccac tcatttttag acctacacta gtgccagctg ccaaaaaaga agtacacaaa
      241 tcaaaatatg ttacctttgt tcaaacaata ctgctgttca ttatataata gaaactgtca
      301 cgcttaatct tccaggaacc aagaactggt acattcttgg atcagaggtg gctttgaaat
      361 ggtttgaggc aaaactgaag catattgttt aagtaaatct agttgagaaa cacaagcgca
      421 tttaggattt ttaacatcat cttttacata cctttttcag atgtattagt aaacaaaaaa
      481 atctggcata ttttcaaaat gcagagacat gaacgcataa gtgttttttc tgtaacattt
      541 ttacaatatc gaattataca ctccctcctg cattgtcaac ctcactaaat gtaatggggg
      601 atctgaaaag gatgctaggg aacagatgcc acagtgaaat aaaatgtacc t
//
LOCUS       KCKM01000668             835 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10599apa ultra-conserved element locus
            uce-1600, sequence.
ACCESSION   KCKM01000668
VERSION     KCKM01000668.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 835)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 835)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..835
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10599apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>835
                     /note="ultra-conserved element locus uce-1600"
BASE COUNT          273 a          176 c          125 g          261 t
ORIGIN      
        1 tttattgcac aaagcatgta ttaattatta aaaaaaggca gaactttacc ttcttggttg
       61 ttacaattct ctcacctctt gtctttataa ccatgctgcc agactgtcaa gaaaagctcc
      121 caaataaatt tagcattgta attattacaa ataagtcaca ctggcatttg tgtaggaaga
      181 cacccccctc cctgcatgct tctaccacgg tggcaaactt atttcaaaaa ttctgatgaa
      241 acgctttgta aattttgtta ttctgtgatg ataataaatc attatagcct taaacacttc
      301 tctagcttgg agcctcagtc acaaattatc ttgtcattct gaccaaaaca ttctccaaaa
      361 aagcttgaca agtgctaaaa cccagaacat gaaaccatgt gttgttgtga aagcaagatt
      421 cagaaatgtc aattaattag attaagaggc tacttttagc tttacttgtg ttgccaaata
      481 acccttaaaa tatgcatagc agtggaagtc tacctcagca atacagtact tctgcgcaaa
      541 ataaagacaa tggatctggc taatagaggg aattattgta tctgtcattc agacaaggag
      601 aatgatctag aagcaaatgt cttgcttccc tttccactgt atggattcac aagcaagata
      661 aattctgcca cttacgagtt caggcacacc cctgaaatct gattcagatt cagaaataaa
      721 agtcaaatca ctattataca tctccatcag taaaatggat ttctaacatc actctctatg
      781 ttgctgccct cccccaaact atcatccttt atttgcattt ttgaagttca cttta
//
LOCUS       KCKM01000669             724 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10614apa ultra-conserved element locus
            uce-449, sequence.
ACCESSION   KCKM01000669
VERSION     KCKM01000669.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 724)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 724)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..724
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10614apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>724
                     /note="ultra-conserved element locus uce-449"
BASE COUNT          190 a          129 c          148 g          257 t
ORIGIN      
        1 tttttcctcc tgtgggtttg ggggagaaaa ggtcctttat tctttagtaa cttttctgat
       61 tttaaatatg tgcttgtctg gtcataagga tcaaggtcat tcctactgct cagggcctag
      121 gctttgtgct ggcattggcg gaacttctct cctctctcct tttcctccct ccctctatct
      181 ctccttttct ttttctcctg aggtgcagat ggccacattt gcaggttaac tggaacagct
      241 ggaggcacat tattagcttc ctgctgctaa ctcatatttg cttagatttt ttttttttaa
      301 cagcaacata atttacaagt agtaggccag tgacaaagct ggcatgttct aaatccgcat
      361 ctgatttata taatgctgtt gcttatcagt gaatgaagtc ataattattg ctttgtacca
      421 ttaaatagca taaatatata aactgttata caaattgcag taaatgtttc ctctagggag
      481 ctctagacaa aattttaatg tagtgcattt gtctgtggtg gcagtttcta tggtatataa
      541 taatgttgat aaattttact gtagcgagtg acattttata acattaatcc tggtggtaaa
      601 aatctgatga atactacagc tgtactggtg gattcaagaa gaatgagagc ttttgacacc
      661 aagtgaattg attttaatag tgcttcaagg ctccaaggca cgaggatggt gcagagatgg
      721 caga
//
LOCUS       KCKM01000670             391 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10630apa ultra-conserved element locus
            uce-5867, sequence.
ACCESSION   KCKM01000670
VERSION     KCKM01000670.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 391)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 391)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10630apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>391
                     /note="ultra-conserved element locus uce-5867"
BASE COUNT           55 a          147 c          119 g           70 t
ORIGIN      
        1 ctcggctccg caccgacctg gtggagcgcg gtgagcccgt ccacattggc gtagttgatg
       61 tcggcgcccc gctccagcag ccgcagcacc tcctcggtgt ccccgctgga acaggcggcc
      121 aggaagacgg cgccgtcgtc gaacttcacc ttggtctttt tgcgcttgac cacgggcggc
      181 tccaggtcgg tctcggagcc gatccagcgc ttcagctgct cgttccgctt ctgcttggcg
      241 tccgccatct tcataccccg ctcccgcctg gcccccttag ctaacgccgc tccgaggata
      301 gacttatacc gccagtatcc cacagcgcac cgcggcctcg ctcactcacc cacccagatg
      361 gagggcgcgg ggcgggagcg agcggagggg c
//
LOCUS       KCKM01000671             519 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10646apa ultra-conserved element locus
            uce-7496, sequence.
ACCESSION   KCKM01000671
VERSION     KCKM01000671.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 519)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 519)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10646apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>519
                     /note="ultra-conserved element locus uce-7496"
BASE COUNT          158 a           79 c           97 g          185 t
ORIGIN      
        1 ggctgtgtgg attggcagga gaactataat gctataattg gaacagagtt aagttctata
       61 tttgttcaaa atacatcaca ggaaaggatc caaagtttat atcatctgtc agattattat
      121 atatgcacac gcgtgcacat gcgtatatca gtacagttaa tttctggtac tactctatta
      181 attcattgtt ttcttgtaca ttttaggtgg agaactcagg ggatccatgg gaaaatttcc
      241 aaaataatca acccctaaca tattgggaat gtgtttattt actgatggtt acgatgtcca
      301 ctgttggcta tggagatgtt tatgcaaaaa caacacttgg tcgccttttc atggtcttct
      361 tcatccttgg gggattggta aaaaatatta tttccagcta ccttaatact tgatcctgtc
      421 tatcttaatg ctgtaattaa aaataatact atctgatttt tgtaatagat aaatattttg
      481 gcagagcttg ttaaattagt tcagtttagt agaatcaga
//
LOCUS       KCKM01000672             878 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10662apa ultra-conserved element locus
            uce-7605, sequence.
ACCESSION   KCKM01000672
VERSION     KCKM01000672.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 878)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 878)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..878
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10662apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>878
                     /note="ultra-conserved element locus uce-7605"
BASE COUNT          308 a          164 c          144 g          262 t
ORIGIN      
        1 agctactgct gagcttccaa cctgttgtct gggtttggaa gcttttaact tcaaaggaga
       61 aagccgcctg cagtcttgtc caggcagctc aagtcccagg tcacttatct tctctgggtc
      121 acaccaacag catcttctca cctaccactg aaaggaagat ctgatttctt gagtatcaaa
      181 cacactgaaa gctgtcagtt cacatgacat attgcatgtt agataactca agtaaaactc
      241 aagtaaaact ccattttaac tttgctgtat ttatatagta tataaatttt acatgctata
      301 tatttacagt ggggcacgtg ctttttatct ttaaaaaaac aaagatcaaa ctttagacat
      361 ctctgaacaa cacagcttgt ataaaccaga cagattattc agatgaactg tatttaatac
      421 aggttcccca ctcatctcct gatgcaggac cagtgaataa taagtgcatc acagtttgat
      481 agcatttaat aataaaaata aaaatcacag tatgaatttg tccataacca gacacttcag
      541 agagacaaaa cagacaactg agacttaaga caagtgacag tatattaaga aaatgtaata
      601 aaaacatatg gaagagtata catcagagat acattcagaa ctgcatattc gttgtttcac
      661 aatgtcaaaa accagaagat tttcttcaga tcttgaatat actcaaatgt gaagtaaatt
      721 agtttctagt gtgagacgtc acagaaaaaa gatgaaggtc ttgcaaaact ctagttactt
      781 gcgagcttgc ttgtgaaatt ttaaataagt ctttaaatta aatatacaga ctgtcagttg
      841 caatttttat aattcctggt cactcttgca ccagatgt
//
LOCUS       KCKM01000673             690 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10676apa ultra-conserved element locus
            uce-1618, sequence.
ACCESSION   KCKM01000673
VERSION     KCKM01000673.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 690)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 690)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..690
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10676apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>690
                     /note="ultra-conserved element locus uce-1618"
BASE COUNT          204 a          131 c          151 g          204 t
ORIGIN      
        1 atgataattt aaagacaggt gacatcatat attttgcaat actctaacaa tccagtctcc
       61 tactgtaaat gcacttggag agcaattttg atctgaaaaa atgtttcatt cttgaaaaaa
      121 ttccttctat tcggtggaac atgcttgaat tttacagatc tccaccaaaa aaattttttg
      181 tgactagttg gtgaaagaag cctaaggaaa atgtgtacct aatcctttta gctgacttaa
      241 tttagaatta ttaaaagcct tgatacacag gatttaacac gatctttcta gcagggtgtg
      301 atgtaatcta tttttgttcc tcagctagca gatggcttac ctttaagtaa tttccaatgt
      361 taggagatca aaagccatcc ttacgccaca gaggcagtaa tcgcacctct ctgctggggg
      421 ttgcttggga ctgcggtggg gatatgcaaa ggctgctggc atttccaaac atagaaggcc
      481 gacatttctt cagactttga agttaataat ccttcagaag ttgaaaaact gagagatttt
      541 caaaaccctt ttaatgtcct atatgccacg tgctaaagta aatacctgta agtaattgcc
      601 gtagactggc gcgaggaagg ggcgtgaggc gtcgtgggat gtgccaggca cactgccctg
      661 ctatggcagt gctactctgg gaagcagagg
//
LOCUS       KCKM01000674             803 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10692apa ultra-conserved element locus
            uce-1878, sequence.
ACCESSION   KCKM01000674
VERSION     KCKM01000674.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 803)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 803)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..803
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10692apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>803
                     /note="ultra-conserved element locus uce-1878"
BASE COUNT          227 a          172 c          173 g          231 t
ORIGIN      
        1 taatagtttt tcatgcaaac tattgtttgc cttaattgtt gtttcaacag ctgttttcat
       61 taaattgtaa agctctttgt gtctaatcct ttgagctgcg ctattgataa caagaacgca
      121 ctggagctag ctttagagga agagagtctc tgccaagctg gaaagcagtc atgaagttac
      181 ttgagaaata aggccctaca gtgggactgg ttgtgtagct aatccattag tcttttcaaa
      241 aggaccttag actgcaccct tatggctaaa ttgacccaac aacctatcaa tgcctttatt
      301 tgctgagtgg ttgtctatga aaggtctccg tgctggatcc aagctgtaat caaagccttc
      361 atcagtacca gggccctgat gacacaaatg gccaaacttt cgatgaggct ggctggcttc
      421 cagccacacc attttgaaga tacaaagagg ctgtgttgtg ctgtggaatt cattttcttg
      481 tttacttcct acagaaacaa gagcataatc agcactcagt gcattggatc agaccgctga
      541 gttgttgaca gaagcttgga gagacttgcc agctttccac atgaaacact ggctttcttc
      601 tagtgcaccc cccactgtct gtggccctgc caattgtagc acatcagagc ggccattgag
      661 ataatgaccg tgaagtctca tgatacactt tgatgaagtg taacattttt taaaggattt
      721 ttgtctgtgc caaaatgata gagacagctg actaaaaatc accccatcaa aatcaaggct
      781 gatgaacagc aggcaaagac atg
//
LOCUS       KCKM01000675             771 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10707apa ultra-conserved element locus
            uce-2431, sequence.
ACCESSION   KCKM01000675
VERSION     KCKM01000675.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 771)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 771)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..771
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10707apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>771
                     /note="ultra-conserved element locus uce-2431"
BASE COUNT          264 a          139 c          152 g          216 t
ORIGIN      
        1 aactgctgaa ggttattcag caagtttatc cacacccagt ggattcctta aaaaaaatcc
       61 gggggaaaaa agtacaatgg aatgaatagg ccctgccctt tcacagaaca tctagctgac
      121 atgtagcttg ctaaaaaaat gtaaatgatt taaagaaagg ctaagcagaa atgtacatca
      181 agtgccatta ttttatcacc cactttaatc acaggctgct gttcagaatg gcttgggatg
      241 ctggttgtta cagaagagat ttctgtacca ttattagaac ctctgaacaa atgcagtgag
      301 caggggaaaa aaagaggggg ggcaagagag tgagagcgag aaagaaaatg tagcagtggt
      361 taaagcatag tttaataact ccaatctcag tcactttttt catatgtatt gtatgtgcaa
      421 gtccatagta cagcataatg tgtcataatt tggcctccaa ttctgacagc actgcttgac
      481 ttgggcatta aatcattgcc ccgaggaatt cacattctgg caattcctga tggtaggact
      541 gtcatctcct cccacacatg acctatcatt tttgacatga ttgaatcaaa attagtcagt
      601 acatttagat gtaaattaga gacatccaag aataataatg agcacaaaaa tatagctctg
      661 tgtaattgac acggcaacag cttagtacag tcttccacag agtcctcgaa attattaata
      721 tcatgataac agaagtactg tatcaaaaaa gtaaggaaac tttttttttt t
//
LOCUS       KCKM01000676             525 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10722apa ultra-conserved element locus
            uce-7782, sequence.
ACCESSION   KCKM01000676
VERSION     KCKM01000676.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 525)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 525)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10722apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>525
                     /note="ultra-conserved element locus uce-7782"
BASE COUNT          186 a           93 c           83 g          163 t
ORIGIN      
        1 aaaaagacaa gacacaagta tgctcacaca taatggtaaa ctgaatttat ttccttttgg
       61 aaaacaattc cagtaatctc caggttcaga tcgcagagta aacattaata acagtaacat
      121 acaggttagt tcaactgatt caagaatttg gccatgtgaa atcattaagg aaagtcttga
      181 acactcaaag cttcaaatgg taaccagaaa aaaaatttct ttgacaatct acataacaac
      241 tattgcatat atggtaatgc tatctgtcat atcgcaaggc ttacaaatat atatatgggc
      301 cttattcaat tgtgagttcc tgctctgtga gaatgagtct cttcatattt tttgcaagaa
      361 tcttcagcaa taaaaaatag tcttagattc atccgtttgt ataccaaaag agagatttct
      421 agactgaagt ttaaacgaaa ggaaggccaa acagagctgt aatggaacgt agctattacc
      481 ttctccctct tccttgaaaa tgacactttt tcttaagctt ttttt
//
LOCUS       KCKM01000677             950 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10737apa ultra-conserved element locus
            uce-1611, sequence.
ACCESSION   KCKM01000677
VERSION     KCKM01000677.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 950)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 950)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..950
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10737apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>950
                     /note="ultra-conserved element locus uce-1611"
BASE COUNT          314 a          186 c          155 g          295 t
ORIGIN      
        1 tgggaaagac ccttgggatc cttccacact aaacagggaa ctggagactg catttctctc
       61 tgtgaaaccc agctcgattt cagagcaaat gctgccacgg aaagcgctgc cggagcctgc
      121 gctgcacatc tccgggggca gcgtctttca taaaacaatt atattttttt ctagatggag
      181 tgaaagcctt gaaaaagttt acttgatgtc taaccaagca atgctgcatc ttcaaatttg
      241 aaggggagct cagaaagtta gttttttatt attctgcatt taagtattat tttttaattg
      301 cagcgtatta aacataaaat ctggtacaat ctttaaaaat aaataggacc taactataaa
      361 tgggccctgt tgtgttttta tctttgacaa gcaagtaatt gcttctcaaa tttatcagtt
      421 tgtttatgca aaaaccattt accaagccta gctcaaaagc atcaatttca tcattatcat
      481 cttattaatt tagccaagct ataacacagc tgattattcc tgagtaatat cctctgcagc
      541 acatcatgtg tggcaaaacc atctgtacag tacctattta ataaataaac cctcggctaa
      601 atgtctctgt ttattgagaa ctaatgttta tagaaaatat aatggaactc aataaataac
      661 tcagcttcat caacctgcat atgaatcagt acgaagaacg ctgacatcat cacctttcaa
      721 gtaccagaga aagcaaaatt acccaaaaga gctatagagt caatattaag gcattaaaac
      781 tgcaatgaag gcatattaat gcttaaaact tcattgttgg cagtagaatt gccaccacgg
      841 acatatttta taactctaag aatacttagg ctttatgact gtttctttgt tgagtgcctt
      901 gcacttaatg tagttttcca ctttaaataa aaaaacccct caagatctta
//
LOCUS       KCKM01000678            1170 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10752apa ultra-conserved element locus
            uce-7864, sequence.
ACCESSION   KCKM01000678
VERSION     KCKM01000678.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1170)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1170)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1170
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10752apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1170
                     /note="ultra-conserved element locus uce-7864"
BASE COUNT          384 a          209 c          251 g          326 t
ORIGIN      
        1 ctgagtgaaa gtgtgagcat ataatttcat tttttctttt ttctccagat ggtttcagca
       61 cactgagatg gtttcacatg ttctttggcc tcctaaaatg gcttcaatat aacctgacac
      121 agacaatttc agtccaacaa taaaggaaat caaaatccat aatgcagaat cattcagagc
      181 tgctgggatt ttaaaatccc atgctcttta aggaactttc aaaataaatg aaatgtttta
      241 ttaattctaa cagcttaatg tacagaacta atagatgtgt agtccatcca tcataaaaat
      301 ctttgtcttc tcccataatg cattaatttc tttatacaga cagattgcgt ggctatgttt
      361 gtatgacact tttttcccac tcagatcaat tctaagacct ctgaactaaa gaaaatcatc
      421 tttctaaata gaatactaat tttagctaag ctgcttttga agactatgct ctttttaaaa
      481 acgccaaagc tccatacaaa aggtagggag aagagggaga gtgtagctga tgaaatgcaa
      541 atgaggcttt tctcagacag ctggctgctt tgcgatgaca tgtgtgatga atggctctta
      601 aaacatgagc aggcatcaag ctccaattca gtgtcagact ggcaaaaaca gcagcattac
      661 tggatgcttc ctttaattaa tgcaacactt ctgcattagt ccggacactg ccgataaatg
      721 ggaaagaagt gatatcagtg gtaatatcag aaatctttca accttgaagc tgggatgcat
      781 tagccaaaag ctgcggtatc gtaaaaggtt taattgtatt tgtaatgtac cagtgcaccg
      841 tgacaaaaat gggagatagt gtaggcagga cagagcaagc cagtgataaa tgagtgtgag
      901 tgagtgatta taaagcaagg agaagtgtga aaacagacaa tagacagaga aggggaaggg
      961 ggcagggatg gggggttatg acagcaacag ctactctaat gtgaaaagta ggtaacaaga
     1021 ggaacctggc tatagttttg agcagggcca caagcacaaa tcagtctaac ataaatcttt
     1081 cctcctaaac aggtttcatt gacgagagtg agatttacca tcgcacctgc tcctaggagg
     1141 acttcatggg gaaggctttg ctaaccagtt
//
LOCUS       KCKM01000679             552 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10768apa ultra-conserved element locus
            uce-2416, sequence.
ACCESSION   KCKM01000679
VERSION     KCKM01000679.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 552)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 552)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10768apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>552
                     /note="ultra-conserved element locus uce-2416"
BASE COUNT          174 a           72 c          112 g          194 t
ORIGIN      
        1 ggtaacatta gcggtaagtt gggtttttaa acgtggaaga ctttacttta taaagcaata
       61 tcagaaaagt gttcctctac tttcaaagaa tggtgcagac atttgggttc atctgtttgg
      121 tcctgttatg acagaaatca ttacaagttt gatagattta tttataaaga cttgcttcaa
      181 tatttaaagt acatctattc cagcattcct catttcaagc tcggctgtgg atcaagatga
      241 aagaaaaatt aaattgtata ttgaagagct gttaattgaa ctgcactgca tttagcaagg
      301 gagcatcagc ttcaggcagt caatactaca gagaattttt aatgtactgt atcactagat
      361 tgtcagtttg tattggagaa tgcaaacata ctgctttgac tggcgataaa gccctggaaa
      421 cttttaagtg gttgagggga gaaaacgtta ttttgctttt atatgttgtg acatagttgt
      481 tgatagaacc aggaggaaaa ttttttttta ggtgaatatt attagaatat ctttttgtta
      541 ataaatattc tg
//
LOCUS       KCKM01000680            1038 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10784apa ultra-conserved element locus
            uce-2312, sequence.
ACCESSION   KCKM01000680
VERSION     KCKM01000680.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1038)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1038)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1038
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10784apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1038
                     /note="ultra-conserved element locus uce-2312"
BASE COUNT          321 a          205 c          193 g          319 t
ORIGIN      
        1 ataaacaagc tgacagttat gaatgtttaa cgtggtctca ttgaaaatta aacaagttat
       61 actggtcttc tcaagtagtc aaattcaaaa tgcatcaaca tctcctagtt agtacaagtc
      121 actgccattt ctataacaaa gtaatgaagg cacagctagt gcaagcagac ttaaacccgt
      181 tcagactact gggctgaaaa atactttggt tggttcttca ggagagagtt ttctctaaac
      241 aaatattggt ctcagttaac agttctgata atcttcacag ctgcagtcta atagctacat
      301 gacaaagact tcacaagaac caaactatgt agcaatgaat taacattcat gctttagggg
      361 atttactgca ttctacatat tggcagaaaa ttatactgtt aaaatgctag gtagattgaa
      421 cctacatttt aaactggttc ttatgtgttt gatttctttt tttcttttta ttttttaaca
      481 aactggttac ttaattctac caagatacaa aacataaggc tgtaagtaac taatagttgt
      541 gtttaggcta ttacagtgca ggtaatcctc aaggccacat acacactgct tcactgctgc
      601 ttgcattctg ctgggttttg atccttctgt tgaaagtaac agtttacagg tatcagtgtt
      661 ttaaaagaac tattagcatc gctaagcata ttttctcaag ttttagtatt caagttcttc
      721 tctctttttt cccttgaata actgcctagt aataccacca tctctggatg tggcaacatc
      781 cacagtgtgt ttattttggc tttgttagtg cacaggtacg taactcagaa caaaaatctg
      841 ttcagaaccg agcgtggtgg ggtactctac tagaaccggg gaaaggagga ggagagttat
      901 gaatagtaac aaaaagccca gctcagaagc acccaggcct tctttaaggc aaaagaagcc
      961 tcctgggctg acacaggcat ggccttgctc cgctgcagag caacacaaca acgcgctaaa
     1021 tcacggtaca ttcttaac
//
LOCUS       KCKM01000681             866 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10798apa ultra-conserved element locus
            uce-6706, sequence.
ACCESSION   KCKM01000681
VERSION     KCKM01000681.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 866)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 866)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..866
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10798apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>866
                     /note="ultra-conserved element locus uce-6706"
BASE COUNT          259 a          140 c          177 g          290 t
ORIGIN      
        1 ttgtggtggg atccaggtag tttggcagag ctgtttggga tagcttgcat aagatttcat
       61 tatagttctt ctctgcaagc attaaattgg atgcggtatt tgttctatat gaaataccaa
      121 tctggctatg gaagttaaac caactcaaat ttaaatgtca agaatgtaca aacctaacac
      181 ggaatcgaca cgtcttgtgg tgaccatttt acataattca gtgcttgagt ttgtacattt
      241 tcctaaagta gttcagaatt gggagcgcaa gtgtcttttg attaagtagg atgtgacttc
      301 cgctaatcag ttctttgcca ctacagagcg ctttcacagc cggcagcatc tgccttccaa
      361 actttgcttg ctggtagatt gttctgcagt ttgtttagca acagctgttg gatttgaatt
      421 ctaatgtatg aaaaattgat gattaacttc ttacctcctt taggcacata gagatgaaat
      481 ccagcgtaaa tttgaagccc ttcgtaatag ctgcacagtg agtattaaat acagatcatt
      541 gaattatttt gaaattaaga ataattttga aattaataac aaacaattta cttattgaat
      601 ccttgatgac actagttcct aaagtggact tctggcttca aggtgttagt aggagctaga
      661 cggattggat ttgatttctt tcaggtttcg ggtaaacctc aatttcgagg ttttagtctg
      721 atcatgaaat tgacactgtt cttctttttt gagaagaaag taaattaaaa tacctcattg
      781 cagtgcagct aataagaatg gtgtagcagc tgcaaaaaat gattgtaggt gaggatcttt
      841 tctactcaca agaagaaaag atctac
//
LOCUS       KCKM01000682            1065 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10813apa ultra-conserved element locus
            uce-4721, sequence.
ACCESSION   KCKM01000682
VERSION     KCKM01000682.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1065)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1065)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1065
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10813apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1065
                     /note="ultra-conserved element locus uce-4721"
BASE COUNT          303 a          215 c          237 g          310 t
ORIGIN      
        1 ttaattaaca cataagtgct gctggtcaaa gcactcgcag gtgatacata acactgctgg
       61 ggctgcacag cagttgctga cttctgggaa cgctgcttca gcagaggaag ttctggaaca
      121 ccagtgggaa atcttaaccg gttgttacta ttttggaaac accagtgtca gtgcataatg
      181 taccgtacga aacctcctcc ttactaaccc gggaaccagg ggagaatttt taggttgcct
      241 ctacctctgt ggtttttgta gtaaggcaga agtagatgca tttgaacagc ctcccaagat
      301 gggtttgaac tgttaagcta agggctgaag aagtggtgac ttgtctgctg ataatgctct
      361 atcttttaac tgcaacttaa ttccttttct acagaggagt atgtcacctg tcatacgtgt
      421 cggtcgccag acacaatcct acagaaggac accaggttat atttcttgca gtgtgagacc
      481 tgccactctc gctgctccgt cgccagcatc aaaactggtt tccaggctgt cacaggcaag
      541 agagcacagc tccgtgccaa agctaactag tttgctaatc aacactggat ttttgcaaag
      601 tgttctgggg agatatgact ggacaggttt acaatcggaa tggatttacc gttgtattaa
      661 aacaagattg ttaaaaaaaa cctatgagaa atttggcttt cgattggtct gtgaaatcct
      721 tgcaaggtgc agatcctcaa gctgttcaca tacatttgct cattgaatat attttaccaa
      781 ctgtaaggaa cgagatggga aaggaagtgc tttttaatcc attcagactt ctgtaaaaca
      841 caagataaat taaagatact ataacagtga gtgtcttcaa tttgggtttt tccttcagtt
      901 tcctcttttg aaacagccca tgggagtggt tggcagatgg ttcagcagat catgtcgctg
      961 aactatgtcc aagacccaga ataaagtttt taagatcaag gttattttgc ttttacatag
     1021 caagcttaac tattaattag gctattgctg accagagaaa ccagt
//
LOCUS       KCKM01000683             561 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10829apa ultra-conserved element locus
            uce-454, sequence.
ACCESSION   KCKM01000683
VERSION     KCKM01000683.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 561)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 561)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10829apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>561
                     /note="ultra-conserved element locus uce-454"
BASE COUNT          193 a           97 c          103 g          168 t
ORIGIN      
        1 gggctgccaa attaaagcaa gaattcataa aggggttcaa aataaggata aaagaccaaa
       61 aagagaatga ccaggtacca agaatgcttc ttagcttgat atttctttaa tttcacgtga
      121 atttcactaa gtaaatatgc cttaaaagtg aataaaattt tatttcactt taacaagaga
      181 atataaaagt taaaaaggtc actgtagtaa tagactaatc tcaattacca gggcagacag
      241 tgaaacccac aactcccacc taatctcatt cggtgcacac gcagtgcacc gtgtgatttc
      301 caacacggct aaatgaaatt ataaagcagt gttaaattta ttaataattt aattagctaa
      361 atgttcctgc aactactcgt gagatgaatg gcatgtcatt ttctaatgca atttgcctct
      421 cagccaggca gggtcaggag ggaagctact ggcatcttaa atgatctttt ttatattgca
      481 ccttctatta agggacagtg tgatatcgct gattatattt gagtcttgta cacaaggcca
      541 gggagttttc ttgttataat a
//
LOCUS       KCKM01000684             828 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10845apa ultra-conserved element locus
            uce-6718, sequence.
ACCESSION   KCKM01000684
VERSION     KCKM01000684.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 828)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 828)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..828
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10845apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>828
                     /note="ultra-conserved element locus uce-6718"
BASE COUNT          254 a          150 c          150 g          274 t
ORIGIN      
        1 agaacaacgc acatttgctt aagcttttaa aaatattgca cctgcagatc accagaaacc
       61 tggaagagaa catatcatcc ctttatccat agcgcatatt tagagaaatt caggggaggc
      121 aaataagatc tggtcaataa aggagcttct tgtcttccac acttacatcc ttctcatgaa
      181 tcttaaccaa gagaaataat aataagcggc agggaaggtt tatagcactt taaataagca
      241 agtgagcctc ctaaagctac gagcaacatt ctctggatat caaaaataat aactggtttt
      301 gcagcagtgc agcatggaag cacaagggta taagatatac tgtactttaa gctctgtttg
      361 atgaatctga gcacagttcc tgggggatag attactttaa accatgctct tttactttct
      421 aatcctgact tgatttgatt tgtactttaa tacagctgcc tggcaattca acagcaaata
      481 gagactattt atgtaatcat attgtaagta gtgggacaag aagaaactct ctagaacctt
      541 tttggaaaat agtttgttgt acttttttat ttattgaaca gcagggcttc aggcttttca
      601 gtgctcatta taattggttt tctgcttgaa ctttcaaaaa ctgtcatgtc aatactcaaa
      661 cagaattttt ttgcttacta tatggctgtg ggctctattt tctcatgtgc tacttgacaa
      721 agttcttgta atatcttaga ggcaagttct agacttttag ttgctattta agaaactgga
      781 aggcagagtt attttatctt cctcttgttc ttgtgcactt tcccacaa
//
LOCUS       KCKM01000685             685 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10860apa ultra-conserved element locus
            uce-6970, sequence.
ACCESSION   KCKM01000685
VERSION     KCKM01000685.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 685)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 685)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10860apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>685
                     /note="ultra-conserved element locus uce-6970"
BASE COUNT          224 a          143 c          138 g          180 t
ORIGIN      
        1 tgcgagctct taagtgacca agttaaagtg tacatgcaaa tgtaaggact aaaaataagt
       61 caggaactaa gcaaccagcc tggagagagt ggattctctc cctcccttta ctctggagag
      121 caaaaagcag ctgcaggtgg tattaaatcc cattggtctc agtagattgc agtctaagct
      181 attactctag gcaagggcat taatgaaaaa aaatggctct taggatgaag cacagttctt
      241 cctatttgtt ttctctcttt tttttctata ttttagcttg cagcactccc ccggtcaaca
      301 tgaaagtaca gcctgtgaac aggacagcgt tactggtaac ctggaaccaa ccagaaacca
      361 tctaccaccc tccgatcatg aactacatga tctcatatag ctggactaaa aatgaagacg
      421 aaaaggagaa gactttcacc aaggacagtg acaaggacct ggtaaaacga cagcaacaac
      481 cccaaacata tgtatcaagc tatcctttta ttgtcttttc tcagtagaag gaagcagagg
      541 aggaaaacag ttgttacctc acagacaggc tggtgtttga ctcacaatga gttgctgtta
      601 aaatgctcag cgttagttga atgttgccta acagactacc caaaacactg aagtgtgaat
      661 ttatagctta tatatagttt ataaa
//
LOCUS       KCKM01000686            1210 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10875apa ultra-conserved element locus
            uce-3139, sequence.
ACCESSION   KCKM01000686
VERSION     KCKM01000686.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1210)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1210)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1210
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10875apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1210
                     /note="ultra-conserved element locus uce-3139"
BASE COUNT          325 a          226 c          278 g          381 t
ORIGIN      
        1 gaaatgagca atgttataaa tacttctgca tttcctattg cactgaaaca cgtttattgt
       61 tgcgccaaca ggaaggatca gctgaatgac taagacacta gaaatactga gtatctctgg
      121 ggaagggatg cagaggaact gttatagaga tgatgttctt gtgggctctg atgctaacaa
      181 ttttcttttc cttataaagc caaacttgca aatgtgatgt tctctttccc tctctccctg
      241 atcctttagc tatcaccctc aatggaaaca attattatgt tggttttaca tagtttgaac
      301 tgtgtgttgg tgttgagtgt tgcagtgcaa cgatgctggt aataacggtc ttcccgtctt
      361 tccctttagg tctggataga tgcagggaca caaatcttct tctcatatgc aatctgctta
      421 ggagcaatga cttccctggg gagctacaac aagtacaaat acaactgcta taggcaagtt
      481 tccatccaag ggggtttagt gttttagcta aatgatgtaa ataaagtagg gacactgggt
      541 taattttttt ttaattaact tgctccatga catatgtgtg acttagggac tgtttgctgc
      601 tgggatgcct gaacagtggt accagttttg tgtctggctt cgcaattttt tccgtcctgg
      661 gcttcatggc acaagagcaa ggggtgaaca ttgctgatgt ggcagagtca ggtacgatgg
      721 tgttggtggc agtggtggtg ggcactgccg cctagcgtgt gagcaaagtt ctgcagactc
      781 aatcagctaa catctaagca ataaaaatgg acagggtttc ccataatctc cagaaaaata
      841 agcacattgt tgatttgggc tttcatctag agcagcaagg gctagccggg gttgtattgt
      901 ttattctgtc ttgattaaca gggcagccaa cacatttgct agagtgtgct aatccatttg
      961 agttgagatt agagttaaga taaccacacc attatctagg gtccagaatg ttattgaatc
     1021 aagattttat tccatccttc ttttcagact acctttattt tcattcaaat gtaagtagct
     1081 agtgtttctg gatttatcat agcttagttt tccttgctca tggcagagcg ctgcagaggg
     1141 aatatcacat tgaccttttg aagggacata caagcatata ctcccaagtc tcaatgaaag
     1201 gcaagagaag
//
LOCUS       KCKM01000687             513 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10891apa ultra-conserved element locus
            uce-6871, sequence.
ACCESSION   KCKM01000687
VERSION     KCKM01000687.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 513)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 513)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10891apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>513
                     /note="ultra-conserved element locus uce-6871"
BASE COUNT          133 a          129 c          127 g          124 t
ORIGIN      
        1 ttttttcccc cctcttctag gttgtttctg ctttcctcct cctcctttct ctgctcccca
       61 gcccatgtgt aaaagtagca ggggggcctt tattaaaggc aaagccccac ggcagcagct
      121 tcccagccaa actgctcttg tattactttt tgatgagttt tcaatttagg cctttgcaga
      181 caggggaaag aaggcgactt gagagacaga ggggggaaaa aaatgcaaca gatggggccg
      241 attgtgctct ctaggcaaat taaggaagac atctgtagct cccaaatact ggtggtctaa
      301 agcaattagt cccctgtgaa aaggggcccc tctgagcctc ctccagccaa tccgcgcccc
      361 ggcagcactc acgttacaat ggccttgacc acaattcagt gagccaaaaa aaagaaagat
      421 taatccagga ggagctgtgc ggccaggctg gagttgctag gcttaaaagg gaaggttacg
      481 tccgtttctg cccgagtttg gagcagaaaa ata
//
LOCUS       KCKM01000688             943 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10905apa ultra-conserved element locus
            uce-3520, sequence.
ACCESSION   KCKM01000688
VERSION     KCKM01000688.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 943)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 943)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..943
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10905apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>943
                     /note="ultra-conserved element locus uce-3520"
BASE COUNT          296 a          150 c          157 g          340 t
ORIGIN      
        1 ttatgaaaag tgaatttcct ctcaaatgtg ttgtgtctac atgcaagctc atgggaaaga
       61 tgatttctac ccatttacag atattatatt ctctcgtgat tactagttgg tttatttcca
      121 gaattccttt ctacttcatg tgaggtttta cactgaattt aaaatacatg tagcaattaa
      181 gaattaacag ttaaataatt aacaactttt tattttctaa atctttattg ttctctttgg
      241 cagtgttggt ggtacgtttt ccatggtact ttctatgcaa actagatgca tgcagtattt
      301 tattgtcaaa ataatgtttc aagtactaaa atggcaaggg aatactgacc gagctattaa
      361 taaaacacac cagcttttag ctggcaaagc agccttcttt ccatcaaata tgtctcagcc
      421 tttaataaag aaactcaagt ggtgtaggtg aaaaattact tttctcaccc ggtcatctgt
      481 ctgtcatgta ttattcaggt caccaatgtt tgtcctgaac tgtatcattc tgtagttgtg
      541 tcaggtatga aatatgttca gtgtaattcc atcagacttc acgaagttga ttagaacaga
      601 tcacctttcg gcatgggcac aagttatctc agcagattga gtgaaaaaga cttatttatc
      661 tttgccttat aataaagaaa gagatgagca aatttatcca ttaacttgaa aaggtcttat
      721 attttgtgtg aaaacaaacc gaaggcagta attctattga aaacacttta atacatgaat
      781 gtttctttga aaatatatgg ttgtgttgga agccagaaaa tataaacctt gagccacatg
      841 cattgtataa caagctttta aattattttt tttctcccct gagcaaaatc actggaaaca
      901 attaaattgg tgtttcttta tttttgatag attttaaggt ttt
//
LOCUS       KCKM01000689             976 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10919apa ultra-conserved element locus
            uce-6872, sequence.
ACCESSION   KCKM01000689
VERSION     KCKM01000689.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 976)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 976)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..976
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10919apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>976
                     /note="ultra-conserved element locus uce-6872"
BASE COUNT          337 a          183 c          190 g          266 t
ORIGIN      
        1 ggggaagtga ggaggtgagt ggccagtcat gagtgtaaca gtacgagcag ctcgtctttg
       61 aagggcaaat gtagtttgtg taaaagtgtt atcgctacac ataaaccaga acccgtcttt
      121 attacttcct gctctctccc caaaagaagg acttcagatg tcagaatcac tgaatcggat
      181 gcttccgaaa tcaagacttc acagatatac aaaaggcact gacataatat cagattacat
      241 aaaaatacac atccttttaa tctcctgtac ataatgtgct tacttttaaa acacgaaatc
      301 tgccccagat ggctaataat gtccatttga aaaaaaccaa caccacaata ttaaagggct
      361 aaaatatgct gtgaacagat tgagaggcag ttcatcctag aggagagtaa aaaagtgcag
      421 atgggtgtca aaaatagcca agtgtcagat ctgttcaagt atctccattc tggcacatgc
      481 tcccagtcac agctgttggt gtattctctg tatccaagtg caaggttttc taacactccg
      541 agctgacatt aaaacacact tcctgcttgc tactgcttta agagaatgct ggaaattaaa
      601 gatttattta atggtaaagc ttaacgagta ttgataaggg catacatact cgagtgcagc
      661 acatgccatt ttgattaaag atgcatgaaa ttttaaccag caggtagatt aagtaattta
      721 aatgccaaag gcttaatagg ttttcgaaaa cctccactct aggcattcca gcactgtttg
      781 tcaataaccc caaataacgc acacaaggat caaaagtgat gattatgtct gtttaggaca
      841 tttaaatatc ttaataaaac acagaaacag taaagcgcag gagaagatga gtttcataca
      901 aatataaggg aaacatcagt ggattcaaat gatgcaggat gcaattttct aaattgatga
      961 attgccatgg tatttc
//
LOCUS       KCKM01000690             809 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10934apa ultra-conserved element locus
            uce-241, sequence.
ACCESSION   KCKM01000690
VERSION     KCKM01000690.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 809)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 809)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..809
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10934apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>809
                     /note="ultra-conserved element locus uce-241"
BASE COUNT          229 a          129 c          128 g          323 t
ORIGIN      
        1 ccaagcccac aaacttaaaa tacgcatgca gaagctcata ctcgattcta attaacaaag
       61 cttacctttc tcttgaccat accctttaga ggtcatcatg taaactattt aaattgatag
      121 taatattatg caccatgaaa ttaattttac gttgtgtaca gtttttattg tgactttatc
      181 ttgtttcaga agtgcttact ttctgatttt gtggatatta ctgactggat tacttttatt
      241 ttggttttta cacaacagtt atattagaaa tttgctgttt tattcttacc ttcttagtaa
      301 aaatcctttt atcacacaat gggtaattta tatccattac cagccctttc aatccttttc
      361 agtggtgctg tcagtgcctt tggcacagta atgattaatg tgatctaata atagtgtgcc
      421 attatattac cttagtaaaa catgtaccaa catcctattc agatctacca aattcatagc
      481 ttcctataat atttttgttg aaagacagga ttactatttt tcaaagctga tttttttttt
      541 cctttaacat atttaatgaa attcacaatt ccttgccatg gtaatctttg tgcatgcgtt
      601 tgggcttgat gggtgaattt tatttcattc tgcagtatta tgatttgtta ggcaaattgt
      661 ttgacacata aggggagata tgcattacat tgttttgttt tgttaagggt gcattttaag
      721 cattcagtac cttctgatta ttctgctgta tttatcatag ggggtatatt tagaatgtag
      781 tatgcaagaa taagcgtttg ggctaaaat
//
LOCUS       KCKM01000691             598 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10950apa ultra-conserved element locus
            uce-6070, sequence.
ACCESSION   KCKM01000691
VERSION     KCKM01000691.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 598)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 598)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10950apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>598
                     /note="ultra-conserved element locus uce-6070"
BASE COUNT          186 a          108 c          122 g          182 t
ORIGIN      
        1 agatcagaat ctgggcttca gtaaggattt cggcaattgg ccccactcct atgtaggctt
       61 ttattaattt atttattttt aaaaacagac aattgcattg actttaataa cccttacctc
      121 aaagttcact tgaaagaaaa ctaataagac tttttattga agggggtcta aaaataaaag
      181 tgtagctatg gtcagccagg gtgggaaatt ccattgtggc tgcaagccca tggcaggtag
      241 agtggaattt aatgaaggaa actgctgtgt ttttgtgtct ttctgtatgt ttttccttta
      301 aaaccaagag ctgggcaggc ttcccatttg acctgatgtg acccaagcaa attgcttctt
      361 atataaaaac aactgcagac ttggagaatg tgaaaatgca ctgtatcctt tttctaactc
      421 agggaaaatg aaagcctgag aaacaggacg gccctgtcaa tactcgttga gcaaaactat
      481 cactcaagcc cgataaagag agattagaac aggcttcctt atgccagagg gattcattat
      541 aagttagttc tctttatgtt ttctttttaa acggacacac ttactgtcag taagagaa
//
LOCUS       KCKM01000692             965 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10965apa ultra-conserved element locus
            uce-6520, sequence.
ACCESSION   KCKM01000692
VERSION     KCKM01000692.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 965)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 965)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..965
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10965apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>965
                     /note="ultra-conserved element locus uce-6520"
BASE COUNT          276 a          188 c          190 g          311 t
ORIGIN      
        1 aagctgtgcc caacacgatg ttttagcatt aatccttaat gttattttat tgaaatgtgt
       61 aaacatgtgt atttttcact gtctcataca ccattataat tgctcttact ctgttaaatt
      121 cagatgtaat ttaggatggg gaaaaataca ttttagaatt acacctgcag catgtagtgt
      181 tagtatgact tttccgtggc atgagagtga tgtttcaaca atctatacat attgatttag
      241 gctgataata aacaatttga ttaggcttta tctataggct gtcatttcaa tcactgtcac
      301 tggtccaata gagtggaagg cagctagcag acacatatgg caagatttct caaaataaaa
      361 actctggcct gattagagcc ctaggttcag tgaattggac aagacagctc agctgccagg
      421 ttattaactc cctcagaaaa tactctgcct tttccctggg gccagcctga atattctgat
      481 ctggatcgat aagcaatctc cggtgtgtac aaaatgccag ctagaatcat ttgtctcagt
      541 gcagtctcct tccaaaggat aaaacacctg cagtatatag ccttctctcc ctcctccccc
      601 accttcccct ttttaactaa tgacccacaa agaaggaaga agtaaccgaa tctattccat
      661 catcaggaag gctctctcag gtttgtttta atgatcacaa tggctacctt tcaatcttat
      721 aaaaattata tcagtcatgg tttccctgtg gcatgtttat gtaagtaatg tgaactgcga
      781 tgtaatgaca agtgtacaga tgtcattgta agagggccct tggcaagaag atagctcaga
      841 atgtcagaat tttaataaac agcagacggc tggtagggtt ctctttggtg gttgtctttt
      901 atatttgtaa tgtgtgctgt gatctgttgc ttgggccaga gatttttcta gagtgtttag
      961 caaca
//
LOCUS       KCKM01000693             502 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10981apa ultra-conserved element locus
            uce-1018, sequence.
ACCESSION   KCKM01000693
VERSION     KCKM01000693.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 502)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 502)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10981apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>502
                     /note="ultra-conserved element locus uce-1018"
BASE COUNT          167 a           64 c          102 g          169 t
ORIGIN      
        1 acatttcaca tacataaaat atgtaattaa aatgatgaat tattgtaaga tagaatatta
       61 gccttttgac attttaatct gagcaggaga gagtgagaga gtgcgttcgg agccgctcaa
      121 ttaaatttag aattttttcc cctccattgt tatgaataaa tagaaagatt ctgtagcagt
      181 ctgcggaatt attaattgca agtactgtag aaggtgcatg caccgtatca tgaaatggag
      241 tatcattgtt agtgactata tttcttggta attaaggccc agactaatga tgcaagtttt
      301 cttcagcatg attttcatct gattatgagg ctgcttcatt aagagcactc agactaacga
      361 gctgtagctg taataaagta attttctgtc ttgtgctctg attgataaag agtttctata
      421 gctaaaagga attgaaaata taattataat tagaaatggt tgaataaagt tattacagga
      481 ttgctgaagg gtagtgcaat tg
//
LOCUS       KCKM01000694             880 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 10997apa ultra-conserved element locus
            uce-7357, sequence.
ACCESSION   KCKM01000694
VERSION     KCKM01000694.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 880)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 880)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..880
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10997apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>880
                     /note="ultra-conserved element locus uce-7357"
BASE COUNT          263 a          147 c          173 g          297 t
ORIGIN      
        1 tttgccccag tcttaaggga tgtcatcaag gaccatcttg tatgttactg gagttcgctg
       61 ttgtatcaag ctaatctcgg atatcaacta aagccaacaa atcaaccctg tgcagctttg
      121 cagtgagtct gggaggactc cgctccacgt tcttcagcct ttttaatttt tatcttttgg
      181 tttggttttg ttcatgacat atttatgatc agtggggttg agatgaaagg actttatgta
      241 tacacatgca aaaatcagtg ctatactttt tttttggtct tttaatgacg tttcattcaa
      301 acaagctctt tctatgtagc cagagttctg cttaattaga tatttaaatg attggagcaa
      361 tgctatttct ttaactccta actgcgacaa acacatacga aacatactgt tggcggcatt
      421 taatcaacag cagtcaattt atcattttca cagttttagt gagtggttat gaatcactaa
      481 aatcacaggt attgtagatg cagtgttgtg gcactatcat taacaaatat acggtgcaca
      541 gagggatgac ttggtaattg agtgggacta ataagaatac atcatttagc tgtgtgtgac
      601 aaactgtgcc tcaaaacaca accatggaaa attcacgttt tgcttaataa ataaattaca
      661 cagccaatgt attatacata atttgtgtcc tcatggattt gaatgatata taatgcatgg
      721 tccaagtcat ttatttatta agactaacta tatatattgt aggtggggaa ttttaaactc
      781 tagagtaaga cctgcatagg taactgttac aactactgag tttgattggg cagcaaatga
      841 ggctgtgtat ttggggacct gcaaacatag gcaagtattt
//
LOCUS       KCKM01000695             746 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11013apa ultra-conserved element locus
            uce-6992, sequence.
ACCESSION   KCKM01000695
VERSION     KCKM01000695.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 746)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 746)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..746
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11013apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>746
                     /note="ultra-conserved element locus uce-6992"
BASE COUNT          243 a          141 c          140 g          222 t
ORIGIN      
        1 caaataaatt gtctgaattt acacatgaat aatccagccc agagttaaat tttactctgg
       61 ataatttttc agtagcttat aaagggccag gctttaaaaa gaggaaccga ggcaaacatt
      121 gcctctgtat gttctgttga tcttatgtga gaattggttt aacattaaca acgtacgccg
      181 cacaaaaact catatgggct gaacattgca aggctgccaa tttaatttga aatgacttga
      241 cagaaaatct ctaggccacc aaatgctatt ataaagcact gtattctcat taaaggtctg
      301 agcccttttt tttctccccg agggcagcct cctcgtgagg ctgtccctct ggcataacat
      361 gtgatagagc taatctgtct tcacttggac agcattgcgg atatgcaaac ccaggtggca
      421 ctaataggtt tacagtaata actatggaat tggatacagt atgttacact gtgagaaatt
      481 cccacagatc aatttttgtg gtgaaggtta accaacagac atagaaccgc aatacgcttt
      541 tttcatgggt ctgttaacaa ttttatggtt ttaaaaagaa aagaagaaag agtctcccat
      601 gttcgaatgg aatataaata tttaactttt caaacatatc tacaatatat gtgcataaaa
      661 aatgctctct tggaaagaca acttctgttg tcagttattc cagcacagat ctggaggaat
      721 tccattggct tcaaagaaag atacca
//
LOCUS       KCKM01000696            1094 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11029apa ultra-conserved element locus
            uce-1194, sequence.
ACCESSION   KCKM01000696
VERSION     KCKM01000696.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1094)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1094)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1094
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11029apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1094
                     /note="ultra-conserved element locus uce-1194"
BASE COUNT          344 a          239 c          231 g          280 t
ORIGIN      
        1 gttgaacaga agttgtcagt aggtggtctc ttaatatctc accagttttg aagttatgaa
       61 aaggagcaag actttttgaa atccagaaaa gaaagaaaga aaagctagaa accgagtgaa
      121 agagcagagt cgcagcaccg gtgacccgag aaacctcatt gctccactta tactggcaca
      181 atgtcatgtt ctcagccact ccatcaccag caaggggaaa aaaaaagctt ttcctttcct
      241 tttagtcaaa ggcagtgggt aagcagagca cgcggttcag agggtcatta aaaagcatca
      301 aaggaggcag cctcatgatg gtaataagac ggctgcaagg aaataaagtg ggcattgatc
      361 tgcactatcg agtgtgacat tttaaccgaa gctaaaagcc aagagcagat ctagccctct
      421 tattcatctg cctgcctgtt ttagtaaatt gtcttttttt ttcctccaac cagtggcctc
      481 agaggtcact tcatattagc tggcttgtta ataccgaggc aatcaatact taatcaacaa
      541 gtaatgggat tttgcagtca tcctgtatga tctttcaata aagccctgaa tctatctcag
      601 cccattcaga gcctgactaa aggtgcacga ttgctgcaga gcgaggattt gatggtctga
      661 tgctcttagg ctgatctgca tctgattaag acaccatgca gccactgtcc ttcacccttt
      721 tgttccttta tccccgtata atgtagcatg gcacagaaat tcgtcatctt agcttttaga
      781 tgcaacagca aaggaattaa tacttcctta gtgcatgagg atccagcctc ttggtcatga
      841 tatgcaactg aaaaaaacca acagcaaagg ggaaggaaaa ttacaggaga gacagtgaca
      901 agtttcaacg tattgcctta gaaaacgcag ttataacaaa tggatccaaa ccagcctttt
      961 catctctacc ctcgctatcc tccttcccga gagatgtgct aatgcaacag acatagtcac
     1021 tggacgtggc tatacaagaa gaggtattac aggtgattca ctgcatcaga aaaaggagca
     1081 aaagccaaca ttac
//
LOCUS       KCKM01000697            1153 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11045apa ultra-conserved element locus
            uce-6426, sequence.
ACCESSION   KCKM01000697
VERSION     KCKM01000697.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1153)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1153)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1153
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11045apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1153
                     /note="ultra-conserved element locus uce-6426"
BASE COUNT          244 a          308 c          241 g          360 t
ORIGIN      
        1 tatcatcacg gaagaaaatt aactaattac agttttcttt ttgtcctttt gcttttgcgc
       61 cttgtttgct gctcttcctc tgtcaccagc cacctttgct tggcactgac tcccaccagc
      121 cctcaccatc ctcacagcct ggcccccatg tatcttcagc aaagcttcgc aggagatgca
      181 aggagagcac tcgaaccaag tccttaggtt ctgaggcgcc caaggagagc gcctcaaagc
      241 acagcgagcc agagccggac tctgacagaa aggggcgagt ttgctctgct gagcaagacg
      301 tggctttcag ctataagcaa aaagctggca aaggcggaac gttgttttcc ttctccttgc
      361 aacttccaga gtcatttcct tccctcctgg atgacgacgg ctacctgtcg ctccctaacc
      421 tctccgaaac caacctcctg cctgccagcg tgcagcacta ccttcccatc cgctccccgt
      481 ccctggtgcc ttgcttcctc ttcatttttt tctttctgct ctctgcctct ttctcagtgc
      541 catacgccct cactctctcc tttcctctgg ctatgtgcct ctgctacctg gagcccaagg
      601 cggcctcctt gagtgcctca cttgccaatg acctgagtga cagttcagag gaagaggtgt
      661 gtacctcggc atcgaacaca ctctttttcg tgttcagtgc ttcagtccta accagtgtta
      721 gattgctgca atagtggtcc tactttcaga gcctcatttc tgtctgtgct gatatgttag
      781 aaggggtggt ttcggtttga tttttttttt gtttgggagt tgttttgggg ttttttcttt
      841 ttttttttct tgtgttggga gtgcagcttg gggcccaggg ttaggcacaa cactgtgtgg
      901 aagtggcttg gtttgaactg tgtcagctga tgcaaagtga cttgcactaa acaaattgct
      961 accctgaagt attgtatctg aacccaccaa gacctttttc tcccccatat cagttatact
     1021 agggttaaag tacttatcta aatagcaggt attaagtaca atttcctgca taattgcata
     1081 tgcaatatat atgcaaatgt gtatacatta tatttttaac tagctacccc ataataatgg
     1141 aaactcacca tct
//
LOCUS       KCKM01000698             795 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11061apa ultra-conserved element locus
            uce-3356, sequence.
ACCESSION   KCKM01000698
VERSION     KCKM01000698.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 795)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 795)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..795
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11061apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>795
                     /note="ultra-conserved element locus uce-3356"
BASE COUNT          242 a          145 c          159 g          249 t
ORIGIN      
        1 ctttgcagaa ggagggagaa ggctgagaag cctttctgtt gcagctctca tactcttgtg
       61 tttgtccatt atgcccgtta acaactacac tagcaacaag cagcagattt tttttttcca
      121 ctccgtgagt aattgtctgc acagcagtga cagatgtgca atatagcagc ttcttcagga
      181 aaaaattaac agtttgtcca gcatgtcagc tcgctctttt tagtgcttcg gaggtcttgg
      241 ccccattatg gatgatttag aaattgaggc aagctaagac cagctgcctg ggttgaaagc
      301 cttagttagt agccctcatc tgcattccag tattcactta catctagaaa ttggtagggc
      361 ccctctggcc acaagatgag tatgggctga caatgccttg atttgttgag agagagaata
      421 aatgggtttt tcagaagatg aggaaatatc accattactg gccaatttac agcattttat
      481 ctgttcttca aacatgtcac ttttgttatt gttgcatggt aattacatag tgaaatggaa
      541 agaaaacaaa ttctggttac atattcagat ggattgcaaa atcatataat cctgataaat
      601 gcccatttat gatacacacg gatgaaaggt tcattttaat tttgaatagc tagcacagcc
      661 ataaatagga tataggatta gatcccacag aatctgatta cctaaaagca aatagtattt
      721 ttcttcactt ttttcataac caggaaattc aatgtgtgca gggtatttaa ataagcaggt
      781 tttccataaa aatat
//
LOCUS       KCKM01000699             795 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11077apa ultra-conserved element locus
            uce-1868, sequence.
ACCESSION   KCKM01000699
VERSION     KCKM01000699.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 795)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 795)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..795
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11077apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>795
                     /note="ultra-conserved element locus uce-1868"
BASE COUNT          239 a          160 c          142 g          254 t
ORIGIN      
        1 cgctcatcga ataaatgtca tgagttgtta acaagcacag tgtcaagcag ggcaaaatgt
       61 aattctccat tttttttaat tactggaatt aacagaatat ggcactaatt tctacagcta
      121 ctgcttctcc ccctccccga ccatgaggct tgatttgtgt tcttattaac tttgtcctat
      181 aaatgacctt gcaaggagag tggttctgga ggctaagtga aacaatgtct atattttctg
      241 aagctccagg ctaagtttta ttaatgtaat gtctaagatc tttgaagttg tgactttacc
      301 aggaaaatca taatctccaa acctttattc ataatgggta tgacttccag ggggaacaga
      361 atacctgctg tgctaattat ttcaattatc agctactact aaaacacgta atggattttc
      421 tctgcttcca caggtaaaag gcatgacatt acggaactta actctgatgt tgtgaacttg
      481 atctcccgtg ctacacagga gagattacga gggctcctag aaaaactaac tgtaattgct
      541 cagcacagag tatcaaccca caaggtaaaa gaaatcatta agcaagtttt gcacctaagt
      601 tttcctgctt tgcagccttg aaggagaacc ttttccaagt acaggcacat cacacgcaat
      661 atgtgcattt tcagtatcta ccaaaggctg attttatttt aactgtttat agcctctaac
      721 tattccttac attttccatt caacttgttg gataggtgct cttaaaaccc agcataagag
      781 taaatgtatg tgttt
//
LOCUS       KCKM01000700             757 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11093apa ultra-conserved element locus
            uce-3373, sequence.
ACCESSION   KCKM01000700
VERSION     KCKM01000700.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 757)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 757)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..757
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11093apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>757
                     /note="ultra-conserved element locus uce-3373"
BASE COUNT          224 a          172 c          175 g          186 t
ORIGIN      
        1 cagcagagca gcagcaggaa agggagaact ttttccttcc aagggattca cgagcacaat
       61 aagatattta ctgtatttat cgtagagatc aaaccccacg cagatgtcac atttcttgaa
      121 ttccatcagt agatcagaca agcaatccct ggaaagagga cattgcagcc agaaagttca
      181 gagcgtgcag gcgttggagg gccattcccg ctccgatttc tgtcatgcac cctgagcctt
      241 tgttgtctcc gcaatgctga taaatcaatc catcaaaaaa tttcctcagt gaaactcaat
      301 caagaaaggt catgtcagcg ggagaggaac agattaaatt agcatcaaat tagacatgga
      361 aagtgagttc tgtcaaaatc atcacagcgc tcagcacaat tagaatatgt taattatgca
      421 tttcattaag gtagtgctct ttgaatgcga gatgaaatgt cagtggtgta ggcatccgaa
      481 aaaaggaaga ttgccaggca caactttctc tagacaatgt gtgacacctt cattaacatc
      541 aagaatcaca agtctgtctt gacttttttg taaagtatta aaccgttaac tgtttgctgg
      601 cactcagagg agggagagcc atccgcatcc ccagctcgct cagctccgct gccagctctc
      661 ctgccctgcc aggagccctg aggaccaacg agactggcca gtgggcactg caaaggtggt
      721 tgcgatttaa tgaagccttt gctggatgtg ccgagga
//
LOCUS       KCKM01000701            1129 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11109apa ultra-conserved element locus
            uce-5382, sequence.
ACCESSION   KCKM01000701
VERSION     KCKM01000701.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1129)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1129)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1129
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11109apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1129
                     /note="ultra-conserved element locus uce-5382"
BASE COUNT          368 a          182 c          226 g          353 t
ORIGIN      
        1 aaataatcca aagaaataat actagaccat ttttaattac aaatgattga agcagcaagt
       61 atcagctaag gcgaatgaaa atatagttgt gcaatccaag taagaggaat gtcgagaata
      121 acaactttgt aactacattt ggaaaaataa acaatgcttt cctttctaca taataaatgt
      181 ggtgtgggta gtgaaacata acgttttaaa aatgctgtaa catgttttta tttctactgg
      241 ttcaaaacaa cttgcttctt gaaattaaat ggaatctgat tgaggttctg tcctttcaga
      301 gagtagactt gtacaaggta atgtattgac tgccctactg ctattgtaat ttttctagta
      361 tacatagaaa ttctcatact gcaagttgct ggggcccttg atatttcaca aattggggat
      421 cattaagaat gttttccatg tcagaactat actaattgtg actgtgttga tgacatccag
      481 cattctactt aaattggaaa ttgctgctta ctaaagaagt tagactctga gcttaagtcc
      541 ttggtgactg atttgattag tccgtttgag tgagaatagg gcaacacagg ggctatgtta
      601 atggaactta aacaataggc catcactaat cagagacctc aaggttgaag tgaggttaat
      661 tgttatgcgg gtggtatttg aaaagaagtg ttgactggtg taatgcacta tgggactgta
      721 gtatttgaac atgcagccct aaggccagag gttttgttta gcttcccaat gaaatttaaa
      781 gctacattat gtacatctct aaacaacagc ctatatgcta ttgccttttg atacatcaca
      841 agaacaacta ctaattgata acagaaatga gcccccaggc atgacatgtg gatccaaatc
      901 tggtactgga tttcaatccc tttctaaagt tggtgaggtg ggaattgact gagttttgat
      961 taagcccttc atgaaatgca catgcaagat tcaaatcact gtgctctccc ccagaagtgt
     1021 aggaaattcc aaattcagag tttcagttta gtcctagagt gcatgtttgg tggaaacata
     1081 tgagctgaca aaaacaatgt cttaatgcaa aaacattttg atgtaatta
//
LOCUS       KCKM01000702             777 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11125apa ultra-conserved element locus
            uce-5716, sequence.
ACCESSION   KCKM01000702
VERSION     KCKM01000702.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 777)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 777)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..777
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11125apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>777
                     /note="ultra-conserved element locus uce-5716"
BASE COUNT          263 a          101 c          147 g          266 t
ORIGIN      
        1 agagctagtg tgccatataa gactttaatt ttctgagctt aatatagtat ttacatgtct
       61 gtgtaagcaa gagaaaaaag tatattcttt gtgccttgta ttttggggga gagctatcaa
      121 tataagctgg tgaggttttg tatgaagaaa accctgaaaa aaacaagatg tatagatggt
      181 aaggttatag gtttttaatg tatttgttcc agctcttaaa atttttgaat gtatatagga
      241 atatgttgaa aatgtagata tatgccacag agtctatgta ttgtataaaa gatggctcta
      301 gaaaactcaa tttcggtact ttggccggaa gaaaacaaat acttgcacat taatgcgatt
      361 gtttattttt gtaccaaaga caaatgcaac tgatatggcg aactgccagt ctaagtaaag
      421 ttttgcacag cttacatgat actgtactga atgtaaaaac aaaagaaaaa aagaaaaaaa
      481 attaaaggtc agggttaggg atcttactga actgtgaatt tttttgtttg ggtccaatta
      541 tctacagaag gagcattcat acataacaat attattttgc tgttcttgta cttcgcttcc
      601 atggtagata agttggtggc catctcggag tctttaaatc ttttttctct gcacttactg
      661 taggagattt taatatattt ggattttagt aagctattgg taaaatagtt ttcaactttg
      721 agaatttaaa aaaaacctat ttagcttgtt gtagtatact tccaccaaac aaccaaa
//
LOCUS       KCKM01000703             836 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11141apa ultra-conserved element locus
            uce-3907, sequence.
ACCESSION   KCKM01000703
VERSION     KCKM01000703.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 836)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 836)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..836
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11141apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>836
                     /note="ultra-conserved element locus uce-3907"
BASE COUNT          238 a          159 c          135 g          304 t
ORIGIN      
        1 tttcatgcat gaccatctga agcacaacat attccacacc atttagaact atctcaggtt
       61 ctctttccct attaatcacc tctacttaat ttaaaattta ccagacacct caccactgag
      121 gaatatttca gtttaaatat ttgacttagg ttgctcatct tttgtttaat gaccaacttt
      181 ttatacggat ataaaacagt gtttaaaatg tagttttgtt ccctctttct gaatagactt
      241 ccactattac tttttaccaa gtagtttcat tgaaaggttt gcagcgttac aggtaatgta
      301 aagtccatta ggtcaggctc ttcatagcat gacatgcagt aaattacaag tgcttcaagc
      361 agctcagtga attacagttc atcactttga aaggttccca ctacaagact acagatatca
      421 gatctggcag ttaggatcca attaacactt tggtcagaat aatcagattg cgtgtgtaag
      481 acttgtataa ttcgtttatt gcttccatgc atcttctgtc tgtaggtaaa tttgttgctg
      541 ttatttcaaa gcttggaatc agtatttcac ttgcctttag gttatatttc aagttctttt
      601 gcagtgaagt gatgaactct ccctgttcca gcaatttaga tcacttgtcc tgcagatatt
      661 actgcttgaa aaatggtttg tttctggtgg gtttgttttg tattcttacc atgtcattat
      721 atgtctagaa aaaaattgct agcaattttt actaagcaca ttttatttag tgtaacagag
      781 acagttttct ccaacgtgat cattgtgaat ctcacagaac acccagatac actgta
//
LOCUS       KCKM01000704             740 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11157apa ultra-conserved element locus
            uce-1435, sequence.
ACCESSION   KCKM01000704
VERSION     KCKM01000704.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 740)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 740)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..740
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11157apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>740
                     /note="ultra-conserved element locus uce-1435"
BASE COUNT          223 a          111 c          130 g          276 t
ORIGIN      
        1 atggaaagtg gtttcactac tggtacagta tcagcaccga agggtttatt ccagcaagca
       61 ctgtggttga gtgacatcac ctcaattttt tattatcctt aaaatattgc atttttcata
      121 ttctttattt ataaaggaac aatgctgctg taaatacagg tatttttaat tttttatttc
      181 attccatcac catgagatgc agttccctgt ttgtttaagg ggtatataag ctttctaatg
      241 gtgtcttcag aaatttataa aatgtaaata ctgattttga tggtccttaa gatgtgttta
      301 actgtgagac tatttaacta atggtgtgga tgtgatttgt catccagtat taagttctta
      361 gtcactgatt ttgtgtacaa aataggaaag agggaaactg cagctttcat tacaaacttt
      421 ttgaatttgc cagctctctt gagttttagc aaactaatta tgcctctgga tagtacatca
      481 agcatttctc tctggcttta atttgctaaa gctgtgcaca tatgtaaaaa aatagattat
      541 tttaggggag atgtagttct agaattattg cttatgtcat ttcttaagca gttatgctct
      601 taatgcttaa aagaaggcta gcattgtttg cacaaaaagt tggtgatccc cccaaaaata
      661 gtaatgaaat tacttctgtc cagtcaactt tgtatgtcat gtcaatttat aataaaagct
      721 gaaaaaatac ctttgttttc
//
LOCUS       KCKM01000705             576 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11173apa ultra-conserved element locus
            uce-6230, sequence.
ACCESSION   KCKM01000705
VERSION     KCKM01000705.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 576)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 576)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11173apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>576
                     /note="ultra-conserved element locus uce-6230"
BASE COUNT          159 a          138 c          147 g          132 t
ORIGIN      
        1 gaggcagggt gggtctgccc ggcaccgaga gggatccagc caagtttagg atgcgggagg
       61 tgcgctggcg agagaaaggc gacacgtccc ctttaaaagg aaatataatt tacagtgtgc
      121 agccaggcgg cccatagttt caatctcgtt tactatagag aaaactctgc tagctgttct
      181 ctatcccaca aatccgattt aatcagacaa gccagccagc gtggcttgaa gtaaaaacgg
      241 ataattagta aacagagagc tacttcagtg cttcattggc attcgagccg ggctagtgtg
      301 tcgcatttaa aatgcagtct gatgaagttt acaaaatcaa accatttgtt actcctattg
      361 aagaggcttc aggccacttg caattaaatt ggaattagtg ctcagaatga gatacagcaa
      421 attcatacta aaaagggatc tgactttcag acatttgact tcaagttttt cccctcgcgc
      481 acgcgcgctc ctgccagacc cccacagcgc tgccaagctc agacccccga cgcaggcggg
      541 tgtactgggg actctctggc agcagaggac ggggga
//
LOCUS       KCKM01000706             952 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11189apa ultra-conserved element locus
            uce-7985, sequence.
ACCESSION   KCKM01000706
VERSION     KCKM01000706.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 952)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 952)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..952
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11189apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>952
                     /note="ultra-conserved element locus uce-7985"
BASE COUNT          305 a          165 c          194 g          288 t
ORIGIN      
        1 aaaatctaca gtgtcttatt agaaaattag agaaaaaaaa attgttctca tcacagccct
       61 tcgttgcacc atagaagttt gaatctcata tagacgtggt gtgttggagc agagagaccg
      121 agtgtaattt tttgtgtgaa actttgtggc tcacaatact ccttctgtga gggaactgcg
      181 tccagtttgg gactgacagg cagcctacaa gctttgtgcc ggcacactaa tcccttgtct
      241 gtgggttact gaaaaactac ttgcattttt gttcccagtt caccttggtg aaaaagccca
      301 attccacata tgataaatcc agagtctgca gaaaggcagt cacctaattg cacagtgaag
      361 cagaagaaag ccttgcaaat ggtatacaat tttcaaagtg ttccaagcct taggcaaaag
      421 cctttcaact gtgtctaaaa ctgaatgata aaatatgttg tacaaattat ctgtgaacag
      481 gaaacatgtg gtagtggcag gggactgaaa tgtaacactt gtaaagaaat gggaactgcc
      541 agtcatttat acccttttac ttttctctca gtcacaagtt ccatcatatt tttttttacc
      601 atcagttgat gttcaagttt ataataagac atttatcaga tctcactagg ccaattacag
      661 ctttgtagca aaaacaacaa tagcctatat gaagccaaag gtttagtttt gtccctttct
      721 tcgtactttt atagagtttc tgttttatca ttgtgaggat gtgtgtgaat ggaattttga
      781 aagagcttca gtgctgcaga aatgtctggg atgacagtca tctgcacttt agactaaagt
      841 aatcataagt tgagaaaagt ttctcaagtc ttgtctataa aacagtatta aaaaatgaaa
      901 tagagagagt gagaggaaga aaagggaaat gcacaattac tgttcagcag ga
//
LOCUS       KCKM01000707             763 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11203apa ultra-conserved element locus
            uce-1523, sequence.
ACCESSION   KCKM01000707
VERSION     KCKM01000707.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 763)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 763)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..763
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11203apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>763
                     /note="ultra-conserved element locus uce-1523"
BASE COUNT          241 a          166 c          159 g          197 t
ORIGIN      
        1 tggagcctga tcaagaaaag tcacaattaa aaaaaataaa ataagcatta ttcttggaaa
       61 gaatgtctca ttttcttcct tccttttggc agtttccaag gctgccgtag attgaagaaa
      121 ataggaataa gcatctttcg accacaaaca gatgtgcttg ataaagaaaa tgtcagcaaa
      181 aatactaaag caatgtgtca cagcagcttt ctgacagata gagggaaaag gtaaaaaatg
      241 ttctatcatg tccgacaagg tgttcttttt gagatttaaa gatcactgtg caactttaaa
      301 catgtttgtc actttggctc tgactggagc tatctggagc ttcacaagaa ctttatcagc
      361 tcagcatagg ggggaagaaa gaagcccatt cccatttatc tcagccaggt tcccttcaaa
      421 gccaacaaat aaattacagt gtacatttga tacaaattga tttcttaact caaataacaa
      481 tgttgtcctc ccagtcaggc catgtgtcac tcattcgcga gcctgagtga aaggctcaat
      541 ctgtctgcgt gacagaaata ggcctgacgc atctcaccga ggaatgctaa taaccccggc
      601 ctggcccggg cctttgtggg caagccgtga taaggaaaat cagcccgtcc tgtcaaacgc
      661 cacgaaggcc tgatcggtgt ttgttccaac aagctgcata ggcctcagag tcgccatcct
      721 atttcatgta gtaaatgaga ggaaaataag atccggctac cac
//
LOCUS       KCKM01000708             656 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11218apa ultra-conserved element locus
            uce-5895, sequence.
ACCESSION   KCKM01000708
VERSION     KCKM01000708.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 656)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 656)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..656
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11218apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>656
                     /note="ultra-conserved element locus uce-5895"
BASE COUNT          213 a          142 c          124 g          177 t
ORIGIN      
        1 aaaaaagaca tgttctcgca gcctgaaggt taaactggat taattctgaa aatgtggaaa
       61 ttgatacact ctaatttaac atgtgctcaa catgtgtgct cagcagcaac tgaaaatgaa
      121 atatcttaaa tattatcaaa cgttacatca ttaaatataa attagatgga aacaggggaa
      181 agctaaaaat tgactaggag ttcagctact ctaaagggct aatacgtcca tttttcacct
      241 gaagccctct ccaatacagt tttgccatta agcaaaaacc taaagaaagg taatcaattc
      301 caactaaaaa gcacttctcc cggaatgact gcacttcaaa cccctggctg gctgccagcc
      361 cccccagaca acagctatca atgtttctga ctatcacagg agcacgaggg gccatgcata
      421 attgactaga agatgggcta aaactgtgcc caatcagtgt gtgatcaaaa acgcgtggaa
      481 tattcagcgc cacttgatta catggaggca cgtccttttg ctctcctcat gaaatctctt
      541 caaggtccag agtactgtaa taagatcatt actgtcaagc ggtacgaatc gcaggcaatg
      601 agtcttggga taggaagtca tacttcacaa gctcctctgg tctttttttt tttttt
//
LOCUS       KCKM01000709             873 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11234apa ultra-conserved element locus
            uce-843, sequence.
ACCESSION   KCKM01000709
VERSION     KCKM01000709.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 873)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 873)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..873
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11234apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>873
                     /note="ultra-conserved element locus uce-843"
BASE COUNT          229 a          223 c          205 g          216 t
ORIGIN      
        1 tgctctcaga aaggaaccag ctgaaagcaa gcatgggaga attgttagac aacttctcct
       61 gtctttccca agaagtgtgt agagacatgc agagcccgga acagatccaa gctctccacc
      121 gatactgccc tgttctcaga cccatggatc tccaggcagc caccaccatc agcccctccc
      181 cagctggcgt ggagcagggc ctggtgacct cccagtgcgt cggggaaggc atgcagtgct
      241 gctcggagca aggctcggtg caactgggag cgccctggct gcccaacaac atctcagaaa
      301 attgttcggc cggcgggggg ttggatggag ccgacacagg tacttacccc gagagagagc
      361 ttccacctga gcagagcagc caaacggtca cggtagactt ctgtcaggaa atgactgata
      421 aatgtacaac agatgaacaa cctaggaaag attacaccta gtgacttgta accttaacgt
      481 tacacctggt caggtgttct tcagtcagcc agtggcagtg ttcatttgtt gtctagaaga
      541 acgtatttgg tgcacactac agtggtctta gcagcaatac tgtttttaag tattccctcc
      601 tctctacaag caggagttct cttcacaatg gtgctatccc tcgctcaggc agggaacgaa
      661 gcagtggcga cactgtctgt ttttgtatgt tgatttcaat cttaacaggg atggacataa
      721 cacctctgag gacccaaccg cagctttttt tctcagtggc ccatgtcaca aaaccctaac
      781 tcaggaattt cctctgaatg ttcaattttt cattgaagac agcttcttta cacatcaaag
      841 ttttatagct aaactgtaca tattatatat aat
//
LOCUS       KCKM01000710             770 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11250apa ultra-conserved element locus
            uce-3105, sequence.
ACCESSION   KCKM01000710
VERSION     KCKM01000710.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 770)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 770)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..770
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11250apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>770
                     /note="ultra-conserved element locus uce-3105"
BASE COUNT          199 a          141 c          172 g          258 t
ORIGIN      
        1 caagcaagct taatgttttc atcgtgtgta gcatcccttt tgaattgtag actctttatt
       61 gccactatta tggttgagag ctcttcctgt gtttctttcc tctggttgtc tttagtgcac
      121 gatatgtgaa ttttagaatc caagtttaac gtgtgagtgg cctgaaaact tagctgctgc
      181 ttagtcatga gataaatcca gctcctcctc tcctgtgact aacagatgga tggatccgct
      241 atgtcatttt aaaggaataa ttaaaagctt tattaacatg caagatgaaa tgaccagaaa
      301 tgactgcacc ctgcttctag aagtgctgac atttgtaccc ttactttgga ttgttttagt
      361 tttctaaaaa taataaatga ccctccaaat agtggttggc cagaggcata caaggcgcaa
      421 tccatagtgt atggatttgt tcaatggcat ttaaaggacc ttgattaaaa ttcagcccag
      481 gctggagtga tgaaaagact gtttactgag gactgtttga agtcgtacgt tgcgcttcag
      541 acagaccaga gggatgcaca gattgaaatg ttttaccttg cctgtctgaa tcgggctgtc
      601 aggagctgat ggcactctgc gagagaagca tcaacattct tgagcggttt gactgctgct
      661 gcttaggagt tttaattttc attgttttca ggttggtgtt tgtatgagct cagcatcaga
      721 gatcatggca ataacaacag tcttgttagc tggatctgct tttttttttt
//
LOCUS       KCKM01000711             393 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11265apa ultra-conserved element locus
            uce-6913, sequence.
ACCESSION   KCKM01000711
VERSION     KCKM01000711.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 393)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 393)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11265apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>393
                     /note="ultra-conserved element locus uce-6913"
BASE COUNT          106 a           84 c           71 g          132 t
ORIGIN      
        1 tttatgctac aggaatgctt tgtcaagata aacatatctt acaaagctgg aacattcttg
       61 aaaaagcaga ctgtaaaaca gttgttttcc agaacttcat ccttttaaaa cggttctttt
      121 atgcaggact cagctctgct aagctccctg ctacaatatc tcagcttgtt ctatttgacg
      181 gctgttcccc tgtcatcact cattttcagt gggcaagggg gagcaattgc tgggcatcaa
      241 atcatcatca agtaaaccag ccttgacact agttaaaaag ggagatggat ggtcagttgg
      301 cttctacaga aaatattctc ctaagtatcc tagcaaggtc ccttgatacc aggctagtgc
      361 ttttctttct ttcttttcca ttttttatat ttt
//
LOCUS       KCKM01000712             816 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11281apa ultra-conserved element locus
            uce-1860, sequence.
ACCESSION   KCKM01000712
VERSION     KCKM01000712.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 816)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 816)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..816
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11281apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>816
                     /note="ultra-conserved element locus uce-1860"
BASE COUNT          230 a          162 c          143 g          281 t
ORIGIN      
        1 attagaggat gtttgccata tctgctttaa cactgcagac attttaagta ggttattcca
       61 tcactttgcc attttgatta tgacaacaaa atgacaccat attgaaatgg attttggaaa
      121 gaaaggctaa ctgtccaaag aggtccatgc tcactctaat taaaattggc ttaggtggca
      181 caaccttcat aattcagact atgactatga aggatatgca tgttgaaagc gctctttgct
      241 cattagtgct atttctgtca gacactgcta cctgctcttt tcttaatgaa tgctaagcca
      301 tctctttaga agattgtgct gtttccctga actgagggaa ctgtcttatt tcctcccaag
      361 ttcgttgaga gtaaaatcgg ggagtcacct ctttgacatt tcccaacctc tgtacttatt
      421 tatctctttg agaccctgcg ctccagagat atcactgtct taattaagaa gaaggatgtg
      481 accatggtaa attgactgat tccattgatt aaggactagc tgtacaagta acattgattt
      541 taacagtggg tctacataaa tgtaattgtt cgaacatggg gctgcataat tatggtgatg
      601 tacgagaata gttggtttgt ccttttcaac cttcactaac attcttttgc atggtaatgt
      661 acctcgttca attagcagaa atcttaaatg ttacaaaatg tcttttgtga aggcacacag
      721 taatcattat agtctaattt aatctaacag catcagacag atacatctct tttcctttac
      781 ctgcttctag atttttctcc tctaaccccc tctttt
//
LOCUS       KCKM01000713            1031 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11297apa ultra-conserved element locus
            uce-7522, sequence.
ACCESSION   KCKM01000713
VERSION     KCKM01000713.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1031)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1031)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1031
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11297apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1031
                     /note="ultra-conserved element locus uce-7522"
BASE COUNT          268 a          205 c          228 g          330 t
ORIGIN      
        1 acgtgttacg ctgtaatttt tttaatgatt gtgcgttgaa aatgtttttc attttgtgca
       61 tagctggaga agatcgtcaa gagaacttca tttcattgtt cttttgttat aaataaatag
      121 ccgttcgtta cgtagccata ttttctcttg atgagtgttt gtcctgcgtg aacgcttgtt
      181 gcagttttac taatactggg aaagtctctt ctgtgctaaa tttaaagtgc ttcaacgact
      241 tctacttgca cattaagcct acatgtgcta aacgacgagt tctgtgagaa ggattgcgtt
      301 ggttttcctc cttgtcagtt gcgatatttg ttcacgaatg tgctgggaga gaaaatatgg
      361 cttccataat ttttttcttt agataaactt caaggtcttg cagcaaagtt tctttacttg
      421 atgtgctaca agtgatctag gctctttaaa atgtattgta gaattttttt tccaacatgc
      481 ttcttccctt gcaacaggta ccgttttgca gagattcgct accatcgccc tgaggagacc
      541 cacaaggggc gtacagttcc agctcatgtg gagacagtgg ttttattttt cccggatgtt
      601 tggcattgcc ttcccacccg ctcagagtgg gaaaccctct cccgaggata caagcagcag
      661 ctggtcgaga agcttcaggg tgaacgcaag gaggctgatg gagaacaggc actgaacgct
      721 aatccctttt tctatttctg cttctcacag gcacaggaac acaggcacaa aatgcacacc
      781 acacactaca caacatacat acataggagg aacataactg gtaacaatga ctggtaaacc
      841 agcttgcagc agtgtagcca atgttggttt ttatttttat ttcagctagt tcgctaactt
      901 taaatgtgtg tgccgatacc acaaacggag ttaaattgtg cttacgatgc gcagaaaact
      961 tttgatcaga gatgtagttg ctggaatctg ggaccagttg ttgagtgaga cgcagtttat
     1021 gaatagctgt c
//
LOCUS       KCKM01000714             992 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11313apa ultra-conserved element locus
            uce-3115, sequence.
ACCESSION   KCKM01000714
VERSION     KCKM01000714.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 992)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 992)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..992
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11313apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>992
                     /note="ultra-conserved element locus uce-3115"
BASE COUNT          298 a          137 c          205 g          352 t
ORIGIN      
        1 tatttgcaca acaaagtttg ttgaacttgc agattgctcc tgacaagtga atgtaagatg
       61 catgatactt tcaactcagt atattgcaaa acagtgaaaa caaatgggag agcaaaggcc
      121 catggctatg ggagcaaatt tgaagaagta gaaaaaaact ttctgataca gtgatgatca
      181 ttctaagcat ttgggtcaaa taagtgtgta aaatattaaa ggaaatgaac tggcaaatga
      241 ataaagagga gaatgtagaa gaggaaagac cgtttgaagg tggattgaga atttatcatt
      301 aagatgatga ttgctatata ctgtacactt tgatcacgcc tagtgctaga ttgctatggc
      361 atgctccttt ttccctttct atttcagcca cttattaact ctgctgtctg tgtctttcca
      421 gttcctgtgg agtggtgttg tcaattgtgt tcttgttggt agtttttttt cactattctg
      481 ctcctataac tgatctacta atttgctgtt ttgaactcag cctttgtcgg aattatgggt
      541 aacacaagat catacaaact gctagactgg aatagtttca attcaggtat tttactagtc
      601 attcggtact acatatgctg acagaaatta tggcagctca gtgaagttct tagaaatgct
      661 gtaggatctt taggttaatg cttcaaattt aaatctgttt aattatcaaa tgcctaaatg
      721 ttttgttttt atgttgttaa aggctttctt aaaattgcca aacattgttt tagtataaaa
      781 tagtgttgct cggaataact gaatatcaat ctggaatgct gaagttcagg tgattattta
      841 atagaagctt tcagctcagt gtctgtgaag taactaactt agggaaagag aataaattcc
      901 ttctgatgca gttgagatca tgtcaggtgt gaattttttt ttaaaaaaat attttttgtt
      961 ggttagtttg atggtagctg gtggtttgtt tt
//
LOCUS       KCKM01000715             986 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11329apa ultra-conserved element locus
            uce-729, sequence.
ACCESSION   KCKM01000715
VERSION     KCKM01000715.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 986)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 986)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..986
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11329apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>986
                     /note="ultra-conserved element locus uce-729"
BASE COUNT          306 a          177 c          163 g          340 t
ORIGIN      
        1 gttgctttag atttataccc acataaagag gagtcctatt tgcccattgt ttctaaaata
       61 tggtgtttct ctttcgtatc aaacttcaga ggcttatttt atattccctt acatcacatt
      121 ttatcacaga taatccaggg atattgtttc tctgagtaat aaaattgttc tttagtgcat
      181 gaccagagta agagatatgt gtcttttaga catcacgtat agacaagaag atataaatga
      241 gagttaataa ccatcaaatg tgtctatttc cttttcctat aaattaaagc atgctttcct
      301 cctgaatttt gcaagaagga aaacagactc cctcctgctg atgtggggaa gcaatgctaa
      361 atctccctaa agattcactt tggcttctta cagctgtatg ttagtacctt tttatatgca
      421 attttacttc atttagtctt taaggttgtg cctgaggtta gtttaaaagg ttagttaaat
      481 gttaatggat gttaatgctg caattaaatt gttaaatcaa ttgaaaactg tggctccatc
      541 tctatctgtg ttagtgccgg cctgagttgc attggcgtat aaattaaaag ctgtaaatct
      601 agtgaagtct aattagagac caaatttctc atttatctta ttttcacagg actgtaagca
      661 ctgatagata atcaacgaag ggctaaaact ttttaacatt aaaaaactat tttatctatt
      721 tcaggactca ggtgactgat tataattcag atccaattac tgtaaaaggt catatgtgaa
      781 atgaagttct tacagacact acaagtttta ttttacaagt ttgcatacac tgctgcaaca
      841 tctacatccc aaaaagcaaa agtaaataca ccgtacaaga ttgtgtaaag atgctcttca
      901 attagcctcc ctcatgcaac cctttgaagt ttgtgatctt agtacaccag tacatctagt
      961 ctccggtaca gcttcccagg ttatgc
//
LOCUS       KCKM01000716             886 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11345apa ultra-conserved element locus
            uce-614, sequence.
ACCESSION   KCKM01000716
VERSION     KCKM01000716.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 886)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 886)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..886
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11345apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>886
                     /note="ultra-conserved element locus uce-614"
BASE COUNT          236 a          213 c          207 g          230 t
ORIGIN      
        1 aagctaatta actggttttc actacaatcc aatccttgct tacagacggt gactctattc
       61 aacaaggcat ttaagcatgt gcttaattca tcaacctcaa cagggaataa gcaagcacat
      121 gcttaaaatt aagacaaaac acgtgctaaa atctccactg aattacccct gagtgctgtc
      181 attggggtga gatcctttga gtcctcccta caacatgagc ttgaatctct gctttccttg
      241 cagaattaac acaacaagag ctgccaggac acctttgtag ctatttgtct acagctcatc
      301 cggtccctcc tgacctgtgt cctggtgcat ctcaccattc catcacctaa ggagggcagg
      361 cctggactag aggcagcatc agcagttcat gacagatcac aaactcaggt caacaagctc
      421 tctgtctaca gaatctacag ccaagaacac acacaggatg acctgtgggc atgtgggtga
      481 gggtgtgttg gtcttggaga atcccctcac gcatcctcgt acgcaggtta cctcttgctt
      541 gtcatggtta cacttctcgc acatggcggg cgaggagtaa tgatggaaga cggagcccga
      601 taggttatcg atgatcatta actccccgtc gaaggagtcc ttaataatta aagagacact
      661 gtccagccat aagttctcct aggggacaag aaagggggga ggatgggaga gatcattttc
      721 agaatgccga gttttttgtt tcaaggtttc atgtgaattt ggggctgggt tctccaccct
      781 gactcatctg gagcagcact ttgttctgca ggtacctgca cagggtcact gtggcagcat
      841 ttgctcctta tgctgtgtag aggcgccaga gttcaatgta aaaaaa
//
LOCUS       KCKM01000717             694 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11360apa ultra-conserved element locus
            uce-6743, sequence.
ACCESSION   KCKM01000717
VERSION     KCKM01000717.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 694)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 694)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..694
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11360apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>694
                     /note="ultra-conserved element locus uce-6743"
BASE COUNT          197 a          170 c          135 g          192 t
ORIGIN      
        1 aaaatgttga ttttaagtgc ttcttgctct tgtttcatta gctggaaaga tttagtcgtt
       61 gtcctatgtg agtcagggaa aaacaacagc accagtatcc aacccactgt acagaattaa
      121 tgtcctgcaa tctttccctg ctcctgagag tcggagagtg tttccagctc cacttttcct
      181 agcagctgcc aacgttgtca gcactgatct gtcagaaagg atttttcctg gcaaaacttt
      241 gaagctcctt tctgacatcc ccaacaaact aattgttgtc tcctgcctcc gagagccctc
      301 tgaagtccca acgagttagt gtcttctcaa gagatgagaa aggggactca caaaatcaat
      361 ttatcaggct attaagcatt gtcatcagcc aaaacaaaaa cctgctaaag acaggagaaa
      421 aagtagaaga aatgggtctc tgagaaaagg ttacagaaca tccatcttct ctcctcttcc
      481 gattgtttcc tttctttacc cattttcata cccatttccc tccactaaaa gacactttat
      541 gacaagcatt gtaatctctt tagatcaggg gggaacctct tctttaggac cgaatctttg
      601 caaggcgtga gtgacagcgg gaaggggtcc aattgccacc aaagacacta ggcaataaat
      661 catccgccct ggcatcaagt gcctggacta gtcc
//
LOCUS       KCKM01000718             701 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11376apa ultra-conserved element locus
            uce-2466, sequence.
ACCESSION   KCKM01000718
VERSION     KCKM01000718.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 701)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 701)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..701
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11376apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>701
                     /note="ultra-conserved element locus uce-2466"
BASE COUNT          217 a          106 c          156 g          222 t
ORIGIN      
        1 aagtctgaag cacttggctg agactcatta gtcttgttat aaaaatggga ttggatgtgt
       61 ggtttatcat ttggaggtaa ggttctaatt tgggcacaca ggaggctgca ggcaggaaaa
      121 tatcttgttc tttattccat tttattaact ttgttttgtt cgcttgagcc tagtactgtg
      181 ttagactttg aataatcaca gctgtacagg tagctccagt ggagtgaatg agaggctttt
      241 tcaagggctc tgctccctgc agaaatgatt tgtacctctg cctgattgtc actaacagaa
      301 aatgagaaat aggaacattc aatgcaaagt aatgtgttct gtacaattac tggattaata
      361 attttattcc attactgtgt ggggagagag gacatcaggt tgaagatctg caattctagt
      421 atatttctaa gcgtcctgtt aagagagtga gcaagggtca ggaaacttaa ttatgccata
      481 actagataga aattgccaag tgataaaaag aaacatccag ccagattcag caggaaatta
      541 cagctttaat aatatagcat aatgcctact tctatacaat tattggagag accctgaatg
      601 attttaaata acaggcttgg ttttccagta acgacagggg aaaaaaaatc tgaaaatgac
      661 attttgcatt ttgccgtaaa tatttttctg aggttttggg g
//
LOCUS       KCKM01000719            1031 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11392apa ultra-conserved element locus
            uce-4986, sequence.
ACCESSION   KCKM01000719
VERSION     KCKM01000719.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1031)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1031)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1031
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11392apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1031
                     /note="ultra-conserved element locus uce-4986"
BASE COUNT          247 a          230 c          234 g          320 t
ORIGIN      
        1 cagcacttgt gtcaggctgg gaacaggcag aaatcgtgct ggcagctctg gaaacctctg
       61 ggattgcttc caggctctca gtgcaggtcc caagctggaa aggcaggagt tgtgctcagt
      121 cacccccagc tgcaagggac atattttggg gtctttcctg cagggatggg agggcttggc
      181 ccatttctta ctgctggaat gttccttcac atcccgtttt tttctctgct atctctctct
      241 taacacgacc cagcacagga gacgaaggat ttttgccatc gcctcggagc aacggcgctc
      301 ttaagtttct tccaagcctc acaccagggc cgcttctctg catgtgtggt ctcttggact
      361 gcgtagcgct cataaataaa taaggggaaa agttcttaat cttcattcga aagctcctgg
      421 tatcacaatg ctgctgcaca aaagccatct tattagcccc aagtgcaaaa tgctgccttt
      481 tcttgcagaa gctcattaat tgcaggtcac cattcaacaa gaaagatgag gcacttgagt
      541 tcttcaggct ctcattagcc acagagctga acagtatgtg tgaaattaac agtcacctga
      601 gtacctctat aatttcataa ttattaggcc taatgggtta gtctctgcca aatggtttta
      661 actccttcct agccggcgcg gggaatcgca cgagatgcca aggttggcgt atttcaggag
      721 ttttctaacc atttaacagc tttcttgtgg aaataataat aaggagagga agtttccagg
      781 atcatgtact gtttgcattt tttaacatat gtttagcttt taattattca tatacagcgc
      841 gccaaggaag cagatagcct gtatcccggc gagtgggtga aagagctttc tctgcaaagg
      901 gattttaatt ggttttaaaa tgtgttctgc gtgtgtgttt atatttgcgt gtctgtgaga
      961 gttgagcctt tcgtttctct tctccttgat gattacatta cattatttcc cgtctcttac
     1021 atttttattt a
//
LOCUS       KCKM01000720             221 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11408apa ultra-conserved element locus
            uce-694, sequence.
ACCESSION   KCKM01000720
VERSION     KCKM01000720.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 221)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 221)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11408apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>221
                     /note="ultra-conserved element locus uce-694"
BASE COUNT           75 a           31 c           43 g           72 t
ORIGIN      
        1 ctgcatatta ctctgagtat cgagaagcgg aatattacaa tattcaaatg ctaatcatat
       61 cacttagcag atgactgcag aaagtagtgt atttgaactg agacataaat tataaattgt
      121 aaacagtgca taggggatat gttataactg tgtctcattt aaattaaggc agggagtttt
      181 ctctgaagca gattatgtgc cttcattaag ttttaaagtc c
//
LOCUS       KCKM01000721             233 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11422apa ultra-conserved element locus
            uce-355, sequence.
ACCESSION   KCKM01000721
VERSION     KCKM01000721.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 233)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 233)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11422apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>233
                     /note="ultra-conserved element locus uce-355"
BASE COUNT           75 a           50 c           35 g           73 t
ORIGIN      
        1 tgcatctcca tgaagtttcc tgctgagtgc atatgaatgc actgcgatct gggaaaagga
       61 tccaaatagg atttcaaaca tccaaaaatt ttaactcaaa catttaggta tttcaccatg
      121 ctgctattca ttcattcact gatttttttt gtcttagttt aaagagatgc taaacaaaag
      181 gagaagagct ctacatgtat ttacattcca aaactaagct ccccttacca ccc
//
LOCUS       KCKM01000722             938 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11438apa ultra-conserved element locus
            uce-5923, sequence.
ACCESSION   KCKM01000722
VERSION     KCKM01000722.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 938)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 938)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..938
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11438apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>938
                     /note="ultra-conserved element locus uce-5923"
BASE COUNT          298 a          146 c          149 g          345 t
ORIGIN      
        1 ccttaaaact tgcaggaaaa tgtttaaata attcaattta tttaattgag agctaaataa
       61 ttaatatgtt cttgttgttc acctttacat gcatttgtat tactgcagca atttatagca
      121 tggaaattct actctcatct tttgtttttt ttttatctct ccttatttgg ctggattctt
      181 ttaactgaaa gacaatccct tcaacaataa attacgaaaa ctttaataaa gaagaaagct
      241 agttagatat ttaaatgcat aaatctcact tgcctgatat ccattgtgtc atcttatttg
      301 tgatatcagg tttgcctgtt tggattttca tatttccaaa cagaggagaa tgttagagtt
      361 ctaattcaaa gcatcaatca cagaaagtga acataaccta atgtcactgc tgaatcaggc
      421 catcaattta ttgctttgta aaagcaatca gcaagctatc aagcaataaa gtgtatgaga
      481 taagtgcttc ttttgagaca gcacagccat tgacaatgat atactgatgg agaatagcaa
      541 ctattttccg atgtagcatg gctgttactt gttaaaagct ctgaactgtt caacagatgt
      601 gaaatatgtt tcttattatt acggaccaat ccagattgtt taatagcctt gtatgccact
      661 tagatttgct gtcttattta atgaggttat atttgcactc tttggctctt tgttttagat
      721 gaagaaagtg tgatttcatt ttttcactca atcttctgag gaacaatgaa tacctgggca
      781 atgtttgttt catttacttg ttatggaaag ataaaattgc agaaacattc aaattctgtc
      841 actgtatcag aagaaaaaat attttacact gtactaaaaa gatgcaactg actttttcat
      901 agacatctaa aattcgtgct tttagtagtg gtattttt
//
LOCUS       KCKM01000723            1700 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11453apa ultra-conserved element locus
            uce-1250, sequence.
ACCESSION   KCKM01000723
VERSION     KCKM01000723.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1700)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1700)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1700
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11453apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1700
                     /note="ultra-conserved element locus uce-1250"
BASE COUNT          555 a          281 c          300 g          564 t
ORIGIN      
        1 tgaacttgta aagtttttct gtccagcatt catgccagat caaaccttta tcatttttgc
       61 aaaggataaa agatgaagcc ttgacatagc ttgttgtcta atgataaaac atgaaaaagt
      121 gagtgtgcta aaaactatgg ctcattgctc ttaatatagc tagtccagag atgaaaataa
      181 atgttgtctt gaatgcttgt agcatgatga aaaatcatcc tgagaatcaa aagaaagtga
      241 tgtcatatga aaaaactgtt cgaacagata agaagcaagt gcttatgcca gcatctctgt
      301 ttgttgctta ggtctctctg ctgtagtgta ttgaaaggca aatcgtggca ggatagctcc
      361 aatcaaacag ctcagagtca acttcaaact ttaagtgaca taaaattgtg acctttcact
      421 aataaggtat actaaatgaa cttagagagc tgagtgtttc tgggaggctg tggaaaatag
      481 atatgagcgg gtttagttcc tttactaaag ttctgaagtt aatccctgct atacagtata
      541 atttaatgtt ttctgcctac aacaaaaata gcagctgtcc ccctatttga aatagcattc
      601 gcatgatcac tacatattca tattcctatg catacgttat cacttaaaag gctttctaat
      661 tacaacaaca agacaaaaac ttcttggatt ctttccagac tcactaaatg ataaaataag
      721 cttgtactct ctccttctta atctccgtaa agcaccttgg agcctcatct ccgaaataca
      781 tgcgaatgaa tgtgaaaatg ccatttagag atgcaggtgt gacatttgat aagaaacttc
      841 tggattaaat atgttctgct aatgaggatc ccagctaccc ccatcagggc taactattgg
      901 ttggattgtg tgtgagctga taacattcca catgcgaaca ttcaaattca ttattaataa
      961 acagcccaag tctctatcag aaaagtctgg atcctttagc aagtgaggga tgttgcttct
     1021 cattaggaga agacatcaaa tcttccagaa tttagcaatt tcatttttgg aaccaatttc
     1081 taacagtgta ttaatggtgc attgaaaatc tgaacaaagc cttcatactt tttattcatt
     1141 ttgtaaatta cagtaatcta ggaaggtttg actaagctac tggagcaatg ggcggtaaag
     1201 acattgtact gaagcattgc agttctaatg atttttttat gattaaacgt ttatgaggaa
     1261 aaaattcatc cttggagagg aaaattaact ttcagcttgt atgttcatta tctttgatac
     1321 caaagtgaaa tgtggtttct tgttttaaaa gtttccatct ttttaaactt gcagatgtta
     1381 aaggaaatgt taaaatgaag atttattttc ttttacttta tcaactagtg ctttaaccaa
     1441 ataaaaacac atgcttttaa tttgccagtt tatagttcat attacaaatg gacagacacg
     1501 tcatggtatg atttctgtat tacaaaataa tttgcattcc ccatcagaac caaatcagga
     1561 aaatgaagta atgcatttgg gagaagtgtt atatgtgcca tgatattttg tgcatattac
     1621 tgtctcgaaa ggtattatct tttccagtga ttcatataat cactacatga gatatgtgta
     1681 tttgtgttta tctactttat
//
LOCUS       KCKM01000724            1006 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11468apa ultra-conserved element locus
            uce-2112, sequence.
ACCESSION   KCKM01000724
VERSION     KCKM01000724.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1006)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1006)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1006
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11468apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1006
                     /note="ultra-conserved element locus uce-2112"
BASE COUNT          299 a          159 c          223 g          325 t
ORIGIN      
        1 tttaaattgc atttcctggc agcatgaata tttgtgttct ggcataagca aataggcaga
       61 aacaaattag attactgaac tgtcactaaa gcagggctgt attttattag caggcagaga
      121 attttttaaa aaggtagagc atacagagga gactaaagtg aaagttacat gtgggtggtg
      181 agaggccttt ctggatgagg cctttctgat tctaagaaaa gcaatgactc aaatttaagt
      241 ttaacaaaag cattgtacta tagctaaaat gtttctttta atcttatttt agctttctgg
      301 catgtaatat ttatatatag ttgtagcagt tacactcatt gtaatggatg aatttttatt
      361 taaaagtaaa aaaagatgtt ccgtgctgta agcagcaggt gtgtttttaa tctttaatag
      421 gtcaccttcc tcagtgcaag caggcaagct gttattgatc aaagaggttt tgttgggtag
      481 ctctcagatt attgagtgac aaactttatt gaatttgact taacagaagt cagaagacag
      541 ctgaagcata agagcttgca ctaccatcag agtcatttta cgacagccag ggagcaaagc
      601 tcagagatgg atactgagct ctttgctggc ccttggagat taactgagca gccttcctac
      661 caattcccaa gcctgtcagc agaaccaatt agattttcaa ccagtagaca agaagggtgg
      721 cacttgggga cctttttgct ttaggtcgaa ggcttttcag actgcgatga gatgacattg
      781 atgatgacac gttgagcatt ggttggtttt aagacaagtt aaattagcag tcttgaaatg
      841 attccaactg tctcctgact tctcactgtt gccatattca gtggatcctg tcaggagcag
      901 gttgatgact taatagtctt tcttgagtgg atttgagcac tttggctgtg tgtttatgtg
      961 tagttgtcac gcttaaaata ttcatataaa ggtttgaaat atttat
//
LOCUS       KCKM01000725             801 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11484apa ultra-conserved element locus
            uce-6821, sequence.
ACCESSION   KCKM01000725
VERSION     KCKM01000725.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 801)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 801)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..801
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11484apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>801
                     /note="ultra-conserved element locus uce-6821"
BASE COUNT          169 a          214 c          224 g          194 t
ORIGIN      
        1 tcccaagccc acctatgcaa acagatttgt gatgtttgtg tgcctaaccg tgcatttctt
       61 ttacaggaat ctgttgctga gtgtgacatc tcttgcaagc tcccagagag aattgatgga
      121 gcatacagct agggaatagg atgccagaga agcacagagg aagaaaccag gcaatcacca
      181 ggtaaactca accttgcttt gatttatttc ctttcacctc gcctgcaaga ccttgcccgc
      241 tccagtaagg cagcaggaga gcagaaggac tgtatgcgtg tgtactaaac gcccgctcct
      301 ctccatttgc ctccgcagga tgggaaggct cagcgtccgt tggatattgg acgagatcgc
      361 ccggcaaccc ttgtggattc tccttcttct agaggggaat tatagttatg gatttattgt
      421 cccggtgcgg cacttccacc agagcagcaa cagcagcagc agctttctga ctctcttcgg
      481 tgacgggtat tcttgggtgg ataatacgga ttacgttgtt attgcttaag aatacgcgta
      541 gtcgaggaga gtaccggcgg cgggcaggca ggcaggcagc gcgaccgccc ccagcccacc
      601 agctggctcc taacctcctc tagttgccaa ggtagcgcct tttccatctt ttcctacgct
      661 ttgcaatgtt tcactctgtc tatgtctctg cccgggcggg gacgccccgt cctttgcgga
      721 agggggttgt gtgtgtgtgc gtgggagcaa gcaccgggcc ggggaaagcc ttgccaagcc
      781 tcgcaggacc gccgggggct g
//
LOCUS       KCKM01000726            1029 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11500apa ultra-conserved element locus
            uce-734, sequence.
ACCESSION   KCKM01000726
VERSION     KCKM01000726.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1029)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1029)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1029
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11500apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1029
                     /note="ultra-conserved element locus uce-734"
BASE COUNT          290 a          197 c          256 g          286 t
ORIGIN      
        1 gaggtaggag tcaccctcca acctaggagg ggcctgaaat attaactgca aatcttccac
       61 tgggactata agggatttta aaaaatgaat tacgactgaa tagaatagaa atggtgtcag
      121 ttgtgcagac tgcaaacggt gctcatgtaa cagacatttt tctagatctt attcaagcca
      181 tttatgtgaa atgtatggat actgtatgtt tagtggcatt gttaaaacag ggtgtctgta
      241 caaatattta gctgtgggaa ttataaaatc ataaggcgat taagttagct agttgtgaaa
      301 ttccaatatt gctttttaaa tgacttcagg atataggagg tgctaaggtt attatctgtt
      361 atcaggaata cagcggaatt gtacgactgg ataataacta aacaactgac acaatgtaaa
      421 attacattat cagtgtgtta aaacaaaatt gcgccctaaa ggagtctaca tgccagctca
      481 gagctgcagt gtaattatgc ttaactctga taattaaaat acaacggaga tcaacagaat
      541 cattttcatt aagaaaatta ttaatgatgg tggtataaca gtaattgatt gcagagcacc
      601 acaggataac tctgtgcagg aaaaccaaca tgttcaacgt gtgtctgggc gggttgtgtt
      661 gtgttgcgta gcaccgagca tgctgcctgg ccaggtgaca gctgcagggc acgtctcctg
      721 ctgcaaaccc caaatcagaa gatggttgat cttcaggccg ccctttggag gcagagggcc
      781 gggtgctggg gtacagggcg gcaggacggg gccaggtaca gctgctgaaa ggagccggct
      841 gccggcagcg acttgcacgc ttctcgagct gtccgtcatc tcgttccttg tgaggctgtg
      901 tttggttttg catttccatc agtgatttgc tgatgtgatt tcctcctctg cctggcctga
      961 ctgagtagtt tatgcccttc cttattgctg agaggatgcg ggagaattaa aaaacccatc
     1021 ctggcccca
//
LOCUS       KCKM01000727             899 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11516apa ultra-conserved element locus
            uce-3582, sequence.
ACCESSION   KCKM01000727
VERSION     KCKM01000727.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 899)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 899)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..899
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11516apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>899
                     /note="ultra-conserved element locus uce-3582"
BASE COUNT          272 a          173 c          187 g          267 t
ORIGIN      
        1 atccccgacc tatattgtta attcctgaat aagtgaaata tcttttcaga gaagttcgga
       61 aagctgccag cttctcgcat aaagactgaa ataggatggg cagagaaggg tgttgctgtc
      121 ggtaagagaa aaatgactga agttgcatct gtgaattttg atttcctcct ttcagacctt
      181 tgaggatgct gtcaagtcaa tggagctctg ttgtagtggt tgcttcagtg aacattcaac
      241 gctgtcggtg agtttggaat tcaagtgaaa accatcgacc gttgattgta ccctccagct
      301 aaccatcctc ctccttactt catgctttca ggccttaaca ctgaagatag caacccaatc
      361 aacacatggt gtttctcccc cactctgcca agctttacaa aaaaggtcac aatcaacatt
      421 cattgctgtc ggtgggttta actatgtgga caagctcact gaacaatgaa tgcaactgtg
      481 gccccacatt ttacagttgc cgttgagagg aacatccgct ctgaaagcac tagtgagaag
      541 caaacgcttc ttagaggcta gatttttctg gtcgaaagcg atagttgtgg atagtcactt
      601 tatgtttgct tgtttttaag tgtggttaac ttagctgact agaagaaaaa aaaatcattg
      661 cctttttctg gaatactgtc ctcacagcat tcagcaccaa tgaaactata aaaattctta
      721 ttcaatatgc gtgtggaaat aagtaacagc acagggagct ttgtgtatat ccactcttaa
      781 ggactctgag cataagagga aagaatattt aaaacttatt ttaactaagt gttgtggaag
      841 agttgaaaat tttttctata cttgtcatga caaatacaaa tgggaaacag agttcaaag
//
LOCUS       KCKM01000728             998 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11532apa ultra-conserved element locus
            uce-4978, sequence.
ACCESSION   KCKM01000728
VERSION     KCKM01000728.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 998)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 998)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..998
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11532apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>998
                     /note="ultra-conserved element locus uce-4978"
BASE COUNT          249 a          220 c          261 g          268 t
ORIGIN      
        1 ggcggcaggg gagacggcag ggcaggtccc gaccgcgcac ggcagagccc ctcggcgggg
       61 gggagcttgc tccaggtctg cccacactac gcctggctct agctgttgct aacagttcat
      121 cgcaccagcg caacaaacta atgtttaata caacttgcat gtgacttcgt attggctgtg
      181 ttgagtcaga cttttgctgt gttttaactt tccaaaacct tcaagtgcat tttgctgctt
      241 cttgaaacca cttccacacg taaaacgagc tctggcccgt gccggcaaca tttgcaggaa
      301 tgcaaatttc agaacagaag gggccaaaaa ttcgatgctc aggaggcagg gcttcctaaa
      361 ttgttctgca ggcactaatc catcctgaag tgcgtttctc gttaaagctg aactggggaa
      421 gtagcgtgtg gtgttccacc cagggggttc tgatgcattc cttttgaata aatttattgc
      481 tgggtaattt ctatgtgaca ggagtatatc aggcgacagc tagaagagga gcagcggcac
      541 ttggaaattc tacagcagca gctgctccag gagcaggcca tgttactggt aaagcactgt
      601 atctgttttg ttcagtagct ataggatcca tttatccggc cagtcctagg cttccctcag
      661 tcgggcacag ctgcgctggc agtacgacaa caaaggagct tgattaaaag gccatttatg
      721 ctagcgtcgt gggctgacag gcacatatga gaagtgctgt atggtcacac tgctttctgg
      781 gcagtaagag gaggctttat gttaaagtgg aacagttctg gtgtggtggt cgagtttttg
      841 aacagacctt ggcattcagt gaagaaccag agtgcttatg ttgcagatca aaagcacaca
      901 tgatacgtaa atccacccca ggatacaatg gcctagtgtt ggtctaaatc attgttttat
      961 ggactttaca ctggatttag tataaataac tttttttt
//
LOCUS       KCKM01000729             817 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11547apa ultra-conserved element locus
            uce-4910, sequence.
ACCESSION   KCKM01000729
VERSION     KCKM01000729.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 817)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 817)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..817
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11547apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>817
                     /note="ultra-conserved element locus uce-4910"
BASE COUNT          250 a          141 c          150 g          276 t
ORIGIN      
        1 tatcaactgc tgaattgggc agaaatgtaa tagggataag attctgcaaa tatttcgggg
       61 aaattattca gagtagtttc tgatagcaca tttctaaaga aacagaaaat acatttcttt
      121 tgatggtctg acaatgataa catgtagctc tgaatccctg catgctctat tgatatgacc
      181 cataaaaggc ccatggttcc atctcttgtt tgtattcttc attttattat cattctctct
      241 ctaaggtcag cagtactggt ctcacagaga ccattagcat gcttttgctt atttaattca
      301 ctaactgctg aagtgcacac tgcttttagt ggcactcata caactccaag cactgaaagg
      361 tttggtttca tgtacttgaa ctcaagtgac acaaatattt cagtggtgaa tcaatactgg
      421 gaaaggatgg tcagtaaggt agggagtgtt tatagaagat gtttcatcac tactagtaaa
      481 acatgtctta ttgttagttc aggaggtgct ggtatttagc tctttgaaga aggcttctga
      541 caagccaaca actttcagcc tgctagtaaa ataaaatttt aaaaattgca tgaggttaaa
      601 aatgtagttt tttgcaaaat atctgtggat taaccattta ggaattctgt tttccataaa
      661 aagaggtttc ttccattccc tcatcgtcag ggacattgac tttacagaaa agttgatcat
      721 aaagtacatt tgactatttc gtttgaccca attataaact actatttgac ctttccctac
      781 agaagtcatg ttataatttt tttaggagca cctggaa
//
LOCUS       KCKM01000730             499 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11562apa ultra-conserved element locus
            uce-4222, sequence.
ACCESSION   KCKM01000730
VERSION     KCKM01000730.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 499)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 499)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..499
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11562apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>499
                     /note="ultra-conserved element locus uce-4222"
BASE COUNT          161 a          107 c           73 g          158 t
ORIGIN      
        1 tccttggcta cattttgata cataaactga actatgtttt tagattctgg acagaaatga
       61 cattcaatct gcctattgaa ttgaacgtct tcagactgta ctgcaatgta ccatatatgt
      121 aaaagccaat aaggtcacaa taattgaatc taaataagtt tactgaaggc tacagagggc
      181 aaagaaaaac ttgttctctc tttcaacctt tgtattaatt ttccctcaat tcaattccat
      241 ctaagtctgg tgcactctag ttttacaatt caattggcat ttttaaccag aaagaacatt
      301 gcttaaaaac aacttatttg aaaaactaca aaaagtaatt ccatagagac ttgccacttg
      361 actgacacct gtcatctcat gataaatgac tccattttct gcctctcttg ccttctgcca
      421 ctccggcaat ggtcatttat catcatctct gtcagcaatg gaaagcagca ctgacagtgc
      481 aagtcagcaa acatttagc
//
LOCUS       KCKM01000731            1092 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11577apa ultra-conserved element locus
            uce-5849, sequence.
ACCESSION   KCKM01000731
VERSION     KCKM01000731.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1092)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1092)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1092
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11577apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1092
                     /note="ultra-conserved element locus uce-5849"
BASE COUNT          364 a          200 c          178 g          350 t
ORIGIN      
        1 acagaattgg ttctgtttca gcagtaggac gtgctattca aaacttggac aagtgggaat
       61 tctacacata caaacgtgac aggtatgtta atggacagaa ctaccatcac tgagaagtac
      121 tggcaataaa ggtattcctc tactggctgg cttaccttga ataacaaatt tgacttgctg
      181 tacccattcc tctgcttctt tgggagtggc agctgtaaac tattaaatgt ttattaataa
      241 ctactagtaa cgacaaaccc acaactacaa tttcattagc aataaaaaag agggacggta
      301 gcattctcgt cacttcctca agaaaccatt agtaattctt ttcatgtctt ctggtacttt
      361 tcttgcaagg atgcttctta taatgtacag ctaattttga caaatttacg taattgaagg
      421 agaggatgat ggatttgaaa ctctgatcag cagctggcag ctgtgcagaa aaaaagctgc
      481 ttctcttcat caatgtcaaa gccagaactg atgaacaaaa tttgcccttg acaattagaa
      541 gacacccatg aatttcttta gactgctggg tacagttttc ttaaaaatgt tcttgtcaga
      601 ctccaacaca ctacctgaca gcttaattaa ctggctttca actgcaatct cagatattta
      661 aaacttatta aacttacatt ccatattgat gtctagctga tagatctctg aattgcacag
      721 ctgatatgtg cctttacgga gattttcctt gcaaaaccat gaccaataca atatgtattt
      781 aacactgata tatactttaa cttttttttt taactgtgta attcatccaa ggaatcacag
      841 agacatacta tacaatagat attaaaatgc taacattgaa atgaccaaca gataaagatg
      901 atagatttcc tttttcttgt ctgaaaagat aatatttgaa cacatacata cgtatttaaa
      961 atcaaatttt ctccctaaga catgaatata caatataagc aggtgagggt ttcctttcat
     1021 taataagtca gtgaaagctg tttgactaaa atgttaattc agtaactgga attgtaacgg
     1081 ctttatcaat tt
//
LOCUS       KCKM01000732             763 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11593apa ultra-conserved element locus
            uce-5103, sequence.
ACCESSION   KCKM01000732
VERSION     KCKM01000732.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 763)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 763)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..763
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11593apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>763
                     /note="ultra-conserved element locus uce-5103"
BASE COUNT          255 a          154 c          136 g          218 t
ORIGIN      
        1 atttcgatga attccctgat cattgggagc attcaacaag ttaacagaat tccgtgcact
       61 gaagcttacc ttagaaaata agtgtacaaa tttaaaaata taaaaaagaa cagataccac
      121 ctcagaaggg cattatgccc tccgacacaa gaagtattga cacacccgta actactgcca
      181 cgcttgcagg cgctcctaag gatctgccct gtaagattac tttcaacagg attactgcac
      241 ttactgagcc cccttaacca aatgctttat gtctttgttc atatggtttt aatatggttt
      301 taaccaattg caaggttatt tataagtttg caactcccca gtagttagac ttatgaagcg
      361 ttcagactta agcatatcca gttgtgtggt aacccaacta ctgctttcat gcggtttcca
      421 actttttatt catgcacaaa ggcatgatgc atggcaggat ctgcgaactt tctgattaac
      481 tctttgtttc agcagcaaat tcacatggca gcctgcagta aaatcacaca tcaactaaaa
      541 gattttgttt taaaaaaatg gaatcccacc ttagactgat gagaagtcaa aaacaaaggg
      601 acaagcaatt aaattaacag ctggtaaatg aaaagcaaac aaaagaagtt gctactttac
      661 actctgtata atacagctgt agaattcact agaggtcaga aagagtccaa agcctgggct
      721 gtcacttgtt tttaaaagag ctggataatt ttatgactgt taa
//
LOCUS       KCKM01000733             912 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11609apa ultra-conserved element locus
            uce-2618, sequence.
ACCESSION   KCKM01000733
VERSION     KCKM01000733.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 912)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 912)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..912
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11609apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>912
                     /note="ultra-conserved element locus uce-2618"
BASE COUNT          263 a          169 c          190 g          290 t
ORIGIN      
        1 aaaaaacaga ctttgcatag gctctctcac gttgttccgc gcagcattct tttgcaaaaa
       61 gaaacaatcg gcctttccag ttatcacagt aaacaaaatt atctaaattc tctatgcgtg
      121 aagaattaag ttacatcatt ttttttacgc gtgctttggt caagggcgtt caacattttg
      181 tgctggagtt ttagcggcag ctgctgatgg gaaaagacgt cttgacagta ggtggcagtg
      241 cagctcttcc tatgtggaat ttcaggaagc ggcataaaac cggcatttac aaacttccag
      301 atgcaggcct cagggccata ttcagtcctg caattcactt ctcattgctg gggatgtctc
      361 gttaggagat taactgttta aaatgcagtg ctaatgtgaa agttttaatt gggaaatcct
      421 gtgcatgtta aattaatctt aagtactttt atctagaatg cctgcttcct ttccacagcg
      481 ctttgtattt ttaactacct tacattcttt aacatcacat taaaaaaacc tgaaatagac
      541 taacaatgct ttttacatta aagttggctg aaaatgcttt agaaagctct ttctgaagcc
      601 tcctacagag gttcctaagt gcaatgtgag ctgaatggta gcagtgctgt ggtatattga
      661 cagacattgt agctatggag agaacacggg gcaaaggttt catccaaacc acagcttatg
      721 tttcatggat aagcatgtta cgcattagga aattctgaga acaactggga tttgcagttt
      781 gaaagaaaag cagatactaa ctcagctaaa catttaggtt gagattttca aagtggctct
      841 ggggatttta gaggctggaa tctcaggctg cttataaaat ccttagtctt taggcctgtt
      901 ttcttttctt ta
//
LOCUS       KCKM01000734             488 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11625apa ultra-conserved element locus
            uce-1188, sequence.
ACCESSION   KCKM01000734
VERSION     KCKM01000734.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 488)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 488)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..488
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11625apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>488
                     /note="ultra-conserved element locus uce-1188"
BASE COUNT          160 a           66 c          116 g          146 t
ORIGIN      
        1 ccttgccaac tcattcctga caatgttaat gattcactat aaagcagctt ctgtgctatg
       61 atttgtgaca ttcaggctgg ttagatggga ggactaggca ggtttctggg gagtgttttg
      121 gatgcagaaa tgccttgaag atagcacttt attatattta ggacaagtat gacatcccac
      181 ttcaaggaaa aggcccctat acatattgag aagggatttc tatggtttaa gtggggagga
      241 gaaggttagt ttaaaagaat gcctctgtgt tttttgagac gacataaaga taggaggtag
      301 agaaatggag gcaggaggca gaaggattat ggataatgga agaattttgc ctgagggtat
      361 gtgcctgctt tgcctattcc tgtataacta gaatatttat aattcaaata cttatcttta
      421 ataattaaaa accaaggaat attaaagaca aaaggtagaa aatattatgt acacatatgt
      481 aggcatca
//
LOCUS       KCKM01000735             447 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11640apa ultra-conserved element locus
            uce-2868, sequence.
ACCESSION   KCKM01000735
VERSION     KCKM01000735.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 447)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 447)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11640apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>447
                     /note="ultra-conserved element locus uce-2868"
BASE COUNT          146 a           76 c           93 g          132 t
ORIGIN      
        1 ctatttccca actgagtaga aatataaaac atgaaacaga ttagttgatg attgctctat
       61 ttcattttga ttgggtaaga ctaaatgata ggattgaagt ccttgctacc aggagcccaa
      121 ctagtacaga agcattagga tgaaaaaaga ttttcactca ctgggtggtc tgttcgctgc
      181 caagtttttg aagtggctgc cttttatcac ttctgctgat aatcttccag ttgtagcatt
      241 ataaaggagg ccaatgagga tttctggagc cgagccatgt accaaagact gacaagagga
      301 ggtactttca ctgcaggaca cttctgacat gctcatttga gagtcacaac cctataaaac
      361 agataaaaag ttctatgtat tttatggaag gatgttacca tgaagtcaat ttttagaata
      421 atgcatagaa aattaggaaa gcaactt
//
LOCUS       KCKM01000736             570 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11655apa ultra-conserved element locus
            uce-6457, sequence.
ACCESSION   KCKM01000736
VERSION     KCKM01000736.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 570)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 570)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11655apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>570
                     /note="ultra-conserved element locus uce-6457"
BASE COUNT          214 a           97 c           88 g          171 t
ORIGIN      
        1 acagaactca tacaaggtga cggcataaaa gagggtctta aaaatgagac tgtggggcat
       61 ttaactaaac aattgcatgg agaataaaga gcttacataa aagtgtatat tatgcagatg
      121 ttagaaacct gtgtctctga gaagacacta ttttgaccat aatgcattct gtcatgtgag
      181 ataaaatgca gagaacattt acatttctcc cactcactga gcttctacca cacggcttgc
      241 atttttctca catcaataga catcttttta aacattatat tcatgtctgt ctctcttgat
      301 ggcaaataaa attcaataaa taaaatactt tatgataaat atgttagatt taagaagcag
      361 ttgtgataaa atgctcaggt tttcaaaaat gatttgttaa aaacaaataa atctaacaag
      421 acgtgtacac aagctcaaaa tatattaata tattgtagat gatgcacaat aacataatga
      481 cccaaaagaa catttgcaca gtttttcata ctgcttaact tactgctaag taagacaaat
      541 aatcaacaga tcttggaccc actgcctctg
//
LOCUS       KCKM01000737             562 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11671apa ultra-conserved element locus
            uce-5133, sequence.
ACCESSION   KCKM01000737
VERSION     KCKM01000737.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 562)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 562)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11671apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>562
                     /note="ultra-conserved element locus uce-5133"
BASE COUNT          192 a          107 c          112 g          151 t
ORIGIN      
        1 tataagacag cagcattctg tattttagta aagatatgtt ttaatagaac ggagcaataa
       61 cctgcactct tctcctgatt cctatcatcc atacattttt gtagaagcaa aaacaattta
      121 gaaccatgaa ttgattagtg aaagtaatag tacagctaca gtgctctcct ctcccacagg
      181 gaaagctttt ttccatttta aaggggaaaa attaaaaata caaaaccaag actgactgag
      241 acttgcagct cattaaagct ggggtgattt ccactataca gaattctatt gatctccata
      301 gtccacagta gacaaaaaag tgtggtcagg gaggggatga tggatgcttc tgccaatagc
      361 actgaacaaa cctgttagct aattgctacc aaagacaatt atccctgcat tgtttcataa
      421 tggaaacaca ttacaaaact ctaatataca cacagggaaa tttgatgatt tgactgcgga
      481 gccatgtgca ttgaatttca ttgccaaagg ccagccaggt cgctgctgtg agggggaaga
      541 aagtgtcaga atagaagcca ga
//
LOCUS       KCKM01000738            1208 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11687apa ultra-conserved element locus
            uce-3078, sequence.
ACCESSION   KCKM01000738
VERSION     KCKM01000738.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1208)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1208)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1208
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11687apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1208
                     /note="ultra-conserved element locus uce-3078"
BASE COUNT          403 a          224 c          193 g          388 t
ORIGIN      
        1 gacaaatatg gaagcaatat aatttatata tggaactact attgcctgct ctaatagcta
       61 cacaatatag catgaaaatg ccagtagtgt tgactacagc ccaacttcta ttgctccacc
      121 aaaaatagcc cgtgtaattc accaccaaca aattctattt ttctagccta ggcaagacca
      181 tgcctattag aaatatttga acctgatatt tgattaatgg tagcagtatt ctataagtga
      241 cttccactca acaatgtcta gctacttaat tatttcctgt ccttaatgga attaaacaat
      301 tcaaaacaaa cagctagaat ggctgtttgg tgggaaactc aaaatcatca attcatacat
      361 gtagaaattt tcctaaaatt atattaagct ggcctgttga acttgaaaac catattttat
      421 ctcaatcaat gcatagaagt aaaattatcc ataactaagg catgtttctc tgctgtacag
      481 ttcagctgta atgattctca catactgcac ttgcacatca attatgataa tcataatcac
      541 ggtcgttaag ctgaatgttc attattatca ggatgctggt gacagcagat tcaatcattg
      601 ggtgcaatgg gcaggcagtc acagtcccac ccaagtttct gcagacagcg ttgtgccaca
      661 ttaaatctat gatgtgttcc acatcccact ccattccaaa agctgtagac ggtaaaggtc
      721 aactttatgt tctgtgcaat atgcttaggt tctctaaatt aattctttgc agtactgggt
      781 gtttttatgc tttgtagata ataaaattct gtttagggcc aaaatgcctg tgcaaataac
      841 gaaacagtga tgcagttgta ctgtaattca cacataataa ggcatcagag gaaagaattg
      901 atcagcaagg agaaccttaa aatgtcactt tctgaatttt gcaaataaga aagcattaaa
      961 tactgtcatt aaagtcagtt ttccaaaatg catatgcaaa ctaattccaa tacctattaa
     1021 aggatgtaag ttatcatttc tgcatcagta aatatgaaca tatgtgaatg ttttgacaac
     1081 caaaagatta tagttcatgt atttgatccc ttgactgtcc agctacatca gaacttctaa
     1141 ttgtggatta aattcatagt gattggtaat tttttttatt cacacttctc acataaattc
     1201 tatcaatg
//
LOCUS       KCKM01000739            1074 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11701apa ultra-conserved element locus
            uce-2714, sequence.
ACCESSION   KCKM01000739
VERSION     KCKM01000739.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1074)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1074)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1074
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11701apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1074
                     /note="ultra-conserved element locus uce-2714"
BASE COUNT          344 a          187 c          188 g          355 t
ORIGIN      
        1 atacttaaaa gcaggcaatt atcttctaca aagacattcc tcttcctaaa aaaatacact
       61 tgatacactt atacttaact ccttccatgg aaaacattta atccgatttt tgttctttta
      121 acagagttta atttgattgt tcagacatgt gtctgtgtaa ctaaatgttt gctttacttt
      181 gattttagag ttctcgcttt ctgaaatatt aagtgtttaa tcactaagtg tactttcctg
      241 tttacagaaa aatgccacta aacttctact atccatctac aagcttttag caatagttga
      301 taaaactatg atataaggtg attaatggaa gacaaataaa ggagtaatta atcaaactac
      361 ataagaaagt gaaaataaaa aaatatgcag aggctgacaa gaaaagccta aacaccttgt
      421 gctttggcac caatgtaaac agaccacagg aaaaggctaa aaagttcatg aatgtgctcc
      481 agtgaatctg tgcgcgtact tcaatgctct tagtttggtt catttaaatc tgaaattctc
      541 ttccccattg atgtcagcta gttagctaag atggtgcatt actgttatga tcactgcagt
      601 gcatataatt tagatttatc tctttaggga ctcagctcca ccccctgcta gctaatatgc
      661 tcacgatgtt taatgatgca aaaaatttcc ctgagtacag gttatttatc tttatcaggg
      721 gctgcttttg gctggctgtc agttatcagc cagaatattt gttcctaaat ggtttgtact
      781 catccatatt ctagggcaat tctgaggccc atattatcac tgatgtttgc aataaaagtg
      841 tttcagttct tcacatacac cttagtaata ctgatttatg agtctggact ggctatattt
      901 ctgatacagt gatatgaacc ctgagatatc tgtcatggaa gtgaaatatc tatcaaaaac
      961 ctcagaaaca aaacccgctt gtaggggtct tgaagaaata tgaggaatga agatatttct
     1021 ttgaatacat tttgagagga gtgagtcaga ggtgagtttt tcaaactgaa gatc
//
LOCUS       KCKM01000740             542 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11717apa ultra-conserved element locus
            uce-1181, sequence.
ACCESSION   KCKM01000740
VERSION     KCKM01000740.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 542)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 542)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11717apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>542
                     /note="ultra-conserved element locus uce-1181"
BASE COUNT          177 a           87 c          136 g          142 t
ORIGIN      
        1 ctttacaagt tcctgaattt tatggctgcg ctgcaccagc ggaatgtcca ctcaatctgt
       61 tgagaagtta gcacgagcaa acatgcgccg ggcatattaa acgcggggct gaaatggcgc
      121 agtgaatatt tattagcgaa aatataggtt ctcaaaaaca ggaataaagc agggtaatgg
      181 atgaaggggg agaatagatt taacaccgaa ataaatatca aaggtgcaaa gaaaaggcga
      241 aatatagcgt tcgaaacaaa gctgcgaatt gggcccagat ttaatgcgtc ccccgggaag
      301 gaaaggttgg acagactgtt ggaattgaga tactactttt agtacacagc ccctgtaatg
      361 ctgtcagctt tatttccttt gacaaatgtg aaataaaatt tgtcaaagtt agggcttggt
      421 aagtttgcta ttgaaaattc aattggtaat aaccagtata ggctggcact caggagattt
      481 ttaaaggaaa gggatgttta agatgctgga gggagcgtac tacagattgt agctcacttt
      541 tt
//
LOCUS       KCKM01000741            1047 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11732apa ultra-conserved element locus
            uce-315, sequence.
ACCESSION   KCKM01000741
VERSION     KCKM01000741.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1047)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1047)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1047
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11732apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1047
                     /note="ultra-conserved element locus uce-315"
BASE COUNT          346 a          152 c          211 g          338 t
ORIGIN      
        1 aacactccag tgtgataatg caaatgtatg tttggcatca acactcattc catctggcct
       61 ttgaaaagta agggtaactc acagcagaag gacactatat ttgtgtgaag tgcagcagtg
      121 agtgttctaa acaatttgga aaaatctttt tagctatgtt aatatgtatg gtgatatatc
      181 ggcatatatg agcatgcaca aatatatttc aaggtggaaa tatttaatta acctgtctgt
      241 aagcataaac agcagatctg cactgaatat gttatcaatt aatttaccga aaattgtgct
      301 gctgacgatt tctatctcag catggagaag ggagtgatat tacttgcctc actgtagagc
      361 aatgagattt ctgtaagttg tgatctgcta gcatgtaata actcgatctg cttcatgcag
      421 acaaaatata ttaaaagtat ggacgagtga agtttgtgcc ccagggacaa ggcaagataa
      481 tgcattgaaa ttgttcagag gtagttagat gcctaatggt ctaatatgtg agctatgtga
      541 ggtctggggt ctggttctca taaattctgg ctagactgat cctgtaattt caagcaaagg
      601 ataaaagcgt taaccagagt catcagtgtt caaggtccat gatgctggat attattcatg
      661 taaagattca agaaaaacac taaaaggaaa gctctggagc atatgtgttt gtatgtgaca
      721 aaatacatat acataaaaat atgtgccata ttctttgtgt gtgcatgtgt gcatgtgtgt
      781 gtagacatat gtatagaaat gtgcagacag taaatgtata cattagcata tgtacagtta
      841 cacagaaatc atgctaacaa ctcaataatc gaaatgagtg ctttttgctg tgtggttttt
      901 ttttaatgtg attaacaagt taatcatgga aaggcaaaat gctagatcta ttttgataca
      961 ctagtttgca atatacgttt aatatcaaca acatttttac acttgacatc cacaattttt
     1021 tttaaaatta cttgtgttaa taagtat
//
LOCUS       KCKM01000742             804 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11748apa ultra-conserved element locus
            uce-2716, sequence.
ACCESSION   KCKM01000742
VERSION     KCKM01000742.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 804)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 804)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..804
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11748apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>804
                     /note="ultra-conserved element locus uce-2716"
BASE COUNT          254 a          133 c          162 g          255 t
ORIGIN      
        1 ttgaaaaaaa tgagtccatg gccttttttt aaaaatagct gcagtataaa ctaaccaaag
       61 ctagtttaga ggatgctatt gaaatatgaa gaaatatgaa agtatattgt gttgcttggt
      121 tatggaaatg taagtattct aactagtgtt aggacttcca agaaaatgtt cgggcaggga
      181 acttagccta tttgattttt ttcttccccc tccatgtaat ttcatcccag ctgatgacaa
      241 gaaatgggtc agactgctag ctttaccact gcaacttagt tgtatgggtt tggttttttt
      301 attattaggg aatggaacag cttttacagg gacaaagaga aatgaaatca ctttcaatga
      361 aagaaagagg cctcattata gccaccaaca gcagttattg acagctacac ttcctattaa
      421 caaggagcat ttaagagttt ggctgttgga tctttggact tgatctaatt tgctagcatt
      481 aattagtttc ttttgagcac agacacttgg tgctcacagc tatagatttg gaggactaat
      541 taggacagaa aattgaacag aatggggtaa ggcattaacc ttcaaccatt accagctggg
      601 gctctgataa agaccacaga gtccaaatgc tcctattcaa gcaaagagta ctctaatgaa
      661 tatcaatttc agccaggttg ccatattgta caagcactat cttaattttg attctcttac
      721 ctggtagaga tttttatgta tagatattaa agtgatattg gtagttcaga gctcataagt
      781 tgctacctca agaggttacc tgta
//
LOCUS       KCKM01000743             817 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11763apa ultra-conserved element locus
            uce-5961, sequence.
ACCESSION   KCKM01000743
VERSION     KCKM01000743.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 817)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 817)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..817
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11763apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>817
                     /note="ultra-conserved element locus uce-5961"
BASE COUNT          250 a          131 c          148 g          288 t
ORIGIN      
        1 gtgacaaagc agtttaccaa atccttctga tttctgtatt aatatgttgg gtcttctttt
       61 taattgaata aatatattac acagcaggac agattatatt cattgtggcc ttgctgttgc
      121 agtttgagaa cagttacaat tttctttagc tgatgaagaa agcaacatct gttcttggtt
      181 tcctgcagct ttccttcttc agaagatgca tttaaatcca caatttgaat tccttctgaa
      241 gtaatagaaa attaaaagtt tgacccctcc ttcaaagcag tggttacact gtgacaacag
      301 tgggctgagc taaattcagc tatgtcaggc aagaactata aaagtagata gattgcactc
      361 taagcttcac tttattggat attgtaattg acatatagtt gtcatttata atcatctgtc
      421 cattcctgtg agttgggagc agtaaagtta attgtggctg ctcatttgca ttagtctcac
      481 ctctgaaggg tacagtaacc cattaatatc atgtcatgat gaattatcac aaataacatt
      541 gaacatattg attaatgatc tctgagattt gtatctcgtt aaaacatttt gttagctctt
      601 taaactttta agcagacagt caatgtatgt gggagaggtt tagagatcgc ccaagaggtg
      661 atgaaaagtt atggcataca ttttggatca ctaattaaaa cttgtttaaa aggcttcata
      721 ctagttttta aaatgctttt tccttctaaa ggtgtagagc ttgcaagctt tttaatcaca
      781 agaattgtct tcattgcgta taaagatagc aatttgt
//
LOCUS       KCKM01000744             599 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11779apa ultra-conserved element locus
            uce-733, sequence.
ACCESSION   KCKM01000744
VERSION     KCKM01000744.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 599)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 599)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..599
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11779apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>599
                     /note="ultra-conserved element locus uce-733"
BASE COUNT          197 a          100 c          107 g          195 t
ORIGIN      
        1 gccagtgatc ctctggctcg gtgtcaagga aaggcaacaa aacgcttggg ctcaggccgg
       61 ggtttgtttg tgaaagttgc acggttccgt aagagttaat tttctttcca taattgttag
      121 ccataatgtg tataagacct ccaccttgat atgattccta gcagattagg gatattagat
      181 aatttccttc tatttattgt actactgcac tgtattatct ttctatcact cagataatta
      241 ctaaggaaat ctacattaat tttttttggc tagcacaagg aactgctaaa cactggcatg
      301 atgtattgat gttttacaca acaaaagttt tcctcctgtc attgtacaat aaataaaaag
      361 atatttatca aaatgcaaag cctttcatgg attttaaaga acaaagcaaa taaaatacaa
      421 gatgagcatg gaagcaaaac ctagaggctt ccttaactga acaaaattaa ggactctgaa
      481 gcctggagta ctgtacatat taaacactca cattcaagta agatgttgtt tgctaaatta
      541 tgaatgtgtg taattaaaat ctagtggctg tttctatgaa agatttacaa tgttatttc
//
LOCUS       KCKM01000745            1044 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11795apa ultra-conserved element locus
            uce-649, sequence.
ACCESSION   KCKM01000745
VERSION     KCKM01000745.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1044)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1044)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1044
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11795apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1044
                     /note="ultra-conserved element locus uce-649"
BASE COUNT          286 a          245 c          185 g          328 t
ORIGIN      
        1 cacaagatga agtgacctcc aagtggctta ctgcttttca ttaatttctc tgtataattg
       61 aacatttttc ggcatctcat ttaacaaact gttaagctcc ttattgcaca gaagggtcat
      121 gtgatgtgca gggattctga aatgcttccc ctcattcaca gttctcatac taatatcctg
      181 ggcattatta gtagttcaca aagccagcac attttctttt tgataagtgt ccctgttctg
      241 ccctcctttg tccacctcca aatgccgcct agtacttaca aagaataaag ccatgctgcc
      301 taactagcct ggtactttgg attgctaccc ctactcactc agttgcctgt aaggggatgt
      361 acttatatca atgaaagata aatcccagct agaaatacag gtccctgaca acctaatcac
      421 tgaaaccctg tcaagtaacc cctaatttta aagcgagtgg ttaattccca gcaaattgat
      481 ttatgcactg tttgaggttt ggtgagttgt gttgttcatc tgttattacc aggaactcag
      541 ctcagcctat tcatttagac cactgacaca acacagtgca tctcccaaga aaattccctt
      601 tgtcagcaca tctagaattt gctaattaaa tcaacgatga cattattcac tttctgaaaa
      661 aaagcaactt ctctctcctg cccccttaaa acacgtgtgt atataaacgt gcacacatcc
      721 aggcatagtt tttaattgtc atctgtaaat gcgttcagtc cgcacttttg aatgatctct
      781 attaaccatt ttagtcagct ccagatcaac tgctcaactc agtagatgta ttgtctatat
      841 gtctacaaac tcagtaacct ctaaggtgca tgtgcatctg tgtgtgccca cgcgtctgcc
      901 tgcacgtggt gacagtgggg gccatatgat actcgtaagc agtcgtgagt cttccttctt
      961 cagagcacac tctgaagtgt gaatttcatt aaattgacag ggttggccag aaaattcttt
     1021 tctcatctat gttgcagaag aagt
//
LOCUS       KCKM01000746            1055 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11810apa ultra-conserved element locus
            uce-2418, sequence.
ACCESSION   KCKM01000746
VERSION     KCKM01000746.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1055)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1055)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1055
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11810apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1055
                     /note="ultra-conserved element locus uce-2418"
BASE COUNT          296 a          214 c          179 g          366 t
ORIGIN      
        1 cactaagggc catattgtca gcaaatgtgt acagcttcat atatttttca agatatgctt
       61 gctacctgtg tgataagctt cattttatgc cccatattag accctcttcc agtctgggtg
      121 ttccttgttc cctggccctg gattatctca gaccaggctc ttctgccatg ctgtgatttg
      181 ctgattattg ttcttgacat ttttctgtat ggaaaaagaa gaaacttcct tgtgactgca
      241 ttttgctgtt ccaggcacat gcactgtgta gcatctttac tatctcctga tagcctttct
      301 gaggttaatc tattgtaaaa ttagattgta aaaatggaca gagttttcac atttacatgt
      361 cagcatcgaa ggactcatgg aataattcaa atactgtaca attccttttg cagaaatcac
      421 tgcaaaattc atttgtaagt gacatgtaaa ccatgcaaat tagcatggat tctccctcag
      481 ttcaattcgt gtttcagagg ttgttaccct tcccaatctg attgccttaa gaacacagat
      541 tgtcttctct tgatggtgaa actgctttaa tccccttttc caaaggtcaa ctaatctcca
      601 gtcttaagtg caatagatgc aaatacagtt ctcttgcaat gtcccttcta attgaattct
      661 ctcctaggct ttcatgtata aacctagtaa tggatcaagt ttggaagggg tcaaaaggtt
      721 tctgttccag taaaatttaa attgacatcg catactgata atggttttct ctactttact
      781 ataaacacta gctactactc tattggcata tcattttctg caacgacaca gtgattccaa
      841 acagcagcaa aacgcattct ttgttttctt gcaaaagtta gtgcctgcaa cctgcgatgc
      901 aagagaagca aaaatgaatt gcttttaatt cacagttgtt aggcagcatt tttggcctac
      961 ttgttttact ctatgatccc taatggcatt tataaagtta tgcagcttgc atacaaatat
     1021 aaaattaatg atagctagcc aaatgtgatt atttt
//
LOCUS       KCKM01000747             847 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11826apa ultra-conserved element locus
            uce-7287, sequence.
ACCESSION   KCKM01000747
VERSION     KCKM01000747.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 847)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 847)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..847
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11826apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>847
                     /note="ultra-conserved element locus uce-7287"
BASE COUNT          289 a          124 c          133 g          301 t
ORIGIN      
        1 tagatatgcc ttttattttg tggtacccta ccattaaatg ataccatcat tttttttttc
       61 tgcctaaata aattctaatt cttgtcacct actatctgta caggaagatt tgagacatta
      121 ttcctaattg agatttttac tgaatatctt ttaaagataa atttgtttta ttctttcacc
      181 cactatttaa aaggattttt cacattttta tcttctaaag gaattgtcaa tgagaaacta
      241 aaactgcgta gactatacat taaaatcact ttagttttta agctgtcatg aactgtttca
      301 aaaaatgcta agttgctatt gtttaatgtc tgtcatttta taatgcttta gaagttatct
      361 atcctgtaaa attattaact gatgctaaaa ttgccttgta agtattagga caatagcaat
      421 tttgtaacag ctgggacact gccaatgtaa gataagtaca ttttgctctg tagattcata
      481 aagtgctttg aaatggtttg taactgatgg atggatgcat tttctaagtg tagaaagcaa
      541 tattttgtag agggaaatgg cttgaaagct gacacacatg catgcaaatg ccattctctt
      601 cagtaagtaa tttgcttttt ctttcaaaag cataaatggc atagttagac acattatttt
      661 gtatattgca cataacaata caagatgcac aaaaacagca agtacaaaac atttcatatt
      721 gatagaggaa cccatggctg tagtatatga ttagcataaa tgtatacaca ctgaagaaat
      781 gccttcagga ttaaaaagta aggctgataa cgggaaaagt tcttctaact tcatgaaatg
      841 aaaatat
//
LOCUS       KCKM01000748             545 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11842apa ultra-conserved element locus
            uce-6198, sequence.
ACCESSION   KCKM01000748
VERSION     KCKM01000748.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 545)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 545)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11842apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>545
                     /note="ultra-conserved element locus uce-6198"
BASE COUNT          182 a           94 c           81 g          188 t
ORIGIN      
        1 ttctctatgc taaatacatt ttttagtctt tgttgtagac atttttgaaa taacacatca
       61 agtaccttgt taaattaact ctttcattaa taacataact ccagttagga aaaaatcttt
      121 tattcttgtg tgaatatata cataatatac agaccataaa cagtttctaa ttagtcacat
      181 gtggattcaa atgcagactc atatgccata aaccaacact gaaatgtata agaaactgtc
      241 agtcagatca aaagtcaatc caaaatcatc ccatttgcag agctgagatg ctgtcacagt
      301 tagttagcca taaatgttta aaacagcaac caaactttta ttctaattga gcatgagttg
      361 aaaggctgca cactttgatg tctttgcttt tatcatttgt atatagctaa aaacagcagg
      421 gtgttttttt ccatcttctt ctcttagaaa taggagacat tacttcttat tgaaaatata
      481 caggtaggtc aagctgtatt tgtggagcca acgtatggtt ttcaatcatg cgtgtaatca
      541 cttac
//
LOCUS       KCKM01000749             387 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11857apa ultra-conserved element locus
            uce-4051, sequence.
ACCESSION   KCKM01000749
VERSION     KCKM01000749.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 387)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 387)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11857apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>387
                     /note="ultra-conserved element locus uce-4051"
BASE COUNT          126 a           80 c          104 g           77 t
ORIGIN      
        1 aaaatggttg aatcctctag aggccagcta gggccagaaa catctatttt tccgtttttc
       61 ccagatttgg ggggcaggag ggagggcaag gggaccggag agagagcaaa gagtggttgg
      121 tttcaaatag caacattatc caaaagggtg aaagggaaca gatggccatg gagaatgcag
      181 cctcaaagcc ctaaagaaaa gggctatttt gacagatctt gctgtttcct attcaagcat
      241 gaacactctg gcatggagag ttaagacgat acaaggaaca acctctgttc ccagcaactg
      301 actatgggca actggcctct gaagctctct gagaaaaaca acatgagaca gacagacaaa
      361 cagatatggc agcgagccca gagctca
//
LOCUS       KCKM01000750            1094 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11873apa ultra-conserved element locus
            uce-2341, sequence.
ACCESSION   KCKM01000750
VERSION     KCKM01000750.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1094)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1094)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1094
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11873apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1094
                     /note="ultra-conserved element locus uce-2341"
BASE COUNT          286 a          271 c          247 g          290 t
ORIGIN      
        1 tgcagaaagt gaagctgaaa gaataggcct tggagcttga tcttgcgctt tccttatttg
       61 gatgtgtttg cttttgtttt tttcttaaag gaacaagagc actcaaggtg aaggataata
      121 atcaactaga atcagcactt tgaatgaaat tttgtttccc tgtggcatct tgaacacttt
      181 cttcttcgag ttttgcaaca gacttaaaac tttgtggcgt agcagctatg cagcttgaaa
      241 tccaagtagc actcaatttt attatttcct atttgtacaa taagcttccc agacgacgtg
      301 tcaacatttt tggtgaagag cttgaaagac ttcttaagaa gaagtatgaa gggcactggt
      361 atccagaaaa gccatacaaa ggatcagggt ttagatgtat acatataggg gagaaagtgg
      421 acccagtcat agaacaagca tccaaagaga gcggtttgga cattgatgat gttcgtggca
      481 acttgcctca ggatcttagt gtgtggattg acccgtttga ggtttcgtac caaatcggtg
      541 aaaagggacc agtgaaagtg ctttacgtgg atgataatga gaacggatgc gagttggata
      601 aggagatcaa gaacagcttt aacccggagg cccaggtgtt catgccaatt agtgacccag
      661 catcttcagt gtctagttct ccttctcctc cctttggcca ctctgctgct gtgagcccga
      721 ccttcatgcc ccgctccact cagcctttaa ccttcaccac tgccacattc gctgccacca
      781 agtttggctc gaccaaaatg aagaatagcg gccgcagcaa caaggtcgcc cgcacctctc
      841 ccaccaacct tggcttgaat gtcaatgacc tgttgaagca gaaagccctc tcctcctcca
      901 tgcactctct ctacgggctt ggcttgggcg gccagcagcc gcagcaacag cagccgcaga
      961 agacttctgc cctctctcct aacgccaagg agttcatttt ccccaacatg cagggtcaag
     1021 gtagcaccag tagcatcttt cctggtgaca gccccctcaa cctcagtcct ctccagtaca
     1081 gcaatgcctt tgat
//
LOCUS       KCKM01000751             247 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11889apa ultra-conserved element locus
            uce-7811, sequence.
ACCESSION   KCKM01000751
VERSION     KCKM01000751.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 247)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 247)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11889apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>247
                     /note="ultra-conserved element locus uce-7811"
BASE COUNT           73 a           48 c           47 g           79 t
ORIGIN      
        1 cagcagagaa attaaagctt gccagttttc ctttcacctg tccttctgac agctctgtca
       61 gtaatgatat gccttctaca tggtataatc cccatcctat ggtaaagaat aatttattaa
      121 gaaattaagg ggcttagctc ctctctgtcg ggttggtctt caaaagttgg ctgatagcag
      181 agacagcatg attatcaatg aaaaattatt taacagtacc ttggggcttt tttagacaaa
      241 gcctaat
//
LOCUS       KCKM01000752             912 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11904apa ultra-conserved element locus
            uce-7514, sequence.
ACCESSION   KCKM01000752
VERSION     KCKM01000752.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 912)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 912)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..912
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11904apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>912
                     /note="ultra-conserved element locus uce-7514"
BASE COUNT          286 a          166 c          152 g          308 t
ORIGIN      
        1 agtttatcat ccttgttttc ataatcttta cagacaccag actaaatttg tttgcatatc
       61 tattaaaggg aaaacttata ttaatttttg tgaatgcact tcttagacta cagattgctt
      121 tcattttatt ttgtcagtgt tctgtgtctc ctaatccata ttggcctact gtgtttcaaa
      181 agggaatcaa attggttttg tggtacatta atgttttatg caatattcca cagagaacat
      241 taaataaaaa taaaagaaaa aggttgacct ctaacactta cacccatttc ttatgtcaaa
      301 ccgggagatg ttgaaagccc tatatggtcg taacccttct atctaactgt gaccctcctt
      361 aacattaagc aggtgactcg attaaacata aatcaggcat aaaatgccct gcatgaggca
      421 gcacagtgaa tcaaacaaat tatcaaatgg caaaactcat tctgtgctct gggcaatgta
      481 agctgccagc acttatacat caaaacttca ctcaatgtaa gattgatttt attttatttt
      541 gtttatttta attccctaca gcaagctgtg ttagtcgtgt aaaacactgt ctgcatcatt
      601 acgttcctaa gaaatgcttt tcttgtttag caaaggctga tcacaatctt aagcaacgta
      661 atctatctaa ggctagatgt gctgcactcc atagtgggtt ccagtggagc tgatgttttg
      721 tgcagtaata ccaaaactta agcttctgtg attgtataga tttttgtctg tttgtttgtg
      781 cgtatacaca cactatcaac tttatcaaaa atatgagcac caaagggata atgttataaa
      841 attgaatcac cagtagccat tgaagatatt ttccagaaag atgctgggat taaagcatgt
      901 aagtccaatc tt
//
LOCUS       KCKM01000753             258 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11920apa ultra-conserved element locus
            uce-4063, sequence.
ACCESSION   KCKM01000753
VERSION     KCKM01000753.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 258)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 258)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11920apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>258
                     /note="ultra-conserved element locus uce-4063"
BASE COUNT           83 a           49 c           43 g           83 t
ORIGIN      
        1 attcagtaaa tacttttcta gtccaaaatc aatgccatcg attgtcatta aagcggcaag
       61 ctaaaaacaa tgaagtggtt tctaattttc aggctcctgc tggagtctgc tctaactctt
      121 cccttctcca gttaagagca tcattaaatg gtaagagcaa acagcatatt gagaggccaa
      181 gtgttttatt aattcatcat cagaattatc tcagcacatt aatattaata gcctcaaatt
      241 ggatttcatt taggaggt
//
LOCUS       KCKM01000754             667 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11949apa ultra-conserved element locus
            uce-1358, sequence.
ACCESSION   KCKM01000754
VERSION     KCKM01000754.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 667)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 667)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..667
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11949apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>667
                     /note="ultra-conserved element locus uce-1358"
BASE COUNT          243 a          127 c           95 g          202 t
ORIGIN      
        1 aaagataacc acatgtttga ggattgcaat gtgccagaca ttcactgaaa aaaaaaaccc
       61 acacaactaa acaaaactca cgcaacaaac atctgagaat ctggacactt cacatcagtg
      121 tttagaagtg tttcattaat atcttaagac aagtgtatca aaaccttggc atgttaaatt
      181 tcaagttgcc aatttttgtt ttactatcag aaagttatgg ctacactgcc aatgccgggt
      241 ctgcttaatt tgacttaaga gtttaatatg acttaaacat taaaagctca cactaccccg
      301 aaatatataa tttcacgcat acggtgacat tcaacattca agtgccagtg tttttgtact
      361 gtcttttggt caagtttctt taaactttca aagaatcact tttaggctta caaaaataaa
      421 tatttgtcaa aaatgttcaa taaatattac acaaaactag cagcaaaaag tatctagaaa
      481 tctgtcgtgt gcaaatagtt ttcttcccag ctatcattcc catggtccca aataagtttt
      541 agaatctatt tccttctcct taaacaagct gcgttcaatc tccaagagac aaaataagat
      601 tggaagttaa ggacacgcac acaagacata tataaaattc tctgaatgtg caataaaaga
      661 agtattt
//
LOCUS       KCKM01000755             454 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11965apa ultra-conserved element locus
            uce-7719, sequence.
ACCESSION   KCKM01000755
VERSION     KCKM01000755.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 454)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 454)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11965apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>454
                     /note="ultra-conserved element locus uce-7719"
BASE COUNT          122 a           70 c           88 g          174 t
ORIGIN      
        1 tcccaaagtg ttcggtttaa atgcattctt tctgattttt attttttttt aaagttctgc
       61 tgtgtttttt tctctttgtt ttctttttct aggctgaggt tcagctatgc tatctggaag
      121 cacaaagaga tgctgttgaa cagatgtcct taaagctgta cagtgagcag tacaacagta
      181 gtagcaagcg aaaggaagag tttgctgata tgtcaaaagt tcacacagtg ggaagtaatg
      241 ggtagggaac tattcttttt gttgttttat tctcactgat ctgtattttt tttaacatga
      301 tatacttttt cttacttcta gttaaccagg atttttcttc ctaggccaga aggcagggga
      361 aaactctata ttttgactct tcatatatga atgcaaaaaa taatggcttc tggaaaaatt
      421 atccagattg tgtttgttca taggactacc taac
//
LOCUS       KCKM01000756             604 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11979apa ultra-conserved element locus
            uce-3501, sequence.
ACCESSION   KCKM01000756
VERSION     KCKM01000756.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 604)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 604)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..604
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11979apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>604
                     /note="ultra-conserved element locus uce-3501"
BASE COUNT          210 a          104 c          122 g          168 t
ORIGIN      
        1 aagagtacat taaaggcatg cattttcgaa gttagtcagt tgtcaaagtg attctgaggg
       61 ttgacaatca tatttaagac aaatatagaa atctgaaaga aatgcttaca agcaactgta
      121 ttctgggcaa tggtttagtt tggaaatgca tccagttcaa gggttaaatg aaagcaaaag
      181 caatcacttc aaccatgttt ttgaagaaaa taaaacagct tgatgtaagc taaatgaagg
      241 gggtctgtga cttaaaagga atggacagat agagaaaaag gtcagaagat taaattttcc
      301 ctaagggaaa agtcattctt tggaatcatt aacctccttc taggtcacta ctgaaaaaaa
      361 cagcaggaaa tcctactgct cctagaaaga tgggtgcatc gtataccgcc cactgaccta
      421 gcaactctat ggcaaacata attgtgctta caaattctcc tccaggcgtg cttggtttta
      481 ctatgcccat tttaaagcaa tatgatcttt tagcggaact ctgaagtgta tccataaaca
      541 taatattcca ggggcttgcg acgttgaaaa gagaaatcac ttgcttaaat gtcttttcac
      601 agag
//
LOCUS       KCKM01000757             914 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 11994apa ultra-conserved element locus
            uce-274, sequence.
ACCESSION   KCKM01000757
VERSION     KCKM01000757.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 914)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 914)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..914
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11994apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>914
                     /note="ultra-conserved element locus uce-274"
BASE COUNT          256 a          175 c          209 g          274 t
ORIGIN      
        1 ctctggagac ctcacagagg tgagtgtatc aagttgcaaa gtagatggaa atactaaaat
       61 ccacaattga ccatttagac ttctctctgt ggtttcagtc tttacaggat caattttcca
      121 ttaaaaaaag tggaagaggt taaacaattt ataaaagtct agtgaagcat ttgctcttag
      181 gatagccggg cgctttctta tcctctccct gcctttcact ttctccagct tgtgtcggac
      241 ggggccaggg tttattgttt taggcttttc tgaacatgca ccagtattta cactggattg
      301 aaagcatttg cttccaatga aaatcttgtc ttagattaca gcccagcagt gtaatttccc
      361 tcccagatgg gagtaaagta gcagtatttg cctaaaaaca gtaggaagaa caaactgtgc
      421 attaagccaa ggctgttttt ggcttgagct aatgatgtaa cagaaacctt ttatttggga
      481 taggtcaccg ccagggattg aaggaggtga tctggctcgc gcttgaaagg tttctccatt
      541 gtatctacat aagtcttcac ttaaaaaatc ctgttcctaa tgcttctgct ttcatacagc
      601 agaaataaac aggaaaggtt ctggggagtg ttataggtgg aatgcagaaa gcttttcctc
      661 ccctaatgga ggatataatt caggtgcccc ggaggcatgc tttcaggaat tctcttgccc
      721 gaggtaatgg gaagctaagg ctgcttgaag gccttgatta tctattgatg cacaaagctg
      781 gaaaaaaagt catctccctt ggattatagt agatatttcc ataaattatc aatgagtcct
      841 cctcccgtca ggcacgaggc gatgcctgct aaattaatct ggagggggtt tgaaatgagg
      901 agagagtgta tttt
//
LOCUS       KCKM01000758             401 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12009apa ultra-conserved element locus
            uce-3378, sequence.
ACCESSION   KCKM01000758
VERSION     KCKM01000758.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 401)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 401)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12009apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>401
                     /note="ultra-conserved element locus uce-3378"
BASE COUNT          135 a           70 c           71 g          125 t
ORIGIN      
        1 aataccacat tttaaaactt catggaacta atttatagtg tagggcaggc gcagacttga
       61 tctcctggca gcaaaatttt atgtttccat ttcagcaata ctgcctaaca caataatatc
      121 aggccagcaa atcttaaata taagttaagc taacatgatc cattgcctta taaagcaaga
      181 gtaccctgtg gagtcatgct gaatatgtca agtgattttt caaaatttaa tcatcctaaa
      241 tgtcagataa aggtgctttt gctgtcattc tttaaaatca gggaaaaaaa cccctgagtg
      301 tgccttccag ttatacagga aactattcaa aaatagctac gttaaaatat cggtctgctg
      361 tttgctaaat gtaaggaagg tagtattagt ggtttattgc a
//
LOCUS       KCKM01000759            1092 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12025apa ultra-conserved element locus
            uce-663, sequence.
ACCESSION   KCKM01000759
VERSION     KCKM01000759.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1092)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1092)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1092
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12025apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1092
                     /note="ultra-conserved element locus uce-663"
BASE COUNT          321 a          199 c          203 g          369 t
ORIGIN      
        1 gccatttcaa ttgtggtaaa catgcagctg acgcaaactt atataggact ttttttttcc
       61 aaactccaaa gtatttattg aaggaggtct aaaacttccc cttcttcttg catgtcttag
      121 tatcacaact cactgaaaca tttaaagaac ttgagaattt tttcacacaa agtctacgtc
      181 agttccctta gttaataaaa ctaaactcaa ccgtatcgaa taggatactt gattcttctt
      241 tcacagaaaa tattttaggc attaatgaaa agttgtctta tataaaggaa ttcaattttt
      301 ttttgattga cattagactc acagacagac agaaataagc tgccattctt ccatttgata
      361 gccagacgct gccagttgtt gctagggcag tcatgctgtt aaattaggtc taatgaacga
      421 gtaattgctt taggtatagt gaaccatttc aaagaaaaca aggattctaa ttgatttgca
      481 atttgtttgg cacattgcat tgtctggggc tattgattag tcttctggat ttcacactgc
      541 atgtgtttcc ctttattaag ggaataacag gttactgatt actttccttc tgggtttaat
      601 gtagcggtta atgtctactt tgttcttgtg tcatgtcaca ggcaaggaag gaataatatg
      661 caagtgggtg gccctttgct aagaaactcc cccgctgctt tgagctgtgt actctaagac
      721 atgctgaaaa gcagatcaag agaaagggtt agaatagcag gactcacaag ttatggcctg
      781 agtcaggcta gacccaggct agaaacttgg ctttcctttg ctatcaaagc acagcacagt
      841 atgaagcagt tggtggtaga tttttcttgt ttgattatat gtctctatat aaggaaacat
      901 actatagctt catatgcctc cgtttatata cagcagcgtc ctaaatatgg aagattacgt
      961 ctttatcctt ttcctgcgag agatttactc tatagcttag atattctgga attgcacatt
     1021 ttaaatctat cttgctttgc aaaagagtaa gctcatttaa ttaacagctt tgtccctttc
     1081 ataagataac tt
//
LOCUS       KCKM01000760             917 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12041apa ultra-conserved element locus
            uce-1547, sequence.
ACCESSION   KCKM01000760
VERSION     KCKM01000760.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 917)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 917)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..917
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12041apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>917
                     /note="ultra-conserved element locus uce-1547"
BASE COUNT          285 a          201 c          136 g          295 t
ORIGIN      
        1 tgagctccaa agcgcaccca aaaccccacg acaaaggagt agcaggacgt cacggattcg
       61 gtacggcaag agccttcgaa gaagatactc tcaccctctg atatatcccc aaattaaaat
      121 agctttcagc ctccctaaac tgcctctttc cccatctgga tatacataaa tacagctatt
      181 tttatcattc agatggaata tttactattt gataggatac ttttttcccc ctacctctgg
      241 gacattccac agatgctaac caacttcccc taacaatatt taaattgcct tacaaagctt
      301 ctctaaatat ttgctatgta tttagcatgc ctaagattta ccagttatcc caaagtcttt
      361 ttgctgtaaa ttgcaatttt acaacttcat gctcgtgata tattttgaca aagctctgct
      421 gacactctct attggcctcc aaagacaaaa tagctgatac tccatgagcc accagagaac
      481 tctcaatttg ttgtgagacg ggctgctact ttgccatcct caatctgcat ggagaaagat
      541 taaacattca atttgttact tgataggcca caaggttcac cacttaccat acaaatggaa
      601 aacattactg tcattcctca acttgcttgc ctgagtattt tattatttgt aatatttact
      661 tcagggaaat tatgattcat gtcatattta tcttcatgaa aaatgagcat ctaaatggaa
      721 atcacctttt gaatgtacca ggatatagtg taatactaat atgcttcatg aactataaaa
      781 tttagtcaca gtgtatggat atattatagc atgactttaa tactctcaca tcaagcaaat
      841 tttctctgtg ttaagctgat actctgagac ctgatttcag tttgataatc attacactta
      901 catgatggta caagtca
//
LOCUS       KCKM01000761             762 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12056apa ultra-conserved element locus
            uce-2005, sequence.
ACCESSION   KCKM01000761
VERSION     KCKM01000761.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 762)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 762)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..762
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12056apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>762
                     /note="ultra-conserved element locus uce-2005"
BASE COUNT          248 a          146 c          151 g          217 t
ORIGIN      
        1 ggagaggagt ggctgaaaca aaacacaggc agtgaagata tccgcacgtg tagacgtgtg
       61 ggttagagta acagaaaaat ggctcccgtg ctccccaccc gcgcttcact ctgctcactt
      121 gaagagcagg ggaagatttg tccagatatt aggcaacctt taaaaccagc acaggtcgat
      181 tgtcacctcc atttgccaag tgctagctga taaccgtgag accttttacc tatcaaaaaa
      241 agaacaagag gtaacaataa caataaaaca gggataaaag aaatcagatc ttaaacccaa
      301 agctttttct ctcttttttc ctcactctgt ctccaagtac acctttccag ctcattactg
      361 caaatcattt gaattccagc acacaatgtc acctgcactg taatctgatt actttatgga
      421 ggaattagta tgtatattta atgtagaagg gttttaatct tgatgaaaat aatcctaagg
      481 aactgtgata gggctgctca tatgtctggc agatatgcca gtaacatgct aataaatgac
      541 agctgattta tgtatctgga ttcttttatt tataaaaata gcaagtggac tgatttttga
      601 tattaataat acaagtgaat ccactttgat tagacttctg tagagagctg tgcatattcg
      661 gcattacaat taaatcttat gatgtggaat gggaatgaca tgctaatgaa gcaagccagt
      721 gagcctgaac caagaatgtc caacatcatt atgggatatc tt
//
LOCUS       KCKM01000762            1164 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12071apa ultra-conserved element locus
            uce-4819, sequence.
ACCESSION   KCKM01000762
VERSION     KCKM01000762.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1164)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1164)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1164
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12071apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1164
                     /note="ultra-conserved element locus uce-4819"
BASE COUNT          339 a          258 c          241 g          326 t
ORIGIN      
        1 tctgtccatc ttttaagaga aaagattgaa tgtaatttga aaagaaatgt ccaaggcagc
       61 tcggctgtgt gacaaagcag aagccagata taaagcaaac agtaaaagct gaaaatgttc
      121 ctgctcttct gaagaaggtg gcaagggaag cagagtccca gagcagagtg tgggagcttt
      181 acaggttgct cggaggtcct ccgtagttga agtcacgtaa ctaatctcac cagctcttac
      241 tagtgattgt gggacaattt agcgcgtgac cttttgaaac atacataaaa tcctgtagat
      301 cgcctcctct cctgagggca tctgtagcac gaaactgaag gcagcctcac agttggcaga
      361 aactgtgtga ggctttctgt ttacatttat ttgtatacag acactggttt gtttgctgct
      421 ttttctaaat tactgccctc tgcattttct tcgttttaca tgcactgcag tcaaatcacc
      481 tttcctgata aatatggaaa cttgatgact tgaaaaaaaa aatccttcca tgtcgattct
      541 gcagttcata ttcatgctga gattgtatct aattttgaaa atcttcacac ttctgccctg
      601 ccatcatgtg taatctttta tgcatggcta cctccactgc tgctgaagca gttgctatgc
      661 gacagatgaa cctgctccat ggggccctga cattagtaaa agcaaattga ccacaggagc
      721 actaatctag catgaaaagc agttggtgcc gtgcatttcc tagagaagga ttacctaatc
      781 aacaggcaaa acctcctttt aaacgtgagc tgaattacct gcgtctggat ttccctgttt
      841 cacacctctt tgctacacca aatcatcctg aagagtgaag tctgccaagg tgcattactc
      901 agggactcac ctcagatcag attcttcagc tctcaccctg gcctgcttgc aaatttgtca
      961 tctgggctgg tagttgctgt aacttgtttc tccaaggtta ccaaaaactg gtaatgaaga
     1021 caaataaaga caaaagacgg tcagacaaca gtggatgtca cccttatcac ctcactgata
     1081 agccagatga actttaagtg tcaaaaaagg attagatgca aaagtggtca cctaatccac
     1141 atggaaaccg aggtataatg cctt
//
LOCUS       KCKM01000763             678 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12087apa ultra-conserved element locus
            uce-6753, sequence.
ACCESSION   KCKM01000763
VERSION     KCKM01000763.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 678)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 678)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..678
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12087apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>678
                     /note="ultra-conserved element locus uce-6753"
BASE COUNT          205 a          128 c          140 g          205 t
ORIGIN      
        1 atccatatgg gctggttaca ctgctccatg ttttgcctga tgttccttaa taatatttac
       61 tagcggtcct gaatcatcta taacgtacgt gtaaacagtt acgctgcagg tgtttttcag
      121 gttctaccac actgagatgt cgaggactcc ctgaattcgg tttctgattg tttacaatct
      181 cctgctgtgc ctgcaatatg cttgaattgt acttaaaaca cataaatctg ccttcaaagg
      241 cagcttggga ggcagaagtg tggctaggga attttaaata gaagggacaa gcaatggcta
      301 caaagagctc gatttttagt agtaggtgtt gcagtttgtt ccaattaccg cacacactag
      361 agtgtgaaat gttcatgcca atctagtaaa aagaaaaagt acacgcaatg ctgaaattaa
      421 cacctttgta attacataca agcttcttta ctactaccca gcaagtgcag ctgaggcagg
      481 tttggagaaa tgcaagcaca acgggttgtg caacaggaaa tgtgatttgt tttttcaacc
      541 cgaattgata attggaaact tctctggcag ccagataaaa tcatttgcat ttctgagcag
      601 aagaatttaa gagtgtacta tatctatatt cgcctaactg aaaaccagac aaaattttgc
      661 agttatatga cttgcatt
//
LOCUS       KCKM01000764            1480 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12102apa ultra-conserved element locus
            uce-564, sequence.
ACCESSION   KCKM01000764
VERSION     KCKM01000764.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1480)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1480)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1480
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12102apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1480
                     /note="ultra-conserved element locus uce-564"
BASE COUNT          420 a          320 c          259 g          481 t
ORIGIN      
        1 taaccttcaa aaccaatagg tgctgctatt tgcgtagcac tgcactagta ccaagtataa
       61 atcgtaatga tatatagctg aattaatctc gatatttaaa aacattttag ggaaaatttg
      121 tttggttagg ttgataatca gatttataag ctaatacttt atgaacggct aaaaagagac
      181 cttcgagaca attaattttg gtttgagcac caaggtcttc caatgcttac agtgacaaag
      241 gtgcttccat aagaaaacca ttcctgcctc tcacagcagt gacggaccag tacggttaca
      301 caagatggaa gtgaagggaa ggtcacgggg ctgtgtggta catttgaaaa tgccagaaat
      361 agatgctgat catcttgtat ttctttttca aaaaagactc taatcagttc taaatttctt
      421 cgacagtttg ctttcttgct gcaccttgaa atgtgccgtt tgtctattta aaaacaaaac
      481 agctcaccgc ccctcctcac tggcttttgt tggcctctct ttttttcccg tttaatgtct
      541 ctaactttat gccatgttct tttcctcttt cagcacggct gagcaaggct gacaggcgga
      601 ttcctttgct tttcagggta ttaaagccac tttcccgctc tgacagcctg ttctactctg
      661 ccaccttata gctctggctt cacacttctc tgggcagcca ctgcttcttg acagaccact
      721 gtcacttccc atcatcctct ctgtatatcc tgttctctcc ccctcagcac gcatcccgac
      781 tttccaacca atgcaattat tttttttgac aagccatcca tcagctttaa ctttaaaagc
      841 actttccgct gatatccatt gttaaatccc ttgcttttta tggagcttgc atgagagaat
      901 atgatatcag acattcaaac tactaaacca tgtaaattta ctttgttctc agctatgttt
      961 ccaatttcac gtccaatttt tcggtacatt atgcgtagtt gttgtgctta atatgatgtt
     1021 gtcaaatccc attaaagttc actgcattgc acggctttaa aaacaggtta caatttgcat
     1081 tctataaaga aaggaaggag tgcagtctga agtcaagctg aatcttatta aaattatctg
     1141 ttcaattgtt acatttgtag atggagtaat tttgaggcat tagctgagac acatatgaaa
     1201 atgtcagtgt gccaactaat gacaacgaaa gcaaaaggaa tatatctgtg aaactcaata
     1261 aagctccttt gctggtgaca taaatttgat gataatccga ggaaatgaat aagggaccat
     1321 ccagtttgaa taggaattac cttttctatt aaatcacttt gctgtatttc cacttggcct
     1381 acatcttggt cctatgccac aatgagtctc tctcggcgga ctaaagaaat ccctacagga
     1441 gtaacattct cttgaggaat atctttcaca taagcctcat
//
LOCUS       KCKM01000765             949 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12117apa ultra-conserved element locus
            uce-3073, sequence.
ACCESSION   KCKM01000765
VERSION     KCKM01000765.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 949)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 949)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..949
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12117apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>949
                     /note="ultra-conserved element locus uce-3073"
BASE COUNT          323 a          200 c          162 g          264 t
ORIGIN      
        1 gacaacttgc acaccaactt actaaaaaaa agaaaaatag aaatgttttc caaacaaacc
       61 cttccatcat ttcaaccttc ctccttcagg gaaacacatt ccacctagaa acacatccca
      121 gaactttgct atgaacagcc actcagtttc tgtaccagca gaaacaaaat gttccatcca
      181 aaacagaatc tcatttatag acacacagat agataaattt gaaatttaaa ttgtatttaa
      241 ccacttggat gtttcatatg ccccaaaata acgatggttt taaaaaaatt tttcaattaa
      301 ttgggaagta tgaccagctg caaacagcaa agacggaagt gaaacactac ggtttaatgg
      361 ggtgttctat ctagtgcggg ttaataattc ttcttttccc tgttttggtt aaatgaacat
      421 tctcttacca tttgtctggt ttgtccgtgg ttaggcagac ctaacaaaca ggaaagagaa
      481 tagagctggt aagaccattg cttttccaag acagaaaaaa gtacaaaatc aaaacacacg
      541 cagctatgat tgcgaccgtg ttgttttgct aaaacaggag ttgactacca aactaacttt
      601 gcccctccta gaaagggaac tgaggaaaga aagagctgtc ttaacaacat ggtttgaaga
      661 gcagaggccc caagttaaaa acacgttcca tttgcccagt cttttctcca tttattcaca
      721 cctttcttca aactactgct aaaagtacag ctcctccttc agatctgagg ttttcctcaa
      781 atcttgggga aaaaaattaa aaactggcat tctgttttag ttttggaaga atttactgac
      841 atcgagaagg agaaagtgga aggtattata cattgtcaag atagcaacaa ataaaatcgt
      901 tcctattgtc ctcggatccc ctcagctctg acgtcagcta caagctgtc
//
LOCUS       KCKM01000766             909 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12132apa ultra-conserved element locus
            uce-6113, sequence.
ACCESSION   KCKM01000766
VERSION     KCKM01000766.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 909)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 909)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..909
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12132apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>909
                     /note="ultra-conserved element locus uce-6113"
BASE COUNT          304 a          197 c          156 g          252 t
ORIGIN      
        1 aaataaatac ctcaagaaga tgaaatcaaa agctctgaaa aaaatcaaca gtgtttactt
       61 caagaaagta taggatcata catttttaga gcacagatgg aaaacaccaa ctcgaatatg
      121 ttttgaaaca caaattccac actacccttt ctaaaagaag ctgtttgtag aagcacggtt
      181 tacattaacc ggtacctaac aattttatat gcaatctttc taaaattcat ttgcataacg
      241 ataatccgca tatggccggg tttaagttat ttaagcagtg ttatatttca ctatttagtc
      301 ttgcttcacc actgctttag cagtgaatcc ttatggagtg taatgcagct aatgaggtag
      361 ctttttaact gaacaaactg acaggtccca tatctgcaga ggcagcttga aaccgtgccc
      421 aacctctcgg cttcccaaga ggcttttcaa aattcaataa ataacatctg taggcgatgt
      481 tgggtgcaga cctagcagag tgcgtcataa cactgagctg gcagaacaaa gaaaccatga
      541 cgactgccaa gtttccatgg taaccgctgc gaggcttgga gagtataata gcacatcaat
      601 cattgtccaa aagaacttca ttatcagcaa gcctttagga tctgtttagt gtgcaattgt
      661 gggttaactc acctcaaagc cttgctctct agcaaaagtg gcagcttcct gaaataataa
      721 aaaaagagca gttaattata aagtgctaga taatgaagaa ataacacatt ctgaaactca
      781 ttcagccggt tttcctttta cacgattatc tcaatatacc catatacagt tgttcaattc
      841 tgatagctgc accaaaagct tccccctccc tccttcaagc ccaacaacag cacaatgtca
      901 acacatttc
//
LOCUS       KCKM01000767            1140 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12147apa ultra-conserved element locus
            uce-129, sequence.
ACCESSION   KCKM01000767
VERSION     KCKM01000767.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1140)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1140)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1140
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12147apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1140
                     /note="ultra-conserved element locus uce-129"
BASE COUNT          364 a          194 c          199 g          383 t
ORIGIN      
        1 aaaggaaaga aaaaggtgta aataaattta tgcatagggc ttgcagttta ggaatgcctt
       61 ctctctcatt tattgtatgg tatatccata actatcagtt agcattgccc acttttgcat
      121 ctactggaaa tgttgggctt tcactgtgaa aaggctgatg cctatgaaca tgtgagatac
      181 ctttatgtgc cacttctttg caaacagaga tttgagaaca ctctcattaa tgtactataa
      241 aggaaaggga ttttttagaa taacatctct cctaagaaat gacatttaaa aggagcattg
      301 attgatatca gaaacaagtc aaaagagtta aagaagtttt aagtattacc cttttcagca
      361 tggctatcaa taggaagctg acaatagtat tattgctatt tacatattgg taacacgctg
      421 gtatgaattt gcataacgta ttgtggttct atgctctagg gagttgcatt gtaacatatt
      481 ggtgcttaat gaactctgaa aaaattgatt ttccacagag taaattaagg aatgcattat
      541 agctgttaaa gcaatcttaa gggaaatctg aggcttccac tgcagcacca tgcttagtaa
      601 gtaataaatt acatgttata cttatttgcc ttaattcatg ctaattttgt ccaattaatg
      661 tatcacagta attcagaagc ctgtcacagg agagctaatt atttattgga tttttgtgtt
      721 cagctcccta ggagtctact agcaaacaaa cttgcgactg tctttctgtt aggtccacaa
      781 tgacattttt atgtcttact gtggaaagaa aaagaatgtt attatttttt ggtctcagtt
      841 ataaaaatgg atcattattc aagtacgtta gttttctgtt tacaaactga tgtcacatcg
      901 tgacagactg ccatactgtt aggatgagat ccaatgtttt tcctcttcct ataaatgtct
      961 gaacatgaca taattcctat taaagaccat ggcactactt ctcataacct gaaagcttct
     1021 gccatttctg tgtaaagttc aaggaaaaaa tcattctttt cactgaaaac tctgtttttc
     1081 aaaacccatt ggcttgaaaa atcaagcaca atgtgcccat agcaattgat actccttcac
//
LOCUS       KCKM01000768            1017 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12162apa ultra-conserved element locus
            uce-3792, sequence.
ACCESSION   KCKM01000768
VERSION     KCKM01000768.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1017)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1017)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1017
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12162apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1017
                     /note="ultra-conserved element locus uce-3792"
BASE COUNT          304 a          178 c          201 g          334 t
ORIGIN      
        1 tttttaaagc agaagacaat caagaataga tttaatataa cagttctttc tttttattct
       61 gactaactga aacctttaat tctattttaa atgtgtttcg gtaatctgtg ttatgtattt
      121 gtgatgtcat gttaggtcac ttggctctag aaaagaagta ataagaaata tagcagaaat
      181 ttaaagggga acaaacttac cattgtggtt tgtatttctt ctgtttacta ttttaatggg
      241 tttctttttt ctcccctctt gtcttgtctg tatctgctgt caaataaagg ccaagaaaca
      301 ccaggtcttt ctaacagaga cgtatgaaaa caacatgaga gagctggagt tactcttgga
      361 cagctttgct atgtcaggcc agcggacagc aggttagttg aaggtataaa atgacagatg
      421 catctgtcaa tgttccaaag tcactacatt gtgggaattc tgcagatgcc tcttgcattc
      481 cctcttctca acatgctttg atttgatgac atgataagag cagttctcac agcagtcaaa
      541 tggccttgct agctgagaaa gggtgacgga atgtggacct gctgttgtca gcccagagct
      601 tgatttacaa atgctggggt gtatatgatc ggtcagaaaa gggctcactt gctgtgctct
      661 aaatccaact gagaaaaaag tccttacagt atacctgcaa agggaacaga tgttttgcct
      721 gaactgagcc aaattctgag gcaaccttca gcaacttaaa ggtcatgtat tcaaaaaggt
      781 tgtgtaggac acctgatata acacaatgct ttttattgtt gattgtggac tagtactata
      841 ttgcattcat ttgatctagt acagaacaaa tatttctctc ttttcattaa aattaattgt
      901 aagtcagtgg ctgtcactct gctacttagt tttatttgta acgattgaat caaactcaac
      961 aaactgctgc ctgcttaaac atttgaaata gtggctatca aacaggctga attttaa
//
LOCUS       KCKM01000769             945 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12177apa ultra-conserved element locus
            uce-4550, sequence.
ACCESSION   KCKM01000769
VERSION     KCKM01000769.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 945)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 945)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..945
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12177apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>945
                     /note="ultra-conserved element locus uce-4550"
BASE COUNT          303 a          185 c          170 g          287 t
ORIGIN      
        1 taatgagcat cgctgggatg tgagattaat cccacctgtg aaaaacacct ccataactca
       61 ttcgtgacta cggcagtctt gaattatgag atttgcagtt cactcgtggg ataaattgca
      121 gactcctcag ataaccatta tgtatctgta tcattcacag ctttggctaa cagcaagagg
      181 ctgtgctttc ctattgcttt atccgagtgt gctcttcaaa catttattgt acgatggtta
      241 ttgcagggga taaataatgc atacgaggga acaaaattta cattataagt tgattaaact
      301 gcttaacagt tttcagccac tctctaaata aggattttta accagattta atctatgcag
      361 tgtttcatgt ccaaagagct agcatttaat ctctgtttaa ctgaaattta gttagcaatg
      421 ttgacacctc tgcattttaa cactgggatt tctttgtggg acacaatccc tttcactcaa
      481 cttaatatcc catcttggtc tctaagggaa aataattgag tttaggctag ttttaaatag
      541 cgataaggac agggaacaca gatgggtatt tcattgatta acactaacac tggcctaagg
      601 ccttggtgtc aggcattaga ttaggacatt acgaagagaa tgacagagtt ttggcacttt
      661 attcctcctc aataacattc tttcacatat taagtttatc ccaccctagg tagctacttt
      721 atcatgcaga aggccttaat ccactgatgt gactctatct gctttcactt tgatgctgcc
      781 tctgtttaca agagtaatgc agcctgtgta agacaaagta ctcgtgacaa gaacaactga
      841 ataaggcttt tagatgcaca gagctctgac ctaaaaaaag aataaaaaag ccttcaataa
      901 acttcaaaat actccaaacc aaaagagaag agaaaaaaat caaca
//
LOCUS       KCKM01000770             941 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12193apa ultra-conserved element locus
            uce-7958, sequence.
ACCESSION   KCKM01000770
VERSION     KCKM01000770.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 941)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 941)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..941
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12193apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>941
                     /note="ultra-conserved element locus uce-7958"
BASE COUNT          304 a          179 c          165 g          293 t
ORIGIN      
        1 gtcgaagtcc atgttttggt attgtttaga ttataaaatt agtctgtgga attcagatca
       61 tccttttctc tctttctatt aaaatatatg cttaaaacag attggccatt gaatcacagc
      121 agtgatattc tttaatgcta atttttaaca ataaaagaaa cactatcctc ccacacacaa
      181 atagccataa ttatgtaaag aatgactgct tcagactgat gactttcaat atgcttgagt
      241 ctagcacact ggtataagag gccagaaagg tcaacagtaa ttcataactg ctataaaatt
      301 gtgtagcatc ctagggcttc tggaggatgc tgacattatc atgcttcttc tgctggtttg
      361 tatatgtaaa tttgtgatag gaagtgcact gctttgccgt atcgcatgca gagcatcaat
      421 caggcagtag aatacatcag agtattttca ttatgcctag ttatttactg catcagaaga
      481 aattaccctg gcaagccaag cggccttctc tggatagcat gatatgacca accaggtttc
      541 agctcaggag tcttgtaaac attacaggat taatctcaca atcgcaatca tcaatctttc
      601 ctagtcctgc ctgggtgcaa ctgcggagat tggtaaccag gcaatgtaga tttaaattta
      661 accctgaaca tcaagagcta tatgtcagat ctgtgcacca tattccaaac acctatattt
      721 ttactccagc tttagtacaa aatgatgaaa acataaaatt tttgcacttc aaattcatgc
      781 ctaatttttc attcccattt ttgatacatt acagggaaat gaagaatatt ctgaaaaaga
      841 cacattttat aataccgaac tctaacgcta aaatgatgca ctgtgatgcc gagatctaat
      901 gtatgtatta gagacaactg acgctacagt aaaatgtgga g
//
LOCUS       KCKM01000771            1024 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12209apa ultra-conserved element locus
            uce-1354, sequence.
ACCESSION   KCKM01000771
VERSION     KCKM01000771.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1024)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1024)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1024
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12209apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1024
                     /note="ultra-conserved element locus uce-1354"
BASE COUNT          244 a          207 c          256 g          317 t
ORIGIN      
        1 gtgacctttt attatctctg tggccttgca gtgtcatgca gtgtcataaa gctgtgggaa
       61 agtcttgcct ctagtgttat cagctgttgg aaattaactt aaaaaaatga aatatctatg
      121 tttccttttg cctgaaggtg tctaggagtc tgtaaactgc tacaaaggtg caattatcgt
      181 ggttatgatt ttgctgcggc tgagcattgc ttgtgcatct tttcctcttc tctctccccc
      241 cttctcttct ccctgctttt tagtgcaagc tgtgggctgg gcaatcaggt gttgtgctgg
      301 gggagggggt tactttagga ggggggttac atggcataat tcccacgaat gtaggaggag
      361 gatgaaaaag ataaagaaat tttgtttttc tgagctagag gattctctgc atgacttccc
      421 cactgatggg atcatgtgct ttcaggctga gattttatta acaattcaaa tggaaattga
      481 gggcacagga ggagcagatt ctcacataaa cttgatctgt ccatgaatgc agttctctgt
      541 ttgccctgac cctgcatggc ttaagacact gcctgtgagg cctgagtgcc agacacaaag
      601 accgaaatga aaagcaagca cattccagta gtctgcacaa aggcaatgga gcagttgcta
      661 gccgtctccc cagggagaga tcttatctcc ttgcggctaa aaccctttag agtgtttatt
      721 tgtactctag cacccgaggt ttatgaattg atatggatgc tgattaaatg ctctaagctt
      781 cctccgtgag tctttttggg agatgtggag gtgttctgcc tgtactttct ttcccaaata
      841 attaccggcg taaggttgct tcggtttttt gatgggccag cgctgatgag tgtcgaggga
      901 gaaggcgctt cagaaagtgc attcgttaat aaaagtaatc gccagcctta ggagaatttt
      961 gcaaaacttt gtctgtagga cgcttcgccc attttttacg tttcaaacag cgcaggctgt
     1021 cgcc
//
LOCUS       KCKM01000772             614 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12224apa ultra-conserved element locus
            uce-5739, sequence.
ACCESSION   KCKM01000772
VERSION     KCKM01000772.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 614)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 614)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..614
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12224apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>614
                     /note="ultra-conserved element locus uce-5739"
BASE COUNT          201 a          110 c          119 g          184 t
ORIGIN      
        1 aaatttaaat gtaccttaaa tgtgctatag tgccttggta taggaaaaaa acagatggag
       61 ctttctccag tcaaatctca gcttgaaaga cacacgcctt gtagagctga agcgtagttg
      121 gtggtgcact tcatgtcctt catgtaaaat atcctgtcac ttttaatttt gtatcttgtt
      181 tactttctct gttacaaaag aactgggact tgtttttagc agctctgatt aagtttctat
      241 tgatttttga gataggaaat ggaactttca gatttcccac atgaatttaa agcaagtcag
      301 atattaacct cgaggtaaaa catctgccat gacattcaaa gaatagacaa gtactatctc
      361 actgaaaaca gcatctgtgc tcaaaacgca gggcttggga tttggagaac aatgcaagca
      421 gtaggactgt atttccacgt gtgtaaaatc acacataaat acatcgacaa ttactcagat
      481 ttaatgcgtt attgcacata tgtgaaaatg ccctttaaat actcacattt aacttctaca
      541 gcactaatga ctcaagtgag atagggatgg tgccaagcgg aattaagaat actgtgaaag
      601 ccaatgcagg gatg
//
LOCUS       KCKM01000773             737 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12240apa ultra-conserved element locus
            uce-2795, sequence.
ACCESSION   KCKM01000773
VERSION     KCKM01000773.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 737)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 737)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..737
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12240apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>737
                     /note="ultra-conserved element locus uce-2795"
BASE COUNT          232 a          160 c          143 g          202 t
ORIGIN      
        1 agcactaaac agaggcgact tcctccccta gcacagactt gataatgaag ccactgaatt
       61 tacttgtatt ataaatatat atttgtccag agagtctttt gcagaagaag tccaaagcaa
      121 ggagttcatt tggaggaaaa aagaaataac agcagcaaaa acaacacaaa gcgggggaaa
      181 atgtagaatc acaaagaaaa cctaaacaaa taaagtgcaa acagagagtg acaagcgcac
      241 tcagcccctg gattggttat ggatgagacg acaagtatat gatgaaatta atgaccctct
      301 gtcaactttt tagatctcac ttttaaagag aatggaccaa aaatcaatag cccccaaacc
      361 actagtactc cagtgaacca gtttatcatt tatcttactg ctggcactca tatagaaagt
      421 gcagccaagc acagcgtagg actttcattg gtagtcatca ttactttgag cactccagtt
      481 aaaggtcaaa ggtgtgcagt acagctcctc tgagaagtac ctatttgaaa ttaccaatat
      541 ctgtgtatgg cttatccatg ctgtacgcta ctggttttat ttttttttcc ccccgtgtgc
      601 atttcccctt tctgagcttt acctgctggc caaaaccaaa gcagtgctgg ctgtgcacgc
      661 agggtttagt ctaagcagat atttccattt tccgttctga ttctcagaac actgcgtctc
      721 cgttatttct tgaggca
//
LOCUS       KCKM01000774             901 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12256apa ultra-conserved element locus
            uce-2781, sequence.
ACCESSION   KCKM01000774
VERSION     KCKM01000774.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 901)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 901)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..901
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12256apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>901
                     /note="ultra-conserved element locus uce-2781"
BASE COUNT          251 a          194 c          199 g          257 t
ORIGIN      
        1 acatattagt tacaagaaca ggaactttaa cttttgtgac acaaagcact tacgactggc
       61 gaagttttgt tttgcatagc ggaagcctta tgggaatatc gcatctttcc cgagacacac
      121 aagggcttag cagtctcttt tagctaccta tgtgcccccg cagaagccct gctagcaatg
      181 aaatactctg gtggcaaaca gctaattcat taattaacca cagtatttgc tggaaaggaa
      241 agcactaaac aacgcagcac agaaagtgca attgtggttg ttccaggtcc ccgtctgcag
      301 tatgtgcggc agaggcaagc aatgcctatg ctgtttctaa ttattccaat tatcatggca
      361 cactatgaaa acttgattaa taacactgaa gatattgttg tggcaattag ccatatggtt
      421 gtgggacttt attctgtcac gatttagcca ttagcatcta cttatgtttg tcagaacaga
      481 gcatccgtga caagttggag ttccgctcac cttgccgagt ccccaatgag caacaccaga
      541 gaaatgttta ttcctgggag cccgtgcctg agtaaatttt tcatgtggca tccggtctga
      601 ctggggacaa atgtcaagca gcttatgcga cgacccatca agcccagctc ttgcggcaaa
      661 gggtacctcg tgaatggctt gtcaaggcag acttctttca gggaaggatt tgaccagtaa
      721 aattagtgtc aaatgtcttg tattcaatgt tttcaatggt taactgttca gacagcatgc
      781 acctaccctt atttagatgt gatgaaatgc tctattatga ttttatacac ctatgagtta
      841 catattaccg tgtgcttgaa atgtatatct ccgagcagag ggaccgtggg gcagcactac
      901 t
//
LOCUS       KCKM01000775            1112 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12272apa ultra-conserved element locus
            uce-1573, sequence.
ACCESSION   KCKM01000775
VERSION     KCKM01000775.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1112)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1112)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1112
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12272apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1112
                     /note="ultra-conserved element locus uce-1573"
BASE COUNT          362 a          194 c          200 g          356 t
ORIGIN      
        1 ttttgagcag cattaaaatc agtcttccct gattttctgt tttccccttc ttttcaaagc
       61 acatacatta aactcatttt atgcttataa tgtatataat gattctagac aacataagaa
      121 ggacactggg attcttctta tttcaacata taaagtggca agccaattta tgcagcttaa
      181 accattgcta aagaagatgt atcaaaaatt gcctgtgatc attacaaata atagcctgaa
      241 atgttcacaa gaagctgttt gcttatcata ttttcattaa aacatctttt cacctggttt
      301 gcttttccca tgcctgtaac ctgcattgta atcagtctta ttaactgaga acataaatat
      361 gatttataat ggtctgataa tggaagctgc atggaccaaa agaagggata tattgtcctt
      421 tgataaaatg gctcttttct ctcaaataga gctctatcat gagagcatgc agaatgtagt
      481 gagtgattat ttcctgaggg tgaatgatgg cagaacccta cagaaaatct tgttggccat
      541 gacagtctcc gagtgtaccc aaatctcact gagtttgaca acctgcagac acttttgatg
      601 aactgtattc ttctgtcaga gacagcctgt ctgggaggag aaaagggaac ctttatcgtc
      661 tgatctgcta ttattgtctt gatcttttat aagcaatctc taatgcacgt gaatataata
      721 tcctttcaca caagtgccaa acataataga aatgtagtta aaggaccctt ttcccagtta
      781 tgtaaatgtc ctaataccat aattagaaaa gatggtttgt gaatgatagc agtagggaaa
      841 gggtaatcaa aatgttttaa cgttatcttt ctgttttaaa gaccaaaacc tgtgataaat
      901 agcatttatg gtagatacag ggaatcagtt cgttctgaag cttttaccta gaagaaaata
      961 gttttgagca taaaactggt gttatatttc cataaaccac ataaacggca gctggtgtta
     1021 agccaggaat gattactggc agatacgact tcaagaaaat gagtattcca ctcaaaattc
     1081 ctccatggct gttatagaaa gaacaaagtg tt
//
LOCUS       KCKM01000776             866 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12286apa ultra-conserved element locus
            uce-2049, sequence.
ACCESSION   KCKM01000776
VERSION     KCKM01000776.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 866)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 866)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..866
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12286apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>866
                     /note="ultra-conserved element locus uce-2049"
BASE COUNT          212 a          146 c          168 g          340 t
ORIGIN      
        1 agtggaactt tttatactgg agattaaaaa acaaatggaa atttttgtgg cttactctcg
       61 tgggccccct cgatcatgac tgattttcga gtttgatttc tggacgatag aaagagagtt
      121 ggttttgttt agagaattca aaactttggc ttgatttctt tttttccctt tgcttatatc
      181 tagtgtttag aattttgtct taacaaaagc ggtaagtttc actttttatt ctgtatcgtg
      241 cagttacaca ataaggtaat tagaattagg agtactcggt cactttgcgt ggataaatgt
      301 attagttaaa acgttagggg tttgcttttt tgctgtttag atcagagttt tttctgattc
      361 ttctgtcctc attgtgaaca taaccgtgta gttgaaacag tcagacttat ttttgtaacg
      421 tatgttattg tgtgatgcag ttttttgctt ctgtctccaa tattaaacca ttttcctaat
      481 actcgtctct ctactttgtg tgttgtattg ttggtggtca ttctgtgttg gtaatacatc
      541 tacacacctc actgtttcac gtgcctgttt tttattttct ctatttgttg gttgtgtaca
      601 aaagatacag tcgattccac ctaagtgaat atctgattgg ggggcaaaag aggatttgta
      661 cactttagac atcttatggt ttctttgatt tttacttttt tttctctctt cctcccccta
      721 gtcatgcctt atcacttgga taatctgttt gagcaggagg aattttaaat gagtctcctg
      781 caaagtcatg tggaaggtag cttttgttag cctgctaact gcaaaagctt ctgcacacaa
      841 acacacagaa gccacctgaa aagatt
//
LOCUS       KCKM01000777             928 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12300apa ultra-conserved element locus
            uce-72, sequence.
ACCESSION   KCKM01000777
VERSION     KCKM01000777.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 928)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 928)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..928
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12300apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>928
                     /note="ultra-conserved element locus uce-72"
BASE COUNT          275 a          206 c          195 g          252 t
ORIGIN      
        1 tatcaagtgg gggagcaaac acccttttct aggtcatgct ttaaacaagc aggagaaagg
       61 ttttttggta ctctgctttg aaacacggca atgtttgagc aggtctctgc ctgagcaggg
      121 gttcaggtag cacctgttcc cctgtgccct gctttccatg ctgcgtgagt gaccctgacc
      181 caggccaatg tcagctcccc ttgcctccct ccctcctgtg ttctctgtgc tcgaggtgtg
      241 gagcaatgga gcaggggagg gattttgaga gttggttttg ctctgaggga ggctcccaga
      301 aaatatgcct caatggtttc ttaaccttcc gacttgccct tctcgctaga ttatggcaga
      361 aaaatggaac tgaaaaggag agggggaaag aatgcaaata ctggcacaca aggaaatact
      421 gaattacata ttggtcgacc aaaacacaaa tcaactcaaa actacaggag tccaccaaca
      481 tgcacataaa tcatttataa cgataatcca aggctaggtc caaatctcat taaagtatat
      541 gaatccttaa tctattttgg caaaaaagag ccaatacaca ttttttcttt ttatcataaa
      601 ttacagttct gtggcactgt gcaaatatta ccaagctgta agacagctgt gctccattaa
      661 aatgtgtaat ggtcgctgat ttcttacagc acatggtcat caggctgaat ctacagccag
      721 taattaggaa gatgaaatgt ttaattgtgc cttaattttg ataaaattta tctgtcacac
      781 atcccgtagt caagcagtat gctcacaaat caatgtcacc aggcccgagg aagaactgaa
      841 gcaccgcact tttgttcctg acagattcat ttgaatatca aactgctctg gatgagccac
      901 cagactagca aaacaagtca aaactttc
//
LOCUS       KCKM01000778             953 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12315apa ultra-conserved element locus
            uce-5255, sequence.
ACCESSION   KCKM01000778
VERSION     KCKM01000778.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 953)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 953)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..953
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12315apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>953
                     /note="ultra-conserved element locus uce-5255"
BASE COUNT          296 a          205 c          210 g          242 t
ORIGIN      
        1 gggatagcag atacttttat ttgtgggaca gagggaaggc gaggggaaaa agactagaac
       61 aaaacaaaag caaacaaaga aagaaaaata gtcttactac gaccagagct ctatttggaa
      121 actttaaaac aaatgctttg cttttactta aagctttaat attttttcct cttttaaaaa
      181 ggagccctta gggaagcaat gaagtaacca tgcacattcc aatgacatag ttatgacagt
      241 tcagaggcta actatgtagt gatgaatgaa acaaaaatga aacacggaaa gaaagagaaa
      301 aaggacaaaa aaaaaagagc ataaaaatac catgttttaa aataaacgaa agtaacgtac
      361 ctgttgggac attctgaata agaggttagt gtcagtgttc tgccatgtcc ccatgaaacc
      421 agagtcggtc gctgccgttc ttgttccgaa ctgcatggag ttgtcagtgc aggagtctct
      481 taaagtcaag tctcttgccc tctttcgctc tctgtgtctc tgtgtgtgtc tgtctctcac
      541 atccacttct gcctcttctg actgaaaagt gaaggtggat tttttgagcc tcttggcagc
      601 cagtagcagg agtgtagtgt agttaagaag ctagctgcac tgtgcgtttc atttgggaag
      661 gggggattca ggggagaggg tcagagcttc tttcgcacct tcagcagaga tacccctatc
      721 atttatgcat cgatcgtgac tccccaagct cgcctttgct cagtttaaca gctgcctgtc
      781 aggtgtgcat gcagcactaa ggagacccaa ccatcagctt caaactctca gccactggat
      841 gtcattggat agcagagcaa agagtcaact gcactgctcc actgtcaggc accaaatgac
      901 atcctgcact aacccttcag tctacagata cacagataca cacacacaca cac
//
LOCUS       KCKM01000779             964 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12330apa ultra-conserved element locus
            uce-5845, sequence.
ACCESSION   KCKM01000779
VERSION     KCKM01000779.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 964)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 964)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..964
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12330apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>964
                     /note="ultra-conserved element locus uce-5845"
BASE COUNT          328 a          176 c          180 g          280 t
ORIGIN      
        1 ctggtctagc taacttgctg aaatgcacta taccagctgt atgacttcta gctcttgagc
       61 tacctcgata ttagaagacc ccctatacag aagacctagc tctggtcttt ctgggaattc
      121 agcaagtatt ttgaacattt ctgtaggagc tacacagttt gcttggaagc agtttggttt
      181 ttagagtcta ttccaagaaa acaatgcaac tgagaagaaa cagattacat tttaacagga
      241 gtattgtatg gagtatcagt atagtcattc caatacttaa caatcatact cactttaccc
      301 tgaatatagc taagttaact gaaattgctt taatctaatt aaagcaaagc actagaatcc
      361 aaagctttct gttaacaaag gagcacttac ctgtaatcat agttagagct gatagacttg
      421 ctaaggctgg gatatcaagg ttaaggctct ttaagtttaa ggaaaagtct ttaatggagt
      481 cgagccactc cccaaatcca cgaaggcact gaagtctatg aagcacgagt ccattgcaga
      541 atacaaactt atcctcagca gtatcagacc tcaaataaaa ataattgaaa aaattaaaaa
      601 cgcatcttct agtttacagc aaaatgcata accagtattg aagtgtctgt catttaaaat
      661 ccaaggcata ttatcctgag acatatgtgg gcattcacat ttgacaatat gcttctccct
      721 tggggccaaa gtacaataaa caagcttcta tgattgctta cttggtagag ttataagcct
      781 gaggttagct gtagcatgtg gtgtagactg tctaattagt taagattttg gtcctgccca
      841 aaggcataaa cagagaagac attttacatt aaatactgta tgtttgaacc aaaggaatac
      901 tgagtgtatt ttgaaataca aaactaataa aaactgggga aagaagagat tctgcaactc
      961 tcag
//
LOCUS       KCKM01000780             776 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12346apa ultra-conserved element locus
            uce-4395, sequence.
ACCESSION   KCKM01000780
VERSION     KCKM01000780.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 776)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 776)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..776
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12346apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>776
                     /note="ultra-conserved element locus uce-4395"
BASE COUNT          226 a          159 c          130 g          261 t
ORIGIN      
        1 cttgataaga gtggtctgtt tctgacttag ttctctcaag ggctgatgtg taaggaaaag
       61 cccagtagtc caaaaggacc tggcagacta cagtaaagca tgaaaaacag agctgacttt
      121 taagttggtg ccagacacac attgtctcct ttccattccc aggtttttac ctttgctgat
      181 agactatgca aatgtttcac aatattgctt ctcaagctgt taaaggtaca aactatctgg
      241 atatttagat actatggtat ctaataggat gctatcaatc ttttatactt agagaataca
      301 taaattataa acaaatatgt cctttggtct agtggaacag cataatgatc aaagacacac
      361 aatagaaatg tatttgcttc tacagtaagc tttattcccc cagctctcag tctgcagtga
      421 tggacaggca gtaagctgtc agtttttgtt ctgtctgtca cactacactt acctcctgtt
      481 gttttaagta atcaatatgg gggctgaaat cacctaccac tacctctgct acctactatt
      541 ttgtccactc ataaattatg aatccctgca caacatcaag tctacaattt cgattgcatt
      601 tgctaatcat tgatcaataa ttcaaaagcc tcttcttctt caagggtccc tagtttcctg
      661 gaacatatgg cataaggctg acagtgttca caaaactatt cccttatcac taaaaggagc
      721 cagggaaaac aagttgttta aagttgtttt tttctttctt tttttttttc tttttc
//
LOCUS       KCKM01000781             786 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12360apa ultra-conserved element locus
            uce-6954, sequence.
ACCESSION   KCKM01000781
VERSION     KCKM01000781.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 786)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 786)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..786
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12360apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>786
                     /note="ultra-conserved element locus uce-6954"
BASE COUNT          141 a          226 c          266 g          153 t
ORIGIN      
        1 atgcccaggg tcttgacagt cttcctctcc cgggacagag ccatccttcg cttggcctcc
       61 gtgttcttct cattgcgcct ctcgaaggaa gggggcggcg gggagccgca cgcctcgctg
      121 ggcagcggca ggtgagtctt ggaggagctg ttgcagcgct ggacctcgat gatctccagg
      181 gcggccccgt cctcgccttg ccgcaccgcg ccattgacac agacactagg cttaggctca
      241 acagtccgcc gccagccctt gccgggctcc ccattgcttc tcttttgcaa ggcggccggg
      301 gagagggtga ggcaggtgtc ggcgattttc ttcttctccg ctttcttgac ggtcttacgg
      361 atcctgaagc gggccgcctt gaagatgcgg ccgtagagca ccagcatgag gaggagaggg
      421 atgtagaagg cgccgaaggt ggagtagatg gtgtacccgt ggtccttgct gatggtgcag
      481 gcatcggggt ccgagcggtc ctcgggcgtc ctccagccca gcatgggcgg gatggatatc
      541 aagaagccga taagccaggt caggctgata agcacggcgg ccctacgggg agtccgcttg
      601 ttgacatagt cgatggggtc cgtgatggcc cagtacctgt ccaaggcgat ggcgcacagg
      661 tgcaggatgg aagaggtgca gcacagcacg tccagcgaaa tgaagatgtc gcaggtgact
      721 tgccctagcg tccacttgtt cagcacctgg tagagggctg ccatgggcag caccagcacg
      781 gacacc
//
LOCUS       KCKM01000782            1016 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12376apa ultra-conserved element locus
            uce-4638, sequence.
ACCESSION   KCKM01000782
VERSION     KCKM01000782.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1016)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1016)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1016
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12376apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1016
                     /note="ultra-conserved element locus uce-4638"
BASE COUNT          273 a          230 c          200 g          313 t
ORIGIN      
        1 gcctgcctgt ggctccctca gcattgcccg acccagctcc aaccacaggg gcaaagtggc
       61 gcttgcctgg ggcagggact cctctcattc ccactccctc cccgggccat ggctccccac
      121 aggaggtgac acatgccact gagtgccatc ctcaggggag ccctgctccc aggaggatga
      181 gcatcaggca ggatacatac ccctggatgc acatcgaggt ctaagtcact ttttactgca
      241 gcagatctgg gagagaaagg aaggcagggt gatgcacctt gtccgaccag tactcgagag
      301 tcttttcata gaccactttg ttttgttggc aggtttttcc aagtatgaag tgcagtccat
      361 cacaatcata ttttcaataa aatttcagga aaatgagatg ataacaagac catgatattt
      421 taaattgaat gaatttcaag atagttaaga attagactcc cagaggaata ctttatgtca
      481 caagctatga acactactgt ttaatgtaca ctcatgctcc atctgtttcc ttttccatta
      541 ttcgaatctc ctaaccagtt tctcatgcac acttttcagc tccatgctgt gttttctatt
      601 tattgaatac atttctcact tcaacatttt tccacctgag ctggcagttg tggcttttat
      661 ggctgtacac atgcaggtct ccgtagatta tgaacttcat attttttcat ttgcctcatg
      721 cttcagttct ctagcttagt aggccctaaa atgtgcaaat tgagaggtgt tttgaagtaa
      781 ccattgctat tcttggccat tgacttgtca tcaattagat taaaacattg gtttacaaaa
      841 ataatgtttt ctctttactt cataaaaaat aaaacacttg gaaaaggaaa cccagctgtg
      901 ctaagaggca aattacttta tgtgagtaag caaacatttt ctggtcagag ctacaatgta
      961 ttattcagga ccattttact acatcagttt taaagtaatg tggctgctct gtgttg
//
LOCUS       KCKM01000783             804 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12392apa ultra-conserved element locus
            uce-2551, sequence.
ACCESSION   KCKM01000783
VERSION     KCKM01000783.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 804)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 804)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..804
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12392apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>804
                     /note="ultra-conserved element locus uce-2551"
BASE COUNT          265 a          152 c          144 g          243 t
ORIGIN      
        1 gaaattttgt attcaggaac atcaataagc aaatacaaaa tccagcatat catcctactg
       61 atagataaca taaagcattg atgtgttcat acagaagttt taatttcact gatatttagc
      121 cgtacctaag tttggggccc ggtggtccag atttcatcat gtactaacca aaatttatgg
      181 tatatttccc ttctgttcgt tactatttgt gaacatcctc ttatttggat tcttacatgc
      241 tctaaatcca gtcactgtct aaaaggatgc agtagcgttt taagatggta cagccgatgt
      301 gagaccctaa attctaggaa ttccgtttac aagcaaccca ggaatcagaa gtggctaatt
      361 tataaagaaa cacagaacaa aggtaaggca cttgccaaca atagtttgtt ggtttaactt
      421 tgacttgctt tcctgggaaa gaagaaaaca gaattttcaa tgtgaactgt cagcccctgt
      481 tatgacaggg cttcactagt tagaaattca gagttcctcc tccattggca gaatgatgta
      541 aagaaaacca ccaaacagaa ttctttcaag tttcaactac aactctactt aaataattta
      601 ctttttagtt ttactcagac tattcttttt aaacttggtt gacattttcg ttgacaagca
      661 cattttattg cacaagatca gtagtgaaat tggcagcaaa aaacagagag gaggaaaaaa
      721 agctggctca actcagtgag agaactacta tcttgccttt ggggaaaaca atgctggcag
      781 tgaccctttc tgaagccaac aata
//
LOCUS       KCKM01000784             944 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12408apa ultra-conserved element locus
            uce-8016, sequence.
ACCESSION   KCKM01000784
VERSION     KCKM01000784.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 944)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 944)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..944
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12408apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>944
                     /note="ultra-conserved element locus uce-8016"
BASE COUNT          271 a          226 c          158 g          289 t
ORIGIN      
        1 gccagtttct ccacactagg gactcattaa ttaacagctt tttactcagg catcaattct
       61 taaccaatgt aagagcaaat tcttgtctgt ggagcccttg atctttgcca aatttggcta
      121 acctgaataa gggaaattgg aagactgaca gcagaagtca tacagttgag aggtctgcct
      181 agcttttgga ggaactctca gcgcagggaa cagtaaatac aagatgacag cttccatcaa
      241 cctcgtctaa tcatacatca caaaaaatca aatccagata gattgcctca tcgtagtaaa
      301 cttttcacat tctgaacaca agagaggttg tcaagagaga tctccttttc ctgaaaatct
      361 gtggcatcct taccctgtga tttcctcatg tcttttgtgg ctaaagcacg attcccatgc
      421 ggaacactgg taaaatcagg attggtcaca ttgttaactc tcagctcttg ccccaacgac
      481 ttccgaccat aagtattttc cccagatcct ccattgacgt tgtagccacc tgtggaagaa
      541 caacccacga ttaaaacaag ccatcagact atgtatttag tagaacagtg tgttaggagt
      601 tgttcaattc atatgcaaat tagcagccct atcctctacc accttcttca gcttcctttt
      661 tcactttcac atgcagaaat gttctgttaa gccctctcag tttccaggtc acatattcag
      721 aatctaattg atctttttct ggagcacatg gaaaaccctc tactgccgtg aagcttaaca
      781 tcaattttgt tgcatttgga gctttattat tattactttt gaccctgtat tttacaaggc
      841 ccttcatgtc aatcagctag tacacacagc tagatacatc ccagttactt gcttcttgat
      901 gacacacatc aaattttcac tgtttttgtt aaaaatccac caca
//
LOCUS       KCKM01000785            1001 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12423apa ultra-conserved element locus
            uce-2016, sequence.
ACCESSION   KCKM01000785
VERSION     KCKM01000785.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1001)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1001)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1001
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12423apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1001
                     /note="ultra-conserved element locus uce-2016"
BASE COUNT          296 a          168 c          215 g          322 t
ORIGIN      
        1 agcatttctc tttgctgagg gggcgagagg ctaaccggag tcagcacagc cattgacagt
       61 catggagaac gatccagcac tgcaggaatg gagaaaaaaa tgggaaaaaa aattgaaatg
      121 tgcagtatca gaagtgataa taaataaatc aagcaaagct gtgtatactt tggggttatg
      181 gctagttgaa gtgcacatta aaagctctga actgatacat gtgaaacaaa gagcacagtg
      241 ctgaattcat tttaatcctc tggtttaagt gggtgtgcct ttacttctgg gtctagaaat
      301 aatcatactt gtatcaatct atattgtatg acttttgtaa gcggtgaaaa tagtattttt
      361 cactaaattg tcacttatta ttgttcattt gtggccacta acatagaaaa atgttgcagc
      421 tacaatgtca gaagaatagg gacaatttga tgttttcttt tgatgctgtt tgttgatatc
      481 tagaccactg cagcttgatt gcccaacatt aaacctataa taacagtgca atcatagcag
      541 tatcatcatg aatgtcgtta caatagaaac aacatttaca cggcttcaga atggtaatta
      601 tcaaactttt tgtcatgaag cgcttatttg ctagcattga tctgccccgg tcagttgtta
      661 gctcttctca tctgaggtgt attgattgta taatcagtag atagaggctg cgggcagatg
      721 aaattcagtg ttgttgggca aattattgtc tgcttgcctg ttgacctgga ccctgctggt
      781 tgtaccttag acagtggtgg gattattact catttcggtg accctactct gacagagaac
      841 tccatattat tataaaagat aaatggcatc cttctgggta tggctgaacg caggtgtcag
      901 tgtgtagtga aaccaaaaat cttgcgcagt ggtgttcctt gactttcctt tatttttttt
      961 ccttttttaa atatatgtaa aaatactgag cgttgcaaaa c
//
LOCUS       KCKM01000786             847 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12438apa ultra-conserved element locus
            uce-2775, sequence.
ACCESSION   KCKM01000786
VERSION     KCKM01000786.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 847)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 847)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..847
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12438apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>847
                     /note="ultra-conserved element locus uce-2775"
BASE COUNT          263 a          143 c          137 g          304 t
ORIGIN      
        1 ttttttttaa cattaagccc ttttccctac ccaaaacagt caaaatggaa tccaaattct
       61 ccaagaatta tagactgtct gtaaacttca ctgttagata tgtcacttca aaaatagcca
      121 tatgaagaaa aatatgtgat gcacttattg acagagaaaa gccaataaag ccaatttgat
      181 tcaggaagcc gagaaatatt ttaataactt tttgacattt tcctgtagtc cttatttacc
      241 ttatcaatag ttatgttgac atatgattgt caagttttta tattaaacca aactaataaa
      301 ttaaacatgt tgtgtttata cctgatgaaa gctgacgttt tggaaaggtg ttaaaatata
      361 ctgacaggtc ttgttcataa actcctttgg tataaatatg tagatgacat ctttagatat
      421 tgtttgtaca taggctgata ggcaggaaac gttgacatcg taacaaatgc aaatgtcaac
      481 cccacaattt aacctttctg tgtaggaaaa gatgttagtt ttaagttaca tgtatctttt
      541 aactttattt tcaaagtttt ttttgagcct gttatcattg ctgtttcatg tgccactgaa
      601 agtaacgcta caataagaaa gatttgcact taagagcttt tctctgtggt gttcctactt
      661 aaatgactac agctgagagg gtgttttttc ttctaattct tttcattttt cgtgttcacc
      721 tagtcccttc tgaatctctc tgcaatatca cctgtttgct cctgacttgc caatgattca
      781 gagcttgtaa gtgggactca agggcagtaa accggtaaaa ctattttaaa atgttagacc
      841 agtttat
//
LOCUS       KCKM01000787            1063 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12454apa ultra-conserved element locus
            uce-5947, sequence.
ACCESSION   KCKM01000787
VERSION     KCKM01000787.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1063)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1063)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1063
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12454apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1063
                     /note="ultra-conserved element locus uce-5947"
BASE COUNT          267 a          209 c          269 g          318 t
ORIGIN      
        1 cagcagtttc ctcccatatc aaaggcagat ccgctacgtg tttgtaatct tacgtgggaa
       61 acgtggtatt tgttgcagca tttcaacatg ttaggggatg tctaattaaa tgtttggcgt
      121 gtgcaatgtg caagttttgg tgtggcaata tagaaaaatg ttaaacatta atataaggtt
      181 aattttgact ggttcaacag cttgctttta agtttcccat tgacagccaa acggcagggt
      241 ttaatgctaa gcttcacatt gcagcttatc tccccttaat taaaataaaa atgtgagcag
      301 caacacagag atattttgta ggcatcctgg aagaggagaa gcagaagctc gagtgatggt
      361 tgtttaataa gattataatt ggagagttaa agccttgtga tctgtttgaa gactggtttg
      421 gtgctggtgc ggcgccgtgg caggcgagcc ccaggtgcct ggccaagcat ccctcgccga
      481 catctggaac cagttgcaat acatcactgt caaaaccgct ttctatacgt atctgcattt
      541 acacattagt tacccacgca gcactcatca aaaaagctga acaatcttga cacggtgtcc
      601 ctggtggaac ggcaaaggtg aaccgaagtt gggaggcagt gtctcgcgtc actgtctgct
      661 gagcttttac aacaggaagc ctgattaaaa ctgaaaggaa aatttatcgt cagcttctgc
      721 tttgtatcat ttttacctac aaaagggtat tttgtttcat acgaagcatt ttataaaggg
      781 ggccatagat gcttttagtt ttcatcggta tgtcttcgct atggaatggt gctttgccgt
      841 gccggtcacc gcagcagggc tggggggtct gatcgtccac acaatttcct ctctcttgct
      901 cagttcttgc tttgaattat agaagccgtc tatagttcat tcaggtttgt tgcacaggga
      961 ttgatgtgac gtggactaag gtgttaatgt gaccgagcgg ctgttgtagg tttgtcgctg
     1021 tggtggaacg agcagcactt gtgtctgcct gtgacggggg ctg
//
LOCUS       KCKM01000788            1029 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12469apa ultra-conserved element locus
            uce-5827, sequence.
ACCESSION   KCKM01000788
VERSION     KCKM01000788.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1029)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1029)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1029
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12469apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1029
                     /note="ultra-conserved element locus uce-5827"
BASE COUNT          287 a          249 c          218 g          275 t
ORIGIN      
        1 cagctgattt tacagccatg taggcaaatt actatttttc tgcacaacta aatcattata
       61 aaggtaacag cagacagaaa gcatcaccaa catctagcgg ttaagacgca ttctagggaa
      121 gtgcggtcta gctcttggaa gaagaaacat ccgtatttca gccagatctc tcttccctgc
      181 ccagccccac ctctgagccc cagcacgtat cagactttgt ccctaggtgt gaacttgatg
      241 gcaaaaattt tggtttcttt ctttttcccc caagaaaggc aaaaaggtta gtaagtcttt
      301 aaactcacag ttcttaaggc tgttaatatt tcacattgcc agcagggaaa ggaattaaaa
      361 ctgccagtag ctatccagat agattttaaa atccccttcc ctcccccttc tctctgcctc
      421 cctcagcttc tgaggatatt ttccccacaa attggtttta aattaaggaa ggtgatgaag
      481 gcaatgtgcc gtctcagcat tttcccaggt gcacttaatc taatttcatt aaggagatca
      541 ggacagatga tcgctacagt cgaaacatta agtctgtcca tttttgtata aaaaaaccat
      601 taagtttgtc aaagtgtcgg tgggtgggct gtttattatt ggagatgaag gcgcgctctg
      661 cttccccagt aaactgttag gagcagtaaa ccacaaatta agtcagctgc tgccaaggat
      721 ttaggcaaag ttctcgaact aattttgaca caggtgtggg aagggccaag gaaatagagg
      781 ctgtaagtca gtctgtgtgc tttggaaacc aacccttttg tgcgtgttta ttccaatccg
      841 acctgtcaac gagtgcaaga actggaatca gtggatacga ccaagcagaa ctacgatgct
      901 tctgacactc ctggcacaca gagctgtacg acggcgcaca ccacagagct cacaccgcag
      961 ggctccctct gctttaacct gcactcatcc tgccgggcgt caccgtcttg tctcacgcag
     1021 acgagaact
//
LOCUS       KCKM01000789            1021 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12484apa ultra-conserved element locus
            uce-4725, sequence.
ACCESSION   KCKM01000789
VERSION     KCKM01000789.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1021)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1021)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1021
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12484apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1021
                     /note="ultra-conserved element locus uce-4725"
BASE COUNT          303 a          210 c          176 g          332 t
ORIGIN      
        1 agatttattt atgcagatct gacctaacac cccatctaaa tgttttataa tcttatttgc
       61 tatcatactt caattattct aaaacaaaaa gttacagagt gtgcataaaa ccagggtgaa
      121 aaaaaatcta cagatctgct ttatgcaatg ggcaacaaag tgatattttt aaatgaacat
      181 gattgtttgc ctattgctat taatttattt tagcagtttc tcaagaaaaa aagtgatacg
      241 ctggaggata acagtgtggt aatggtcagt tcgcctcaac gctactgtag gcaacacgca
      301 tgacctcctt gaaaagaaca aactctaatt agcatcgcct acaatttctc tttccaaacc
      361 atacctttta acctgtaccc catcttttcc aatatttcca ttaaggttgt caaaagcaga
      421 agtttgggaa cctttccttg tgaccttggc atttcttctc aggcttaagg tattggcatt
      481 ttttcctctg actgcatcgc ttctcatttg tcatgattat tgttgaattt ttcaactgtc
      541 attcccgaac gtaaatcaat ggttgtcgac ttcccctttg tcatatctgc actgccaaca
      601 gcctttccct tctaaatgag gcttcctccc tttccatcca ttaaaaaagg cctgtctttt
      661 ggagaagtca atcctttgtt aggtcactcc atttatcatt cttccaatca gtacctgaca
      721 cacttattca gccaggtctt caaccacaca atcattgttc attttgggag gggggaaagg
      781 agagggagag aagggggtac tttatttatg catggtgttt tttgccatcc atcttgacta
      841 gttttatatt tttcaatgcc cttgtatctt tagggtcctt acttgcttga aggaaacacc
      901 aaattcagaa gaaaaacacc ccacacccac agggggaagg ggagagaatg ccaagaaagc
      961 attttgcttt attattaatt aagataaagt agatgagagg agaataatct aacataataa
     1021 a
//
LOCUS       KCKM01000790            1016 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12498apa ultra-conserved element locus
            uce-6659, sequence.
ACCESSION   KCKM01000790
VERSION     KCKM01000790.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1016)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1016)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1016
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12498apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1016
                     /note="ultra-conserved element locus uce-6659"
BASE COUNT          270 a          233 c          222 g          291 t
ORIGIN      
        1 ataaaactag cttagttgct gactgtgcta atcacacttt attagtcaca gtgttggatg
       61 ctgttattcg gttgtgttgt gtttcctagt tttgaggagc gtggcaccga tcttgtgctg
      121 tggtaataat ggaacagtgc acagctactt gagaaatact tgtgcagaag tccttcagat
      181 tttaaatgca catctttcag agaaacacct tgaaaaaaaa tttacagccc agctaaccac
      241 acaaaaattg tggatttttt tctggaataa agcgacacaa cacaaaacat ggacttaaca
      301 agattgttgc ttttgctttt cattaactgt attccagcgt ttaggttgtt cctgttttat
      361 gatgttcagg caagcttgtt tgccttactg tgtgtgctcg gagccctgac ctctcgcttg
      421 tgtctcgtag gcgtaccaac gtttacaaat ccagcagcag atgttacagg ctcagcgtaa
      481 tgtttccgga cccatgagac aacaggagca gcaagtaggt ttacctgcca gttcaatcta
      541 gtttggtttc aacagcttaa agagattgtg ctgcattata ccaaagcagc taaagcgtct
      601 ttagaaacaa taatatagtg cgtggcttga gtatcgaagg ggaaagagtg ctggagtaat
      661 atagctattt cacagcactc agccattgga ggaaagcgct tcaacccttg atacagtcgg
      721 tttttatttg taaagagatc tctcgggtta tttcagcgta gagaagggca gaaggaatcg
      781 accgtctttt tgttcaattg agcatttatt gattctcttt cttgccaggt tgcacgtaca
      841 atcaataaca tgcagcagca gatccagcag caccagcgcc agctggccca ggccctgctc
      901 atgaagcagc agcctccccc tccacatcta tctttgcacc cctctgcagg caaatcagcc
      961 atggatagct tttcacccca tccccaggcg cccggcctac ctgacctgca gaccaa
//
LOCUS       KCKM01000791             638 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12514apa ultra-conserved element locus
            uce-5864, sequence.
ACCESSION   KCKM01000791
VERSION     KCKM01000791.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 638)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 638)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..638
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12514apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>638
                     /note="ultra-conserved element locus uce-5864"
BASE COUNT          189 a          113 c          125 g          211 t
ORIGIN      
        1 tgacagggac agaacttctt tcctagtcta gaaagatgta taacgcactg tcagagaaca
       61 agcctgatgt gtgctgctgt agagccgggc accttttaac ctcttcagac tgtaaattct
      121 gagcagttga tatttgagtg taattcctct caaactggca ttattatttg attgcaatga
      181 attacctttt taaaaaaaaa atcataagta taaattcact tgactgatcc tgcaaattat
      241 ttatgatgta gtgttttggt ctaggataac cttttaaaat aaatcagttt ttcaataata
      301 gttcaatgtt tgcccaccta atggtgttcc cattaagatc tgcatttgtc accaacctgc
      361 cttttcagct tgtgcgggag acaagttacc gcccctaaac ccactatgct tgtagggtaa
      421 agtaaatgca tgtctttgta ggagaataaa taaaaagagc aagctgagtc aataagcggg
      481 ttcaattcat gcctccagca atggcggaca gctcattttg tagatgtggg tgttttgttt
      541 acatttataa tgcagcttta tttaatgctg acagatatag cttgtggcaa atgatagtca
      601 gaatgtatga gcagtcataa tgcttctgtc ttcttata
//
LOCUS       KCKM01000792             383 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12530apa ultra-conserved element locus
            uce-3503, sequence.
ACCESSION   KCKM01000792
VERSION     KCKM01000792.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 383)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 383)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12530apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>383
                     /note="ultra-conserved element locus uce-3503"
BASE COUNT          150 a           52 c           70 g          111 t
ORIGIN      
        1 taatatagta atcaaataaa cctgacaaat aacaaacttt tttaaagctg cagaggcatg
       61 ctaacaaatc tatttgatca atatatggga tgtgaaaaaa gaggagacaa gattgactga
      121 tgaataaaat ggaactgaca caaataggct gacagccagt cgcaagtctc tttagggcaa
      181 atgcaattaa cttagaataa tagactcaaa tttgatggtt agaaatgcat ttttattaac
      241 aatcacagcc tgaatcatta tgcactctta tgaataaaat tgtagttata ctgaaagtct
      301 gtgtatacat gtatgcatgt acatacaaaa aaaccttgtt gaaggagagc tttatttttg
      361 tgacagaaga gacgtatgag att
//
LOCUS       KCKM01000793             908 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12544apa ultra-conserved element locus
            uce-7282, sequence.
ACCESSION   KCKM01000793
VERSION     KCKM01000793.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 908)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 908)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..908
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12544apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>908
                     /note="ultra-conserved element locus uce-7282"
BASE COUNT          210 a          236 c          285 g          177 t
ORIGIN      
        1 ggcatccctg gggaaggggt gtccccatgt gcttcagggg aggacatatg ggatggggag
       61 ggggaagagc tgcccctgca caggggacaa gccactgagg caccgtatcg caggctgcct
      121 tcccagcccg gacaaatccc tcagacccca tccaggagca actgaggcag cacaagcagg
      181 aggctggcag gatcccggga aaaccatggg gacagctctg gaaagctcct gacagctggg
      241 tgctagtgcc aagcgcagct cacccgtccc agccccacac cagggtcagc ggggagccgc
      301 tggcgtgtgt cccagcccca ggatcggccc cgggaccatc tctgcatcgc gttttgcttt
      361 cttgatcaag gtcattcggt acagccgctg tacctgagca aactaactaa gcagctgggg
      421 tggaagttgg cctgaccact gaaggtcaag tgtgcattta tgcatattca aagctgcctg
      481 caggatcgat cgggttttaa ttgtttttcc tggggttttg gaaggaagtg ccaggggcat
      541 tgatcagtcc cagacgaggc cgttcacact tcagggctgg cagggaccgt cactttgctg
      601 caggcagagg gaaatgaagg cagagaagaa ggcaagccag gggagaggtc agccagccct
      661 ggccgggagg aggagccatt gccgggctgc gttggaaaat aaagtttttt aattaaaatt
      721 ggcaattctg agccgcctgc cggcagcagc cacgcaatca agagtgagga gctttgctgt
      781 ttaatattta aagacaacgt ttaatcttta aacaggaaag ttcttcttct gactgttaaa
      841 gcgaggcaga aagtgccgga ggctccctga cgcaggcctc cccagcccgc tggggtggct
      901 gtggccac
//
LOCUS       KCKM01000794             752 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12560apa ultra-conserved element locus
            uce-943, sequence.
ACCESSION   KCKM01000794
VERSION     KCKM01000794.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 752)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 752)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..752
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12560apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>752
                     /note="ultra-conserved element locus uce-943"
BASE COUNT          214 a          110 c          149 g          279 t
ORIGIN      
        1 cactatttta gcataataaa agaaagtcca aagagctcct atatagacta ctccagataa
       61 ctttgcttca tcggtatttg tagcttattg taactttttt aaagaaatac aggatcatca
      121 tcatcgtatt gtacaaaagc gctttgatta acacgacagc tatctagttt tttaatttta
      181 ggaaaaacct gtggagacag tgatctagtc tttaagagtc ctttcagtat aacgtctgac
      241 taaagacatg gcctttaata tctgttggga aggaaatgtc cagacttttc aaccttttat
      301 tgtatgtttc cttttccttg tttacatagg gaacaatgtt tatagttgtg tgtacagtgg
      361 gggtctacaa caagaagtgt atattttaaa acgatttttt aatgatttaa caattttttg
      421 taaatcattt tcgggcttct gcagctgtag attctcactg tgaattccct tgcttgctca
      481 tgcataagtg tatttgcaat accaaatata caggtttagt acttttgcct gttagtgatt
      541 gttttacatg tgtaacgttt tggttgagat gttaaatggt ggaagagtac tgtggatgtg
      601 aatgtgggaa gtaattttaa tcatgtgtaa ttggtcacag ggcctaagtt gcagtaatta
      661 acttttgctg atttatttaa caatgccttg ttgctttgta tgcattaacg tttgggtgta
      721 aagattgtgt gtatatccaa cagggagcca ca
//
LOCUS       KCKM01000795             775 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12575apa ultra-conserved element locus
            uce-1389, sequence.
ACCESSION   KCKM01000795
VERSION     KCKM01000795.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 775)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 775)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..775
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12575apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>775
                     /note="ultra-conserved element locus uce-1389"
BASE COUNT          281 a          132 c          135 g          227 t
ORIGIN      
        1 tcaagtaaaa tctccgataa tctcaaccag ctgaaaatga cagcggttgt ctagatcaca
       61 gcagctatat atccactcac gagcttcaag gtggtgcaga gtgcttaatt gaggaattta
      121 aaaacaacga ctgaaagaag cacaaatttc aaagcaaatg aaatagggag accctttgaa
      181 acctaaactt tagtgacagc ccctacagat agtacagcta ttttctcaat acatgtgaaa
      241 tttgactatg gaaagaaaga taaggagcaa ggcaacagtg tgtatttaaa aacacgtgca
      301 caccatctga tgttttaaac ttttgccttc ctattgctaa aatatcattt ttttaagtcc
      361 ataaaatttc agatagtgta caaaatgttt atatattacc aaggtctccc tttaaaaggt
      421 ttatactttt actttatgac ctgtccttga tttgacactt ccgctcatca gaaagggatt
      481 tataaaataa tcctgaaggt gaggaacaga catctgtcag ggactggctg agtttcactt
      541 tgcgaaattt aagaagggag agaaatcctg ttaagctctc tttagtcacc aatagacatc
      601 aaaggtaata attaaagaag acagacgtca taaaaataaa tttatgtagt tctttataat
      661 gcacaagcac tctagtgtgt aaaacatcta tgagagtgaa agaaaataca acattccaaa
      721 tgagcaaaaa tctgttttgt ttgagttttt ttgcctactt gagtaacata aaaaa
//
LOCUS       KCKM01000796             833 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12591apa ultra-conserved element locus
            uce-3713, sequence.
ACCESSION   KCKM01000796
VERSION     KCKM01000796.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 833)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 833)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..833
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12591apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>833
                     /note="ultra-conserved element locus uce-3713"
BASE COUNT          295 a          121 c          118 g          299 t
ORIGIN      
        1 tttattgctg ttccaaatga gtaagaaagc agaaacacac aaatatggat ttgttttcca
       61 atattgcata tgtctgtttt atagtctgat aaaagtttta gttgacacag tgctaaataa
      121 atgtagccct gtacagtatg tttactcaaa tatttaactt gtgaaattta gtaaaataac
      181 aatttaaaca gataaggatt agtcaaatag aaaaactatt agaaacattc acatcgttca
      241 aaataaaatt ctcagccatt atcagatgta ggaaaaccac ataagaatcc attaaaaaag
      301 ttttcaagct ccaataagtt agatataata gacctttttt gtcaaacaca aaaataaata
      361 ttattgattt tatgaataaa tacattttct taaatgattt agaaagctct gtttattcat
      421 atacagacag tgtttagaat atgtagtagc cagtatgtct gcagatatat ttatgttgga
      481 ctgtttagat tggcttcacc tctgtaataa tttataacag tttcaatgta aacctgccat
      541 tgagcaggtc ataaaggtcc tgcattttaa ccatcataat ttcagataaa cccgcaaaac
      601 tatttcttgc aggaaagctc tagttaatcc tcgaatatct ttgggatgga atttgttttt
      661 ttatttaggc aaatttaaag agcaataaag gctgcatttt aactatgttt gatattccag
      721 tactggtgat aatttaaaat atatacattt tgttttgttt tacagcagta acttttcatt
      781 gacacttttt aatacaaaaa ttctgccctt ccattgattt caagtcttgc tca
//
LOCUS       KCKM01000797             409 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12606apa ultra-conserved element locus
            uce-1361, sequence.
ACCESSION   KCKM01000797
VERSION     KCKM01000797.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 409)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 409)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12606apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>409
                     /note="ultra-conserved element locus uce-1361"
BASE COUNT          144 a           87 c           63 g          115 t
ORIGIN      
        1 gggggatgtt gattggaata taaagggtta ccatacctct caggccattt tgataagata
       61 ttttaatacc aatttattaa agtaccagca tactagtgat attgctgcaa ttcattgtac
      121 ctagaaaact cagcatttta tagagttcta aggcagccca ataaagactc gctccactct
      181 aataaagcaa tactccgggc aaatttacgg ttgagttcta ttctaataaa tctccaattg
      241 taaactaatg aaaagacccc agtatacctc cctcatccac tcacacaaaa ggaagcaatt
      301 tgaaaatgtt tgacaaagta acactgcaca tcatcagcac tgaagaacct catttcccgt
      361 ccatggagat attgcattat cattcatatt aaagaataac ccaatggca
//
LOCUS       KCKM01000798             302 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12620apa ultra-conserved element locus
            uce-180, sequence.
ACCESSION   KCKM01000798
VERSION     KCKM01000798.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 302)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 302)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12620apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>302
                     /note="ultra-conserved element locus uce-180"
BASE COUNT          103 a           59 c           50 g           90 t
ORIGIN      
        1 ctgaattaaa ggatttttgc tttctttacc tgtcgtagta cgaacactac ctagcttcta
       61 aacaccagca caaagcagat caggcatgaa atggtcataa gtattagttt ccagtagatt
      121 tcacttttct ttttcaagct acagcttgac attttgcaaa acctccggag accaaacagt
      181 gaaatcgagt tactgcagga gtgaactgta aattccatga aaccatgtaa tatatcttaa
      241 cacagatgga cacagtacat taaaataact gtggatgata atagaacaat accatctgtt
      301 tt
//
LOCUS       KCKM01000799            1070 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12635apa ultra-conserved element locus
            uce-7297, sequence.
ACCESSION   KCKM01000799
VERSION     KCKM01000799.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1070)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1070)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1070
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12635apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1070
                     /note="ultra-conserved element locus uce-7297"
BASE COUNT          340 a          233 c          200 g          297 t
ORIGIN      
        1 aacattttgc agaataatcc cttgcttatt tctcaggaca ttgcatataa tttgtttgta
       61 tgcattctgt ctcaagttag aaacaaagca gcacataaaa accaaggcag ataacagcag
      121 cgagatcccc gattttctga caagtaatca gcaagaaagc atgcaagcag catcacttgg
      181 aggatgcagg ggggacgaga gtacaggaat ttttatccta tataaagcca tgtagcctag
      241 caaaaacagc ctttggcatc ttgtttctgg cctacctgga cagtggtaaa catgtttatc
      301 agaccataca agcccataac ctgaactgca agcagttaaa aactgaaggt cgctaagctg
      361 caaaaattaa aacatgcttc tatgctttag caacacagac aacgataaaa caaagcctcc
      421 acaaccacct gtaataatat gcctgttcag ctagcaattc caaagtactc agcaacacaa
      481 ggtagacatt ttctgcagct ggttttacat gtacattcct gccaaattgt tgtctcgtct
      541 cctcttacct tcacattagt ccggagtgca cagtaacatg caaaaaacat tgcagtaaac
      601 aaggagcata tggaccagta ttcagcgtct ctgctctgca caaacggtac acacacgatc
      661 ccgagcatgt gctactaagg agcatccgtt ccctctgtca gtttgaaaat gcattgatct
      721 ctgtttttct gactacagaa agacatgtct tgaaggcact gagtgaaagc tacatatctt
      781 tccattgact atatatagaa atatgcccag taatctcaat tagcagagaa ttcggcatct
      841 gaaacttgga cctcagttgc ttttccttcc agcattttaa attcacgggg gaaagaggag
      901 ggggaactca cccagagggg aaaggtgagg aattaaaatg taaatagcaa gttacttata
      961 tttccccctg gctttgatgg ttttctcttc aatattttac aaatgtttta catggaaaaa
     1021 aaatgtttct tttccaattc tcaaatttac tgtagactct gcactgtttc
//
LOCUS       KCKM01000800            1010 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12650apa ultra-conserved element locus
            uce-6260, sequence.
ACCESSION   KCKM01000800
VERSION     KCKM01000800.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1010)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1010)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1010
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12650apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1010
                     /note="ultra-conserved element locus uce-6260"
BASE COUNT          318 a          200 c          157 g          335 t
ORIGIN      
        1 ttttaaattg catttataaa acactttaag atttgacaac gttatctata ctctgatatt
       61 acactgagat gggagatatt taatgctcca agcattgtaa atcaagtact aatcatataa
      121 aagacaaaac agtcaaataa ctgagacttc attatgcaaa actgtagttg catattcgca
      181 taacataaac atttacacta actgggttat tcacagatga aaatcaaatc catttcaatt
      241 cagacaattt ctctgcatta ggagaatgaa taaattaaaa gtgtgctcca gtaatttact
      301 cttcccaagc agctatcctg caagctctgc agaggatgtc aaaacctgct gatatctagc
      361 agagtcaact ccaagtttgt gtatcccggt ccactccacc tttccatcag gcagtacatg
      421 tggaaatgga aaagtagctc tctaattaat caaagtcaga tctgcctgaa cgcctggagt
      481 tgctgctgat ccttgtccca gcttctacca tgttctctct ctatgttttt taccttgaaa
      541 acttctgctc tgagctggga atgcctgaag ggcttgcacg gtaagtcaat gtgaaattat
      601 ctcagcagga agaagttgct tttcagctta aatgatttaa ggcagcaatt tttcacactc
      661 tcaaactctg acaaacgcac agattgcctc tcatgtttga cttcaaaata ttcaaagaaa
      721 agctattttt attaaaaaca ctctagagaa aattgtatgt cacttgttct ctgatataac
      781 ttcatttctc ctgacagtga caattttcac ctcagtacaa tttctttatt ttttccaaag
      841 ctaattctgc ttaatattag tatttataca aactcatatc aacttgtctc tgtgaaatgt
      901 tcaagggtgt caggtaaatg ttgctcactg tcagtcatct tctttggtgc tcaaaatgat
      961 caatagatta aaaactgcag ctacttactt gagatattat tgttttattt
//
LOCUS       KCKM01000801            1078 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12666apa ultra-conserved element locus
            uce-7764, sequence.
ACCESSION   KCKM01000801
VERSION     KCKM01000801.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1078)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1078)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1078
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12666apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1078
                     /note="ultra-conserved element locus uce-7764"
BASE COUNT          290 a          271 c          257 g          260 t
ORIGIN      
        1 gaagaaagtg ggaaaggagg aatagatacc atgcatgcag tacaccagaa agaacagtct
       61 cattttaagc aaatccagac aagcatgaat ctgtccactt tgcagctcac aacaggacct
      121 gccccttcct tctccactca gcgttgccaa cgtgccatcg acacggtggc aggaacccca
      181 ccgagcgcga agagattctg gttgtgcatc ttccgctcat gacaaaaatc tcccagaaat
      241 ctcctgtctc agccaggcag acacagcact cggaacctac cagaatcaat tccggggtca
      301 gtcttgggcc agcccaggaa tgtcatgctg atgtaggtcc cggtgagcac ccttccactc
      361 tgtgtctccc actcttgctt aaaggcacac ctaaaaggga caggagtccc ctgactatgg
      421 ccacgagatt ccttcctgca gatgggccta tatactactt tccagagtgc ttccccttta
      481 agacaggact ctgcagtctt tatttgcttg ttgaaactgt tcagttttag gacagggggg
      541 gaggtcacac ctgttgtgga acttgataga aggcttattt ataaactttc agagcttggg
      601 attcttgcag agctgaatgc gctgatgtcc ggaggggaag gtcaccgaaa tgcttgttta
      661 taaaagcagc agcaactgga aaaaccataa aagtctgaaa tgatgaaatt aataagctat
      721 ttgatcaggc gcatgggcta tgtgctctgt ggtcagccag aaaaacctcg cacgtaagag
      781 actaccctgc tggctcctac cctgaaattc tccttcagag gccaacgcgt tgcacccgaa
      841 gagggcaaaa aataatcagc tgcttagtat ggtctacttt tgggtctctg gctggtccag
      901 tcttaatttg accttgcatg gaaaggggaa agcatactct gcacttggta tcacagctaa
      961 tccactcttc agtttcgcaa cttcaaagag ctgcaccact tgttaacatg cagagtgttc
     1021 ttttagcaag gagtcagtca cacccccaaa atctgccact gctggggagg ggggaagg
//
LOCUS       KCKM01000802             915 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12682apa ultra-conserved element locus
            uce-2370, sequence.
ACCESSION   KCKM01000802
VERSION     KCKM01000802.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 915)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 915)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..915
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12682apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>915
                     /note="ultra-conserved element locus uce-2370"
BASE COUNT          257 a          179 c          193 g          286 t
ORIGIN      
        1 ggtggtgctg aaataaaacc acgcacagaa ggtctacgct ctgtgttgtt cttgacttgc
       61 agaatgtctt agatgtacgt tgtaagccgt tgacaaactt tgttggttta gagatgtgac
      121 ggatgtattt tctgatctga gaagtatttg ggggatagag agaaattttt tttcatcctc
      181 ttttccctct ctctcctcct ccccctaaaa gagcatcagc cttctctacg actctaatct
      241 tagaggctcg ataatacggt tggagatttg acatattcct actgaataaa aatcaggaga
      301 cccttaccaa aattgttagc aaaagggact ggcagaacta ggtacggagc ggggtgggtt
      361 ttttttcttc tcctcttcct ttccctagct gtctaggagg agtaaagcag gtggctcccc
      421 gtggctgact tttcatgaca acatgccatt agaaattgcg gtcctgttga tcaatccact
      481 cgacatgaca gctttgccgc aaggcctggc tctttgagca ccagcgctct ggcttttccc
      541 tccttttttc ctgcactaat tggtgaaagt ttttactgtg cttgtggcat aggaaattct
      601 tttgaacatt gtcacaatca agtgttgact tctttagaat tgcaagtagg ttaagtgagt
      661 atcaacatta aaaaaaaaaa atccacaaaa ggtattactg tcgaaatttt attaaagtga
      721 aattgggaaa acatgctgat cgaattctag aaagaaaaaa aaatgataca gaggagtcaa
      781 ttaaaataac gttccttttc aactctgcgt agccgctgcc atgtttgtgt ctcaaaaaag
      841 tataaggaag agacaaattt agagttctta ttttcttttt tgcttagtcg aaagcacaga
      901 acggagccac gtctt
//
LOCUS       KCKM01000803            1031 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12697apa ultra-conserved element locus
            uce-8046, sequence.
ACCESSION   KCKM01000803
VERSION     KCKM01000803.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1031)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1031)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1031
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12697apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1031
                     /note="ultra-conserved element locus uce-8046"
BASE COUNT          227 a          239 c          224 g          341 t
ORIGIN      
        1 cgggtgcggc gcgacctgct ctctgggacc cagtgaagta tcagcagctg agcgctgtct
       61 tgtttttcac ttcttaactg tgtcatcgga gagatgctgt tcccaaattc cctgttcctt
      121 gtgttcccct caggaacatg taattgttta gaggaatgtg cccggagggt ctgggtgttg
      181 tttcagtgcg tcctttacaa ttgtggagtc tgatgaagcg ccatagagtg ccagcgaggt
      241 gaaacccttt ctggccccat tgctgaaccc ccttatcctg cctcagaacg tgtgtttcac
      301 tcactgcctg atctacattt cagggaagct gtacaccact aatggtagca actcttcatc
      361 ctcaagtagc caccatcacg ccgcagtatg cggtgccctt tactctgaac tgcgcagccg
      421 gccggccagc gctagtagaa cagacggctg cagtactggt aattgcctcc cttgattgtg
      481 ttcactaact gagtttttgt tttaacttag acttgcagag ggcatggaag catgtgccat
      541 cttgtggctg tgttcttgct acatcttaat gtcttgttgt tttcctccca acattgctga
      601 agcactgtct gactctgacg tttagtgtgg ctctgtaaag aatccagatc cattgactat
      661 cacattttac tagcctagca ttatacagct cttctaagct atactgtaga agagttacaa
      721 ttgttcttgt tcttgcttgc tatactatct ttgccttttg gttgttgaat acggaggaat
      781 cggcctttag cttgactctg ctacaggtac ctggatggcc agaatttgaa ctacttgaca
      841 agttagctac atattttatt ctcaacgtgt gtaaaactgc tttgcatgta gaagtgtttc
      901 agatcattaa gcccaggcta aaatctgtaa tgatagcaaa ttctttaatg tattgctcta
      961 gcagttattt ctcttaacct ctcttgaaca ttgactgtaa ttttctggcc ttttgttatt
     1021 tatagtcaat c
//
LOCUS       KCKM01000804             821 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12712apa ultra-conserved element locus
            uce-169, sequence.
ACCESSION   KCKM01000804
VERSION     KCKM01000804.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 821)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 821)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..821
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12712apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>821
                     /note="ultra-conserved element locus uce-169"
BASE COUNT          246 a          132 c          162 g          281 t
ORIGIN      
        1 tattgtttcg catcatgtgt atatacatat ggatgttggt ggctgggtat ctagataatt
       61 ggatagacat atcatagaag aagctcccat taagttattg cttaactttt aatctgctcc
      121 ttttaatact aaactgcttt ttcatattgg aaaagcacta catttttaaa aaagagagta
      181 ttttctatac aagatttctt tgctggtaaa gtcatagtaa aatagccata tagttttaca
      241 gttttaacta ctgtacaaag tattgaagta ctttgtgagt tttaaccatt ttatgtaaac
      301 cattccttat catcaaaggg ttatcttctg acattgcaca gggatagaac tatacagtaa
      361 ataatgaatt gtgggatgca gccaggcttg cagaaaataa ctatttgagg gatggtgcat
      421 gaacagaaag ctgtaatttt gacaggtggc aaggtgtcgt gtcaccaagc ccttctaaag
      481 cctcatatct catacctatt gattaatggc tctaattaag gaatgaaatc aagcatgtga
      541 agacagggga tcgctttagg tccttgtttg gtagttttct cttcctggcg cacaactcat
      601 ccatctaaat atcactgctc tttcatttat tacagttgga tgataccaaa aaggaactgg
      661 aggaggtgca tgctgatctt gtcatggtca tgcaggaact tgatttggca agagctgatg
      721 taagacaatg tgtatgagca taatctgaat gaatgctgca ataccagctc gttgatcgtc
      781 tctttttggt tagcaaatgc ttcttataat tttattattt t
//
LOCUS       KCKM01000805            1001 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12728apa ultra-conserved element locus
            uce-7538, sequence.
ACCESSION   KCKM01000805
VERSION     KCKM01000805.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1001)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1001)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1001
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12728apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1001
                     /note="ultra-conserved element locus uce-7538"
BASE COUNT          231 a          190 c          228 g          352 t
ORIGIN      
        1 tcaatagaag ttgtttgacg gttctgcaaa agggtaagaa gccttttctt aaacttttat
       61 tctcctgcgt ttgtctcagt tcagaaagtt ttctgctttt gtttttcttg cctcgctttg
      121 ttgtcacctg tctgttgttg aagggctttt gtcgttgctg tttagccagt gtgaggtagg
      181 ctgatatttt atgaaatggt ccttgttgaa cagtgatctt gtacaggtga agcagacatt
      241 tagagagctt atgagaggtt tactgtggtg gtccttgggg caatagactt ctttcaaact
      301 tgtgttttta tttatttagc caggggatga aagcgaaaag tgaatgagaa gaaaaattag
      361 cgtgtgcttt ctgctgaaga atgccctgtt agcacttgtg cgactccata aggctttctg
      421 agatgtttag ccttgattta atttgtattt aagatctctc ctcccagcac attaatataa
      481 tgccaatgta gaatgcattg catggtgtaa ttactgaaga gagcagtagt tgggaaaaca
      541 gacggtaatt gaacacatgg ctgtttatta caacaggaca gtgctcctac gctggtattt
      601 agggcattaa tagggaagaa ttgatttgtt gttttaagat gaattcaatc actgttgctt
      661 aggcctttgt ttgttcaggc cgagttatgc tttgtttgtg ttatgtgccc aagaggttta
      721 cacaccacag cgtggcatta gtcatgcaga gggcttggga gcagagagcc atttaaatga
      781 acaaaggaca tttttctttt tggctctgtt tgtcttcctc tctagttttg ttaccttcta
      841 atctatctcc atctctctct cccccttcct ttccgcccca aacatttttg atcaatgcag
      901 aggtcctccc gctttcttct ttcccccttc tctttattca ccctctcgaa gacaaatgga
      961 gctctgattg acaggtggca atgcagggtt gcggcacggt g
//
LOCUS       KCKM01000806             829 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12744apa ultra-conserved element locus
            uce-5978, sequence.
ACCESSION   KCKM01000806
VERSION     KCKM01000806.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 829)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 829)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..829
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12744apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>829
                     /note="ultra-conserved element locus uce-5978"
BASE COUNT          244 a          168 c          140 g          277 t
ORIGIN      
        1 tccctcccat ctgtcatagc cccgtggtgt tggaaatggg aggagaggct ctcgtgtgtg
       61 cacacgaagt ccccgaactg tcttcaggac tgagggcagg aagccaaaat caaatcttcc
      121 tttttttttt ctcttctttt tttcccagag tgtatcactg gctattgtcc ttatcaaaca
      181 aagccctttc atcagaggtt ctttaacaca ctttatttct cttttatttt gctttgaaat
      241 aacccgggca acaattaatt tcagagagag agagagagaa agagaattca acaaggatct
      301 attactactc tcggcttcta ttgctgtaat gaaaatctat ttcctttccc ttttgtgtcc
      361 catataattt aatgcccatt ttattaatgg tctgaaataa ttacggaacc ttttgtgatt
      421 ctcaagtatg tttcatttaa ttgtgcaata aacgcctaat ctcttcctcc atctgaagct
      481 attatggcat taaaattaac aattatgcag caatgcgccc gggtccatag aaatcactcc
      541 agataactag acatatataa atcattcatg agaacaattt ctgaaaagag acgaagggag
      601 agaagaaaaa aaattgtgtt gagaatgaca ttgggaagcc aagggcctgg tctctaagaa
      661 gatagcaaca ccttaaaaaa aatttttttt cttctcccct tttttgttat tattatttta
      721 ctaattgtgt tcagtggcac agcccccccc attagtctga cagatatttt cagaattaat
      781 taactgttag ctcagaggat aaattgttca ttatcaattt tttccccct
//
LOCUS       KCKM01000807             748 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12760apa ultra-conserved element locus
            uce-5510, sequence.
ACCESSION   KCKM01000807
VERSION     KCKM01000807.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 748)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 748)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..748
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12760apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>748
                     /note="ultra-conserved element locus uce-5510"
BASE COUNT          178 a          145 c          196 g          229 t
ORIGIN      
        1 tccatcacct cctgctttca tttctgctag ctctgcctga aaaaagaggg acgggttttg
       61 gcgggctgct ttctgcgctg ctgtttgttg gatttctgtt gctcgccacg ggcagcctct
      121 ccggagcgtg cgtgtgcata cgtgtgcgca tggccatgat ttagtggccc gtgcgatgcc
      181 acatgtcttc aaaattgcag tgcccatttc ctgctgaaat aatttctaca aagagaggct
      241 cctattacag caagaggagc gtggacgtca tgatttatta ttatttatgg tcccagggcc
      301 ttgtttatgc acgatgggtt aggtgctcag gatagaaatg ccattatgca aatgacattg
      361 aatgtcctta ctgagcctaa ataatttttg tgttggacga ttaaacctca tctgttattg
      421 atatgggctg cagtcgggct attaaagagt cccaacagta cttactccca gtaatgggaa
      481 aattgagagg aagaggctaa acaattgcct caagtgtgcc gtgattgtct ggtaggagtg
      541 gaacataacg aaccccttga atggaaatcg tgtttactac ttagggataa ataaaaaggg
      601 agaacatgca ataaattacg ctttgtgatg tgagtcggcg caccagagaa tttgcatgct
      661 ttcaatttat ttatttgatt tttttttttt ttttgagggg atgggttggc tctaggtgcc
      721 gggggcaggc aggaccgtgg ccgttgtc
//
LOCUS       KCKM01000808             524 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12775apa ultra-conserved element locus
            uce-7943, sequence.
ACCESSION   KCKM01000808
VERSION     KCKM01000808.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 524)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 524)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12775apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>524
                     /note="ultra-conserved element locus uce-7943"
BASE COUNT          186 a           75 c          107 g          156 t
ORIGIN      
        1 agtttattaa cagtcattat ggttagggtg gacaaagtgg agttttcaac tgcattagta
       61 aacttacgat tttgcaaggc tgtagtaaac actcctgtga agtaataaga gaatggaatc
      121 atagaatggt ttgtgagaga atacatatat tagcatacac ttctgtgtta aagctgctta
      181 aaaatagctg tattatttac tggtctagga aaaaacataa tggactatgg gtaagacatt
      241 ttcccattct taattaaact tacaacagga aaaactaccg aagatatgtt tcagcctcaa
      301 tcctatataa aacagtcaaa acagggatgt gggaaaatga tggagcaaag cacaggtaag
      361 tgtcgagaag ggcatgggtc ttcaccatat gtagcttcag gaagtaggcc agtgaatcca
      421 gttgcgttta tattttaata taactttttg gagtacgtag ttcatgatac tacactacta
      481 ctgcacaaat aaattaaaaa taatcatgtt gtcataagaa tgtg
//
LOCUS       KCKM01000809             788 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12790apa ultra-conserved element locus
            uce-2451, sequence.
ACCESSION   KCKM01000809
VERSION     KCKM01000809.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 788)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 788)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..788
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12790apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>788
                     /note="ultra-conserved element locus uce-2451"
BASE COUNT          181 a          167 c          176 g          264 t
ORIGIN      
        1 ttctccacca gctgcaggtc cattctggtg tctgggtgca tttcttctat tttatggtct
       61 aaatctgcgg tcggattcta tactgctcta agctggcaga gatcctttta tttcagtgga
      121 tctgtagcaa tttacactgg ctgagaattt ggcccctaat gtcaacaaaa gttttaactg
      181 gggaaaaagc agtagagaaa actaagtaaa ggtaaatctg ttgctgtcgg gagacatttt
      241 tgttatgtaa tcctaaaata gtagtgtttt gagtgtagcg ggttcggtca tcctaaacag
      301 aattagtaca gttgggaaag caggggggga ggtgtggatg tttcaaggag gtctttgaac
      361 gttttcttca aatgttcatt gcatctagga tcccattttt tgtgtgcctt tatttgctcc
      421 agaataccgc tggactgcca acaaaggagg gcctgtcctc ccaggaattt tctgcattcc
      481 tctctggagt aggcattttt ctcagctaca aaggcccttt ggcaaattcc ctctaatcat
      541 tggatttacc ctgggctctg ataggtgcca ttcatgaact tggtctgctg tttgatgggg
      601 ctgaagcatt aatgggatct tttcacgata aacaaaacag agtaacatta ctgaaggaat
      661 cacaaagctg ctcttgtagg gcagtgcggt tctttctccc tctgctctct ctccgtttcc
      721 ccccattctc cattttcctt ttgttttgtc cctcatcctt tccttgcctt gatgaacaga
      781 cattgttt
//
LOCUS       KCKM01000810             935 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12804apa ultra-conserved element locus
            uce-2886, sequence.
ACCESSION   KCKM01000810
VERSION     KCKM01000810.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 935)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 935)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..935
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12804apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>935
                     /note="ultra-conserved element locus uce-2886"
BASE COUNT          284 a          185 c          158 g          308 t
ORIGIN      
        1 ttcacttaaa cacatcagtg caactgaatc gtgttactaa tggctatttc aggggaacaa
       61 aaattctgta catcatgtag acctgcaatt taggccttcc aggctgtaca taatttttcc
      121 ttcctaaatt tacatttatt tatctatctg aagtgtcatt ttgcagttga ccaatatgca
      181 tgtttcatgt ccatccttat tcctttctgt tttaatgaaa tgcactcatt aaacctttag
      241 tccacgtgat tctttaaact tacaatgtaa ggggaaagag agaacatttc acagtggtat
      301 tttattgcac gtgtccctta aaatgttcaa acctgtaata ttgttcagcc cccaggtgca
      361 gaacatgaac tcctgaggtt taacagagtg attcacttgt ttcactatga attcaaagtg
      421 gatatgaagc ataaatcccc tttttcccct ctgtaatata gtagccatga atcacaatgt
      481 cacgctgagt cgatcataat ctaacacttc acgcctcagc caacaacttg atttgtcaag
      541 agaacagacc tgcaagctgc caatagcatt gattcccatt ggagaagaaa ggataattaa
      601 gccctcagtg agctaatttc ttctttcttt tataaaaata atgtttactt ttatatttta
      661 agtaaacaga aatgattaaa tgttacatat gtatagaatc agtgaagtgc ttactttccc
      721 taaatcacta gtgtgaggtt ttgttccgtt tccacttgat aaaatgtgac caggatcatt
      781 ttatttcacc atacagtaac acacagtgct acgtctcaat tagggaaact gaagctaaaa
      841 ttaattacat gcaatttgca tgctagctgc cctgcagcag ggtaccacca ttcctgggta
      901 taagcgttgt gagcttcatg gtgagtgtga ataat
//
LOCUS       KCKM01000811             748 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12819apa ultra-conserved element locus
            uce-3444, sequence.
ACCESSION   KCKM01000811
VERSION     KCKM01000811.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 748)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 748)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..748
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12819apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>748
                     /note="ultra-conserved element locus uce-3444"
BASE COUNT          252 a          111 c          131 g          254 t
ORIGIN      
        1 ggacccaaga atgatttcta agagtttcac tcattataga agttcaactt ccttctacaa
       61 gatgttgttt ttatgacaca aaagtgtgtc ataaaaaatt aacttttggt tataagaagg
      121 agatgttttt atttgactta acatctgtag cagatgtgaa aaatgtaatt atttttgtaa
      181 aagacttcat aactttcacg attcttttgt ttggcacatc tttcttctat tgggcatttt
      241 agacaattga taagcattat tcagtggcat atggtctgag tctgacgtgc tttgaaaaga
      301 gtacagagta ctaataatga ggattctgtg aaaatgggaa aaccagcaca acagatatgc
      361 tttgagaaag tatgggtttt tagcatcttg aaacaatata tcacactcaa agggacagaa
      421 ttgggctgca caatctgtta gctcattctt gtccaatctg gtctcctcct ttcttttgga
      481 gccagcattg tcatcaactt gctgaattat actctgactg gaatgtattt caggcacagg
      541 gtaatgtatc tacttaaatg gaatcctatc tttctacaaa agctttttaa gtataataaa
      601 tttaaaatat aaaaaagttc tattagctta aagtaaatgg ttcaacagtt tacatatgtg
      661 caggaacaaa gaaaatgact acttactagt ctgagaaaaa tctagcttat tcagagatat
      721 aaaaggtaga aacaaacttt agttttta
//
LOCUS       KCKM01000812             551 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12834apa ultra-conserved element locus
            uce-357, sequence.
ACCESSION   KCKM01000812
VERSION     KCKM01000812.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 551)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 551)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12834apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>551
                     /note="ultra-conserved element locus uce-357"
BASE COUNT          204 a           91 c           93 g          163 t
ORIGIN      
        1 tttcatgtgt ggcacctact tgtattgaac ccatggattt attacaatga gcatcacttt
       61 aaatgagaac attctcattt tcaaaggaaa ataagtagtt aatggtttca gaattattat
      121 tcttttccac acaatctcat aaaaatttcc caatgaaaaa gctaatagac caatggcgag
      181 atgcttacat atgcaaatat gtttccgtga aagagttaaa gtgctttata atataaattt
      241 gctttcagtg ccaatataat tagattgtaa caagcaaacc cctgcaacat aacacagtga
      301 aaatttgaaa atttgattct gcctggcaaa caaccaagtc cctgcgtgtg cacaaacctg
      361 acattaataa gctacaagag attacatgat ttagaaaaga agcacttggt gttacaaaat
      421 caaataatag atctctaggc tataattagg agaattggga ttcaacaatg aagtcataat
      481 aatgtaattt agctgtaagt aacagagcca tggagtcaca ttaggaggtg tgatcacatc
      541 tttcagcaaa g
//
LOCUS       KCKM01000813             826 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12850apa ultra-conserved element locus
            uce-2344, sequence.
ACCESSION   KCKM01000813
VERSION     KCKM01000813.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 826)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 826)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..826
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12850apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>826
                     /note="ultra-conserved element locus uce-2344"
BASE COUNT          179 a          224 c          210 g          213 t
ORIGIN      
        1 ttgatctcat ctgtgttgca ctgaccttcg gatggcagcc acaaggaatg agaggtggca
       61 ctggtcccac cttcccttcc tagcactgtg agatgtctca gccctgctga gcttttctta
      121 tctcaacacg aggtatctgg agacgccctg ggctgctgaa ggattgggga gaagtagaag
      181 agcatcacac cagtgctcct ctacctccgc tcaagatgca gttttctcgg ggagagcaac
      241 cggtccctga ttgcccagac atcctcctca gctcctccac catcgggtcc aagtcctgtt
      301 gtgcacagag agagctacaa aaggcacctt ccccacagaa tgcctttctc tcccctccct
      361 cctgagatgc cgcctgcgag ggtctggtgc cgttttgaaa ccgaggttcc ccggggttaa
      421 aagccagcat cttaattcag agtgccaatg ttcaattttg ctttctgcca ccagactaga
      481 ttgcaggcca gcgagagagt ctgggttagt ggcccactgg gtcacctccc atttgttttc
      541 ctcaattttg tgttgtcata aattcattcc agcccgttgt ggttgatcag tttatctccg
      601 ccggggcagg gagcgctgca agcatgatat atggcacaga gcattgtagc cagcctctcc
      661 atgaatcact ccagctgttt ggtgtcagcc ccaaagcaaa caggacccgg ccgctgagcg
      721 ttgactacga tgagctcagt atgggaagag acatgacgta tgaatgttta tttaataatt
      781 ctctaatatt tccagcagag tgtggctgtg ccttctgggg agggag
//
LOCUS       KCKM01000814             766 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12866apa ultra-conserved element locus
            uce-7279, sequence.
ACCESSION   KCKM01000814
VERSION     KCKM01000814.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 766)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 766)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..766
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12866apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>766
                     /note="ultra-conserved element locus uce-7279"
BASE COUNT          143 a          201 c          248 g          174 t
ORIGIN      
        1 gagccctcct tcccttttat tgccacgatg tgaattaata cccatttcct gaagctttta
       61 tggtttcctc ccaaatggct cttacatcag ggggatattg ggttacagca aataccagca
      121 gcgagcaaag agcccaggct ctgcccactc ctaaatccac cattgctccc cccgactggt
      181 cccttccctg gagctggatg gatgctccgg gcagcaaatg gtcccattgg gatggtggga
      241 aacaccgagg accctcctga acctctgcag tgggagagtg gggctggctg agtccccggg
      301 gcgcagggat tgggggtggc ccccagtttc ggggtggttt cgaggtgcct ggtttggctg
      361 ccagggctcc tgccgccgtc tcgctctgag ctctcgcaca cctctcgggc tggttactgt
      421 agaaacgaaa ttagcacggg gagggaatgc aatcccagag ctaattaagg taattacagc
      481 ttcacaccag ctgctcacga ggtccaagga ccttctgtaa cttgtggagg ggatcagctg
      541 cttgggggga ctttgagctc cagcttccgg ggaccaggtg acttcggtgg gaagtgggac
      601 gagcactcgc caccaagggt gacaccaagc tgggggggaa gcatggcccc agatgtgcct
      661 cgcagatgtg ccgaccccat tgcagcagtg gggtgcaggc cagatttggg gtctgggttg
      721 agtctgggct ccttggggag ctgttttggg gggtgttggt gttggg
//
LOCUS       KCKM01000815            1085 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12882apa ultra-conserved element locus
            uce-5564, sequence.
ACCESSION   KCKM01000815
VERSION     KCKM01000815.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1085)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1085)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1085
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12882apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1085
                     /note="ultra-conserved element locus uce-5564"
BASE COUNT          281 a          250 c          262 g          292 t
ORIGIN      
        1 gacaaaaata ttagctggca ccaaagcctg tgctgcacaa attagatctt cttatcaaga
       61 gttagagaga tgaagaacca ttgctctctg cctgggaggc tggggtctgt gccttcacac
      121 atgctgttgc aagcagcatt gcctccttcc ctttggaaga ttgcgacaaa ctctggcctg
      181 atcctgttac tgctgaagtg aatgggaatt ttgccattga cttcaaggag atgagaagca
      241 ggccctctgc tagcaaatcc agtctttaga gtcctttcca gatactaaat aaaactgtgc
      301 ttggaagtaa tttggatgcc agcaagctgg cccagtttat cgtgaaattc aaagatgtcc
      361 aacaatgtga tgtttattag tatacaaata aagtatcttc tttgcggtgc aatgtgtgat
      421 ttccttccca atataaatat aaacttgcct tatgtgcaaa caattttctg tttttatgcc
      481 atcttactga caagaaactc ccagctgtta taatttgtct catccttctt tctcttgtag
      541 aaccagcctt tgttcctttt tgcagtgcca gggacttgct gagctccacc tgatgtgatt
      601 tgtccgggca ttaataatgc atcttcaaga tgtaagatgc atgaattcct tcagtaacag
      661 atctgctgtc agactgccac accgtattgt gccacttctc cgaggtgggg gaggcaagag
      721 gaccctcgag atgggagagg caagtgcaca ggcgtgcacg cacccacgcg ggtcataagg
      781 cttgggagcg aggggtgtcc tgtcattagg gggggtcact gcatcctcac actgaggtta
      841 ggctgaggat aacgaagatt acaggagctg gtcctccagc aggaaggtcc ttactcacca
      901 tccatggaat gaccgtggga tgacggactg acacggactt cagaagacct ggcaaatgct
      961 ccagtgttgc tccacgggcg agcatggtcc taaacataac caaaagcaaa ttaactttgc
     1021 ctccacgcac tcgtctaggt ccaccgtcag gacggcatgc attgaggagg atgtagctga
     1081 tttac
//
LOCUS       KCKM01000816             490 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12898apa ultra-conserved element locus
            uce-2057, sequence.
ACCESSION   KCKM01000816
VERSION     KCKM01000816.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 490)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 490)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12898apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>490
                     /note="ultra-conserved element locus uce-2057"
BASE COUNT          188 a           76 c           78 g          148 t
ORIGIN      
        1 gcgatgagca agactatttt attccttatc ggcttcataa ggaataaaat tttcctaaat
       61 atttgaagtg gatctgaaaa aaattcaaga caagtgtata aatatttagc tacaactttg
      121 gcaaaatcac aaaagtctac aattttataa ccacatacaa aacacattag ggaagaagga
      181 tctagaagtc aaaaggacaa ttttctggta caagaaacat agacttcaca gtagcctaag
      241 aatgcaatag tatacagtgc tagcaaaagt tgaaaaaatg ttgcagatca cacttgctta
      301 acaggaagct ctagcagtgg aagtatattt ttttcttttt tttaaccaac agacagtagc
      361 aattatttat tttctcctct gtcagtgtgc ttgttgaagg caagagaatt caatatcaaa
      421 gttacaattt ctaactacaa taagttacaa agttccattt cattaagatg aagtttaagc
      481 aatgataaac
//
LOCUS       KCKM01000817             762 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12913apa ultra-conserved element locus
            uce-3025, sequence.
ACCESSION   KCKM01000817
VERSION     KCKM01000817.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 762)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 762)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..762
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12913apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>762
                     /note="ultra-conserved element locus uce-3025"
BASE COUNT          240 a          163 c          192 g          167 t
ORIGIN      
        1 aaaaaaaaag agggaaaaaa gtgctaaatc aggcagatta caacaaggag attctgttgt
       61 gaggctgatc taacattcgg acacagttat taaagcacct ccgaaaagac gctactccaa
      121 aatcccgaat agttgtgaat aaaggaagag agtttggccc agtgcacagg tttgggcaca
      181 aaagtgcttg ctaagctatc tatttcacac atgcaacgac agaaggttcg atattcattc
      241 gatcgatgac tgaaaaggca caatggcaaa atcggacgga cttcttttca aatacagatc
      301 tccgatgtcc ccctacagtc tgcagtcgca cggctggtgg tgtggcacag acggagcaag
      361 ggttacatca aggctgttct ctggaccgtg caaacagtct agaccaatga cctgcagcat
      421 cgtgcccttt gaagaagagg caagttcggt cacgacgaag aaaaatcaag gcgtacccct
      481 tttaacaata gggagcagct cgtggctgca aagaggtaag caggggtaag caaaaaaggc
      541 atctgcttcc atggttacag gccaagcatg ggaaccttgc ttttgaggag ggacggttct
      601 caggctccct cgcaggctat gtcatgcatt ataagcaaag gcaggttgag ctgaaatccg
      661 cagagttatt tcagagtaaa atgatacgcg agcacatggc tcttagcaaa aaaaagtcac
      721 atgactgttt agaagcaggc ttgcactctt tccgaattga gc
//
LOCUS       KCKM01000818             843 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12929apa ultra-conserved element locus
            uce-625, sequence.
ACCESSION   KCKM01000818
VERSION     KCKM01000818.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 843)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 843)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..843
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12929apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>843
                     /note="ultra-conserved element locus uce-625"
BASE COUNT          241 a          162 c          164 g          276 t
ORIGIN      
        1 aaactgttac ttggagccac caatataaaa cttgagacaa tgaaataact tttaactgac
       61 ctaaatcagg cataaacaat agagcagctt gaaaggtttg gtctacaaga aatgtcacag
      121 tctatggaag aatgcttcct ctgtttgatc tgtcactagg cttctcaaaa catgacactc
      181 ctcgaacata atatactttg atgataaact agattaactt tcccagtaca aatgaaaggc
      241 cacctgttgc cagaatgccc atattccttg ttggctgtct tgtagctgtc atcacttcaa
      301 tgcaatctgc acccaacatg ctggaatata atgaatatgt caggagttgg aggtcagcca
      361 tcatagtaca tgaaaacttg gcttgcatac agtgtcagca tggaggcctc gcctatcatc
      421 ttgtgcaaag gatttctgca ccacttgatt tgtttgcaca gggcttgttt ctgttggatg
      481 gaacacattt actgagaggc tttttgacag cccattcaaa cattttcaat ttggaaaatg
      541 gtgcttcctg tttcaggctc tgtaactgat gggtggtgtg aaatgccact gtagctgatc
      601 acactttgtg tttattgtta ttattttaac atgaaaagat ccttgatgag cactgaagta
      661 ttctgatgag agaaaaggat atagcaggga tatagtgtat ccttcaaatc ctaccccttt
      721 tatgtacatt taataaaaca aagtttttta ctttttcttt attcagccct gctgaagatt
      781 ataggtctct ttggtggcct tgtaattttt ccagtgtaaa gattcctggc tcttatctat
      841 ggt
//
LOCUS       KCKM01000819             838 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12945apa ultra-conserved element locus
            uce-6714, sequence.
ACCESSION   KCKM01000819
VERSION     KCKM01000819.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 838)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 838)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..838
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12945apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>838
                     /note="ultra-conserved element locus uce-6714"
BASE COUNT          267 a          139 c          152 g          280 t
ORIGIN      
        1 ttccgggttt ttcaaatcac tgttgttgtt gttgttgtca ttgaagagaa tctgttgact
       61 gtagcatgtg ttttgctgta gtctcccaaa tcaggattgc ccttcttaag gtcaggggaa
      121 tgtatcttaa aacattcata tatttaaaaa atatgtattg ttattttaat aggcactgtg
      181 gatagtttaa tttgtatctg tattaaatta aacatatggt gaacagggta taatagattt
      241 tctataattt agctgccaat gtggcaacag aagccagtta ctctcaccag cagacttgtc
      301 agtggtttgt ttactagctt atttgaatta aaataaagct tcgcttctgc tgactgcaca
      361 tcattatcta tgagaccata atcctgctag caaatcctat atcttccaga actggctctt
      421 ttgtttggga ttactgagag cttagcctat aacaaagagg aataaggcat ccctctcatc
      481 ctcgtaatta agtgtgggga gtaatttaga aacaaaccca gaaagatgta caatttggag
      541 ttctgcttct atacaggatt ggggaacaga agaggccaaa cactgattat gttagcacaa
      601 tgtttaaact attaaactat ggtacaacag gaatccagct tttaaaaaga aatgacaact
      661 atcaataaag tattaagttg ctttacacta gaaacatttt ttgcttatct aaaggtatgc
      721 tggaaaactt gggtggagct taaaatctgt gtactatttt aaatcttgtt tttctacaca
      781 cacaggaaac atacatgtca cttttataac acctccacct caaaattaaa gagtgtaa
//
LOCUS       KCKM01000820             274 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12961apa ultra-conserved element locus
            uce-4930, sequence.
ACCESSION   KCKM01000820
VERSION     KCKM01000820.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 274)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 274)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12961apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>274
                     /note="ultra-conserved element locus uce-4930"
BASE COUNT           68 a           51 c           80 g           75 t
ORIGIN      
        1 gggcacgggc agcatggggt ggggggcctg gccaggaggg gtgtgggagc gggcaactga
       61 cagggaagat gaatggtttt aatcacaccg cttacagggc accatctgaa gtttcgtgta
      121 agttatgata gcgacagttt gcacgaaaat tgtatttcca ggcttcattg actggcttaa
      181 tgagaatctt tacgtgtcag atattaaatt aagaaattaa agagctgttt cggtgtgtat
      241 agactccttc ccttgcactg agctgcttct tcca
//
LOCUS       KCKM01000821             883 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 12990apa ultra-conserved element locus
            uce-6606, sequence.
ACCESSION   KCKM01000821
VERSION     KCKM01000821.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 883)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 883)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..883
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12990apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>883
                     /note="ultra-conserved element locus uce-6606"
BASE COUNT          192 a          321 c          177 g          193 t
ORIGIN      
        1 atgcaaccac tgattttgca aatgcagcaa cgcacaatgg caacccaggc attccccaga
       61 gcaagaaaca gctatctttt tttggttgtg cttcctccat ttcacaggca cttttctccc
      121 tccgtgttgg tgtgtgtgca ggcatttatt cccaatcttc ccctccccca aagccaaact
      181 gatacatctc cgctcttgca aagctggtct caatgcacaa atccagccct cgccgctcac
      241 ccccttgctc gctctcacac ataggcacac acgcacacat tttgcctttc caagcaaagg
      301 aatgggtcag ttccccatct gtacccactt gccagggaac acgactcccg aacggccccg
      361 agctcttgca ctcacctatc tggatattgt tggggaaatt ggcccctaac accgccccta
      421 ggaaactggt gcagaagaag gcaaaaatgt gctgcatatt cccttttgca ttggcgaaaa
      481 agaagcccag ttccaagcat agatttgatt tttcccccgc tctgctctct ttagctgccg
      541 cctctctcgc ctcccctccg ctgcgccttc aggattgcgc gtccccctcg ctcggaatcc
      601 agcgccgaga ctgctgctca acaccgcctg gcagcaggat tatctgagcc ccgggagaaa
      661 gaaagaaaga gagcccgctc ctcatccaca tccctccccc gccacacacc acacacacac
      721 gcacgcacac accaaggcgc tgccgcccag ctccttcccc ttctcccagt tggagctcaa
      781 cagctgggga ccgcatcccc cccatcgcct gttcaccaac cctgccccgg gggtcctggc
      841 tggggtctcc aagggcaatt cccaccccct cctaaattct tgg
//
LOCUS       KCKM01000822             928 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13006apa ultra-conserved element locus
            uce-2734, sequence.
ACCESSION   KCKM01000822
VERSION     KCKM01000822.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 928)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 928)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..928
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13006apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>928
                     /note="ultra-conserved element locus uce-2734"
BASE COUNT          239 a          262 c          181 g          246 t
ORIGIN      
        1 gggagccccc accacacctg gcatccaggg agcctcatca ctaccggact tcccccctcc
       61 ccccatacac aagcctgaat taatttatct ttaattctgt acaaaatcag cgtatgctct
      121 catgcagata ttaccagctg acataggaac agaaaggtaa tatcctggac atttgtttct
      181 gtaacttgat catataaaca gggatattat ttctaaactt aaaaaaaccc aaccaccaac
      241 ccacaaaaaa ccagccacaa acaacaaaaa aatcaatgca attttctatt tgttcctatc
      301 agagaagaaa aggccttggc ctcatccaca gcaagctttg ctccctgtaa ggcactgcag
      361 cctctgcctt ccctcccttc ttccaggggt ataaattaat atctcatcat tgaccataat
      421 atgccctgta actgtgttta ttattactgc gtattttaga caggtggtaa gtattggcac
      481 tttttattat gctgataaac aatgtcaggc tgccaggtga aatgtgttgt tggggtgatt
      541 tctcacctcc ctgcagcctg ctgtggctct ctgaaggagt gagcagcccc agccaggctg
      601 tctcctgcag cctctgctcc tctctcctgt ggacatcagc cgaggaccat cacccacctg
      661 cgatccaagg aaggtaaagt cacagcaacg cgtagatctt agaaaactgg gcacaaacgt
      721 aggcatcttc cctttcctct cgtccttgct gcattcccaa gcactgctgc tctctcagat
      781 ccccttcctt taccctgcag cagcaccggg gtgctggtct ctaccctcct gaactgctcc
      841 tgcttgcgag gcctggagtg ggaactggtg cgatgtggcc aggagatata tttggcaatt
      901 tattgaaaat tccttaggtg cacacccc
//
LOCUS       KCKM01000823            1110 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13022apa ultra-conserved element locus
            uce-1754, sequence.
ACCESSION   KCKM01000823
VERSION     KCKM01000823.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1110)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1110)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1110
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13022apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1110
                     /note="ultra-conserved element locus uce-1754"
BASE COUNT          359 a          242 c          180 g          329 t
ORIGIN      
        1 caggcccagg cttttctctc tcatcaaatc ccttccctca ggcatcaaac tgttctttcc
       61 tcacagacat actgacgcac tcaagaatca cattctgtct gcacatatat ttaattatta
      121 taacacatac aacatttact ttattagtta tttgtagata aaacacgaac actaagccaa
      181 taaaagaaaa tatctgaaag aataaacaaa aggagatgct tgcaggcaat cttagctaat
      241 gaaaacaacc atcttctccc aacatgcttg tatttgtgac cagggtcttc ctgctgtaca
      301 acctgtattt tacttcactt actaggacag gtggaacccc agaggaacac cccacttcta
      361 tttcctgaac cattggtgtc agatatgttt caggtatgat gcagtagaac tgaaaagcag
      421 cagaagaaag tcttctctgc tgtgctacta cacacatcag acatctctaa ttagacagca
      481 acaaaatttt attaataggc tggacattat ggaatgagct tgttataaat gggccctgtc
      541 aaagccttat tcagctacca aatgagtatt ctcagttcac tgctcgcatc tgaagcatca
      601 ccgctggtgc cggataacaa atgattgcta ttaaccgtat tgttagtaat gatggctgaa
      661 aacaaacaaa aacccataaa taacagtcta cagaaaaatt aacccataaa cttgatagat
      721 atccagctga gaaataataa atgacacttt ggatcctgct gggagaagct agtggttttt
      781 gttttcttct ctgtcattaa cacattttct gtgctaaaaa ttagattctg atatataatt
      841 atcaacgctt ccagatatta attctgctat cgctccctct gtttctctgc tggttgggtg
      901 taatgttatt cacagattac tctgagaaaa cacatcaaac acttaacaga gcaggtcaaa
      961 gtgacaagca gcttttgctg acaacaccaa cctgcgcagt cttttttacc agggacacaa
     1021 aacaaatttc tcatattaat taactccagt ttctttgcag ctagaacaaa tcttcactat
     1081 gtaatgtgag ctaagcagat tcctggctgt
//
LOCUS       KCKM01000824             599 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13037apa ultra-conserved element locus
            uce-959, sequence.
ACCESSION   KCKM01000824
VERSION     KCKM01000824.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 599)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 599)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..599
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13037apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>599
                     /note="ultra-conserved element locus uce-959"
BASE COUNT          201 a          118 c          102 g          178 t
ORIGIN      
        1 ttaaaaggaa gtaatatgac atcccattta atttcctccg aaacaagaca atctggctta
       61 ccaaatatag cctgacaaag aaaaacagaa atttcctgat caaagatcca agagtgcagt
      121 gctccacctt aaatccctcc cacctattag gccccccttt agacaagaca gagaaacaaa
      181 tttctcacac atcaatgatg cctccataat caatttcaaa tagccccttg catagggatg
      241 caaatcttgg ctttctctta ataaagcatt ttagaagatg gatgtactga tctgatatta
      301 ttaaacgaaa agtggtctct ttttaatcta gagatgcagg ggcgttagta acagagtgaa
      361 tcaaaggcct ggtctctttc tcttcctaat tatcaatagt gttttataat cttattaata
      421 ttgatacaca gtatactgaa gatctgttaa cgtataatgt atgtggagga taattaacga
      481 gatccgagtc agatcaatcg cctatttgac agcaaacggt gtgtggctta taaattatac
      541 atatgctagg tatggctaga aatgtttaaa gtttcagtcc aatccttcca gtacagcac
//
LOCUS       KCKM01000825             688 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13053apa ultra-conserved element locus
            uce-1912, sequence.
ACCESSION   KCKM01000825
VERSION     KCKM01000825.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 688)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 688)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..688
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13053apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>688
                     /note="ultra-conserved element locus uce-1912"
BASE COUNT          257 a          107 c          138 g          186 t
ORIGIN      
        1 tttaagaaaa gggcatgatc tcaagtgaac atctttaact atcagagcat aagtgcacag
       61 aatgacagtt acaaataatt ttatacaaca gacagacaaa ttgtgctgat tgtctatatt
      121 taaaagaaaa aaaaaggaaa agaagcctag cctagaagac tacagtaaat cacgaaagtg
      181 atctcaagtg aacagagata gatttctgga atacggtgtg caatgaaacc actgacctct
      241 tatacaaggg ttcatgtctt tttctacaga aacagatggg taatagcata atgctgaaat
      301 catgctctac ataatatgga cctagtgatt gcagacctga ttgcttgcca tatggttgct
      361 gaagggttga aaagaaaatg ggatgatatg caaaccctta aaagcaacat ttttattgaa
      421 tggccattac attaaaaccc aaactctgca aatgaaggga agaactgtgg tgaataatga
      481 tgaaataaca aaacaataaa agaaacacaa tagcatgtat ttgttttcaa tatgcaaaat
      541 aatactcttt tttttgtcat tttgccttgt gttatgagca ttcggtggaa agttggtggg
      601 acattgctgc ctgcagggca caagtacagt atagcagagc attgcagtat tcgctaggtc
      661 agacagaaaa agaaaataat cacttgtc
//
LOCUS       KCKM01000826             347 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13068apa ultra-conserved element locus
            uce-6263, sequence.
ACCESSION   KCKM01000826
VERSION     KCKM01000826.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 347)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 347)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13068apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>347
                     /note="ultra-conserved element locus uce-6263"
BASE COUNT          130 a           65 c           55 g           97 t
ORIGIN      
        1 ggttacccag atggtttata tattactata ataattttgt tcatagaaac tctcacaaag
       61 aaaataatta atcataaaca tactgtgatc cccctaaagc agtgactgtt ttaagttgaa
      121 atcccataat ggctatgacc tctaaccctg atgtaactgt ttctatccta gctactaaag
      181 tggttgctca tgaaaggcca tcaaatacag aagtaaatgc aaaggttaac aaagttagtg
      241 gaccaaacaa acttgatact gagaatgaac tttcacatgt agcaagaaaa taaacaccat
      301 tctcccagac tgatctacac aggaggtttg agatgccaaa atattaa
//
LOCUS       KCKM01000827             314 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13084apa ultra-conserved element locus
            uce-6640, sequence.
ACCESSION   KCKM01000827
VERSION     KCKM01000827.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 314)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 314)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13084apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>314
                     /note="ultra-conserved element locus uce-6640"
BASE COUNT           98 a           61 c           46 g          109 t
ORIGIN      
        1 ttggacttac tgtgctttcc ttttcagaaa acagaattct ttttaattaa aaacacttta
       61 aaaaaatcag tatgtgtaat tgctaacacc tgctatgtgt tactaacaga tgtttcttac
      121 ttacctaagg gaactgttat aattacacta taagcttatt ggaatggcat ttaaccaaga
      181 tagtttagga actttaggtg gtgactttgt gttcttttat taatctttcc tccaaaaaaa
      241 taaaattcaa aaaagcccta gcccttcttg ctcacctccc cagctcatgt tcatggaacc
      301 cagctcatta ggag
//
LOCUS       KCKM01000828             592 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13098apa ultra-conserved element locus
            uce-3439, sequence.
ACCESSION   KCKM01000828
VERSION     KCKM01000828.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 592)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 592)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..592
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13098apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>592
                     /note="ultra-conserved element locus uce-3439"
BASE COUNT          188 a          124 c           84 g          196 t
ORIGIN      
        1 aaacatacaa atctgtctga cctcccctac ctttagatac ctgctgctgt tggcaccttt
       61 gaaacctttt tcccttcccc ccttagtgga ctataacact tctgatctca tttccttctt
      121 ataattgctg agcacacacc cagtttaata catgaacttg tacccttcat attgtcagaa
      181 gaactatcag aatacttaca ctaaatcctt gtacatttta ccttatttta ctaaaggatt
      241 acatatctgt cctattcact tataaaacat gtcttttaat gatgtacttt tagaaaagtc
      301 taattaaaat tcaatgcata aaagtgtgca agggttgata acccacagaa ctcagcagac
      361 cctagttaac attctaatgc atcctccatt tggagagaga cagtaagact tttccacctc
      421 ggtggcagac actaatgata cttgcaaata tgactaatgt cttcattggt gaaaaattaa
      481 tgcaccacaa taatttttct acctggggtt aatgaacatg tcagatgctg aaaatgagtt
      541 gtttgaaagt aaattactat aatctatatt tagaagactt tgctcttgga aa
//
LOCUS       KCKM01000829             951 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13112apa ultra-conserved element locus
            uce-5860, sequence.
ACCESSION   KCKM01000829
VERSION     KCKM01000829.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 951)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 951)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..951
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13112apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>951
                     /note="ultra-conserved element locus uce-5860"
BASE COUNT          314 a          192 c          212 g          233 t
ORIGIN      
        1 gaaggcacaa actggctgac gcaggtcagt ttgcaggtga cgcagcacgc ggcacacgga
       61 gccaatccca tcatgaaagc agcgcaaaga aatgggtttg ctttagaatg aaccgagcta
      121 acactttaaa gcacatttct gaagatggaa cattttcaga aatagtgcaa aaaggaagta
      181 tgcgtaacaa acacacgcgc tggcaccctg taacttaaaa cgcttatctt ttatagcaaa
      241 tacaggagca aagaaaaacc gcaaacgacc tggaaattgt agaataccaa ggaatgggca
      301 agaaagcaca gactcaagca tgccactaac gaagcctttg cagagtcaca gaatgtcata
      361 cggcacagat gagtcacgca gcagctgacc tgataggtgg aattagttgg caagtgctgc
      421 agtaattgtg cgattgtgta atttcgaata ctagccaact tagcctgatg tctccttaat
      481 cgaatgagaa gcaatgttag ctcttcaggc tgcaggtatt cagacattgt aaagaggaaa
      541 ttagcagtct ttcgggagag taactgtaat tacatttttc acctcagtgc ccagaaacca
      601 gttacttgac atgattaagc aattatttca ttaactttgc gtttggtcag acaaacataa
      661 taaaagttga atcttgtaat aacatgcagc tcacccctgt gtacgttgca ggtaagagca
      721 aaatccctac aggctttact gggagctggt taagactaag ttcttattca agttatttaa
      781 gctttaacta ataaaaatac aactactgtg gaatgagcag gattttaaag cttttaacgc
      841 tatgatgaca cgaaaggaaa aataactgct tgcccaactt accgacttgc catgcaaact
      901 gggagcgctc acggtatgtg tcatgtagcc catggtaggc atagagcgtc g
//
LOCUS       KCKM01000830             641 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13127apa ultra-conserved element locus
            uce-5974, sequence.
ACCESSION   KCKM01000830
VERSION     KCKM01000830.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 641)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 641)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..641
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13127apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>641
                     /note="ultra-conserved element locus uce-5974"
BASE COUNT          200 a          121 c          124 g          196 t
ORIGIN      
        1 tattacacag caatgaacaa gctgcatttc catacagttt taagttttta aattaaggtc
       61 ctgctgattt aatgcctttt ccaaatgtat acgcttaatt tcctgtacaa tgtcattagc
      121 agcacaatga cacattttct attcatctaa tcaggaagcc ctttgttaac aaagatcaaa
      181 actgtggcat taggtttgca atatcccttt tttttggaga tgttgcgatt actgtggacc
      241 aactacggca aaaatctatt tttttttttc cactgcaaat gctgagacat gaaaatacag
      301 acttgcatat acataacacg tacatagtat tgcagtgtgc catactgaac tgttaggata
      361 gtatatggta aatgtaaact ttcacagcat tagttatcat accgcataga gtagttttgg
      421 cccagtgaca ccagtaggaa aaatgatgtc cttgttcagc tcatcatatg ggcaccttaa
      481 atctaggtga ggacaaatgg ggaggtgatg tgcatgtaca ggcagggaac ttattgcttg
      541 acacggatca acagagcact taggaaacca gtgcagtggg aaatcaatat gactcagggc
      601 cagctcttac tttgtgctct tttgccaatg ccaaaaaaaa a
//
LOCUS       KCKM01000831            1160 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13142apa ultra-conserved element locus
            uce-6703, sequence.
ACCESSION   KCKM01000831
VERSION     KCKM01000831.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1160)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1160)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1160
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13142apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1160
                     /note="ultra-conserved element locus uce-6703"
BASE COUNT          385 a          225 c          180 g          370 t
ORIGIN      
        1 agacaaaatg cagtgcatca aattatctga cacactacct tacatcaaaa tattgccttt
       61 gttttatgat gcttttaatg caaattgata tggtatatga cacaggactt gtgttgcccc
      121 acaacaaggt gggatgcaac tcagtgtata actcaagtgc acacttagat gatgctggta
      181 ctggcttgaa gagcaacttc cttaaacttc agcaagtttc ctgcaaagtt aacaaccact
      241 tgctaatgac acaggagaga ggaatacaca agacgaaaca aatatcagcc cacagcatgc
      301 tacttttctg gtaatattta ttaaacatta tatttgtttc aaaggcgtac actggacgaa
      361 catccaaatc atttcaaagc ttcaaggata atttttgtgt tatattttaa caatgtattt
      421 tatcactata gctcgcttta aatttacttc aaatattaaa cagacgctgg ctatagtagt
      481 tagctgaatt gtttctggga tcaaaatcaa actaaacgtt cagaaaattt tcagcaagag
      541 attccagtta atgaaagcac catttgtgat gtgctaaaac atgtatacac ataggtattg
      601 ccccatttat cagacgtgag agctaattac ctcatccact gctatatttc ttccatcctc
      661 tgcatttcaa ttcccaatat taacacatag gtggtcaagc tgaccatcga atagcctaca
      721 tgagcatgaa tgcattaaat aatttaatgt tagaagagtt tattaaactg ccacattcta
      781 atcagcatgc gtacctgcct tcattaatct tgcactggtc catggtgtgt ctccacagcc
      841 aacatagagt gtgctaatgt taataggagc tcttaacaaa caggatcagt taatcaagga
      901 aaatttacta ttagccacat gaccatgcat actgaaatct aattacaatc agatttaacc
      961 tcttcattac tgtattcatc caaatatttt tgttaccact tgtgatacta aagtattcca
     1021 cactgcaaca tgattatact tatttgaaca ggagatactt acatcaactc acttttctta
     1081 agaagggaga ctttcttttt gctttgtttt caatgtataa tgttatatga gttatatata
     1141 ttgccaaaag caagaaacct
//
LOCUS       KCKM01000832            1183 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13157apa ultra-conserved element locus
            uce-6528, sequence.
ACCESSION   KCKM01000832
VERSION     KCKM01000832.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1183)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1183)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1183
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13157apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1183
                     /note="ultra-conserved element locus uce-6528"
BASE COUNT          348 a          231 c          246 g          358 t
ORIGIN      
        1 ttgaagtttt caggttttca gtgaactctg tatcactgct attagatata ttctaagggg
       61 cctttgtgct tcgtagtgtc agacttgact agatggatac atggagtgtc cctgcttaga
      121 agaaggaacc tgaacaattg caaatatgac ttgcattaat tctatgccag ctaaaaaata
      181 gccatttagc ctcaaaagaa gaacattttc actacctcca gataataatt tttttaaaaa
      241 ttaatgaaaa gcaggttatt ctttctcctc cttagagaca gacttcttgc aagttgaact
      301 gtggcttgaa agatttgaat ggccctttga cagcatcgct ccctaggtag atacagaagt
      361 caaattgcaa agtgggtttt tagaaagcaa acacaaaaga acaactcact atagcggtga
      421 gcttttctgt ttgttcccca tctccagata acagtggact caaattattg tgatgtgttg
      481 attgattaca gccgttaagt ttcttagtaa tcagtttcat cacttattct caattcacgc
      541 ttgcaccttt gatttctctt ccacaacagg gtgatgtggg ttgtcgttga ctaatgaaga
      601 acagaattgg tttcggcgtg agacaaacgg aatgccgaca ccaatcccaa aatgcattaa
      661 tctttaataa tccacatctg catgtttata aatgatataa ccaggggttg ctaacgtaga
      721 tactccccct tccatacaga agctgacata gaagttggcg tttgcaaact gcatgagagg
      781 cacgtggccg cgcgtggtgt gtgtgacctt gtggagggag cttgccagat gaaagttctc
      841 agttgattaa aaatacatga agaattgctc cgctcctgca ctggtctttg gagcttattg
      901 tcgtcgggca agatgaaata tggcatgata gatcttgtct tcaggaagat cagacccacc
      961 aaatggtttt tggaagtggg tttgcctcaa ggggctttta tcctttatgc attcaacttg
     1021 cccttttctt ctccatctct gagaaccatt gagaccaggg ctgcataata tgccatgtaa
     1081 cgcaataaga aaaactagat aagaatttgt tccttttgag aatggtatca atgagaacac
     1141 atacattttg gtgctaaaac acccaataat cgcaagcaat gga
//
LOCUS       KCKM01000833             574 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13173apa ultra-conserved element locus
            uce-3200, sequence.
ACCESSION   KCKM01000833
VERSION     KCKM01000833.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 574)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 574)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..574
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13173apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>574
                     /note="ultra-conserved element locus uce-3200"
BASE COUNT          183 a           95 c          100 g          196 t
ORIGIN      
        1 ctggaggtat ctctcttgct aatatatatt tttcagttta ttcttctaag tcttttaaag
       61 atttcttgaa aagataataa tgatccattt tacttaccta tcaagagctt tgaactgaag
      121 gcttttttcc tgagtatata gttaaagcat taagggcagt atggttagaa caaccaatca
      181 gagtaatgag tctccactgc ttgagaaagt gagattaatc taaatcaaat actttccact
      241 atggcaattt taactaattc cctcatgaaa gtataagaga tatgtgaaac ccctacagtc
      301 agcataaacc tcctggtagg gctagacagg taatatcttt taagcttgtt aatgtcttat
      361 cctgctggtt tctacaactg actcaaagaa tagctgagta cttctcaacc tgtcattaca
      421 gagtaaagaa actttcagca tggagataga aagggtgatg ctatgtttca taaatcatag
      481 cttgatagta ctgttatagc tagtgctgtt tggactgatt taattaatgc ccttagtttt
      541 ccaaatgcat ttgtaacatg tagacagaaa tatt
//
LOCUS       KCKM01000834             866 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13189apa ultra-conserved element locus
            uce-2222, sequence.
ACCESSION   KCKM01000834
VERSION     KCKM01000834.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 866)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 866)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..866
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13189apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>866
                     /note="ultra-conserved element locus uce-2222"
BASE COUNT          266 a          191 c          176 g          233 t
ORIGIN      
        1 aagtgggaat acactgacgt agaacctgca cctttgcttg tcttactgtg gaaatgtaat
       61 acaaaaagga ccaatgagtc ttactgggct ctctatcggg cttctgcaag gaaagaaaaa
      121 ccagttgttg gcccgacact gcaaaaagct gagtgccctc cactgtcaaa tcaacgagca
      181 tttgggcgtg ctcttcacct ttcgggaacg gcccctctgc attacaaaac tgtttaacag
      241 caaaggtaac gtgacaatct cttatgcaac atttatttta cacacagaaa tacaaacaca
      301 catacaaaca aaaagtgtat tttttttttc gtttttgtat ttttttacct aaatgcaaac
      361 tggatgagga tccatgtgat gaaagtgatg gcggtggcgt aagtgaatgt cctggcgttt
      421 ggcttggcag aggcatgcct attggacttg gagaggagga aaatcccaga ctattgtaaa
      481 aaggctgccc tatgggtgct aggctgctac tagatctttt gtacaagtca gagctagtag
      541 atagagaatc tctccttgtg gcactactac ttgcagaact gccaactgaa gaagaaataa
      601 aaagacccta attacacagt gtcaactgaa tgaaacctat ccccaactac agctgggcaa
      661 taacagatgc gatcacaaca attacagcaa tcgttatgac aaagacaatt actgtgataa
      721 ccacacatgc ttttaagtaa atctaagtgg gtacaaacat acccctggta agtcatttca
      781 ccaatgccca cgtctttcaa catttcattc tagacttctc acagtaatac cgccttcgtt
      841 ttaaccgcct ggcttcaggc tttggg
//
LOCUS       KCKM01000835            1064 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13204apa ultra-conserved element locus
            uce-2070, sequence.
ACCESSION   KCKM01000835
VERSION     KCKM01000835.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1064)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1064)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1064
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13204apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1064
                     /note="ultra-conserved element locus uce-2070"
BASE COUNT          326 a          217 c          164 g          357 t
ORIGIN      
        1 cgtggcagac tttgatacaa ttacagcttg gctacgtatc ttaatttatg ttacaatatt
       61 gctgtagtga tagcagagac aaatgtttaa ttcacagaac gtcagtttta aactacagtc
      121 cctgaatgca aacggcagac ttcaatattt tttcatcaat ttcttagttc ataaaaatca
      181 atttttgtag agtttttaca ctgtacataa aagactgtgg catcaattag ccttaattct
      241 ttttttttct cttttttgga aacctctttg taggaaaatc tcatatttca gcaatttgca
      301 ttatccacac aatctgcttt gaagttctaa gttatggtaa gaaaaggatc cacttatctg
      361 cacataaaaa atgttcaaag cttataaatt ccctgaaaca gatgtacatt atcattggat
      421 ttgcctttct ctctttgctg ttgcatggct aatagagttt catgtgcccc ctcacatcct
      481 ccccatttag catcttttct ctacagaagc atgcacccta ctgtgccaat ccacacttca
      541 aagatttctg tctatctatt agaaacaaag cacaaagtga gaacatatgg ccccttttaa
      601 atttcccaca tttaagtcaa tatcgtttct tttctccttt ggcaaagaaa cataataagg
      661 tttatcttct cccttcctaa atctgctggc tctctcaaac tgcttgtgcc aattcagcag
      721 ttactttgca gtatcagact tggcagcaca tatgaaaaca aaatctctaa ttttttaaat
      781 tgcttttatt tcttcagatc aagaagatgc atttaaatga tgaaaaagga caaaatgtaa
      841 ctgcacactt tcagataagt ggattttaaa cccatgaaag ggcacagcag agtcaacagc
      901 aaaaaattgt cttgttcaag ttcttttcat ggtgaaatct ttccaaatgt ttactatcct
      961 tactaaaggg atggaagagc actttggaat ctaaagcctt actgagtagg agcatctgct
     1021 tgtcccatat cccagagcat ctgcagaaac ccagtgtact gggt
//
LOCUS       KCKM01000836            1049 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13219apa ultra-conserved element locus
            uce-290, sequence.
ACCESSION   KCKM01000836
VERSION     KCKM01000836.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1049)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1049)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1049
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13219apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1049
                     /note="ultra-conserved element locus uce-290"
BASE COUNT          292 a          180 c          233 g          344 t
ORIGIN      
        1 atgaagtttc acttgtcatt atactcagta agataaagtt agtaaaatag aagcttaatc
       61 atcttctagt cacagaagac cggtccatca gaaaattcca cttttctcag atgaaagatg
      121 aatttaataa tctagctgcg tgaacaaacg agcaggttag gcatggaaaa agctaccaaa
      181 gctgcagtcg atgaaggtga taggcctggg accaccactg ctggctttat tctagttgtt
      241 ggccttgggg acatgacaga tcttttgctt ggtttgatgc aggaaaaata atgaagaagg
      301 tacctcttat aaggcatgga gctcctttac taaccctttt aattattatt taaagattaa
      361 agttatggag ttggagagta ttttgctgtt ttataattta gcagttcagg ctgaagtttc
      421 ctttatgttc tttctgtttt catgcaggca gcctagaaga tggacatttg acaggccaca
      481 atagactgct cctttcccag gtatctcctg cttgtttcct ttatctgtga ataggaaatg
      541 gcttaaaggc acctgtgtta tgaaggtccc aggggcagct gcctggctag tgaatgcctg
      601 attatgtgtt aacatgcttt gtcagatatt ggcagaatct gttctcttct tttgcctttt
      661 cagcaagggt accattgaca gactggctac ccatttatag aaatgttgtc catcaaactg
      721 tgaggaagga caatggtgtt tttctgtggc cagtgactgt gggaaacttt tctttggcta
      781 ttcaggcaat ttttgtagct tgctctgaag aggagagact gatgagtgca aaaagtacaa
      841 ttaagcaaag ccagacttca attgaaggct gtagtgtagt ctgctgttct cattttttta
      901 tttggaaaaa aatctatggg ttttcacgtt gctgtgtggc attcagcggg gggctattac
      961 aatcctaaat tttttttcta gaccacctaa ttctaagtaa aaattaaatg taatgagagc
     1021 cacttggagt tctgaatatt ttaaagcat
//
LOCUS       KCKM01000837             654 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13234apa ultra-conserved element locus
            uce-6499, sequence.
ACCESSION   KCKM01000837
VERSION     KCKM01000837.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 654)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 654)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..654
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13234apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>654
                     /note="ultra-conserved element locus uce-6499"
BASE COUNT          203 a          136 c          117 g          198 t
ORIGIN      
        1 ttgaccttgc agctatagtt tctaattaag tgaagttagt cagtgagctc ttatttatct
       61 aacattgcat ttcccttgtg gtggctgctc aactcactac ccagccttgt tggttgttgt
      121 aactaaaaac ttgctttaat atactccaca gcacctagaa caagaagcat acacactgta
      181 tatccgtcat ttccatgtcg atgaggagaa aacaaaggga taattataaa ctgcatctct
      241 tattgttact cttacactcg acatgtgcat ctattttttt ttttccacag taaagtgatt
      301 ctgctgtgga gatagcacca ggtgcatggg ggtgacctca cacacacacc aaatcgggag
      361 ctgacatcca tcacactttg aaattttgga tttcatcatt tcctgatctt tctaaaggga
      421 tcacagcacc tggccctcac agctgtagtt catttagaaa gcaatttaaa aaccgagaaa
      481 aaagcaaatg acatcttgct gcctcagcct tgtcattaag tatagcagaa tggccttcat
      541 ttatgagaca catggctaag aattaatatc tttcagtgct ttctcaagtc gagattacaa
      601 aaggtttgaa agaccactaa ataattagta gtatgactga ggcaagcaaa aaaa
//
LOCUS       KCKM01000838             937 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13249apa ultra-conserved element locus
            uce-2252, sequence.
ACCESSION   KCKM01000838
VERSION     KCKM01000838.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 937)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 937)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..937
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13249apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>937
                     /note="ultra-conserved element locus uce-2252"
BASE COUNT          250 a          192 c          155 g          340 t
ORIGIN      
        1 tccctcttcc aaaaaaatct actctcaaac aagattttgg ttattcaaaa ttcgcaactg
       61 aggctggtta gaagctcagt tctaagtttt gaagtggttc aaaaattgta ttgtaacagt
      121 tcaaacatta ttatatgctg agtgtaattt atacctaaac cccaaacaaa tttaaaaaaa
      181 aaagaaaaaa aaaaaacaac tttggtgcct ttttaacaat attttctctt ttccttctct
      241 tcccatcacc tttttgcttt tatttcatgt gtttggttgt ggctattcct ttcgttctcc
      301 tcctcatccc acctctgcct atccacatcc accatttcat ttcacctgta catccttagc
      361 atggcaaggc actgacctga tgcataatca cgtcttggct gatgatgacc aatcaagtct
      421 agactccttg ggtcgtcgca gtagtctttc tcgtttggag ccttcagacc tctcagaaga
      481 ctctgactat gacagtatat ggacagccca tagttacaga atggggtcta catctcgtaa
      541 gagctgttgc tcatatatct ctcaccagaa ctaatgcact tctgagcttt ttcttaacaa
      601 atgcttgttg tatcacagcc tgcttttctt agatgttttc ttgctgttcc ttgtctcttt
      661 aatgtgatat tttaacaact tctgagggag cttctgaaac ttgagttata cctggtggaa
      721 ggctctattg ccaattcaat acacgtacaa ataagtcatt tgaaaaagtg tatatcctgt
      781 taaggatgat atttcttgag gatttttttt aactgacaga tgttaatttg tagctctgaa
      841 tggtctcttt ggtcagtgta gcaataggtc ctttttttat tttggataca gcacattttt
      901 gtattttgta ctgaaactat actggttttg agtgcca
//
LOCUS       KCKM01000839             549 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13264apa ultra-conserved element locus
            uce-5761, sequence.
ACCESSION   KCKM01000839
VERSION     KCKM01000839.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 549)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 549)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13264apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>549
                     /note="ultra-conserved element locus uce-5761"
BASE COUNT          207 a           96 c           91 g          155 t
ORIGIN      
        1 agtagtagca tctaaatact ttgagaatga aaagatggca aatgatttta ctcaattgtt
       61 ctttataact ttcaccctat gacattaaac atatgctctt tttgaaaata gtcattaacc
      121 tttcacatga tgtataacta gctttatcac tctggaaaaa aaaatccact ctgaattcta
      181 aaaagatgat ccactgggag acacacaaat ggtaaaccat accgaaggac acaaaaaggc
      241 ccacaaaata tcagtagggt tataaaggtc tatggatttt aattgctgtg tgccattggg
      301 cctttacaaa gcaatcaagc aggcaatctc tgaagacagc cctgccataa tacatttaac
      361 aatagagttc tcaccccatc agcagactag ggtttatgaa ggtcccaata gcaattaatg
      421 accttgtaca ttgagagaaa aagacaaaat tacttaaatt aactaccctt tttggataca
      481 tatcttaagt gttagaaagt gtaatttcag gacaaggaat gcaaaagttt gaatgatgat
      541 agataaaaa
//
LOCUS       KCKM01000840             730 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13279apa ultra-conserved element locus
            uce-4044, sequence.
ACCESSION   KCKM01000840
VERSION     KCKM01000840.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 730)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 730)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..730
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13279apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>730
                     /note="ultra-conserved element locus uce-4044"
BASE COUNT          172 a          174 c          179 g          205 t
ORIGIN      
        1 caaactcaga gagtaacatt gaatggatgt ggatacaacc ctcacccaac aaagcccttg
       61 gaaggttcag agggttcagt cccggcttgc cccagccacc ccagcacccc acggatgccg
      121 ccccaccctc cactcccatt gatcgtggca aaaaaacttt ttgccgtcgt atcgcaggac
      181 gcgataatct cccgtatcct gtcgctgtaa cccagaagcc acctcctcca aatgttttac
      241 gtattcccta aatttgtttg cgagggggca ggagagcaga taacggtggc gagtggagcc
      301 gagtgggaac tgctgactga caaagtgtgt agtgcagtac gggtgctttc tggctctcta
      361 attatccttt tccttcttga ctccagtatc acatgtagcc atgtgtagaa tcataaaata
      421 attatgcagt gtacaagctt tctgggagca tgtaccactg ttttcctaat tctttatcgc
      481 tcccattgat cgtggcgtgt gtgcattgat ccaagtcggc catctggttg gggaagataa
      541 gcgtgcgagt gtctttgcat tgcactgtca ctcagggagg ggggtacatt ttggctgtag
      601 ggaattacag gggcaggatt agccctcttc ctaggagtaa actgaatttt aaatgtagtg
      661 ttgcagctgc atggaccatg tttctaactt ctggttttgc ccatagactg ggtagattat
      721 tattattatt
//
LOCUS       KCKM01000841             610 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13294apa ultra-conserved element locus
            uce-750, sequence.
ACCESSION   KCKM01000841
VERSION     KCKM01000841.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 610)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 610)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..610
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13294apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>610
                     /note="ultra-conserved element locus uce-750"
BASE COUNT          209 a           92 c           89 g          220 t
ORIGIN      
        1 tattttgtgg cttaaagtat aatggtataa agataactat ttcagttagt tttgtatttc
       61 tgcttttcca ggcaccaatc tcaaattgcc tttttcatgc cagacaatat cattttaatt
      121 gtaactgtag atttaagata acattatttc ttcagcatgg ttcctatata catgcatctt
      181 ttgaatcaat acaattaagc ttgtctcctg ttggaattct tgtaattatt tttcctgaaa
      241 tacttttcct gtaatgatat tgaagttaaa gtaatcaggt tactggcaga tcatgtaaaa
      301 ttcaactcaa aattgctggc tgcttgattt taatttgtct gacatcaagt ttgtttgaaa
      361 agggataata tgtggttaaa ccaaggagct tataattatg gttgacattt gtttgtttat
      421 aatgaaatct aattaaagtt catacatttt aaaacacaaa agttaattac tgaattgctc
      481 acttcactta tgcacagcag ccaaattaac ttgcagagca aaaaaaatga caaaagacta
      541 tgcataataa aaacaaaatg cccagctgat cttggcaata caaaacaaat ttgccatgat
      601 aatattctag
//
LOCUS       KCKM01000842             612 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13309apa ultra-conserved element locus
            uce-1582, sequence.
ACCESSION   KCKM01000842
VERSION     KCKM01000842.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 612)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 612)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13309apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>612
                     /note="ultra-conserved element locus uce-1582"
BASE COUNT          191 a          115 c           99 g          207 t
ORIGIN      
        1 aatacgtgga tttacatgat gcaaatatta tccctataaa tacttgaata taaataatca
       61 agtcaaagga aatcaacagc gatatcctca ttaaaaatca ccctccaata ttttacatta
      121 atgctctgtt ttttgttgag ctgcctatag aaaaattatt ttaatctgca aactgtggca
      181 attctataaa actacaactt gtgctcctga gggttccttt ttttaacacc tctctataat
      241 ctgcccagcc tgctgagtag cattgacatc agtagtacat caatttcaga aagtggatta
      301 tttttactag acagctattg tgacatattg ggtcagtcat aaatgaaaga tattcatgca
      361 agcatgcaat acttgtaatg aagtctcact ctgaccttct gtatgattga ttctgtaatt
      421 tagttttctc aggcagtgcc tgaaatgaaa tgaaatcatg ttgaacaagt tttgaatacc
      481 cacagtgcac caggagaaga aaaatctgca gccccagagg cttgagagag agcagctgaa
      541 cgatttatct ccatgctatt atagcctttg ccagcattca acatttcttt tttttttttt
      601 cttatttggc tt
//
LOCUS       KCKM01000843            1130 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13324apa ultra-conserved element locus
            uce-550, sequence.
ACCESSION   KCKM01000843
VERSION     KCKM01000843.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1130)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1130)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1130
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13324apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1130
                     /note="ultra-conserved element locus uce-550"
BASE COUNT          340 a          180 c          234 g          376 t
ORIGIN      
        1 gagctgtttg ctttggagtt agtctgaaat ctattttagt gattttgtat gacagtatca
       61 taggccttgc tccaccggcg agttttccct tccctggcac ttttgcgttt ctacaaacac
      121 aatttattgc tttgtgtgcg tgaaactgtc ccatattaca gggaattagt ttaaattgta
      181 tgaaaattat ggttctgtaa gcaacaccca cgaagagaag ctaataaaca tatttacatt
      241 aaaacatgca tttttgtgcc agagaaacac acagctatta aacatcaaat cctacaatct
      301 gggatgggag ggggaaatta agtaggcagt ggaatgctac tctgaatcaa gtacagtgtt
      361 gcaagtttac attatactgg cagtatccaa tcactatttt taattccttt aattaccaaa
      421 atctctagag tatgtaatgg tgtggaatat acacatgtat ctgtaataaa caacacgtat
      481 cttgaagaaa tggatttagt tttggcaaca atgtgatagg gagatcaaag agctagctgg
      541 cattaaaatg atttagatac atttgtcata ggcagctgtt atgctaatct catttatgca
      601 gttgtcagct gataggttct gatgagccag cttagtggga aaatcattag tagatcccta
      661 ttgtgataaa tgttatttat tactgtcaaa tggtattaat gtttgattca aagatgggaa
      721 atgggcatca tctacgtgaa gttcatccat tcatggtcaa tgatgacaaa gggagccgtt
      781 gaattctggc caaaggaact tcatttctgt aagaaaaaag aataatggat ttaatttgca
      841 tatgttttaa aagggtaatg aagtaatatg atgtttatct tggttgaaga gtggtaattt
      901 ttgctggcat agctccagca acatttgagt cattgtgcag catttgctgt tcagttgttg
      961 gttgtggaag gggcttttca aagcagcagg tgcgcaaggg gggtggaaac tcaaatgatt
     1021 tattcattag gccaaaaaat gagcaatctt agtgtctttc cccttatcct ccagaaatat
     1081 atttgcaacc atcttccttc atttttcttc tgctacgtca atatctcttt
//
LOCUS       KCKM01000844             802 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13338apa ultra-conserved element locus
            uce-6719, sequence.
ACCESSION   KCKM01000844
VERSION     KCKM01000844.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 802)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 802)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..802
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13338apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>802
                     /note="ultra-conserved element locus uce-6719"
BASE COUNT          220 a          154 c          185 g          243 t
ORIGIN      
        1 cacgtgtgta ccataactac acacaaaatc tggcattcca aaatgtccag gataacagtt
       61 ctgatcccac caggagtaac atggatggta ttcactgctc gtgctcgtgg ggtcgtacgg
      121 agctctgtgg ctgttgggct gccctagctg gtgacctcgt aatttccaga agcaggtgga
      181 ggtggcaatt atagctatga ccactttctt gaaccttcta tactaggtga tgaattgtaa
      241 atggctagac cctgtgcaca acagtaaact caaataaatc ttcaatgtgt aataatgaca
      301 agactggaag actggcagtt ataacaaggc tgctgttgtc acccacttta ctgtagcctt
      361 gatatccatc attatcagct ggagctagct caagagtcgg acaagaaggt ctgaagaagg
      421 atgagttgtt tgcgctgaag cgtccagtag gtcccatctg gcagagtgta aatgggattt
      481 tttgcctgtt cactgggcca gagctgtcca tcattttggg cagctatctg atcacttcat
      541 gctgtgggac aatatggctt tgtgctgttt ggtacagcaa tggcaattaa aataactaaa
      601 tttttcattt atttcaggct tctgttttac ttcagccaaa ggtgatccta agaaacaact
      661 tttacattaa cagaactttt tatttctttt gagtcgggag gtcaagttag agcagacagt
      721 gccaagttac tgaaaacgtt aaggtggtaa tgcaaaatta tttagaaata tatgtgcaat
      781 ggaggttttt ttttttccca gt
//
LOCUS       KCKM01000845             809 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13354apa ultra-conserved element locus
            uce-3368, sequence.
ACCESSION   KCKM01000845
VERSION     KCKM01000845.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 809)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 809)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..809
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13354apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>809
                     /note="ultra-conserved element locus uce-3368"
BASE COUNT          267 a          132 c          142 g          268 t
ORIGIN      
        1 aaaaaaaaag aaagaaagct atttccactt aaaattacaa agcttttatt gtacaatgct
       61 gccaggtgtt tagaaagact tctctagaca ctcagccatt aaaccaagct ctgactaaca
      121 aagagacgct taattttttt agattttaaa atattcctat tccgtgactg acatcctttc
      181 aataactgaa tttaataaag atgtacctta tcaggctgtg cagataacat gaagtgctag
      241 tactaatgct gtacaatatt cttcaaacag attagcagga tgtgcgcttc agcaaattta
      301 ttctggctat ctccactgaa tcagctgtct gctaatgctt gtacaactca tacaccaata
      361 gtgttatcat aaacacagtt taatagaggt gacttagtga ggctaaacat aatattccta
      421 aaccaactga gagctaaggt attgtgcacc acctttgaaa aataattaca attaagagag
      481 atgctgcaca ttttagaatt tgccaagaca gtgtgtgatt gtcagaatag atctttataa
      541 atataataaa ttgctgatgg gtaagttttt gaggtgacat gcttcttgct accagtgcaa
      601 caataccata tttctgtgga ttattgtgtg tgcagatatg gtggtgaagt gatactgatg
      661 gttttgataa ttgagtagca aaacagaaac atgttgtgac tgtgtattat taatcagttt
      721 tcctaaaatc tcaggttttt gtccccagag tgaagcataa ttacgtggtg taagattatc
      781 tattcatttt catttcttac atattcatt
//
LOCUS       KCKM01000846             438 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13368apa ultra-conserved element locus
            uce-7125, sequence.
ACCESSION   KCKM01000846
VERSION     KCKM01000846.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 438)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 438)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13368apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>438
                     /note="ultra-conserved element locus uce-7125"
BASE COUNT          131 a           80 c           66 g          161 t
ORIGIN      
        1 atcagtgtat gcaagggggt gcaacccctc ttctcttcct ccccaggtca aacagtatgg
       61 acagttttca cacatatcta cctgtataac cctctgtacc tctcataact ggtcaatgac
      121 tgtaacaggt tacatcaggt gttttttcta catacttttt acacaaattc tatgcgatta
      181 atgtaactta attcaatgca tcattttatt gtactagttc ttaagcttgt cttttatttt
      241 ttttctaggt gactgtggtt tcttgtgatt tttattgtat aaataaatga ggtggctgtt
      301 gatgcttact ctctgttact aagaattttt acctttttgg aagaaagcat tgctatgaac
      361 taatgaattt aaaacgtcat ttactcattg taaatacagt attgtgcaaa aaacaaaaat
      421 gaaaaaaaaa aaccaccc
//
LOCUS       KCKM01000847             860 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13384apa ultra-conserved element locus
            uce-738, sequence.
ACCESSION   KCKM01000847
VERSION     KCKM01000847.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 860)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 860)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..860
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13384apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>860
                     /note="ultra-conserved element locus uce-738"
BASE COUNT          209 a          220 c          178 g          253 t
ORIGIN      
        1 tctgccctcc agccccacgc tggtggtggg gatgagaggg agcattctgc gtgggagctc
       61 tcggactccc acatcagctc tttcccacct ccagtggggg cagcttgcct tctcacagca
      121 aaggatactc accatttatt gtatttctct ggtgtggtgt gcttggtttg atcgagtcct
      181 ggagagcaaa tctgaccaca gatctgtcag gaagtttaca ttacaaatta gctaattggg
      241 ttctaaagga tttgcaagga aaacacttcc cactctacta acagctatgg cacacacttc
      301 agcttctttc tctctctctt tttttaatcc ctggaactta taggttgcaa aatcatgtag
      361 aagtgtagca catacacaca cacaaaacac acacacacac aaaaccccta gcactgctgc
      421 tcttttagtg cctgtgacct tgaagccgtg atgagccggg gagatgctac aaaatgtaca
      481 ggctccacca gatgagggac tttgatgctg gggggagctc tggggtcaag cacagaaagg
      541 ggaaataaat ggtaaaatca ctgtctctag actcctcaga taaaatggaa acaagcactt
      601 ggcattttca gtgctgacaa cctggcttgt ttgttcactc taatgagcac tctggctcca
      661 ttaatgagca gactgaatcc attatcatca tcatttcaaa aggcagcgtg ccactaaata
      721 gcttcccata ttagcaggca ttgcccttgt tgttccattt gatcagcagt ggcagcaggg
      781 agcccgctgc actcccactt ttttttcctc tccctttttt ctcccctcct ctttttcctc
      841 tttttttttt tctttttttt
//
LOCUS       KCKM01000848             817 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13399apa ultra-conserved element locus
            uce-7205, sequence.
ACCESSION   KCKM01000848
VERSION     KCKM01000848.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 817)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 817)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..817
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13399apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>817
                     /note="ultra-conserved element locus uce-7205"
BASE COUNT          167 a          189 c          259 g          202 t
ORIGIN      
        1 gatcttacgg tgtgaaatac gggttgggct ggtagcactg tgtctgtcgt agcagctttc
       61 tccatgcaaa ggtctaaggt aagaagcaac ttgaaaaggc tgcgtggctt gtgaggaagc
      121 aagttagctc ttaatcatat catatattag cctcctttgc agcagataca tctgctgtaa
      181 aatgcttagt gctgagagcc tgattgggca gcccatgcta agtgttcaaa ctcctgctgc
      241 cttttttctt caaacaatat cttctggctt ccagatttct gataaattga taagaggaat
      301 tgcgtgagtc aatagagttg tagacacttt gccaatataa ccctagcgct attgatctgc
      361 cagtaaatta aagtcttact tagaggctgc cgatatttct aatctcctgc ctcaccaatt
      421 acaacctccc gctacctggg aaagacagcg gacgggaggc aagacctggg aggggctgcg
      481 gcgcggcagc cggagcccgt gtggggctga tggggcttgg ggagcagctt ttggggcagc
      541 aggacggtgg tgccctgttt gggagcgctg cagaagaagg gtgtctccag gccagggttt
      601 gtcctgctgg gggacagagg tggttttaga ggggagggga gcccccgtcc ctgggctgtg
      661 tgcagccaca gcgcgcgggg gtctgccccc ggccttcggg ttgcccttca tggtgcagca
      721 gaagggacag gcagatttgg gggtgcttgc tgggagagga ggggtgtggg gtccccctgt
      781 cctgtggctc ttgccccgct gccctcctga gctgaga
//
LOCUS       KCKM01000849             917 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13413apa ultra-conserved element locus
            uce-7629, sequence.
ACCESSION   KCKM01000849
VERSION     KCKM01000849.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 917)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 917)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..917
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13413apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>917
                     /note="ultra-conserved element locus uce-7629"
BASE COUNT          300 a          136 c          159 g          322 t
ORIGIN      
        1 tcgaagaatt aaaatgacat gcttcatgtt ttcgtaagtc ttgttgaagt ctgttgtttt
       61 ttaagcttgc attcccactt acatgaagat tataatttga agaaaaaaag ctaccccgaa
      121 acagtttttg taatgtgcat ccttaactga caaaaagtaa ttggaaaaga atttttgtat
      181 ttgtaaggtt tgaccttgac attgtttgtg taggcctcca aagcaattat tgtagaaact
      241 gagatggaag acaatggcaa aaagcagaca gaaatgcttg aattagtgca aagcacaaac
      301 atagctgagt ggtattagat gacagtttac ttttaatgag ggaagacatg aagtaattaa
      361 atcttgacat acaattatga aaaatatcag gtaacaagct agctatgcaa tataaaataa
      421 gaaaagacat tttctgaaaa cttgcctgat gctctgtcat ctgagactgt tctttatgag
      481 tgcagggtga aggtcaagga ggtatctcaa ctccatcaat cctttggaca gttacaaatg
      541 acctttcact tttcataaga cattcaatat tctgaatggg ggggatacat ttttctgtgt
      601 ttagaaaata gcaaaattga aaccttttac agtgcacaag gtgcatttgt gtttgaatct
      661 cctgaacagc tcattcattc ttaaatgttc attgacacca gtatctcatt tacatgaact
      721 aaatggtttc tttttcatta tatactttaa attttcataa ttctattaca ttaatttttg
      781 tgctatattg tattttatgt tttcttcaag caatatttta aaacgctaca gtgcagagtt
      841 acgggtttga attgttaaca atctgatttg gtatgtctgc aaatccaagt cttatacaac
      901 atttttgttt catattt
//
LOCUS       KCKM01000850            1032 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13428apa ultra-conserved element locus
            uce-6071, sequence.
ACCESSION   KCKM01000850
VERSION     KCKM01000850.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1032)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1032)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13428apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1032
                     /note="ultra-conserved element locus uce-6071"
BASE COUNT          291 a          233 c          257 g          251 t
ORIGIN      
        1 aaagctctga catcgtggag aggtaacttg agaaggcaca gtcctgctat gtcgctgctt
       61 tttttttttt cctgttctgg agagaaccag tgcattttag agttgtagcc ctcaagggaa
      121 actatgggaa ttctgattat tcactgaaag cctcctcagt cagtaagcct tccacgtaaa
      181 tagtttcagt accctattga tgtgtttaca aataagtttg tttaaaaaaa aaacctagaa
      241 ctcctgcata ttttgtgtga gaacatcatc ccagctttgg ttccaagata gcttaatgtt
      301 cttaagggct ggtagggaac atagtttcat tacaactgca catattacgg gttttgtatg
      361 aaatgagcat ctcaaggcga gggaaagaaa gcagcattgt tccagggctg tttttcacag
      421 gcctgtattc atatctcatc cttgttgttt gcaggagagg cagatgtgaa ccagaacaat
      481 gggacctcca cgaagagccc agcggtgaca gactccaaag gcacagcaga cccgaagaat
      541 gcctggcctg aggccaaccc agctgacacg gccggtcgcc cccacttgat ccgcctcttt
      601 tcccgagatg ccccaggaag agaagacaac accttcaaag atcggccctc agagtcagac
      661 gagctacaga ccatccaaga ggacagtgca gcagcttcag agaattcgga tttgatggct
      721 tcacaaaaac gctcctcttt ccggcacgga tcaaaaatgg catccgcgag cactacagac
      781 catgctagac atggatctcc aaggcacaga gactcgggtc tacttgactc gctgggcaga
      841 ttctttggag gtgaaagaca cgttccccgg cggggcaagg tgagctctga ggagtagaga
      901 actgcacagc tacggaaaat acggttgggt ggggctaaga ggaaggtgta actgctataa
      961 tgcaagagtt gacttagcca gcgagatgat acttgcagat gtgtaattta atgcttggct
     1021 ttaaactgaa aa
//
LOCUS       KCKM01000851             835 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13444apa ultra-conserved element locus
            uce-3068, sequence.
ACCESSION   KCKM01000851
VERSION     KCKM01000851.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 835)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 835)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..835
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13444apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>835
                     /note="ultra-conserved element locus uce-3068"
BASE COUNT          272 a          129 c          133 g          301 t
ORIGIN      
        1 aataaaagta ttaaaaatat aaatatattt tgaggtaaat cactaggtgg ctaattagaa
       61 aacgtacata taaaagttaa tttgtagata ttaattggat acaattttaa tgttattccc
      121 atccagtatc aggtagttag tttaaaagaa gtaaaaagac tgtgatatgg aatgtctttt
      181 tttcctttta tagacttggc aaagaccatc agtttatggc ctgtttcgtt tcttgccagt
      241 agacagcact gaaagttata aaactaaaac aattgctttc atttatatct tttcctgatt
      301 actctgatag ctgaaatgtc tgaagaagtt cagaatctgt aaagcctgtc acattataga
      361 aacatgtctc tttaaagtaa atgtgaaatt ccagtaattg aagtgataaa tctactgttt
      421 ttgctggggt acttttgatg agaactacag tagtaaatta gaaattattc tctgctgtta
      481 tatcatggta aaagcctttc cattatctgt tgtcagtcac taggtatggg caaataactc
      541 agttgtcaat ctaactgtga aaccttaagt tctgggaata atcaataagg aaaaaacccc
      601 caaactctct attatcttca cgtaattctt cagacaacct gaagttgttt ttcttccctt
      661 tttacttctg cacatctcag ttattcacag atatattgga tctcttagaa tatttcattt
      721 tttatagcaa gttacatgtc agcttgtttt caaatggtac gtgagactta catttcaata
      781 tgggtaagta gttctacctg tgtgtctaaa tgcaatttta cacatgatac agact
//
LOCUS       KCKM01000852             647 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13459apa ultra-conserved element locus
            uce-4891, sequence.
ACCESSION   KCKM01000852
VERSION     KCKM01000852.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 647)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 647)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..647
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13459apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>647
                     /note="ultra-conserved element locus uce-4891"
BASE COUNT          235 a          105 c          112 g          195 t
ORIGIN      
        1 aagagtttgt tttcgaaaac aggaactcaa ttctagacaa tgcttaattt aaactaagtg
       61 ttaaaataaa agcaataaca ctgagaataa attaatgaac tacaattaag tatatttaca
      121 ataagtggtt tagttggaaa cacctattct ctacactgat aaaataaaac ctgcattctg
      181 caaaagctga aataagttaa atgaagatgc ttttaacaag gttattactt aagcagtgac
      241 aggtttacag attttagcac cactgggttt tcacaggagc tacagcaagt gctaaaataa
      301 cacacacctt caggttcatt aaattcacca gtgtgatgaa ataactgata tttttctata
      361 ttactatagt gcctcaaaga actgactata aataagatac actaataaca actgtttgca
      421 gtgctaaaac aataaaataa ttcttccagg cttatatgca aaggaagaaa taagtgtaag
      481 gcagactgtt agtatagctg tatctggtgg cttttattct gctggtatga tgccttcagc
      541 catttactta tcatagaaat gccctataaa atgctttatc attcactgtg gcaggaagga
      601 acttgtttaa gggctacatg aagagggggc tcccgtcctg aaatact
//
LOCUS       KCKM01000853            1002 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13475apa ultra-conserved element locus
            uce-415, sequence.
ACCESSION   KCKM01000853
VERSION     KCKM01000853.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1002)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1002)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1002
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13475apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1002
                     /note="ultra-conserved element locus uce-415"
BASE COUNT          375 a          169 c          143 g          315 t
ORIGIN      
        1 tgttggagga agaagggaaa tacatttcta tgtgtcttta acatagaaat acaattgaaa
       61 tacactatct tccacttata atgtcacata ccttgaaaaa caaaaccaaa tttgctacaa
      121 agtcaacagt aaatcttttg aaaaaaacat tcatatgtaa aaaaaaatcc cctaaatatt
      181 taattttaaa tagtgatcac attgcctaca gcttactgtg tttttgttaa tgccatgcga
      241 caatctaaga aaataaacca cagttttcgt atataaatgt aatatctgtt aaaaaatact
      301 gatctcaact tatctattgt tagtttacaa ataaaaatgt agataattgt aaattagggt
      361 aagcaaagca tgcaaatcta tagattctat atctgaattc ctagattagc attaaaacca
      421 atcaccgcaa caaatacctc aacagtatgc cttgtgtgca gaaaggaagc gatactgaac
      481 attcaatgcc acaactgtaa ggttttcgga gaagcacctg tggcagtttc agcagtttct
      541 atatggaatg ctcccccttt ctaggattac ttgaaaaaat caagtcaatt cgaattacgt
      601 agctgtaaaa cattgacatg tgtagttttt acagtttcag aatcttctgt ttgatttaaa
      661 cgggcaatgg tgcataaaca ggaaacttat atcataaggg atcacatatt tgcaggcaac
      721 attaagatta aaagttacat taacatacat aaagtgctgt agcacattat ttaatatgta
      781 agccattatc atgtgaccac cttaacaaca agatactaag ccttttatgc ctttaaagca
      841 ttattactgt catcctgaaa ccaatttgtc agttcttcac caaaatttat atagaatgga
      901 ttaaaattac cggtcaactc atggcttcaa ttactttaaa tttagtaggc tgtatctcaa
      961 aagaattagt aactattcct atataaaaat tagcagatac aa
//
LOCUS       KCKM01000854             641 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13490apa ultra-conserved element locus
            uce-3211, sequence.
ACCESSION   KCKM01000854
VERSION     KCKM01000854.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 641)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 641)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..641
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13490apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>641
                     /note="ultra-conserved element locus uce-3211"
BASE COUNT          191 a          117 c          133 g          200 t
ORIGIN      
        1 gttttttcca ttccaagacg tgctaagcaa gttgcttgcc ctttcttatt cagagtgaaa
       61 atactttgat ccagttttcc gaagacaata ctcgtttcat aagaatattt aatcagtaga
      121 aaatagggag gatttagttt gtttgtttag tatttaacca agtgaataag gcagattagg
      181 ggaagggggg gagactggac ccataaacaa ggtgatatat aatatttttt ttcgttctcc
      241 ttttaaataa ataccgatca gctttatgtt cagagacaat aggagccgtt ggcttaaatt
      301 tgcagtttac tgtatttatg gctgtaatat caaggtgctg ccgtcgtaat ttcatgcccc
      361 aatgagaaga gcaaggtcga agcaaatgct tccatcggca tctgctaaca cactaactca
      421 taaacaaggc ccggctggat caggtggcac ggaataatac aggctaatga aatacagcac
      481 agctttccat tactgttagt ttttacagtg tcgtcattac gtgtaattta tgtttaaaaa
      541 attcaatttt atacaaggct ctgggaaata ggggtctgca ggtcacccga cgacttttaa
      601 cggctctgag agtccttatt gcactctact gttccaacaa a
//
LOCUS       KCKM01000855            1069 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13505apa ultra-conserved element locus
            uce-4327, sequence.
ACCESSION   KCKM01000855
VERSION     KCKM01000855.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1069)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1069)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1069
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13505apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1069
                     /note="ultra-conserved element locus uce-4327"
BASE COUNT          326 a          281 c          189 g          273 t
ORIGIN      
        1 acagtagcac atttaagatt ttcgtatttt tatacctccc ctcacataca ccttccctcc
       61 atgtacgacc agtgcagcag cttaaaaact aggataaaac cccacatgtt catttaaaga
      121 ggcaaacaca tccacattca agtatatttc acatttaaaa actaaaccaa ccccctcttg
      181 aaaggttaat agaattttat ctgtgtaggt aagcagcaac tactgacaca gatgtgagta
      241 accgaatata atacggagaa ttcagttata catctcctta tgttgccatt ggcacacaca
      301 atgaatttgt ctcattagca ggggctactt agttcatcgt agtaaacaaa gctgccgata
      361 atgacagcct cacatacttt tcattcattc acatattttt ctttacttag acttctagca
      421 tgtgccacag aagagctgaa tgttaaacat tcctggagtg tcacaatatg taatacaata
      481 aaacagatta caaccatacc tttctttcac agcagtggtg ccaagcacag gtacactgta
      541 gcaatcaatt tgttctgcag acagtaaggc tttcatagaa tactaatgca aaatctcttt
      601 tctttctcct tcgacttgac tccccaatgc cccggtcccg accaatacaa ggaggagggc
      661 agaatgtctt ctgctgagat aaccacaact actaatcaag tatacgtgta caagggcacg
      721 ggattaaacc tccaccaggc ttgactcggg caccgagagc agctaaacac acgcacagca
      781 aggtcagaat taaacgccac gcacacgcac gcacgcgcat ctacttgagc gaactaattt
      841 atcacacttt accactgacg gctttttacc tcgagggagt aaaattacat cctggtgaac
      901 tgacgaggtt cagacaccac agcttccaac aacaaatcag atctcgcaca aacgggaatc
      961 atgctctttg gcgaacgctc ctctctcccg gctttacagg cagtttcgga aactcgtttc
     1021 ccgctgcgcc cacgcgtgtg cgcacgtgtg cacacaccca cgtgtgcac
//
LOCUS       KCKM01000856             847 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13521apa ultra-conserved element locus
            uce-1867, sequence.
ACCESSION   KCKM01000856
VERSION     KCKM01000856.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 847)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 847)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..847
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13521apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>847
                     /note="ultra-conserved element locus uce-1867"
BASE COUNT          221 a          168 c          156 g          302 t
ORIGIN      
        1 tgctatatgt gaattgctct agggttataa atagttatat tccatattct ctgaatttac
       61 ttgcagagga ttctttactc attttatgca tgcggtatat tttgcgtatg tctagttttg
      121 catgcacata cggaccctga ctttgtgtct gcagtagtca aaacaccctg aaaggcaagt
      181 ttttaaaatt taaacatcca ggtaaaacta aaattgcaga tttctcagtc ccaatataaa
      241 tcgtatgtca tacagtgcca tttgactcaa gatactttgt tggtatgtga atgatggaat
      301 gcagaacatc cacaaacagc acacccttat tccaataacg gagaaagttc actggcttaa
      361 tttttctgta ctttgtagcc atagctccac tgtgtgttca gtatgtctag tctcttttca
      421 ctataaccaa cagaagcacc atacaaagtc ttacaatgga tgtcttaatc tctctgtgtg
      481 cttttagagc attattttga attccatcat gcaggctctt ttttttttct ttcctcttct
      541 gaagttttat tacaacaaca gaattcccag ggagctttag gggcaaggtt cgcataatat
      601 tgccctaaag ttttgcttga gaggtggaat tcgcacccca gtcctgatca tctttttgtg
      661 gtgtttctct ttctgagagc tgtggtgcgc agtcttacag agttgttaac tgtgtacaga
      721 tttttttatt gtttaccaga cagtgcacat ctacaaacct ttcatgatga tttctttctc
      781 tgacctctca gtgactaggc atcttgttcc ttaacactga gggaggctga aaaatgcttg
      841 agttgct
//
LOCUS       KCKM01000857             996 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13536apa ultra-conserved element locus
            uce-2903, sequence.
ACCESSION   KCKM01000857
VERSION     KCKM01000857.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 996)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 996)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..996
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13536apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>996
                     /note="ultra-conserved element locus uce-2903"
BASE COUNT          313 a          181 c          182 g          320 t
ORIGIN      
        1 aaaattaggc agggagatgc ttgatcttaa atatctggat taaactgcca catggaagaa
       61 aaccaactga gaaaagctac atatctgttc taaaatcacc tatgacctgt ctcactctgt
      121 gacatgccct aaatttttgg tcttcttatt ttcagaatgc agtgtcacac tactaaggtg
      181 accttttttt aagtcatttt tgttttaact ttttttattt ctcctccttt aatctaagat
      241 gagagtttct gacttataat tattaaagag gctggtaaaa ctgcacatat tgaagaacag
      301 attctgtagt agtagtagta gctggcagaa atgttaagtg cttttcacag tcaacattca
      361 aacagattat cagatggcat atttcaccct gttgttactt taaatgaagt gaccatgaaa
      421 tcaacaaatc tgctgtcagg tgcctgtcac gaagatagtt ctccctgtca cacaatgcct
      481 cacataacag gtaatgtgtt tttaagaatc agtcctgtgt cacctcatca agtccttgtt
      541 aaaagatgaa ataagacgga tggtgttgtc tcccatggag ttgactgaaa ttcagtaaaa
      601 agcgatccat gttataaaaa aaaaaaaagg aaagtaaggc aggtgccagt aagatgcctc
      661 tgactgtgcc attactgccc ttttcctttg tcttgagaac gattattcgc ttttccccac
      721 ttatttctgt ctaagctgat aattaattgg gtcaagttta agttctgtga taaggatatg
      781 aagaattaat cctcagtcat caaacaaatg agaactcaga gtggtgttgt gccagtagcc
      841 acacattcac ttggaatggt taagacctgc ttccatgcct aacagagatg acactcataa
      901 ttaagttatg aggtgttgct aacaataatt ttgttcagga ttcttaagtt taatcattaa
      961 attcaaggcc agggataaac tgaaattacc atattc
//
LOCUS       KCKM01000858            1061 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13551apa ultra-conserved element locus
            uce-1613, sequence.
ACCESSION   KCKM01000858
VERSION     KCKM01000858.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1061)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1061)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1061
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13551apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1061
                     /note="ultra-conserved element locus uce-1613"
BASE COUNT          353 a          212 c          237 g          259 t
ORIGIN      
        1 tcaaagagca attaaggatg atctttaaga acccaccgaa atagtacgga acggagcgag
       61 tcaggctccg ccgtcctgaa aagcgatgct gagtcacgtc tgacagcggc gttcggagga
      121 ggaggagagg caaacctgga gcaaggcaag ggaggaacac gcacgggatg tgtggaaaga
      181 ggaaacaaag agacagcgac gaggtgaaat cctttgatat ttcctcagct taaagaggta
      241 attcaatgca ttaaaatgga tccttgaaat ttcaaaggat gacactcgca caacaaagat
      301 tgtcgagagt gctattttct aggattagaa caaaaacgta ttgggatttg ctatatgatc
      361 ttacatcgcc gagcgcgact gtatacttgc tgttatgcaa gcaccacctt ccaatggcga
      421 attttcataa ttataacaga aaggcgtaaa ttttctaatg catggcagtt caaaaagtaa
      481 tcaagagaat gagcctgagg gctattttaa tgtatgcaaa gctagtgacc cacagtaaat
      541 gggaggtagg cttcaatgaa tgcaaagtaa tgcacacata ctaaagacct ggtctgatga
      601 gggacggcta aaattaacac ccaattaatt tccgaattga caaacaaatg aaacccataa
      661 atctactttc tcattaattt tcttgtggta taatttaaag cagtaatatg agggcaaaaa
      721 ctgagcatta tccatcataa atatcaaaaa agatagcact gtaacaccat aaattatgca
      781 tattacctgt tgttaaaaat gattaatgta ttatcaactt tatcgtgcac tgtatatgtc
      841 tagacgtatc taaaacctga aatttcattt agtgcttagg aaataaaggg tccacaagaa
      901 atgggattat tatccacagc gcatcctcgg ctctggctcc tgacacagat gccgccccag
      961 cactctcccc tcttctggac ttgccccaag ccttgggtcg tggaggtggg gagcatcaca
     1021 caggtgatgt gcgaagcctc cccggggaaa ggaaacaacc c
//
LOCUS       KCKM01000859             452 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13567apa ultra-conserved element locus
            uce-6412, sequence.
ACCESSION   KCKM01000859
VERSION     KCKM01000859.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 452)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 452)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13567apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>452
                     /note="ultra-conserved element locus uce-6412"
BASE COUNT          140 a           81 c           77 g          154 t
ORIGIN      
        1 aagattatta ttattactgt tgttgttact gctgtattat ttagattttg cccctgaagt
       61 gagctccccc cagcacattt ggatgattag gccacatttg gcctacactc cgctggctag
      121 aaaagccttc ctcctttgta tattcagaac aagtttcatg agaagtatct cagaaacatc
      181 tgccttcatt ataattatat ttctatttca gctgcaccaa gctatttaca gatgagcctg
      241 ttcataaaaa gctttataat taagcaaaca gaaatatctt tttataggat gcagatctag
      301 gggtgataat cacacataaa atacacagca acagttgcaa atagagtgtt taatgctagt
      361 tatatagtta gtgatgtgct caataaagcc tgacatgtct ttgtttctaa atgtaagaaa
      421 atatggtctt tgctactcaa ctgtgtaaat tg
//
LOCUS       KCKM01000860             949 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13597apa ultra-conserved element locus
            uce-711, sequence.
ACCESSION   KCKM01000860
VERSION     KCKM01000860.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 949)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 949)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..949
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13597apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>949
                     /note="ultra-conserved element locus uce-711"
BASE COUNT          306 a          152 c          209 g          282 t
ORIGIN      
        1 aggacattac ttgtaatcaa aatgtgagtt aggtgtttat aaaacaactg gtgggtgctt
       61 gtatgcatgt gaaatttgct tacacgagta atcccattga tttaaatgag agcattcatg
      121 tgatgaaaac aagttcagcg cgggaacgtt tagaagatgg tgaccttaga aacgaacagt
      181 cctctttgga agtattcaaa gggtggttat taaaacttaa agccgagagt caccgtttga
      241 aggcagaacc gttgagaaag acgtttgggg acctcacctg ccaaataata atacgttgta
      301 atgacgccga ataactctgc ctcaatttcc tcgtactctt ttttgatggg gaagggttgg
      361 gaaggagggc gagagaggga cagtgacagc gaggctgttt gtttttcccg aaagttgttt
      421 gtgatttcag gtactcatgg gaaatctctt gatcagattc acatctgttc ctgtcaaagt
      481 gggtgctaag ataccggtca cccagcaacc atgtccaaga gggaattggg ccgataataa
      541 cttcaaaaag gaatgacaga tgctagatta ggatgaaaga caaaacgcat gaaaaatgag
      601 cttgttagaa taaaaaaatt gttcaagcac cttcatgcaa attaaacgaa tattgaacat
      661 ttgcatgcag tgatttctac tttttctgtt gattgaggag aaataaagat ggtacatatg
      721 aaaacataaa tgtatttttt ttttgcacca attaacatac aaagcagtat ctttcttctg
      781 aaaatgagat tagccacctg ggtgcttggc tgtatctcac atatgtcaca acatttttgt
      841 aatgagtatg cttctgttga aggaacacct tatttaattc ttcgtagcaa aacaaacaag
      901 gaagcaacct tatattaatt ttaaaatact ttaggttagt atggttcta
//
LOCUS       KCKM01000861             289 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13613apa ultra-conserved element locus
            uce-1900, sequence.
ACCESSION   KCKM01000861
VERSION     KCKM01000861.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 289)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 289)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13613apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>289
                     /note="ultra-conserved element locus uce-1900"
BASE COUNT           98 a           54 c           68 g           69 t
ORIGIN      
        1 agcgcgcgtg ggacagtgac acagggtggg ttcagccggt aagcgctgcg gcagcctgct
       61 gggaactgga agaagtcgca caggcgtgtt ctatacaagc catttatttg aaatgccaac
      121 tatacgtagg ataaagtcag tgttacatgc ttctcagcaa cagtagaaaa atagaaccag
      181 tgaaaacctt tttacaactg taatggtact caaaagagaa atgtattgtt ttacaatgca
      241 tcacacaaga ctagaattca agtttggagg tacctaaata aaaatacta
//
LOCUS       KCKM01000862            1030 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13628apa ultra-conserved element locus
            uce-3237, sequence.
ACCESSION   KCKM01000862
VERSION     KCKM01000862.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1030)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1030)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1030
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13628apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1030
                     /note="ultra-conserved element locus uce-3237"
BASE COUNT          212 a          367 c          300 g          151 t
ORIGIN      
        1 accccgatct gcttctcccg gtgcagctcc ctctcctccc tctcctcggc cgacaacgtg
       61 ctggacgggc agagccacag cgagaacgac ctggacagtg actcctccct ggagatcctg
      121 gagatggagg aaggggacgg ggaaggtgag gatggggggc aggagaagga gaaggctgtg
      181 gatcagggtc cggctgcgct ggcgggcatt tcccagccca tcaccatccc cttcccaaag
      241 cgcgacaagg tcttcctacg ggagtcatcg ccgtcgcgcc aggacgacct cacgccctcg
      301 agctcctcgg agaactacat ccaggagacg ccgctggtga tgagccgctg cagctccgtc
      361 agctccctgg gcagcttcga gagcccctcc atcgccagct ccatccagag cgacccttgc
      421 agcgagatga tcagcggcac catcagcccc agcgagctgc ccgacagccc cgggcagacc
      481 atgccgccca gccgcagcaa gacgcccctc ttcgagctgg gctgccaacc cgagaaggag
      541 accagccagt tcaacatcca gtgggagaac aacgtcaaga agttcatgga gatcaccgac
      601 ttcaaggagc gcttccagct gccccaggac ctggactcca tggtctactt caccgtggag
      661 aaacccaacg agaacttctc ctgcgcctcc agcctgagcg ccctgcccct ccacgagcac
      721 tacgtgcaga aggacgtgga gctcaagctg atgcccacct tcccggagaa gaacagcctg
      781 aatttcgtgg ctcacgagaa gcgggaggag cggcgggagg agcggtacct ggagggccgg
      841 cggcgggccg accgccccga gcccccctcc gacgatgaca tcgagatcct gaaggagtgc
      901 atcagctccg ccatgccctc ccgcttccgc aaagtgaaga cctccctgct ctccggccag
      961 gtcctgcacc cccagacgaa gaagccggtg cacgtccccg tctacatgct ggtgccagcc
     1021 ccctctcacc
//
LOCUS       KCKM01000863             667 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13658apa ultra-conserved element locus
            uce-3505, sequence.
ACCESSION   KCKM01000863
VERSION     KCKM01000863.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 667)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 667)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..667
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13658apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>667
                     /note="ultra-conserved element locus uce-3505"
BASE COUNT          206 a          117 c          157 g          187 t
ORIGIN      
        1 aggatgcagg caactggcag gtggaggggg gaaagcagtg caaccacgac cgctttacag
       61 gggaagtacg atttcaaccc tttttgagtt aacaaacagc actcagattc ccctctcagt
      121 tttgggagta gggaggaagg tgagtgggac taaaaatttt gggtgttgat tttttggtgt
      181 ttgttttgga aacatttcat gacacgtggt cagtttgatc tgttaaacta aaatggtaga
      241 ccagcttaag tcgacactga gctctgacaa tcaagcccag ggaaccagtg aaggaacttg
      301 tatgaactta cagcgcaaac cgtcagcaga ctgggaagag ttttgagggt tacggtaaat
      361 gttcaagagg gcaatggtct gaaatacaaa acgcaacaac tttatattat ggaaaataat
      421 tttaacaaga aaccggtttc ctttagggtc gctttagtcg agtctgtgct gaaagagagg
      481 tggttattct ctccccagaa ggagaacgtt cacttagctg gtgacctttc tgaatcaacc
      541 taacactgta aagtaataga gatctcatga tactccatta ttgtattttt taaattttat
      601 tcaccgatca gatatgtaac agatggcatc caaacacagt attcaaatta caagcataat
      661 aatttgt
//
LOCUS       KCKM01000864             653 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13674apa ultra-conserved element locus
            uce-2540, sequence.
ACCESSION   KCKM01000864
VERSION     KCKM01000864.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 653)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 653)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..653
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13674apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>653
                     /note="ultra-conserved element locus uce-2540"
BASE COUNT          191 a          142 c          145 g          175 t
ORIGIN      
        1 tttttttctt gtgactccaa agtgtgctct ccacaagtgg aatgaacctc gctctctccc
       61 agtctgttcc ttgtcaattc gcatcagttt aaggtcagga aagccaaggg ggaacaaggc
      121 gctgcagcat ttgaactcaa ccttgctttc caaggaacaa actgacaatt agtacaggga
      181 tcagcatcaa aaaagagcaa ctcagcgtga agcctgtcta attagtcata tgaacggagg
      241 gcttcccctc cacttcctcg ggaacacatg cctgtcagat ctgatccaaa gagacttctc
      301 tccccaacag aacaggtagc cctggctgaa tcgcttgttt cagcaagggc aggctgagct
      361 ggaacatctt gttgcaacca agtgattgca ggatcttttc ttcccttata aaacacagag
      421 tggggaaaaa acagggcatt gatcttgttg ctatcttctc gatttaataa aacttcttgt
      481 ttagatggaa aaatgagcaa aaggaaaaat caaagatgaa agctgaatga cagtctccta
      541 atctcagaga attgtgctgg ttgggagact ccacgtgcct gacgtggggg agttttatta
      601 tttattttca atttatgaac cagagcatgc atttatgtgc aacaaagtgc aag
//
LOCUS       KCKM01000865             926 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13689apa ultra-conserved element locus
            uce-6342, sequence.
ACCESSION   KCKM01000865
VERSION     KCKM01000865.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 926)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 926)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..926
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13689apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>926
                     /note="ultra-conserved element locus uce-6342"
BASE COUNT          295 a          182 c          173 g          276 t
ORIGIN      
        1 cacaattaca aactcctaat caaacaagtg aagaactaca tcttggtcag atatctcaac
       61 tgggcactgt cacaaataac tgcctgctac aattaacctc tttggcatga agtctggact
      121 tcttcatgct gtattctaat tcagtcgcct ctacttttgt tattcaccac ccatttctct
      181 gaaaccagca atgtcaagag gtcaacaatt acattgctca gaacacacca cgaaagtaag
      241 agtgacccta tattatatct tcatttttcc cctttgatca tccctttatt tgactgtatt
      301 tcagtaaatt atccatgtag tttttatttt gacagctctc tttacagcag taaaacaaaa
      361 tgtgtgcatt gcaaatggca aagattcaaa tttcagctat gtttatccaa aatagcactg
      421 aactgcttct gtacttatgc tatactgcct acagccttac ggaaggggag acagatggga
      481 tgaatttagc agggaaacag ctgtggcttg aagaagagac aagcaaaagt tttgctatca
      541 ggcttcatta tgtatcaagg taccagtaaa atgtgtatcc gtaaggcagc caaaaaagtg
      601 tttttcattt gactagtgat aattaccttt tctcaacagc tgacaatgtt ctaagcagca
      661 ttaaataggt ataataatta agcaataaga taagacaggc agtgccttgc tggggattat
      721 tgcttgcctt gggtgtgttg cgaggcacaa ggctgaaggg cgagtgactt cagccacccg
      781 agaaatgtaa taatccccca gaaatgcact gcctggagtg tcttcttgct attaaaaatt
      841 gaaatttaaa aaggacaaaa tgttagacac acttcctgtg gattttattg acatgggtta
      901 acattacaga aagtcaatga agaaat
//
LOCUS       KCKM01000866             902 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13705apa ultra-conserved element locus
            uce-3134, sequence.
ACCESSION   KCKM01000866
VERSION     KCKM01000866.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 902)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 902)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..902
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13705apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>902
                     /note="ultra-conserved element locus uce-3134"
BASE COUNT          306 a          154 c          160 g          282 t
ORIGIN      
        1 aagtgcccat ttctttcaaa tattatgtca agcagaggtt tacaggacat catgctttaa
       61 aaatgggcat atgttcttgt gcatctttga cttctaagat gataactgta aaatctttgg
      121 gctttgttgt ttgtatttaa aagccctcaa gcatcttcct tgataggtct gtatgtacac
      181 tgtaattatg catgcattaa gcactaaatg aaaacaaaag gcatttaatg ttaattacac
      241 tggaaagtca ccatattgtg atcgtacaca gcaccactac tgctgcccag ttagatatcc
      301 cactttcatg caaacaacag aaccaaatcg aattacataa aaagaagcta catactgact
      361 cccagcagta tgttttgaca aaacactttg tctacttaaa tgatttcaga tgctgtagtc
      421 aaaagccttg actgcaaata atgggttcat aaaacctatc tttaaaattt tacctgacag
      481 taatgctgtg caaatatctg cacttctagt tcaccttctc cacttgttta catcaggatt
      541 ttaatagagt ggctgtcaca gaacaacagc taaaggccac tgtttgataa gttgctgtaa
      601 aaatagactg tttaaaatga gaatttccat cctaaattca gccatcacaa aaaggtggtg
      661 tttatgaaaa tatcgaagag agacaatttg taggaggacc gcaataaagt ctttttgagt
      721 tcagtgacat tctaaccagt aatgactttg tgagaaacta catttcccat ctgtctttag
      781 ttttgctgag aaatgacaaa aacaaggaaa atagagggat aaaggaaaag ttaggagata
      841 tatagataga tttttggtgg gtttgcttaa gtctccatat gtaatatttg aagaataaat
      901 tg
//
LOCUS       KCKM01000867             771 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13720apa ultra-conserved element locus
            uce-1766, sequence.
ACCESSION   KCKM01000867
VERSION     KCKM01000867.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 771)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 771)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..771
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13720apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>771
                     /note="ultra-conserved element locus uce-1766"
BASE COUNT          255 a          169 c          169 g          178 t
ORIGIN      
        1 catgaagtgc tagctcagcc ctcagttcgt atcagcatta catccagtag gttctggcat
       61 gtagcgcttg ctcagccctc agctcatatc agcataaaca cttcatcaca gctgacacgc
      121 tgatatgcta aatgagtaag tgcggtgcac aaagaggtca cagagaagtt aactaaaggg
      181 attataaggg acagtcaaca cacttcaaaa agaaaaaacc tgataggtgc agaaaacatg
      241 gtaaatgagc ccgaagaatg caaaccctcc gccgtgcact ccattacagc tctgacagtc
      301 cagttccaaa cagttaaata tgaaactgtc aacaagggcc tgtcttaata accaaacttg
      361 aggcctttta tcctggaaga tttatgaagt aattttaaag aggcccaagc aaacatctgt
      421 caataaattg aatgccggct acaggattta caagcaagac aagaatttct cattaagtgc
      481 acattagcac tgtggggatc ataaatagta agagggcagg atgctgagcc tctcaagctg
      541 tcattaaaac actatctaag aactaatgag gaagtgatgg aaggatacta atgatccctc
      601 aggctccttt cattcagcag tgaaagagga gtgtgcaata cagagtttca gcgtgccatg
      661 accaaaggtc tacggtacag tagggaggtt ttcaaagaac atcccaacct ctgttgcaca
      721 tggaccctga gagttcactg gtggaccagc aaagacatcg tcatgagctc t
//
LOCUS       KCKM01000868             700 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13736apa ultra-conserved element locus
            uce-6626, sequence.
ACCESSION   KCKM01000868
VERSION     KCKM01000868.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 700)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 700)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..700
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13736apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>700
                     /note="ultra-conserved element locus uce-6626"
BASE COUNT          225 a          123 c          132 g          220 t
ORIGIN      
        1 aaaccttgaa atttcagaat ctaattttat gtcttcttgt ttagacctgc tctattaatt
       61 acaatataat cataataaaa aggaatactg catctttaat gatgtttttg tgcctgtgta
      121 gttaagcttt aatgctaggg aaaaaaaaga ttaaattagc cttgtaacct ctttctcttc
      181 cagactgatg atggaaaata aaagctctta gccacagaat gtaacactta gaattaatat
      241 ttaattagac cagcaaattg tacaccgtgg ctgaaagctt ccaaagagtt gttagtgcca
      301 caattgacct acaagtttaa taataactca cttctaggag caagtgccag ttcagcatag
      361 tggagccact gtaagaaagt cctgtgagat taaaatcagc aaaccaaatg gcaggcgagg
      421 attcctggga tggagccttc tggaaagctg ggagctggag tagcttttca gccaggattc
      481 agatgagaac agtgggcaaa aaaagctgat ccctcctgtt ctgggagctt ctggttgtag
      541 gccaaaatcc tagaacagat tttttctaaa tgttcttacc gcagctatta atttatatca
      601 caaatcacgt aatgagtgac ttatcttcat tttttaatta cgttttaata caaacattat
      661 tgctgaactc tctggtcatg aattttgctc ttgagagaat
//
LOCUS       KCKM01000869            1079 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13751apa ultra-conserved element locus
            uce-5451, sequence.
ACCESSION   KCKM01000869
VERSION     KCKM01000869.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1079)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1079)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1079
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13751apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1079
                     /note="ultra-conserved element locus uce-5451"
BASE COUNT          320 a          224 c          229 g          306 t
ORIGIN      
        1 ttatgtttct gtgtaagcga tcactgcagc ttcccacagg gacagtgcat gatgccgcgt
       61 ggaaggagag tgggttggga ggaaagctgg tccttgaggt actctctgag ggcttatcta
      121 tacagagtgg ttgctgagaa ataaactaag aggtgaattt acaacacctc cactccacag
      181 gtgggcactc ttaacatgca gtaagcaaga ggaaggtact cagtgtggaa aagaagagag
      241 aaaatactcc acacaagcca tgttcctgtg atgatacact gctgtgaggc tgaggtcctg
      301 cagtttcgct ctcttgtttg ctctacaggc agaccttgag acttcagcca cactgtaaaa
      361 aataacaacc cacaaatggc tgtctgggag ggtgtcactg gctgtcacca tggcatagac
      421 agtctcacca actgcagtga aggagccacc cactgtaaat gctggacaac tcttctgacc
      481 tgttaatagt tggcagacta tttgatgaca gttgcaagaa tctgatgcac agcagtatcc
      541 tttacagcag tttaatcttt gtcatcaaat cccccagcag ccatgattaa tagccacact
      601 tgagcttgtt ttgaaagttg tatatttggc agctatgaac tttgatctat ggtttcgctt
      661 taaagaatca ttatgacaca aacttttcct gtaatccttc cctctaatta aaccacacac
      721 aaatactatg tggggaaata tgatgctatt gatataagct gtgtgtttat tacaatgttt
      781 taggcacttt attaaagtgg atagttgttc ccagcaagat agtagataag ctccccaaaa
      841 caataacatc acccagaaag aatatgtaag agaatttccc aaggccaaat tcgattagag
      901 actttctttg ttgattaata ccgagccctt gaactcgtta agggctcaga tgttttaacc
      961 tgagctaaaa ttactagcat ttaatgaatc taccctacta acgtgtactt ttccacaaaa
     1021 agtttgcctt tgtaccagat agtcaaagga cttaaatgtc taatgtggca gtgtctgtc
//
LOCUS       KCKM01000870             569 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13766apa ultra-conserved element locus
            uce-3084, sequence.
ACCESSION   KCKM01000870
VERSION     KCKM01000870.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 569)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 569)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13766apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>569
                     /note="ultra-conserved element locus uce-3084"
BASE COUNT          170 a           98 c          135 g          166 t
ORIGIN      
        1 ttacatttcc cttcaaagca cgcgatgcaa atttgcttgg aaaaaccgcg agcttggtgt
       61 gagaatatgc tggtgcgtgt taacgttaag ggaaaaaaaa agcagcagca ttttttgagg
      121 tgtaattggt agagaaagca aataagcttt gtcagtgggt gatggggagc aacggcaggc
      181 tccaggaccg gcgccggagc agatgttctc tacctgcctc gttactaatt tcaacaagtg
      241 ttcgccttct agctgctgcc agcaatggca tggtttgtta ccatgagcaa ttttcttaat
      301 taacagacat taattagcca tttagcaatt ttgcaagcat ttgtttagca gctttcctaa
      361 acatgaatac cactgtgata atggtactga ttagagggtc ccctaattaa cagtacaggg
      421 aaggaaaatt gaaatcacat aaattaaaaa gggaggggaa gttaatgaag gcaggacata
      481 tttgcacctg caaatctttt gtacggcaga aacttgagtg caatgtaaat aaagtaagag
      541 ggtgggtttt tctcctcttt ttttttttt
//
LOCUS       KCKM01000871             592 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13782apa ultra-conserved element locus
            uce-7690, sequence.
ACCESSION   KCKM01000871
VERSION     KCKM01000871.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 592)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 592)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..592
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13782apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>592
                     /note="ultra-conserved element locus uce-7690"
BASE COUNT          190 a           96 c          102 g          204 t
ORIGIN      
        1 tgttctttgc ctgagggcat gtctcaaaca gcagttttta ggggaaattc ttagaaataa
       61 ctagaaatag taagtttccc tagttctttt tgttagttga gatcatagaa actacctttt
      121 ccaatgtgat agtcatatct gtatttcatt tataaattca actgtgttac agtgtatatt
      181 catatctttc tagagtaaat tacaggaaat aaccatttgt cttcattgta gacacttttg
      241 tatgtatagt agaaaacaaa cctctactca ataacggcac agaggcacca ttaaaatcaa
      301 atttacagta aacagaacct gcagctgggg taaaacacta actgttagta ttttaattat
      361 cagcgaagct ttcggaggtc taacatctgc tcatagccaa atgacagcag ctgcttgtgt
      421 acacttaaaa caatgtgaat ttcttctata aatattaaaa tgaattgtat gttgtgtgtt
      481 cattgtggct atatttctat taagctcttt aagtatatag ggtattttaa acttctttct
      541 tgtggccaat tcataaaggg ctgacctctt caaaggaatg agaggcaaag ac
//
LOCUS       KCKM01000872            1100 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13797apa ultra-conserved element locus
            uce-2612, sequence.
ACCESSION   KCKM01000872
VERSION     KCKM01000872.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1100)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1100)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1100
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13797apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1100
                     /note="ultra-conserved element locus uce-2612"
BASE COUNT          310 a          221 c          244 g          325 t
ORIGIN      
        1 gttccccggt tttctggtat actctgctcc agtgagtaac caactggccc gttttctgtg
       61 tgtgaatgct taatgcagat gggtctgaac tactggctgg aaagcctgaa aagaaaccca
      121 ctctgttaca cagagcgcct tgttgcttgg tttccagtaa ggtatgctgg ctttttaaat
      181 aaactgtcaa gtaaaacttg gcactgaaaa taccaagtga gtaactgcct ttgtagaaaa
      241 gctgacagct cagctgtgca tcagatagat agctgcccaa gactgagctc gaaaggctaa
      301 cgcattctac ttggaaaggt gccgtcgccg cgaaatgctt ccttttggat ttacagctgt
      361 gaaacgcttt ggggtgatct taatgctagt taaaaggcta ctggctggca gtttacctcc
      421 ctctctgcaa gcgttggttc tcgaattaga aagtttggag gtgcaaaaac ataattggaa
      481 aacttttttt tttccccctg cttaaagggc taattgattt cacaggtgtt taattatcat
      541 ttgctgtgag ataatacctt gtagtgccat aaaaaatgga tttaattttc aagtgcttgc
      601 aaaaccattg ccaaagccaa gttagagcta aagctagata attattctat aaatcaaaca
      661 cagtgcctcc tttttttgaa atttttaata cttggctata atgatatctg acgaccttga
      721 aactaacata aaaaggattt tcttgccaag tgcagaaagg cagatttgga gtatttcttt
      781 cagtctggtt cattaccgca gccaccactg ccacgctgtc ctggctgcag gactccaagg
      841 gatgctatgg tggaagtaca gcagcattat ctgcaaacag tgatttcggc agaaaggtaa
      901 cagctgagta tgggtatgag cgtgagccca gtcagaaaat gctgctaaat taatgaaaat
      961 cctgcatgat tcttctgggc ctggcagtgg aaatgaaact ctgcaaacat ttagcactaa
     1021 tgtcaaggca caactgtttt ctcctttctg tgccagcatc ttcttttagt tcagaaggct
     1081 gcataacagg gaagtagagt
//
LOCUS       KCKM01000873             571 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13811apa ultra-conserved element locus
            uce-1072, sequence.
ACCESSION   KCKM01000873
VERSION     KCKM01000873.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 571)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 571)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..571
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13811apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>571
                     /note="ultra-conserved element locus uce-1072"
BASE COUNT          205 a          125 c           92 g          149 t
ORIGIN      
        1 aatgcaaata cattaaaaaa atacccaagc caattaagac acaagtgttt aaatacatga
       61 gtagtaatta caaatgtatt attcatacct aatttacaag atgaacttct ttcagtaaaa
      121 tattaaactg tttacatgca ttcgggaaga caatttccca acccttcacg tcctgctctg
      181 aagcggtgac tattgctatg caacaactcc gcagacttac agtgtacact atggagtaat
      241 cagaaaatgt ttgacctcag atatctactt gaccccacag aaatgcagac tcgctcgcta
      301 taaaatccta aacaatgggg cagacaaggt cagagggtca aagcaagtat taacaggtca
      361 ttgtgcaacc cacttgggag caattacttc tggtcacggc taagtggaca cttgattgaa
      421 taccactaag acagctcaca tcccacagat aacaatcctc acagcgatta agaattaaag
      481 cccccatgat tcagccttta ttactcaaat gaacctaact attccataaa aaactcttgg
      541 tatatgcatg atgcaaggtc taaattgaaa t
//
LOCUS       KCKM01000874             974 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13827apa ultra-conserved element locus
            uce-4885, sequence.
ACCESSION   KCKM01000874
VERSION     KCKM01000874.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 974)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 974)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..974
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13827apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>974
                     /note="ultra-conserved element locus uce-4885"
BASE COUNT          274 a          198 c          181 g          321 t
ORIGIN      
        1 atttctctct cccggcagcg gtctgctctc ctcgctacac cagagagaaa tgcaatagct
       61 tggctaaggt agacagagca aaatacagag aatagttgct ccagggcttt gaaacccctc
      121 aaggcaagga tcaggataca attagctcat gtctctacct ccagtctgaa tcaatctccc
      181 aaataaaagt taaattaaat taactgatca cacgggcata aaattgatct ccttcgaaac
      241 gtgcatatag atatatatat attttttttt gccggttttt ttggtggaaa aaacagtctc
      301 attccagcct ccaacttgct ttttactctc ctcttgcaca gaaaagctga ttttaatcgt
      361 tgtgattagt tttgatgtaa cgtttccgcg ggcgatttct gcaaatggat ggagtgtttc
      421 tttgccagaa gagggaaaag cagcagatga tgataattat aaggattgtt ggttgtttct
      481 ttctttcttt ctgtctctct cttccttttt atttgtattt agatctgtct cttcactttc
      541 ccgagttgac ctgacattgc cattgcacta aggtcgcaca acttgttgat taggatcacc
      601 tcccgttttg atcgagggat atgtgttaat ttggcagtgg agcaaacaca ttttctgttc
      661 ccttggctat ataacttcgc aaatgacgtg tataaaaata agcacatgga gtctgctttg
      721 ccccaatcaa gtctgaatca atgcctgggg gtgatacaca aactcatttc aaatgttcaa
      781 ccatgcagaa ttgcaaaaag attgaaggag ttgcactgca ttttttattt ttttttttaa
      841 agcagcaaaa ttaaaagaaa acaaatccat gtaagcaaat ccaggaattt accacttagg
      901 ttcatgtgac atcgcttgca aatgctacta actttgcttc tctaattatc cgactgaaat
      961 tgagtcttgc cttt
//
LOCUS       KCKM01000875             481 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13843apa ultra-conserved element locus
            uce-4818, sequence.
ACCESSION   KCKM01000875
VERSION     KCKM01000875.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 481)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 481)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13843apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>481
                     /note="ultra-conserved element locus uce-4818"
BASE COUNT          114 a          112 c          116 g          139 t
ORIGIN      
        1 gcgctcgccc tcttcccccc gctccccggg aagcaaaggt caccgcttgc gcccggtccg
       61 gttcccggcc gctgccgagc tggaaatcag gaagcagcgt gccctatttg tcaagcgttt
      121 gacagctgag ttcattaagg cttaaataag aaggaataaa agtaaaaaac gcttacgtac
      181 cgggcgtctc tttttcggca gctaccaaag agctaggtgt gcagagagag ggactgcacc
      241 ctttgtatat tatattcttg ggatctcttc agttttcaag tctgatagag tcctttgctt
      301 ggcagattaa tgacgactcc gtgtttctta agggacgtgc tgaattaatt atttcgcaaa
      361 tcacgtggtc aggacttgta gaaatctatt cttatcatct tccttgcact ttgaaattct
      421 gcctgttatg actgttccta ccaagattat tttggtctct aggcttgggg gaaaggaaag
      481 a
//
LOCUS       KCKM01000876             815 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13859apa ultra-conserved element locus
            uce-7460, sequence.
ACCESSION   KCKM01000876
VERSION     KCKM01000876.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 815)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 815)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..815
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13859apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>815
                     /note="ultra-conserved element locus uce-7460"
BASE COUNT          226 a          189 c          163 g          237 t
ORIGIN      
        1 gcattcatat acatctttgt cagcagtatt tcggtaatgt tccatttcct gtatgaattt
       61 ttatatttgc agtgataaga tgcaaaatac cacccggcac tcacagcaac ttcagcttcc
      121 cactctctca catcacaaga tttttgtact acatgaaagc tagtatcaaa atttcatgtt
      181 tgtagttaca gattaaataa tattaaacac tattacactt gaaagatttg tttccaagta
      241 gcaaatagat tccccatatt attctttact ataagtagtt gttgttatat cttattcatc
      301 tggaaaataa tttccaacag ccatgaaaat agtggatttc tctctgttaa aatgatagtc
      361 agagcctggg ccgctgacat atagtaacat gattcacttg gacagttact gactgcacat
      421 ccaattcatt tcttctctag agcaccaagt tattatctga aatgcacaag gtgtctgggg
      481 gtaacatatg atcagccagg gacgcttttg acggcttgaa gagcaatcaa taaaaattgt
      541 ctccagcagt tttgtggagt atggaagttg gtggtgaaat gaagtgatgg agattaacta
      601 gtggaagtca atgccccggt gctgtgaacc ctgtttttta attaaagatc caaagctgct
      661 gcttgctcaa acagggttcc ccctcctgta ccagactcgg cgccgagggg acatttccct
      721 ccctgctccc cgtgccccgg agagagccct gtgggaacca gagcggtccc tgccccacac
      781 agcccccgcc accacggacc ctggcagcgg ctcgc
//
LOCUS       KCKM01000877             406 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13875apa ultra-conserved element locus
            uce-2992, sequence.
ACCESSION   KCKM01000877
VERSION     KCKM01000877.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 406)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 406)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13875apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>406
                     /note="ultra-conserved element locus uce-2992"
BASE COUNT          138 a           65 c           82 g          121 t
ORIGIN      
        1 attggctggt gatacgatac tcgcagcgta agtcattaca ggtctgacgt tacagttgtt
       61 acacattgct gaatctgtca aatgaaaagg gagcacaaag ggaatttcca aatgcagctg
      121 cttatttccc atttgttaaa tccttttatt acaccatata agtacacagc tgggaaatac
      181 tatagagtgg gagttaaaac aaaatatttt ggcttccaga cattcagaat acacaaagga
      241 ctcagtggaa agcaatgcct ggtatcaaaa gggagtgaaa gtttgaaaac atttctagcc
      301 agtgtggggt tttcatgata atacacaatg tagtttaaag gtatcttata ttacaaaaag
      361 tactgcatac cataaatgtt ggtaaaattt ttttagtcag attgcc
//
LOCUS       KCKM01000878             896 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13890apa ultra-conserved element locus
            uce-6157, sequence.
ACCESSION   KCKM01000878
VERSION     KCKM01000878.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 896)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 896)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..896
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13890apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>896
                     /note="ultra-conserved element locus uce-6157"
BASE COUNT          249 a          225 c          184 g          238 t
ORIGIN      
        1 agtacgagtt agacaccaga agaagtctac ttgtccaaag ttgaagcgca ccaagacaga
       61 gttgcacacg caaggacacc tacaaacgtc aaagtcagaa ctcaggtgcg gcaccccctg
      121 gaacagagcc ctgacgtggg acggggagca gcacacaccg ctgggcggcc gcaggacatg
      181 cacagctgcc cgagccaccc agcgtcctgc tcgaaaggca ccgcaggccc tgcgccgccc
      241 tcgactcttc ccggcttgcg ccagtttgcg ccacgtttcc agcgtaatcc ccgcagtgcg
      301 ctgtacgagc gcgaaggctg cccttctaac aattccagtt tacgacaaaa gtgttacagt
      361 ggttcatatc aacgcagctt agatctcaac cagctcacgt aagggttaaa aatagaaagt
      421 gctatccact ggtttgctct gatgttcctg cagatattgt cactggatgt atcctcagta
      481 gaattctatt caacacctct gtctttaagt acaaagctgt aggctgtagc agctttagga
      541 aacataagta tccttttttc tgctgcacag tatctgtgtg tgaaattctc taaaggggtt
      601 taagtattta ccctgaacac tatcagacag tttctaaaat tttccttatc ctgttgcaaa
      661 aacacttcaa agagaatcat aaacacagtc ctttgtgctt tcagcacaca ctttgttttg
      721 gaagcctaag tctgaattcc ctcagaattg taaatatttt tttgtgaaag atgtgcaata
      781 caactttact tttttttctt ctttcaaaaa gattggtagt gattctacta cacacacaac
      841 agtgaagcct ttctctcatt tctgacagct ataaatattc ggaacaagca aattag
//
LOCUS       KCKM01000879            1015 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13934apa ultra-conserved element locus
            uce-5822, sequence.
ACCESSION   KCKM01000879
VERSION     KCKM01000879.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1015)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1015)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1015
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13934apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1015
                     /note="ultra-conserved element locus uce-5822"
BASE COUNT          328 a          208 c          191 g          288 t
ORIGIN      
        1 aaagtacagt tgaaaataat tcccattaag tagacctgct ggggaaaaaa gctgcacaca
       61 ccaatgatta agggtgaatg tgcatctgtt ctttaaacat gcatagcagt aatagcttaa
      121 aattaggagt tcaagccatg gccagccttg ccacatatag aaaactgcat cgggcaatgc
      181 taaattaaga agcacctccg ctaggtttac ggaagacaaa ggattggttg taaacgcctc
      241 tgcattgcaa agatctcttt tgtctgccaa tcaacaggga agtattatcc caccatcaca
      301 aaaggcaaac cttcggaggc agtataggtc tgtgtgttgt gcaaatgtgc agttgctaag
      361 aagcaaatat gcttctcttc taatcaaata gcccagctca gcaatgctgc tggcttgggg
      421 caagaagcaa attccaccag ccacaaactt agaaacagtc ttgaattatt tgttgctgac
      481 cgctggctga accctgtcct gatgagcacc atcaccatta gccacttctc agtgtattcc
      541 atcaaccaat ggcaatagca gcatgctaca gctcaggctg caaggaattg atcaaacagg
      601 gtaatgagac tatttcttca tggaggttat tttaaatgaa tataaatatt ttctttctac
      661 ataatttgcc acaaaaggtc actgaactcc ctgcgattct aaagaaaaat gctgtggtat
      721 cccccttata tatttgagtt aggatatagc caacaaacaa ttctgggcat ttttgatggt
      781 cgtgtaaatc ttaatgaggt ggcatcccag acaattgatt agcggcaata ttttatcttc
      841 acatttagtt acgaacaaaa agaagatttg aagctatttc agaaaatcat gatataccta
      901 cacccttaaa atctttcatg agagaatata ttccgtgaac ctaaagactt acacttttac
      961 tattagcaat agatcacgca tatttagctc tgcttgccat actttgatat tatag
//
LOCUS       KCKM01000880             917 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13950apa ultra-conserved element locus
            uce-5123, sequence.
ACCESSION   KCKM01000880
VERSION     KCKM01000880.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 917)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 917)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..917
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13950apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>917
                     /note="ultra-conserved element locus uce-5123"
BASE COUNT          262 a          171 c          172 g          312 t
ORIGIN      
        1 agaatgacaa gcacacgatt gctgtactta aagcaatctt tcacagctgc tttgcttttt
       61 cactgatccc attaaattga cggcatatgc ctgtggggtc tacaatgtta caatactact
      121 gaacacgatg ttgattgtgc actacaaatt tgtacaacac aacttggctt tattgtggga
      181 atcatctccc aggtcatctt tccatttatt ttcaacctga tcaaaattta atttaaagat
      241 ttatctctct ttgtgacctt tactgaacac ctggttatat taattgttta gaagtgcaaa
      301 ctctaacctt agcggttagt aggcatgaaa acctatgaag tctcctcagt tcctaaaatg
      361 agcatgagtc atgtcttttc ttgaactgaa cgaagtagct gtgcattaaa tatgctggca
      421 catcttctgc ttgagcaagt ggaccgaaat ggtgtgaatt gttaatgcct tgctgctttg
      481 gttcacggct tgtgattgat catttgtaac tatatctact ccttgttcca tgaaatcaag
      541 tatggagtaa tgggttcatc agatttttgg gttaaattga gagtgaagag gtactgtgtg
      601 tggaaataag agttgccatg ttcggggctg gccttgtaac agcatggaat ctaaaggcga
      661 tattcaaaac cacttcactc atcatacgct tactgattct gaatagggtc catttgcagg
      721 ggacatttgg tagttttcca atacacttta tgcctctttc tccacttcta ctaccctgca
      781 catttatttt attattattt taagctagaa tagcttgtaa caggtcagca tataaaatta
      841 atagatttaa gtaacttgct atgtaaaagc aagaatagcc ccggaatgaa attattgtcc
      901 tcctactaat taatgat
//
LOCUS       KCKM01000881            1039 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13965apa ultra-conserved element locus
            uce-7479, sequence.
ACCESSION   KCKM01000881
VERSION     KCKM01000881.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1039)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1039)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1039
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13965apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1039
                     /note="ultra-conserved element locus uce-7479"
BASE COUNT          357 a          183 c          184 g          315 t
ORIGIN      
        1 tctttacctg tttcctatta ttaaccccaa aatcattggt cttttttaca aagctatgtg
       61 gctagacaga tggtctggct agcacagtta cgaatgtttg aaaaccagaa gttcttagac
      121 gctttcataa attcagcact ggtcagttaa atcacagctg tgatttgttc taattttttc
      181 attacatttt cactgaacta gaagccacag actaaacacc ttcctataca ctgtgttaac
      241 attgggaaaa catcaaaaca tattatatgg acataagcaa aatgcacgaa tggtacaata
      301 aaatttggct ttaaaaaggt tacacgcacc ttctaaattc tgagtataag gaaaccaatg
      361 cagtgcaatt atgccagaaa agccacgggt gcttataaaa cgctgcgcag ctgttggagg
      421 agagggttac agtgacaaac agcttccctg ctacaaaggt ggcaggaaat ctatcaaact
      481 ggacaataaa attgcaattg agtttctttg gctttttata gcagctgcat gtatcttgat
      541 gtgtagctct gcaaaaccta tccaattctg taacactagt cctttatgta ctagttcttt
      601 atcatggagt ggtgttataa attagtggcg agaatggcgt gaagggttgt aaaaaggaaa
      661 aataagcagt aacccaatac aattagagat gaaataacaa aaacccaaac tggttattct
      721 cttagcaatg ctaaggaaat atttttgttc ccataactcc cacattactt tgaaagcacg
      781 ctagaaatca aaaacatctg agatgcactt agcatcgaac aatttgccca ctgagttatg
      841 cctacactat gttatgtgtg aatctatatg aacctcagta ctggtataac aggatacaag
      901 aagattcaaa ataagtagaa ctagaggggt taaaaattca ttatcattag atattaataa
      961 ctatttataa ggacattttc aagcaatcag taaggtttta ccacaaagag gtttttttta
     1021 atttatccta atttatgat
//
LOCUS       KCKM01000882             682 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13981apa ultra-conserved element locus
            uce-2646, sequence.
ACCESSION   KCKM01000882
VERSION     KCKM01000882.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 682)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 682)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..682
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13981apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>682
                     /note="ultra-conserved element locus uce-2646"
BASE COUNT          254 a          125 c          145 g          158 t
ORIGIN      
        1 aggaaaaagt ttaaaaaaaa agcaaaagga taaaaaaaag caaaaagaga aaaaaaagta
       61 aaaataaaag aaaaagagaa gaaggaaaga aagaaggggg actgaatagg agcaaaggaa
      121 cgaggtgaaa accaccctgc ttgtatcaac gcaaatgagg cctcactgca ccagcatgca
      181 tgaagcgcga ctgtatattc catacacgag acagttaaaa atttgaacat aaggtagcat
      241 ttcctttatc atatcccata aaaatagcaa tttgctaaag cccttgtagc acagtatgga
      301 aggtggtgta ttttactgat aatgtagaga tgacagatag tcctatacta ggaggtttca
      361 atggtgtctt gctgtatagc ataataaatt gtgaggagca gagacagagg acagtgcagg
      421 cgctgctcca cctccagtag ccaaataatt cagccccggc tcagtaatta tgctgtgtga
      481 aaatatggga ttaattagac tggtacacta acacactgta gtctcattaa aggctgaaca
      541 gcattttcat agatactgcc acttgaacag ggctgctgct aatgtgaaaa gacaaagtct
      601 cctcttttca cactccttgc ttattatctt acttaaggcc acttaagcaa acttccaaag
      661 gcagcctggc agaaagccct tt
//
LOCUS       KCKM01000883             685 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 13996apa ultra-conserved element locus
            uce-2003, sequence.
ACCESSION   KCKM01000883
VERSION     KCKM01000883.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 685)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 685)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13996apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>685
                     /note="ultra-conserved element locus uce-2003"
BASE COUNT          205 a          125 c          131 g          224 t
ORIGIN      
        1 aatggtatga attgctcctt aaatacaata acggaacaag ttgtgcccgc tggcagaaaa
       61 atgactgtac cgagcgtaag attaaccttc attcgcagca gatcttgggt ttgctcggag
      121 agccgtatac tgcaaacttt aggtctctga ttaaacaaag taggggctgg atgagatcaa
      181 gatgtgcatt tcccacattt aaccagatca ctgaagacag ccgacaagga tgtgaaaagc
      241 cagatttcca gcaaaattaa atgaaaagtt ataaggctgt gggtttagga atggcctttc
      301 ttttttttgg tttagtgtat tatttgtcag atttttataa gaacattatt gctttaagaa
      361 aaaaacctaa accctgagaa attactctca gtctaacgag ttcttttcca ctgactacag
      421 acatcattag gggatggcta tagcccgagg ctgtgcatga actttttctt ctaactgtac
      481 actttatgta taatttagct ttcttgcctg aattattcaa gcaaatagtg agtgaaaata
      541 atggagttca ctgaaacctt ccacagtatt aaaataaaac agttttttac gttgatttga
      601 atttttaagc tttttaatca tggatttcaa atggaatccg catgtcttca gctcttctct
      661 gcttgtcccc ctgtgccttt tttca
//
LOCUS       KCKM01000884             401 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14012apa ultra-conserved element locus
            uce-4473, sequence.
ACCESSION   KCKM01000884
VERSION     KCKM01000884.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 401)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 401)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14012apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>401
                     /note="ultra-conserved element locus uce-4473"
BASE COUNT          125 a           64 c           48 g          164 t
ORIGIN      
        1 catattgata tgtcgatatg tttttcaata aactttttca cagagttttt tttaaattct
       61 cttcacttta aaaattataa ttatatgtct tcctcccact ttgaaaatgg cacaaggtgc
      121 tcatttgcag agctctactg ttcaaatctt cactgagaat agaaatgtca tgactcagtt
      181 aacaatgctt tattattcac attgatcttt ttttatagtg ttctttatct caaaaacatt
      241 gtaaatcaga tatcttcctc ccactccttt gttcatttgc aaatttttat tattctagtt
      301 taaaaaagca atggagtgtc aagagtcact gtatattgtt tatgttcttt tttgctttaa
      361 aattactttt aactataaaa agtaagatgt acagcaagaa a
//
LOCUS       KCKM01000885             649 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14027apa ultra-conserved element locus
            uce-4549, sequence.
ACCESSION   KCKM01000885
VERSION     KCKM01000885.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 649)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 649)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..649
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14027apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>649
                     /note="ultra-conserved element locus uce-4549"
BASE COUNT          189 a          151 c          127 g          182 t
ORIGIN      
        1 acacaccacg aaaaaaaata caagcaaaca accgacacat tagttaagag accttccatt
       61 ttactttggc agttcacgat aatggaattt aattgtggaa aaagctgaat aattttagct
      121 gaatgtcatt tggttcattc aaactgggaa tcagggacat ttttaacaac ggttttcaaa
      181 cttcttttga aatcaggaag ctgctgcgca cagataaggg gagaggtttg aggattctct
      241 atcagaaatt tcaaggtttt ttccatctgc tttttcacat taactggtaa ttatccagaa
      301 aggcacataa tagtgcagaa atgacagaag ctgacaaagg ttttcctaag atatgtaaat
      361 tgtcagtgat aggcaaggtg caacagaaag gctttctaca gcacaattat ttatgccagt
      421 ttcatttgct tttcggtggc accgacggcg cccgccaccg ccacgtttat catgggcccc
      481 gcacatcccc tgccccacca gcacgacggc aaaactgagc tggaagcttg gtgatctcct
      541 ccgagcccgc tattttatat taaatacggt gcctgcgtcc gcctgcacgt atagtcttgt
      601 ttattacacc gttcccctcc attttcccac tgaaacagct tccacatat
//
LOCUS       KCKM01000886             504 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14043apa ultra-conserved element locus
            uce-278, sequence.
ACCESSION   KCKM01000886
VERSION     KCKM01000886.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 504)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 504)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14043apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>504
                     /note="ultra-conserved element locus uce-278"
BASE COUNT          148 a           83 c           88 g          185 t
ORIGIN      
        1 tgtctataaa tacgctgcat aaccaaactt ttctaaatga agtgctgcag ttctgcaagt
       61 gaaataaagc agttgctgct gaatgcatac tgtaaagaca agtcttataa tgctcttcat
      121 ttgttgaggt ttctttgcat taattaagat tgggaaaaaa acaagtattt taatgtgacc
      181 ttcatttggc atttgtttta acttttcttc tcctatttta tttaattctt ccacttctgt
      241 tgttcaatta gtgtttgacc cctttagcag agatgtaaat taaatgacat ttcaatgcca
      301 tcccatattt aaaatactgt gttagttgtg gatcataaag gatgatcttc gttctttagc
      361 taatttattc atttaacaat ttccctccag aagttccagc agaaggctct gaagcaaact
      421 aagcagaaga aatccaagtc ggctgaattt ctgatgggtg agccttgctt gatgagttat
      481 tgctcataat ttgtgtaagg atta
//
LOCUS       KCKM01000887            1062 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14059apa ultra-conserved element locus
            uce-2503, sequence.
ACCESSION   KCKM01000887
VERSION     KCKM01000887.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1062)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1062)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1062
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14059apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1062
                     /note="ultra-conserved element locus uce-2503"
BASE COUNT          325 a          187 c          203 g          347 t
ORIGIN      
        1 ttatttgtgt aggagacctc cgcaaaacaa gcaacagcaa tatgaaacac cccaaaaaat
       61 taaagctaaa atttgtaagg tctagctgta gatgtaaggt taagcagact ggaacagtat
      121 atttgtttta agtgctttct ttcgtcatct ccgttttggt ggttttacag agatttatcg
      181 tgagcagaat taaaaagttg tgcaaggttc agttatagca agagataaaa ctctaggctt
      241 tcaagtgact tgtttgtatg catttcacat gctgttggtc tgtaggtatt attaatatct
      301 atttttagaa tcaagattgt gatgcacagg gtacgtaggc acaatgtgat aaaaacacag
      361 caatactgtt tcttttccgt ttcattataa agtttctttg accctgtggt ttattttcaa
      421 acatacaagt tatttgttct ggtgtattct taaacagggg ttgtttttct ccctttcaga
      481 aaatgagcac agatggtgat tgatttttca agtgctgaca tccctgcttg agaaaatgtt
      541 cccaccttct ttgtgctgag caagtcaggc aaactaacat gatgatgcga tcatcagttt
      601 catgcagaca tgcagaattg attgacaggg aaaattttaa cataaaccac acattcttcc
      661 agtgtcttca attttttaat gatgtttatt tgcaggatat tagcagcagt ggggatttaa
      721 tttaaaagac accaaaactt atttcagcaa caaggttaaa ttgagaattt tgctgcacta
      781 gcccagcaca tatcagtaca atttgtaata gctcttctga gccagttctg aagctaaatg
      841 ctgtcactgg ctaactagcc attctcaggc cattgcttct gtttgcgtga ctaaatacat
      901 acaattaaag cctagcactt tcattctcta tgaactcatt gttatccagg gttcaagtac
      961 tcagataatg ggccagaaga aaacaggcat atcatcaacc cacagtggca gaaaactggt
     1021 tggtaaaata catttctcat tatctgatgc agaatgaatg gt
//
LOCUS       KCKM01000888             895 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14074apa ultra-conserved element locus
            uce-4881, sequence.
ACCESSION   KCKM01000888
VERSION     KCKM01000888.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 895)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 895)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..895
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14074apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>895
                     /note="ultra-conserved element locus uce-4881"
BASE COUNT          241 a          192 c          207 g          255 t
ORIGIN      
        1 gacttggcag tgttacctct agcagtgcat ttgcagatgg tatttagcag cgtcagcact
       61 ctatctctga aggagattgt ggaaagcagt ctttttcagg ttttactgag aagggaatgt
      121 ttgactttga tcacagttaa aatgacggca tactcggtag acaaaatact gcagatactt
      181 agaaaaggca actgctttgg agtgcgtcct ttaaactcaa atggatcagt taattctcta
      241 gaatatttac tgggagaagt cctaaaaggg ttaagaagct gctataagaa aggctaaaaa
      301 tgatagactg gaagaaaaag aggtagtaaa aattgaagga tataagaaag cagaggaatg
      361 tgactgggga ataataaaat aagagagaga agttaaacca gtgacccttg tcggcagtga
      421 aaagcgggag attagaaaat gtttcatgct aatttccatg gagatttctt taatttatcg
      481 aaaattactt tcttctgctt tgatttgtcc aactgcctgc cccctcacag ctttttcggg
      541 gtggtcctac ccgtcacgcc atgctgaatg tgggcctcgc ttgcccccac actgggccaa
      601 agcgtcgtga gattactgaa gcgtctctga cgtctctatc agcttgtgcc accacaatgc
      661 cctattccct tttttctctt tcgctcgctc gctcgcctct cccctccgta acagagtctt
      721 aggattcctg tcacatgatg gcttcatcgg gggccccttg ctgaagcgtt ttcacttttc
      781 tcctgatccg ttcagcttgg ttctctctgc tgcctggcat atcaaaggag atttgtgggt
      841 cattgagcca tggacgcaga atataaagtc atcagcctgc ctggcagcat caaaa
//
LOCUS       KCKM01000889             569 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14090apa ultra-conserved element locus
            uce-7499, sequence.
ACCESSION   KCKM01000889
VERSION     KCKM01000889.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 569)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 569)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14090apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>569
                     /note="ultra-conserved element locus uce-7499"
BASE COUNT          171 a          107 c           99 g          192 t
ORIGIN      
        1 caataattgc ttttttgata aaatgttttc aacttctcaa tattattttt atagctagaa
       61 attgagcttt caaacaatga gctgggaacc cgcatttcct gcatgtctta gacaaataat
      121 gcactctcga tcggaagaat tggaagaatt gctcctgcct tgtgggtatt atatttttta
      181 atctaccaat aagtttggtt tttctttcat ttttttagtt ttacataaag taattccaaa
      241 ctgtaagcca cgactgacct aactacttat taaaaatgct aatatgcttt tgtgctttga
      301 tgtctggtga acaataaaag ggagagagtt actctgggac actgtaatcc tttatttgtc
      361 actaagttat gacacccagc agagctgtgt gacagtccaa atcaatcatc ccccgtgcac
      421 tgcaggcctt ctctgcctcc tgcagagtct atgcagttta attagctttt tttcacacta
      481 gcataatgta catctgcagc ttcagcaaga aaaagaaatg gaggatagtt cactgggata
      541 cggtgcctta aaaaaaaagt tcatatata
//
LOCUS       KCKM01000890             254 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14106apa ultra-conserved element locus
            uce-3265, sequence.
ACCESSION   KCKM01000890
VERSION     KCKM01000890.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 254)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 254)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14106apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>254
                     /note="ultra-conserved element locus uce-3265"
BASE COUNT           84 a           50 c           41 g           79 t
ORIGIN      
        1 aggtgcctta acaactattt gcgtcgcaga gttcataaat gagcccatca ccctatacca
       61 gaactgctat aattttatcg gaatgaaaac cattctcttt gatctcctcc agttcttaaa
      121 tccagcagtt gtgtattcaa acatcaatgg aaatgtggtt tcaagcttcc tctttcatta
      181 tctttctcaa agataaaaaa gagcagaaga aaaaaaagtt ctgagcttta gagatgaggc
      241 aatattttta cagt
//
LOCUS       KCKM01000891             947 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14122apa ultra-conserved element locus
            uce-1703, sequence.
ACCESSION   KCKM01000891
VERSION     KCKM01000891.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 947)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 947)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..947
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14122apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>947
                     /note="ultra-conserved element locus uce-1703"
BASE COUNT          279 a          188 c          173 g          307 t
ORIGIN      
        1 acatactatt gtcagcagtt attaaattct caacttttta cccatgcaca agagactgtg
       61 caaagatatc taagggaagt atgagttcag cttgctgtcc aaggattatt ttggaagaaa
      121 cattagcggc cgtcccagcc tggcgcttat atctcatttg aaacatctac tcattcctga
      181 ccaacaaaga aaatttcaat aaagtacttt tactggttta acagcagtga gctcctggga
      241 ttgtcaaagt gctcagtctt ttccgaggag agaaggaatc agcagctcaa atataattaa
      301 ccttccattc tcaatgcaaa ctgccacaca caggagctct gcagcctatt agtgaagtta
      361 taacggccaa cagtcagagg caaaattggt caaaaagttg gctgctgctg tcatattttt
      421 agaattatga ttaatgacac taataatgtg gatgattact gatatgtgta tctcctgcag
      481 tttatcatat tgcactggct gcctacgtcc acaataaaca tgatgctatc atttacctct
      541 ttattgaagg caatccttct cttgaaggag cgcattctaa ttactttgta atgttttatg
      601 tcttaaacat tttgcagctc tggaccttgc caactgcttc atgtctacca ttgattaatt
      661 acagaatgtt taatcaaaat ttaaaaccta atgcagtcat ttatgagtgt gctacagtgc
      721 caagatagtt aggctgccgt cccaagcttg gagagtgctg ggttcaaaat taaatcccag
      781 aaatgtggaa gatgccaaag attttacctt gagttatcta agtttaaaat tttagttcag
      841 ttgatgaatg acaggcaccc acccaaaatg agggctcttt cttgtgcaca tgtgtgtttg
      901 catgttccta ttatactttt cttctttaaa cgtcttaatt tctcctt
//
LOCUS       KCKM01000892             923 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14138apa ultra-conserved element locus
            uce-1458, sequence.
ACCESSION   KCKM01000892
VERSION     KCKM01000892.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 923)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 923)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..923
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14138apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>923
                     /note="ultra-conserved element locus uce-1458"
BASE COUNT          300 a          194 c          175 g          254 t
ORIGIN      
        1 gctcagcata catctgacaa tgcagaacct atcatataaa ctaacacata cagaaagaaa
       61 acaggttagg tttgtcatcc agctgattaa gaggtaagga aattaagtta cttggctgca
      121 gtattatctg acttctgtga aacagtggaa gatacaaaag tgacacagac aattctgttt
      181 taataaagca tctataaatg aggtacacac gttcaggtaa tcaacgtgag aataactgac
      241 aaaaaattca gatgaattgt catttccatc gattgttagg agggtgatgg tccttaatct
      301 cgcatcaatc tcaatgtgtg ccactaggac aaaagaagag atgctctgct gagatcagag
      361 cagctttgcc ctctattccc agcgtacaaa tacattgtgt ttgcagatgg gcatgagata
      421 gctgcggaac tgccatgatt tcccaaagct cacccccaca aatggatgaa ataagcagct
      481 atgtgttctt ttgctgtctc cctttgccct ctgtgcatta gcatgtaatc cagaggagaa
      541 ataacatttt ttcaatcact cgcagacatt caattacagg gcaagcagac agctgcagaa
      601 gctggggcag cccaggtcct gtagaagacc cctgacaatt tccacttcat ttctaaccca
      661 caccgcttta ttagtgagga ttacttctta atcctattgc cattgtcaag attatataat
      721 taaactcccc tttcacctct attacagtat gaatgtatta ctccaaccaa tgaatgaata
      781 ataaaagaga aggaaacgca gagaaggctc ttgagaagaa aactcatggt agaaagaggg
      841 ggaaagattc acatacagaa aagccattgc accattcttc cattacttta ttttacttca
      901 ctcttcctat gcaggttttc tat
//
LOCUS       KCKM01000893            1128 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14167apa ultra-conserved element locus
            uce-5542, sequence.
ACCESSION   KCKM01000893
VERSION     KCKM01000893.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1128)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1128)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1128
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14167apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1128
                     /note="ultra-conserved element locus uce-5542"
BASE COUNT          330 a          236 c          205 g          357 t
ORIGIN      
        1 tgataccatg ggaaaaggag atttctgctt tcatgcctct ttataggcag ttttacaaga
       61 tagccatata catatttagc gccgctaccc gtgccgctct ttgttatctg ctaagcagaa
      121 cgtgttattt ttccagcaac gtataaagca ggcaaatggc tgctcatcat cttttttcaa
      181 gaatgttgta catacaattc tctcctggct aatagctcct tctattgtcc atgatttatc
      241 attgtcagga ggctttacgt ttcctcctta tctattttgc tggaaatctg tccattttaa
      301 acggacagcc tggatttgat tatcctatgc agcatatttt catgtaggct aaagcatgta
      361 ttgtcttgga acatataaga gtgtaacttt cactagtaca tttttgcttc agttccttct
      421 ctttctgtct ctgttttttc aactctttta aaccactata aagtaagtat caaaggtatc
      481 ctgggtaatt agccattaca gtactgtcac agaggcttct gcagtcaata cagagataat
      541 ttgggcaatg gtgaatgaca gtgttgtcca gacttttggg ataatcaagg acacatccag
      601 ctgtaccaga catctgtcag actcatgaat catttcaagt agctttgcaa tagccaggca
      661 actcgaggaa agataaacat tccagcagcc cacagccaca ggaaaaatac tgctcctacg
      721 cgaaaacatt tacttgctca gtgctgcgag cctattgttc aaagcagaag aggtaccaca
      781 tgcttctttc tgattttgga agtggcacac atttgtaaca ttacctactg tagtaagaca
      841 atgactgaaa tagtgttccc tgcacataca cacatatatt cattcgaatt actggggcaa
      901 aaagagagca atgggaaaag tcatacaaaa cccccaagga ctgaagtaat cttggtaaat
      961 gcaactcttt caaataagag tatttgtact gaatacatta cttgtatgtt ttctagattt
     1021 tgcgtgcata cagtgagact gttacttgca ctaaatgaac actgagatta ataaggagca
     1081 aaaaacctcc cttgtacttc cctgctgctg tcactttatt catattac
//
LOCUS       KCKM01000894             826 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14198apa ultra-conserved element locus
            uce-1514, sequence.
ACCESSION   KCKM01000894
VERSION     KCKM01000894.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 826)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 826)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..826
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14198apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>826
                     /note="ultra-conserved element locus uce-1514"
BASE COUNT          203 a          174 c          176 g          273 t
ORIGIN      
        1 gtttaagagg gcagcactaa ttggacaaca gtttctggac tctcttttca aagcacttaa
       61 atgataaatc atttgccaaa gatggataat ataaataaag tgatagatta gctttccctt
      121 tcctatcctt tcttttgatt ttacaaacag ctcctatgta ctgtctgtgg ccagaaagcc
      181 tgtattacta tggagttaga acactgttat gtctgtttac aatgatttgg aagacaagag
      241 gggaaaagtt tgaatcaaca aatatttcct acattcctac tggtaactcc aaggccagtt
      301 ttcagggtgg gccccccttg tctgttacaa gttatgatgt gtggatgaag gctttttccc
      361 atgcagtaat gactgtatac tgagatttca aggggctgtt catgacaatc ccattttctg
      421 tgtaatttca tggttgtctt cttgaatgaa gatattggct gctctgaagc aggaggtcag
      481 atgctcctgc tccctttcag tattgttccg gagtatgttt cctttcagct gatgaaaagt
      541 aattcatcat ttacaccctt gaattctgcc agcgtttttt ttttttttga acaacttttc
      601 tttccctgtg gtaccttggg cccatgaaag agataaatag gttcaatacg acgctgggcc
      661 caggatcctg ggagcaggtt cggcctcgga ggctctaagc tgcccctttc tcatgatgga
      721 gtttgtcacc tttctacctc tggaagtcaa atcctgtcga ctcagccatc tctcagcctc
      781 tctgaagtgg ctttggcacc cactggggca tgtgagctta aaattg
//
LOCUS       KCKM01000895             681 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14213apa ultra-conserved element locus
            uce-377, sequence.
ACCESSION   KCKM01000895
VERSION     KCKM01000895.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 681)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 681)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14213apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>681
                     /note="ultra-conserved element locus uce-377"
BASE COUNT          215 a          126 c          102 g          238 t
ORIGIN      
        1 gttcttatat gagtacttta cagttttctt tatcgttaac agattgccta cacattcctt
       61 gcagtatgtg ggctccacac tgattaagaa atgtcccaaa tagttaattt atagcagctg
      121 tatatatttt taagggtttt agatgctagg ataaatcacc actttcctaa ttttatatct
      181 gtatttaatg tatatgatac atttaaataa ttattaaaac ggctggtgct taaacaggag
      241 tccaattcca tgtctgatat tgctctgctt ttcaggctgc tgtaataaaa ccattctttt
      301 tatagcatgc cattattaga aaccaatttc agaattattt ataacctgga atggcttatt
      361 aagcagcaat gcgagaatca tgcaaattac gcgatcaaat gcaatataat aagcataatc
      421 attagtctct agcacggatt aattaacttt caatatttta tttacataaa aaccaaatca
      481 gtgaaataac ttctgcacag tcaggcttgc ctttcaatat tttatacgaa caaaaataat
      541 gtgctgtaat tccattgacc gtgtccccca caatggtcct gtcccctgcc acatcttaat
      601 aggggacaag ctgagagtat tttctagttt tctaatggaa tgagaaattg cattttcttc
      661 ctctcccagc actattaaag t
//
LOCUS       KCKM01000896             984 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14229apa ultra-conserved element locus
            uce-1858, sequence.
ACCESSION   KCKM01000896
VERSION     KCKM01000896.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 984)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 984)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..984
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14229apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>984
                     /note="ultra-conserved element locus uce-1858"
BASE COUNT          311 a          181 c          190 g          302 t
ORIGIN      
        1 tttaacaaaa gactcagcat aaataaaatt ttgcaactca tttgaagatg cagcaaaaga
       61 cataattgac tttttagtcc atttttagaa caaactctct caaggccttt ttattcctca
      121 caggaattct tcccactgca ctggaactga caagactcta tgcgttactt tattttgata
      181 ctgacattta aacaataaaa taaagccatt taaaacaaat agtggtgctt taagtgtcgg
      241 agctgtcaag atatcaaatt atataacttg gaaaaatcag aattcattgt taatggtatg
      301 cacttaacac aaagggtcgc tggagtacta accagatata tattcagcta ccatgttgga
      361 gctaacaggc tatattcctt tagatagaat tgactatatt cacttaaatg gacttgactc
      421 tagtacaatc actgtattca aatgtcaaaa aaaagagaaa gaggatgtca cgtagggtca
      481 caaattatgt tggattttga cagattgtag ccttgcttta caagagcagt aacatctcat
      541 ttgtcaccgt ttgatctgta agtgcgggaa tgagagcgga aggccctcca tctccaccgc
      601 aatttaatcg ctctgaggcc gacagtggca gctaaagcca cctgcccatg cactgtactg
      661 ctgatctgtt ttaatttaat cgtccgtcag ctgggatgaa agcataaatc gtctcccttt
      721 gatctgcaaa cggtgtggtt tttttgtaag gcatggtgca gaatcagaga gacagttttc
      781 acatttagtg caacatagac aacatgggct tgaaaagctt gtaagtgata tttcactctg
      841 gtagtaaagc aagaagttgc tctttttgta aattgataca aagtaacatg agttttttaa
      901 ggtcacaggg caggttattt attcataatg tgttaattcc tgaagtttga aaaaacagcc
      961 tctcccttgg gcatccttgg gcat
//
LOCUS       KCKM01000897             420 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14243apa ultra-conserved element locus
            uce-1093, sequence.
ACCESSION   KCKM01000897
VERSION     KCKM01000897.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 420)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 420)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14243apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>420
                     /note="ultra-conserved element locus uce-1093"
BASE COUNT          140 a           94 c           67 g          119 t
ORIGIN      
        1 tgctttacaa atcctgcttc ttaccaaagc aattacttct cttcagttgc tttcctcccc
       61 cttagttaaa aatttatata tgcaaatata catctacatg aagataattg tacacataca
      121 catgatcaga ctttacactc tgcggaagac aaaataactt tggaggcata aatcttaatg
      181 tcaatgacag gaaggctttg gtgaaccatt accataaatc tgacaaacgc taatttgatg
      241 ggtggctgta tctgtctgct gcaagaccag tctagacagt ctattgagaa atcctgaaac
      301 acaactgttt gttccctgta acaccatctg gatatggcaa taagagccga cccagtgcca
      361 ttcacacatg gatcaaagca catgctaatg ccatcatgaa gtcatacaca taaaaaattc
//
LOCUS       KCKM01000898             548 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14257apa ultra-conserved element locus
            uce-1808, sequence.
ACCESSION   KCKM01000898
VERSION     KCKM01000898.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 548)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 548)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..548
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14257apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>548
                     /note="ultra-conserved element locus uce-1808"
BASE COUNT          184 a          109 c          108 g          147 t
ORIGIN      
        1 gtactgccac tcataaatac cacatacgga aacatggagc atcagaatag agatggcaca
       61 gccatgcaag gaaaaaaaaa atctattatt aaactgatat ttaaaaggtg atatattaaa
      121 acgtactctt tttttaaact cactcacttg tgaccaatct catgagcaat ggtaaaagct
      181 gaacctaggc caatgtcttc attaatgctg cagctccttt caggctcaca cattccagcc
      241 acagaggcca agcctgaata aacagaagga gacacaaagg gtcatgccaa ggtgtttcag
      301 tcttaaaagc cctagttata aatgcctgga ttctttttaa taacctctat gcacagaagg
      361 agcagttggc aaaaggttaa ctttctagtc atttgcaaaa tcactagggg gaatttcaca
      421 ttgccggcta gacattaaca ttttttgaac tccagtcaat gctggaaaat gtctagacta
      481 ggggttaggt ttataaattt tacttctggt aacttgggac cacctagtaa cttgagccag
      541 gagaggga
//
LOCUS       KCKM01000899            1077 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14271apa ultra-conserved element locus
            uce-7399, sequence.
ACCESSION   KCKM01000899
VERSION     KCKM01000899.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1077)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1077)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1077
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14271apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1077
                     /note="ultra-conserved element locus uce-7399"
BASE COUNT          277 a          222 c          248 g          330 t
ORIGIN      
        1 aatctcacca ctagaattca ccataaaaat tcccaaagtg taacagaatt cttacaaaat
       61 ttcctagacc agttctttta gggaatcaag atctcctatg aaaaatatgg caaatgggag
      121 tcagggtagg ttgaggaggg aagagggaac gaggagggta aataagtgca gcaaaaacag
      181 gttctgagga atacacatag ttttgtctgc tttagatcac aatagaattt ttaataaata
      241 aatttctttt tctttgtaaa gacacttttt tgaaacagta gatttagccc agtcatttgt
      301 gtcatttgtt ttataaacca tcttttgttg tccccaaccc caccccgcaa tgtcataaat
      361 gttttagatc tgagtctctt gtacattgtc tttcgagttc attcggatca ataacggttc
      421 atgcactgaa ctgtgtattg aatttattgt gttaactgtt gttgtgtggt tgaaaggaga
      481 cttgtaagag ttatagtgat ttaggtgctc atgctctatt gctggcatgg gcaagtgact
      541 ctctaagggg gtgtcacctg taagctcatc atccacatta atgatctcta cagtccgcgt
      601 tggagcgtga tggttctgcc ggtgatgctg tttcctcatt ttgtagaaaa ttaccagcat
      661 cacggcagcc atgagagtga tcgccacaaa acaaccaatt atgattttgg tggtcttcat
      721 aacctcatct attcccggga tcccattgtt tgcgtccgtc acaggaatgg tgaacgtttt
      781 ttccgttgac cttgtgctct gtggagtgag tgaggttgtc atgttggtgg tctcccagct
      841 ggtaaccggg gtgggtccaa cctgctctgt ggtctgtgcc tcatcctgag aaggttccac
      901 agtctctacc gtgacggtcg aaaagtacgt gtaaccaggg ttatccaggg cagtcacgtt
      961 cagcgtggcg gaagccgtgg tattcccaac agagttactc accatgcacg tatacaaacc
     1021 cgtgtcttgc acagttacct ttgtaaaatt cagcgtgccg tcgctcagca cggcaat
//
LOCUS       KCKM01000900             818 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14286apa ultra-conserved element locus
            uce-3479, sequence.
ACCESSION   KCKM01000900
VERSION     KCKM01000900.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 818)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 818)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..818
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14286apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>818
                     /note="ultra-conserved element locus uce-3479"
BASE COUNT          244 a          151 c          175 g          248 t
ORIGIN      
        1 actatttgtg aattaggagc tgttagttca aaaagatttc ataagccttg aaaaactacc
       61 ttatagtagc tctttgaaac tgaagctgct ctttggacct acagctgtcg ttttttagag
      121 gctctatgag cagcaatgct gtttgctgtt ttttcttggg gttttgtttg tttttttaaa
      181 tcacatttta gtcaccttca gggattccat gaactaccca cctcacacaa gcgtggacac
      241 actaaagaaa ctgttttcgt ccatggctaa atgatgtctt tccatttcct catcacagaa
      301 tatgtcaggg attcactaag gattcccatt caaatcgagc aggagagcac agtgctgact
      361 gaatacaaat tcgtgctgga gaagtggaac aaggttagcg aagtgtgcag ttggcgagat
      421 tgatgttgat acccttcact gccaagtgaa atgccaataa tgcttgtata gcattttgtg
      481 agggcaatgg gagtattgat tcttgagcaa taataaagaa tgaagctgct ctctcaggta
      541 taaaaatatt ggcaactgtt acaaagaatt gactcataga ggcctgagtg ttggcccatc
      601 ttaatacaaa taattcaggc ttcagaagga tttcaagagc agccaggcat ggacctcagg
      661 aacattctct gctatgaatt tatctgcagc tttcacaagc cttgtctgtc tatcaagcaa
      721 ttggtttttg aggtgcaggc acaaaaatgg atttctcaag gcttgttggg agacaataca
      781 aaaagccagt tgagctatga aattttaaca cataaaaa
//
LOCUS       KCKM01000901             578 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14301apa ultra-conserved element locus
            uce-7649, sequence.
ACCESSION   KCKM01000901
VERSION     KCKM01000901.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 578)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 578)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14301apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>578
                     /note="ultra-conserved element locus uce-7649"
BASE COUNT          138 a          155 c          129 g          156 t
ORIGIN      
        1 agacccccta aatacaattt ttctggagca gctgcaccct ccaagtcagc gcatccgtct
       61 gtggcccgtg aagcgccggg agctgctcaa gccgtgccct gctgggctgc tcctctctcc
      121 catctttcct ctcttacctc ggaagttttt cctcctctcc atcgcagcgg tgccgggggt
      181 caggcacaca aaggtgccgt cccctgattg cagcaaacac cgccatgtgt tgtgtgtttg
      241 atgaattaaa aggatgctgc caacttaatt acactgtaac ccttcaataa aggaagggca
      301 gagctgatta actagtgaat aattgggggc tgattgatgg ctttctccct cactgctaaa
      361 ggctgtatat ataattattt tgcctgtggg cctaattttg ccactgttag cttccacttt
      421 tgtcatcagc tgtaatttat ggatggggcc tgaagcctta aaaaaggctg gaaaatgaaa
      481 tagccccaaa tccccagata tgtcacctgg aaatggccag cagcagcctt taacgtcaac
      541 atttgcagcc atttagcagc attaacacct cgtgctca
//
LOCUS       KCKM01000902             860 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14317apa ultra-conserved element locus
            uce-6569, sequence.
ACCESSION   KCKM01000902
VERSION     KCKM01000902.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 860)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 860)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..860
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14317apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>860
                     /note="ultra-conserved element locus uce-6569"
BASE COUNT          285 a          166 c          144 g          265 t
ORIGIN      
        1 ttatcaaagt gaaaagtaaa cttaagactt ggcatgtaca ctagaattca tacaaatata
       61 ggtcatggca aactgagaaa gcaaggaatt atgcaaacct actctgatca tatttgtgac
      121 ctttgcaaaa tataccatta ttatgacagg aggcaagaca gatgcagctt acatcactat
      181 cattattaag tgtgtgtctt tgtatgatgc acagcacaag ttactgcagg aaccagtaag
      241 aatacacaca ggggcgtggg tctttgcatg gagctttagc agtgatgact tgaattcagc
      301 tttccttgat atagataaaa actgatattc catgcacaca cattttattt acagttgatt
      361 catcaacagc gactagttac ccctttctct ggcagcagta attatgagca gtccttaatc
      421 ttcttcaaca agctctactt cacaggtaaa gtctcagtaa cctcctcaag gcgtgagatg
      481 tttatcaggg cccattcagc agcagcagtc tctttcctgt acagtccttg gtatggctaa
      541 attccattgt ccctttttca gcagtcaaaa atccatgata aattctgtac aacactgtag
      601 ttaatataac agcagcacca gatattatat taattccttt gctaaaagct gtttgcaatt
      661 atctctctat tgacaatatt ttaccaaaac taaatcaatg tacatctcta aatatcagaa
      721 atgtatactt tgataaatac attattgtac aagaattctg acatgcaggt catgctattg
      781 ggctaggcta tatacagaag aacatgttac atggtcaaca gtaagttata tttattttcc
      841 taacaaaaaa tagaacatgg
//
LOCUS       KCKM01000903             289 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14332apa ultra-conserved element locus
            uce-2313, sequence.
ACCESSION   KCKM01000903
VERSION     KCKM01000903.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 289)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 289)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14332apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>289
                     /note="ultra-conserved element locus uce-2313"
BASE COUNT          110 a           64 c           32 g           83 t
ORIGIN      
        1 gcagctataa atcttacagt aatgcatacc aattaaacca caatgccttt atgaaacttt
       61 tttcctgttc tcttatttat tgacagattt ttttaattac aacacaatga aacgatggta
      121 ggtacataag atgcaatagt ataaaaagcc attttaaccc ttcccttggt taagacactt
      181 acagcagaca agaactgccc caccccgatt cccccgttct caaatgaaaa caaaaaataa
      241 atagaaatta ataaatataa aacaaatcac tgcacagccc ttaactctt
//
LOCUS       KCKM01000904            1088 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14346apa ultra-conserved element locus
            uce-342, sequence.
ACCESSION   KCKM01000904
VERSION     KCKM01000904.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1088)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1088)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1088
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14346apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1088
                     /note="ultra-conserved element locus uce-342"
BASE COUNT          394 a          215 c          165 g          314 t
ORIGIN      
        1 gattaaacaa acattaaatt atgatttggt ttatgtgatt ctagagagat gagaggtttt
       61 aaaattcttt ccccctttct ctctttcaaa agttttgaag gtgaaacaga aaaatgaaac
      121 tgaaatttct tggaacgcac ttgagcatat ttaactacgt ttcctgcact aacaaataag
      181 gattaaaccc cacagaatat acagaaagag gcatgcctgc acacacacac gtatgcgcac
      241 ttacacacgc gcacgcacac gagcaatacc tacaaaagac ttcctcctgt ggctacacca
      301 ttgctttgca aacaacaagc taatttgggt tcctatcatg catctgatcg gtcatacagc
      361 aatacaaaac agaaataagt aaagacgacc atctgcttgt tagctgaaac tataaaagta
      421 catcttttta ataaacaata aaattagttt gacagggcag agaccacctg aatagaaaat
      481 caaatatttc atgttattta aggtgtatgt ctgctggcta ttaaaatact cctctttaat
      541 ttattacagc aacacacaca atactcatgt catcctcatt ttctaaatca ataatcagca
      601 cagcatgctt cattaacagt gaccaatcac gaatgagctg gggatctcat tttacaacat
      661 gagcattcct aagacataaa ccatctgcta cttgtagtaa cagaaaaatc aaattaatcc
      721 attcttatca tgcattcaga ttttaaagca attaaagatg ctcttagtgt aatcgcagcc
      781 acagaagtag ttctgtaatg aggaaagcaa actcttcact gaactttctg tcattctcaa
      841 tacatttgaa aactttacaa gctttctgca ctccagtggg ccattgttct ctgaacacag
      901 atgttgaaaa caacaagcaa tttttattaa acatttaatc tttgcacatt tgaaggagtt
      961 taaatactga acagtgatca aaaaagggca ttaaaacaaa aaataactgt acaagtaaaa
     1021 caatgcatgg ggtctaacct aaatcagtaa attcggagga aagattcttt ttatagcctt
     1081 aactcatg
//
LOCUS       KCKM01000905             540 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14361apa ultra-conserved element locus
            uce-7107, sequence.
ACCESSION   KCKM01000905
VERSION     KCKM01000905.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 540)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 540)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14361apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>540
                     /note="ultra-conserved element locus uce-7107"
BASE COUNT          158 a          114 c           93 g          175 t
ORIGIN      
        1 cacagagtga gcggcataat ttaaaaatca aagaaattca tttcagtagt aaaaggttaa
       61 cagcctttag gaggaacact ttttaatcac ccacgtctag actctatcac tcgaatcacc
      121 ggcagcagga gtgaaatatg gctaagccct cgtcaccaaa cagcacctaa agactgttgt
      181 atttaatcat gtctgtgcac tagttatgga ttttcattat gattcccgat gctgttgcgc
      241 tgtgtaaaat attaatatcc atagtaatga tgcatgaagc ttggagtgta atttcttcac
      301 tctccttgtc tgatattaaa ttgttaccac tttatcattt gtgtagaact gcacgtttca
      361 attaatcttt ccgtatcagc agccctgatt aatatagatc atgattcata agcttatcgt
      421 cactatagtt ttaacagatc atttataaag atcttaaatt tcagggcctg ggaggcgcag
      481 ccactccatc caaggctttt ctcacttctt gctccagcag gtttctgcat tcaaactact
//
LOCUS       KCKM01000906            1118 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14377apa ultra-conserved element locus
            uce-5834, sequence.
ACCESSION   KCKM01000906
VERSION     KCKM01000906.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1118)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1118)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1118
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14377apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1118
                     /note="ultra-conserved element locus uce-5834"
BASE COUNT          325 a          214 c          223 g          356 t
ORIGIN      
        1 gagtctgtct tgcaaataac gtttccattt ttgctaattg gaaagaatca agcttttgtt
       61 cagctgtaga gatatggttt gatattttta aaggaaagga attctagaag ggctgttttg
      121 tcagcagggt gaattaacaa agaaagagaa aaaaatagga agaaaagaaa gaaatttgaa
      181 tgctcactca cacatatttt ccagttcaga tgcctaaaat acctgtgatc ttccagccat
      241 gttttcctct tgcgaatcct agcggttttt attaggacaa gtttcgtttt attgccttgt
      301 tttcctgtaa agccaacaag ttaaaacaac aggatttcat tttggattgg caggccagct
      361 aggagataag gcatcgtgcc ttttatcttt ttcttttcct tcctcctcct gcctcccaga
      421 atccttgagg tgctccactc cgccactgtg ctgctcaact ttctggccta aaaatctttg
      481 caggtgattt atagaaccct atggttattg tatggctaat gattcatgga acttcattaa
      541 ataccaagta tgtgcctgct tactgtctgc gcacactgca tattagaacc tttgcactcc
      601 cccttgcaaa ttgcccccat taaagtcgca gacaaaaggt cctctcagta gcttacatat
      661 tttcccacat gtgagagagc aattggaaac ttcctcttga taactaaaaa cttttgaatt
      721 agaatttatg agaagggtct tttggtctca ttgcctaagg gctgaaacag atcccagtgt
      781 gtacaagcgt tcctttgatg cgtggagctg cacagggtaa cattttttaa caggatcaaa
      841 aagcgtaatg cagggacaat gtgcggaggc ccttactctg acacaaggag ttggggtctg
      901 tgtttttcca aggctaaaaa tgtaaacgta tgtgtccagg gtagcaacaa cattttatat
      961 tctttttaat tgcagtaaag tcctagataa aataatggca gtcagtgtta caacttcctt
     1021 ttctttaatg ttcccctaaa aatgctttga agctgctttt acctttggga aagtattgta
     1081 catgtgttag gggaaaatat atcaaaaaga aaataaag
//
LOCUS       KCKM01000907             570 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14392apa ultra-conserved element locus
            uce-7513, sequence.
ACCESSION   KCKM01000907
VERSION     KCKM01000907.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 570)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 570)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14392apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>570
                     /note="ultra-conserved element locus uce-7513"
BASE COUNT          160 a          134 c          113 g          163 t
ORIGIN      
        1 ttttctgtcc agagaaccga aatcccaaac gaatgtgtca aagcccattc tgaaagcctt
       61 ttcataagta gcacgttcct gttcctgtgg tttcccaacg tacacataca gcccccagat
      121 atttcctgct ccttattctc caaagctcaa agtgtacgtg ggtcatctcg agacagctct
      181 gagccaagga tgagtcagat cggtgagagc agagtagcga ccgcaagctc ttcacttgtt
      241 cactggacat caggcagatg tggggataaa actgtcaagt gggaaaacac aaagagaaat
      301 attgctattt tctattattc acattcttcc catgagctgt ttgctcagtt gccatggcat
      361 aggcggtgag attttataat ttttcccctg cctgccatgt gctcacacaa caatgtgaat
      421 ttaatcagtc cagacagttg gttgtgtttt gtccatgtga gtggaataaa acttttctca
      481 ccagctaaac ccacaaagta tctaaaagcc ataaataatc agtaactcct atgacttgca
      541 cctgcttgct ttatttgacc aaggatacag
//
LOCUS       KCKM01000908             726 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14408apa ultra-conserved element locus
            uce-2553, sequence.
ACCESSION   KCKM01000908
VERSION     KCKM01000908.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 726)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 726)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..726
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14408apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>726
                     /note="ultra-conserved element locus uce-2553"
BASE COUNT          242 a          114 c          175 g          195 t
ORIGIN      
        1 tctgctccta tctgcttctc gcgcatatgc atggagataa atgcgcacgc atataccgta
       61 tatgtgctca gtctctaggt aatcagagac acagataaaa taaagcttct agagtgacag
      121 acattctgca gacagggttg ttagtttatg taggctatag gcagagtcga ctggaaaatt
      181 ttgatcactt taatttacta tatccagcat gcctgctgta ctcgtccagc acttttatca
      241 agccctgtga ggtggtattg atttttttat tttctatgta ggataagaag acagagagtt
      301 aggagcaaga gtgaatgaag aactttcctc agattactgc tattctctag cttattgcat
      361 cctgtcgttt gtagtttcag atgatgtcca gtatgtcagg gttgcttgaa gcaataaaca
      421 gggtgaataa caatggaaag gctagatgag aaagattgaa aaaggagaaa gaggcagcaa
      481 agaaagtaag aaagtgaatg tgagaaatag gaaaaaggga gaaaaagcag aggttgagaa
      541 aaagtgtcct gggtgtagag agcttgataa atgcattcct ttaaagaaac tgtaaccagc
      601 catgacagtt tttcaaccaa cagcttcaca tcaaccctat ggaattgtga aggaggagaa
      661 gcggaggctt ctgggtgtta ctatttcgca gtgagaaaaa aaaaaaaccc agaaatgttt
      721 aaggta
//
LOCUS       KCKM01000909             541 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14423apa ultra-conserved element locus
            uce-4339, sequence.
ACCESSION   KCKM01000909
VERSION     KCKM01000909.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 541)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 541)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..541
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14423apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>541
                     /note="ultra-conserved element locus uce-4339"
BASE COUNT          160 a          102 c           85 g          194 t
ORIGIN      
        1 aaattattcc attttctagc acagctatgt ctcaccttta taggcgtaca ccaaagagga
       61 atagaaaata aatagcacat aattttgcat ttttttaata agtttgaggc taaacactag
      121 gaaaccttgt cagctcctgc taagttgatt ccaattaaag tttctggcag ggttccagtt
      181 gttttactac ctcaaatagc actgaacata acaaggttta tgaagcattc aaaagtcaaa
      241 taccctatta acataaacat gtagtgaaat caactcttct acaattttca acttgctttc
      301 tttctttcat ttatgttgga ctaatctaag atgatgtctg ttttctttgt tgtgtcttcc
      361 tgcttgctga aatgcaaaac aagatttagt atcagagcag tgcatgattt gccctgagaa
      421 cttagtccct ttggcaattt tattatacta ctttctatcc cactctgttt cgatagcagc
      481 attctgaagg ttagtttgct acattgcttt taactccaga atatcaagtg gtatatgttc
      541 g
//
LOCUS       KCKM01000910            1064 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14438apa ultra-conserved element locus
            uce-1598, sequence.
ACCESSION   KCKM01000910
VERSION     KCKM01000910.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1064)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1064)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1064
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14438apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1064
                     /note="ultra-conserved element locus uce-1598"
BASE COUNT          310 a          197 c          243 g          314 t
ORIGIN      
        1 tttgcccgcg ctcggggatt cctggcatta aaaataataa aagaaggaag agcggcaagg
       61 tcatgattca ccgggtacat accacttata gagtgatttt caaagggcat ttctctaatt
      121 tacagggctg gataagttta agatggcaga agctgggaag aaaagaaacc gcagcgcaaa
      181 ccagtaggat ggtaataaac agcaaagctg tggccccaac ctagtatttt ttgagctgat
      241 gggtgataca aaaatacagt ttctaagcga gtaacaaaaa agatgggggg aggagggatg
      301 aagagggggg aaaacgagga gggagggaga gaaagttcct gtgcactttg ttcaaggttc
      361 tgcacctctc taagcagctg tcacatccgt acattatggt acattgaatc tgaatgaggc
      421 tctccacatc aaaaccttgc atccattatg atatcatctc ctgctctaag ctgtaatgct
      481 tattaattct gcacccatac tctccaagct tcagcaaatg tattccatca gcctagcatt
      541 taatttaatt agtacagctg ggctctcatt ctcctttctg tgtcagaggt attgtcagca
      601 cgttctgcta taacacaatt actgattgct tttagatagg cagaaatatg attagggtat
      661 tgggtgactg tatcataagc cttattagat tcatttgaaa tctggagata aataggaaac
      721 ttttatttgc agtgtaatga gattatgctt attaggccaa ggcctcacaa ccttttgcaa
      781 agaacatagt gtatcactag gattatactc tggaaccaca cttttttgct cgtagcatcc
      841 aagcaatttc tcagcagctt tgagatttaa ctgttgtagc cctgtacaaa ttttagaatt
      901 gttttctggc ttagtggctt tctcctgtga tggattgcgt gcgccttcct ccgagcattt
      961 tttgcttaaa accagaaatc tggggaggag gttttgttca acagagaaaa gatgtttggt
     1021 tgaactgtgg ccatgtgtgg atgagtaaac atgctgatac attc
//
LOCUS       KCKM01000911             826 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14469apa ultra-conserved element locus
            uce-7032, sequence.
ACCESSION   KCKM01000911
VERSION     KCKM01000911.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 826)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 826)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..826
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14469apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>826
                     /note="ultra-conserved element locus uce-7032"
BASE COUNT          197 a          193 c          192 g          244 t
ORIGIN      
        1 aggcacctgg ctgattgcca tcctaaccca tccagccacg gggagaacgc atccgctcct
       61 ccaaatgggg gtcccgcttc cgcaaagggc gatcttggct cagtcccttc acagtggggt
      121 cgggcagtgg ctcgcagagc tgagcagacc cagctcacag cacccccaat tacacaggga
      181 tgctgttctt ggcaggtgtt tccagtgagc agctgctttt tcactacctc agcacctctg
      241 gaaggtgttt gtgaaaagat gacgatgccc ctttatttct catgtgccta ccagcttaat
      301 attgtaccca acctctcatt tgggcatcgc ccattctgca gtgcatgtct agtgtttatt
      361 tcagtgtctg tcagagaccc agggttaaaa ctattggagg tccagatgac atctggcttc
      421 tcagctcctc cagaatattg gctgcagtgt ttatcagtgc attattcatc aaaaccgatg
      481 atgcaaagta caacatgctg tctgcagctc agtgtaagag tggaaagaag ttggcagaaa
      541 tgcctcgtgt tctgtgagca gcatgtaatc aatagtctgg gtgcttgttc actttatgtt
      601 gatgactatt ccctctggta cgtctttgta tatttttggg ttctctgtat taccagctgt
      661 gcgatttttc tcttttttct tgataccagc cttgatagaa cagaaggggc aaccttttgt
      721 gcagtagatg tcaaatcaaa taaactattt acacaaagcc tggaaatgag agttggagaa
      781 gaaagattta gttgagaatt tccatgacag cctgatattt ctttct
//
LOCUS       KCKM01000912             492 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14484apa ultra-conserved element locus
            uce-913, sequence.
ACCESSION   KCKM01000912
VERSION     KCKM01000912.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 492)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 492)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14484apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>492
                     /note="ultra-conserved element locus uce-913"
BASE COUNT          133 a          101 c           98 g          160 t
ORIGIN      
        1 ttagctggat ttgaagctag agggtgagag aactcccgtt gcattttacc ttcacaatgg
       61 tgctggaatg gttgaataaa gtgtggcccc gctgcccata tgccattcag cttctgtctg
      121 tctttttgtt tacactggga atacaatagg aactatagtc cttccaatgc atcatttata
      181 agtgtattct acctctgaat gtacagacag aactggctct gtgaatgagc tctgtgaata
      241 ttgccaagac actgtgcttt gttcagcatt attcttcaca atagatacca cactttggaa
      301 gtaattttaa aaagggaatc aaaatagtgg tacttttagc ctttgtttct tttataccac
      361 actgcattct ctgtctctca ctcagctgct tctattatac tgacaaatta aataaaccac
      421 tccattgcta aagaggcttg ggcgggctgg gcttcggtac actgctgcac taggaagttg
      481 aaataaacat tt
//
LOCUS       KCKM01000913             550 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14500apa ultra-conserved element locus
            uce-7833, sequence.
ACCESSION   KCKM01000913
VERSION     KCKM01000913.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 550)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 550)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14500apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>550
                     /note="ultra-conserved element locus uce-7833"
BASE COUNT          166 a           96 c          121 g          167 t
ORIGIN      
        1 aagcattgca gcataggcgt tgctaattat ttatttcctg ctgttaagca gaaaacaggc
       61 ttgactgccc tcacaacagc tgcagcatta caatgtgtga aacgctatga actttatgtg
      121 ctagctctcc tgaagagctc tgggtattac aagcaggtag actagttgtc agaagagcct
      181 tctgaagagt cctagtgcat cagcagcaat taatgcaggt ggtattttag acaagggagc
      241 taatgagctt taatatgcat gcaggtgagg gagtgctgaa tcagtagagc cattaatgaa
      301 cctatgacag cctaattagc tacaatttaa aatctatgga atctaatcag aagagctgaa
      361 cactgctgca aatctgtgta tgaatgagtc tttctaaata ctccaatctg ttgcttagtc
      421 actgattgat agtaattgct ttttttcctc tattgtgtat aggaaaatgc ccaattttgt
      481 tctgatagag gaggacacaa cattgaagtt aaatgcctga gatgtttgac tgcttaagtt
      541 ttaatcagga
//
LOCUS       KCKM01000914             508 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14516apa ultra-conserved element locus
            uce-7661, sequence.
ACCESSION   KCKM01000914
VERSION     KCKM01000914.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 508)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 508)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14516apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>508
                     /note="ultra-conserved element locus uce-7661"
BASE COUNT          151 a          106 c           99 g          152 t
ORIGIN      
        1 catgtttagc tctggagctc ctccctagaa ggtgaaaacc accgactata aagtgcttct
       61 tcagcttacg ggttcagata gttctgcaac gaccatatcg ggctttctgg acacaaaatc
      121 tccgctgatg ttaggataag aaaggacaaa cacagtgttc ccagagttag ttcagaggtg
      181 tacccatgac gaaaatataa acaaaagctg aggtaggtag cccacttggc acagctgatt
      241 gactttaata ggtgttgatt acactgctca tattgcatga aattaaaaag cttacaaatg
      301 ttctgagcca ttacccttcc atttaagaga gcttatgaca agttagcaac atttaatgaa
      361 atccttttca aaatgccata ggcagcctcc aaaagatttt gctttgaaat gcaacttgtg
      421 gagttatttc aaaaagtttg tttactctag atcttcctct cttgctcttc cttaggatac
      481 tccaattttg cagctggtgg gatacttc
//
LOCUS       KCKM01000915             627 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14530apa ultra-conserved element locus
            uce-3610, sequence.
ACCESSION   KCKM01000915
VERSION     KCKM01000915.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 627)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 627)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14530apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>627
                     /note="ultra-conserved element locus uce-3610"
BASE COUNT          171 a          142 c          140 g          174 t
ORIGIN      
        1 ttttttttgt tgttcaagtt tcttgtttgt attcagtcac catgctacgt tttaaatgtt
       61 attgatgaga gctgatgtaa gaaaaaaaaa aaaatataaa ggcaagtcct ggccaaagta
      121 gcccaaagtg gaggggcttt atttttatta cttctccctg gcaggagtcg ctcccctccc
      181 ccagcagccg cactacaaag cttgttgtac agggactcca ttaatcctac atttcctcga
      241 tggtatctga ggcacagtgg gtttccacag aaattaattt gtcctgacaa caggcctaaa
      301 gattggagtc cagggatcac ttggcaaatt ccctttaaac tgagcacaat aataaacaga
      361 aagctgataa cgacagttct gaaagaccac acagaggaag gagcccgagc ggagtcgctc
      421 ggatccgcgg atgcctccgg tgcccggcgc tttctgcgcg aggaggagtg gagcgcactg
      481 atttatgctc ctcttaacgt cgcctcgccg ggaacttcag ccaggaacgt gctttttaaa
      541 ctcttttgga ataagaataa aagttcagcc ccaagccatt ttagaccttt taaatatttg
      601 tattaatagc tccagggttt ttcacgt
//
LOCUS       KCKM01000916             748 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14546apa ultra-conserved element locus
            uce-3859, sequence.
ACCESSION   KCKM01000916
VERSION     KCKM01000916.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 748)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 748)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..748
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14546apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>748
                     /note="ultra-conserved element locus uce-3859"
BASE COUNT          170 a          227 c          216 g          135 t
ORIGIN      
        1 agccgtcggg gcaaccccct actcgctgat ggacagagct accgaggaga tggagctact
       61 ccgggagggg aaatgctgag aacgaacatc gctgaccaca tttaaactcg tctcgctgcg
      121 cgatttttgc catctctgtc gccccacagg agctgctgcc gccgccctgg aaaccctgga
      181 gtccacgaac cggccaggaa cagagatgcc aaaaataagt aaagagcctt attttttttt
      241 tctcaggggg gtaacctcgc tccacaaaac ttaccatcta agagctccag agttacagtg
      301 ccatcaacgt attcccacca gtgcttcccg tccgtggaga ctgggatctc ccagttggac
      361 catttacaag ccaggtggat acagacgcag gccacaacgg gcggggtgta ctgcaggctg
      421 aaggtggtca ggtgcaggct gacgacacca gcggggagag agaaacagaa agccatcaac
      481 tcccaagcct gaactccggc gctcaccatc gcccgctgac cagacgctgc gcaggaggcg
      541 gggaaagccc ggcccttcct cccccagtac ggccctactg atactggggg gggggggttg
      601 cacctcggct tgccgccttc cccgtctcgc agcggataaa tttgggggtg ggccggcagg
      661 ctcagagaca cttccagctc tcgggacggc attcaaggag caaacgggcc ctcggcagct
      721 tttaggaaag gtctggcctt tcccccaa
//
LOCUS       KCKM01000917            1081 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14562apa ultra-conserved element locus
            uce-1776, sequence.
ACCESSION   KCKM01000917
VERSION     KCKM01000917.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1081)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1081)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1081
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14562apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1081
                     /note="ultra-conserved element locus uce-1776"
BASE COUNT          353 a          210 c          196 g          322 t
ORIGIN      
        1 cactgtcaga agtgactgac aatataagtg cactgacttt gaggtgcctc agcagagaca
       61 tccccaaaaa ctcggcttta agagtaagga tgtgtttaat catcagtcct catcaaaaat
      121 ctctgcccag gtttctgtta ggagtaatca gagtcagact ttgtgcaata aagtaatagc
      181 tgtgcaccag tttctgcctg agaaaagatc cctttagtct cctatgcagg cagggactcc
      241 accacttccc cgctgtagca acacacctta tttctatccg taattaaagc tgacatatct
      301 tgcgtgggcc attcaccttt tattcaacat gaacagcctg caaaaatagc tgagaagttc
      361 acaggaagga agcagttaaa tgataaaaat gtgaaatgtt atgcagcaag ctgtgtacaa
      421 ttaactagaa ttcaaatata caccttgttc caatccaagc catttatcag ataaaaatag
      481 tctgctagaa gaatgtcatg attaatgagg tgagactcca gctaattact gtttcctcca
      541 gaagtaatta ggttggcatt gctaatcaag atgaatgaac actctgaccc gcttttttaa
      601 atgtaaaact atgagctgca gcagcaataa catcatttag ttcaggcaat gtagtcttta
      661 ttaggcttgt agtttgatta aattcttttg ttacaccagg ctttccacac atgagcagat
      721 gaatgctgtg atgttcaaag agtttgtcac ccttaattaa agactgaaaa gacttgttca
      781 attcacaggg caatacacag gacagctcta aattgatagc ttttaagtgg gggataactg
      841 aggaagtcat aggttttgcc catctgcaag aggatccctc ctccttccac aattttccat
      901 catagtagct gaaaaattaa tatcagatat ttttgtattg attccattag gcagcactca
      961 tttcatcaga gcaccttttc acatacaact ataagtttta tttgtataga gcaaatctat
     1021 tataaattaa gagaaagcaa gctataagaa gtacattcaa aatataagct aatttattgt
     1081 a
//
LOCUS       KCKM01000918             584 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14577apa ultra-conserved element locus
            uce-1570, sequence.
ACCESSION   KCKM01000918
VERSION     KCKM01000918.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 584)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 584)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..584
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14577apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>584
                     /note="ultra-conserved element locus uce-1570"
BASE COUNT          196 a          101 c           93 g          194 t
ORIGIN      
        1 tttttaattg ctcatagtag ttacaatggg ttataaacct taaactttta cagaccttaa
       61 atgtcaccaa tattactgaa tacaaactta aaccagcttt cacagatgag aaatgccgtc
      121 agaacagcag cagtggaatt tatctcacta gatgaatttc tgttatatga ttgtaaaatg
      181 aatctatttt tttaaacggg ttaagggaag ggacagtcag tctgagattt acacctgatt
      241 tgtgttatag taatctttga aattaagaag tgtatccttg catttcatta aattctggct
      301 aatgagataa ctgtcttccc aaggagggag tgatgaagta ctcatgccat aaagcataaa
      361 ttaatgctgc aaggttaaac actggaacta actcatgttt caacaaaagc ccctaccagc
      421 agttaaatta actgacataa ataccataaa atctgtcttt attttagtct cagatgatgc
      481 ttctttttac acccctgctt tcagtttgta taactcattt ttgcacatta ttgcatgcat
      541 catttgccgt ttaaagaatc agctacaact gaaaaaagat ttaa
//
LOCUS       KCKM01000919             775 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14593apa ultra-conserved element locus
            uce-2147, sequence.
ACCESSION   KCKM01000919
VERSION     KCKM01000919.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 775)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 775)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..775
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14593apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>775
                     /note="ultra-conserved element locus uce-2147"
BASE COUNT          252 a          129 c          159 g          235 t
ORIGIN      
        1 ctctttttat gcacacaaac acccgtatgc acatgcacat atattaatat atataatata
       61 tgcagatatt gatggaattc tatgagttga aagagaggga agatgtcttt aaggatccat
      121 atctctcgca gcagatatat gttattatca ctgaaatgtg gccttcagtc ttgaaacagt
      181 taaaagagtt ctacggccac aaaagaagag atttcttcag aattatctcc cgcctcacat
      241 ttgctcttag gcaagcagtt taaaaaagcc cagtgattga gccagtgatc caatttgaaa
      301 tgcagaaatg attagagctg cttgcctcat ttcatatcga aattctctga tttatgacag
      361 ggctgcagcc aagatctatc tccaaaggga attagtgtgc aagtttgcat atttttgtta
      421 tttaggtttc tgatagcagc tgctagctag aaatactgaa ctgggaggtg gtggtgcagg
      481 gtttttcagc cattgaggca aagaaagata agagtcttat gtttaggaca tttagacccc
      541 ttgaccatct caccatacag taatttttaa acttggattg cagtaatacg ggaatccagt
      601 ggaatggtta attgtagttg tggagaaagg aattaccaaa attctgtctc catgttttaa
      661 ctaggagaat tttaatgagg cataaaactt caatcatgcg actgacctgt ggggcagagt
      721 gtagaacata taatgaaaca gaaatagaat tctgaaaaaa aattattacc ttatc
//
LOCUS       KCKM01000920             945 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14609apa ultra-conserved element locus
            uce-2843, sequence.
ACCESSION   KCKM01000920
VERSION     KCKM01000920.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 945)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 945)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..945
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14609apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>945
                     /note="ultra-conserved element locus uce-2843"
BASE COUNT          316 a          157 c          156 g          316 t
ORIGIN      
        1 ctcccctgga attaaataaa ccatattttt aataacttta aaataatgat acagtacaga
       61 atgcacacaa aaaaagccaa aacaaaaacc aaacaacaac aaaaccaaga catgcattta
      121 ctttttcaac cttgagctgc ttttttgtgc ttattttttt tttcttttga ggtgtagagg
      181 aagaaacata aatgagcctt gctgtatgcc ttccatgggc taaacgaatc aggctctaaa
      241 cttttatcta gatctatgga gcttggatat aaattgaaaa gatcacagct gtggggaaaa
      301 gacctatact gtaaaggcct ttctgcatag attatgaaca tcataactca ataatcaaaa
      361 ctatagttat aattggaccc aatgggggtc tctctctttg atcagatcac agtaactgtg
      421 actttacact ggaaaatgtc actactgtga aggtttatca cctgtagagc tggtcttttc
      481 tctgatgcca tgttcagttc tcattagcat tattcaaagt ttagttgtta attaggttga
      541 cacttcaatt acaatcatca tctacaagag cagtcaggac tgcttgcata aagaaacaaa
      601 aagataatca ttcttgcata tatttctgaa agaatgaaag ctgttttggt gctagtctgt
      661 gtttataatg ttctatttaa agagtaactc tcaatgtttt gttgtatact atttagcaat
      721 gtaaataatg ctttattggc tatattgtaa tacaaaagga tgtagaaact tgcattcagt
      781 gtaactggag ttgacttact tctccaggtg ttcttcatga tgaaaattgc gagagtttag
      841 tctataactg gatgtaattc tacgtatctt taaagaatac tgtaataatt cagtaacaca
      901 tgatttttct ccaaactatc tccaagtaag agtcatctga attaa
//
LOCUS       KCKM01000921             932 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14624apa ultra-conserved element locus
            uce-627, sequence.
ACCESSION   KCKM01000921
VERSION     KCKM01000921.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 932)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 932)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..932
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14624apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>932
                     /note="ultra-conserved element locus uce-627"
BASE COUNT          282 a          150 c          191 g          309 t
ORIGIN      
        1 ggttttgtta atccacttga caatttctat tttttctaat tttcttccag gttgtagcag
       61 attagatctg ctattttaat acatatgcag aagatcctgc gttcttgata caactctgtc
      121 agaaaataaa aatgacatca aattcattag gttgaatgtc tgcatggtaa ttatttgtct
      181 tctctgtgtt tagtgttggg tacacatgat aaaatttaag ggattttaaa ttatgggggt
      241 tgcattaata ataatggtag gcacttatgt tgatcagact tcccatatgt ttccaattac
      301 gtagttgtgt ctcaagagtg gaagagatat gataaatggg aatttataca tctgtaataa
      361 aaagatctag caaacaccta gtaatttaca tatctgcctt gaaatatggc acgctggctt
      421 tgtcagtgct ggtaagtcca tttcaaggat gtcgccctta gtccattagt ttggataatg
      481 agccctataa agtacattta taactcgtgg cactgcaagg agatggattc taattttcat
      541 ccttttatct agacacattg aaagaaggtc aatggagggt tctgtatgat tcattgtccc
      601 aacacatatc agatgacaga gacctgataa tgtcagtgca taagtgttct ccatatttgg
      661 aagcaggact tgaaagaaat tttctcagca tcatgctttg aagtgaagtg gagactgaaa
      721 ttaaaagccc tatctctttt tctgtttaaa atcttatcag gcgtatgacc cgatagcgat
      781 tcctgaacaa aggaggggaa gcagcactta gcaggaaaat aaaaagtgtg tggttgctgt
      841 ggctgccttt gagtgatgca acatgacatt taatcaacct ttccccttca ataatgtttg
      901 ggtggcaggg gaaattgttt cataaacaat aa
//
LOCUS       KCKM01000922             634 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14639apa ultra-conserved element locus
            uce-5968, sequence.
ACCESSION   KCKM01000922
VERSION     KCKM01000922.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 634)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 634)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14639apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>634
                     /note="ultra-conserved element locus uce-5968"
BASE COUNT          231 a          121 c           94 g          188 t
ORIGIN      
        1 aaatacatca caaagtgtct atatttaatt gagctgggaa agcttttaaa accacaggca
       61 ttcccaaagc tttaaaatat taactattca gattttttga gaaaaataat gaacgggtca
      121 aaatagggca tttggttaac cagctgtggt gttgcaaatc tcatgtacac tcaaaacact
      181 tcttacaaac aagaactgca gaactaaact aacctcggtc tgcggtcaca atcctttggt
      241 aaggatggac acgcatatcg tgccttcgaa ctttagtagc caccgcacct agttaaattg
      301 caattaccaa gacaaagtta gaaaacattc aaagaaaaca ttaacagcag gtttatcaaa
      361 atggatttaa atgatcatta actacaaaag ttcattttaa gaaaagcaac aagttaaggc
      421 acagtagttt caaatctcaa tcttaaaaag tagtttatct gtgcagatta atattgcatt
      481 cattttaaac atcctggcct taacctgtgt aatccattca tttacaatcc caaaattaca
      541 gtatttcatg aaatctatta gacccaagca catttaagct ttactagtca catattcact
      601 gaagtgcctt tcttgcagca ggactatttt aaat
//
LOCUS       KCKM01000923             614 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14655apa ultra-conserved element locus
            uce-4899, sequence.
ACCESSION   KCKM01000923
VERSION     KCKM01000923.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 614)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 614)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..614
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14655apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>614
                     /note="ultra-conserved element locus uce-4899"
BASE COUNT          190 a           99 c          118 g          207 t
ORIGIN      
        1 cgtaaagcaa gcgtttttgt gtgctgcaca ggcaccagca aacctgacaa aggattcctt
       61 ctgttaaaac aatcatatat tgaattttga actacctttt aaatacttaa attgtcaagc
      121 aagcattttg tacaggaagg gttttcagta tataattccc taatgtaggt caattaaagc
      181 tataacactt tcctgaattt gactctctag aacaagtgtt ttttcctagt tgtacatttt
      241 ccttctgtgc atttatttca aatgttaata aagttttcat ctacaaaagg tttagaattg
      301 acagaacaaa actctccctt cttaaatcat gacaactact actgtttctg tctgcaggta
      361 gtggaggaca tgctagagga cgaggaagaa gaggatgaca gagatgacaa ggtaattatc
      421 tttcctagca cttgggtatc tggggatggg agaatttaga catgacactg tttttacaga
      481 cagttaaaaa aggagttgaa gtgttttagt ccagaaaatt ggacagagct gtttatcatc
      541 ctaacaatgc tacagtgtgt tgcaggaaag gatagaggac tataaatcct gctttttttc
      601 tttttttttt tttt
//
LOCUS       KCKM01000924             846 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14670apa ultra-conserved element locus
            uce-4400, sequence.
ACCESSION   KCKM01000924
VERSION     KCKM01000924.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 846)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 846)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..846
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14670apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>846
                     /note="ultra-conserved element locus uce-4400"
BASE COUNT          270 a          132 c          158 g          286 t
ORIGIN      
        1 ccatctctca cttggagagg cgtgttttaa aataattttg atactcacag aaaaatagaa
       61 cccagaacta tttcaacact tatttctggt gcattctcta ctgaaaaaaa tcaaaaccca
      121 aagatgataa ttcaaattta tttctaaaat tagattgtac ttgttagata cgtttggaag
      181 ggtttgaaaa aaaaaaaggg atggaagcat acttgccact gttggtcatg taatagtaag
      241 cgctgctttt ggttattttt gttcattgtt agttatggtt cctaattctg tagatgcttc
      301 attctgccgt atgaggaggt taatctacaa ttaaacaata tttcctcttg gccctccatt
      361 attttctgaa acagatggtt catcatttcc tgggctgtta aacacagcga ggttaaggtt
      421 agactcttgg gaatcagcta gttttgaatc ttattaggct gtagtaggaa aactaataag
      481 aatactcctt aatatcattt tgtgactgta aacaattatt tattagcaaa caattgatcc
      541 cagaagggca aattgttcga gtcagtaatg agctgagaaa agacagagca tatctgtgta
      601 tttggaaaat aattgtaacg taattgcaat gcatttagac aggcatcttt ttggacctgt
      661 ttctatcttt aaatgaattt ctgaaaacat taacaaggct tatatgctct tctgacattt
      721 acaagttgct tgtgccaacc tgagggcact gagaatgatc tgtatgtttt aatggtacag
      781 tagtgtgagt catctcaagt tattctaaaa ataagttact taggacagaa gacaaacagt
      841 tgcttc
//
LOCUS       KCKM01000925             849 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14684apa ultra-conserved element locus
            uce-3067, sequence.
ACCESSION   KCKM01000925
VERSION     KCKM01000925.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 849)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 849)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..849
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14684apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>849
                     /note="ultra-conserved element locus uce-3067"
BASE COUNT          194 a          230 c          192 g          233 t
ORIGIN      
        1 ggcgcgggac cccccttccc ggctggtcca gcccggcagc agccgccgcg cttcacgtcg
       61 caccctccgg tagtcactca gagaagtaat tggccaaaga ttattctgtg taatcgaatg
      121 gcaggggctt tgtataccaa acagggactt gtctttgtca aaaagtcttt acaaagtatc
      181 cagctccggg tgtcagggag gacaagtttt ttaatcatgt taaaatgatt tatttaaacg
      241 tcaagccatg tcacctcact tcctttcatt tttcaaactg tttgtgtttt ttctggatga
      301 taaatttatc ttcagacagc ctcaatatga ctaattaact ttgaaatata agaaccagat
      361 gtgtgagctg gagagctttc tgaactcatg ccaggcgtgt ttttcccctt tcctctctcc
      421 ctctcctctc cctttcccgc tgcctgtgct gagatggctc tgcaggcgcc cgcagcacat
      481 ggaaaaaccc agttagagcc gaaccgaccc tcgtcccctc ctgccctgcc ctgccccagc
      541 ccaggttgtg ttttcccacc cgagctggct cctaccgtgg ccacgagacg gggcgagccg
      601 cccaggacct gccgtgacga tatttagtgt ggaaagcaag ctgccacgat tcgtttgcca
      661 catgaaagga aatcaaggct ggatgtgaca tgaagtgatt tcttctaaag aaaatcctcc
      721 tgtgtgaagt gggttttccc cttctcatga gacgattgct ctgagccgct cgaagaaggg
      781 aaacgtttat gtaccaatta attaagcaaa gcctctcagc ttaatttttc tctctgtaat
      841 gcgcggtct
//
LOCUS       KCKM01000926             551 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14697apa ultra-conserved element locus
            uce-866, sequence.
ACCESSION   KCKM01000926
VERSION     KCKM01000926.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 551)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 551)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14697apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>551
                     /note="ultra-conserved element locus uce-866"
BASE COUNT          135 a          136 c           95 g          185 t
ORIGIN      
        1 cgaaagcaga accacagttt gttcacagac tttgcttgct gtctgcaatt ttttttatcc
       61 cttcgcaaaa ctttgaaccc catccagctt tgacacactg cctcttcagt taataactat
      121 caagtttccc cttgtctcct gtctactttt ctttgaggca attgcgcact cagcaccccg
      181 agataataac ccacatctat aagataaaag caatggcatt aatgtaattg tctgcctttc
      241 tctctttagc ctaatctttt ttttccttca gttttgactg cctctgtgac acctgttttt
      301 gtctcctctg atcctacgac aggttttccg ctgacaaggt ttttgcctga cagagattct
      361 gccagacaag aacataataa aatatgaaga actgcttgtc agagtttctg ccaatgctca
      421 catgaaatag gggaaaaaag aaatcctgac ttttttttta agggggccct gttctggtcg
      481 cttttggcct gtcaggaaaa cagcctccct ggccaattcc tgcaagccaa gcaggtgttt
      541 tcttttattt t
//
LOCUS       KCKM01000927             745 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14712apa ultra-conserved element locus
            uce-2151, sequence.
ACCESSION   KCKM01000927
VERSION     KCKM01000927.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 745)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 745)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..745
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14712apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>745
                     /note="ultra-conserved element locus uce-2151"
BASE COUNT          215 a          140 c          149 g          241 t
ORIGIN      
        1 tgattaatgg aaatatgggt agctggacac agactatatg gttataaatg gtgctgttaa
       61 aataaaataa ttattgtatt aataaggaag ctgtttggcg ttggccctac tctacctgta
      121 aaaatatttc agcccttgat atgttttgtg tttcacgata catcatgtgt tttcccgacg
      181 agcggctccg tggtgtacgt tttaatacaa tcactgctta gcaatgcgag tccctcggat
      241 cctggtgcat gcactgcagc tgcagatgga ttttttttat tgacttaata ctagttctaa
      301 ctagatcctg aagattgact aagttggtgg agcacatacc actttcaagc aggaatggga
      361 aaaaactagc atatcttatt gtacctgaaa cactctatga tatgtactaa atattatgac
      421 tactgcgagc cctgcaataa ttgattcacc cacacagcca tttagtctgt gagctgttcg
      481 ttttacaaat tctacaatct tttagaaatt ctttcagtga agaagattgc tgcctggcct
      541 cagattcatt atggtgattg aatcctcttc aatagagaac tgtttaaaga gagcacatcc
      601 ctgtgtgtct cactcagagt gaaggcacat aggttaaaag cttgtctggg tggcataatt
      661 cactgctgct gtgccaaaca atcacatctt attgtgacct tcataagata caaaaaggca
      721 acagtatgga gctagtcttt ttttt
//
LOCUS       KCKM01000928             656 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14727apa ultra-conserved element locus
            uce-1842, sequence.
ACCESSION   KCKM01000928
VERSION     KCKM01000928.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 656)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 656)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..656
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14727apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>656
                     /note="ultra-conserved element locus uce-1842"
BASE COUNT          196 a          134 c          118 g          208 t
ORIGIN      
        1 gaaaatatcg gggtgaaggt atttttccaa ggagcaatat ttgtcgccga gttcgattcc
       61 ccccgacaat agagccggag gtgtgaaggc ggcacaattc ggatttcgaa aatcccctcc
      121 gcagccttcc tgtgcagaga gacacagtta cgagtctgtc ttcagaagga ctcctaccat
      181 tctaaaaata ctgtcccgca gctgtttaaa atttattttt ttagaccata gcaccactgt
      241 ttggttgttt ccaatttctg aaaccacaaa tagtaaaagt gtactcagtc tactgcaaac
      301 ataaatagca aatgcacgct tcagcacttt taaaaggata tggaaattgg caacaaaaat
      361 gcagttcatg ttgaaaattt acgagggccc tgccatattt cttcagaaat acaatcaggt
      421 aaaaattagg aagatctcta ccagctgggt ggcatttttg tgttttcttt acttatattt
      481 tttttaactg aaagactttc attatgcaac ttctggcact tgataaaata gagcatggta
      541 cctttgctaa aaccacagtt tctttggtta tgtttagcat tatacaaaca tctttcacct
      601 tagatatcct cttgcattag tgtgtttcat ttcaaatact ccaaggcaca ttactt
//
LOCUS       KCKM01000929            1255 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14743apa ultra-conserved element locus
            uce-200, sequence.
ACCESSION   KCKM01000929
VERSION     KCKM01000929.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1255)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1255)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1255
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14743apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1255
                     /note="ultra-conserved element locus uce-200"
BASE COUNT          343 a          283 c          247 g          382 t
ORIGIN      
        1 ggggggatct ggcaatgctg tcaggtgtat aagacttgga tcccaggtct ctcgctctct
       61 ccttgcctcc cactctcata cttggggaga agggaatgct gttcctggct taaaacactc
      121 tggtcacgag ttgggccaaa tctcctcctt taaattagtg ttattaaatc atgtacactg
      181 cttaacattg tacataaaga tgtggccccg tctcccctcg ttctggtgct actgggggaa
      241 tttgttaatt cagctttcca ggggctattg tgaggacagt cacaatgcat acacacgctt
      301 aagagaacac atattttcct gtattttaca cagagtcctt gcaccgtatt aaaatacaca
      361 agcaaattct agtgttaaga tatttccaca ttatgattta ttccattatc attttttcca
      421 tctcagaatg caattaatat ggttgtgtgt taaatgattc agtgaaagta aatcttttat
      481 attcaggtaa gcaattcagc cttgtaaggt tttatgggaa ttagattttt tgaagtctgt
      541 gttgagcatg cccataactc tgacagagcc ctgcaggctc ttgtcttcac cttcaaatca
      601 taagacagag aaatcaagct ccctctgtgc tctcaattat accaaaaaac acggagcaga
      661 agtcttcagt aattcaatcc ctgtggaagc ttcttcatac tgtttgcact gttggaactg
      721 ctgacagcag caatcccaca atccctcctg gtaggctgtc aaagttcctc gtgtagtgtg
      781 agcggcactg ctctgtccca ccgctcctcc tcccgagacc tttaagcaca tgcatgactt
      841 ttgatgcttg ctcgatacag tggccaagag gccaaaaaac atcacaagga gagttctcat
      901 actcttacaa ggtgctttgt actcaaacta ataggatctg tggctacatg tgggccaggg
      961 ctggtgtaat ttaatcacaa gtacagctgc ataaacactg tactaaggaa tgtctgcctg
     1021 caattggatt ctttctttga aagtgcactg tagaaaattc ctgagtgcca ttttccatat
     1081 ggttaatgag caaatgtatc atggccagct tttaaaagta atttgaattt atgagttgcg
     1141 gtgattctaa cacatgtgca caagaaacac tgcataccca aggctcttcc ttatcatgca
     1201 acaccacttt gcagttttct gccaaacgac accaaaaaga accactctgt atttt
//
LOCUS       KCKM01000930             811 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14759apa ultra-conserved element locus
            uce-5288, sequence.
ACCESSION   KCKM01000930
VERSION     KCKM01000930.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 811)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 811)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..811
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14759apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>811
                     /note="ultra-conserved element locus uce-5288"
BASE COUNT          250 a          142 c          145 g          274 t
ORIGIN      
        1 atgcaactag tctactaaat accttattac aaatgtgaca agaagatttt tttctacact
       61 actcttactt gtttctaagg caaatggatc tcacggcttt tgagttaaaa tgcaagagct
      121 ctaagtaaat agcttcttat cccatcatca gtccaggaag aacagtatct ttccttgtgg
      181 cggtgagcag tttgaagaaa aaaatcctaa accacaaaat gatatagaat gtgtcgtttt
      241 cctgaatgct cttttacagt gtgagcaaga ggctttcatt tagtgaatac atttactcac
      301 tcagttttgg agagtcgccc ttcatttatt ctttcccttt ggaagtactt tcgagtgcaa
      361 attactgcta tcagaagcct tgaactgaga ggctattatt ctccatgctc agattaaatt
      421 aattttgaac agtttaatgc agcatgtccg agctgcaagt ccaagtggtg tcaaatctat
      481 ttctctgctt ttttaagctg caccttcaag ggcagtataa ttcatggtga atgtgttctt
      541 ctaatgtctt ttgctaagcg ttattatttt ctttcatttg caagtcatga ggctaaaatg
      601 ttaaccattt tcctcctaaa attatagaaa gaatgcttga ttttctgaaa gaggattcct
      661 atatttgctt gctatacatg aaatacagga aacacagtga tgatggaaga aagttttaca
      721 aaaaaatgga gaaaaaggag acactgcagg tctctgcaac attattgcca tgttagaaag
      781 gaattttctt gatcaagttt tccataataa a
//
LOCUS       KCKM01000931            1049 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14775apa ultra-conserved element locus
            uce-4666, sequence.
ACCESSION   KCKM01000931
VERSION     KCKM01000931.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1049)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1049)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1049
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14775apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1049
                     /note="ultra-conserved element locus uce-4666"
BASE COUNT          333 a          155 c          204 g          357 t
ORIGIN      
        1 cggtagctgc tgcagtaata agtctgtatt ctcctttgta ataaactctt ccgatgttgt
       61 gattatgatt tcttcgagca gagaaaaaca aacccagaaa tgaagagtta aatagaactg
      121 ccattggcaa atgctagaat gttttccctc gctattaatt gttctctgtt tactttgatg
      181 ctcaaagatt gccctgtttt acaagcatat tttcttaatt gtgtcacctt gcactgtaag
      241 tatgtcagag gggaaacatt tgcaagtgat tagatatgga cctttgtgtc accaaatgta
      301 tgaggtacat acccttatag gatataattg tgatctttta atatgcggcc attgacccag
      361 acttgttatt atctattata gtttataata atgtatctct ttatgattaa atgatgatgc
      421 ctggcagaac actatgatta gcatttcagt tatttataga ttatgtcaga gcagtaataa
      481 acataaaatg ctgttaatgt gtggctaatg aaatctggac atgaacaagt ttatgaattg
      541 atataattca tttgagtgtt ctaactgagc tgctggttct cgtcataatt caaaagctta
      601 gcagggttca ccgattaggt ggtagactaa tttgctacaa aaagtcaatg ggttttcatc
      661 gtcttgggct atcatacaca gcatggctga ttgcataagg actatacaaa gtaattctca
      721 taaatatatt tattaagctt aatatgtttt gtgaggttag gatggaatca gctagtgcac
      781 aacatatgtg gaacaaaatc acagtgtgtt agagaccaga aagatacgtt tagtaaaatc
      841 attcaggacc ggatcgatga aggaattatt tggattttaa aaagtgggca attcaatatc
      901 aaatacaaat gagtgccata aagagtgatg cagatgattg tctgaatgtg ctcaatgttt
      961 gttttacttt ggcatcataa tttcatttca tgctacaaat acagtcttaa acttaggtta
     1021 cttaatggta aaatagccaa gtgtatttg
//
LOCUS       KCKM01000932             777 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14790apa ultra-conserved element locus
            uce-1877, sequence.
ACCESSION   KCKM01000932
VERSION     KCKM01000932.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 777)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 777)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..777
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14790apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>777
                     /note="ultra-conserved element locus uce-1877"
BASE COUNT          237 a          146 c          143 g          251 t
ORIGIN      
        1 ttattgatcc ctcaagaaat ctgggctaca tgaaaatcaa taacatccaa gtgtttggct
       61 acagcatgca cttcgaccca gaagcaattc gagacttgat tttgcagctg gactacccct
      121 acactcaggg atcacaggac tcagcacttt tgcagttgtt agagatacgg gatcgtgtaa
      181 ataaactctc tccacctggt caacgtcgtc tagacctctt ctcttgcttg ctccgtcata
      241 gactcaaact gtctaccagt gaagtggtga ggattcagtc tgctttgcag gcctttaatg
      301 ccaaattgcc aaacacagtg gattatgaca caaccaaatt atgtagttaa ccataaatgt
      361 gaagcacaac acaaaacctt gaaggagttt ttacagtgct tttgtggaac agtttatgtt
      421 tggaagagta aatttaaatt gtcttttcaa tatctgtctt atatcagtca atactgttgg
      481 atggcaattt acacacatga acttgctgac aatgaatata ttatacctgc agttttggtt
      541 tatgaatgaa ataaatactg acaccagtct agaagacatt ctacttttta caataaattt
      601 catttgtaat tttatatgtt ccgtggcaat gcttttgtgc attacatcct ctagagggaa
      661 catagaagga taccaataaa gttttgtagc tgaacagtta ttaaaaagaa atgctgtggg
      721 attctttttt cttacacaaa agtagtaacc ttggtatact tttgtgtgtg tttaaac
//
LOCUS       KCKM01000933             824 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14806apa ultra-conserved element locus
            uce-6102, sequence.
ACCESSION   KCKM01000933
VERSION     KCKM01000933.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 824)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 824)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..824
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14806apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>824
                     /note="ultra-conserved element locus uce-6102"
BASE COUNT          273 a          143 c          162 g          246 t
ORIGIN      
        1 tgtgtgcttc tttgaaaatg caaaaaataa aagaggaaaa gtttccacga ttcaggctga
       61 ggatagctct gcaaagcacc aagcagctac agttcagagc agaaatgaat atcaagtgtc
      121 ggcttaactc tgtcttcatg taaagagagg gatgaaggac attgactttt gactacacct
      181 gcatagaaaa ggcttccaga gtggtagtgg cacactccca acatctgctc cttccattga
      241 acttagctgt aaattgaaat tccattgcaa tgtttttaga ctcagttgaa gtaaggagac
      301 tgtcagaaat cctctttaaa ctcaccctta tccaaacagg aagctgacct ctaacctccg
      361 gacgtaacag tacaccagtg gaaatttcat tatccccgtt tcagctgtac taagtgaaaa
      421 ttaattgtgt aattatctgg atgagcgcat gtgtaaaatt ttacaatgtg ccagttagat
      481 taagtaacgt gttagtggca tggtttagtg cagagtcaag gctgtcttat aaaaacggcg
      541 taagaagtct gacaagattt gaaggagaag aacatatgtc tgagcaaacg ttaacaagag
      601 aaagtaatgt aatacttaat accataacct gagtaagatt ttagcttcct ctgacagagg
      661 ttcatcatgc acaggagaga ggttttgtct gatagtttaa gaccatataa tttaatagcc
      721 aaaatatttt gagtttattg cttttcttta agtaccaaat agatgactga ttacaatatg
      781 aaaaataatt tttgtctact ttgtatcata tccattttat acct
//
LOCUS       KCKM01000934             719 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14821apa ultra-conserved element locus
            uce-544, sequence.
ACCESSION   KCKM01000934
VERSION     KCKM01000934.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 719)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 719)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..719
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14821apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>719
                     /note="ultra-conserved element locus uce-544"
BASE COUNT          227 a          102 c          128 g          262 t
ORIGIN      
        1 gagactattg taataagagg tctaaaattt catgtaactg aagtttaaga tttaaaagat
       61 aagtactgtt cagttgacta atcaaatagt cataaaaact cttttctgaa ctataattac
      121 gtttattcag ttctgggttt gatttatttt ttattttaat tgtcagccct gctacaccat
      181 gatgctaata gaaatgttat tgcagccaat atgggctaaa atgatgtctg atgattatta
      241 atgagagcaa taagaaggta tcttcatata aagtcagcat taaaggagta attcatttta
      301 cctgatataa ttggattgta gcatttaaat agcctgggac ttcctcttaa ttgtgattag
      361 ttgtagcttc ttccttttag tacagtattt aactcttcct ccactactac ttctgtttct
      421 tttatgaagt aattaaatgt gaatttctca gtgcctttta ataaatatgt ccaaggattt
      481 agtagctgtt aaatggaata gctgcctgtt agaaatactt acatgcagta cccatagctg
      541 gagatgtgaa gctatcactt cactgtaatg ttttatgtgg cacatcatta tacgaatgca
      601 gcaattgttg ctttggttgc aagaatcaca gcaggtgtct ttatcaggag caattataaa
      661 gctgaatttt aggagaatca aataaaagga gggtaattat tgtctttatt ttaccaagg
//
LOCUS       KCKM01000935             691 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14836apa ultra-conserved element locus
            uce-998, sequence.
ACCESSION   KCKM01000935
VERSION     KCKM01000935.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 691)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 691)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..691
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14836apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>691
                     /note="ultra-conserved element locus uce-998"
BASE COUNT          226 a          141 c          113 g          211 t
ORIGIN      
        1 atgttacatg gaatgcaaaa cataatttaa ataggatggt gcattaaact tcaactattt
       61 ctgatgtagc tctcaaacta caaaactatc tttcttctat tttaatttta aagtaagtta
      121 gcaaacactt ccttcttaat ccccagagac tatctataca gtgacacaaa tgcacaaatt
      181 tatgacagta acataaacgc tcctctgaag taatgtgcaa cattaagtga aatcgtttcc
      241 tggaaagata ttataggtat ctatatttta tttgccatct taaacatatc tgggccttta
      301 tgaccttatt tttaaaatgt atttcctttt cacatttcct ggtgcaaatg gactgcataa
      361 ataagcaatg tgctatgagg cttcagacta gccgataaac cctttcaatt ttcatgccag
      421 cttcttcttt tgtaattcaa atctggctga aaactggcag ctctgaaaac tgaaacaagc
      481 actgccacaa ataccttgta atgctatcga ccttgtctgc ccatgcagtg agaaaggggg
      541 atgcatatgt gtctgcagtc atccagataa cacaactcat ttttttgggg ggataacaga
      601 agccagcccc ggactgtgca ccaaaagcag tcattaccag gcaagctgga gaataagtct
      661 cttcaaaata cacagtgcat ttaaaaaaca t
//
LOCUS       KCKM01000936             668 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14851apa ultra-conserved element locus
            uce-931, sequence.
ACCESSION   KCKM01000936
VERSION     KCKM01000936.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 668)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 668)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14851apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>668
                     /note="ultra-conserved element locus uce-931"
BASE COUNT          211 a          138 c          120 g          199 t
ORIGIN      
        1 cctagggatc tgttttgtct tgaacagctt aaaaagtgtt tgaaagctat attaataatt
       61 tggacctaga tgctgaaaaa ctcccttgat gaaacaaagc tctttttctc tcaatagttc
      121 actgtttgaa atatgtttct ggctgaaaac aacaacacta taaaaacctc actaagaatg
      181 ggaagttgct gcaggaatga aactcccttt ctggctaaca ggggtatgtt ttcctatgca
      241 aatgcagcaa agcccagaaa ttagcaatga ctgctaaatt aacacacttg aagagcttgg
      301 ctggttctaa taggcagtca aatggtcttg ttacactgta atggtgccaa gctaattgaa
      361 gtgattactg ttgctcgtga gcagcctttt tgaagtagaa gtcttttaaa ttatccataa
      421 cataaatgtc agacactatt gtgtaattat actttgtaaa cgctgaatgt cataaggcat
      481 cacaggtaat tgaggtttac agagaagagc tttatctaaa cctaattggg catcaactct
      541 ttgtcactat ttctaaacct aattgggcat caaatttttg tgccagcgga cactccaaca
      601 cctcatcaca gccctccccc catcactgtc agcaggcaaa tacatatcac agcaaatctg
      661 acccttca
//
LOCUS       KCKM01000937             954 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14866apa ultra-conserved element locus
            uce-7607, sequence.
ACCESSION   KCKM01000937
VERSION     KCKM01000937.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 954)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 954)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..954
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14866apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>954
                     /note="ultra-conserved element locus uce-7607"
BASE COUNT          275 a          229 c          166 g          284 t
ORIGIN      
        1 gcccagccac atgggttccc cacagctcac ccaaggtttt gcacaatttt caaatccgca
       61 agccatttag gtccctcttc aggcagaaaa cacaatttcc aggcaggaca taccaatcca
      121 gcaatcaaat cttaggttca gacagacttc tcctctgcct ccagaaggca gctctgccat
      181 tctgtttatt ctcccatgcc cttaattgag ttccttgctc tttcatgtgc attgtaatag
      241 atttgtttta caccaccagg aaacaagttt ttaaacatgt gccatgcagt aaacaccaca
      301 tatattcagc agggaaagaa aaacatattt ggtagagtat agtaatttta cagtctctgg
      361 tttctaataa atttttacag caaccctaaa ctgcagtagc aagttccagt ttattgtcaa
      421 gcttctgcac aacatccctc aacaacacgt caaatatttg ccgaggcacc tgaactccta
      481 acgccgtcct catcggcagg aaacttgtca gattaaattg ccacctcttg tcaggtaaag
      541 ccagatgatc tgatatccct ctgctgctga tgacacagac tgtcctttca ctttggatgt
      601 attatgaatc tccagtgttt ctcactacga gcaaagacgc agctcacggc gaggggaaat
      661 actgcttgct gaccacttta agcatggttt attattgata cagagataga caaaggagta
      721 aaagactcct acacttctta aattctcttt tgttttggtt gccgattgtt tcagggtatt
      781 tgcttacctg tctagggaat caaaacaaaa ggattttcat tgcctcttgt ctcccataag
      841 tgctgtttcc ataacgctgc ccaaatgcat atttactatt tccaaaaagg gattatcatg
      901 cattattgct actctttaca agatctagca gcagaatttt tcaaggaaga acaa
//
LOCUS       KCKM01000938             645 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14882apa ultra-conserved element locus
            uce-5853, sequence.
ACCESSION   KCKM01000938
VERSION     KCKM01000938.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 645)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 645)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..645
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14882apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>645
                     /note="ultra-conserved element locus uce-5853"
BASE COUNT          160 a          157 c          136 g          192 t
ORIGIN      
        1 aggagcacac tcggaaggag tgtgcccttt tggtgatcag tccctgggta acaagaggtg
       61 tttcaaaacg atgctttcac agaggttctt gggtagctgc tgctcgagcc tgtcggtcgc
      121 ttctccaaat cttccccctc atgcgcccac ccagtcccaa atcttccccc tcactgccca
      181 caaagtcctg ctcgggcagc cccgtgaact ccttggccat aggagccagg tccgtccctg
      241 gggaagtctc atgaaggtct gttttgacag catggaaccc atttcaaacc acccctctcc
      301 ttcaggtttc cctccccctg ggcctaagta acactactgt ggcactggct tcaataagta
      361 actttttatt gtgtctaatc atgtgcaaat gtgttaaaat tggtagtttt tagcaaacag
      421 ttatggaaca tattactgta aggcatttgt tggtggcgtg acaatgattg gccccatgcc
      481 acttaaatgt tttatttaat aatgtgggaa tttcagtgtg ttttcctttc attattttta
      541 acttgaaaac agaaacagaa agccccttct ttaaagttaa aactttaccg cctagagtct
      601 gtcaaaagca atataagcat ctggatttta aaaagggagc ttttg
//
LOCUS       KCKM01000939             926 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14898apa ultra-conserved element locus
            uce-1713, sequence.
ACCESSION   KCKM01000939
VERSION     KCKM01000939.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 926)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 926)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..926
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14898apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>926
                     /note="ultra-conserved element locus uce-1713"
BASE COUNT          260 a          179 c          192 g          295 t
ORIGIN      
        1 agccctgtag aattttcctg gttttcatat gtagaaaatc acccttaggt tgttcagaaa
       61 ctatattagg ctgcacaaaa accatccagc gtccttgtca gaaaaaatca gcttgagttg
      121 cagctgacag aatgcagagc ttgcaatgca tctagtgctg ttaaaaacat gtgagcagct
      181 atataagcct cctgcatgaa ggaaacgtat ctctcctcgg atggcagagg ggttaaaatt
      241 tatcaaaaag cgtgggctga attggtattt cccaggaact ttttttaagt cgttttcagg
      301 gcgcaaaacg aagtacttct cattagagct tcagtggtta tcggtaaccc ataagccttg
      361 ttttgctggc tgcttactgg tgcatttaat aaaataaaga tcactcagtg gtgccgtggg
      421 cagcatgcaa ggtgatagcc atatttgctt actgtaaata caagagaaaa tcacacacaa
      481 accggctgta gttttgacaa gtattaagat ccctctttac atctgtactt ctgtaccaaa
      541 gtgcaattag ttttcctcgc acaaggattt ctgtttatct tattctgctt gattacttga
      601 gtataatcgc accgtttgct tcattgctcc tggtagtaag ctccagttta aaaaggggag
      661 gatgagtgtg tgtaaatata cagaattctg ctgtaagact ctaatttatg catctggatg
      721 acagcgtttt cttaattttt ttccctcctt tactctttct ttccacaagg tttggttcat
      781 gtacaccaga ttcctcggct taatagcttg atctgtgatg tgtcagacac gaaggacctt
      841 gcttttagat taaaaaggaa gctgttcacc attgaggtaa gagaaacagt tttgtttcac
      901 tatttagaac ccaaaaggtg gagcta
//
LOCUS       KCKM01000940            1001 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14912apa ultra-conserved element locus
            uce-2811, sequence.
ACCESSION   KCKM01000940
VERSION     KCKM01000940.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1001)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1001)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1001
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14912apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1001
                     /note="ultra-conserved element locus uce-2811"
BASE COUNT          303 a          198 c          177 g          323 t
ORIGIN      
        1 tcaagatcct ttcaaatttt gtggaaatgt ccagtttgat cagttgtcac tttattattt
       61 gttgttactt ctcaaaaagg gagcattcaa atatccttat cattcaaata tcaataactt
      121 ttaatgctgt ttctttacac atgttcagtg tcatactcag tgtcatgctc aacatgttca
      181 gcatgatcag tgtcatgctc ttttgatgct gcttcctcat atccctccaa cagcattaat
      241 tacacaaaat ggcacgtatt ttgagggcct caggctcacc caaaggtgtg aatttgggag
      301 ctcagaataa attatcgagt attcgtttga gctactaact tctgccaatc ttcttgtgcc
      361 tgatgtttat tttctcttgt gtttacccta cagggctcta tgaaaactat ccaaccaatg
      421 cagaaccaga atgctgtgat gtcagatggg gactattatc agatcatcaa tccaaaggga
      481 ctagaaaacc aagtggctca acgacatgtc acaggacatc gctcacagtt tcatcagcat
      541 caagactgtg taacagcaga cttaaactgt gtgttcttgt attaattctc ttacatacag
      601 tacttacagt ctcagcaaca cagaactcaa cgggactggg ctttggaggc ataacaactt
      661 tggaagataa ttcaaccaat gagaaataaa aaaaatgatt catcttacaa gatagaaaca
      721 caacaggccc aaatgagtag tcaaaaatag caaggactaa gtgctttacc ctcagatttc
      781 ttcttgaatg accttttggg taaaacagaa agaatgggcc gctacacaaa caacaaggac
      841 acatgaactc ggctttttat tgactaaaag gctgtatggt gacttaaatt tctcacacca
      901 ttttatacac tgtgttttaa tgtttggagt ttcttttttt tgtttgtttt ttgcacttgt
      961 taatacagga ttttattttt gggacggttt ctcaaagcta a
//
LOCUS       KCKM01000941            1160 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14928apa ultra-conserved element locus
            uce-1813, sequence.
ACCESSION   KCKM01000941
VERSION     KCKM01000941.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1160)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1160)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1160
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14928apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1160
                     /note="ultra-conserved element locus uce-1813"
BASE COUNT          335 a          223 c          279 g          323 t
ORIGIN      
        1 agtctataca cctgttggtg tttgttttat ttgcgtatct ggagcatatc agtaaacaca
       61 gtttagagag caaatatttg atagtatatt gtggtgcatg aaaaaaccac aggtgcctag
      121 gtatatgcag atgtgaaaga attaatgaac attttaaata acagaggaac atttctgctg
      181 agagatgtca gtattcacgt agatacaatt ttatacatat gcatatcacc acgttctctt
      241 tcagctaacc tttgtgcaag agaaacttct gctgatgtca agcgaccagg aggacattag
      301 cagctgatat tggtgcctgt cgggtgctgt tgggtatgtc tccccatcac caggctggct
      361 tccctcgcta ctgccgctga ccttgcaaac agctccgaca aaggtcggaa tggattcatt
      421 gatcagccag gccaagcata tgacagtctg tgccttaatt gaatcccaaa agggggcaga
      481 ctgggttttt attacagagg ccagacgata gcactcatta aaagctccac agactgtgtg
      541 gtttactaat tagtttatta tacagacacc ttgacgatgg gcaaagttgt cattttgccc
      601 tttatcgcac aggggatgtt gttaaaagtt taatcagcta acactgacca gcttagcttg
      661 gcaggctgtg gacagtcatt accgaggtca cccctgctgt agcaattctg acagggtcac
      721 agcatgaaac tccaataaaa agcacgttac ataaggtaag agtgcacctg aaagggaacc
      781 gggaaacgag atgtgctcag cggggagtag gaaacagatg gactgtgagg acaagtgaag
      841 cctgttacag tttctctttg ctcacattgt ttaacatatg ctttttggaa atatgtggag
      901 ctctgagcta ttgctgtgat atgttcatta gaaagcaaga tagcctgaac caagtgatgt
      961 gtgaacagac attaggtatc tctgtttttg agaaagcagg gatgattttg ctagttaagc
     1021 actgcctaaa ggccaagtaa tgggctggtc cggggtgata ggagaactcg cactgagaaa
     1081 actgaagagt gagataacac aggtatctcc ataatgctgc ttttctttcc aacataatct
     1141 gggtaatttc gtaatgtgcc
//
LOCUS       KCKM01000942             527 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14943apa ultra-conserved element locus
            uce-5908, sequence.
ACCESSION   KCKM01000942
VERSION     KCKM01000942.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 527)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 527)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14943apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>527
                     /note="ultra-conserved element locus uce-5908"
BASE COUNT          186 a           88 c           92 g          161 t
ORIGIN      
        1 gtgaacctca cagctgaaac ctcacaacac tggcaatttt cagtgattaa agtaatttac
       61 tttatctata aaatgtaaag atatttcata atagccatac agcaagtaca gggaggtgta
      121 gttttcctgg agataatcag acctctgggg ataaagggtc ctggctgcac ctcatgcatc
      181 gcgagaccca gagggcttta ttatctgatg attaccacac ccccatttcc atgtcttttt
      241 gcttaattaa tcacagtaac attattgccc aacttcagac aacaaaaata atgagagagg
      301 ctttaaaaga ttcaaagact agaggaaaaa caagagatcc cataggaaag tacccatact
      361 gaaacggagg tttacaaatc actgagatct attaaaaatg atgcttacat tttgtaaagt
      421 gccttcttta atataaatat aattatgttt taaatattgt aaatgtgtat atacagtata
      481 aaacatatac ttattttgat tagaggagat gaggttttat ttttagg
//
LOCUS       KCKM01000943            1125 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14958apa ultra-conserved element locus
            uce-2700, sequence.
ACCESSION   KCKM01000943
VERSION     KCKM01000943.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1125)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1125)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1125
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14958apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1125
                     /note="ultra-conserved element locus uce-2700"
BASE COUNT          344 a          224 c          248 g          309 t
ORIGIN      
        1 tggcatctct gcatggcagc tggtgagaca aaacaaaaca tcagatcact gcctagagag
       61 tctattggca actctcagtt gcatctggga acaatggccc atcaaagcta actacgtatt
      121 gttaatatcc ctacctaatc caggcaatgg gaaagaaaag tacaaagtcc tccagcaaac
      181 cctacaacct tccagtcact ctcatctcca ttttcctgag tcttgtaagc ataccccagc
      241 tttcccagcg ctgccacaaa caccacctgg ggccaggtca gaggtgaggg ggcattcact
      301 gctgccagaa ggtatttagc ccccatttcc acaaaataca gagaagctga agaggtcttt
      361 tttcatgcta ccacctcacc agtctaagga gaaattaggg tagtgcagaa cttccctaca
      421 cgggaatact gggggctggg aagcatgttt ctgagggctg ggttatgatt tttgctatat
      481 agaatttttg agctattggg ttctaagcct gcacagtctt aagcttgcag ctattggcat
      541 gtttgacatt ttaaactatg aaataccaac ctattttgaa attgtccaaa tcattagttg
      601 tggaattttc ctagcacttc atgaatacca ctgttaattg ggcaattaac tcgaaactac
      661 agaatatgct gtgatggcat gatatgatat aagccatgta aaagaaggaa cagccaagca
      721 actcagtatg ttgaaagata ttaatgaagt ggcaaaatct gccagaaaaa taataatggg
      781 tgattttaac taccccaata ttaactggtt gaataacaca tctgtacatg gtttggagaa
      841 gcagcttatt gatactataa atggcttctt tttggagcag ctccttctgg agcacagagg
      901 aggaggagtt ccactcagtt atcaatttgt ctgtgtgtgt ttgtgtagaa agcaagtatg
      961 ggtgttctgc taagcaacaa tggccacagg acaatgagtt tgaatctcaa tgatgaagta
     1021 tttcaagtgg taactaaata gttaatggca ggtggatggc tgaggaaaac ccataaacag
     1081 ccatctcaaa gtgaaggctg ttttggagaa ctaaggagtt tattc
//
LOCUS       KCKM01000944             762 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14974apa ultra-conserved element locus
            uce-2168, sequence.
ACCESSION   KCKM01000944
VERSION     KCKM01000944.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 762)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 762)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..762
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14974apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>762
                     /note="ultra-conserved element locus uce-2168"
BASE COUNT          249 a          116 c          112 g          285 t
ORIGIN      
        1 cataccagat taaatcaatg tgggataaaa tgctgttttc tttattagat tctgctcttc
       61 agcaatagtt aatgcctagc attatgcttt ttctgtagat attatagttt taaataatct
      121 tgttttaaaa ttactgttta catcttccct ttaaatttct taggaagctt aaattacatg
      181 ccagtcatac tataatatcc aaaaatgact ttccaaaaag taaaagtggt tgtcaacaaa
      241 aaaggaaaaa aaaacactgt cagaagccag gaaatcacca agcaagcctg ctaattattc
      301 ttaatgggca agatgagcac attaagaaac aaatgaatac atcagtgaaa tgtaattgaa
      361 aatcgacctg gcaatagtgc attgcatctg agaatctgcc gttgtattat catcatcatc
      421 ataattattg ttggttttgt tgttgttacc gctattcagt gagcataact aacagctttg
      481 ctttgtgaag tctcaagctt ttgaggattt gatttttctt ttaatttttg acattcttca
      541 ttttattctc cctttcctac tgccacatga agtattcact atgtatgttt tcaatattta
      601 tattaggata tgttgttgaa atgctgcaag ttaaaacagt ttaccaatat gtttatatca
      661 aatcattgtt ctcattttaa ctgtttcact gtaaaatata tagtcatatt tgatatcaat
      721 tggtcatctt atgcatgaga tttatggaga ttttaaaaat aa
//
LOCUS       KCKM01000945             876 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 14990apa ultra-conserved element locus
            uce-7184, sequence.
ACCESSION   KCKM01000945
VERSION     KCKM01000945.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 876)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 876)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..876
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14990apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>876
                     /note="ultra-conserved element locus uce-7184"
BASE COUNT          242 a          160 c          177 g          297 t
ORIGIN      
        1 aattcttcag gatgttgttg ctaaacattg ctgctgcttg cagtgcgaat aatgctttct
       61 gggtctacgt gaaattattt acaaagcgca gataacttgg ctgaaatttg ttttgttaaa
      121 aatcttgaag ctgttgctgg actctaaaag tgaccttacc tatccagagg aacgcaaaat
      181 gcatcattaa aatgctcagt cttggatttc attaattttc tgactgtaaa attgtcacct
      241 atgtttccaa atgaaatgct ctaataagga agacaggttt atgtggtaag cctttgtagt
      301 tcttcagttc agaccacgct tgaagctttc tcactcttcc tttaggcaaa tcccttagaa
      361 acagaatgtt tcaattttac acattttgtg tcaattttcc agacagaaaa gtagccccta
      421 gacattagac atttagctac ggaaaggcag tttccttcgt tttatttgat tactagaagt
      481 tagattcctg ctgatagttc aggactgtta gtggttacct gactatttga cagaaaacat
      541 ttcctctcct ttatttaacc tttgactcac gaatgtaaaa gttttatcag agctatggtg
      601 ggagcaccgg cgaggtggaa gtctacttac ggcaacaagg gttatgcgtg acaaagtctg
      661 agctcctgcc ttatggctca tttggattaa aggaaaatgc taagtacatt tttaattaac
      721 catgaaatat cttgggctct tgcttttgtg acaggcagtg gctgtacttt tgactaaaga
      781 ccattgtatt ctcaaccagg gaatacgtac tattaaagcg gtatcgcgcc ttttttgcag
      841 attttcttta ttatggaagc gatgttttgt ggcagc
//
LOCUS       KCKM01000946             466 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15005apa ultra-conserved element locus
            uce-4850, sequence.
ACCESSION   KCKM01000946
VERSION     KCKM01000946.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 466)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 466)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15005apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>466
                     /note="ultra-conserved element locus uce-4850"
BASE COUNT          157 a           73 c           80 g          156 t
ORIGIN      
        1 aaaaataagt gaagatgggt agaacttgcc ttttaaacat actactgtac tatgaacaga
       61 gtgtaagaaa aacagcttat aacatatgtg caaccaagag cttttcacaa tattttcttc
      121 aaactcttta aaattacttt taatgacaat tatatttcag ttggacacaa atgtatttat
      181 tttaccctag caatagaaca aaatataatt tctttagcca tttttttcat gagaacggtt
      241 cattgtacag ttgaggaaat atatgaaata aggcctgtgg cttgattgct agtggttaga
      301 catgtattta ttctttgccc taatggaaaa gatttgcagt gaactgcaaa ctgatgcaga
      361 atatctctcc tgcttttgca agtcttgtca ggaatagtaa ggtacagtaa atttgtccca
      421 caggatttta gagcctacgc cttgtatata atacaatgta ggccta
//
LOCUS       KCKM01000947             718 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15021apa ultra-conserved element locus
            uce-7310, sequence.
ACCESSION   KCKM01000947
VERSION     KCKM01000947.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 718)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 718)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..718
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15021apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>718
                     /note="ultra-conserved element locus uce-7310"
BASE COUNT          150 a          170 c          225 g          173 t
ORIGIN      
        1 aggcgctgct ctggtgggat gggcgccggc ggcagcgagg ctggccgagg catcgaaaag
       61 ccggctgacc tcctcggagc agagcaggcg cgtgagcagc cccgagagcg ccggtgcttt
      121 gttctgcagg tcggcagcag tctgtcttcg gaggtacagc ctaccttttt atttattatt
      181 agtttttttc tcactgactc tttgacaccc accacctccc tgccagcctg gtgtggctga
      241 tcaagctgtt caaacaactg gaagacatca aaagttaaac actcattatt ttaatttgat
      301 gctaatcatg tgttaatgag actaatcctt gcaatgattc aggtaatttg cttaatggct
      361 gcccggagta cagattacag caatcagtca cgtctgataa gacgtctgtt gtggaggagg
      421 ttgtcaggtg aatgaggtgg gaaaagactg aggagcaagg tctgatctcg ggtaagtcgg
      481 gagccttcct ggtcagaaga gggaggggga aggcaaaggc tgcctgcaca gcctggcgtg
      541 gcgcggccgg tgcgtggctt ccagcagctg gggagaagcc gctcgcagga ctgtgcttga
      601 gaggtgtgat cctcccctgc cgagggaggg agctctgggt gcgctgttac acccgcatct
      661 gaatcggatg ctcgctgttc ttgaggtctg ttgtgtcact gcaaagccct caggtgta
//
LOCUS       KCKM01000948             765 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15036apa ultra-conserved element locus
            uce-3775, sequence.
ACCESSION   KCKM01000948
VERSION     KCKM01000948.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 765)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 765)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..765
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15036apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>765
                     /note="ultra-conserved element locus uce-3775"
BASE COUNT          197 a          179 c          224 g          165 t
ORIGIN      
        1 tcctgagtcg gaaaggagga gcagcagcca acaaaatgct tttttctggt ttcaccaaag
       61 gtgttgggtc tggaagggcc tgagggtacc tggtagcatg ttttaagagt taacccttgg
      121 gttggtccca aattctggag catgtccatg tcctaataaa ctgtatttct ttaagcaaca
      181 cgactcagac tcaacccgag cagccataga gatatggccc tggaggaacc ggccttccca
      241 ggcacatctc ctgagctccc tctctccctc taccctttca ggaacagaaa ttttgccagc
      301 gctatgacca gctgatggag gcctgggaaa aaaaagtgga acgcatcgaa aataaccccc
      361 ggcgccgtgc caaagagagc aaagtgcggg aatactatga gaagcaattc ccggagatcc
      421 ggaagcagcg ggaactgcaa gagcgcatgc agaggttaga ggagaagcgg taggaagggg
      481 ctgagctggt atcagacagc ctttcttttt ctttgggcat gggtgtggga tttgcctgcg
      541 ggaggagcgg gctgggacgg ctgtcggtac cttttctccc cttctgtgga agacagaagt
      601 cagcagacaa gcagctttgc tgcagcacag agccaagaga gaaggagaat gtcaggaatg
      661 tggttgccca tctggccatg cagagcgagg agcagttccc ttgtgctggc caggactaat
      721 tactgcctta ctggtgggcc tgaatgaaga catacaagac ttgca
//
LOCUS       KCKM01000949             786 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15052apa ultra-conserved element locus
            uce-7081, sequence.
ACCESSION   KCKM01000949
VERSION     KCKM01000949.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 786)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 786)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..786
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15052apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>786
                     /note="ultra-conserved element locus uce-7081"
BASE COUNT          208 a          168 c          156 g          254 t
ORIGIN      
        1 tttttctttt tttctttctc taagccaagc ccgggaatac tgcccatcga tcaataggtg
       61 tatgatgaag gaacttcgtc ctgctaccta tgaccaacgg ctatgttttt tcaatgattc
      121 cgcaggagtc aaaaactcaa caaagcgaat cgcggatgct gtaaagggag catgctgctc
      181 atgtctgtga ccactgtatg caaagcttgg cattagtcac cgccaggccg cctctgacag
      241 ccctgaagtg agggagatta atgtgaggca ggggcacttt attattgtca ttctgttctt
      301 tcacactctg cctctgactt tcaattttgc tccagaatta attgtctgct ccctacagta
      361 tgactgatgc agaaggatac aagtaacata ggcacctggt tctggccttg acaatctgac
      421 tcgttgttgc aggatgtatt gtgtacagtc aaattcaggg acggacgggc atctttcaaa
      481 gaaatcagcc aatgtttctt ttgacttcag tcagatttga ctgtagatta tcctactcca
      541 agaacaattt ttttcttgta gagatgctaa caaaatgcca ctgtcattat taagtaccac
      601 tacacgatac tattgctctg ttttatgcag ctttgtatga ggcctttctc tccaagcttt
      661 cctttttatg tttgaaggta gtaaattagt catgtagcaa tgttaaatcc ctaccctctc
      721 agagttaagc attgctgtga gaacattata tacggtatct ttgacaataa aaatacatag
      781 ctattt
//
LOCUS       KCKM01000950             342 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15067apa ultra-conserved element locus
            uce-258, sequence.
ACCESSION   KCKM01000950
VERSION     KCKM01000950.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 342)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 342)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15067apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>342
                     /note="ultra-conserved element locus uce-258"
BASE COUNT          107 a           69 c           58 g          108 t
ORIGIN      
        1 cttgaagtaa ttttctgtca ggtttgagcc ccttgcggcc tacagcttgt gcattgctag
       61 ctgtgtgata caacaactat ttcaatttat tttacaaact ctggccattc acatgtcagt
      121 tactgttcac caagccggca tctgaaattg tgcagttaac gagttttaca acatttctat
      181 caagagaaac tgtttagcat aactgactct taaggagtta ttatacctct aaaaatccat
      241 tttaaggggc attatttaaa taaaatagaa aaacggttca ctgcctttta aaggggctac
      301 aaaaaaagtc catcagatcc agtgcagtaa tcctcagctt aa
//
LOCUS       KCKM01000951             641 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15082apa ultra-conserved element locus
            uce-2600, sequence.
ACCESSION   KCKM01000951
VERSION     KCKM01000951.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 641)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 641)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..641
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15082apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>641
                     /note="ultra-conserved element locus uce-2600"
BASE COUNT          166 a          143 c          134 g          198 t
ORIGIN      
        1 ttttttttgt ctgtctgaac tttgtctcga tgtgctatgg gccttcagag agctcaggac
       61 atgtttgtgg caggtgaaat tttctgtcca ggcagccatt ctaacaggca gcatcagctg
      121 cccgaggcac actgccttca cactcttttg ctccacagct ttagcttatt ccttttctca
      181 gaagagctcc ttctaatgtc tacacaccag caaacaaaac agatggggtg gtggaaaatg
      241 aataattagc ctctgcacca ctgagttcaa gctaatactc tgaaccaggt atgacatcaa
      301 atcatttcca gtgggacaac aaatgtcacg atggagatga gaatttttca gatgcctctt
      361 gtcagaagca aacacgagaa aggttttaac tcttccagta gtctgcaagt cccaaaggtt
      421 gtgttcgttg gctacaagat ggaaatctct tcttttctca gcgtagcaat ggccgccacc
      481 agcacaagta atcccttagg gcccagcttt tctacctcag gcctaaagat tttttttttt
      541 tttttacagt cttggcatgc atagtctatt tgtgtctatc atgtaggaaa atatacaggc
      601 ttcctgaaca ggttcgtgtt tgttggctta gaaatggaaa t
//
LOCUS       KCKM01000952             581 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15096apa ultra-conserved element locus
            uce-6447, sequence.
ACCESSION   KCKM01000952
VERSION     KCKM01000952.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 581)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 581)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15096apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>581
                     /note="ultra-conserved element locus uce-6447"
BASE COUNT          206 a          106 c           98 g          171 t
ORIGIN      
        1 taaaatgttc tttatgtgca agacaattta gcgttacaga tttctagtta aataattgca
       61 aagcgatgcc agaaacatat tctgaagctg ataccccaat atgaggtgaa aaaaatattt
      121 ttgtgaccat tctttgtgat gaaggagttc ctctgtcctg acccatttac tgagcacacc
      181 taattggaca tcatctgatc aaagttagat acctgacttt ggattatgag aatcataaac
      241 ttgcttacgg tctatctggt ctgcaaacac ttccccatag atcatccagt aaggcatgta
      301 aaaaatgttt ttcgccagct tccatgaagg ctcctcattg gggaaaagaa tagcttgtct
      361 tgcgacacca aagctcatca gaaccaccaa catgatgatg acaaagtaca tcatgtctat
      421 catctgaatg taatgacagg aaaagagaga gaaagagaaa caagggacaa gaattagagg
      481 aatttattta tccatattcc cattactata tgctaagaaa aaaatctgta aattttagaa
      541 ttttcaaaaa caaattttga aaactcattc tcacttttat a
//
LOCUS       KCKM01000953             841 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15112apa ultra-conserved element locus
            uce-740, sequence.
ACCESSION   KCKM01000953
VERSION     KCKM01000953.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 841)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 841)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..841
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15112apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>841
                     /note="ultra-conserved element locus uce-740"
BASE COUNT          215 a          189 c          163 g          274 t
ORIGIN      
        1 aaaaatcccc tccaacagct tttttctttt tgttcttgct aaagcaaaat aaaaaaaaaa
       61 agcacgagca tttgttcttc tctactttgg aagcaccccg tcccataaat attcattaaa
      121 aagaagcctt taaaaagtgc taagaaatag tttatactct tgaaaaggcc agggtctggc
      181 atttgtgact tgcttgggtt ttttccccct ttctttcctc tctattttca agtatttggg
      241 aagagaagtg tgtgcagggg cgaaggcggc cacgcgagtc ccagcagctt tctttgagca
      301 gccacgtgtc cgtctccaaa ggactctcca agttaaccac cttcattgta catttaaccc
      361 acatcgacag cgtcctcccc tccataaaag gatttgcaat ttcaagatat tctagcttaa
      421 atgtttctga cagttccctc gctttttttc catgagctgg gttatttatt ttagctgtgc
      481 caaatgggtc accttggaga gatgtttgtg cgcaaagagt ctttgcgcgc attcagactg
      541 aattttttcc aactttcctt gacggggaaa ccagctgctg gtttgtgaaa agacggctta
      601 ttaattgttc tttgtcatgc agaattgctt gatttctaaa gaaacttaca aagggtcttt
      661 ttcaggattc aagtattttg tttcgtgcgc atttccaacc catcaaatca gctgcaggca
      721 tcttaccgtc taccagaccc aggtactgac tgcctgctcc ctttgtgtgc ctttaatgct
      781 cttgtaaatc gagcagactg atttgttaca agctgctctt ttaatctgat agataagaga
      841 g
//
LOCUS       KCKM01000954             733 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15128apa ultra-conserved element locus
            uce-1456, sequence.
ACCESSION   KCKM01000954
VERSION     KCKM01000954.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 733)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 733)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..733
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15128apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>733
                     /note="ultra-conserved element locus uce-1456"
BASE COUNT          230 a           96 c          148 g          259 t
ORIGIN      
        1 gtttatatat aaataaaaat aaataaataa atatgcattc agtgtctttc tgcatattac
       61 agatatataa taggcagaca tatatgttga aatctatgtt tcacatcaaa cctctacagt
      121 atgcttcatg agggagacaa gacccatgtg ttttgcagaa gcttttaaag ctgtttcatt
      181 tattttatta gcctttaatg aatgtaatta gaacccaagt aattaaatgc aattgtgctc
      241 agtatgttcc tgttgtaaat tgccctaaac aatgtgcatg gtgtgaacaa atttgtggga
      301 ttaatagagg atagataatg tttttggata gtatttcaca ctaaacggcc gcagagagaa
      361 acaaagaagc tggcgcagtg tcattaatct tagtcaactg gcagttctgg tgtaatttgc
      421 atgacttagg cagtgacaca agatggggct agcttgggat gggtgttaga tcactaggat
      481 acatatgtat ttatttcttt ttagtaccct gatttacaag tagaaagaag tttgtttgaa
      541 gaaactgatt cattctattt tcatcttagt ttttatcata gattaataga attactggca
      601 gtatattgta tgtgttcctt tgtttttata gttagcatat tggtttatgg atattaaaaa
      661 acatctgtgc atccttgtca tcacagaaga aaggcagatg tgctgtgatt ggatagtgtg
      721 ttgctagtgg aat
//
LOCUS       KCKM01000955            1066 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15143apa ultra-conserved element locus
            uce-5422, sequence.
ACCESSION   KCKM01000955
VERSION     KCKM01000955.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1066)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1066)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1066
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15143apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1066
                     /note="ultra-conserved element locus uce-5422"
BASE COUNT          351 a          221 c          185 g          309 t
ORIGIN      
        1 acctacacaa atgtatatac atgttcagta ttagataagt tatgtatata ttctatacca
       61 tgggaagagc acactgtatt tgctgttgga taaatgacta gttgagagca aagtaccaaa
      121 gaggaaaatt atgccctgaa atttgactgg atgattatat ttagaccttg aaaggcccac
      181 tgaaggggga atcatctgct ttactaagta agcccctgga ataagcactg gatgtacagt
      241 atcagtctct aacctcgcaa atcagtacaa cgcaggacac tgcatggatt acaaatgtgc
      301 gttaaattac atattgttac agattttttc cccccttagg atgcactcaa cactttcctc
      361 cttcctgtct gacaatatgt tgccatgctg taaaagccct aatgcccatt tcaacgatta
      421 gctgtacatc agcattacta cttcaaatcc acaagtttca catcaagcat taaatgggat
      481 gaatattgat ctgctaaaga ggatttattt atttctagct ctatccaaag atcaactact
      541 agcagctttt ggtggatctg ttgagctctc acagcgcaaa gctactgcat acatgacact
      601 ggacttgaca tttcagttct ggaagaaaac caaacagtaa attcactgca ataatcctag
      661 ataaatcaga tgatcactgt aaaagctgag atagttaagt ggtctatcag aagaagtcca
      721 aaggatgata ttgaactgtt gctacatagt aacctctcat gacaacatgg cacaagatca
      781 ccatatcgga tgccaatatc tttgccttaa aaaaagcaca acgtcttcag attatcttgg
      841 aacacttcac aattatggtc tgagcggaaa agcatgtatc ccttgtaagt ataatcagat
      901 acgtatcaat atagcagtat ttacccattc attccttttt tggtcccgtt cagtcagtaa
      961 cacactaata actgtataat gcattcaaga aatagagaga caaatttcag tcctcacaga
     1021 acagccagca ggtttctcct aacactagag ctgtcctcta aatgtt
//
LOCUS       KCKM01000956             831 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15158apa ultra-conserved element locus
            uce-7617, sequence.
ACCESSION   KCKM01000956
VERSION     KCKM01000956.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 831)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 831)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..831
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15158apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>831
                     /note="ultra-conserved element locus uce-7617"
BASE COUNT          278 a          151 c          148 g          254 t
ORIGIN      
        1 aggaagttgt agaactgaaa cagatgctat tttctatttt aggtaaaaat tcactagtat
       61 tggcagcaaa accctttttg actcatgaac tccgctcctg caaagtgata cagcagagta
      121 cgcggaatga agaattacgc atgcatccaa gaagatgtgt tcttagccag tttggggttt
      181 catctcccat gctcctcagt caattataat taacatctgg agtcttttta aggcgagcat
      241 tgtttgtacc aacattactt aatctttcgg ttagcttgtg cttaaacagt ccacagagga
      301 ccgaaaaaat acagcaagga agagtttatt tctcgtaaag taactggagt cttgttatcc
      361 taaagtgcta tcagttaatt tatgactatc agagtgggtc agactctaat caaattgtag
      421 aaacatttcc aaagtgatta ttcaatcaaa tgactaacat ggttaattag gagccataaa
      481 cattgctctg aagttcatca aagtaatgac ttgcccagaa aaattactgc taattaaatt
      541 gcctgctgct ttcatttcta ccttatctaa taaaaagacc aaccaatgaa atttagcact
      601 gcagttttaa attgtactaa atgcttgact aagacccaga agtattttta caagctaagc
      661 ggagctactt caaaagaaaa cattttagtg cagaaattac agagcaatta tatgttttct
      721 tctccttaaa ggattgtttc aagacaacaa ataagacaga agtaggtata aaatactccc
      781 agggcaggat ccaagtgcct gaggtgactg attctattcc cttttagtaa t
//
LOCUS       KCKM01000957             900 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15173apa ultra-conserved element locus
            uce-5889, sequence.
ACCESSION   KCKM01000957
VERSION     KCKM01000957.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 900)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 900)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..900
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15173apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>900
                     /note="ultra-conserved element locus uce-5889"
BASE COUNT          295 a          158 c          146 g          301 t
ORIGIN      
        1 agtagtacca taattattaa aatgaattta tgccttaaat aaccaaaatt aaattccata
       61 actgcagtgc aaattattta ggtgaattaa attcgaatat ctcctcctgt tcagtgttta
      121 attgcagcaa atttgagctg gatccaggat gtgtttaaaa aaaaaataaa tgaaagaact
      181 cgtgacatcc ctccatatca aaatgttttg gtaatcattc tgtttaaata gcaacatttt
      241 atttctttaa gcacttagat tcttgatctg tatccatatt catggaggtc tgctgtaatc
      301 cactttacca cttaatgttg caattcaaat gttcagtaag aagcaaagcc ctctagaata
      361 aagcatgaat attaccgtgt ggggctgtaa agagaagact attagaatat atcaccaaca
      421 cactagggga ccatttagtg cactgctcta aatacatcat ttaattacaa tggagacatt
      481 acttcatgtt tctactgatg taagtattat tagaattcat gatattcgca ggctactgtg
      541 ggccattaca ttggccataa gctattccat aagatttact actaaaggcc cgcaagggta
      601 tttgagcatt catggattct gtggcagtag gcttttatct aagacacata agtgagggac
      661 aaccgagtta ttatctctaa gaaacatagc ttaatatttt ggattctaaa ggttaaggta
      721 ccataaatcc tgaattactc tgagatatca cataaaaaga catttttatt ttattttact
      781 ctactctgcc tcttaaaata ttttatgatg gcagtttctc gagttgtacc atgttgttta
      841 cattcagtcc ctggatgcat caaaaccact gacacagcat ttcctttaaa ctgctgtgat
//
LOCUS       KCKM01000958             499 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15188apa ultra-conserved element locus
            uce-5072, sequence.
ACCESSION   KCKM01000958
VERSION     KCKM01000958.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 499)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 499)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..499
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15188apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>499
                     /note="ultra-conserved element locus uce-5072"
BASE COUNT          150 a           84 c           85 g          180 t
ORIGIN      
        1 taagcactgt aagtacttca cacatctcct tttaagtaga atatattgaa catttcacaa
       61 aatgacctgc agacctttgt ggttttagat atgttccatg tgtacttata agacaatatc
      121 tacatacttt tctgatatat ggttttagtc tggctcttga agtacaaaag tctgatttat
      181 ataagaccta ctcagataca ttaagtcagg ttaattattt ttcttatcag gagatgagag
      241 ttctttaact ctcctgagtt catttttgtg ccttctaacc taaaaagaat tcttaagggc
      301 tattataaga tctttattat tcacttgtgg cttattccat tggagctact tgaaagaaat
      361 caagggtccg taataatagc tgctatccta acctggtaat aggtagattc atctttgtta
      421 gagtggtttg agagtgccta ctgtaatagc tctgatttgg agcagctctt cagactgata
      481 ataacgtaca actcaaaat
//
LOCUS       KCKM01000959             693 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15204apa ultra-conserved element locus
            uce-3637, sequence.
ACCESSION   KCKM01000959
VERSION     KCKM01000959.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 693)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 693)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15204apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>693
                     /note="ultra-conserved element locus uce-3637"
BASE COUNT          241 a          108 c          127 g          217 t
ORIGIN      
        1 taaacattgc attagactaa attgtccatt acacttttat gcaagacagt gtaattacat
       61 gaaaaatagc ctcaacagta agaataaaat tgatcatagg atagtgctaa tgcatttata
      121 tgcaatgaga gttggtttaa ttatagtaca tttaagattg gtatgccaag ggcaataaac
      181 tttacagcaa catacggaag tttaataagc atgaaacatc gtaagaacaa tgtagactaa
      241 accttccttg catccgaaaa gctgaaatgc aaagaagttt ttatttattg cctcaggtaa
      301 aaaagtctgt agaaacagat aagtgatgac aaagctttga tgttaataaa cccaaatgga
      361 agtcaaaaat caaagtgtgt aaacggctag gttataaaaa gaaagatgac agagttatac
      421 cctgtaatta ggtataattt gtgcttttgg cacagctatt tgtccagcat gaatgagagg
      481 ttgtcttatg ttttcttgcc cctgtataat agaattgcag tacaggcaca tcccacttaa
      541 aacctcctta ggttgttttg gtttggtctt ttgttttttc caagaagcat ttgaaagcca
      601 catgcatatt gatatcccct cttatgtgaa tactgcagtc gatgtgccct tcatagtact
      661 tgaaaataat cataagctta gtgtttataa agc
//
LOCUS       KCKM01000960            1044 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15219apa ultra-conserved element locus
            uce-6642, sequence.
ACCESSION   KCKM01000960
VERSION     KCKM01000960.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1044)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1044)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1044
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15219apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1044
                     /note="ultra-conserved element locus uce-6642"
BASE COUNT          282 a          318 c          224 g          220 t
ORIGIN      
        1 ccctgggcag ggccatcctc agcacatgca gcagatggga aactacatgg ctcgcgggga
       61 tttttcgatg cagcagcacg gtcagccgca acagcagagg atgaaccagt tttctcaagg
      121 ccaggaaggc ctcaatcagg gaaacccttt catcgccacc tcaggacccg gccacttgtc
      181 tcatgtgccc cagcagaatc ccagtatggc accttctttg cgacacccag tccagcaatt
      241 tcaccaccat ccccccactg ctctccatgg agaatcagta gcccacagtc ccagattctc
      301 ccctaatcct ccccagcagg gtgctgttag gccgcaaaca cttaatttta gttctcggag
      361 ccagacggta ccctcaccta ctataaacaa ctcagggcag tattctcgat atccttacag
      421 taaccttaat cagggattag ttaataatac agggattaat cagaatttag gccttacaaa
      481 taacactcca atgaatcaat ctgtaccaag atacccaaat gctgtcggat ttccatcaaa
      541 cagtggtcaa ggactaatgc accagcaacc catccaccct agtggctcac ttaaccaaat
      601 gaacacgcaa actatgcacc cttcacagcc tcagggaact tatgcctctc cacctcccat
      661 gtcacctatg aaagcaatga gtaatccagc aggtacacct cctccacagg ttagacctgg
      721 cagtgctgga atgccaatgg aagttggcag ttatccaaat ataccccacc ctcagccgtc
      781 acaccagccc cctggtgcca tgggaattgg acaaaggaat atgggccccc ggaacatgca
      841 gcagaatcgt ccgtttatgg gtatgtcttc gacaccgcgg gagatgggtg ggcacatgag
      901 accaaatggt tgtccaggtg ttggcctcgc ggatccacaa gcaatgcagg agcgactaat
      961 atctggccag cagcttccca gtcagcagca gtcttttcaa cagcaaatgc cgacctgtcc
     1021 tcccatgcag cctcatccag ggat
//
LOCUS       KCKM01000961            1287 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15235apa ultra-conserved element locus
            uce-353, sequence.
ACCESSION   KCKM01000961
VERSION     KCKM01000961.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1287)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1287)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1287
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15235apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1287
                     /note="ultra-conserved element locus uce-353"
BASE COUNT          347 a          272 c          272 g          396 t
ORIGIN      
        1 actttttgtt ctgtttcagc agacgacaga aagccacatt gtgtgaaatc tcgtctgcag
       61 cactgcagct ctgcaaaaat atctcctcac gctacaacgg cttcaccccc actacctttg
      121 gctgcgttgg gagctcgagc agagatgagt gaacagcatt ttaagtacta tgtttattca
      181 gtgtgctcta agcagggtta gataatacga tatttataaa gccctattct ccgtatactc
      241 gagggctgcc cgccttgcta gcactgatgc cgctgaacca atattagcag cggtgagggg
      301 tggctgtaaa ttttgcctca tgtagacaag gcttacaagg taagcaggca aacccctggc
      361 tgcaactgca cgcctaggaa tggaaccttt tatttgctgt catagtgatg acttttaatt
      421 gtcccaataa acaagctttt aaaaagcttc taaaatgttc tctaataaca cactttggtc
      481 tttagccata gaaatgcaga aataattaga agtgccattg tgtacagtgc cttctggact
      541 gggctgaagg tgaaggagaa agtatcatgc tatccttgtc agctgcaagg gtaattactg
      601 ctggctgaaa ttactcaaca tttgtttata agctccccag agcatgctgt aaatagattg
      661 tctgttatag tccaatcaca ttaaaacgct gctccttgca aactgctacc tcctgttttc
      721 tgtaagctag acagagaaag cctgctgctc acttattgag caccaagcac tgaagagcta
      781 tgtttaatgt gattgttttc attagctctt ctctatctga tagtacattt atagtttgct
      841 gggctccaag actggcatgt tgcatcactt tcatttgctg tagtgagagt gaatagcttt
      901 atttctggag gctgtatgca acagttgatg ggaattttgg aatagcaaaa gcatgggagt
      961 atctacagac actcgttctc ctcctgggca atggtgtttt tccatttgcc tttcaaatgc
     1021 tgctgcattg gttccagcag tggtcacatt gcctaaattg tcctttgaag gatgagaagt
     1081 attttcataa aaggttagaa agaatgtatt ttccttagca ctgaatttca cagtacagca
     1141 ttgtcctgtc cattatgacc tgagttgtat gaaatagtga tgcagccaca gcctgtctgt
     1201 ttgatttgct ctcagcatga tttaccacat catatcacaa cagcccaggt atttccaata
     1261 aatatggggc caaattcact gctgaca
//
LOCUS       KCKM01000962             814 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15251apa ultra-conserved element locus
            uce-5901, sequence.
ACCESSION   KCKM01000962
VERSION     KCKM01000962.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 814)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 814)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..814
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15251apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>814
                     /note="ultra-conserved element locus uce-5901"
BASE COUNT          274 a          170 c          118 g          252 t
ORIGIN      
        1 gtaagaatca aaaccagctg catttactgt cctcctaaaa aggccgtgct gctgtaccaa
       61 aatttgtggt gttctgtaac tactgaaatt gcgatacaag attgcattca cgtttgtctc
      121 accctaagta atactatttc ctacaactgt aaaggaacca cactatcata cactatgcat
      181 tatcatatca taatatattt aaaagaactg gcacagctac aatagaagcc atccttttct
      241 gtagcttgtt ctttgcaaat cacccaaatg ctagcagttg aagagagcct ttgatttctt
      301 ttcatgttgg caccgtaaac cccctcttgt tcgatacaca catatccctc aacttctgtc
      361 aaaagcaaga acaaatttcc taaccaaaac tgaaaagtcc ttggcttttc aaatgactat
      421 aaattgcatg gctaagtgca tatggccaca gggctgtcac agttactttt cttgacaatt
      481 catcatagca tactaattct gtaatatcat tactgtgtct cttctcactg tactgatcca
      541 gccagttaat ttaatcaact aataatagat tcagaaatgg atgcaaaggg ccctagcact
      601 tcaaattata ttactagaga tgcacagcag tgaaagcaac atattctgcg cttgccatta
      661 aatataatct tccccaagta agttggagat tctcctttaa aaggaaagaa aaatatttgc
      721 aaagtttaga aaatttcttt ttcaacagga ttaaaaaaag tttatttctc actaagcata
      781 acttacaatt acatcgcttt aatttgaaga aaaa
//
LOCUS       KCKM01000963             815 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15267apa ultra-conserved element locus
            uce-6087, sequence.
ACCESSION   KCKM01000963
VERSION     KCKM01000963.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 815)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 815)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..815
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15267apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>815
                     /note="ultra-conserved element locus uce-6087"
BASE COUNT          218 a          105 c          162 g          330 t
ORIGIN      
        1 ttttttgttc tatatgtggt tttctatagt tttttgtttt ttcagcttaa gatacagaca
       61 gaagtcttgt gtaatatggg tataattttt aattgtttgc attattttca aagttcaagt
      121 tatcactttg agattactat aaatacactt aaaattatct attttaaatt aagaaaatgt
      181 tagagatatt ttcatgggtt caatgacctt tcattttata agcaatgggc atggtacaga
      241 gtggctgtca tgtaaggtac ttgaagattc ttagtttaat tctatttttg caataacctt
      301 gacttttttt ctgacttctt tgagttgtgc atgtaatgag tccagtaaat gctgaaaatg
      361 gggaagagta aagtatttat ctaaaataaa agctattggg gaggggaaac aatgaatgta
      421 tccatctgta catgatctac atgctgtgga tgccttttcc tatttgttta aactgtgttt
      481 cagcgaggat gtaattgccc ttgtgtgtag ttttaagcta atgacagtca tcaactggtt
      541 ttgtgtgaaa tggaattcat ggtatttttc tgtaacttta tccccatggt gagtctgtac
      601 cacacgctct ctttcatact ggtgccgaag gccaattccc gatcgttttg gttcactgtg
      661 tttttttttt ggtctagaga ggattattgc cacagtatat tttatttatt cattagattt
      721 tagccttgta agttaaagtg ttctaaatga tgatgttaac aggtatttgt ccctttactg
      781 gtttttttgg ggttgttaaa agatagggaa tgaag
//
LOCUS       KCKM01000964            1140 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15282apa ultra-conserved element locus
            uce-2518, sequence.
ACCESSION   KCKM01000964
VERSION     KCKM01000964.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1140)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1140)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1140
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15282apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1140
                     /note="ultra-conserved element locus uce-2518"
BASE COUNT          201 a          328 c          366 g          245 t
ORIGIN      
        1 gtttgttccc gtctccattc ccactctcct ttatataaac caaaaataac ctattctgaa
       61 aacatggcag aacaagggtc tgtctttatc catccttagt gcacgagggg atggaataag
      121 ggagtgggga taaagagggg tgtctctagc cccagtgcat aagagtgtgg gcttctacct
      181 cttccgcagg gaaggatgct gggggggaag ggggagttct gtctcctcag cgtggagctg
      241 gaggcgtgac ctggagaaat gacaggtgct ttctctctct cctcctgctc cccccttcct
      301 cctcctcctc cagagcaagg gtaggtaggc agcacagaag ggtcaaggat atactctctt
      361 tctgtatgtt cctccctccg gtgccagggt gcgtgggtag catgggtctg tgcgtgcccc
      421 tctcttttta gctcctccat tgcagcagtc agtcagtcag ccagtgagtc cctccagagg
      481 agatggaggt ctcggggcgc ccccctcctc tcacctgacc ttttcgctct cagtcatttc
      541 ccaaagtccc aggttgagca ccttgaggca gggcagctgg gtgatgcgct ccaagccccg
      601 cttggtaatg cgggtgcagc cgtagagatc gatgcccgtg agctggctga ggtgttcagc
      661 gatgagctcc aggcccttgt cggtgatgcg gacgcactgg ccgatgttga gggtgcggag
      721 cccgtgcatc tgtcgcacca tgcggttgat gccctcgtcg ctaatgtggc aggagcagag
      781 ggagagggag cgcaggccat ccaggccctg tgcgatatag gctaggctct ggtcccccac
      841 cttgtcgcag aaggagacgt cgaggccgga cagccgcagg ctgcccatgg ccagatgcat
      901 gatgcccgtg tcgctgatgt tgtcgcagga gcgcaggttg aggctgcgca ggctgctcat
      961 gtgcgacagg tgcagcagcc ccgcgtccga gatgcccccg cagaagctga ggttgagctg
     1021 gcggaggcgg cccagcccgc gggccaggtg cttgagcgag aggtcgctga gcttctggca
     1081 gtcctgcagc gtgagctgct ccaggcccag gcagccctcg gccgcgctgc gcgtcatgcc
//
LOCUS       KCKM01000965             867 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15298apa ultra-conserved element locus
            uce-6827, sequence.
ACCESSION   KCKM01000965
VERSION     KCKM01000965.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 867)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 867)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..867
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15298apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>867
                     /note="ultra-conserved element locus uce-6827"
BASE COUNT          281 a          173 c          153 g          260 t
ORIGIN      
        1 aaaacgaaaa agcacagggc aacattacaa cttccatcta tttttagtgc aacttataca
       61 gaaaatgcaa ttgaggaaaa ggactgctcg cattatagtt tacaatttaa agcaaaaata
      121 tggcctgcgt ttttttttct ttttctgtca atcttacatt tctccaatga gactgtgaga
      181 aatgtgcaaa gttatgtgat cgtttctgac agttcttggc agctgggcag gctagcattg
      241 gaaaggatat ctctctccag atccaagatt aaatttggac tgaaacacag ggctcattta
      301 ggcagcaatt aaaggacctt atagactgag ggagaatgaa atgataaatg caaagaggct
      361 tatttaatgg ggatattaag taaactgctg gtaaaaatgc ccatttatca tccactgatt
      421 cctaattggt ttcctgttcc tgcctgcatg tggcattttc agaaggaatt accttccttt
      481 agtgcgactg ttgcaaatgc aataaatcaa gcccatagat ttctagctaa tttagatgga
      541 gactaaattg gagccaaagc atgcaagagt gcttgcaatt aatgttcatt acaactttta
      601 gcttcaaaaa caggaaggat cattttaatg caccattccc aagcaaggac actatttcag
      661 gacttggcca ccctttgtat gttcaacaaa aatcacttgc ctttctaaga aacttgcctt
      721 cctaaaaact tcctaagaac ccaggctgag gtctagcaac cctttaaaca cctgtatttc
      781 aagaaaaaaa cctgcctttt gttttcatta tatgtctcat ctatctataa aggccaactt
      841 gcacaaaaat agcttacatt caccgca
//
LOCUS       KCKM01000966             893 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15313apa ultra-conserved element locus
            uce-3, sequence.
ACCESSION   KCKM01000966
VERSION     KCKM01000966.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 893)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 893)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..893
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15313apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>893
                     /note="ultra-conserved element locus uce-3"
BASE COUNT          276 a          172 c          202 g          243 t
ORIGIN      
        1 gatgaacagc agctgcagct ttcctgacct aggacccggt cctgctaacg aatcctctgt
       61 tccctgcaca cagctgctat tcaaaaaata aaaggagctc tgcattatca tttttaagct
      121 agtaaccgta gaacagcgca gaatagatga cacacttact gtaatgtccc atgaagcaaa
      181 gttcccatct agagagagag gcactcttat tccactccct gcaaaagggt taaccattat
      241 gaagaaacat tatgccagac attagcagac agcctactta gatattacat ttttccatac
      301 atgataaatc ctgggtaaac ctgtttttct ttttaaacac cttgcagagt gaagcctagc
      361 actgcatcta gttgccaaag cacaatcaat atggaaggag cggtatttta tgattggaga
      421 agttgttgtg tttttggtgg tgaaattcat tatttagtat ctgaaccctc agcatttcag
      481 tatcatttat tcataaagtc cctttttgcc aggaggaaat ggatacagct gtagagagag
      541 agagtgcgag agagggagcg ggagagggag tgagacggat tgatgatatt gatcaggtac
      601 catcttgaaa caaaggctag gtgctctatt ttagttgaca actgtgacac ataaaaaaca
      661 agcaagagag ggggaaggct agggccttga acatcacagg ctttaaaaag cgtttgaaga
      721 aaccattatg acaagcaggt ctaggcaagc tgctgcaaaa atgtattcag aagagtcatt
      781 aaaaaatgat gctttgtttg ccttgtgaat atgaggtttg tagctagctg cagagcactc
      841 tcctacagag gaaatgatga ggtttttcat gctgcacagt cgcttctctc ctc
//
LOCUS       KCKM01000967             909 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15328apa ultra-conserved element locus
            uce-5902, sequence.
ACCESSION   KCKM01000967
VERSION     KCKM01000967.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 909)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 909)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..909
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15328apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>909
                     /note="ultra-conserved element locus uce-5902"
BASE COUNT          294 a          168 c          145 g          302 t
ORIGIN      
        1 ctgaactcta gttcttcaac atctgaattt tattatttgt gataatgagc actgttgagc
       61 atgtgggaag atttagatca agtgagacag caagccaaac ctgaaccttg accttctttt
      121 ccagcctcct tcatgatgtg ctacctagta gtttttataa aacagttcat ttttaaaatg
      181 acttttttct ttctccattc aagaataacc aaagaaaaat gaatttgtgc tgtttctggt
      241 ttatagcaag gtacttcaca cgtttctgtt tattgtaact ggccagaata caattacagt
      301 agctgttgtt cagtccatca gtgaatatat gtgacttgta taatgaactg tagtgggtca
      361 aatagtagtg actaataaga ctaataagac ttattctatg ttggaactaa caaagccttt
      421 atcagtactt caaccattct gcttacgtgg cctcattgtt aagattatgc ctttcatcta
      481 tgggaactaa tccctttcat atacaatttt agcaagaagc ttataaaatg tgtattagag
      541 cagtattgac ttgtccaaca ataaaaagta caattaggct tccaacacag agcattacta
      601 atttgcataa aaacctctct aacccactcc ttttactgca gaatataacc aagaggttac
      661 attctgtacc acgcaccagt aatttactgt aaaatcagta gatagctgta cctctgtaat
      721 agtgttcact ttctttgtga aaatctttta aaatgaattt acatgccaaa tgtatcaata
      781 ggaaataata ttaaagatca ttacactgaa tgaccaagta caatgggttc ctttgctaat
      841 gtcccataat gcaataactc aagacttacc tattgagagt acctatactg atagagtcac
      901 gcgtagggt
//
LOCUS       KCKM01000968             598 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15342apa ultra-conserved element locus
            uce-4518, sequence.
ACCESSION   KCKM01000968
VERSION     KCKM01000968.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 598)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 598)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15342apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>598
                     /note="ultra-conserved element locus uce-4518"
BASE COUNT          189 a          130 c           90 g          189 t
ORIGIN      
        1 tttttgagaa ggcacggtta taatattcct gcaatgtctc ttggttttga aatgtggcat
       61 attattcagc ctgggtcctt tgatgtgtgt ttttccctca atccatgctc caataattct
      121 gtcatacaga gaactgaaaa ttaagttatt ctcaccagca atactccccc acaaagaatc
      181 tatcaaaccg tagatataaa cctcagaaca atccctgcca ggtttctcat gcaaatgctg
      241 cagaaaaact tacaagagca ctttaagata ttgagaaccc ttcaatacaa cccagtataa
      301 taacttttac ttgctaattt ctatgggtca gttgcaaagg aatagacctg tcaatctttt
      361 tcagatgtag cagaatttgt ctgtctacaa acagggatgc tttgttgttg ccatagagac
      421 taatcctcca ctttccttct gttgacacag ctagtcacac tctaaactac ctgatcacac
      481 ttttaatagg cagctgactc cggtaccgca aaatgctcaa atcaagttcg taacacttga
      541 cgcatctact gttgcttttt aaaaataata ttaataatat caacaataat attaataa
//
LOCUS       KCKM01000969            1107 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15358apa ultra-conserved element locus
            uce-4201, sequence.
ACCESSION   KCKM01000969
VERSION     KCKM01000969.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1107)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1107)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1107
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15358apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1107
                     /note="ultra-conserved element locus uce-4201"
BASE COUNT          311 a          234 c          220 g          342 t
ORIGIN      
        1 acgatgtttt cagtacaaaa gaagcagcaa aaaagtgtga ggagaataaa agtctggatc
       61 tctccccacc tccaaaagtg agaatagcaa ggcccatttt ctttcttttt tacatgaaac
      121 acggaaaaaa cacaagcgag acattttctg gtagaaacag gcgcatacat gcaaagcatc
      181 aagctggaat actctaaaat cttaacctta aggaccaaac cccaccaaag aggaaaagta
      241 gacagctttc cagtgtaaga gcttcatggt ctccagcttt cagttgttcg ttcaggatag
      301 ctgcaggttc aaactgccag gcccgactcg ttgtgttaag gtattcttaa agctttctct
      361 tcctacactg ccagactgaa tgtcaccatg ggactggttt gtaaggtacg atgattctca
      421 gagactgaac ctgccgtgtg accaagatga catttccatc ctcaaagaag ccacatgtac
      481 ctttctgaca aagctgtgtg aagtattaga atctgatgct gtagaaagat cctagttgcc
      541 tttgtgtata tttactgcct gcttgagtgt ttctctgtgt gggttttctc tgtatcttgt
      601 agaaatgttt ggggtgttct atcctgccat atcgctcgtg gcccgcgagc tgacaacttt
      661 agccgtattt taccttcatt tttgatgagg tggtttatat tttgtttcac tttgtgtagt
      721 gacttcccac agtagagttt tccaattgtc gttaaaataa catacatatt acacagatat
      781 tcaataaaaa tgttttattt cctgttgatg ttctagcact tctcttttga tctaaaattt
      841 tgaaaagaca ttccactcta ggggcacaat cataaacttc aaagtgtcgc aagtgtaata
      901 gcacagcact tttcaagggg ctatgaaaag ctgctttcat cagtgtggtc tgctgtaaga
      961 tggtcacagc cacctgtgct ccagtagatg aattcgccac ctctattgca gatggagaat
     1021 tattaccttg ttttcccaag agcctgatta tttgcctcca gaaaacatca ttctctatca
     1081 aaacatgggc tagtttctat accgcag
//
LOCUS       KCKM01000970            1125 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15373apa ultra-conserved element locus
            uce-1043, sequence.
ACCESSION   KCKM01000970
VERSION     KCKM01000970.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1125)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1125)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1125
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15373apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1125
                     /note="ultra-conserved element locus uce-1043"
BASE COUNT          337 a          234 c          199 g          355 t
ORIGIN      
        1 cacagagggt taacatgaaa agagggaaaa atggtaaaat atgaaacttg ttctttggct
       61 tcatctttca cattcctgta tgatactaga gcagaaacta atgaacttgc tcatcttcga
      121 aagccctttt gcatgcttct tccttcaccc ttaactctga tccttgcaga tcttccctta
      181 tgtgtgtgcc aattttactg gtgtaatatg tgcactttta ttagttgtgt tctgatgatt
      241 tctactgaga gatacttaaa gcttatacaa gtcaaaaact attttatcac ttctgaagga
      301 aactaatagg gcagagtcac tgaatgataa gagagagaga ccactgaatt tatttaataa
      361 tccatgtcca tttcacaaaa atggcctgtg taatcctttt aaaaataata acctgttcat
      421 ttcagacctt gcacaatgct tctctttgtc ccttgtaagt ctctcaaatg tcttatttta
      481 aaggaatata tagtactccc ggaagacatt ttcccatttc tattctcttc aactcctgtg
      541 agcccttgtt ctgtgtgata aggcaatctc cttcgggatc tgagctgtgt agtttcgcac
      601 cacgagtgac aaggactcga cttgaataac tgctgtgcgc aggttgtaat tatgtcagct
      661 ggagtgttga acaaggggac tgattaatgt gagccccagt ccaggcacag tccctatcaa
      721 aaccttcgtg caggccagca gtggggatgg gttaaagcag aaagacaaaa catgctgtat
      781 cgtccatgat agatgaattg ctccaacagt cttcaggcag atgttccagg acagtataat
      841 atacaattac tctgccttat caccttccca gggacaataa agcttcctcc ttctatagct
      901 catgtgagtg aaggcaaaat tagttttact tttacaacac tgactcactt atcatgttgc
      961 cttgattgtg cttttacagc taaagaaaac atatattcca ctcttaaact aaaaaagaaa
     1021 aaaaaaccct gcactcctca cctttgatat aaaaccaaac gattctttgg atttattttg
     1081 catcatagca atacagtcct taaagggcta attcagtaca ttatt
//
LOCUS       KCKM01000971             955 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15389apa ultra-conserved element locus
            uce-2704, sequence.
ACCESSION   KCKM01000971
VERSION     KCKM01000971.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 955)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 955)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..955
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15389apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>955
                     /note="ultra-conserved element locus uce-2704"
BASE COUNT          284 a          188 c          194 g          289 t
ORIGIN      
        1 tcaaaatcat tattacatgc ccattagctt ttttttaaat tgtttttact taatatgcct
       61 ggtaactact ggcctgctta tacaccagcc tgtttgtctg actcataagg caccttagct
      121 gctgtttgga caacatccat ttgataatga agcaagatgc aggctagaca gctgcttttt
      181 tctcactcat ttcactctgt tattgtttaa cttagtggaa aaatgtaaat tttccaggaa
      241 ctttaggttg gaggtatccc agccgaggta gatatgtgct caacttgagg tctaatttaa
      301 ctcctgtgta gtattgattg gcttggctca ccagggacct ttagagtctt cctttgccaa
      361 aggtaggcaa tggtatgaaa gtaaagtgta ataaatgccc ctgtccagtc ccatgtcgat
      421 atgcagctgc cttttttcct actccttttt tgccgttttg agtgcatcag tatttcacgt
      481 ttattgtagt gtgatgaaac acctttcaaa atggccagag ggacactcag cagtaagcat
      541 ttaggcagta caaattggag tgaacaggag gacagttagc agggaatttt tctgaggtca
      601 aagcaagctg aataggagct gaatcagcta aaagcgagtc gagagctaca gtacctactg
      661 caaagtaaat atagattaca ttcctttaga caaattgatc cactggagga caataggtct
      721 tccagaaaaa taagttgcta caaaaggatt aagtatttta cactgacata catacaaaga
      781 acccttaaac acagcagcca gagacttaag tccatgcttg gtcctcacat gaataatttg
      841 cagtgcactg caagttttaa gggtctacaa gttcgcacat tcctgtggag gatgactaat
      901 attctgccca gtaagcaaag cattaaaatt tagcggctca actgaacaat agttc
//
LOCUS       KCKM01000972             944 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15405apa ultra-conserved element locus
            uce-7048, sequence.
ACCESSION   KCKM01000972
VERSION     KCKM01000972.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 944)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 944)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..944
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15405apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>944
                     /note="ultra-conserved element locus uce-7048"
BASE COUNT          241 a          238 c          186 g          279 t
ORIGIN      
        1 caagatgttt tatgatcttt gtgacagcac tgcagaaacc cacctgtctc accagcaagc
       61 accagattag taagctttgc atcaaggggc tcagtctaaa ggttttcttg aaggggaaag
      121 tgctggacta aatgttttta aaagctcagc tcacatgtgc acacacctcc ctcagcaaaa
      181 tataatctga gccttttctc ttaacacttc ttattttcta agataattga atgactcagt
      241 gagcatggct ggcattaaag tcttgggggt gggaaaagca gaggtagcaa gctctaaatc
      301 ctctgccaaa tccccttttc ataatttata gtctgtcacc agtttatcac tgagaactgt
      361 ccctcttttt ctcattctcc aggctccttt cccagtggac agtccatgcc agctgtctcg
      421 gcagcaggaa cgtccttttt ttcccaagcc tcgacctgtg ggaaaatctt cattggccag
      481 taattgattc caccctgcca gctccattac tttagtctac agtcaaactg ccagcaagct
      541 ggagacaggc agcctcagcc ctcccctgct cccgctattg aagtccgctc ctacccgggc
      601 cgttcgctac cggggctccg agctgaagtg tcagcctgcc ctgcaattag cactaatctg
      661 aaaattggcc tttgctagca aagccaagca cctgacagct aattgttaat gtcagactga
      721 tgtgcattta atatggaaag gttatttatc aaagggtatt tttttttcct gttggtcttg
      781 gtttgtctct ggattgccac aggcgcttac agcccacaaa ccaataaaga tcttatactt
      841 catttaactt aaggagcctt ctaaataccc ttttgaaacc cttggtgtag ggcagtgcag
      901 tactcatcta tttatattgt ttataaagaa actgctgcta acca
//
LOCUS       KCKM01000973             677 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15420apa ultra-conserved element locus
            uce-5093, sequence.
ACCESSION   KCKM01000973
VERSION     KCKM01000973.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 677)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 677)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..677
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15420apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>677
                     /note="ultra-conserved element locus uce-5093"
BASE COUNT          233 a           99 c          116 g          229 t
ORIGIN      
        1 ttattatttt ttttaactga gtagaaaata tgtagaagaa aatgcaacta tatatacttc
       61 tgacagctca aatgatacat aaatataagg gctgacaagg gttggtttgt cattgtagtt
      121 cacttcgatc aactctacat ggttctgtag gacaatgaaa ttcaatgcac ttataatttc
      181 caaaaaagtg agctcagatt cttttaaaag catttctatg tgaaaacgga tcatttacat
      241 gccaaaagca cttttaatgt gacatattta gcacatgtat tattgagaac gaaagcggct
      301 tgaacttagt gaattttaaa gtctataaaa tggcaccctg ctgagcagaa aggtagctgt
      361 tcagtgaatt tcccagttat gtgattattt tgaataatag acttgtacat aactttttac
      421 gaaattaaag gtatgacatt tgctttagtt cagtcctgta aattgcactt tagaacacaa
      481 agaatggtct gatgtatgaa tttgttgttc ctccaagcaa ttttgctgat tttttaaaga
      541 acagttttat gtttcatcta ttgagtaaca catcaaacag ttatcttagt agatttaatg
      601 agcattcatg tataacttaa cacatatgag gaacagtcag gaacctcaaa aaaaaaagta
      661 tcgcgtatta cctgagt
//
LOCUS       KCKM01000974            1072 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15435apa ultra-conserved element locus
            uce-7946, sequence.
ACCESSION   KCKM01000974
VERSION     KCKM01000974.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1072)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1072)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1072
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15435apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1072
                     /note="ultra-conserved element locus uce-7946"
BASE COUNT          332 a          261 c          201 g          278 t
ORIGIN      
        1 cctttcaaag gagcgttcac agctacaatt tagcatcgag tttctgggct aatgaaagtg
       61 catctaggct agtaaaacag accaaaacaa atccttgaat tccagtcctg ttgtgtaatg
      121 aggaagttta attaaggcca cacattacag ctgtaaacgt tctcttatat aataaggtct
      181 aaatgaaact gaacctaatc aaagttacaa ttccttcatt agcaaattac aaacaagagc
      241 gcacagctga cacaccggct atgattatca caactaattg cctcgttgtt acaaaccagc
      301 ctgaaactgt gttcagatgt ccgtctgcag tagcaaatta gggccacatc aggctatttc
      361 agcgatcaca aggggctctt gtagagcgat ctgatttacc ctgccgactg gcagcacacg
      421 gcccaatcaa agccccctct acaaaggcag ctttgaagcc agcacagcct agaaacccgc
      481 tccatatgca ggccggcaga ctgcacttca ttaggcctgt tgtcacattt tccctcttct
      541 tattctaatg atcctatttt aatacacata ggaacctctc ctaattgatg tcaagtgagt
      601 gacttccaca ttcatcaccg gagcacatca aacgggtctt ggcgcacggg ccgccatcag
      661 agtgcttaag acccgaggtg tgtctccaac tatggcaagg aaaaaaaaga aaagaaaatt
      721 cggcattacc tgtttaattg ggattgcgcg accgcttcca atgctatccg ttctgctctc
      781 caggaccttc ttctctttgt ctgggtcact ccctttccga gactgcagag caaaaagaaa
      841 gtttgcgctc cattaaatgt agccttgcac acagaggatt ctaaagcaat taaaaaaaaa
      901 agtctatgta gactcaaagg atgcatgtca caacgtacaa aagtacacaa ccattccaaa
      961 atctgaatgt taaaatacca cctctaattt tcaaccatcc acttgttcga aatggcattt
     1021 ggatttaaag acttatagtt ttactgcctg aagatacagc agaggacaca tt
//
LOCUS       KCKM01000975             764 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15451apa ultra-conserved element locus
            uce-80, sequence.
ACCESSION   KCKM01000975
VERSION     KCKM01000975.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 764)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 764)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..764
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15451apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>764
                     /note="ultra-conserved element locus uce-80"
BASE COUNT          250 a          112 c          139 g          263 t
ORIGIN      
        1 cactatggca tataatttgt attgcttaga gataaaatac taagattgat tactaaacaa
       61 aacaagggat gcattacgga tttgtctaga gaggatataa aaagtctctt ctgtatttca
      121 gtgtttttag ccttcacaga agtggtactt tactaatatt tggggaggga agaggaagat
      181 agttgttcca aaataagaaa tttacgctgc aaaccattct agcaacttga acagaataag
      241 tcagttgttc cgggataaaa atgtttctca atttttaatc tctagctgaa gctcatttga
      301 caaacctatt atagaatgaa taagtgtagc tctgtgtgat ttgtccattg tcaacatgtt
      361 aacacacttt atttgaaggt agattgatga agggtggctg aaggagttta ccctcctgag
      421 ttaaagaata gaaaaccctt ttttcttagc atttttcttt ttttcttaga agttcacaag
      481 agtagatata caattatcct cgacttgctg atgcaaagga acagagcatt tagtttcttg
      541 tcactgtctc tgaaattcct aaaggtacaa ttagcatttc atttgacata atgttgaaag
      601 gttcatagat tgatcttccc taaaatgcag caagaatttt ttgaaatgca aattttgaca
      661 tttattaact tttattccag atctgtttat agactgtaaa actgtgcata catttaactc
      721 aaagaagcta aaaggacaat gtttaggtgg atactctgtg ttat
//
LOCUS       KCKM01000976             838 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15465apa ultra-conserved element locus
            uce-5224, sequence.
ACCESSION   KCKM01000976
VERSION     KCKM01000976.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 838)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 838)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..838
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15465apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>838
                     /note="ultra-conserved element locus uce-5224"
BASE COUNT          263 a          167 c          159 g          249 t
ORIGIN      
        1 gggaaaataa cctttcctcc atgttctgtg atctcatgca aatgggaatc tgagcgagag
       61 agggaggaag gggccttggt tttttatttg atttgatttt tcatttcgtt caatgtaact
      121 ttaagaaata ttaatctgct ccttccttta atttcatctg taccattggc caagagaaat
      181 gcactaattt ataagttgaa gcaagccttg agataatgtc acccaccatt catccaaatt
      241 tgtcactagc atcccattaa agccgtaatt attttttaat taaaactaag gaagctggca
      301 tgcgtgtgcc tactttatac atctgttatg ggttaaaata gcttttaaaa aatgtttttt
      361 tagaccgcag tcttttgtgg ccatggccta tgccaaagaa aacgcaaact tgcttatttt
      421 ctccatgggg cgcaacactg cctatgtgtg cctgaacaga ttcgactggc cgtgaaaaga
      481 attctaaata aaacacaaac atggaatttg gcaacgccac agaagcgagc ttaagactaa
      541 ttccagcatg cggacggctc tcacacagca agtctggctg cactataaat gaaaccaggc
      601 tctgtaaaat cgccagtaaa gtttgagtta ggatttaaag agacagcact cctattccaa
      661 ggtttaaggg aaaaaaaaag catgcgcgtg cacacacaca taccccagct tattaaggaa
      721 attcatgctg gcccaataag cctgtacatt gcaagctgtg tttactttca gcagtcattt
      781 ccatttaaaa aaaataagag aaaattcact ttggacttga tttctagctg taattatt
//
LOCUS       KCKM01000977             583 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15480apa ultra-conserved element locus
            uce-6152, sequence.
ACCESSION   KCKM01000977
VERSION     KCKM01000977.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 583)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 583)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..583
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15480apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>583
                     /note="ultra-conserved element locus uce-6152"
BASE COUNT          198 a          107 c           96 g          182 t
ORIGIN      
        1 aatgggttaa atgcttatta taccactgtc ttatttgtaa cataaggcac ctactacaag
       61 cctactcttc atgcaaaatt gccaatttat agcaatattc cttgtttaga aaacaaggct
      121 atccaaacac tataattaca atatgcacca gcaggcataa ccctgcatta atgcacagac
      181 tccagataca ttcgtcaaat agagtttttt ttctctttgc cttcttctca gggtactttt
      241 aagttcaggg acagagaaca tgtcttcatt agaaacatta acattcacag gctgtagtaa
      301 attttgacag tgaaaaggtc tctgtaacct ttagttgtgc agaaatttac ttcccaagaa
      361 aattacagct ggcactgtct taattaatgc tagctttctt ttctgaaaat tgtgggcttg
      421 tcagtaaaaa aggcagaaaa acctgagttt aaaagactgg acacaaaaga cgcctagaaa
      481 taaagccctg caaaatttca taatattgct gtgtttttgt tctacagtaa ggagatgaaa
      541 agatataatt cgattttgcc aaatggagca acatatatgt aat
//
LOCUS       KCKM01000978             970 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15495apa ultra-conserved element locus
            uce-5100, sequence.
ACCESSION   KCKM01000978
VERSION     KCKM01000978.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 970)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 970)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..970
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15495apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>970
                     /note="ultra-conserved element locus uce-5100"
BASE COUNT          271 a          219 c          220 g          260 t
ORIGIN      
        1 agctgcacat cccacagaaa catctaaagc ccgagaccgc tgcagtcaga cctccctcga
       61 ctcctgctct ctctcgctgc cacctctcct cagtccccac gctgaccccc tgaatcaagc
      121 cagatgggac tggcggagac atgtcaagga agtgctgaaa aggtgacttg ggtctctggc
      181 agctagtctg gagctcgttt ctctgagaaa tctctggggg ctgctgcttt gcaatttctc
      241 aggaatgttt aattctcctc atccctttgc tgagtctctc tggagaggtc acggaggcct
      301 gtgacatccc tggagggcac tgcctaacta aattagcatg agataacttt ggactctctt
      361 ccaaacaaga aaatacaagg gagagaattt cattaaaagc agaagactag gtgatccaag
      421 ttaatcccag cccagagctg ctgcagaaat gttctctgtt tatattttga ctttactctc
      481 tgttacagag ttcactgact ataatggaag ctgtgttaag tgcacaactt gacctcagtt
      541 gaccaaatct tagtttcata ataaagacaa aaagtgggtt tggcggctct aaaaggtttg
      601 attagttgct gttttgcctg tttgtgtgtg actatgtagg gcgccgagta aacggtaaga
      661 gataacactg ctgtacttca ttcgttctgt gagcttttta gtgaggaaac gtgaactttt
      721 taacacgcaa cagtattaca aatcatagtg tataggttta gcatttgtta gcaaagcaaa
      781 tatgaccaag ttccaaactt gcacccaaaa ttttgtttat ggtccctcag tggatgaaag
      841 aaaactacct caggagataa agaggcaact tagagagagg gaatgccaac atctgcacac
      901 acttctgcag tagagtgttt cccaagcaat tcaagggcag ggtaggacac aagggtagct
      961 caacacatcc
//
LOCUS       KCKM01000979             471 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15510apa ultra-conserved element locus
            uce-4172, sequence.
ACCESSION   KCKM01000979
VERSION     KCKM01000979.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 471)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 471)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15510apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>471
                     /note="ultra-conserved element locus uce-4172"
BASE COUNT          139 a           83 c          118 g          131 t
ORIGIN      
        1 ggagatgtgg ggaataatct aatgcaaagg tagaaagaaa actgagctta tttacccagt
       61 aacacgtgtg ttagagtaat gcctcccttc ctcggctata cgctccccca ttttctctct
      121 cacacacgta tatacacaca cactttaact gtgcttttgt gttttgtcag aattaatgag
      181 aaaagttccc ttgccctagg ggtaattagt gtccttggag ttaaataagc taatacttag
      241 acacctctgg cacaggcaat tatgtttgtg tattgaataa ttgattcaaa gaggggggga
      301 aggggctgct aatcagatct gagcataatg aattgattta attaacaggg gaatctgagg
      361 gtccctggga aatgtgtgca tttattcagc agcaggagag agtgcaaagc acataaattg
      421 agagagcgag cgagagaggc aggcggcaag tgcttttgct ttcagtgata g
//
LOCUS       KCKM01000980             355 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15525apa ultra-conserved element locus
            uce-4394, sequence.
ACCESSION   KCKM01000980
VERSION     KCKM01000980.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 355)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 355)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15525apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>355
                     /note="ultra-conserved element locus uce-4394"
BASE COUNT          131 a           47 c           73 g          104 t
ORIGIN      
        1 ggtaatactg tatctttaat gtttgaatca tttgttgcaa aatatagtca aaataataat
       61 ttgaaaggga aatttgataa tgtcagatag taaatgcata ttttacttat tttaatgttt
      121 gttgatttga ggctttgatg gcaacgtggt aaatattcgg tttggctggc acaaactgtg
      181 caggaatcta atagaaagca atattgttga aaatggatat caattgaaaa cagagagcag
      241 tgtcaactat tccccactgg gagcacacaa caataaaacc agtcaagcat tacacagttg
      301 agcctgccaa atgtcattag agtgtagaaa aaagtaaagg cacatacgaa gagag
//
LOCUS       KCKM01000981             840 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15540apa ultra-conserved element locus
            uce-7500, sequence.
ACCESSION   KCKM01000981
VERSION     KCKM01000981.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 840)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 840)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..840
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15540apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>840
                     /note="ultra-conserved element locus uce-7500"
BASE COUNT          271 a          152 c          123 g          294 t
ORIGIN      
        1 aaaattattt taaatgtatg agttaaatcc ttttaccaat atagtgacat tcagctaccc
       61 agtgccattt ttacagtcca aatagatatg gtcctaattg cataatgcca ttttatctgc
      121 tgaagataaa agtgccgata aacaaaaatg cacattaggc aggagatttt tcagaataga
      181 ttttttttta aataacccac ttgcattaac aaaagattgc aatggcttcc aaattatagg
      241 gtgttatttt tagtggaagt agttcaatat tcatattgga gcagatgtag cagtttaaca
      301 aaacagctct tcaaatcctg cacaaattga aaacaggaaa actgattgca ttttctctta
      361 tcactttcct tttctgaatt gacacttttg gccttctgaa aatttacaca tggctttcat
      421 ctcaacagca cctgctgatc aaacagaaac ctaacatttt catgaaaatg gtataaagga
      481 ctagttttct ttttaccatc ttaaagggca tcagcagtcc acttgatggc aacaattgcc
      541 gagtagatgg cacactcaga atacatttta tatttttcat tatgcttact ttttaaaatg
      601 agttaagtca ctagtggctc tttcatatta gctctttgtc tgctttaaat taatttcagt
      661 ctctatctct gcctaaccct gacgggtttc attctacagt cagctagatt ttaaagatct
      721 gaaagccttt gaaataatca gacacattgt atgttctgca gtcactgagt cttctttata
      781 aatgcattta tatgcaatca tattaactaa tatatataat tatgcaatgc acatattgca
//
LOCUS       KCKM01000982             467 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15556apa ultra-conserved element locus
            uce-7021, sequence.
ACCESSION   KCKM01000982
VERSION     KCKM01000982.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 467)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 467)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15556apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>467
                     /note="ultra-conserved element locus uce-7021"
BASE COUNT          161 a           84 c           96 g          126 t
ORIGIN      
        1 gcataagcct gtgaaagttg agtacctgat taacagaggg tagctgtatt cagacagaaa
       61 gtcgtgggca aactcagaga cagaatctgg tctccattcc tcaatagagc ggttacaaat
      121 gaagaggaaa atattacctg aaaaccatat ttgagcaata tggaaggagt tagactcctt
      181 ttcaaatatg tttttccaac taatactctt gtgtggctta aaattatcct gacagaaaaa
      241 caattgaggc agcttttaaa ctaatgatac aatcccatgg ataatttccc ctaaatagct
      301 cagagatgtg actgaatgaa tcatacatca tcacgggaag caattttcct caatgagttc
      361 tacctgctgg atatcacaat gcattagaga ttgagtaaaa ggctttgtct gaaatcaaat
      421 tgaaactggc tttggagcaa aactgaaacc ctgagggtga gagacct
//
LOCUS       KCKM01000983            1154 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15571apa ultra-conserved element locus
            uce-717, sequence.
ACCESSION   KCKM01000983
VERSION     KCKM01000983.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1154)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1154)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1154
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15571apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1154
                     /note="ultra-conserved element locus uce-717"
BASE COUNT          348 a          234 c          216 g          356 t
ORIGIN      
        1 atttttattc ttggtattca ctggaacata gtaacaaaga ggacacaata ggcaagtgcg
       61 aggtgtcagc ctttaaattc acatggcttt gtccttaaac agcaaagatt ttttttttta
      121 tcactactga cacctcaata tatagcaaag gatgccctga aatggtcatt gctatgtcaa
      181 atgaatgagc gtctgtacac cacattgtca aaaggaatta tgcacaaaac cagggctatt
      241 gaaagctgaa cttccccaca gtcgtgagat tttatgcagc tgagaaactg gtagcaatag
      301 gaaataactc catgcagtgt tttacatgga catgtttgaa ttacacatac aacaagagcc
      361 ttccattgtt cacctcgcta gtgtgagtat ataattttcc tgctgtctct ttcccccttt
      421 tgttcttttc agctattttg tgattaacac tgtctgggaa agaatttcag tattttctct
      481 ggtttagcag gatgtgagtg aggtggtgct gctgcatgaa tcttttaaaa gcagcctaag
      541 aaatatttaa gaccttagtc taggaggaac agctctccca ggcataattt ttggtgctgg
      601 ttgcagcagg gagcgtatgc tgtgaggaaa gtattatttt tctaaatgga aggtgtcaga
      661 tggtcacgca atgtgactgc atgttcgaga tcactgcctc ccatctgcaa tttgtgacgt
      721 gtgaaagatt ctgcccaaat gtgctcacca actggaaact ctcggcactt tttttttctt
      781 atcaggagag accaagataa ccaatggttt tacagatcag ggatcctatc aaattaatat
      841 cattctagga taaaatctgc tttaaataca accactaaac tccagcaaag ttaactagta
      901 catacaagct cattcaactg attaaaaatc cctactagta aaacaagaaa atacacatgg
      961 aaagaaaagt attctgctcc tgtcttttaa ccaaaagctt agtataaaac atgacagtct
     1021 ttcccagcac taattaatgc cacctaatta taacactcac taggctcatg ccaggcatta
     1081 atatactagg ggtagcttct cctggtccag cttccttctg gatcaaacaa tttgtttgct
     1141 ttttgcagct ctct
//
LOCUS       KCKM01000984             976 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15586apa ultra-conserved element locus
            uce-1359, sequence.
ACCESSION   KCKM01000984
VERSION     KCKM01000984.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 976)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 976)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..976
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15586apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>976
                     /note="ultra-conserved element locus uce-1359"
BASE COUNT          259 a          201 c          215 g          301 t
ORIGIN      
        1 ggtgggtaca catttcaaaa gaatgcaatg ccttcgggtt gagtagacgg ggaaggccgt
       61 acttctgcat attggcaggt gacacggcag agatgtaggg gaggatgagc cggtgagcgt
      121 tggtctgttt tgcagaacgt ctcctgcctt ggattcccac ctgaaagacc tcacgagcag
      181 atctacctgg gaccttgtgt gagttctctt ctggcgctct tgatggcagc tgcctcgtgg
      241 atagaccatg ccttagataa tgtcgagcaa cctggtttct gcctaatgta cttgtagtgg
      301 gggtggcatt aaacattatt cagaatccat tatgtattta tctttatact cctttgtgga
      361 aaatgatttc tgtaagtacc ctgttatggt tatgaaagcc cgaaccaagc atcagtctca
      421 aaccctttga cctgtctgca cagaatggaa atctgttttg aaaaggactc ctttatatct
      481 gtttttactc catgcccttc cattcatttg cctatacaaa gcaataaagg gtaaaactaa
      541 agtaacataa attggtctgt cttcctgaat ccatgtctcg ctaatgtacc cagattaact
      601 caactgtaaa ttgtctcctt tggatgtcgt gtcttgctaa aagtttccta tatgattcat
      661 gatttggatt gcttttaaca gctattggct aagcaatatg gtaaatgtac aaggtgatgc
      721 aattggcatt agtgagagga tgcacaggag catgtaatgc agtcaatact acattaacta
      781 ctgatgccca attacagaaa ctggaagagt ggcttttagg agcattagga cttgcagaag
      841 agctgagatc acctgccgct ccttgcctaa aagcttcacc ctttatgcgc tgggatcaaa
      901 gcaaacattt agttgctatt ttgtcatgta taacaacgaa ggtattttcc cccctgcttt
      961 ttttttttcc caaaaa
//
LOCUS       KCKM01000985            1149 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15602apa ultra-conserved element locus
            uce-6432, sequence.
ACCESSION   KCKM01000985
VERSION     KCKM01000985.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1149)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1149)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1149
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15602apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1149
                     /note="ultra-conserved element locus uce-6432"
BASE COUNT          388 a          258 c          198 g          305 t
ORIGIN      
        1 aacttcaaag gttctgagca acaatctttt ccaaatgttc ccttcctatt actgcgtgta
       61 agaccctaac taacaaaaca cagctcatta cttgggatgg gggagaggaa tgcacaataa
      121 aactgagcat gcaaaggtct acaaacatag atagtgaaga ttcttcctgc ataaacactc
      181 attttacttc atgctgctag cctatcaggg tttaaattga tagtgtccct ctaaaaaacc
      241 tgcttttcac aatcagggaa caaaaaaaga caacacagcc aaaaccaagt tattcttcac
      301 acatatatga agaacgctcc atatcctagg tactgaaagt tcacttcggt atctgttatt
      361 ttaaccaagt caataaaggg gtttttatta taccctacct ataaaactgc tgtaattaca
      421 cgttccctta cacacactgc atacaattta tatatgtgta tacacatata ctcaaatatg
      481 gaacaaacag attgcagcct caatcctatc aaaacttacc caagggtgtt gcctgccagt
      541 ctgcccagag tttcagaacc agacagaaac catggggagt cactagtcct gcctggcctg
      601 gatgtccttc ctgcccctga gccactgctc aactttgaac tgaaagtaaa agatggtaaa
      661 tcagtcacaa aacaatccca aatgggttaa gaacaaaacc tggaatccca ggtctaaatt
      721 ctcagggact tagtctggta acataccagc ttaagcaaca cccttgggga atattccaaa
      781 ctaatctaac tgtatattaa gaggtacact gcagaaagaa agtggaaagc atgcctacca
      841 gatcttatgt atattcgcaa tccataacag cacagttgca catacatatg aagtctctta
      901 gcaatttgaa ttagccactg tgctaagttt tcagtcagcg tatatgtaca aattgtaatc
      961 accaggcgtt ctacccataa acctgagcct gagcacttca atattaagaa gtggtttaca
     1021 ttcgaataaa aaccattaaa tagccctatt aagagggact tacctggact gaaggtgaca
     1081 gatctacagt ctctggatcg gaccactttc agagtggatt ctacatgaag cttaacaatt
     1141 taagacagt
//
LOCUS       KCKM01000986             959 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15617apa ultra-conserved element locus
            uce-1206, sequence.
ACCESSION   KCKM01000986
VERSION     KCKM01000986.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 959)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 959)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..959
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15617apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>959
                     /note="ultra-conserved element locus uce-1206"
BASE COUNT          333 a          173 c          194 g          259 t
ORIGIN      
        1 cagcaaatta aaatattcat taaatacatc ttatatccca aaaaatgtaa ttttagagta
       61 gtaataagct aattcagatc aagttgcctt gctgcttcgt gcataacaat gcaacgtgta
      121 taaaaagatt agttttacct tgacatactc tcctgaattt aggagggaat tttctaaaca
      181 aactgttaca ttcctaggac aaagaagctt aacacttgca gcatgataac agctgaagca
      241 tgccaacatg agaataaaag ctgtgttaac attcatgttg tctgaaactt aacacagtaa
      301 aacttttagc aatcggtgat aaaatgaaaa ccaaaataga ctgaaacaag tggaaaattc
      361 atcaaggtct gatgatgcaa tgtttccagc caatataagt atactttaac aacttgttct
      421 ttactgtaat ccaattgtta acatactgaa acaattttgg ggcagctcat aagattgatc
      481 gtattcatta gtattttttc tgacagatac tcaggacgtt acatttactt ctcagctgga
      541 aactatatgc aagtctgcca gatatggcaa actgtgagtg tttggggagg gggaggctat
      601 aaagctgtta aattgcctac ggttctgata cagcacagaa catctggtct ggagagcttg
      661 aggaaacacc attaaatagg cagaaaagaa aaaaatcttt gtgctaagaa acagtccagg
      721 ttttgtatgc ttctgtcaga ggtatacttg gcaattcgtg cgatgattgg tcagtcacgt
      781 acagagccag acacgctagc aagcggcgtt tgttagacat ctggtcgagt tccaccagcc
      841 ccttcgacga gggaggggag atgaaggaat aaaaatgaag cagctactcc agcattccaa
      901 aacgtacaca tcagggctct gatagcaaga aaaataaaca gaaagaagga aaccctgtc
//
LOCUS       KCKM01000987             733 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15632apa ultra-conserved element locus
            uce-5331, sequence.
ACCESSION   KCKM01000987
VERSION     KCKM01000987.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 733)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 733)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..733
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15632apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>733
                     /note="ultra-conserved element locus uce-5331"
BASE COUNT          236 a          159 c          179 g          159 t
ORIGIN      
        1 aatacaaaac acagtaaaat actgcaagat gagcaagaga aattgcaaga tgctaaagaa
       61 gcattcccct acaagtgtaa gggtgggggg agaaacacac acacagaaaa ataccgtaca
      121 cattaaggaa cagttgaaca actcacagca ggtttgcgaa cagcagcaca aggacataaa
      181 cagctcagga tgggaaagga gcgagaggga aaaaaaccgc ctcagctagc aatcacagcg
      241 ctgaatcccg gaaggggctc ggggaagtgg tcacaggtga ttgtcatgtg tgataattat
      301 tattactgta cacctgctcc tccgcactaa ttaactttgg atatgcaaat caatcctatt
      361 gcatcatgcc cctgctctcc tcccctacag ataagaagat gttcagctgc tggatttaat
      421 taggataatg aacggcaggc ccactgtggc ttggcagggg aggagggagg ggagaagctg
      481 tgactgacct tttctcccaa aacgttgaca ttttctatag cttctgagca ctccaagtca
      541 cctccatggc tgggacgttg ataggagcgg attgatgagg tgtcattaga ggagaaacac
      601 catggcccca gtgtttgctg ggagaataca gcaggtgttc tgacaaggac acaagccatc
      661 actgttattt gccaaacaat tctcttgatt cactaaagtc aagcacgcca gcatttcttt
      721 agaaaagaaa aca
//
LOCUS       KCKM01000988            1019 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15648apa ultra-conserved element locus
            uce-3656, sequence.
ACCESSION   KCKM01000988
VERSION     KCKM01000988.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1019)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1019)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1019
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15648apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1019
                     /note="ultra-conserved element locus uce-3656"
BASE COUNT          333 a          162 c          181 g          343 t
ORIGIN      
        1 tgtgaatgcc caaataccag aagtttcata gaattaggtt ggatataact ttttaagtct
       61 tgacaattgt acctgtatgc atagatatac gtgtatgttt atgtgtgtac atgtatctat
      121 aaagtaaatt tctcattatt agttggggtg caagctatta aatattcagt tccaatgctt
      181 aagatagaag tcttccatta aaaatctcat ttttttcttt attccatggt gttatggcaa
      241 atttagagaa ttaaacagtt ggtagaggtc tgcaaatggt aatatgtact caaatattat
      301 tttagaccaa aaaaaaatct gttctaagaa ggcgaatgtc tttgttttat aggtctctgg
      361 ccatctgaag aagtgctagc ttactactgc ctaaagcaca atgaaatatt caggtacaga
      421 cttaaacata aaaagatatt ttccaatctg ttttattgta tctgcatggt aaagattgct
      481 atgatttaag tcttcagatt aaatttaaaa tgttcaaggt gaaagcatgt tgctcttaac
      541 aaagagttct gagctgcctt tgggtactaa tattgcacag caagctttct gctatatgtc
      601 aaagactttt gatttccact caaggcgttt tatttcactt tgatttttgg gaaacaaaag
      661 tgaagctcca atcgatcagt actgattgtg aaggtcagga aaaataatag acattcttta
      721 aactaacatc tgttgcaaaa gcaagcaaaa tatttcctca taaataatat aataatcact
      781 gcatgtagca aaggaggaat ttgcacctgt atttaagtat tgtgaaacaa tttggagaca
      841 ttctgctttt ctgttttcac attttctgaa cttgcagaag acagttacca aggctgcaat
      901 aggaacactt aaaaataaaa cctgtcctgc atcctctctc tttccccttg agcagacaga
      961 gctttgcact tgaagtttca ttctccagag gatgaagagg gtgcaagaaa agccattat
//
LOCUS       KCKM01000989             920 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15664apa ultra-conserved element locus
            uce-234, sequence.
ACCESSION   KCKM01000989
VERSION     KCKM01000989.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 920)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 920)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..920
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15664apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>920
                     /note="ultra-conserved element locus uce-234"
BASE COUNT          334 a          139 c          148 g          299 t
ORIGIN      
        1 agtcagatta cctttaatgc actatttttg ccttaaaaac catattttga gtccattacc
       61 aaatattatc tacagtaata tactaaatac atactttttc aaaaaattat caatcacttt
      121 tatcctaaca tcaataaatc taagaattct ctggacattt ttgtttaacc cctgtctgtg
      181 ataacataaa gtggcaagga aaagcatggt ctagttctta gtgcggtgta gaaagtaaaa
      241 gagatctctt ctgcagcaaa ttctggaact tcttaattat acacagactt attatctgca
      301 tccccagtgt tataaagtac cagaacttca ttagaaaaat taagatggaa aaatgaaggc
      361 actactttgt atatttccag tggaaattag ctggaagaag cagaggaata ctggatcaaa
      421 agagggtaat catgcttaac tgtgccctag agcacccgca tgtataatac gatttgcaca
      481 gtaactacct ctcctattac tgcttgtttg gagtattctg tgttaatggg gttagctaat
      541 ttagtatttt aacttaaaaa gactctgctg attaataaat gttgcacact gtgctagtaa
      601 ttaaaataaa tggaagagtt acaaatagaa gttgaattgt taagaaaaca ttatctgaaa
      661 atatatgata atccctgttt atcataatac aataacagtc cagaaaatat gcaaattgct
      721 gaagttgcaa agcatatgaa aaagtaagta taatttgaaa aaagttttca gatgtgtcat
      781 atttgcatga cataaaatgt agcagtcctt ttcactgcag ctaagtcgga aatcaagtaa
      841 aatcttataa atgtagaagt gaaaagattt ttttaaatct taagtctaat caaagtgact
      901 tgctttttaa atattgctgc
//
LOCUS       KCKM01000990             874 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15680apa ultra-conserved element locus
            uce-861, sequence.
ACCESSION   KCKM01000990
VERSION     KCKM01000990.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 874)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 874)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..874
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15680apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>874
                     /note="ultra-conserved element locus uce-861"
BASE COUNT          272 a          184 c          174 g          244 t
ORIGIN      
        1 tcataattgt cacaatcgct gttaacaggg actttgtttt acctttattt ttgataaagc
       61 acttttgcat gggaatgccc tacaagaccc tcaacagtag gtttgcccag agtgttctaa
      121 ttaactgtac caaacggtct actacgctgt caagttaata cctcctatct ggctgttcac
      181 tggccatcat gtatcatcgt tcagcgaatg acagcagtca ggttattaaa ggtgtagata
      241 ttaaattaac aacagtggta aacattgtag ctgtacttca catctcagca gagccaatga
      301 agtggatgac accgaatccg tgctcatccg ctgcaatgac agatgggcgt catttaacac
      361 aatacatcag tgggcaaccc acgtaccaca gctgtcctcc actaaatgaa ttagatcagg
      421 gtaattaatc taaggcagaa agtattacta aagtgggttc ctaagtggaa ttagaaacga
      481 acaaaatatt ctgttaaaaa agagaaataa gggctcagtg cagcgtaaat gattgccaag
      541 tgttctaatt ccacaccaaa agacaatgcc catctccttg tgaagggagt acgtaacaaa
      601 cactcccgtg ttccccagga ttttatcaca atctcttttg tcaccacgtg caacaaggga
      661 gaaacaacaa cagcaaggga tcatgaccaa ggggatacaa acgacacgac actctaatgc
      721 aagaaaatct tatcaccttt attactaata cgtactgctc aaggaattat ttcttattac
      781 agatcctctg ctcatatgga ttgagaggat ggatttctat ggaattttgt ctgagggatt
      841 tcttgtttct gtttttggcc agggcagtag ctgt
//
LOCUS       KCKM01000991             497 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15695apa ultra-conserved element locus
            uce-7046, sequence.
ACCESSION   KCKM01000991
VERSION     KCKM01000991.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 497)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 497)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15695apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>497
                     /note="ultra-conserved element locus uce-7046"
BASE COUNT          161 a           80 c           80 g          176 t
ORIGIN      
        1 tcaagtagga acatctttta taaaatagag cagacatttt tctttcaagc atgtattttc
       61 agtatactgt tttgattcaa aacttatacc atttattgct aagaatctta gcagtgatga
      121 ggataagcaa tgtagcataa cacattgatt ttatgcagat catcaccttt atgttttggg
      181 aggtctgctg tattagtgat atataaaaac tgattacttt ctccaacatt gcctagtaat
      241 tgtttattat tttcctatta gacaaacaag acagatcaat attcctgaac accaaccaga
      301 ctatgagtaa catcactgta aatagatttg cctcagacct cagtggtgta ttcattttaa
      361 tgatttggac aatgtgagtc caatgacaaa gctcaagcta ggtttaaaat taaattaaga
      421 ataggaattg cttactttgt tcctttgcta attgataggg ccttgcctct ttgacactag
      481 ttcttagaaa atagtat
//
LOCUS       KCKM01000992             637 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15710apa ultra-conserved element locus
            uce-4525, sequence.
ACCESSION   KCKM01000992
VERSION     KCKM01000992.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 637)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 637)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..637
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15710apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>637
                     /note="ultra-conserved element locus uce-4525"
BASE COUNT          196 a          127 c          117 g          197 t
ORIGIN      
        1 cagtgataaa cttttttttt ttccaagaat attttgagag gcctgtaacc tttggctgac
       61 acccaacgag gctattagtt taaccatggg atgcactacc aaatgtacaa cagtcagcag
      121 aacttttcct tctgaaaact gcttgtaacc ctctgtgaag aagccttcaa aaatccagaa
      181 aggatagacg gaagggaaaa attaggcaaa aaggggctga cttattggct tctgataatt
      241 ggcacaactt cagcttccag tttcttttca acaatatccg ctcactatag caaccccgga
      301 tcccatttaa atgtcatgct gccctctgtt ctataaacat gtatcatcca tcactaaata
      361 tttagatctg aattgttgga gctgagttct gtgccagggg taaggggatt aattcctttc
      421 aaggccctca catgatggat ttttcactga agtaaacatc cgagaagagc tcacactacg
      481 gccataaaat atataaataa agtttaaagt ttaattaagt caacattatt taaagtggtt
      541 gtcatatttt atggtgaact ctttgtgttt attttgtatg actcctcata aatagtctct
      601 ccccttcaga caaaaggcac ggctgggtta aagttaa
//
LOCUS       KCKM01000993             403 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15726apa ultra-conserved element locus
            uce-1488, sequence.
ACCESSION   KCKM01000993
VERSION     KCKM01000993.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 403)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 403)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15726apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>403
                     /note="ultra-conserved element locus uce-1488"
BASE COUNT          140 a           82 c           77 g          104 t
ORIGIN      
        1 ctgaccctgg tgctacaact aagacaaaat agcagtggca gagctggtga caaaactcag
       61 caatttccaa tggcgcagtc accctgtaac gggaagaact gtttaccccg tgttccttat
      121 taaactgaag tattttattt aatgagcatg actcatgcaa ggtgttccca taaatcatca
      181 gctggtttac aaactcaata actaggcttc ctgctataac taggctgtgc acaccttaaa
      241 ttattaacac gccagggcct taaggcagat ctttgatgat gatgatataa acactgtgag
      301 gacaaggtgc tctctcagca aaagattatt gactctaatt accatttacc acaggaaaaa
      361 gaaaagaaaa gacaataaaa tatgagggag aatttaaatc tca
//
LOCUS       KCKM01000994             360 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15740apa ultra-conserved element locus
            uce-2850, sequence.
ACCESSION   KCKM01000994
VERSION     KCKM01000994.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 360)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 360)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..360
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15740apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>360
                     /note="ultra-conserved element locus uce-2850"
BASE COUNT          113 a           74 c           80 g           93 t
ORIGIN      
        1 ggagtacata gacgggctac taaaatttgc agccataaat aacatagaag ctagctttta
       61 aaaaccgcag gttaaaggat gagggctgcc atgacgcaca cagagaggtt gagatcagag
      121 gagcagctaa aaggggtcgg gaggaacaat gaatcccctt gttctcagtc atatttatga
      181 gtgctccatt gcacctaaag ttcatatttt attggctagg ccatggggtt tccccatttg
      241 ctcatctctt aaaataacac ccctggttaa aatttcctat aaaacacaga aatgctacag
      301 caggcagaac ttgtcatccc tgacaactac attatttaag tttgtgggtg gggtacacca
//
LOCUS       KCKM01000995             389 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15755apa ultra-conserved element locus
            uce-4990, sequence.
ACCESSION   KCKM01000995
VERSION     KCKM01000995.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 389)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 389)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15755apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>389
                     /note="ultra-conserved element locus uce-4990"
BASE COUNT          134 a           72 c           63 g          120 t
ORIGIN      
        1 agaagcattt aactttcttg ttagcagcct cccccatgtg gcactttagc accagcaagt
       61 tgtttattat gttctgtgcc aggcaaaact gattaaatgg ggctcttaag aatcaaagcg
      121 ttataaattc atggaaatac agcaagcaat aaattccatg gaattaaaag cttactagtg
      181 ctattagcat ttcagggtgt ttgcattgtt aatagtgatg atgttcctat aagacaaggc
      241 aaaccaacag aacctgtgct ttagctgcta catttttata caatgtcatc attacttgta
      301 aattttttcc caaaaaacct aaatcactca ttgtttcaaa gaaaaatttg aaccaaaaag
      361 tctacagatt cacaggccta gtaaaataa
//
LOCUS       KCKM01000996             301 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15771apa ultra-conserved element locus
            uce-7324, sequence.
ACCESSION   KCKM01000996
VERSION     KCKM01000996.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 301)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 301)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15771apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>301
                     /note="ultra-conserved element locus uce-7324"
BASE COUNT          105 a           53 c           55 g           88 t
ORIGIN      
        1 agcgacacgg ggaagcatat ttggtgctaa aattgggaat gcactttcaa atatacttaa
       61 caaggaaatt gaatgtctta ttaaatccgt attatcaaaa cactgttcaa aaatttaaag
      121 aaagtagctt ttcattttat tcatcgagga atccattaaa gcctaagctc tgaagtagta
      181 tgtaaattat gtgcctttca aggtagagct agggcaaatt cactccatca actaatgatg
      241 aacctcatta tgtgcaggga gtattcataa tgaggaaaca agccacccgc cattccatgt
      301 t
//
LOCUS       KCKM01000997            1117 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15787apa ultra-conserved element locus
            uce-660, sequence.
ACCESSION   KCKM01000997
VERSION     KCKM01000997.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1117)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1117)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1117
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15787apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1117
                     /note="ultra-conserved element locus uce-660"
BASE COUNT          361 a          227 c          193 g          336 t
ORIGIN      
        1 agggcctcat accacaatat tgaactcaac aaaattattt atgtaagtgc taatactgca
       61 aactcagtat ctgtggtgat atacacaaaa ctcaaccatg atgtccccat gtatcaggtg
      121 agaaataaac tggagtcgtt tgttttgtcc atatacttca gaatcagcta ctttgttttc
      181 tgtgaatatt tctgtggcag attcgtaaca accaacacag gctaagaaag gtaactagtg
      241 ctgggtgttt tctaactgtg gaggagaaaa ggttctctac ttttgaggac tgacaggtcc
      301 tcataagata aacctgtcag aagtgttacc taacactgtt gtctgcatcg caatctgttt
      361 cccagtaact ctgggtctga gtagcagtaa tagaattaat tatacttcat tttgctgtct
      421 ttaacagtat tgaccaaatt taagaacaaa tgagaagcgc ttatcaagct tgaagaaaat
      481 aatccatcag tggcacaatt taaattctct gcagttctct tattaatcaa agtaacactt
      541 actatcctat ctccacttcc cattaacagt cattaagcac tgttgctgat tgaagcaatt
      601 tctttaggga tctcaacctc atttttaaga gaaccttcta cagtggaaaa caatatcata
      661 caggaacact gacttcaaga gaggaaaaag gttcttcaat catgttctga ccttgacatt
      721 tctctgcagc agaagttcac caagtacaca accaacatgc tccaaacttc tgctgtcttt
      781 cttccagcaa catcagtgcc cccctattaa ctagggagga aaatgccact tcaaaaaatg
      841 gttatagcca gcaggttaag tgtctttaac agttgtactg gtctgaatca gtgattatta
      901 tttatagagt cttttcatcc acagggaacc aataaacaac aaaaaaagaa atcatgaggc
      961 agctcattct gccaccttac tgtcaaccct cagagaaatc caggctgtga taaatctcaa
     1021 aggttatacg gtacagaaaa gatttctgat gttgactttt tctccctgtt ataaacaatg
     1081 tcacagattg atagaattta ttggaataaa tgcagtc
//
LOCUS       KCKM01000998             577 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15802apa ultra-conserved element locus
            uce-2388, sequence.
ACCESSION   KCKM01000998
VERSION     KCKM01000998.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 577)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 577)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15802apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>577
                     /note="ultra-conserved element locus uce-2388"
BASE COUNT          152 a          120 c          101 g          204 t
ORIGIN      
        1 ctttcattaa gcctgagttc agtggcttta aatattgacc ctgtatctaa atttcctgcc
       61 cgggcttaat ttttagggta ttctttggca caaaaaatta tgagctagaa gacgaaattc
      121 caaaatcctt cctcacttgc ttaatagaag acggttaatg agagaaatct tcattctttg
      181 tttatgttca tcagatacct catagaagta ctgtctttcc ctaacaataa gaaccagcag
      241 gctttcaacg tgaaaattag cagctgctga ttgtatttat ctctttgact aagaggttta
      301 ttatttatct tctctgttgc agtgcccatg tggtgacact gatattgagc agctggacag
      361 attacaccct ggagccacat ctgcagctat atagatcaac accactttca ttgcctcagt
      421 gctggagaag tttatcttct gtcagctaga tttactacct acttcatgta ttgttaaggt
      481 tttcccttcc cctcccccaa ctgattttca aagagtgtta gtgtaatctg atactgattg
      541 ttactagctg attagctaag cgtttgctta ctttttt
//
LOCUS       KCKM01000999             439 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15832apa ultra-conserved element locus
            uce-2086, sequence.
ACCESSION   KCKM01000999
VERSION     KCKM01000999.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 439)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 439)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15832apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>439
                     /note="ultra-conserved element locus uce-2086"
BASE COUNT          151 a           63 c           75 g          150 t
ORIGIN      
        1 ttgtcagtaa caggtataga gttttagaaa agacttcaag gcgaaaagaa aaaagcatag
       61 aatatactgt tatggtgtta tttttgtctt tcatttttat gacaacttat ttgtacttaa
      121 aggaatcttt ccaaagagtt aagaagcatc attaaataaa gactgtgaaa tgtgcaatat
      181 ggcttattta tttaaatgtt aattggtcca acgaacactt ctaattagct ctatatttgc
      241 ttagcaaaaa gttttacaaa ttccaattgt gaaaagcagc tattttgagc tggtaagcat
      301 gttgcagaat cagctatgat ttttctatag ttctcagccc ttgaaggcac aatttaattt
      361 ttcatgtatg catactagca acggtaaaca cttgcgagtg taaagaacct tctttaatta
      421 gctgcacaac aattaaagg
//
LOCUS       KCKM01001000             647 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15863apa ultra-conserved element locus
            uce-507, sequence.
ACCESSION   KCKM01001000
VERSION     KCKM01001000.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 647)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 647)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..647
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15863apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>647
                     /note="ultra-conserved element locus uce-507"
BASE COUNT          215 a          125 c           92 g          215 t
ORIGIN      
        1 tttatattta ataattttac attttctttt gtattcattt tcccaacaat aaaaataaaa
       61 aacccttaga gaaaagaggg taaaatacct tatctgcatt tctctcgcca ttccatttgg
      121 acaacagtat ttcctaaaca tagcctattc actgctggat atgtaattac cttcagttca
      181 tagtctagac attaatgctt tcgtagtatt taagactcct tgtaacatgc ttgctgcttt
      241 aagtaagcaa ggctaaatct tgaccagata aattagcaaa gaatgcaata aaagctgcaa
      301 taaaagaact ttatcctcca aaccttcaag ttgctgctaa atgagatttc tttgaaatgc
      361 agatcagttg aactagatta gtgaatttta gctcctgtca acatcataac aaaatacaaa
      421 tacaattgtt cactggcctt atcttcatgc ttccatctgc tgccttgtta tttactttcc
      481 ttgatttact atgcagatct aaataagaca catcaaggag ggcttacaac acaatggctt
      541 cttaagcttt acatcaaggt atttgaaact gaagccctga aagggctgcc atcaaagaca
      601 tatctctaat gaacttccat atcagagaag gtttggtatt taatact
//
LOCUS       KCKM01001001             723 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15879apa ultra-conserved element locus
            uce-128, sequence.
ACCESSION   KCKM01001001
VERSION     KCKM01001001.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 723)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 723)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..723
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15879apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>723
                     /note="ultra-conserved element locus uce-128"
BASE COUNT          246 a          152 c          137 g          188 t
ORIGIN      
        1 acagctgaac atcacagcta aagcacaacg gtgcaaatta gattctaatg agaaaacatc
       61 agttgcttct ttgacaatct tgccattccc tgatttactt ctaatgaaga cacactccaa
      121 ccagcaagct cgccgtgtta aaggtcaaag cacgttacgc ctcacggaat caaggcaaat
      181 gggaaacccg tacagaaagc ttctcgtgaa gtggcgtggc aattagagta attgtgcaaa
      241 aagccgtctt cagtaaaaag taaaagaaat taagctgcct ctactgtaac aggttagatg
      301 aaaatcaaaa tttaatgtat tctcccttgt gtcatcttgt tttgtcaaga catcaaatag
      361 aattggaaag tacaaaataa caagcccttg agaaatcaca gaagccgacc tttttgatgt
      421 tgttggttta ccttgttctc agttatttga acaatgatgt ttcagattta agggcaagat
      481 aaagcttaaa aattaaaacc cgttgtcagt ttggggagga gggggtgctg tccctcccaa
      541 ataacagagc atcttaccta atcaatgaag gcaaatccgt ccaaaaccag cacacagaac
      601 aatcagagat tccacttaca cgttcaatat tcagtctggg gcttctaaca ttcattcaac
      661 ttcagcacaa actacacatc ctcctgctac cgtaggaaat tgtgctggaa aggttaaaaa
      721 gaa
//
LOCUS       KCKM01001002             957 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15895apa ultra-conserved element locus
            uce-7872, sequence.
ACCESSION   KCKM01001002
VERSION     KCKM01001002.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 957)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 957)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..957
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15895apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>957
                     /note="ultra-conserved element locus uce-7872"
BASE COUNT          295 a          172 c          211 g          279 t
ORIGIN      
        1 aggtttgaat tgtttctatg aaggtttatc ttctctctgt atacccagca ctcagatacc
       61 cctcaggaag ggaattccag tccctggctg agagtctgga ggtctctgca gtggttttgt
      121 acaagttgtc tggaaaaggg acaaagttct atgggcaagg atttgtggga tgaaggtctc
      181 agcaagagga accatacttt ccattgcatt actgtgcctc gccgttcagc tgggagcttt
      241 cacacatctc ataagctgct ccgagcctgt gcagctcata aagtgcaaaa aggaattgaa
      301 gaagcaaaaa taaatattga agcacataag aattaaatat cacctattca aatagcaatt
      361 atgccgctga aaacaagatc accacacctg tacaagaaaa gacaagcaag cccaaaacat
      421 ctgtttggat ccacctgcca agcacctgtt tcgctgtttc aatgccattt gattgctgga
      481 gatgtagagg ctcttgtgag gtaatgagtg attttacatt atgcatgatt gaaaacaggt
      541 gttctaatgc tgtgcaattc tatgcatgaa taattcagtt tgtttagagc aagatcttta
      601 aaagaagtat ggtctttttt tttttttaaa tattaaggtt attctctgca atgtatggtg
      661 gctggtcttt tcagcaggct cactgatgac catttctgta taattttatg ggtaggaaat
      721 aacactgtga aaggtaaaaa aaaaataatt atacctaaag cacataagca acgatattga
      781 aaggtttctt tagcaaggag gggggagaaa cctgtcactg ttttaaggga gaaagccaga
      841 tgacttttgg caaagcttgc ttctcaacac caaaaaaata gaggtggatg tgcctcaggg
      901 ataagtaaga gctagcccat ctcttggtcc aaattccagc tgagtctgaa tgtattt
//
LOCUS       KCKM01001003             270 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15909apa ultra-conserved element locus
            uce-3891, sequence.
ACCESSION   KCKM01001003
VERSION     KCKM01001003.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 270)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 270)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15909apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>270
                     /note="ultra-conserved element locus uce-3891"
BASE COUNT           87 a           57 c           44 g           82 t
ORIGIN      
        1 gttctaattt ttaaaactta tcctttcagt caagactaga aaaaggccca ttccaacttt
       61 tatcttcact acaaagtgct gttatcttgg gctgatgtca ggagctctat ctctctttct
      121 gctgacaagc agagacgaga gagataagat tgggaacgaa tctcacttct ctgagtaaat
      181 aaataatcaa tactcatcta aatgtaaatg agaaagtatc cccctctgat aacagggctc
      241 ttatcaaaca gccaattttc tgcagacatt
//
LOCUS       KCKM01001004             907 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15924apa ultra-conserved element locus
            uce-3331, sequence.
ACCESSION   KCKM01001004
VERSION     KCKM01001004.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 907)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 907)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..907
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15924apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>907
                     /note="ultra-conserved element locus uce-3331"
BASE COUNT          298 a          138 c          164 g          307 t
ORIGIN      
        1 agaatattct ccatatcggg catagaaatc tcttcctaca ctgtgctttt gtacagatga
       61 aaatttaagt agtaattttt ttcaatgaag agtaaaagga acagtctccc ggcatataat
      121 gcatttaaat accaattgtc tgctgctttt caccaatata acatagttaa gttgcctttt
      181 aatcactcta tttgatattt gatacatggc agtaaaatgt ttatattgca aattgtacag
      241 taaaccttca gtttaggagc aaattaatag tctggaaccg tgagaatctg actatatctg
      301 aatattgatg atctcacttt ccgagtctct ttgggattgg aggtgcgagg tgttgatcat
      361 tgcttctcac tgataagcaa aatatttcca gagcgtgaag aattctatgg tgtgtgagaa
      421 ggataaacca taatctgcat caacacacta acttctcctc tgccatttgc attgaaaatc
      481 aggtagaagt tatgctaagc tctctattat agcctcatgt atgtgaaagg tcttcccctt
      541 catttgaata aggcctctta tgcatgtgaa aaaagcacat ttaaaaggaa cgttccttta
      601 attagggtgg catttagaag cagaatcctt aaatgttcac tttttgtgat gctaaattgt
      661 ggagtatttt caaatatgtt gtagcagtca ttttcattac ccatttttat ttttatttat
      721 ttttaaaagg aaatgacatg ctctacaatg tgaaatgaag gagtagatta atatgactag
      781 ctagattaag gaaaatttaa atcagactgt ttgatgaaat gtaggaaaat gtttaaatat
      841 aggattagac ttacaatata gaaagcagtc aaggagatca aaagaactct gttcagaaag
      901 tcctatt
//
LOCUS       KCKM01001005             370 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15940apa ultra-conserved element locus
            uce-4902, sequence.
ACCESSION   KCKM01001005
VERSION     KCKM01001005.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 370)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 370)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15940apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>370
                     /note="ultra-conserved element locus uce-4902"
BASE COUNT          114 a           56 c           66 g          134 t
ORIGIN      
        1 taagtatggc tgtcattttc tttgactaaa gttacagaaa ttctttgaat tttatataag
       61 ggactaaatt tgtaatggaa aatgatgttt gatggtgttt aaatgcagag tatgtcactg
      121 tataaagcat agggctcttt taagttattt ttttttaact tcttgacatg tgtcacaatt
      181 tggaattctg ctctcatggg ataaatgcca gattacatgg tgtagtattt ttatcctctg
      241 tactctcact gtagaagcat acaacatcaa agaagaggca gatcactcac atcagcagaa
      301 aatggaatag gactataata tgcttgcttt gatctctcct tctaataatt atcttggcta
      361 catgcataca
//
LOCUS       KCKM01001006             528 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15955apa ultra-conserved element locus
            uce-3901, sequence.
ACCESSION   KCKM01001006
VERSION     KCKM01001006.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 528)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 528)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15955apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>528
                     /note="ultra-conserved element locus uce-3901"
BASE COUNT          168 a           81 c           83 g          196 t
ORIGIN      
        1 aactacttct aaaaattcta gttgaatgac attgtgatga gaccatggac aaaaagctcc
       61 tgagctgcat tttaataagc atagaatctt ttaaatttat gataaattta aatgtacaga
      121 tttaaaattt atacctgggg actttaatat cacacaattc atgttcagat gtcattgaac
      181 atgtaattgt ttctacattt cacattatgt cgtgcttgca gattgtacta taaatctttt
      241 gtgaccatga cggttatttc ggaatgttgc taacgctgat ttatgctcat tcatgttact
      301 ttaatttgaa catactattt ccaaagcagc cacttaatgc agctggtact tagaaaggca
      361 tgagtatccc ataagttaaa aaatttttac gtttcaatta caacagcttt acaggaggtg
      421 gaacattttt ccagtagatt aagttgtaat cacaaaggag ctttttttag ttacgttttc
      481 ttttaaatat attaaattgg ttttggcatg tcttactact tccagtaa
//
LOCUS       KCKM01001007             817 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15970apa ultra-conserved element locus
            uce-7462, sequence.
ACCESSION   KCKM01001007
VERSION     KCKM01001007.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 817)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 817)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..817
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15970apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>817
                     /note="ultra-conserved element locus uce-7462"
BASE COUNT          276 a          140 c          152 g          249 t
ORIGIN      
        1 ctgtgcttat agaatagatc attatttgct ctatgcagta ctggttactt actggtacaa
       61 atgtttaaac tccctgttac tacgaacaat tccctccaaa ttcttaagta agaaaatggg
      121 ttttaggcac gtaataaaag agaacgttaa ctttatctgg tctcagagtt gccgtatatt
      181 catgtgaaat tacagtgcgt taaataattg cacaaagtat aggtcagtat taatgactat
      241 actttatgcc aaacattcct tttcacagaa taagcgaagc ccaggaaata gtgaagcagc
      301 ttagcatcta ttctaacaaa cattaggatt caggctgcat acggatggga caggaccaac
      361 aggattttca actaaatgta atagttgcgc gtatttgatt acttaggacg gacaaaatga
      421 aataccataa ggaccacaat aaaacattga tagactgaac aaaaacacgg tagtgacgtg
      481 cttcaagaca gatagcagag agtgattttt tgtgacaatc tccctaaggc ttttgtgctg
      541 ttacctttat atcctatctt gtctgctttt atggccaagg agggaaaatt tgggaaacaa
      601 ttaaaataat ttaatatatc caaaatcgat aattgttttc agtctaacat tgcattcagt
      661 atctgtcact tcctagtgat gaaacctggc atgcagccaa catgatctgt atgaggatga
      721 caatactata aatatgtaga ttttggtctt ccttatctat gactatgata agacactgat
      781 agaagcaagt agagatatgg cactacatat cttagga
//
LOCUS       KCKM01001008             633 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 15986apa ultra-conserved element locus
            uce-3603, sequence.
ACCESSION   KCKM01001008
VERSION     KCKM01001008.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 633)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 633)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15986apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>633
                     /note="ultra-conserved element locus uce-3603"
BASE COUNT          207 a          107 c          117 g          202 t
ORIGIN      
        1 tgatgtgaga aagctctgtt cattggaatc tagggaaaaa ataaattgtg ttggcacatt
       61 ttattgtgtt tctgaacaaa gcaataaggc tccagcctta gctgagaata gctggaattt
      121 tggaactcac tgaaaaagtt ttctcttgga agatggatta aattgatcat tttttcctag
      181 acggagtgca cttcaggctc attttgcttt gtaattaaga agaaagccag aaacatcatt
      241 tacacattaa gaatttaata gatatatttt tctagcttta tgcattagca caggacagcc
      301 cattaatgaa ataagtcttc cttcagggtc aatttagatg ggctgtaatc ttctgcaaat
      361 atattgcaaa tgaggatcat ttaatgatct taaaactaac tgccagaaaa ggattgttat
      421 aactctccag acaacaaaaa agggttttgg catggtttgt agtaccttcg taattagtaa
      481 atgtttaatt tcaacccacc acatcacaaa attgaaaata tcggcttcta cagaggtcag
      541 tttcagtctt tctgacctga gaggttaatt ctgacaaagg aaaaaccctg tggttgtgtt
      601 tgacagtcaa taaaccaaca gctccatccc ttt
//
LOCUS       KCKM01001009            1057 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16001apa ultra-conserved element locus
            uce-1285, sequence.
ACCESSION   KCKM01001009
VERSION     KCKM01001009.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1057)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1057)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1057
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16001apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1057
                     /note="ultra-conserved element locus uce-1285"
BASE COUNT          263 a          307 c          232 g          255 t
ORIGIN      
        1 cacggctcac ggctcccaca gcttctgcca tccaaagggc ctgatgggag cagccaacaa
       61 gacgggcaag gggctcccat gaaagaggtg acgaggagga gcctctaaca acccaactct
      121 gtggccagac agagttggca ggggaagaca tctggaagtg cgtttgtggc tacccaccac
      181 caccaaggcc ccgagaacaa agctaggaga gaatgctgca gtgctctgca agccacttgg
      241 agccccacca tttatttatt tatatcatta tttttgcttt gggcaccagc tcgttctggg
      301 ccacaagggg ttaacagcaa aagctgcttt ctctgccttc gctctacctc aatttccact
      361 gctcccatca ccttcctccc ccaccccctg atcttatgaa aaaaacccat caaaataact
      421 attttatgtc tccaaatatg cagatcattt tctttaatga aagatgcttg acgtctccga
      481 tccaattaat atgcaaatgc aggcgaggat ttatttgtga cattctgtct gggtgagaga
      541 aaacaaaaaa ggcctgttaa ccaaaacact aattgctgtg actgattgtc acatatcatc
      601 attttcatag gatctcctcc atccctggct tgcagggagc tgtgaaccag gactcggaga
      661 ctagcagaca ccaaggagaa acagggcaac cagctacctg cctggcacgc tcggatgagc
      721 tggggcctcc ttcccgctgt acgccaagcc cctccagctt ccagcccttc ccagcccaac
      781 tgctggagcc actcggaagc agcttttcat ggccccttct gtgctttctg ggcaagttgt
      841 tctgttatgc ccccaaagcc tcaggaccag ggcccatctt ctctcgttct ctttgcactg
      901 tcacaaactg tgcttaggaa gcatcacagt atctcgtact ttcagggaga ggtgcccgta
      961 gaagatggac ctaactggga tctcaccact gctgcccagc tcagcatttg tggatcacgt
     1021 tctccactcc agcaactcat tctaattcat caggtca
//
LOCUS       KCKM01001010             757 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16017apa ultra-conserved element locus
            uce-6218, sequence.
ACCESSION   KCKM01001010
VERSION     KCKM01001010.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 757)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 757)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..757
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16017apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>757
                     /note="ultra-conserved element locus uce-6218"
BASE COUNT          229 a          174 c          156 g          198 t
ORIGIN      
        1 tttgtcactc cacttaccag ttcatctgcc tcacagccac tgtttgaaat tgtctgcaca
       61 ctctgatcaa tgccattgaa cgcgactcaa ggaaatcact aatacttaaa tattacattg
      121 tgtgtataag agaaaacatg ctacaaacaa gctactgatt ggcatataag tagtactctg
      181 agaggttatc acatatttgg gttgggtaaa atgtttatac acgtgcgttt tccagaaagc
      241 aagggaagtt atgggctcgt gctcataatt tctttccaaa aagacagaga tgagtcactt
      301 gcctggcact atgtactgcc tcccactcac ctgaatcgtt taaggtgcag tcggaggacc
      361 tgaggtagcc tgtagatcat taactgcttt ttagcttcac tcagaacaag aggtttagga
      421 gaagactttc gccgtttgcc taggaaaaaa aaatcaaggc gtgtcattaa ccttcagaag
      481 gggaagagag cacattgtga acactctctt tcccgtagca gtagcccggc tcacctgcac
      541 tcaggatgga cctgcaagta aacattttgt atgaatttct tcacacagca ggaacttctc
      601 caggaccaga actcacacat ttaaagaaag tgatgctcat tatcacaccg caagatacca
      661 ccttcaggct gctcatgctg acgttttact ctgagaaata caccagaaat actaagacag
      721 agccagtgcc aaagacatcc agggctggag cagttcc
//
LOCUS       KCKM01001011             960 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16033apa ultra-conserved element locus
            uce-2109, sequence.
ACCESSION   KCKM01001011
VERSION     KCKM01001011.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 960)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 960)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..960
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16033apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>960
                     /note="ultra-conserved element locus uce-2109"
BASE COUNT          301 a          175 c          151 g          333 t
ORIGIN      
        1 aataaagaca ccaagttatc tgatgtactg tatgagaaca ataacatcaa gataaaacaa
       61 catgttcctt aacatgccta attctaagca cattattttc agaactgact taaattttct
      121 ggttaccact tcatctccct tgctgtggaa atcaatctat gccatttttc tccttttata
      181 gcctcatttt tccttctttg tccagcatta tcaaaccatg tcataaattc aattatagtg
      241 ttgtgatgcc aaaacctgtg gtcctggcaa aatgtatcat gcggcatatc taggtaagtg
      301 aattaaaaaa gcatctgagc aggtatctgg tgtttgtcac agttcattct tccataataa
      361 actatgttct ccttctcatt catttgtcaa tcatagtaac taaagattat tatttgctgt
      421 atgtacgtga caccagcaat ttgcaaagtc tgttggcaag aaaatcaggt tagaatgaca
      481 gagtgagaaa ttaagcagaa gtctgatgta attagctaca acaatcagtg ctctaatttc
      541 tgatttattg tttcctgttt tcctgctgct ttcggtccat gcatactgta tgtgcttcat
      601 ataggtcaaa caattgcctt atcagtcctg gcaaaccaag aggtcagagt taacaatatt
      661 tatttaaaca tgcaggatgc ttcccactgc aattaggaaa taactattac taatagctct
      721 ttggtgctat ttcctcattt atgcaacttc gtaaagaaat aaaagagata ggggattcag
      781 attttggact tcttcatgaa tatttcttgc agatagattt acttgactag tagcattttc
      841 ttttcttaaa ctaaccacac tgaattccac taagtgacaa cctgacaaga tactaatgtg
      901 aaatatttac atttatgtat attagtttaa taacaatgga caagtggtat attttgcatt
//
LOCUS       KCKM01001012             473 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16049apa ultra-conserved element locus
            uce-1501, sequence.
ACCESSION   KCKM01001012
VERSION     KCKM01001012.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 473)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 473)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16049apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>473
                     /note="ultra-conserved element locus uce-1501"
BASE COUNT          154 a          104 c           68 g          147 t
ORIGIN      
        1 ctccaagctc aagtataaag tagatatgta atcttcaact ccctaaacac tccaatttgg
       61 ccactgaaga tgctgtttta catttccaaa cattttcccc tgtcactact ttttatactt
      121 cagttctcag gttgtaagta tttgttactt gcaaagcaac tccttttgaa cacagaatca
      181 tgggaggcat ttgttactaa ctgctaatgc agcctgccaa acaaaaactc cctgctggtg
      241 acatgaccac ctagtgacct ctaaaaatgt tttaacaatg tgaaaaatat ctccctcttg
      301 taggaaacag caatttttta aattaaatgt acattgaatg ttcacttaca tacagataaa
      361 tggtattcag agtcaccttc tctgtttcca atttcaatct tttgaaaccc agcccaaacc
      421 taaataaata aacgttgata ctaagaggaa actaagagct caagagtctc gtg
//
LOCUS       KCKM01001013             406 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16065apa ultra-conserved element locus
            uce-7490, sequence.
ACCESSION   KCKM01001013
VERSION     KCKM01001013.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 406)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 406)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16065apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>406
                     /note="ultra-conserved element locus uce-7490"
BASE COUNT          138 a           71 c           65 g          132 t
ORIGIN      
        1 aaaaatgtta ttggttttct cagaaggatt ttcttttata catagcttta tcctgtaatt
       61 ttgtccctgt tgggcacact gcctaaattt aaacacaaac agtcaagcaa tgaagaaaca
      121 ttaccacatt tactgtgaac aaaaactccc agttgtacag tgaaatttta atacatttca
      181 acttatctct tttactaatg gggagagtac aaaccctgca ggaattcgct ctgcaaactg
      241 gtaattacag tagactcact tttttataat gcatatgtat aggcagacac aagaaccata
      301 gctgcccttt tgatgtaggt tacaatagga atgttaaaaa aaaattatga aaacctatag
      361 cacttctaaa ggaatgcatt atttcatggg aagttgtcct ttagtt
//
LOCUS       KCKM01001014            1162 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16080apa ultra-conserved element locus
            uce-7801, sequence.
ACCESSION   KCKM01001014
VERSION     KCKM01001014.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1162)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1162)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1162
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16080apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1162
                     /note="ultra-conserved element locus uce-7801"
BASE COUNT          370 a          186 c          236 g          370 t
ORIGIN      
        1 acaagaaaag ctaaggattc taaaatagtt ctgcgtttgt ctgctagcga ggtgatttgt
       61 aatggtttct aaatagtgga gaatagctgc agccttgtct aacagtgacc ttaccacttc
      121 acatgactaa ttttgtaagg atctacatgt aggtgtttag atgtttcatt gcttctgcct
      181 gacataaact aatgatgtag actggctaaa catggtgaca tgattaaaca gtaatgttaa
      241 ttagtggctt ctatgagaga cttgatccct ctttttagca gcatttgtta tgcacgtaca
      301 gaagttaaag ggacagaagt ggatgttttc tttatagcat ctgttaatag cattaagagt
      361 tcaggaaaaa catttaaact atctggtaaa acgcataagg tcccttttca tgccccatgg
      421 ttgtgcaaaa acaatatctt tgtgtgaaga gaaacggcaa ttttctaaag gcagtaatca
      481 tctgtactat cacttagatg tcatgtattg atgatcctat ttcaatcaaa catatctcat
      541 tcagagagct tttgatggga ggaatttttg gaagggttta ggaaggttaa atctgtgaga
      601 catggcttcc atctggaatg cattagctac aaagatttat tagccagagt gcctctgcat
      661 aatgttccat ggaaagcaaa gccctgcatc taatttccag catgatgtct atatgaggag
      721 tgatctttga aatatcatag gtgacaatca agtttgttat aaaaatacta aatgcacagg
      781 attttcatgg cggctatttt aaatccctca tgagggctgc taagcaagta gttgatttgt
      841 tgacaaatga taaaactgta ggaatagcaa catgcatgac atttttaaac aggatagact
      901 ctttaagcag taagagtcac atcaggaaaa ttatcaacat ttactggttg cttaactctg
      961 tgaaggatgg cattaagaaa taatagaggc aatatttaac tttctctttc agtgttttct
     1021 gattaaatct gtttcaagaa gtgctgcttc tgatcagcaa gcaggaggga aagagcttta
     1081 cagattctaa tgcattaaca aagctgattc cctgcaactc taaaccatca tgtgtctgat
     1141 ggtgattaaa aattactagc at
//
LOCUS       KCKM01001015            1022 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16095apa ultra-conserved element locus
            uce-710, sequence.
ACCESSION   KCKM01001015
VERSION     KCKM01001015.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1022)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1022)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1022
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16095apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1022
                     /note="ultra-conserved element locus uce-710"
BASE COUNT          345 a          215 c          173 g          289 t
ORIGIN      
        1 acatagacat atattgctgt acttttttta aaaaaatgta tctttagtaa ccacacaaaa
       61 caatggtatg aactaaaata gagaaagtaa atattctgtc tgttttacat ttccaatcgg
      121 tgaacttctg taatcgtgtg cctataccac tgtatagttt ggctgcctgt gaacacatcc
      181 aacatttgaa acagtgaaca caaagaaata tgtttaacag cacagagaag taatcaccaa
      241 gcaaatcact ccgcacaaca gttaccatct attttccatg aagcacaggg caaagcatgt
      301 taatgtaaag tacagatatt gcaatgtagt gtagtgttac agtgcacagc gagagcccag
      361 cagtctgcct ctgagctgcg gcagcctgaa accgtgcaca agtgcttaca gctgcagtga
      421 catggtgcta agcatgtttt aaggctagtc ccagtcgagc agcatcttat ccaaccagaa
      481 acaatcccac aatccagctc tttttaagtg atcatccttg tatcataaca gattaaggtt
      541 gcagctactt tggattatgg ttaatctaac ctttatccat tcacatcttc acctgaaact
      601 tacaaggacc aagagtcaat tgccagggca taattcacaa tgacactgat ctctccttcc
      661 tcactctaat tatctggatt aagaataaca cttttgagta attattttca cattggataa
      721 acattaagct ttcctggatt tatctgagct ttttcttaac atgaaataga tccgagcagg
      781 cttataagaa cataactgac agcggtgaca gcttaatcaa ggaaacccta aacaactaaa
      841 acaataggaa atgtttgttt cacattgttt tgaataatca agagccagaa acttgataac
      901 ccactggtga accatctact caatgaccag ggaaaaagtg atatccagat caattacaat
      961 gacttgcact gtcttaataa agatgcaaca ttttctctga catgctacca gcttagaagc
     1021 aa
//
LOCUS       KCKM01001016             258 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16110apa ultra-conserved element locus
            uce-5710, sequence.
ACCESSION   KCKM01001016
VERSION     KCKM01001016.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 258)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 258)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16110apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>258
                     /note="ultra-conserved element locus uce-5710"
BASE COUNT           87 a           46 c           48 g           77 t
ORIGIN      
        1 gccgtaaaac ttaacaatgg agtgatttta acttttaaaa tacagttatg aagcggagag
       61 ctccttcaat actggaaatc aaattaaacc tagacatttt ttaacagtct tgacagatat
      121 aatcctagtt accatgtaaa tttatggtaa gctgctgtga tattagccac aggtgctact
      181 tttaatatat ggcccgcatc tggctgggaa taaaatttct cagaggactg aacatgacct
      241 cactatcaga caatggag
//
LOCUS       KCKM01001017            1017 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16126apa ultra-conserved element locus
            uce-7269, sequence.
ACCESSION   KCKM01001017
VERSION     KCKM01001017.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1017)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1017)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1017
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16126apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1017
                     /note="ultra-conserved element locus uce-7269"
BASE COUNT          314 a          187 c          195 g          321 t
ORIGIN      
        1 tgtaatggca ttcactaaac aatctgtgtg gagcagactc tgctctgttt aaagtccctt
       61 tttcaaaaaa cgcttctaac ttttcttact ctgtgattga tttcaggata gctgttgttt
      121 aagatgctgt caggcatttt gtctaactga aatttctcca ccgttgtgaa ggttcctaag
      181 gtacccagca aaacaaaact gtttttagca tttattcttt tacctctcct tctaaaataa
      241 taatgaaata agataaaaca aataaaaata ttaacttaaa agcaaagcgg gagagaaacc
      301 aattctcttt gattggtttc cactgctgct aattttaatg ccacccattg ttcagctctg
      361 cagtctaatt ttatgttaat atcctgaaag ttgtcaaatc ttggcaaaac ctatgcataa
      421 attacacaga aagtagctca caggaggggg aaagtaatga ctgtcatggt tagccaaacc
      481 cattaatagt ctgacaagca ataacccaag agctctggtc aactgctgca gacatctgtg
      541 aaacttttgc aattaatttt ttttggagga ggtatcagct gtgaaatagc acataagtga
      601 ctgattatta tcagctctgc tggtgagggc agaactgatc agctccaagc attcatcctt
      661 ctactacaga ctgatttctt tgtgagtatg gatgttttat ttttcagtat tttctaaggt
      721 actcaaatct ctaggaaagg aaaacgagag tcagttgtac atgtgtagca ctttacttat
      781 acgtaccctt tcacatcagc agtttttgaa gaactttata gaggtcatta gtattatctt
      841 gtctataaag tggagaaact gaggtagaga atatgtctgt gtgctcatac acatgatagt
      901 acactagaga ggctgagaaa tgaacagaag gacttccttg aagtcagata ctaagccagg
      961 gatatctgct gtgccagaca gtgctcgtga gactgtacac tcacctgttt aaaagct
//
LOCUS       KCKM01001018             216 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16141apa ultra-conserved element locus
            uce-4542, sequence.
ACCESSION   KCKM01001018
VERSION     KCKM01001018.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 216)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 216)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16141apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>216
                     /note="ultra-conserved element locus uce-4542"
BASE COUNT           76 a           34 c           44 g           62 t
ORIGIN      
        1 ttgatgtata ctgaaggctg ggaaaattaa ggccatttcc catggtgaga atgcagtgat
       61 ttcagtttgt gagagtaaat taaacctttg ggagaatttg tcttccatta aattgaacag
      121 ctaaacaggc acagaagatt ttaatgtcac cagcaacaaa ccccaaaggt tacaaaaaga
      181 aaaagaaaca ctgttttctt atttggaagt tctctg
//
LOCUS       KCKM01001019             709 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16157apa ultra-conserved element locus
            uce-1698, sequence.
ACCESSION   KCKM01001019
VERSION     KCKM01001019.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 709)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 709)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16157apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>709
                     /note="ultra-conserved element locus uce-1698"
BASE COUNT          227 a          136 c          144 g          202 t
ORIGIN      
        1 taacctctcc ttaggagctt ataagaaaat ccactgttga aataaataac aactctcaac
       61 aaatgatcaa agaagaaata aatcttttac ccttataaga cttttttttt tttttaaacc
      121 tgaaatccca ttttttaact ggataacagt taagaggcta ccggccatct atttctctgg
      181 gagctacgtt ttaaatgttt gctggatgga tattggacag acaaatggat ctgcggtcct
      241 cgggagcaaa agcttttaaa ataaagtttg cgtgtagtat atgaaaaaaa catattgttt
      301 ggaatttaag ttctaatatc taggaataaa cagagcatta aatcaagcaa aactgtgaca
      361 aggccaatat gcacatggat gatgccagcg aggcatctcc agccctttgt tcacagctta
      421 acaaaactgt gccgtcacac cactttagct caacagtgcc tgtcgaatgg gcatcagcag
      481 atcagccaat gcctgtcaca cacacagctg aaaaactgtt tgaaagcaag gcttacttta
      541 gcacaagtct ggtagggaaa gtgagaggga tttttaatca tctggtaaag gctacatata
      601 gatattcaac ggggaaaaat gaatgttgtc agctctcttc cccaggaaag cgacacggtt
      661 ttgctctttt tcacctctaa ggaagggatg ggtcttgagg gttgtgcct
//
LOCUS       KCKM01001020             876 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16172apa ultra-conserved element locus
            uce-2477, sequence.
ACCESSION   KCKM01001020
VERSION     KCKM01001020.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 876)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 876)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..876
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16172apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>876
                     /note="ultra-conserved element locus uce-2477"
BASE COUNT          264 a          191 c          161 g          260 t
ORIGIN      
        1 aatggctgag gagcggcaca gaccatcaga caaccaaata accttactat agtgtttgtg
       61 tcttccattt ctaattgcag caaaacatgg ggcaaaatat tggaagtgcc taccctctaa
      121 ttctaattca gtgagtctga gaagtagata aggtactgca acaagaacaa cctccatgct
      181 tctagcaggt tgaatgataa cccttaaagg catcccatta aaaaccaaca aaaagattct
      241 tcacctcctt ctcttctctt ccctatgccc ttaaaatgaa cgctgcaaat tgttagccaa
      301 cgctggcaat tggagaatga agcagcttgc atgtgagtat attttcacag tgattctaat
      361 ctgagaaatt tactcgctct tccccttcta tctgataaac tatacattca agctttctca
      421 ttagtgttcg gatcaccaaa gagagctgga gatgaatcag tccatccacc cctcctctcc
      481 ctgctctgtc gagattattt cattgaaatg ttcattttca tccctgctgg caacattaga
      541 atggaagtat ttaacctgtt tccattactt atacaaatta ccattatggg gtaggacaga
      601 tgttagaagc acgccacata actgacttcc atacattctt tacggggagg ataagaagag
      661 ggaaagctgt tagatcatat tatccagtct caataatgtt ctctccgcta ctagattcat
      721 taacttccaa catcaacgtt tcactttctt tctgcgtgaa aatgctccgt ctccttgagc
      781 tcatttaatt tggagcagaa aatctttgtc agaaataatt ttttgatcag gtgctctaac
      841 taaggggtga aggggggctg gggaaagaat aaagaa
//
LOCUS       KCKM01001021             873 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16188apa ultra-conserved element locus
            uce-1360, sequence.
ACCESSION   KCKM01001021
VERSION     KCKM01001021.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 873)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 873)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..873
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16188apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>873
                     /note="ultra-conserved element locus uce-1360"
BASE COUNT          274 a          164 c          157 g          278 t
ORIGIN      
        1 gttttcccta aaaataaaaa tcttgcatgt ccaggataat tttaaatgga tactttagca
       61 tttttattat tcaaaatggg tgcccacgac cacaccagac cagggatcct tactcttact
      121 aatgaagaaa attataacag acatggctga agtactatta ttcccctttc tctcttcttg
      181 ctgtcttcag tgttatttac attgatgtga attgcaagta aaccaatatt atccatctct
      241 ctgttttttc cttaatttgt tgactttaat tttagtaagt cttaaataag cgcttactga
      301 agatgaagta agatatgcaa gcaagtagtc cttttatcaa caattttgcc acagaaatac
      361 acaaacattt caatggctct tcattagcaa acaaatcaac aagtgatatt ttaatgcatg
      421 actttattcc atctctgtgg ggactgtagt tgagagtgtg atgtacagta cagagaaagg
      481 aatcatcagc cacaatgtcc cagggctcta tccattgagg acttctcagc ctctgcttaa
      541 agagtgcatt taattgactg atagacagta gcttctttgt tcacagaaga cagcgaagta
      601 atggcagctt gaaaatcgta ccatctacag gatctcctga gactagtaac agggggatat
      661 gtgtcaggaa taaataaata atctaattat taagccactt cctgtcaagt taactccaat
      721 ttgttggctt ttgaaggcaa caaaacgagg catttttcct cattatgctt ctctttttat
      781 accactggta atcacaggcg gattaaaggg tgcctgattg gtttttttgt caaggaactg
      841 agaagcagcc aacagtacag aaaaacagag ttg
//
LOCUS       KCKM01001022             955 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16204apa ultra-conserved element locus
            uce-1822, sequence.
ACCESSION   KCKM01001022
VERSION     KCKM01001022.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 955)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 955)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..955
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16204apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>955
                     /note="ultra-conserved element locus uce-1822"
BASE COUNT          284 a          180 c          174 g          317 t
ORIGIN      
        1 cattcaagac tctaattcgg catgtggtat gctgtgcttt tccagcagca tgctttttgt
       61 cattatctct ccacccaagt gaatgtttgg gatgggcatg ttctttcttc agttattgca
      121 gagaactaaa atgtaagcag taaatgctaa agccagattt ttctaataca gagcaccaag
      181 caaaatcttt gtgtcctcat ataattattc cgaaagagtt acaagcctgg aagtaaaact
      241 acagttctct gtcttaaaat atgaagtcat gttttcgcac aggataagaa tgtgatttaa
      301 gtttgcttta gtccgtttct tcactgtgtt gtgctgacac gattgttcaa agaaattgtg
      361 cttttggaag gaaaaggtta aagtttgcta ctgatattca tcaggagatg gatatttaat
      421 ctttaatctc ttgttctagg cccctacttc ggatcaactc attatcccga ataaacgatg
      481 tgtcattccc attatttatg tttcactgca gccaaagtat ctggacctcg ttttggtaag
      541 caccattcat ttcgacccat tcagtattaa tctcccttct aacatctttc ctgtcctatg
      601 tgctgtcccc tatttgcttt tatgttttcc gcagagtgtt tataaaagga taatctttta
      661 caaagcagac agaatttttg tgtataaact gctctgtttg aatgcctcat tgatatacca
      721 tctaaactga agtgttcagc aagattagtg catccactga gccactgaac tgggtaaaaa
      781 tatgggaact gctcctttct ttatagcaag agagggtagc taatgatgcc atcttctttt
      841 aaataggata cttttagcag atggactctg acaatatgaa tacattccac aaataaaaaa
      901 taatcaacaa aggaggtggc ttattgtgac aaatcaaagg ggaaaaagca caaaa
//
LOCUS       KCKM01001023             972 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16220apa ultra-conserved element locus
            uce-990, sequence.
ACCESSION   KCKM01001023
VERSION     KCKM01001023.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 972)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 972)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..972
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16220apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>972
                     /note="ultra-conserved element locus uce-990"
BASE COUNT          307 a          201 c          193 g          271 t
ORIGIN      
        1 ggataaggaa agcttaacca cttacgtgtg tgcagtgaac cctctgctcc tttcagagag
       61 gctcctggga agcagctata tgctactaaa gtatttcagt ctttgggcaa agtaagcttg
      121 acatccctgt tggcacctct gctgagaaca aacactggcc ttactcagga aacatcaaac
      181 gtgactttct gccagctggg gcaaagctga atactgaagg cagggggagg agaggtcaca
      241 gaggaaatag tagttaacgg ggtaaagcga gtgttataat ccccaaattg cagttggact
      301 gaacgttttc agacaatttg cctgtctaaa ccaagacagc atcatttttc tttcttctag
      361 gagagggtta agaataatct gaagcttaga aaatggctgc tgttgatact agtgaggcct
      421 tctctttaac tagatccttc aggaaaaaac aaattaatca acagccagct gaagtgggtt
      481 taatgattgc attctgcata caatcagctt ttcccttttc aagggccatc aatatgtcaa
      541 gggaagacat atctgaagga tatagctctt aacatcaagg ttatctattc tccacaaggc
      601 tcccactcct tactgggctg atactttaca ctgcctgtgt ctaacatttt catcaactct
      661 gcaatcaatc aaggtaataa tgttgtgcaa aaaatcaatt aacaacgcaa ttaaactttc
      721 cttattatct caaagggctg aaataatacc taaagggaag atagactcac tgaatgcaga
      781 catccataac ccaatgtgaa agtgaattat gaggttagac agatgcaggc atgtactggc
      841 gctgttattt tcaaagggat atatctcatc caggcagtgt atcagtcacc accaatccca
      901 taccctaaaa ttccaaatta cttttaagaa atatacgatg tgcaatatcc atttcatatt
      961 ctcttttaga ga
//
LOCUS       KCKM01001024             880 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16250apa ultra-conserved element locus
            uce-2645, sequence.
ACCESSION   KCKM01001024
VERSION     KCKM01001024.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 880)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 880)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..880
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16250apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>880
                     /note="ultra-conserved element locus uce-2645"
BASE COUNT          216 a          194 c          249 g          221 t
ORIGIN      
        1 caagaaaaga cccgtattgt ctccaaggcg aaaagaaagc tgctgtgtca cttgagcgag
       61 gctgttttat ctggaaaggg gctgagcagc tttgaaagcc cgtttctatc cagctccacg
      121 tgcagtgggg acttgggggt cctcaaaagg tgcaaattgc agctgcacaa ttaaataacg
      181 gggtgtgtcc cggcctccgc agtcccctgg gcagcacagc cctaacgagg agacagtggc
      241 attactaatg agggctttga cctttacatg gcttttattt aatacacatt ccacacttcc
      301 ccaaactccc atccaaaaca ttgacatttc cgctgataga ttgggtcaga ttttggagta
      361 gttgggggac tcaattcact cttacaatgg ctaaattctt acagctaaat gggcttattc
      421 agttagtgca gcagctggtg tgatttcgag aagaaaataa acatttcctt caaatatttt
      481 gattggcaac tggacaactg aaatactcaa gctcagattg ccagggtcca aaaaagcaaa
      541 tgggggctgg acggcgagta agcggaggca aaccgtagta aatcctccga ggcagcgcta
      601 ccacacagat tgtgtgtgtg tgcgctgggg aaggggacag caagatgtga ttttttaaag
      661 ctcatagtcg gctgggattt cgaagggagc aaagcctgag ggtacggctt cacccgctcc
      721 catttccctg gcattcgctg agcacatcac ttgctccggg ttgctggttg acggctggct
      781 gagcgtgacg gagggttgct ttgctgtgga gcgcagcggt tatggagggt attgatggcg
      841 atgttttact tggaccctgc tggggctgtt tcggcgggga
//
LOCUS       KCKM01001025             806 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16266apa ultra-conserved element locus
            uce-7940, sequence.
ACCESSION   KCKM01001025
VERSION     KCKM01001025.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 806)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 806)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..806
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16266apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>806
                     /note="ultra-conserved element locus uce-7940"
BASE COUNT          221 a          163 c          127 g          295 t
ORIGIN      
        1 cctcaataat actatgtaaa tagtaattaa gcttcaccat ttatccaatt taaggaaata
       61 catgaaataa atacttttca aatccttttg ttgtgcttga tttttcaatg tcacactttt
      121 ttctctattc ttctgaaatg cttaaactca gattgtttct ttcccattac cagtcttttg
      181 tatctgcatg tctggtgggt ggctttgttt tttatccctt cggaccctga cctggcagtc
      241 attattttgt cttttatctt catctttttt ctcctttatt tttccttctt tttcttatta
      301 gactagtcag ccttgatatt agtcttccca gagctactat ccattacact gtcagcaaag
      361 caagctgcct tactgtaggc caagtgtcaa cagaaggtga ggcagaaaat cagccacaat
      421 ctaaagctaa ttaccctgcc tagaagttaa ttaaatactt gttaggagca gcagggtaga
      481 tcctaattaa acttgtctaa tagcagtatg ctgacatact ctgacactgg gaattcctac
      541 agggtttaaa taattgtaca aagggcaata atacctgtca catcatggtg tgcaggcaaa
      601 ccctgaagat gcacatttct cagtattttc tgtactaatt tgccacatat tgtgcacttc
      661 acatgtgttt aatttacaca tgttttaatt ttggtgccct ggatctttct aaattacttt
      721 actgttgctg atctaagtgt aaaccactgc agagggagat ggtcactagt atttcattgt
      781 atcatttaat acactaaacc cgataa
//
LOCUS       KCKM01001026             850 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16282apa ultra-conserved element locus
            uce-1819, sequence.
ACCESSION   KCKM01001026
VERSION     KCKM01001026.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 850)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 850)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..850
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16282apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>850
                     /note="ultra-conserved element locus uce-1819"
BASE COUNT          275 a          130 c          169 g          276 t
ORIGIN      
        1 agtgcctaat acctgcctgg agcaaaggaa ttaatatgct gtattctgca gtctgccatc
       61 ttcagctttg ataaatactt aaaaatgtat ttttaaaaag tcattaactt ctgggatata
      121 agactcagca atcatacttg gagcatgtga agctgctctg aaatttgtag caaaatatat
      181 accacatttt taatcaggga attgtgtctc ataaagctct aatacctgta agtgaattaa
      241 agtattttac tcattcaaat attccattca ttatatgatc taagaggaaa tctatggaat
      301 cctattataa acttagaaaa aggataactc tgagtttaag ccataaactg aagtaatgca
      361 gatgaactgg acacatatgt tgcacaatag gtgattcaga gcaatatagc acatgctgtt
      421 ttatgatatg gaaagcaatc aaatcttatt tgcaaaaaat tcagatcaat tgaattttaa
      481 tgagaagcag gtgctggagt gtagcatcca caaagaattc tgggaatgtt taaaattagt
      541 cccatatttg ccaggagaca gttgggtaca taaacttttt tatttcttga ttcatgggtc
      601 tgttcggact gtagattgct ctgccattct gagttcagca atttgaataa attatgctga
      661 aaatcacttg gtggttcatt ttgtgtgaaa ttatattttc gctggaaagg ttaattttga
      721 agggagcttg aatggctgga aattgtgcag ctggggagtc tgcatgttca gaaggcagca
      781 gttattaaaa gcgattgcat ttcctcccag atttctcctg agaccagaat cagtggagat
      841 gttaaacctt
//
LOCUS       KCKM01001027            1009 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16297apa ultra-conserved element locus
            uce-4658, sequence.
ACCESSION   KCKM01001027
VERSION     KCKM01001027.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1009)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1009)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1009
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16297apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1009
                     /note="ultra-conserved element locus uce-4658"
BASE COUNT          286 a          211 c          226 g          286 t
ORIGIN      
        1 atttgctgca taatttgctg ttccatgaaa atgggcagag gaactggccc acggtttgtc
       61 atcaccatgg gaggactgcg aggtgggaca ccaattggag gcacaatgct agcaggtggc
      121 tggacagaaa ctggaggaat atttggattc tcactgatgg gaagaggttt gggaactggc
      181 gtggggattt tagtgacaga gcagttggca gtgtcagacg gagaggcagt ggtagacgct
      241 gatggtccag ggccttgaat ttggccagct gcagacgctg gggatggggc ttttctccga
      301 gcatctgcta gcggtatatt ccaagaatct ggagtcagca gctgcacccc agtgccttct
      361 gctttatttt caactggagg atgtaatgta ctgcacagtc cagctggaag attggcctgt
      421 gtctctttgt agaaaatgtc cattttgtac tgattgagac attttgcact gcagaactga
      481 agccttcttt ccccgtcccc aaaatccaga tactcttttg tgtgtcttat gtgcttacac
      541 cagtcacata cctacaacac agtaataaaa tcaaatcagg taagaaaagc aatcttctct
      601 tctttaaaag taatttttca gttgctttct aaatattcac attttttttc tagcagaaaa
      661 aaaacagtta cagttgtgaa aactatgctt ttattctctc caaaattctg gcaaactgaa
      721 tgccactccc tcttctgact ctcacagtta tatattttaa tcccatacca ctgagaagaa
      781 tcctcagctg gcataaactg tgagaacatg catatgtaac tatataaaac ctgtatgagt
      841 atggctgtga ttactcctca gtggtaatct aagcacacct gtaccatctg agatgccata
      901 ttacacaagg agtataataa ctggaaaagg actcagaaac ttgtgggcaa agaatgcaaa
      961 ccatatctgc taaactgcag cacgctgtac cattcagcat tctattagg
//
LOCUS       KCKM01001028             215 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16328apa ultra-conserved element locus
            uce-5702, sequence.
ACCESSION   KCKM01001028
VERSION     KCKM01001028.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 215)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 215)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16328apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>215
                     /note="ultra-conserved element locus uce-5702"
BASE COUNT           64 a           43 c           32 g           76 t
ORIGIN      
        1 gcgcgtcggc ttgcagcgtt ccagctccct gtgcctccat ggcgagttaa aactgccaga
       61 gaatatttca tagtttttat tgatggcatt tatcccatgg tttaacatgt taattatact
      121 gtaataaaca tggctttaat attaaacttt tccttattat ccaaagtcac cacagtccat
      181 ttcagtaaat ataaaaatat atacttaata ctttg
//
LOCUS       KCKM01001029             920 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16343apa ultra-conserved element locus
            uce-2447, sequence.
ACCESSION   KCKM01001029
VERSION     KCKM01001029.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 920)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 920)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..920
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16343apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>920
                     /note="ultra-conserved element locus uce-2447"
BASE COUNT          304 a          182 c          176 g          258 t
ORIGIN      
        1 gcatttatag cacagtgcag aaaactgctt cttccagctc cagaacactg ctgaactggg
       61 tttcggatca aatggccaca agggagctga aaaaggtgct tgttgcagac aaaaagggat
      121 agcacagcct gaataactga ttacaaaagc aacaggttca cctgaaggca acacacatta
      181 agcacaaata cccaaataga gggagggggg aaaagattta aaatttggat agagaaaaca
      241 tcttcagaaa gacagattcc catttttatt ctacatactc tgccatcatt tgctaatacc
      301 gtggcaaact acactatctg ctagtcagat ggtttgtaac atctgtataa caaatgagaa
      361 tgtataatag ttgttctggt tttgtgttcc tttacgaggc ttggtgttga taatctccaa
      421 agcacaccca tgattcttta aattaaacat aagaatcttg tctcacagta cagctaggtt
      481 atccatgtgt aagagcccaa gccaagtaat tacacatccg ctcaaaggat tagacacata
      541 agatttcttt aaatttttaa taaaactgca cagctgttgt agggaaaaaa ctcttttgtt
      601 ctagattttt taaaaccatt aagctcaaag tgattcacag ttatgcttca agaaaagtac
      661 tttagaagta tttctgtcag gcattttttt agtagattta acatcacttt aacttcacgg
      721 caacagattt gagtcaggaa taatctaaag gaaaggcatt ccgtcaaatt ttaaagaaca
      781 cttctccgct tttaccggaa cacctgcaaa tgcattttac tcaaccctat aaccacttag
      841 agcgcacgtt agtcagtgcg cataaacctg cgtgacgttt ggttccgcgc agtcggcctg
      901 tgggacaaac agaaaggtgg
//
LOCUS       KCKM01001030             509 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16359apa ultra-conserved element locus
            uce-5888, sequence.
ACCESSION   KCKM01001030
VERSION     KCKM01001030.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 509)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 509)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16359apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>509
                     /note="ultra-conserved element locus uce-5888"
BASE COUNT          188 a           81 c          114 g          126 t
ORIGIN      
        1 tgggaagcca gggaccatca cagtcagaga caaagctgac accctaacat cagagccgac
       61 aacagaagga gagaaagttt tgttttctct agtgcactac tgtaaagtac ttaaccagct
      121 ctgagctcgg tgaagaggaa gagatagtcc aaaagacagg cagagtgttt cacataaaac
      181 agtctcacta ctaaggaagt gagaggcgag agaaattttt ttgaaaggag aggaaaaagc
      241 tagacgttta ttctgttcat caaagggaag gaagacgcaa atgaatcaga aatcaaagat
      301 tgaatatcat tggtcttgct gacaaagcaa tcagcagtcc cctcacagca agtacagggg
      361 tttgttgaac aaagcgaagg aatttaaaag gcttgaagaa aatagggtct ttccatttat
      421 aaaattagac ataattttag aacagcgttt tgatttagag ctgtaaagaa tttctgcatt
      481 aaaaatatat aaattccaat ttttgtgat
//
LOCUS       KCKM01001031             974 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16374apa ultra-conserved element locus
            uce-7129, sequence.
ACCESSION   KCKM01001031
VERSION     KCKM01001031.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 974)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 974)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..974
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16374apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>974
                     /note="ultra-conserved element locus uce-7129"
BASE COUNT          281 a          200 c          173 g          320 t
ORIGIN      
        1 cattgcaata atcatacaat attaggcaca gaacaacaaa ataacccatt aaggtatgca
       61 gactacagcc cctttgctgc ttttctcttg tctcctactc ttctacgtct cttctggttc
      121 cattaaataa cacaggcagt gcagcacgct ctacatcacc tgactgggaa ggataatggc
      181 agtgagctcc ttctcctaac ctcactggca gcctactgca gtgctatcag ccaggaaagt
      241 gactttagga agcaaggtca agttcagaaa aggctttttg cttagcctta tttcatcttc
      301 ccctgcagag caatcattta ttcaaactac agttttaaat gtctcctcaa agagttaact
      361 tattataaac atttgtgaaa gaaaatgccg gtttacgctc aaattataga gaagtctctt
      421 gtctttatca agtctcaagt gtatttgcac ttaaaagctc cccccctccc caacaagaaa
      481 caatagtgca ggtgcattgc ccttcagcgt acaatgtatt tatcctggga ggcaggaagt
      541 tggtttcaca cctgtttctt ctttttattt gttcttggcc tggctaattt gccgaatgtc
      601 atgattggta cagctgaggc tgtcagaaag aattaccact ttttaacatg acggcctaat
      661 tctggcagtt cagattttac aatgatttgc cttttgttct ttctttcagt agcggtctgt
      721 tttctgtatt gcacacaaac taaatctgat cagtggtaac agaaaatgca agaataagat
      781 aggcagcttt attagatgcc tgaccctttt tgatattatg ttttaaaagt tctaaagaca
      841 atgatgttat ctctgatatg gtataaaagg gtcttgccat ggactataaa ataaatatta
      901 tttcaaatgc attcatgact tattttggtc agaattcaag gactactgaa atttaagaga
      961 tattcttgtt ttca
//
LOCUS       KCKM01001032             877 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16390apa ultra-conserved element locus
            uce-7308, sequence.
ACCESSION   KCKM01001032
VERSION     KCKM01001032.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 877)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 877)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..877
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16390apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>877
                     /note="ultra-conserved element locus uce-7308"
BASE COUNT          250 a          171 c          231 g          225 t
ORIGIN      
        1 gaaaatcaca tgattaatgg aactgagtga tctctgtctg agagcggcca ggaagtgaat
       61 taacagaaca ggggttttgg caggtgtgaa gcactggcaa agctgagacc tgggtctggg
      121 caggcagaga agccctggcc ttggtgggag tggccttgca aagtccatga ggaggcggtt
      181 ggctggcaga actgggggca ctggaagtct tggcttatgt ttggatacaa acagtgtgtg
      241 cggcttgtta acccttcaca cagcatggcg gagttaggag tgctcacagt cctctggcag
      301 aaggagatgg gagactaaca gaagttgata tccccaagta aacagtgatg gagtgtgagg
      361 gataaatgaa caaatacaca gaaatgatca gattctttct ttcttgcctg cttttttcac
      421 tcttatttct ttttccctcc atgtcaacac caaacaagac aggactaaaa ttaatgggga
      481 aagcagcaat tagcaaatta ggttagcggc atgttgcagt gtgccatggc tgccaggtgt
      541 gaggggctct ggcagtatat ttattaatgg ctgtcagaaa agtgacactt tgatgaatga
      601 agctgggtaa tcggcaccct ccgacagcga gcactgagag gcctgaacat gctaaactac
      661 aaaatcaaac cttttttaac ccccatacaa aaatacaaca acaaaaatca ctgcaagagg
      721 agtgtgtttt tccatcagga attggagttc acactctcct ccaaatatgt gtaacttgct
      781 agggagcagt tgccaggctt gaagttcttt tcctttcctt ggaatttggg acttgaggac
      841 ttataaatgt aggcagatta aaactgcatg gcttgct
//
LOCUS       KCKM01001033             857 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16406apa ultra-conserved element locus
            uce-2638, sequence.
ACCESSION   KCKM01001033
VERSION     KCKM01001033.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 857)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 857)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..857
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16406apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>857
                     /note="ultra-conserved element locus uce-2638"
BASE COUNT          277 a          143 c          163 g          274 t
ORIGIN      
        1 ggtattaaga acacagtgta aaaatctaat gccttggcat tctgttttta tattggaaac
       61 ctatcaaata gtaaaaatga atcttgaatc gagaaaagtt taaaagatag taagtagaag
      121 ttaatgtacc tcaataatat cttttctgta gactcgttac ctctttattt acccttcaag
      181 atatttgctt ctggtttata gcacaatatg tattgagcag agacataaac tgggcaggga
      241 aatgccaatg aaatgagaaa atagaaagtt aatggtgaaa ctagagtagg ctaaattaat
      301 ttactgatta tatgaccata tcccatcagt aagacatgaa ttattttgtt tacagtcttc
      361 aggttgttgc ctggctctgc tacccttcac tgttttcaat ttaaactgca gtgattgtaa
      421 agagaagaga aaataaacca aatgttccca ttccacttat aaattttatg tttataatct
      481 tgtagccatc catggaaacc atgcctgtta ttcaagtgcc tcgcctcccc aagctgagca
      541 taattattac tgatacatct ggatgtttaa ctacctacta cagactcttg aattccttcc
      601 agatttaaaa tatccgttaa tacaggagtg gggaagagtg gagtcaaagg gggaagacga
      661 gagaggaggg tttatgtcta ttacttgaat tctcaaagga tttatgcctt gcttagcacc
      721 gcagggagta aaatattgtt gcctaagcta gtgtcattca gttaaaagga tgtaatgtgc
      781 ttctttccac attgttttac taagagttct tcatgcacag tggcatagat ccacttcaga
      841 ttgatgtcca gagaaga
//
LOCUS       KCKM01001034             593 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16422apa ultra-conserved element locus
            uce-3366, sequence.
ACCESSION   KCKM01001034
VERSION     KCKM01001034.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 593)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 593)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16422apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>593
                     /note="ultra-conserved element locus uce-3366"
BASE COUNT          176 a          104 c          103 g          210 t
ORIGIN      
        1 ttttaaaata gtataaaaat atgttctgct aacttcagaa aatgcccaaa tacatatatt
       61 ttaaagagaa atgatagaaa gtttttagaa ttcacaacct ttgtttgttg tatacttatc
      121 ctggatgaaa taaacctaag gtaacaccct caccctccaa tataagcctg ttacacttga
      181 aagatttgtt cggaatgtcc agtgggaacc tggaaatcgt aataatttgt agtatcgatt
      241 gtgtgaagct atgcagctgg ggcctctagt gaatagacag gaatagacat tttattgatt
      301 aacttttaca gtcatatttt caggactctg ctgcaacata attttcactt cccagctttg
      361 tgctgctgca tcatgaaact gggattcttc tctcttaaca tttaccaacc tgaaggaaac
      421 agtatggact tgtctttctt aagctgtact ctgcagaaat gtgtagtatt tggagcagtg
      481 aattcttctg aatttcccct ctgctgtcac aacaaaatga atgttgtgta atactttcta
      541 gtaattctta tctttggtgc atttccattt ttattttcta agtggctgag att
//
LOCUS       KCKM01001035            1106 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16435apa ultra-conserved element locus
            uce-2013, sequence.
ACCESSION   KCKM01001035
VERSION     KCKM01001035.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1106)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1106)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1106
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16435apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1106
                     /note="ultra-conserved element locus uce-2013"
BASE COUNT          287 a          273 c          205 g          341 t
ORIGIN      
        1 cacatgtcat taacatactc catttaataa gggttttcct cagtgaaaat agtgttggtg
       61 cagaaggaaa gattaaatgg cttcaaatgg atttggcacc tacttttccc cattagtcta
      121 tttctttggt ctatggtata ttagcaaaga tgcacaaaca gctagggcca acatccagcc
      181 tttaggcctg atggtaaaac atgtagctgc agcacaccaa agatgttcct taagtttacc
      241 tacgtgaccc ctcaggaata tcacatctca ctgcactata cactttccca tctgctccag
      301 tctggatggt atcctcctcc tcatgacatc tttcactgca accaagatcc tgactaaaga
      361 aataaagtga ctccatccat tcccagcagt taaggttaaa gagatgcact cggttctaaa
      421 tctcagctgc taacgctctc ttgacctttg actcgcctta gcacagcgaa gtttgatggg
      481 cccatgccaa gccgtcttct gtaacccatg agttggttaa tatactccca tttctcattc
      541 agacagccaa cagaggcaaa aaaggcagca gggcaacaaa tgctgtctcc cgcaaatgct
      601 cagtaataaa ttgctctttc agtagtgcag aagacagatt tttctttctt ttgcttcttt
      661 cctcctttta cacagaagac accaatggga agcttgcttt cccacctggc cccagctgac
      721 tgtgcccata aatttgacta tgcaatgcct gtttacgggt cgctgccgga acatggagac
      781 gggtgtgttt tctaagcacc gcgtagataa tcatggtaat tgatgtttgg agctgctcac
      841 tcctaggagc atagggtctc tttctcccag tgaggccctg ctccatgtta tcagtccagc
      901 ccgtaattaa atatcactct tttacaatat gtttctggct ccttaatgag tctaaagcag
      961 aaatagtcac ctctttcccc tttgagcttt atttgcttgt tattaaacaa tgttattgag
     1021 ctgctttctt tctctgtgtt gccaaacctg catcatttcc gttttataat tgcacaatta
     1081 gagtcagtgc tttgctttca tacatc
//
LOCUS       KCKM01001036             479 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16450apa ultra-conserved element locus
            uce-4257, sequence.
ACCESSION   KCKM01001036
VERSION     KCKM01001036.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 479)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 479)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16450apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>479
                     /note="ultra-conserved element locus uce-4257"
BASE COUNT          182 a           80 c           82 g          135 t
ORIGIN      
        1 gttaatttca agagataaga gggtttccac cgtggtgtaa gtgtcaattg tattcccata
       61 gacaatgaca ttccctaagg gaaaaacaaa agggaaaaat tttcaaagat gtacaatgaa
      121 aaccctatta gtgtaactca gatgataata actcaaaatt gctctctttg accctcttat
      181 ttctctgatg ctatgaagca aacaatgtta cctagcaaca gtagctaaga taatttagtg
      241 aagaatctgt acaaaacatc ccataaagta ggcaagtact taacataatt tgaaattatt
      301 ttgattgaaa aacctctaga aaaaaaattt caattttgtt ctcctctccc tcatcagttt
      361 tgcttattca aaggaccttt gcaggagggg tagggagcga attaaataca tcaggcagaa
      421 gaaaaaaaca tcacaaaata tggaatgatc aagttacaga aaacaagctg ttgtgcaat
//
LOCUS       KCKM01001037             233 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16465apa ultra-conserved element locus
            uce-7567, sequence.
ACCESSION   KCKM01001037
VERSION     KCKM01001037.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 233)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 233)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16465apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>233
                     /note="ultra-conserved element locus uce-7567"
BASE COUNT           80 a           49 c           46 g           58 t
ORIGIN      
        1 ctttcattag ctcactggca gggtggcact tctgaacctc attactgcag gaggatttat
       61 gaagctgaac ccaatggcaa agaaaaggca tctgtcaata attgtaggga gctgcactca
      121 cagctttgaa atctcattaa gtatgcagtt atcaggcata aagatcaaaa acattactca
      181 actccgacag aatcttatgg aagaacatta attagcaaca ggcctacagt aca
//
LOCUS       KCKM01001038             961 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16481apa ultra-conserved element locus
            uce-3135, sequence.
ACCESSION   KCKM01001038
VERSION     KCKM01001038.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 961)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 961)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..961
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16481apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>961
                     /note="ultra-conserved element locus uce-3135"
BASE COUNT          256 a          225 c          182 g          298 t
ORIGIN      
        1 taacaggaaa acaaaacccc attgcttcca ccctcttact aatattatgg ttcagctgct
       61 ttggccttag cagcagtcca cgtggagctc cctgtcagct gccacatcag atctcattca
      121 cttctgcatt gtgtcattgc agacacaaag agaacaagca actcggagaa tttcctttgc
      181 tgacacctga tacaccatta ttcacctctt atcattttag caaagtagtt acgcttctgt
      241 cagaggtaat ggagaccatg ccactaagaa aattggctgt aatttattta tcaattgttt
      301 ctacatacca caaaatagac catctacttt acggctgagt ctaaggtatc tgagagccct
      361 cgaagtccat ggttttccgg tattctaagt tctacttatg gcttttcctg tatatgacac
      421 acaacaccac ccctgtggtc ttcaaggctg acttcttctt tgctttcttt agtcacaaat
      481 cattctgagg catcccttaa gtgcatttgt attgttaagt gcaccggcct gatttggtgt
      541 taattcaatt tgagtgccct taatatcttg cgggagtgag gcaatgcatg cgaactgtac
      601 cttgtaaaaa caggttccag gtctgcctga gagcaaagca cctttcccac agcaatttac
      661 caaagttgct gataaaattt tcataaggca acctttttag tctgacccta ttgtgttatt
      721 ctaccattaa gagtcgggga actgagactg tattctggtg acagtttatc acattctcca
      781 tttttttagt atataggcag cctactgatg ggtcacagcc tatatcccct cctcttagaa
      841 tgtggaaatg gctttcagag cctgagccca gaggcctgag tagtccagtt gtagcatatg
      901 tgtgtcaaca taactgaagt gaactctgga taaaccagtc acctctaacc ttcaaatgat
      961 g
//
LOCUS       KCKM01001039            1051 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16496apa ultra-conserved element locus
            uce-560, sequence.
ACCESSION   KCKM01001039
VERSION     KCKM01001039.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1051)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1051)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1051
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16496apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1051
                     /note="ultra-conserved element locus uce-560"
BASE COUNT          321 a          206 c          196 g          328 t
ORIGIN      
        1 atatcactcg tcggggccct tgggagatgc ttctcctcta gatcccccag aataaattgc
       61 aaccaaccat cttacaatgg aagaaacact gaaccacaac tctgtttcct ggtactccct
      121 ccaaattctt ctgaagagcc tctttcatgg caaatagaat tcccaggagg actcgctttc
      181 ttcaaggact agttagctgt acaaacatac catttgcttt tgcatctctt tgaactatcc
      241 tcaaaacacc ggtgtaataa ttggataccc ttacctctgc tggcctgtgc ggcatgggtc
      301 atatatgtaa acatcaaact caaataacaa cccccaaatt taatttattt ctacctaaac
      361 aagttctttt atcataaagc aataaatttg tcttggtgct agcaatttgt tgcgggtgac
      421 ataacactgc aaattgatta atcgctactg tacacgacaa aatgagaaaa gcaaggaatt
      481 attatgaata gcgtccatct gatacagtag ggattcatta ttcaaaagtg ttagctagtg
      541 gttagctatc cccttgttgc agattacatt catttgcaga atcctacaac atgcttacac
      601 aaatcaacaa acatgcattt attaagacat ggaatgaaag ctattaaaat gtgaaaaatt
      661 gcctttttct tttaaaaaaa tgagtcaagt ttggtggtag gtttgtggtt tttatggtgg
      721 gggatgtttc tatgtggctg aagcaaagaa gctttttgca ttatttctgt gttcacatcc
      781 agaacttagg tacattgata ttgcttgtta gtgtcttaca gccttcatgt tgcaggaagg
      841 aggacttggt gtatcagaag tcttgggcta gaattacaaa tggctgtcta tgcccttcca
      901 aatgcttttt aactgttaac attatatttg taacaacagt ttgcgatcac gtctgagaaa
      961 cttgttctac ctgaggtgaa gtacaaatga tcaagtaaaa aaataacatt tagggccaag
     1021 atgttccagg ttccccaaga tgaacactgg a
//
LOCUS       KCKM01001040             532 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16512apa ultra-conserved element locus
            uce-235, sequence.
ACCESSION   KCKM01001040
VERSION     KCKM01001040.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 532)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 532)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16512apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>532
                     /note="ultra-conserved element locus uce-235"
BASE COUNT          196 a          110 c           74 g          152 t
ORIGIN      
        1 atcagtaaac tctaataaaa tgaaattcta taaactgaaa tggtatccaa ctggtaatag
       61 aaaatgaaaa caatctaata aatgtaagaa acgaaaacta cgcttttaac aagaaaaaaa
      121 taagtaatat tctataatgt taactacgat aacatgtgaa gtcacctata ctttcttaac
      181 acgattgaaa ttacattggt atgggtttta acccgtaatg taatattcta aggctttaat
      241 agatgtacag tacaatcagt aaaatcaaca catcattctt atactataaa gcatctctct
      301 caagcataaa aactcgcagt aaacttggaa gtatggcgag ttctacaacc gaactcgcgc
      361 ttctcccgcc cacgcgacgc taccagtgac ctggccccca cgtcagcact ttgctgaaca
      421 gagcaaaaat atcctttact agctgcaaca tccaaaccac aaaaaggaat tcctttggac
      481 gaacccgctc ttaaaacttg aatgcacatc tatttttatt ttttttgttt tt
//
LOCUS       KCKM01001041             697 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16528apa ultra-conserved element locus
            uce-1371, sequence.
ACCESSION   KCKM01001041
VERSION     KCKM01001041.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 697)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 697)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..697
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16528apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>697
                     /note="ultra-conserved element locus uce-1371"
BASE COUNT          222 a          136 c          137 g          202 t
ORIGIN      
        1 caaaaagcct ttccagtgcc atgagctgaa ggcaggttcc aattgttaag tcattctgac
       61 ccgggctgaa tttaaaggca ggctcctgta gctagcggaa cttgctggag gcagcggctc
      121 cacaaaaggc actaaaatca tatgtctcat aattattctt ttgactcagt tacccattta
      181 ctctttattt ttatatccag tggaacctga gggcagcaaa tactgcgtaa ggggaacaaa
      241 tctcgtagaa tagttcttgt tttggtacat tcactttgtg gtgatttatt aagggctgct
      301 gaataagcct gattaaaatg cataaacagt tctgaacagt aaacaaccat gtctaaggat
      361 gaaaaaatgg gacccacatg ctgtgcatgg aaattgccct taacaacatg gcctattgtt
      421 gaacagatag gaagccaaag gttgcttgta atcaaatctg aagtttccca tcacttataa
      481 aagcaacact tccttgtgta aacgtttcaa tttgttgttg ttaaaaactg cttcctgact
      541 taatccctac aggaacccac gatttctttg attgtcaggt agaaaggcaa tttcagataa
      601 agtaacttag atttaggcaa agtaaaataa atatgcttag cccaagtgct cccgcagcaa
      661 taaaatctgc gtagcttcct aagattaatt agaaaaa
//
LOCUS       KCKM01001042             980 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16544apa ultra-conserved element locus
            uce-3541, sequence.
ACCESSION   KCKM01001042
VERSION     KCKM01001042.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 980)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 980)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..980
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16544apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>980
                     /note="ultra-conserved element locus uce-3541"
BASE COUNT          250 a          276 c          222 g          232 t
ORIGIN      
        1 tttttttccc cttttttatc ttcctgcagg cacgtgccga tataaaatac gggatcaggc
       61 agagcagctc ctcgcccggg ctacagacac acgtctgcgt aatggatccc tgacatcttc
      121 ttctcccccg tttttgtccc cgtgaggctg cccctgcctg gccatgtatg aatgaacaga
      181 agcgcctttc atcccccact tgcccagcgc ttcaaaagga actacgaaaa tagcagcgac
      241 aagaccccag ccgcctgcca aaagggccgc acacgtcccg ttctcgcagg cacgcagaaa
      301 ggttggagag ctcagcaaaa tttttatgta caggagcagg cccaaggaaa actcacacgc
      361 cataaccaat tgtggacaga ggatcatcta tcagcagaca aatgcaggaa ctccagaatg
      421 tctctcctca aatgaaataa tatatctttg aaagccaatg cccgttttag gcttgaggcc
      481 catatatcaa gcctgagagg cttgtggata cgctccaggg ccattaacct tccacctgtt
      541 tccccttgtc cttcaggatg agaccctgcc cttgatttta ctcccttccc ctgttcatct
      601 tccgacagag tgtaaatgta aagcagaggg cctgcgaaat aattcaaagg caatggacca
      661 gggacatggt tacaaatctc tgccactggc actgtgactt atgcaggcag tttgtcacac
      721 atgagccagg tgacctctgt gacataacag agaaaaatat cgcccgagat caaaagatga
      781 gattcagagc gctcccgact aacgctacgt ggtggccgcg ggcatcctgg cgtccgaatg
      841 ctgctcgcag cggctgggct gccctcctgc tcatctccct gatctttttt ctctctttgg
      901 aaatcttcct gtagcctgaa catcggaact tgcctcaaga aagaccatta ggttgggaag
      961 cagaggcaga aaatgtcatt
//
LOCUS       KCKM01001043            1031 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16559apa ultra-conserved element locus
            uce-5593, sequence.
ACCESSION   KCKM01001043
VERSION     KCKM01001043.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1031)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1031)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1031
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16559apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1031
                     /note="ultra-conserved element locus uce-5593"
BASE COUNT          292 a          244 c          231 g          264 t
ORIGIN      
        1 cagacccctt tactggtcaa caaagccact gattcctgaa gcacagctgg cacacaaata
       61 taaaagcaga tgtgatgcag tgcaaggtct tcttggggaa aggactttgg gaacttccca
      121 tacagatgtg tgttacgtct ccttgtacat actggagggg aaatggaaga cgagaattaa
      181 gactgtgttt tcatttcctc tttcttgttt gttacttggt ccttctctac tgaaagaaca
      241 aaaaaaacct gacaacaaaa agctcagctg cacctgggtt tttacataaa tgttcttttg
      301 cacttcaact cgttcaccgc ctggcaacac tgaactccag aaaatacggt gcactctctc
      361 tttaagaaag actgctccct gcccagctgt tgacttgcct gaaggtgaga cctctgctta
      421 aattcatggc tccagctgtc aaaagcaaag aaaagcagct tttccttggc ggctctctgc
      481 tttgggtaga atttgacatc ttcctcactc agcagaattt aatcagcatc aagtgcccac
      541 agccgctcag ctccgccact gctgggctgg gaagccagac ctgcggagga gaagaggggg
      601 agaggccgta aggcagcagg cacaaacaga cacaagcaca atcgcctatt tctataggaa
      661 atccgaggct tgtcaccgtc tagggagaac ctcattatac cctttgactt aagaattgct
      721 gttatcaggc agtaacttta cctggtttag gctctgctgt gtcatcatga gtagctgaga
      781 atggtaaatg gagtgagtta ttgacagctg acaatgacac tgttttccaa aagaaagctg
      841 gtgaaatgtg ctcagagata tggtttccca gacttgagta aacaagtaaa gccaaggcag
      901 cgaatcctga gatcaccatg ccctgcttgc cttccttcta ggagaagaga gtgccttcag
      961 ttattgtcac acagatgtcc tcacactgaa tgatccaact cacgtagcaa aattgttaag
     1021 ccaagcacct a
//
LOCUS       KCKM01001044             737 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16575apa ultra-conserved element locus
            uce-3476, sequence.
ACCESSION   KCKM01001044
VERSION     KCKM01001044.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 737)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 737)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..737
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16575apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>737
                     /note="ultra-conserved element locus uce-3476"
BASE COUNT          236 a          141 c          136 g          224 t
ORIGIN      
        1 aagactggtt tgtccttccc atggttttct aatacgctgt tactatgtct aaacattaca
       61 tttatgaaag ttgtaacaag cagaagcgat tagttcctag taataatggg atattttact
      121 gacactgtga tttttttctg ccttcccttt ctacttcttc cactctttat ttaaaaactt
      181 gcagtctcta ctgttttaaa gcaaaaactg tttgtaaagc aagaattgtg ctgatcgcat
      241 caaaactcat taatataacc tgtttttcca ttattagcac catctgagcc tgttgaaagc
      301 cttaaccagg gctttaattt ttccacagag agctttaaat taattagtgg tttacatact
      361 aacaaagaat ctgatacatt cataaatcaa tctaatgcag aaggattacc agagggtgga
      421 aatctattca ctggggacct cacattcact taacatggtg agtttttaac aaaagggtgc
      481 aggtgtggaa tagacgggta ccaggaagag cccgtgataa tcactttgca tcacttaaag
      541 acgcagcagg atacatagta aatcagagcc tagggcccac cctaagtgaa acccatgtag
      601 atataaaagg caatatcatc tcactttaac cttcacagct aaattgtcag agtggtacaa
      661 ttccttttgt gtaggttaca ggccaccgaa ctaatggaaa acagagtaga attaaagggc
      721 ttggatgcag aagtaca
//
LOCUS       KCKM01001045             792 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16591apa ultra-conserved element locus
            uce-648, sequence.
ACCESSION   KCKM01001045
VERSION     KCKM01001045.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 792)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 792)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..792
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16591apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>792
                     /note="ultra-conserved element locus uce-648"
BASE COUNT          255 a          148 c          152 g          237 t
ORIGIN      
        1 cagacagagt ccattaaggc atctaaatgt gacttaccac atgtgttaat tggtaggagg
       61 gggggaagaa aacacaaccc tcgaatgtgg acatttatgt attcccatta ttcagaccct
      121 cttgatgcca caacctccca cttccatagt ttataaatgt ttgatttaaa atatagccat
      181 tttatcattt gtaccacatt tacctcatct taccactgtt ctgactggat gagaagctaa
      241 tgtagcctac actgtctggt caattattgc atggacacca gggaccaatt aatgccatcc
      301 ataaaagcct gaatcattct gtcaattaac tagaactaac tatgtcatca gatatattac
      361 tggtgagcaa gtctatttgg ttgcaatatg tcttgaagga gagcagtatc aaatgaatca
      421 caattgactt ggacaactgc tagcataatt tcagaagatg aaaagacaaa tgtggtagtt
      481 attagtggtc ccctgaggaa ttacggccaa gcaattgtaa tgtgctaaga ctgtactagc
      541 aggtgcccac agcacaaatc aggcagaggg ttaaatcaat attttcaatt tcttaggatc
      601 aatccagtgt ttgaacaaga tggaaacttg ttagcaattg gcagaatgtg taaatgaaaa
      661 gtcaaacttc ttattatttg ttaaaaagga atcagtgctc tgcatcatgc ccttggcaca
      721 aggtaatgct ttcatgatcc agttgcttgg gcattcacta aaaatctagc agttcttaaa
      781 ttttaataga gt
//
LOCUS       KCKM01001046             825 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16607apa ultra-conserved element locus
            uce-337, sequence.
ACCESSION   KCKM01001046
VERSION     KCKM01001046.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 825)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 825)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..825
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16607apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>825
                     /note="ultra-conserved element locus uce-337"
BASE COUNT          259 a          157 c          149 g          260 t
ORIGIN      
        1 gctctgtcac agaccttgac cttgctctgc aaaaagactc ccagtttact cctctgccat
       61 gctaacccac cattctcttt gctgactgca gtactttata agctgaagtg taaattaaag
      121 atgctgttga aagtctgtct ttgctgaaac tgatgcagag attcatttct ttaggactaa
      181 tgaaacgtca agagtgctag ttcatttatc tttcttgcta aatggaaaac aaaaatcact
      241 ctgcaatggt gacatctcaa tccttctaac tgtgtgattt agtctagcca ggattttgaa
      301 ttctgaattc tgcagtagta cttttctgtt aatatggtct tattacccac ttgccactta
      361 gtttatcagt cagtggttaa atccagttct atcagtgaag taaatgccta cacattatca
      421 ctctgcagca ggctgccaac agagacagtc ttgtcctagt cattaacaag cacaatgtat
      481 gcagaacacc agaggggaat taaaaccaca aaaaatacct cagggtggta tttttaatat
      541 gagaatttaa tttgtaattt cacagattaa gaattttggc tgcattaatc cttttatcag
      601 ctcacagcag gttatttgca gaagcataac cataaggcga tattcattgg cagaaacacg
      661 tctttgcata acgttaaaca tcaggagcag tgaaaccttt tgaagggggg agaataaaga
      721 tgaaaaatca ttatatttta aagcaaggtt cttctaaatg cctccagtaa aattttgagt
      781 tacagaaaga ctatttctgt gtctagtaga taatcattat gaagc
//
LOCUS       KCKM01001047            1018 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16623apa ultra-conserved element locus
            uce-2042, sequence.
ACCESSION   KCKM01001047
VERSION     KCKM01001047.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1018)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1018)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1018
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16623apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1018
                     /note="ultra-conserved element locus uce-2042"
BASE COUNT          323 a          155 c          172 g          368 t
ORIGIN      
        1 attggaattg tttacatgtt atttgttgat atttcccagc ttctggatta atagcaaacc
       61 tctttttttc aatcatctga aaaccatttc tccatatata aacttgatac ttttaggttt
      121 ctgtcagcac ttttggggtt ctgcatatgt tgttattttt tttttaattt ttatgttgcc
      181 attgttacta ctgtgttaaa ctacagattc agaatattaa acaagtacaa ttgttttaac
      241 tactgtgaaa ttgacagatg aagctgaaaa ccaaaagcac ctttcatggg attttaaaca
      301 ctattttcct ccatatgcca tcccaattat tatttagata ttacattcct aatttactgt
      361 taaggttgat tagaattcaa gcctctcaaa agcatgcacc aaaggtcttg ggctgtggaa
      421 aacattttta taaaataatc cattaatgca gaggagtgca actaaattag ttagcaattt
      481 gctgagcatg aattaatgaa cagagcttct cccagctccc agagttgtaa ttttcataat
      541 aacctcagac ctttatttgg caggttgttt agttttttcg tttgaaggtt ttcattagtc
      601 taatgaggac tgtgcaaggg cgagcagtca gcacaattta catggggaag ctatcataat
      661 aaatgaagca atttgaataa cacgcaaggg tttatgcaac aagataagaa gagattgtag
      721 agtgagattt agaggtaacc aatacattag accaactaat aactgaagta atcccaataa
      781 aaggcttaag tgaaaggaat gaaattaatg atatatacaa aactgtaatg atatgataca
      841 tgattcatta gattaataaa ataagtgttc aattgttttt agtgctttta gtccaagctt
      901 tgtttgtatc aggcacttta attaggattg ttcactggat cactttgctt agttaagttt
      961 tagaccatgg ctgcggtttt taatgatatt ttccctttct tatttaatct ttatagcc
//
LOCUS       KCKM01001048             591 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16639apa ultra-conserved element locus
            uce-3742, sequence.
ACCESSION   KCKM01001048
VERSION     KCKM01001048.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 591)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 591)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16639apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>591
                     /note="ultra-conserved element locus uce-3742"
BASE COUNT          169 a          109 c          153 g          160 t
ORIGIN      
        1 agtagcccag agcatgggat gtctgaaggg ggagggattt aatgccataa ggaagcaagg
       61 tgctaggaga atattctgtc tcataggagt tcatgtccaa tttattggca ctgggctgct
      121 gtacaggtgt aacaaaccac cgctgaggag ggctggtaac ctcttcactc tgctgagggg
      181 agagcaagcc atttgtctgg gggacggttc tctcaccgtt gtaaaacctg gctgggggca
      241 ggttgttgac aaactgttct tggaagaacg gttgcacact gtatcgggca ccagggacaa
      301 tctggtggga tctaggagaa tccgtgggag atggagttaa tctgtcattt tctgaagctg
      361 tgtacatgct acaacataaa agagaaacac tgagcactgt tcttcacaat atgatagtaa
      421 gacaacaaca aaacaggaag aaactgaatt attttttaat tagaatcaca atgaggttta
      481 aatggacaac tacccatttt tgtctggctt aggaattgtt tggtttttct aaacctgtag
      541 aaaatcgcta gtattactgc tacaagtgtg cactattctc tgctagccaa c
//
LOCUS       KCKM01001049             930 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16655apa ultra-conserved element locus
            uce-6468, sequence.
ACCESSION   KCKM01001049
VERSION     KCKM01001049.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 930)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 930)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..930
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16655apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>930
                     /note="ultra-conserved element locus uce-6468"
BASE COUNT          276 a          214 c          179 g          261 t
ORIGIN      
        1 aacagggcaa catccatgca cagtcagggc ttcccgctca ctaacacagg caacagggca
       61 gctcgtttct tctcattcat ttcgctggca gaacaaaaac gacggcacgt tagcaaccga
      121 ctcgggcact ggaattaatc agactcaagt ttgccttccc ttaaatcaca gggtcacgcg
      181 aaggtgggag agaagaattt gcagttgcgt ctttgcggga ctgcattcct aattctgccc
      241 gagtcctggc accttggatt gctgattatt acagtcacca acagacacac atacatattc
      301 aggaaaagtg ttcgaactct cacatttgta ttcattttac tttgacttga ctggaatcat
      361 aaaaggaatg cgtaaacgag gagagcctgt tgctgaaatg aagttgaatt ttttccccac
      421 agaaacttgg gttcatgaca gctttttgtt gggcaggaca ttagcctttt gtaatttatt
      481 gcttttagat taaatctggg gaaactcaat attgcagttg aatgattaga gcaatacccc
      541 ttggagtaat aaattttctt tggtgctgtg catctcccga tcatgtttcc cttctaatta
      601 catttacata aatgatattc tgcaaaatta aattaacatt caaaccgtta cgctggcaag
      661 gagagacaaa aattagttac aaacttacat ccctaaaaaa acccgaaatg acaccttgta
      721 ctttccacaa actgaatcac agctatcccc caaagcgtct cacacacaac cgattactct
      781 acttggttaa tcgctgaccc agacactccg ctccctcttt tggaagttta gagctcaaga
      841 ttgtgctttc cacagggtct cattcaatag aagcaattgg tgacaatcca aatttggtca
      901 gcaaagtgct atattcagac agggacctga
//
LOCUS       KCKM01001050             334 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16671apa ultra-conserved element locus
            uce-6407, sequence.
ACCESSION   KCKM01001050
VERSION     KCKM01001050.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 334)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 334)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16671apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>334
                     /note="ultra-conserved element locus uce-6407"
BASE COUNT          109 a           53 c           60 g          112 t
ORIGIN      
        1 aaggcaataa caagccttgg tggtttttca caccctctgt gttaagtgct ttcagaatga
       61 cagtgtaaac tgtgttggag aactccaagg aagtaaaact gattaaaatg ttcatgcttg
      121 aatggtgctg atggaatagt tcatttggac tttctgtacc tcctgcagct caagctgaaa
      181 tattaaaatt cagtggattt aaatctctct ccctcagctc aggaaaaaaa cattacattt
      241 taataggttt taaactcata attcattggt ttggagcagc actattaaat ctatttaaat
      301 attacttgta ttactaagga aatgatttaa atga
//
LOCUS       KCKM01001051             833 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16685apa ultra-conserved element locus
            uce-1304, sequence.
ACCESSION   KCKM01001051
VERSION     KCKM01001051.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 833)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 833)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..833
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16685apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>833
                     /note="ultra-conserved element locus uce-1304"
BASE COUNT          243 a          174 c          204 g          212 t
ORIGIN      
        1 aaaaaaaata tttacagact gacaggctaa tggacacttt caaaaagagc ggttagaaag
       61 aagtagtaaa tgggcctgtg ctgatgcagg gcagcgagcc cggtcaggga tcaagacatg
      121 tgacaccata tcggataaca tctaattggc gggtcacatc caaatgagtg tagtcgtgca
      181 tcatctggaa ggcttttgcc ggttataaag acacttgtaa acaattcagc cgccgaacac
      241 ggcaataata tgttgatccg gcatgtaatg aggtgttcct ggaatcaata aactagtcat
      301 gaagagcagg gagcaaggtc agcgcctgcc tttttgatga cctttcctgg ctgctaagga
      361 catcatatac tctgaagagg acttttctca tattgcagaa ggcaccgagt gtcagaactt
      421 ccattcgcag caagcaaatg aacagccggg ctctgcatgc taatgaagtc caagctattt
      481 tccacctttt catctgcaca ttatgctctt gactttggag aaggtgggaa ttaggttgga
      541 ccctcgtgtc agactgcctg atggctcggc tccggaaaac tggtaattga agctgatgac
      601 tgatgcggag gaggcctgaa tttggaaata aacagtttca agcactgcat gtcatttcta
      661 gagagactgc tgagtgaatg gaaatgagct ctgtttctcc tgtctaatgc agtttctcag
      721 caggaaaaac accgtctttg agacaacaat gccagtcatt aaggtttaaa tgttccagcg
      781 ataatgtaag gaatagcacc tgccttccta cacggcactt atggaaatgc tgc
//
LOCUS       KCKM01001052            1193 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16701apa ultra-conserved element locus
            uce-3198, sequence.
ACCESSION   KCKM01001052
VERSION     KCKM01001052.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1193)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1193)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1193
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16701apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1193
                     /note="ultra-conserved element locus uce-3198"
BASE COUNT          323 a          255 c          228 g          387 t
ORIGIN      
        1 taatgccttg gaattttttt tgtaatgtct ttctcagcac atatctttat ttacggtttt
       61 cttgtttatt tctctgcacc ttgctgtaca aacctggctt ctttacattc agtagccatc
      121 accatgatct atctgatcta gacagctgtg ccgagacagg ggattttgaa atattactgt
      181 aaaaaactgt aagctttttg ccacacttgt attcatttta gtggttatca ctgtaacagt
      241 taacaaaaga cacaaagaca tccataccca aaacacaaca tatgaagatt taattttttt
      301 tttcaaatgg cacatacatc taaatagctc ctacttttcc catttggcaa agccattgtt
      361 gtggctaatg tatgtatttc tgaaaacaat gatacatttc caatagtatc ttccacgatt
      421 ttttttcaat gagcaataaa ggaggttgag gtgggatgtg ttttatccca ccacattata
      481 tcattcctct ttttcctctt tgttggatgg caatcaggaa ccctcatgcc aagcttggga
      541 agcaacagca tctggctcct tggcagattc tgcaggcggt cttgttgcca gcctttaagc
      601 tgtgtctggg tctgctgcat ggtttggctg cagatgggct ctctgggttg ccttgtgctt
      661 atgggtgcca gttttggctt acctttgatt ctgaggactt tactcatttt tattcatttg
      721 tgaataagga cccatccaaa tgcttcatga aaccagtacc agagtgtacc aatatttaaa
      781 atgaaaaggg aaggaggctg tttcccttcc ccctcccctc cccaggatga aacattataa
      841 tagcatctgc aaatggatct ggatctatca gtatttccat tataaatcag aggcttagag
      901 cttagccatg aatattcctc ccagaatgaa atggaatgct gccgctggta acaaaacagt
      961 actgaaggtt ttttcagaac acctaggtat tcccacactt gctttccctt ccttcaaggt
     1021 ggatcatttt gaagatgtga caatttaaca tcgagcagat gcccaaaaac atctgcagga
     1081 gaaaacaatg cttcgttctg atgttcctgg acactgaggt tcaatacagc tttagagcca
     1141 cttaccagta cagtgcctag gcctgaagaa aagctttgaa atcagagcct tgg
//
LOCUS       KCKM01001053             994 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16717apa ultra-conserved element locus
            uce-3565, sequence.
ACCESSION   KCKM01001053
VERSION     KCKM01001053.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 994)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 994)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..994
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16717apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>994
                     /note="ultra-conserved element locus uce-3565"
BASE COUNT          307 a          208 c          195 g          284 t
ORIGIN      
        1 tttggaaagt tttctactgg tacctaattt ctaagaaaac cagtaaactt gtgatgtaaa
       61 tgtgtgtaac gctatcagag caaagtcctt tagtaacaaa tccagacagc acattcaaca
      121 aatagaattt ctacgttgta tctacgcctg agcagcatag aaaatggtta ttctgacaat
      181 cagctccgtt tgctctggcc gcagccaaca tgctcagcaa tgcacagatt gtgtgacaaa
      241 cagcattgat ttagtaatca caaaagccaa tttctatatg aggaagcttc agcctgactt
      301 acaaggtgct gagtgaaaac ttaccgcttc cacagacaga ctgaaccctg tcgggcagga
      361 tgctggggaa atcgtaagcg gtttgattat aaaactgagg cagtggagac ctgccaggtc
      421 agccatctgt caaaaccaaa agggctctgc ttttccacta ttctaggagc tgtacaaaca
      481 tcagtgacaa ggaaacaaaa tggaacctgc gttgtacaaa caggaacttt ttgaagtatt
      541 tctactttga atttcttccg tgtttgcaca gttgggaatt tttttgcccc ttctttgatt
      601 gtactgacat ttgtttcctg tgaagtgcac aaaaacttta ctgaccttag gtctattgct
      661 taaagtattt catcgcctaa tctttttagg attttgacaa tactaacaag cacacatgtg
      721 taagagacgg tctttccaaa gtcctgggaa ctgaagtaat aaagagcaca acagtacgct
      781 cgttcctgtt ccacgtcctc tcaaagcaca gcttcaatgc aggaagtatc aaaactgtta
      841 gaaataacac ccatcggaca agtatctact gagtgagtac tctgtggccc gatacagcaa
      901 atccattcgt tccagagaga gatcattttt caaagatttt tatgatcgca atctaaatta
      961 acttgctaaa actgcattgg agacttcaga gtta
//
LOCUS       KCKM01001054             653 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16733apa ultra-conserved element locus
            uce-1191, sequence.
ACCESSION   KCKM01001054
VERSION     KCKM01001054.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 653)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 653)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..653
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16733apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>653
                     /note="ultra-conserved element locus uce-1191"
BASE COUNT          209 a          121 c          123 g          200 t
ORIGIN      
        1 ttttttgaga catacaacac acactgcatt ttactctttt taaaataacg tctggaaaac
       61 agggaagctt cttttgaagg attgcattac agctttgatt tttatttata aaacataaaa
      121 gactaatata tatcagtctg gacattttgc ttccaaagtg cattgtagca aaataattgg
      181 aaggcagttg tggtgtgaaa tatatgacag ctctacagga cataaaaagc agctttttct
      241 ttgtaatagt gtaattgcct taaaccccac aatcataatt gttatcaaaa aataatccca
      301 aggaaaggct aatataaggt gagcagacta ttataagagc tctaatacac tcaattcctt
      361 gaacggcaaa tgcagcccct caatctccca gtgcttttag tgtcagtcag agagcactca
      421 gtcatttctg tgcatcaagc ctgcagtatt gatttttcca ctgactgaaa cagccatata
      481 agcataaatt ttgcatgagg ctttcacttt gtagactctc ctttggtcag atgacacatg
      541 atgtgaacat gaagactgta taataacaat gcatggtcaa cctgcaggca ttaaagtgtg
      601 gtctctcaca gctttgaagg acagaagctg gagtggtgca tctctggtgt gat
//
LOCUS       KCKM01001055            1015 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16747apa ultra-conserved element locus
            uce-3104, sequence.
ACCESSION   KCKM01001055
VERSION     KCKM01001055.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1015)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1015)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1015
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16747apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1015
                     /note="ultra-conserved element locus uce-3104"
BASE COUNT          299 a          237 c          186 g          293 t
ORIGIN      
        1 cttcctgaca catacatcca gattttattt tttttatatt tttgtagttg tcaacggctg
       61 aactgctctg caatggttta aacctcggta acgggtttcg tatggtcact ataacatctc
      121 agtgtattaa ttagttttca agacccccaa gcaataaaaa tgtagccatt caaggtcaca
      181 gtttgactta tttacaattg atggataact tggcaaactc tgcattcagc tacctcatac
      241 aatagaaaat atattgtcat tcaggttaac aaaagcctct tttctttgcc acctcactac
      301 aatggccctg caaatgaaca tcgcctgaat aaaatcctaa ccacattttc actctcatta
      361 accacagtag ggtatcacac aatttgcctg gctcctactt agaccactgt gcaccatttt
      421 actagcagca gtttgatagg ttttatggca ggtgatatat ggagtgggag tttcgggagt
      481 cgtaaacaga agccacagtg tatcacaatg tggtttaggg atataatgac tgtgttgtaa
      541 agcaaaggat gacaatactg cactaggctt gaggtagcga accaacagac caaacagctc
      601 aacataattc acgctacaaa cagaggatcc taggtgtgtg ctggctttcc tatatctttc
      661 attaattacc cctgatgaat ttgaatacga actactaaaa ccaaaataaa tctgtgacca
      721 agagaaaaat tacagatcat ctccttgtat ttcttggaag aagttcctct cccccagtgc
      781 acatacacac gtcccatatt accagttctt aaccagcctt ttgtatctcc aactagacat
      841 tccctttgct tctggggctg ccatcgctca ttaacacacc agaacaaaca ccggctggga
      901 gttcttttgc acacgtgcag gggggcaggt gatgccctta gctactgcga aagctgggct
      961 ggatgccacg cttaacagaa agccatgaac cacactgccc cttagttcat attta
//
LOCUS       KCKM01001056            1019 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16763apa ultra-conserved element locus
            uce-5773, sequence.
ACCESSION   KCKM01001056
VERSION     KCKM01001056.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1019)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1019)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1019
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16763apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1019
                     /note="ultra-conserved element locus uce-5773"
BASE COUNT          264 a          229 c          210 g          316 t
ORIGIN      
        1 cattcactat aacaaaatta aattcccatc atctgacaag aagctgagtt tggcagtagt
       61 tcgggatttt tttgtgtgtt ggagatatag cagaggctgc cctctgtacc ccttgatttt
      121 ccccgcagcg ttgagctggc cagccctgag aggcagggac ccgaatttgc gggggagatg
      181 gagaagggca gctgagccct gcgtggtgtc acacaagctc ggggacatcg ttttccccct
      241 ttgccaggga agtgtgggtt accctcatcc tccctccaat ttctgtggtt ttgtaacaac
      301 gcggtaacgt ccagaatggc attccacaac tatgccatct cgctaaccgg ctgaggcaca
      361 atagttcagt aatgtaatat aaaaagtaat ggtgttagct aacacatcct taataagata
      421 ttgtccgctg ctctgccata tgctaccgag caggctttcc ctctgtgggg cttttgagtt
      481 ctctcaataa gattatttca aatactctaa tcctgaatca ttgacatgaa tacaaaagcc
      541 tagtgacatc taatagatgc ctcttagctt tgcttttcct cttgttcctt tcctttttct
      601 tctcttttta cctgacaaaa agcttacaga cacttgggct ctgtctctca gtaccagcat
      661 gtgggtcccc tcatgaaata taaaggagga aaaagggctg acatagggct gataagccac
      721 agagcaaagg accatagatt aaaagtaaat gccactaaat cctaccctgt acactcagtt
      781 gttcttttat tgttttcttt aactcttcca gtgccacgct aggctagaaa gagatgaaaa
      841 atgttttttt aaaaaaaggc agtgctactg tgtcatagtg ccagggtcct aaaggtttgc
      901 tgtacatttg gattttctct tggctctctt ctcaccttga ctttctaatc agagttgcaa
      961 actgtttcag ctaatcacat cattcaatta gcttgaatgt ttagattatt ttttcaatg
//
LOCUS       KCKM01001057             955 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16777apa ultra-conserved element locus
            uce-3416, sequence.
ACCESSION   KCKM01001057
VERSION     KCKM01001057.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 955)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 955)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..955
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16777apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>955
                     /note="ultra-conserved element locus uce-3416"
BASE COUNT          357 a          165 c          147 g          286 t
ORIGIN      
        1 acattatcca atcaacacaa cacaaactga tttccataag aaattctagc ctcatcatga
       61 aaccttggtg ttaatttaaa aaaaatagtc cttgattttg aaataaagtt gaaagtatag
      121 tgtcagaaca aagtgaaaaa ggtatcatta gccttcaaat gtgacaaata agaaagacac
      181 aaacaagtgt caggataatt aaaaaggcat tgttcacttt ttagaagaaa aaatgaattg
      241 cacaagaaat attaagctaa caaagaaaga gcaaatatga gtagaaaaaa tgacagttat
      301 ctgcaaaatt cataaatgtg tcttttgtac aaccgtaatg atcatatttt atgctgtcat
      361 tttacattta attgctcacc ctggtacttt acttcataga agccatcagt accccacaga
      421 gccagatgct gaattgcaaa aaaacatact gtgaccacag acttacaggg aagtaacttt
      481 gctgagctgt ggtgtatgac aagttaattt ttgcaattat actttttcca agaataaatg
      541 aaactgcagg tcattactat tctatatcat taaaaagagg cagaaaatgt tcttgatcat
      601 aaaggcctca aactcatttt atcattactt tgacatatga aagcaacttt tcaagctgct
      661 tttcctcaat gtgacttaat gaaataagca ccacctcagc tgaaatacgt aaacatcttg
      721 atatattaaa aagcacataa ctagccaata ttgttattat tacacaaggc taacccatca
      781 tatgtctagc aggaaagaaa tgtcatatgg gctatgctta ctcacagcta ttagctttgc
      841 tgtattacac cacatgtaaa actactgaaa agatgtgatt gctcagttgt catgcagact
      901 gaaatcgtcc ttcatttatc ttgctatgag acattaagtg tcagaaatgt tttca
//
LOCUS       KCKM01001058             929 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16793apa ultra-conserved element locus
            uce-408, sequence.
ACCESSION   KCKM01001058
VERSION     KCKM01001058.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 929)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 929)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..929
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16793apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>929
                     /note="ultra-conserved element locus uce-408"
BASE COUNT          227 a          190 c          240 g          272 t
ORIGIN      
        1 ttgtgctcgg tgctttgcat gagcaggtga agaaagccct cgctcgatct ttactcagca
       61 gagggagact tgggcaccca gaccattagt atttatggcg ctgttggcca gtggggattg
      121 aattccggaa gctggctgga atcggaaagc tttcgttttt cctttttttt aatgaaagag
      181 agggagcttt aattgtcttt gtgtgtaaat ccgttctgtt gggctttgtg aggaggtttt
      241 tattatcttt cactagtaag agttaagaag ctttcaaaat attaaccagt cgctgaaggt
      301 tctttgaaga aaaatatgac tgctcgtgta aacaattaat ggttgttaag catggcagtg
      361 tatattatga caaacaacac atgctacatt atgccagctg gtgtaatgat gtgataatgt
      421 ctgactcatt aactctggca cacagtttac gatgcccttc tatgacagga ttaattgatt
      481 cacacataca ttaaaacaaa aataactaaa ctgaaattca gctggaagcc tggcttctca
      541 tttgtcatca gccctgttgg tggttcaggc cagtttgggc gcggtgcaga gcgcggtgag
      601 cttcgtccac gaccttcgtt tcggctaact ccatcagcat cttgagaaga gggccgttcc
      661 tcgagcagcc atttggcaga agggtcctcg cagtggcttt tagtgccgct ggggctgttg
      721 gatcaaatgg ggaggtaggc aggtgaaaat atcccagaat gccagagtca tttttgcctg
      781 agtaagcgtg ttgtttgctg cctctgtgga gcaagagcca cttcgccatc tctgtgtgag
      841 aggagtggtg agctgttacc tggctactcg gggatctttc ctcaaaccag gccttaaacc
      901 acaggaaatt cctcaacgcg ctctctgag
//
LOCUS       KCKM01001059             889 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16809apa ultra-conserved element locus
            uce-2471, sequence.
ACCESSION   KCKM01001059
VERSION     KCKM01001059.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 889)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 889)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..889
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16809apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>889
                     /note="ultra-conserved element locus uce-2471"
BASE COUNT          266 a          150 c          182 g          291 t
ORIGIN      
        1 aataactatt tttagctttc catttaactg tagtaatgtc acctatggat gatttcttct
       61 agcaaattag atttcagtta ataagacaca ttaaattcat ttacatgaaa ctattaacta
      121 gggattttta acttgttcct tcttgggtgc tctttgacat cttttgtttg ttccatcaga
      181 gccactttga attagaatgc atgtggtgct ccttgaaatg tgtgataaaa agcacctgac
      241 catttcaaga ggttaagtgg ccatgatctc tgtgctgtct gcacggcagc tgacaagaag
      301 gtgcagtttg acacaatatc taagttgctg tgacattgca agttttaagt gacgttcaag
      361 gagttggaag tgctagctct gtatatatcc caacgtgtgc tggtcttctg tctgttaact
      421 tgctaatgaa ccatgattga gtaaagtaat gaagagttta cagagagccc caggaaacca
      481 atttccaatt ttgcaaccag caggctttaa cttcactgca gcttttgcta attttgtcta
      541 gaaggggact tggatactaa atgccatttc tgctttgtga atcagacaga cttttctaat
      601 ccccgaatac ttacttgcta atgaatgtct cttcttcaga tccattttat ttccatctgt
      661 agttgttaaa aataggctga aaaaaatgat tactgagaga aatgaaatta taatcactga
      721 aaatcagagg aactgttagg cttatggaga gaaggcgatt ttaatcttca gtgtgacctg
      781 ggatgaacca cggagcgtaa gtgaaatgca gaaggttaat tttaagagga acaactaaaa
      841 gtcaatgtga aagtcctttg tacgtgatgt ctgtatgcaa ctgtaagga
//
LOCUS       KCKM01001060             859 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16824apa ultra-conserved element locus
            uce-1919, sequence.
ACCESSION   KCKM01001060
VERSION     KCKM01001060.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 859)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 859)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..859
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16824apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>859
                     /note="ultra-conserved element locus uce-1919"
BASE COUNT          275 a          159 c          133 g          292 t
ORIGIN      
        1 aaaaagtatt attttaatac gattcttttt cagcctatta agttccccag tatcacaatg
       61 aagtctgcta aaagttagta aataaaggct ttcaggagag ctttattaaa tcactcatga
      121 cttatcaagt taaaaccccc actcagatat cttaataaaa cttccagaga atatatttaa
      181 ttttcctgga aatcaggagc caattactaa ctacaggagt tactgtcggc aacgctgctg
      241 atcagctttc tgtaaataga gtatttacca acaacttgaa ttagttctcc aaagtttcgg
      301 tttctgaagg tcaaataact atgtaactgc ttaataaaga agcaaagaag tacctctaaa
      361 tatctccaag ctctgatggg cttatattct gctccttagg tgaggtatta gcaaagctta
      421 tttattttca tttccaaggc ttttatttgc tcattccctt gtggtaaagc tgatttccat
      481 gatgattccc ttcttaattt taataccctt tttactcatc atatagacat aagaattttc
      541 cataaaataa tgaaacccgt ccaaaggaaa tgaagacaac taggggagga aagtaagcta
      601 cagcttactt tttctctttt ctttttcaat taattgatcc actgtcatat gtatatatga
      661 aagatttttt ttaatgaaag gaaaataagg ttaattaaca taaaacccct cactccttga
      721 gatgttgaat tttgtatttt atccatgctg ccttaagtgc cttgatttcc cagtaatgac
      781 ctagttctcc taatgagtaa cattaacccc tggctgtagc tgtccaggac ttaattgtca
      841 actggagctg aaataggag
//
LOCUS       KCKM01001061             363 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16839apa ultra-conserved element locus
            uce-7704, sequence.
ACCESSION   KCKM01001061
VERSION     KCKM01001061.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 363)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 363)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16839apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>363
                     /note="ultra-conserved element locus uce-7704"
BASE COUNT          115 a           66 c           78 g          104 t
ORIGIN      
        1 aatgggtatt atctaaactt ccagtgaatc acagctgaca gtgttgctat ttctaggcca
       61 gagaatggct ctttgaacaa aatgcaatcg ctgtgtcttt tcaacctgcg cttcagcaga
      121 gtgaagcagc aggattcccg tactgtataa taactgtcag aaacaatttc tgctctgtaa
      181 gtgaggtgaa gcaaaatgtc aaaatatttg aatacatttc attgaggata tcttctttta
      241 aattagtgaa ggctagagga agagaatcct attctctagc acaataaata tgcatggaac
      301 agcggggcca agcgaattct aataaagctg ggtccttgct cgttaatgtg ttagagaacc
      361 aca
//
LOCUS       KCKM01001062             388 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16854apa ultra-conserved element locus
            uce-2510, sequence.
ACCESSION   KCKM01001062
VERSION     KCKM01001062.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 388)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 388)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16854apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>388
                     /note="ultra-conserved element locus uce-2510"
BASE COUNT          125 a           77 c           65 g          121 t
ORIGIN      
        1 aaaaatgcca aaaatctcca gatcaaatgt ttttccatgt gtagaatctg atatttttct
       61 tccagttctg tattccattc ctgtagaaac tttaagattc tttaaaagta tgttcaaaat
      121 taggtgaagg gtaaaattac gaatttccca cttggaagaa agtggcttaa attctatcca
      181 attatttgcc atggcaacca gctaaacaca aaagggctgg gatggatgta gagtactgcc
      241 tctataatca tcactgtatg tccttcaaat catggatatg cagcaccact atcccaatct
      301 acttcagggc cataagccta cacggtaatt atatgctttg caacactcca cttaagtgca
      361 tcaataatat agtgagtgaa cgtgttct
//
LOCUS       KCKM01001063             910 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16870apa ultra-conserved element locus
            uce-7831, sequence.
ACCESSION   KCKM01001063
VERSION     KCKM01001063.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 910)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 910)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..910
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16870apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>910
                     /note="ultra-conserved element locus uce-7831"
BASE COUNT          228 a          198 c          174 g          310 t
ORIGIN      
        1 ttttttcttt cctgtttttc tccttttttt ctccatgttt tttttcccct gaagtgcttc
       61 tggattgcat ctttgcatat gaattctcag cctaaagcta attgttactg ttcatgaatt
      121 ataaactgct ttaaaatagg gttataaagg aaattctgtc acattcttga atacagtagc
      181 gcaagcttgc ttttctggta ccaaaataaa ccatattttc ccccttaaat aagttctatt
      241 aagtcatcca cagctttcaa atcctcatgc atttctttca tgattcccct gtggagttat
      301 ccttgttgtt ttgaaaagga tagtctcgag tctgagcctg tacttccaag tcctgctctt
      361 tgttgcctaa ggagtataca aaggtttaga ttgcatcttt tcaatgcatt atggcactgc
      421 agcctaaagc caatacttgt tttttaactg gcaacctgcc tgtacgaatg gaggaagcag
      481 attgcctctt tgctgaacac ttagacaagg tactgattta acaacagtgg acaagcagct
      541 gggagctggg ctgtcagcct gtcacacact gacaaatctg ttgttcatat tcaggcagga
      601 tgctgcagtt agattgccat cagtatcatc catctaccac aggcatgcga ggcggaccgg
      661 cgtctcctgc atacccatag atgaaataat gctggtgata cagctttcca ggggaatctc
      721 aagaaaacac ctaatttgcc tttttttttt ttcgcgtggt ctcctgcaat aagaccgaga
      781 aggcagcaga ttcaattttt gcctctctct ttgttctctc atttggtatg ctggaattat
      841 gcgtgcaaat tgttggttac tccaatttca tgtctcaggc atgaaaggaa atctctgaat
      901 ggagccttac
//
LOCUS       KCKM01001064             541 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16885apa ultra-conserved element locus
            uce-6613, sequence.
ACCESSION   KCKM01001064
VERSION     KCKM01001064.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 541)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 541)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..541
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16885apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>541
                     /note="ultra-conserved element locus uce-6613"
BASE COUNT          178 a           98 c          100 g          165 t
ORIGIN      
        1 ttttaattat ttcaatgtag gatcttaatt agaattattt aaggttggta aatacatcac
       61 tgttccgaag aaccaacatc atcccaagga tatatgtgct tgttattcgc caaaaggcaa
      121 gaaagtttca cagggacaaa aaaacaaacc aaaaacccca caacacacct caaacaatgt
      181 atttatggaa ataaatagtg agtggaatag gttttcgtgg cgtgagagtc aaatggagtt
      241 tttaattgac tccacgaggc gctggatcag gcctgtgggg tgtttggtgc tcagttacaa
      301 gttagtgctc tctctaatca ccttgttctc taaaggaaat agatactaaa caggaaccat
      361 ctggtaatac attctgtacc tcttaattac aatgttttga gtggcaccta aataaatttc
      421 atttacaagc acatgactgc ttgtcaaaag ctctgttgat aattttatta ttgtagtata
      481 ccttctcgct taatgaccct ggcccagtaa agtcaggaat atttagctct atggcaaaaa
      541 a
//
LOCUS       KCKM01001065             339 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16901apa ultra-conserved element locus
            uce-4167, sequence.
ACCESSION   KCKM01001065
VERSION     KCKM01001065.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 339)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 339)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16901apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>339
                     /note="ultra-conserved element locus uce-4167"
BASE COUNT          122 a           54 c           53 g          110 t
ORIGIN      
        1 tggaaagtac aaaaatcaac tcaaatatct tcagaaataa tttaaatctc atgtcactgc
       61 tgactgacag ctctaataaa ttcctacatt ttaagcagac ttacatttca catgcatttg
      121 ctctccactg ctgagcagag tggaacatct attgtcaaat gcataaaata acattagaaa
      181 tgcaaactta atgtagccaa tggtaatgtg ttatttaaaa cttatgagcc tgaataaggg
      241 cttattttct ccaaattgaa atttatagtt tcattttaaa gtgctaactt gaatattgat
      301 gggctttagg catgctgtta taaaatggga atgaaaaac
//
LOCUS       KCKM01001066             323 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16916apa ultra-conserved element locus
            uce-7793, sequence.
ACCESSION   KCKM01001066
VERSION     KCKM01001066.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 323)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 323)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16916apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>323
                     /note="ultra-conserved element locus uce-7793"
BASE COUNT           86 a           57 c           67 g          113 t
ORIGIN      
        1 tatttcttta tatatatatt tatggaacct ttccctctgg tttagacctc tcagactaat
       61 ttaatttttt tgggtgtctg aatgtcgtcc tgcccttgac actagtggtg gtgagtcttt
      121 gtgccttgtt gtgctttctt ccctctcaaa agcagagaat ggtttcgtgt attcaaagca
      181 taaatgcagc tgcccatgag actgtctgga tgaagactag ataagagagt tacattaggg
      241 cagaaattcg ggtcacatca tatcaaactg aaagcatcag gccaaagata ggtttggcta
      301 ataatattta tacatgattg ttt
//
LOCUS       KCKM01001067             633 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16932apa ultra-conserved element locus
            uce-3309, sequence.
ACCESSION   KCKM01001067
VERSION     KCKM01001067.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 633)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 633)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16932apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>633
                     /note="ultra-conserved element locus uce-3309"
BASE COUNT          222 a          110 c          103 g          198 t
ORIGIN      
        1 ttgaagggaa atattttaga ttttgatcaa aacctcattt acattcttac aaagaaactt
       61 ctaagagtta taaatgagct gtagagtaaa ttataaaaca cgtgtttaaa gcaacacatg
      121 cccagagatg gataacatta aaataaaagt aggtgtaaaa tccaagatga acatttctgt
      181 tgagcagaga tcacgcgaga aagcattcca caggcataac tttgcagata atcaaagcca
      241 agtattaata catttttatc agtccacctt ctgaacaata tttcagtaga tttcctttca
      301 cacagcgata tttgtaataa atgttctgcc tttgttttaa agtcagtccg tagaaagatg
      361 acatcagctt agcaaacaat aaagtgcctg taatattgtc tccagagggc tgttacattt
      421 actttgtagc agtaaaattc aattttcaaa aaacactaca tgaatgatgt taggttatta
      481 accctatcac cgctgtaaaa catcatcatt gtgtgcagaa tgtaggtcac tatctaggag
      541 ctacaagttg ctttttgtta aataatccat ttaagctgct tttctttcct atagcccggg
      601 ttgtgtcctt tccctctgaa aagaaaaaaa aaa
//
LOCUS       KCKM01001068            1118 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16947apa ultra-conserved element locus
            uce-1490, sequence.
ACCESSION   KCKM01001068
VERSION     KCKM01001068.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1118)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1118)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1118
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16947apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1118
                     /note="ultra-conserved element locus uce-1490"
BASE COUNT          321 a          191 c          225 g          381 t
ORIGIN      
        1 ttttccttcc tcattactac ttagcctaaa gatcttagga atctggtttt gtttcattat
       61 tgatttattt ctgagaaata tcttgtcttt gcctagtact aaaataataa tttcctttca
      121 gtttataact gggataaaag gaaattatct accaattctg tgaaactact tctgtgcctg
      181 tatctttcat tctctatgtg atgctttagt tctggaaatt aatataacag atactcctca
      241 aagagtctta gaaaggagga gaaaaaggtg ttttatagtg gaatcaagca tcagctggat
      301 actttagttg tctttatcct tttaagttgt cttaatccgt ttagcaagtg caataaacca
      361 gagaataact aggaaggcat ttagtgcatt acacaaaggg tgtgtggttt agaccttttc
      421 tggaacgcag gctgcagttt agctgtcgag gcactatcat tctcctcaaa ggtgaaatga
      481 tttagaggcc tagagaaact taatttttct tgatcaccat gtgcaacctg gaattttaat
      541 ggcaggcata attaattctt ctgatgttaa tcatcagggc tgggctccac aattatcagc
      601 ctagtgcagc tggggcatgg tgcagacatg aaaaattagg aaaatgaatc agtaataggg
      661 tggcagattt aatctgcatc atgaaaacaa agttaaaaag agggagatcg agagaatttc
      721 agctgaagct tttgtgccaa tgagcactga cagaactgaa aaatgttgcc gatgtccaaa
      781 gtgattggta attaccaagc cattgaattt tttattgtca atttatcatt gcgccagagg
      841 ttaaatttaa catcttcttc taaagccatc actctaggag gaaggcaagc tttgcatcac
      901 gtggcccagg agtcagtgaa aggttaatca ggtattcctt tagtttgtgt gtgcttccaa
      961 atcagccttt ctttttgtgt ccttttatgc tacgtatgta ccgtggggta ttttctaatt
     1021 tatattgcct gtacatttca gaaaaatgta agattgcatt ccgcagcatg gcatcatctg
     1081 ccttgctgtg tatttattgt gctgtatttt catacttc
//
LOCUS       KCKM01001069             995 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16961apa ultra-conserved element locus
            uce-1480, sequence.
ACCESSION   KCKM01001069
VERSION     KCKM01001069.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 995)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 995)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..995
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16961apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>995
                     /note="ultra-conserved element locus uce-1480"
BASE COUNT          297 a          217 c          176 g          305 t
ORIGIN      
        1 gatgctaaaa gtcttatttc aggagaagca gtttctctat ttcatatgct tctttctgtc
       61 atcattaggt atcttttatt tttttcctta ttgctgaaaa taaaaagtta cttctgctga
      121 cattaaaagc tcgattttac aaactattta atgcactcta aggatactgt taaaagacat
      181 tggcatgttg atgtgagccg tacaaaggtc agtgatttgg aggctctttc agacaatttg
      241 ccaggatttt ggcattttgt aagcacacat aggacagctc tccagcaagc tgaccttgac
      301 agtgaattgg ataaataaac cttcaattta ccccctccag ctcgatccta gcccagctga
      361 tccctctgga gccttcacct gtccgtatcg ttcaactgcc tgcaactttc aactgacgaa
      421 catccacagc tttacaggtt ctgtgacaaa caccatctaa cagataaggc ttctgaaaag
      481 tcaaagtcaa tagtgtttcc attgaaaatt taatgctgct tccatcttta cccatcattc
      541 ttcctactgt tgcatgtatc ccaggaggca cttcaagcaa aagcactagt ccataacagg
      601 taatgacgtg gcatttaatg atactgtcca aagtgatcca agcccatgga aagtaatgtg
      661 cactcatgta ccagataagc acagctgaat gtactagaac agcagtatct ctcactgcac
      721 tgtcactaga tacaatgtga catatgctct gccattgtac ctggcttttc cttttacttc
      781 accatcagag gaaaagagca ttttcagata cagagcacca aagtgttaag ggaattcagt
      841 aaaaggtagg atggcaacat atccttaatt aagtattcac agcctcttta atacttcagt
      901 gctcttggat tcgctactaa aatctgtgaa ttatacctca ttgaagaatg tccttaatcg
      961 actctgacat gttttattgg aggcagaaaa aatgt
//
LOCUS       KCKM01001070             910 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16976apa ultra-conserved element locus
            uce-5273, sequence.
ACCESSION   KCKM01001070
VERSION     KCKM01001070.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 910)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 910)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..910
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16976apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>910
                     /note="ultra-conserved element locus uce-5273"
BASE COUNT          270 a          202 c          177 g          261 t
ORIGIN      
        1 ttttttgcca tataggctgg ctagagcttt tggagcagta gtagaagtag gttttaaggg
       61 gggccctaca ggcaaatatc ttaattagct gttaccaaaa cctctgagcc atatggccac
      121 cataaaaagg ggactttaat acactgttcc attttatgtc atcagttgca agctatggat
      181 tcactctcac ccccagtaac tcacgattgt gcagaagaaa acctctgaag tgaaaacata
      241 gaccatctgt tagtgatacg ggtaagccat gtattctcta catacatata tacatttcct
      301 gcattgcata tgatttcaaa tatttgctct tggaactgca aggtgtccta ctgtcataac
      361 agtcaagtta ttcattaagc tgtcagcacc ttagcgtatt gctcccacac agggtccatt
      421 tctgattttt ccattccccc tcggagaacc cactcactca tcaccaagtg cggttactct
      481 cataacgggt gcaactgaga tcctcatgtc aacatatgta aaccaaatct atacctttct
      541 attgcgacgg ttccaactcc tgaatttccg agggcactaa tggattttga gggccagcct
      601 gaatttgcaa gagttttgtt catatcaatg tgatgcagtt cttggcacag acttctgagt
      661 cggtgccgtg aagtattaaa agctgagaag tagagcaaac aagtatcaac caaaagaaaa
      721 ctatgattga tttcaaacct ccgtgttttg aaatgaagct aagcagacag tttacaatag
      781 caaagccaag gcaccaaagc tctacagatc tttgcctaaa acccagctat tgtgctaaac
      841 ctgagctatt ggctgcccac cttcagaaga aaggtagttt ttgtttatta ccactcgagt
      901 ggaagaaata
//
LOCUS       KCKM01001071             607 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 16991apa ultra-conserved element locus
            uce-4138, sequence.
ACCESSION   KCKM01001071
VERSION     KCKM01001071.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 607)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 607)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16991apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>607
                     /note="ultra-conserved element locus uce-4138"
BASE COUNT          206 a           96 c           96 g          209 t
ORIGIN      
        1 ataacaatgc cgaaataaat taaaaactaa attggaactt tggcattttt acttaaatgt
       61 agtacatgaa atgaagacat tgcatgactg ctcattttaa tgtaacatcc attttgattc
      121 ttcatcacgc tgtacatctg cctgctttcc ccagctatct catgttctgt agcatttgta
      181 ttgtgctcct gaggatgctt tattggtgaa ctacattaaa ttcatctaga aagaacttta
      241 aaaaaaagcc ttttcatatg cccttaggat tacttggcta gacttgaatc aatttatgca
      301 tttgatggtt agtttcagtt gtcatggata aacaaaaggg taactgtcta gaatatatca
      361 aatattgttt cattttgaaa tgtatgtttc cagctataca catctcctac cctgttttgt
      421 aaaagtattc tgctgataaa atgtagactt atgtttgaca gctttttaat caagttcaaa
      481 gagaataaat aaaactaatc cagtgtggta aagagtctgc ctggttatcg atttgttcat
      541 aaaatgaaaa ataaaccatg taaataagat atgtgaaaca cagatctcga agcaaatatt
      601 taaagca
//
LOCUS       KCKM01001072             615 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17007apa ultra-conserved element locus
            uce-6356, sequence.
ACCESSION   KCKM01001072
VERSION     KCKM01001072.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 615)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 615)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17007apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>615
                     /note="ultra-conserved element locus uce-6356"
BASE COUNT          197 a          126 c          108 g          184 t
ORIGIN      
        1 cccccgactg ctattaactc ggttaaaatg tgtatgacca tggaataagc atggagcatg
       61 gatgagtagg agagagggag gacctcaggg ccaggcggtt tacaaacagg catcacagcc
      121 atgctgtcct ttgccccctc ttacatttct tattacagta cattaaaacc ctttgctctg
      181 tcaaattgac aaaggcagct ataaaagggg tcctttctaa tacacagtaa tataaactat
      241 gtttgtacac ttaccacata atccctaatt acttccatac ttttatgtgt ggagagcttt
      301 gacgcttgca ttgctggata cttagtgaat gaaataaaaa tcagaaatta tttcagcata
      361 agtacagggt agtatgtggt atgtggatta gcttctaggc tggcgacaca gctcacattt
      421 cagaataaat atactaagtg tcattgatcc actaagtgtc aaataaaaaa ctatgacacc
      481 aacaaaactc tcatatgacc ctgacattcc tccagtactt aaagcaatta ccctactatt
      541 taataacaat gtttataaaa ttgctttttg attggctatc atctatgtca tacctatgtc
      601 aataattccc agtga
//
LOCUS       KCKM01001073             829 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17023apa ultra-conserved element locus
            uce-7653, sequence.
ACCESSION   KCKM01001073
VERSION     KCKM01001073.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 829)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 829)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..829
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17023apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>829
                     /note="ultra-conserved element locus uce-7653"
BASE COUNT          213 a          187 c          161 g          268 t
ORIGIN      
        1 tccaggcttg gagttgttgg cacccatctg gtgtgaagac gtaaaatcta tcagtccctc
       61 cagatcctca gtttgtctct ggtgcctggg ggaggtggtg cttgacctac atctccattt
      121 gccatcacgt tgcttagtca gtacagaaag tcttctcttt cttgatgggg gacttgattc
      181 ttttataaaa ttgtcctgca caaattcttc ctgaaaaaat acagtttaga ggaagtattg
      241 tcaaaaattc tgtctctctc tatactttat tatcccctca tttttttcgt catttaactc
      301 caattatggg atgctaagtg cttttggaaa tttcattgtt aatatcttct tacagtgcta
      361 ttaacgtaaa tcaacgttaa tagtgtccca gcaagtataa aagcaatcaa aaattcagta
      421 ctcacgaatc attctgtaat ttcagcataa aatgttaata gaaataaaat ccaataccat
      481 aaaatatcag caaattcaac tttaaataca tgtgatgaat ggcttcaccg ttctgtggca
      541 tcccgtggac tcctgcaccg tgaaaccttt tgctggcgaa gctccgacgc acgcgactcc
      601 ctcctctgtc gccttcccag catgacgtgt gcacgagttc cagaagctgg aaatccttct
      661 tcacgttcca tgtggcatct gcgttcaggt gttcagtggt aacaggaagg attactggga
      721 atctgttaac ttattctagc tacgagaaaa ctcgctgctg ctttattgcc gtccacctgg
      781 cttggagagc ttcggctgca ttacctttta ttgagactgg gattctctt
//
LOCUS       KCKM01001074             952 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17038apa ultra-conserved element locus
            uce-4180, sequence.
ACCESSION   KCKM01001074
VERSION     KCKM01001074.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 952)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 952)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..952
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17038apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>952
                     /note="ultra-conserved element locus uce-4180"
BASE COUNT          314 a          189 c          161 g          288 t
ORIGIN      
        1 gtaataacaa gaaaagtaga ctgtatgcag tggaatcaga actagggcaa gtatttctac
       61 cctacaacta acactcttaa tttggtagct ttagtgggtt tattattaag tccattagta
      121 aatttatgag tgcatctatc gttgtggacc ttcagaatat tgcaagacac aatcctagat
      181 gatttacttg ttttgcttta caaggagagc tggatcaagt ggatccccca cttttctgca
      241 ttcataggat agcagaagag ttgctaccat tttgctagca gagtcactgc caacattctg
      301 ttattcaatt cctcttactc ccaagtatat cttctagagc aaaaaccaca ttactaaaat
      361 tacaaatcac cttcagccaa aacaaagttg atttcttggc ttctggaaaa taacaacaat
      421 gaagaaaata agacattttg gggcatttga aatttaatct tcatctacct acatttgcag
      481 tccttctggt ttttggcaag ttcaaagcca ggcctacatt cgcaggcaac cccacctttg
      541 ggtgtctccc ggcagatgtg tgcacaccca tgatctttgt tcatacagtt cataccctct
      601 gtgaaaaaaa gaaagaaaaa tggaaaatat tagtactaaa ataaaattac aaaataatta
      661 cacatattca gttctctagt aattttaact gttttttatt ttgcatctgg agtgtgtccc
      721 acaaggcaaa agcaggcagc tgaaaagagg catacaatca acaaaacaat gtaataaagt
      781 acaaatctcc tctccagcaa gtacaacaag aactactgca gaatatacag tgtctctgct
      841 gtgtgtagaa ccacaggact tgtgatttct ctattccgta tctatattcc aatatttcat
      901 gaaaatatca tggacttaaa ggatattcca ggcagttgtc tgtcacatag gt
//
LOCUS       KCKM01001075             942 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17052apa ultra-conserved element locus
            uce-1995, sequence.
ACCESSION   KCKM01001075
VERSION     KCKM01001075.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 942)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 942)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..942
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17052apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>942
                     /note="ultra-conserved element locus uce-1995"
BASE COUNT          257 a          188 c          224 g          273 t
ORIGIN      
        1 gtgtgattta gggtaagtga accattgtcg gtttgctaca aggagctgca gagggaaggc
       61 aacagcctgg ccatctgcat tattttgccg tgcatcaggt gctagaagtc actaaacgta
      121 ctgtgagtca caatattttt tcccaatttg actcgcttgc ccaatcgtat ttttacttca
      181 gcctttaggc ttgaaaaagc atgtgcataa tcagttcatt ttgtgtggtc taggctataa
      241 aaatgccccc tctgttcttt ccatatgaaa aacgtgtttt taattttggg gaacttatat
      301 aattttctgt gctttctttt gtatctcaga ttaaaaacaa atgctccctt cccctaactt
      361 tgcatgttcc aattacggag ttgtgaaaat aagtcatcct tcagcttttg ttactttaaa
      421 acagctatcg gtgatgtcag agtcaatact aaaagcatta agaatgctgg cagaatgtaa
      481 tgcagctgca atccaacatg atgttggaaa tggggttgag agcataaagg ctttccatat
      541 tcccagggcg cacaactgct cgcggccttg gctttgatct cttcaaaggc tgctgcctcc
      601 tcctagatgg agagacttgg ctgccactcg ctcgcattga aaaaaggcag aggtctctat
      661 tcaggcagaa atcaatcact gtgcagaaac aattatgtgt aattcaacca tcatgaaaac
      721 agggcgagat tatgggtttg ttacctgagt gactgcgtgg agatggggag cagcggacgc
      781 gggagtcctg ctgacatgcc acatcttgat gacaattata gacacatgaa tgatgtggcg
      841 ggcgggggcg gcgagatgac aaatgctggt cacgctgtcc agcagagcag aaaatgaggt
      901 tacaattggg agataatgtt tgcatatgta accatatttc ag
//
LOCUS       KCKM01001076             578 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17068apa ultra-conserved element locus
            uce-7928, sequence.
ACCESSION   KCKM01001076
VERSION     KCKM01001076.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 578)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 578)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17068apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>578
                     /note="ultra-conserved element locus uce-7928"
BASE COUNT          157 a          160 c          147 g          114 t
ORIGIN      
        1 ggcgggcagc gccggagggg aaggatgtcg cggcggtcgc cacggatcga gaactataaa
       61 ataacccttt ttggggcagg acagggcgag gtaggaggct cccgtccgcc cggggctgct
      121 ttcgctcgtg tccaaccccg atatttcaag ttgtgcgttg cgataagaga aaaaagtgca
      181 gtaatacgtg aaaccaggta gtttgtgaag gattaatcct ttgcttgctt caaatctgaa
      241 caggaatctc cacacaaatg ccccacatgt ggaagaacct ttaatcaaag aagtaatctg
      301 aaaactcacc ttcttaccca tacagacatc aagccctaca actgtgagca gtgcggcaaa
      361 gtgttcaggc gaaactgtga tctacggcgg cacagtctaa ctcacacccc gcggcaggac
      421 ttctagagca gccagggatc cacgcccgct ccggcagctc caacttgccc aatttactca
      481 aggactgtgt tgtaggaaca gacacgcaca cacgcacacg gagacacata cgcagactcg
      541 gggccaagct ttcctaccac acgtctgcga aactcctt
//
LOCUS       KCKM01001077             186 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17084apa ultra-conserved element locus
            uce-1476, sequence.
ACCESSION   KCKM01001077
VERSION     KCKM01001077.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 186)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 186)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17084apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>186
                     /note="ultra-conserved element locus uce-1476"
BASE COUNT           71 a           35 c           31 g           49 t
ORIGIN      
        1 atataatcgc cgagtggttt aaattgaaaa cccccaactg aatcaatatt tactgcattg
       61 aaacgaaatg aatagtaata agtcactaag ctccctgtcc tgtttcataa aataaaaaat
      121 tataaaaatg agcacaggcg cagagcgact atcacattaa cttttacggc acttggggag
      181 tcataa
//
LOCUS       KCKM01001078             735 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17098apa ultra-conserved element locus
            uce-6095, sequence.
ACCESSION   KCKM01001078
VERSION     KCKM01001078.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 735)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 735)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..735
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17098apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>735
                     /note="ultra-conserved element locus uce-6095"
BASE COUNT          211 a          157 c          136 g          231 t
ORIGIN      
        1 atcccccaaa ttacgattat cagtatttat caaaaaaaca cggtgtcatg ctgcatttga
       61 tacaaaagca tccagctgaa tattctatta gacaggtcct gtgaagttaa aaagaggacc
      121 aggctgagtt acctcaccat gggaagaaaa aggcatgcac aatcagatat ttaacactcc
      181 tttgcaatta tgggaatttt tattctctcc ctagtaggga acgtagcatt ttactgcagt
      241 gtttcaagtt tgcctccaat ggtatctgat agaagtgctt ttatcccctg aagatacagt
      301 acaaaataca aatcatcatt ggttttatct cagctggagc tgcctatttt ctaaatgagt
      361 ttactctgtg ctactgccca tcaggcacat ttttcatcct tcatccccac tcttttacta
      421 tagctgggtt taagtccttt cttctgtcct ttgttccttc agctcagcga agtaaacagc
      481 aggattgatc ttacactgca ttttggtatt gttccaactg ctcatcaata gacatgggct
      541 gggaatgcac tgactggaaa agaagggcaa gattgaaatt cactttttgt tctttgtgcc
      601 ttttagtgtg cagcggaatg tccctaatct gaaagctgct acactgactg cctatcaaca
      661 tgcaaattaa tcatcaagtg acgagtccca tattcgctcc aagtaaaagt ctttcaaggt
      721 atctgtggaa aaaga
//
LOCUS       KCKM01001079            1129 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17113apa ultra-conserved element locus
            uce-2572, sequence.
ACCESSION   KCKM01001079
VERSION     KCKM01001079.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1129)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1129)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1129
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17113apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1129
                     /note="ultra-conserved element locus uce-2572"
BASE COUNT          325 a          194 c          263 g          347 t
ORIGIN      
        1 ttttgtttgc tgacagagac catggcggcc cagagggaat ggaccccgat ggtgtcattg
       61 aggtgagcac agtgtgaact gacttgagaa cttaattgct aatggagata agtgttggat
      121 ttcatatctg tttctttctt tctttcttac agagcaattg gaatgagatt gttgacaatt
      181 tcgatgatat gaatttaaaa gaatcccttc taaggggcat ttatgcatat ggtttcgaga
      241 agccttcagc tattcagcag agagctatta ttccatgcat caaaggtatg caggtgactt
      301 atttgttgat gccaacatca gataaagtct tgtaaaaatg tatacactgt tctgttagtg
      361 tgtgaggata ccaattttta atccttactg ggcaagtgat atgatggtac accatctttc
      421 gggactgacc tgaaatggag agaactctta atactgatca cttacttcaa agggaataga
      481 ataaaactaa aagcatgaat gatctctatg gaagctgtaa atgtatatcc tactttttct
      541 agggtatgat gtgattgctc aagctcagtc aggtactggc aagacagcca catttgctat
      601 ttccatcctg cagcagttgg agattgatct caaggagacc caagcactag tattggcccc
      661 taccagagaa ctggctcaac aggtattgat agtgtagttg taaatgtgtg ttgcataggt
      721 ttcaagtttc acaactgaga taatagactt cttaaggggc tgtaactaat ccattcaaaa
      781 ctcctttgtg tgaagtaatg ggggataaaa actggcttct gccccacaag tcctccgcct
      841 gtttgaaaag tccagttgct gcatgtagaa ggcacgctgg ggcagggatg caggaggcag
      901 ctgctatgcc ctgtaaagtt ctaaacagga aaagaaaatg caagataaca tcattaaagt
      961 agttttctga gtggaaacaa aacataactt cttggaagct gtttgaactt gtgcagttgt
     1021 gcaacatgaa aggtgcagtg cacatgtgat caccttaatg tatttttatg gtgtttttct
     1081 tgcatgtcta ctttcaaggc ttggtattct gttttatgag gtggaagtg
//
LOCUS       KCKM01001080             490 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17129apa ultra-conserved element locus
            uce-6179, sequence.
ACCESSION   KCKM01001080
VERSION     KCKM01001080.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 490)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 490)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17129apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>490
                     /note="ultra-conserved element locus uce-6179"
BASE COUNT           94 a          108 c          129 g          159 t
ORIGIN      
        1 tggaggggtt cactgtatct cacactgcac taggacaagc caggggtaaa accaaaggtg
       61 ggagccaggg agcaggcggg ctgcgtggga aggatctaag cgaccccttt gtagctcttc
      121 agtgttggtt ctatttatac gagatttcat ttccttgctt gtgatgcctt gttttttgta
      181 cagttttatg tacatgcagg tgtagctttt ctaaaggaga aatcctatgg cagagtccca
      241 actatttttc agatggtgac ctatgtctaa ggcaatgcct cttgctaagg ttgtattgct
      301 ctcaatgtgt gatgcatttc cctgtgcggg gaaggctttg ggccttgggc ttggttttcc
      361 ccgggcgctg tgagcacaat tgattccctt ctttctgttc agagcagtga gcatgacacc
      421 gtcgtgatcc cctttccgtt ctctcctgtt ctgtttgttt gctgagctgt cagatgacca
      481 actccattgt
//
LOCUS       KCKM01001081             633 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17144apa ultra-conserved element locus
            uce-4696, sequence.
ACCESSION   KCKM01001081
VERSION     KCKM01001081.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 633)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 633)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17144apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>633
                     /note="ultra-conserved element locus uce-4696"
BASE COUNT          216 a           90 c          137 g          190 t
ORIGIN      
        1 ggtaaaggta acctagttga ttataaaatg aagtaactga acctcacacc ttttttttat
       61 tgggaaaaag aagaaaagag ctggtcgtaa ctaaactggc aagcatgaac ttctgttcga
      121 agactggagt attcagcctt atttttgagg attatgctaa atgatgggct atccagactt
      181 atcttcaagc taacacactt aactgctgcc ttagcatcag gacacagatg gatgggaaag
      241 atgaccctga cctccataag acccacattc ctgtgcaagg atagaagcat gataatcagg
      301 aaatgatggt tattagttac agaaaatgca ttattgtgaa aaccaggaga aaagtgctta
      361 tgagaggaag tgattggatt atgggggaat gagagaataa gactaggtca tttctgctga
      421 gtaaattgct gtgatttata agagaaaggg tatagtgata tcacggtctt gtattgacta
      481 gattcatttc acaaacaaac ctaaatcaga atgtggcagt tatccactga agaaaacagt
      541 tttttaaaag ttggggggat tttttgcatg aaacacgttt gatacattta attttctatt
      601 tttctttata attatacagg ttatttgaga aaa
//
LOCUS       KCKM01001082             832 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17159apa ultra-conserved element locus
            uce-1741, sequence.
ACCESSION   KCKM01001082
VERSION     KCKM01001082.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 832)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 832)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..832
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17159apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>832
                     /note="ultra-conserved element locus uce-1741"
BASE COUNT          233 a          168 c          209 g          222 t
ORIGIN      
        1 ttttttattt cagcagatag cccccaaaaa aggcagggat gtcaaaggct tcgagtcccc
       61 cctttgacat tcacgcagtg ctgagagtca gccggggtct cagctctgac aaatttgcat
      121 ctctttgaat gtgacgcttg aaaaaagccg gagctgctag attaaatttt tttttttttc
      181 cgtcgagaaa atgagaaaag cctctatctc tcagccgagt ctactgggaa gatctttatt
      241 ctgattcttg ttagaattgt ttatcaccct gacagaccag actcggacga gataaaggcg
      301 ctgctccatc acggggcctg acagtggtag gacatgcaga gaaatgaaag gagcagggga
      361 aaatattatt aatagatgcc gacttgattt gcctctatgg cacgtcaagg aaggaaggga
      421 ggggggagcc acggcttgat tgcaagccta tgaagttctg tccaaaaaag aagctatttt
      481 tcattaagtg atagaagggc ttttttcatg ttctttcctg aggagctgat aacttatgca
      541 gtttattcta accctgctga tttctgtcag ggaaagaaaa ctcatgaaag atggctccag
      601 ctcgtccttt tcagagaagg aggctgcctt gtcaaaaatg gtagcaaagc attaaagccc
      661 tggccttgac tcctgcaagg tcccttggat ctgattggat gtgcatgcga cggtggaatc
      721 gggggaggaa ggcgttatta tgtacccact gtggccctct gaggaagaaa agaatcaaaa
      781 tatatatgca gagcagtgct tgcatatacg cacgtgcata gacacagtac at
//
LOCUS       KCKM01001083             770 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17175apa ultra-conserved element locus
            uce-4557, sequence.
ACCESSION   KCKM01001083
VERSION     KCKM01001083.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 770)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 770)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..770
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17175apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>770
                     /note="ultra-conserved element locus uce-4557"
BASE COUNT          278 a          146 c          121 g          225 t
ORIGIN      
        1 taactctgct acttaagtca gtggcagatt acaaaaatta acagtgtcaa ttactaacta
       61 tagcacaccc acagatacaa ctatgaaagc acaacaaagt atcaggcttg ctaatttcac
      121 agaattacac ctttattcta tggcatttga tttttacttt catctcttat tagaaatata
      181 gaaatgcaag atcaatagat aacattttgc aagccaaagt tgaggacccc ttattactgt
      241 ttggacttct tattactcag agaacatgtc cttcttgttc ttttttattt aaatcagtta
      301 aatataaaca aattaacttc ctatgcatgt tgtttctgag tgaattactt ttcattttta
      361 gagtggtttt ccatcactat gaaccttttc ctttccctta tgcaccagca aacatactga
      421 tacaatttaa aggtcatgtt cttttcaaac tgacagggcc ctccaaaatt ttgacgagag
      481 tccctccaag aatcacacca tacaaacgga aaggaattaa gtaaagcatc acttgatgta
      541 ggctcaatca tgtgaactga ttagaaaatg taaccatgga gagaggtgat tcaaagtgtg
      601 acggacaacc tttcaaagaa aggagatgtc atgttgataa taataagcaa gtacctgaca
      661 ttgaaggagg gggtgaacac agagggtcaa taaagatata attgccttca gctactatga
      721 aaaagaaaaa aaaatccacc accagaaaaa accacaacaa atcaacctaa
//
LOCUS       KCKM01001084            1189 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17190apa ultra-conserved element locus
            uce-7628, sequence.
ACCESSION   KCKM01001084
VERSION     KCKM01001084.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1189)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1189)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1189
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17190apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1189
                     /note="ultra-conserved element locus uce-7628"
BASE COUNT          369 a          268 c          228 g          324 t
ORIGIN      
        1 cctgttctga gctcgctttt agcctcaaaa tttcctgctt ccatttcagg catgcaagag
       61 cagcccgtac acccaaagct tgtcctctct tcccagctac actaatagat caagtagaag
      121 atgtaccagc tccggacaca aactttcttc aattgtctct tcaaaccatc tcagccagtg
      181 cagcactact catattgcaa gcaagagaac tgatttccat gtatgtataa agggttggct
      241 tctggcaaag atttatataa ttgtacataa tgtgaagttc agttgcaaca tcaaaaggaa
      301 gattattttt cctttcatga gtgtttgttc actcatgtgt tttggcaaca accctgatcg
      361 caaacacagt atccaatccc atgaaaaacc ccacaaacca aatcaggcga tgctaaagga
      421 aatgaaccat aaagtggggg cggcaggata gtatctaaca tttctgcaaa caatccattt
      481 gtcactttca tggaccaggg ttaattaata ttctataaag gtcttccaaa agctgaatac
      541 ctctcaagtt ctgaattcat ggggctgacc ttagactttc tcagaatgat ttttaatgca
      601 gtctgttatc agcaaaaccc gtttaaacac atgtcccatc tgccagcacc ccatttgcaa
      661 aagagcttct tatacttgca gacagtaaag cttctgcccg cttccctctc tcctctaaat
      721 accagctgta tggtaatgag cacaaacagc tgaaaaatac tgcacagtaa caaagctggt
      781 acgaagcggg cagaacaacg cttccactca atgaagcagt tgtagcatga atttagcaga
      841 ttagctattg aacaggggtg ggggaaggtt ggaaaaaaat gtgaagggtc tgctcagaca
      901 gcaagaaaat gaaaagagac caaaggggca caagctaccc aagaaaagcc caaattctaa
      961 agtacttttg ttgaacctca tgaaccaatt cttcaaattt tctaaggctt attcctcgcg
     1021 tactaatgat atgccaaatg ctagtccgat catttgcaag ttcagttagt ttttaaagga
     1081 ggcaacttgt taatgaaagt tttccattca ttaacaaatc tcttcatcgg ctgggggcgg
     1141 gggaagtcct taagagcagg aacacgctct cctacttcag tttctggta
//
LOCUS       KCKM01001085             862 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17205apa ultra-conserved element locus
            uce-5937, sequence.
ACCESSION   KCKM01001085
VERSION     KCKM01001085.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 862)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 862)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..862
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17205apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>862
                     /note="ultra-conserved element locus uce-5937"
BASE COUNT          272 a          146 c          154 g          290 t
ORIGIN      
        1 taatttattc tggataattt tagcaaaaag gcagctctta ttttaaacca atgccttata
       61 aactcatctt ctaaagataa aagctatcaa gaacaaaccc atgatattat accaggtacc
      121 aattactgca gtttcttaat gtgcttgtgt tttttggttc tgcatttatt aaatatttag
      181 aagttcagct gcagatattt ttaatcaaaa ccaggatttt cttacaaaat gggtgattac
      241 atcatttgca catttatatt gtaagacatt ttaacgatat aagcattttt tcatttggac
      301 agcaaccata ataaattgaa ataaaattca gccttgattg atgttctatg tgtcatgtac
      361 agggcaagtc ccatctatta aatgtggttt gccaaggcag caatattagt agcatttgaa
      421 tgtttttctt attaaggaga aaaatggtca gcaacatcaa taccgtctgc tccaaagacc
      481 atggtaaatg gaaactgcct gcagcacatc tgaattcctc actgtatttg ggatgaaggt
      541 atgatgcagg caatgagttt ttccttgaaa attaggatag actattacag ttcttaggat
      601 gaaagagaga ggctgattac aacataatgg agtgtaccat attcatctct ttgaaatatg
      661 acctcactcg gccttttcca ttttacaatc gattctctca ttctcttaat gaacctgtgc
      721 gttcatgagt cttccttgga agtatgcaca tgaagtatta cagtagcaga gagtaattgt
      781 ctgacaagca agtgcaagta aaatgtctct cttgtagtct tggtcaataa cattatggac
      841 cgttaatgcg ttgcatcagg gt
//
LOCUS       KCKM01001086             435 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17220apa ultra-conserved element locus
            uce-2908, sequence.
ACCESSION   KCKM01001086
VERSION     KCKM01001086.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 435)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 435)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17220apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>435
                     /note="ultra-conserved element locus uce-2908"
BASE COUNT          138 a           70 c           77 g          150 t
ORIGIN      
        1 ttagactttt cctgtataac ctatggctga tttgcagctt ccttggtaat ttcttagcag
       61 gcagcagcaa tttcttatat cttcagtaat gtcttgaatg tacatttttt atattaatga
      121 tctcaccaag agaaaaagtg tactgtgaat gcatgatggc catatggaaa agacaatgaa
      181 gtttagtaat taaaactgaa aagggaaaga actatgcagt aattagaaca ctgattaatc
      241 agctgataat tttatcttga ttaatgctgc tgattttcct cttcttattg acctaggaaa
      301 ggtaggttta gaccaattaa atataaatta ttcccttttt tcacattcca ggcagattcc
      361 agtgttctaa gtcatactat gtttaagacg tagcgctgaa ttgctcttac taaattgggc
      421 agctcaacaa aaggt
//
LOCUS       KCKM01001087             579 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17236apa ultra-conserved element locus
            uce-7457, sequence.
ACCESSION   KCKM01001087
VERSION     KCKM01001087.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 579)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 579)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17236apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>579
                     /note="ultra-conserved element locus uce-7457"
BASE COUNT          156 a          110 c          131 g          182 t
ORIGIN      
        1 ctcttagata cttcctctcc taaaatgcct ggcccgcgtt cctcgtacgc ggctgtattt
       61 gttgcgtcca gcctctaatc tgtttgcagt aaggaatttt caatgttaaa aatgctagta
      121 aaattgattc aggtaagatg cgcttaataa aatagtgaca taattacagt ttgtacataa
      181 taatacgtct gtagtggtgt aaccttggct gtgagttatg aaatcagtgt ataggccaat
      241 tagccacata ggtttttttt ttaactaaga cactataaac actggtttta aatgtcctaa
      301 ttagtaactt gctcattaat taactttctg attaattgtg tagcaatcta atttgtagat
      361 gaggcactta aacagtgata ccttgtaact ctttcgtctt taaaattcgt aattaaaata
      421 cagttttgca accggttggc ctgcaggttt ggaggcagct gccctgagag gctgggaggc
      481 gatttgggcg accccgcttg aagtctggaa cctcctaggc gctgtttccg caacccgggg
      541 gaaggggcac cgcttcagaa aagcagtgtg gaaggggat
//
LOCUS       KCKM01001088             552 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17252apa ultra-conserved element locus
            uce-3922, sequence.
ACCESSION   KCKM01001088
VERSION     KCKM01001088.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 552)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 552)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17252apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>552
                     /note="ultra-conserved element locus uce-3922"
BASE COUNT          165 a          100 c          116 g          171 t
ORIGIN      
        1 tcataaatta agccctctta tgaaagaaaa taggaagttt gctgttgttt ttaataagat
       61 tttattgtaa gtatggcaac ggtaattctg tcagtcccag ctttgctgca catgtgtagc
      121 tctgtgcttt gagacccttg aaatgtctgt ttttaggaca tcagcagggg gctaatgaaa
      181 aggctttgtt gattttaacg aattgcaagc cactgtagcc aaaataaata taatctgctt
      241 tttggattag ttgtcacaca tgattttacc tactaacagt gattaaagaa ccctggtgga
      301 ccagaagcat agcggctctc tggtgactct tgctaaaata gcaataaaca gaagtaaata
      361 aagacttagg gcattagtta tctttaataa acagtgacac tgcatataat gttgggggaa
      421 gacttcaaaa acctgcaggt gttactcttt ctagtgcaga gagagttggt catgttagat
      481 gtctggaaat aatggcatca ctgagctgct ttcctttccc tcttcaaaag ctgccaaccc
      541 agctggacac ct
//
LOCUS       KCKM01001089             982 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17281apa ultra-conserved element locus
            uce-3097, sequence.
ACCESSION   KCKM01001089
VERSION     KCKM01001089.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 982)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 982)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..982
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17281apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>982
                     /note="ultra-conserved element locus uce-3097"
BASE COUNT          311 a          200 c          189 g          282 t
ORIGIN      
        1 cattagtctc actaagacaa aatgccactt tgcagcaagc aataaatctg acaaagcatt
       61 tttaaacata atgccctaac tcgctaagac aggcttatac acgcttccaa actcttctcc
      121 ctgaaaatta accccgttga ttcttcaaat gttaagggtc ttgggcaaaa gtaaaccgaa
      181 ggctgaagta aaataaccat ccccttggaa ccaaacgaaa acttaaatcc aggagggatc
      241 acagtctaat ttcatataca tatatatgca tgtgatacac atatatatga aattaaaatc
      301 gagacacaca tgacttgggc atcagaaggg gactgctact ttcatacatt cataaatagc
      361 tgctgaactc tactcatgaa gaagctcctg taggcagttt ggggatttga aaatctcggg
      421 gacctcactg tccagcttac agatgacctt gtatatggcc ttcttccagg aaggatcaac
      481 atctttgcct gcgataatgg cattgaaaaa ctcccgtaac gtgatctgag ccacttccag
      541 gaatctctct ggaacctgct gatacaagga gacaatggca ttaatacagt tttcaatttc
      601 aagtctctgg ttcttcaaag gaaactgagc taagttcttt ctttcagaaa ggggcttaca
      661 tagcacctgc attttctaaa tgtggcagcc ttctattctc ttatgcaaag ctgttatata
      721 tagtactata gcaataactt ttataacatg tgttcgagat ctttgtaaag tctactgaca
      781 gaatgtaggt aacaaaatgt tactgtctga gtttggagag tgggggattt ataggatata
      841 attagcagga gggaaaacaa acacaattgt ctttaaggag agagatctct gctcgatatt
      901 ttacccatgc atttatggct atgttctcct ctccatgtgg gaactgatac ggaagttatg
      961 catgcacaga aagccttccg ta
//
LOCUS       KCKM01001090             599 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17297apa ultra-conserved element locus
            uce-34, sequence.
ACCESSION   KCKM01001090
VERSION     KCKM01001090.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 599)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 599)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..599
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17297apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>599
                     /note="ultra-conserved element locus uce-34"
BASE COUNT          182 a          103 c          123 g          191 t
ORIGIN      
        1 ccactggata tcttaatcgc gtattaactg atcaacgtgc ttgataaaag aaagcttaat
       61 aacataaaat gtgagtggca gtaccttgag aaatccatgt gtctttttga cagtgaagat
      121 ggcgacaata ggaatacttg atgggccaga caggagggaa cagaaaggat tttaacatgg
      181 ttttgtttaa cagcaggcca taatcgaggt gcagaccctt gcatttattc agtgctgaga
      241 gaattactag tttgataacg actaggaatg ttgttattaa aacagtatgt gcagttcatt
      301 ttcaacagtt ttgaattaga gcctgcacta atgaaacgga tacggtttct ttcacaaagg
      361 gcagatctgt tagttaatat agctgcagca gtgccttgtg gaccatgcct ttagctctat
      421 ttgtatttca cagcatgata agcaaagagt gttgattttc aaggatcctg ctgatgaaag
      481 gtaatggcat tattacatct ttatctcaaa aaaagaactg catggtaaat gattattttt
      541 tctcccccat cctctctttt ttttttcccc ccgttacaca aaagatttct tggttagaa
//
LOCUS       KCKM01001091             672 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17312apa ultra-conserved element locus
            uce-6850, sequence.
ACCESSION   KCKM01001091
VERSION     KCKM01001091.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 672)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 672)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17312apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>672
                     /note="ultra-conserved element locus uce-6850"
BASE COUNT          171 a          141 c           98 g          262 t
ORIGIN      
        1 tttgttgggc agtttatttt gtctttgtca acctgtactt ggggccgcta attcgatttt
       61 ccattgagag gtgcggatat ctatattatt ttcctaaaac tccagagaat attataaatt
      121 tctttttatt gcttccagcc atgttattta aagtaattaa ccttaattta taaattttta
      181 tatcaaactg ccttttaact tttagaactg gcaggagaag tccatttccc agggctccta
      241 atagttctcc atttaatcaa aattcatcca tcagattcca gtgttaaatc atcttttaat
      301 tgggagttac attctggtta atagttttat aattcgccgc ctctaatagt ttttaccaca
      361 gggatctact ccattttttc tcactctatt attcctgatg ttcagcaggg acattttaaa
      421 aacgttcact tcccctgcct gttctttgtg atctcattaa ttcttgatag caagttccct
      481 ttctcctcat tactggagca taactacctt tatcactagg tgcaacctta ctcatttcta
      541 caagtgctct ccagtttttt attctttttc ctcttacccc aacaatctgc aatttatttc
      601 agcaaataag atgatgtgta ctgcgtatgg tcttggcgct tgacacgaca gagatttcaa
      661 actggagatt ct
//
LOCUS       KCKM01001092            1138 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17328apa ultra-conserved element locus
            uce-1172, sequence.
ACCESSION   KCKM01001092
VERSION     KCKM01001092.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1138)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1138)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1138
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17328apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1138
                     /note="ultra-conserved element locus uce-1172"
BASE COUNT          383 a          201 c          221 g          333 t
ORIGIN      
        1 ttatatactg aggttttttg tgtctaggaa ggctctgcaa aatctatcat actaatagtt
       61 aatgcatctc ctgtcttttt gggcaaagat actacactgc ctatctctgc aaaaataaga
      121 aagcaacaca agataaaatt attaatcata ctaatttata atacaagggt ttagaaaagt
      181 tctgcatctg cccataatat tcctgttgat acatgttttc tgtatagaaa actgacaaat
      241 gtctctggga atcgagcttc ctttaaagca cttctaagaa tattagcaga taaagaaaag
      301 agattttaca gcaaaactca cataaaaacc catattagga atgataccaa acttaaagaa
      361 tgttgtaaaa tgagcatgga aaaatgtaca aaatgaattc atgcccattt acatgctttc
      421 agtcaggcta ccagataaca aagcctctgt ctttgtgtta acactgcaga ttaggtcaag
      481 tttttacccc tctgagctct tttcctgtaa atgacgggtt ttgatgtgaa acaagcaaca
      541 tgtcaaagca agttgaaaga tgtaggcatt ttatgccatg tcacaatgac aggccggtga
      601 atatttgggc cattaggggc ttattagtga ataaatgacc agatggttca gtgatgcaca
      661 gagatggaca gaactggatg ctactaatca gcactgtctg tacttgatgt caaatcacat
      721 gacacagtaa cccatggata ccgaataaaa gttaccatta gcaagtcaat ttgatatctg
      781 tgtggtgtaa acagacttat aactgcactt cagagctgcc tgttgttaag gagaaataat
      841 ggtagagtat ttaaataaac acactctact cttatcaagt tatgataaat ataaatagaa
      901 tttcaattcc caagacctcc tttttattct gaagagactg tggaaggata tttacatgtt
      961 agactatctc cacagacaaa aaggctgggc gggaaatgct gtgaaggaga agcaggagac
     1021 cctttcttca aacaccatgg ttagcaacat caagcgatgc tttgtttgtg catttgtcac
     1081 aggaatgcaa actttgagaa taggacctgc tttgtagggg gagaccattt gccttgcg
//
LOCUS       KCKM01001093             234 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17344apa ultra-conserved element locus
            uce-5928, sequence.
ACCESSION   KCKM01001093
VERSION     KCKM01001093.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 234)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 234)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17344apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>234
                     /note="ultra-conserved element locus uce-5928"
BASE COUNT           55 a           62 c           61 g           56 t
ORIGIN      
        1 gggccggtgc attctcaacg cccgctcctt cccgccgcat ctgtgcagcg aaacacgcat
       61 cgctgggagc cactttcatg attttgttgc gagcgggatt agctggatta gggtctgatt
      121 cataaggacc ccctgcggct gtgaggaagt ttcatcacaa ggtcagtgtg gtgtgaacta
      181 tattctgtca acaccaccac tccttatagc cgactacaaa aaatacaaag gggg
//
LOCUS       KCKM01001094             874 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17360apa ultra-conserved element locus
            uce-6367, sequence.
ACCESSION   KCKM01001094
VERSION     KCKM01001094.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 874)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 874)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..874
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17360apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>874
                     /note="ultra-conserved element locus uce-6367"
BASE COUNT          278 a          154 c          181 g          261 t
ORIGIN      
        1 gcactgatac aatgtacaga gctggggtca aaaatgaagg gcagaatggg actgcttagc
       61 ttcattcagc tgaaccatgc aaattggctc ccaactgaat tgttactgtt agctgagtaa
      121 tctttgttgt ttagagataa ataataatac atgttactga attccactga caaataaatc
      181 atttaatgat tgagattata taaacatgca tattgaaaaa aggccttgag aagtaaagct
      241 cccttcagtc gataacagga cagttttgta aaccacttaa agctgtgata aaatcctgct
      301 tgactggccc acaagcagat gtgacaagtt gaatttattt cctctcttac caggaagctt
      361 tgcaggaaac tcttaacata tggtgctttt cacttccatc tagagctata aatgttattg
      421 gaaaaggatg ttcccaggag cagcaagttt ctgacgtctc tgccaaatgg actccaaatg
      481 atccttctgc ggttctgaat tccccgagtt cttaggagct ggcagccaag aatctctgat
      541 ctaaacacag ctcactaatt taattatttt attatagatc tgtggaaggc tcttgcagac
      601 cagtgacttt gcatctgtat tggatctagt taggcaggaa gcacaagtta gaagagtata
      661 aatattttgt ttcttaactg ctttttgctt ggaaacttgg aaaccatttc acacgcaaat
      721 cagtcacaca agtgtgaatg cagaggaagg agaaagagag ataaaagtaa catcaacttg
      781 tatttgcttt gtgttttgag tatcagtatt tctgggggag actgagtacc gtgtgttgaa
      841 taagcatgag taataatgaa aatcacaaca tgac
//
LOCUS       KCKM01001095             768 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17376apa ultra-conserved element locus
            uce-1794, sequence.
ACCESSION   KCKM01001095
VERSION     KCKM01001095.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 768)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 768)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..768
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17376apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>768
                     /note="ultra-conserved element locus uce-1794"
BASE COUNT          235 a          150 c          158 g          225 t
ORIGIN      
        1 ttcactacat taaactgctc aaataaagca aacggatatt ggaaagagtt ggccatctgc
       61 ctttattttc ttttactttt gttaaggaaa gggaaaaaaa ataaacccca ccacagcccc
      121 tgaaaggaga aagagcacag ccatgaaact gatagtgaca aaaaacaccc ttttttatca
      181 ggtcaaaatc tcatctaaat gcagttctga tgaatggtaa aaagcttgct ttgtggattt
      241 ggagtgggtc tcaagaccag caatgaagtc taatgattat ttaatggtgc cgcacttgaa
      301 gcaggattat gtgagactct ctcccccgtt aagagtttga tgaataggtt ttgtgacagc
      361 catttaggaa taaacaagaa ttcatcagtc tgcataagaa gaagccagtt tatagattaa
      421 gtttcttgag gtaattcatg aggtcagtcc catttagatg tagactatta gggcttagct
      481 tttgagagcg ggcatacaag ggagttactc caaatggacc ctgctaatac aaagccccct
      541 ttcagaggga agcctgaaat ttttatgacc ctgctgctag gaagcacatc aacttgtcac
      601 tgtgaagatc tgctggggca agacctcatc actctattaa agagctctgt gaccctattg
      661 atttgaagta tttaaagcag gggtgaagtt caaagcaatt tcttttctat actattactc
      721 agcctctctg tgtcttggct ctaaaacatc tgctgtcagt tcctctct
//
LOCUS       KCKM01001096             708 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17390apa ultra-conserved element locus
            uce-7390, sequence.
ACCESSION   KCKM01001096
VERSION     KCKM01001096.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 708)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 708)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..708
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17390apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>708
                     /note="ultra-conserved element locus uce-7390"
BASE COUNT          236 a          123 c          116 g          233 t
ORIGIN      
        1 atagttacca cttacattca tatctgtagc tgagggaaaa catctactag aaggccgctg
       61 tttaatagtt gccactcttg agtccacagt agcattgtct gcaattcttg atggcttgga
      121 aactggtact atttcatcca ccttatctgt aacataaaag tattcagtaa aataattatc
      181 atgtgtccag aaaagaaaaa tttaagtatt gcaaggtcaa aggaagagat ttacttttca
      241 aaaaaatgca aagaaaaagt tcttttggca ttttaacaag gcaacgcttg agcatcataa
      301 gtcgtgcaag ccgagcactt tttattgctg ctacataaca tgcatgcttt agttttaagc
      361 ctgcatgcat ttaatgttta cttagtgtga ctcgaaaaac aatcctcttc ttcaaacctt
      421 caaaatgtga agggagaata tctatataga aatggaaaga agacctttag aaataatgaa
      481 tctgtacagc actgtttcaa atagagataa gcagactgta cttagtcatc agaatttcag
      541 tgatattttg gacaataaca agtactccag aagtgctctt ttatgcctat tctcctcaag
      601 taatcacatc ctaatttatt cacacccttt gattagcatt agtaactgca tcatttgttt
      661 aaatgaaact tttatatgta ttttatattt tcatagctgg atagtctg
//
LOCUS       KCKM01001097             916 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17405apa ultra-conserved element locus
            uce-4202, sequence.
ACCESSION   KCKM01001097
VERSION     KCKM01001097.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 916)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 916)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..916
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17405apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>916
                     /note="ultra-conserved element locus uce-4202"
BASE COUNT          239 a          172 c          217 g          288 t
ORIGIN      
        1 atggagacat ttatactcta ataggattta cctttacaaa tatccgaaaa ccttttaaag
       61 cagagattaa attgtttagc tcaatattta atctgttact tcctctttaa agatgcccag
      121 tggaatttgt catacactga gctgataaca cataatattg atcagtcata aacataaaac
      181 agagaaatct caggaagtct tctgcggtct ttttcttttt aattaaattt tgatctgaac
      241 tgcttttgat taattttctt atttgtaagt atgtgaattc tgggggccag caagtttctt
      301 aagttgcctg gcaatggtct ctggtgagtg gcttagctca ggaacagtat gattgcattt
      361 ttatggtttt cagatattta atagcttctt cctgtcattt tctgaatgag tgaataaggt
      421 ttagccctct gggagccagc gcagcactgg agagtggaga aaatgactcg gatctgtgta
      481 cttgactgat tgccttagtc ttaattgttc tcttaattag ctgcagtagc aaccgcatct
      541 ggggagagat cacggtattg gtaaacagct ccaccttgga gtcctgcgta gagccttttg
      601 gaaacgtggc aacgagctcc gtgtctccgc cgagacacaa acctgccaac tcttcagccc
      661 ctgaagtctt tggtctcctc gtgcgatctg tcactctcgt ctgtgagatg caggcccccg
      721 actgtttgtt cttaaacaaa ttaagcttta atatgccaaa agccagcttt actgagcaga
      781 aggagggaag ggttaaacaa aagcgtgttg gtggagggtt gttcagacaa cttgagggtg
      841 tttctcatta gaagcgggag agaggttggg ctttggggac tcgaggcggg cttgaaatgt
      901 ttgtggtgga aaagcc
//
LOCUS       KCKM01001098             327 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17421apa ultra-conserved element locus
            uce-3161, sequence.
ACCESSION   KCKM01001098
VERSION     KCKM01001098.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 327)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 327)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17421apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>327
                     /note="ultra-conserved element locus uce-3161"
BASE COUNT          116 a           46 c           62 g          103 t
ORIGIN      
        1 aataatagta aagtttaatg atgcatagct ttgtgagact gacaaattcc cagccaaagt
       61 attgattccc agagaattta tgaagcacag gctctattct atgtgattat ggtccatttt
      121 tggctgaaag aatcatgtaa aatagatttt taaatgagtg gtaatagcca gacataaaga
      181 aggtattgat gtgtgtcatg aagggtgaaa tagcatgcca ggtaaaggca tataacaaat
      241 tgcaaacaac agtgctgaaa ctcctacaaa tgtaaatttg tttttagttt taatcaaacc
      301 tttctttcag taagtacaaa ttttgcc
//
LOCUS       KCKM01001099             639 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17436apa ultra-conserved element locus
            uce-823, sequence.
ACCESSION   KCKM01001099
VERSION     KCKM01001099.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 639)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 639)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..639
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17436apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>639
                     /note="ultra-conserved element locus uce-823"
BASE COUNT          188 a          121 c          135 g          195 t
ORIGIN      
        1 cgtgcctgat tattttcatc ctttgcagtt aagaagattc ctagtgttgt ccatatgaga
       61 ggtggctcag ctctacattt tgaggaaggg tgttcaatca gagctaaaaa aaaccacaaa
      121 aagcatcatg ttattctagg ccgggggagg atggaagaag gtggccattc aagcatttta
      181 aaaagtggtc tgtgctcatt ttggaaaaag acaggggctg cttgcaccca ttcctgctcc
      241 aatttaataa agttgttaaa gtagcaagac tgacaggtta attatccttt ataaaagggg
      301 gacaaattga actgtgtctt tccatcattt tttgatatat caagaagctc ctgaggtgct
      361 cagatgccac tctggtgaat agaacaacta atccactctg ctattctttg ctgaccctgg
      421 tccccccatc ggggccttgc agtatattgc agttggtttt tgtttcacat tcaacagatt
      481 ccactttatt ataaattcag aaggattttt ttcctccata tgttggctga cagctcccct
      541 gaaataactg atggctaaat ttaaactctg atgaaaatta acccgagtgt taaatgcaaa
      601 caggagctgc ttggaaagaa aagagttatc atggtaaat
//
LOCUS       KCKM01001100             846 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17452apa ultra-conserved element locus
            uce-5140, sequence.
ACCESSION   KCKM01001100
VERSION     KCKM01001100.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 846)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 846)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..846
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17452apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>846
                     /note="ultra-conserved element locus uce-5140"
BASE COUNT          277 a          142 c          181 g          246 t
ORIGIN      
        1 ctgtgataca gaaaaggtgt gagagtctca gtctgtttgt atgtaggtct ctgaatctcc
       61 aggtgagtga tactactcac atgcccacgt ctatccattc ctctgcctgt aaagcaattt
      121 tgcaggagga ggattagaac agattgctgg cattatggca gcaaggatat tgttgggagt
      181 aacttggcaa cacttgtagg tgttgcgatg ctggctcttt gctcaagggc aaggacaggg
      241 gaggggatgc tagatacaaa ccagtgaaag aaataatgtc aaaaaagttc agaagatgaa
      301 agcagtgaca gtaaataagt ctgaaattat tttaggttta catactttaa gtcctcagtg
      361 actgaaaaca cagccaagaa ttgcttcagc aatattcctt cataaatctg cataataatc
      421 tctcagaggg gctttggtga aattacaagt attcatttac taaattgggt tcagtgtctg
      481 tatcatacgc tgtatgaata ttcagtgcca tgaattcatc caaactatat tgaagttagc
      541 atggtctgta agctatctta aatgataact cagatgttag gcatgggcag aaaggacatt
      601 ctttcaaaaa ataaaaaaca agttccacta gaatctagta aaaaaatatt tagcagctat
      661 gtccctaaga atggcagtaa tatatgcatg tcttgtggaa tttctgatct ttatataagc
      721 tctgaattca gcaaccaatg tcttcttgcc agaagaccac aaacataatg caaaggattt
      781 atgagtgatt tatcaaatca tacattgata actgccagcc agatgcaagg agattgtttg
      841 actggg
//
LOCUS       KCKM01001101             819 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17467apa ultra-conserved element locus
            uce-5051, sequence.
ACCESSION   KCKM01001101
VERSION     KCKM01001101.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 819)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 819)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..819
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17467apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>819
                     /note="ultra-conserved element locus uce-5051"
BASE COUNT          276 a          135 c          132 g          276 t
ORIGIN      
        1 agtataatgg agaacaatct tgaaaaacag catttatgtc aggcccatag gttaacatgg
       61 ttcagatgag agcatcgaga gaaaacagta actttcctaa caaggctgcc attaatagga
      121 agcattaaat gaattaaaaa tacatatctt tatcacacat gaagtattaa taagcagttc
      181 tctcatgttc tccagttatt tagttgggtt ataattaatt atttttaatt gttcttggct
      241 atgttgtact gagcaccaga agttaaatct ctgaaaatat aatagctagg tgtttctcca
      301 aaggattaac tttaaatgtt tcccatgcac accactcttt ctgttcttta aaaaatattt
      361 tccattaaga tgcaaatgtg ataccttttt acccggagga actaggtttt gatttgcttt
      421 gacaaggtgt gaaagtgctt tctttatgtt cttttctttc atgctttgca gcacagcaga
      481 tggaagaaaa gtctctaatc cccattcttt tctgcaataa aaggtatata tttaatttca
      541 cattcctctg acgattattt atctaaagat tgctgagtat gatgccaagc gaatgaatac
      601 ctgaaaacag gagagttgtt aaagtccaga gtgctgcaat aacacattat cttctatatt
      661 caagctatgt attactaatg aaaaagatgt tttcaaatga catagaatca tctcttccat
      721 cacgccattc agaagtttta agttgttatg tttaaagtta tatgtttaaa ggtaaacacc
      781 actaaattac ataggcaagt accacaagac aactaaaat
//
LOCUS       KCKM01001102             864 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17482apa ultra-conserved element locus
            uce-2541, sequence.
ACCESSION   KCKM01001102
VERSION     KCKM01001102.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 864)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 864)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..864
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17482apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>864
                     /note="ultra-conserved element locus uce-2541"
BASE COUNT          187 a          216 c          216 g          245 t
ORIGIN      
        1 gaaaaaacgc aaaactaaag aagacagtag acccgagact cccaccgaca atgaccagca
       61 gcctccagag aacgtgagtg cctcattctt tctcccaaat catttagcac ctcctttggt
      121 ttcctgaaca acatgactag agcagggcag gggctgtgcc agtggaatag ctgagtggtg
      181 taggtgccag tcttgccagc ctgcgaaacg tgctacaaca gtgagcacct gcctctgccc
      241 aaaggtgcag ccggagtcgg gcagggtgcc gaagcggcat ctgatcctgc agtactcttg
      301 agcagccctg ggtgtgtcca gagctgctcc tgtgaggtgc gtgctcctaa cgagctggag
      361 gatgtcggct tctttggctg cctttgattg acttttctct ctgtcctttt ctgagctgtt
      421 ttctctttcc ccttttcttt cgcctccttt agattcagaa cattctgaag gtgctggtgt
      481 cagaccttaa ccgctccaat ggggtagcca taccctcatt ggacaagagg aaggtgaggc
      541 agtgctcgcg tccctcgcag tgactcgctt tccctcctgc atgcttcggg ttccgtttac
      601 actgacctca ttttttcaga tggagccttg tcctgatgta tgcactgtca gttgcttgag
      661 ttttgttgct ctctttatta acatggagct ctgtgttgtc atgcaattcc attgcctgtc
      721 agtgcttgct tctttctggt ttgcgtgaaa cttaacgtgt gaaaaagtgg actttgtcaa
      781 aaactcctcc ttgagacagc tgagctttga ggaaagacag gaatttaggg tgaggatata
      841 aactaaatta acctctgagg acaa
//
LOCUS       KCKM01001103             638 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17497apa ultra-conserved element locus
            uce-1751, sequence.
ACCESSION   KCKM01001103
VERSION     KCKM01001103.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 638)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 638)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..638
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17497apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>638
                     /note="ultra-conserved element locus uce-1751"
BASE COUNT          205 a          111 c          102 g          220 t
ORIGIN      
        1 ttttgtctgt tagtgatttt aacaacaagc actgaaagtt cttttgagga aaaatcttca
       61 aataaggcca tgcaatgaca ctttttaact acagttgttt tttattcagc cataaaatct
      121 atctttcata tagaaaccca cttacatgtc ttacttcagt gaaggttatt tgtagactga
      181 aggtcttttc ttgtcaagat atgatgaata ccatgtgtga agacagaaga gcatcaggac
      241 ctgtattagc cggaaaaccc actgatctgt gaataaccta aaaaagaaaa cctgaagatt
      301 agcaacgtcg cttttaagaa tgatccatca aattcaacaa gcagattcac ggagatgaat
      361 catctagttc cctttattcc aacaatacag taaaggttat ttcccttcct tacaaataga
      421 acttctgaaa tacaagaaat agagatttgt gagtcttttt cagtcatatg gcaatgattc
      481 tacatttttc attcagtgtc ctttttaagc atttttttct tttatttgtc aattgaagta
      541 ggtgtggctt agaccatcca gtacacagct aaactgcatg attatatcca gtttttaggt
      601 gagattatat tttctgtaat gattaaatcc tctgtcaa
//
LOCUS       KCKM01001104             756 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17512apa ultra-conserved element locus
            uce-2521, sequence.
ACCESSION   KCKM01001104
VERSION     KCKM01001104.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 756)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 756)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..756
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17512apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>756
                     /note="ultra-conserved element locus uce-2521"
BASE COUNT          252 a          125 c          105 g          274 t
ORIGIN      
        1 cacaacctcc tgtaaagcct gtatttccga aataatttta ttcagcttct gagaatctgt
       61 attgtcacca ttcatgccta aaacagaaac agatgaaatg aataatatta aaggcatttg
      121 ctttatttta tattgatttc tgacaaaatc ctctgtatca atatccactc tattgtcaca
      181 cttgtctatc tggttccata taaactgact atattgtatg aaagttaata taaaatcttc
      241 tcttggatga taacaaacac agtaatttgc atttaaatga caatgcaagc agtcatgaat
      301 acaacaaaac aacattattt gcatttaaat atagatttat aaatgacagg tatgctccat
      361 tgttcagtaa gaatttgtta ttctttacat gttgttcttt tttcagtaat gtatttttat
      421 ggtaattttt gtaacaaagt cattaaattg tgcaattctt accagataca gccagtagag
      481 tgttagcatc gactggaatg gcccattgtg ctattcctag aacaaacagt tctctccaag
      541 catcttccaa aagcatcagc tgtcatacaa tagatgtacg atataacata gtgtataatt
      601 tatagattta taaacaattt aaatatgtaa atttctgtta ttttaaaaac tactttaaat
      661 gcctgtcatg gtattttccc cacagtattc gttagctctt ctcttagctt tttgagaagg
      721 tgtctagaag taagtctatg gattatagca aattac
//
LOCUS       KCKM01001105             466 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17528apa ultra-conserved element locus
            uce-2439, sequence.
ACCESSION   KCKM01001105
VERSION     KCKM01001105.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 466)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 466)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17528apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>466
                     /note="ultra-conserved element locus uce-2439"
BASE COUNT          161 a           88 c           84 g          133 t
ORIGIN      
        1 tatcctgttt aaccatcttt taagaaaatt aaaaaaacct acagagcttc tgttccacca
       61 gagatccagc aatgtaattg tattgcaaac ggtttaacac aggaattatc tacccccagt
      121 tcaaggttta aagcttcaat cacactataa aagcatgaag tgatcacaga acaccaaaaa
      181 tactgggttt tgaagcaata aaactttaga gtgcagttgc cctcccttaa atttattcat
      241 gaacctacgt tgaaatgtat ggttcttttt acacagcatt tatagcttaa ttcaaatgaa
      301 tgtttctggc taggcacgag tgcctctaca cactcaagta taattcagaa cttcaaatcc
      361 gttaacagat ggtttgctgt ttctcaatag gctgcctgac ttggctacag tagcaaagga
      421 gggggggaaa agagagaaat aaatgaaggg gtcctaataa taataa
//
LOCUS       KCKM01001106             714 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17544apa ultra-conserved element locus
            uce-7657, sequence.
ACCESSION   KCKM01001106
VERSION     KCKM01001106.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 714)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 714)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..714
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17544apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>714
                     /note="ultra-conserved element locus uce-7657"
BASE COUNT          220 a          161 c          143 g          190 t
ORIGIN      
        1 agcatattaa attacagtct ttaatgagac agtttagtta gtaatttttc atttgtctct
       61 acattttgca aggacgaggc acctgcctct acaggagcta tgcttccttc ccttccttcc
      121 ccccatacac ataccaccac aaatctgaag ggatatttca atcaccactt tgataaagga
      181 gatcattttg gcatacaggt gatctcctag cagattaagg atatttactt tcttcctgat
      241 ggatcattcc cagagatacc agcacaacac aacctacgca attagttttc acaggtggct
      301 gttttgcctc cagtaaaact gctttctttc tcctcctgca agtcatagca gagcaaatgt
      361 atataaaaac atttcagata tgaaataaac actttcataa aagcagctgt gatgcaatgc
      421 atcatttctg tctgacctga gctatggaat gaacttttgt tgccaggatc aaagatggta
      481 agcagagagt ggaggatggg ggacaggaca aggccggggg aagatcaagg ctcagaatag
      541 cacagtgtaa aataacctca aatactcaaa gggtaaatgc cagtttggtg caaacacaca
      601 ctctttgtgt actctgctgg gcagtctctg caaccaggct gatgctgccg tgcaagacaa
      661 atcaagacag atgtccacaa cccagcctgt acagccaaga gttatagaaa gcca
//
LOCUS       KCKM01001107             935 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17560apa ultra-conserved element locus
            uce-166, sequence.
ACCESSION   KCKM01001107
VERSION     KCKM01001107.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 935)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 935)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..935
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17560apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>935
                     /note="ultra-conserved element locus uce-166"
BASE COUNT          299 a          138 c          187 g          311 t
ORIGIN      
        1 aaaaagtaat ttctgtattg ggtttaccat aaagatgagg ctctgtgctc aaagtatatt
       61 aagcagaagc atgggtttag ctgcctggct tgcagtgctg tgtcattgcg tgatagcctt
      121 ttgtttctga tttctagtta tgttagtacc ctattgatgt ggaaggtaac tagattgttc
      181 tgttagtgat ttctgacaaa cagaaattat ttgatatgct aaagctattt ctgacagaag
      241 atacaaagtt ttgacaaaca tgcatggcac agcaagtgtc caattctaaa gaggaaaata
      301 aatgcaaacc accattatgg ggaacacaaa cagcctgaaa gcaagttatc agtaagcaaa
      361 taattgttga actgttatga atggaaaagg atgttgaaat agggcatgat tggctgatgt
      421 tacatatgtc cttgattacc ttccttgtgc ttttatccta ataagtgaca ttctttgtat
      481 tcccttggat ggctagacag tctgacactg aagaagaata aatattgcat gtggtacaca
      541 ttaagctgtc atctaggaca gcatttataa aaagtaacta gaaaaattca taagaaattc
      601 tgcagtgcta cagtttcctg gctccagtca taattgtcaa agttcttgac acattcaggt
      661 cttctgaaat gatttaggtt tacagttact tggtgtatga ataattatta aggattcatt
      721 ttctctgatg atgcagactg ttaatgttag ttctcaaaat gttgtatttt cgttaaaggt
      781 catgtattaa aaaaaacaag tgtgctgtat gtaggtagtc ctcttgcaga agtcaggagt
      841 tatacatgta taaagtaact gataaaatga aaaagctctt tcaaatgcta tctttgaatc
      901 ttggtggaaa atccattatg aacattgttc ctact
//
LOCUS       KCKM01001108             247 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17574apa ultra-conserved element locus
            uce-4564, sequence.
ACCESSION   KCKM01001108
VERSION     KCKM01001108.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 247)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 247)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17574apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>247
                     /note="ultra-conserved element locus uce-4564"
BASE COUNT           85 a           37 c           39 g           86 t
ORIGIN      
        1 ataagagatt acattgtagt cagtgttctg ttaaagtttg aattaatttt tcccatgggt
       61 ttttcacatt ctaattttca actaaatgag acatctgttt cagaaaagga aaatttgcta
      121 tggttgtcat agcaactatc attctgtaag aaaattattc caatggttac tttagaacag
      181 aaagatagaa attcagtaca taaagcaaca tctgattgct agcacgaatt ctgataattc
      241 agccctt
//
LOCUS       KCKM01001109             788 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17590apa ultra-conserved element locus
            uce-370, sequence.
ACCESSION   KCKM01001109
VERSION     KCKM01001109.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 788)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 788)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..788
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17590apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>788
                     /note="ultra-conserved element locus uce-370"
BASE COUNT          265 a          150 c          156 g          217 t
ORIGIN      
        1 ctgaagttag gaaataagga ttgggctcat atggcagaac tagagattac tcttggttca
       61 tttaaactta attaacctgc aattatgatt aactcggggg gaaaaaatct ttccaaatta
      121 aatacaaaaa tatattattt cctaagtctg tccaaagttc ttattatgtc aatattaaaa
      181 ttcataaagc agcactaagt ggcctgaaac atctctaacc ttgacagttt ttttcagggg
      241 taataataat ccgcagcaaa tgcaggccaa ccaaaaacca cttaactaat tagtagttgc
      301 agtcaccgag aaaacatgaa tcaacactgt tattacaagt ggcacatttg agtggcatct
      361 aattatgact tgatgagcac gatacttgca ttatcaacat tactactgca tcccatcagg
      421 gactaaaagc cgctgatggc attgactgcg agaaactccc actcaatggt gctgcagcac
      481 ccaacaatct ccttggcagg ggcaccctca ctaaatgaca tgttaagcat aattactggt
      541 agacattgta aataaacagg attggaagtg aaaattgtac caagtgcata agacacaatc
      601 tgacacattg gaagtggcag ccttaattga gagtttcttt gactgctcaa gatcatttca
      661 actgcatttc tcggaggaca gtgattataa ctgtggagac agacggcata atggtatcag
      721 cactgctgac agagcagtga attaaattgt atctgctgtt gtgtgaaagc cttgatgaga
      781 ggtacaga
//
LOCUS       KCKM01001110             962 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17606apa ultra-conserved element locus
            uce-4119, sequence.
ACCESSION   KCKM01001110
VERSION     KCKM01001110.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 962)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 962)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..962
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17606apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>962
                     /note="ultra-conserved element locus uce-4119"
BASE COUNT          259 a          183 c          234 g          286 t
ORIGIN      
        1 aaaaaataca gatttttgga tattctgagc tcagttttca ccacgagcat gttttgttct
       61 aaacgattga tcatttgggc aatgcgacca tgagttctga aggagttgcc ctgataggtt
      121 ggttctctga ctcgaagaag ggagatcata aattggatga attgatcacc taactagaga
      181 agcttcgttg atgcagaggg ccatatacaa aaaccagccc caagccagct tcatttttaa
      241 tgtgcggaat caatgtaatt cgttggacct taacaaggta cttatcttgg gcaagtaggt
      301 tggttttggt tgaagtttta gttcattcca tacaaaccag agtcactgaa gcagaatgcc
      361 ctgctcctga aaatggagtg atttacattt agcatctgtt ttgggctgag agtgggaatt
      421 agctttgtaa tttcttctgt catgccactg tcagaaaatt aagctgttta cgctagacta
      481 tagaaggtta atggctgttc tagcaaaggt caagtggtca ttttaaaggg aggctgtgct
      541 gaataatcga aaatggcaga agaataaggc ataaaatctt aactgactgc tcatcctacc
      601 tttttttttc ctgttgtgta gaaacctgtc tttgctctgg agagctagga agaccagctt
      661 taatgtgaat tgctattcca gaaaaacacc gtgaaggcac tagctaattt tatgagcttc
      721 atggcaacag gaacgtgttt ggaaggaacc aaatgtacct tggagagctt ttttagtccc
      781 aaaagcagtg ccctggcttt cctcatgcgg gagactggtg cccagcagtg ctggtcagcc
      841 gtttggtggg ctgaagaagg ttttacagct gctggtcagt gccagccctt atcttgcacg
      901 tgccaagggg tctccatcgt tcattaaaag agcgatggag cttctgtcct ttgcgagcag
      961 ct
//
LOCUS       KCKM01001111             995 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17622apa ultra-conserved element locus
            uce-5679, sequence.
ACCESSION   KCKM01001111
VERSION     KCKM01001111.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 995)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 995)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..995
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17622apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>995
                     /note="ultra-conserved element locus uce-5679"
BASE COUNT          343 a          197 c          167 g          288 t
ORIGIN      
        1 aagctatgtc aggagtgggg gaaaaacctc caagttttct ttttagcaca gtattcatat
       61 tgtttagtcg tttcatttcc aacaaactgg ttctcagcat acatttctgc cacgggcatt
      121 gtaatcattg ggtggcatct gtcttgtctt ttacatttgc ctcagaagcc tgttatcagc
      181 cattccactt ctctgtacta tggctgactg caaagtctcc tacacagtag gaaatattaa
      241 acacatacct cttaaagact tgaattgcat tgaaagtaac aaggcgatta ttatgtagtg
      301 tttattgcat tttaaactct ttaaagatat ctaattctgg gcagcactgc atccctacac
      361 acagttgaaa gaaaattcca ttctgttaac atcagattta cagtagtcac acaatacaca
      421 aaaagtcctt ttcactatct tgaaaatcaa aaacacaaca gtaagcttaa agattacagg
      481 caacagcatt caaacatgga tgtgggtaga gaaaggagta cctggcatga gtacctgctt
      541 agtttgactg aatccttgat ttttaatttg gcttttcatg ggccgctcac aacaccaacg
      601 ctgtgtgagg tatggtagtc agctgcaata attcataaac cctacacttc catcaatcca
      661 atgctactgg ctctcgagtt acagaacaaa ctgcattaga atgcaaggca ataaagcaaa
      721 aaaactagaa acatccttga caaagaaata ctagcagttt atatgaaaac aaagtagtcc
      781 aacatgtgcc tcaaatatta agtattaaag caaaagtttc tgccgatgta ccaacacaat
      841 atggacttaa atacaaaaac agttcaactt tttttttgat aacaaaatcc ctaaaaataa
      901 aaaaagataa ttaattttgc tatggtgact atattacaaa tatgtcccaa agaggcacac
      961 taatgggggc acgagtctgc tacaaaatag ctgag
//
LOCUS       KCKM01001112             409 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17638apa ultra-conserved element locus
            uce-4616, sequence.
ACCESSION   KCKM01001112
VERSION     KCKM01001112.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 409)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 409)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17638apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>409
                     /note="ultra-conserved element locus uce-4616"
BASE COUNT          135 a           70 c           77 g          127 t
ORIGIN      
        1 tctttccaga agattgctgc agctagctca attattactt tcatgggatg tcttgtttgt
       61 ttccaccaga cggaagtaat ataaaattat gtaaatcagc tttcttgaag taaagaatca
      121 tggaccagtc aataatgttt atgcattaag aaagggcagc tcctcctgga agaaataaca
      181 cagggagccg atcataagta aacatttcta aacagacaaa gggctggtcc ctgcagcaca
      241 atatattatc atatttccac ataattagtt tgttttccac ttgaaatcag aaaacgattc
      301 gacattgcat tcggtgcctc aggatggtgc atacagtaca attctcatgt gcaggttcat
      361 atgttgaata attagtaaga attaatctgt tgaaattaaa gtttggaat
//
LOCUS       KCKM01001113             477 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17653apa ultra-conserved element locus
            uce-6824, sequence.
ACCESSION   KCKM01001113
VERSION     KCKM01001113.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 477)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 477)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17653apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>477
                     /note="ultra-conserved element locus uce-6824"
BASE COUNT          161 a           84 c           97 g          135 t
ORIGIN      
        1 tttttttgtt agacattaag gctaatctat actactacag cagtgcagag gaaacatgta
       61 ggagcctcag gacctgaaaa gtacacagag gaatttatta aaaaacagat tgaagagttc
      121 aacctaggaa agagacattt agccaacatg atgggagaag atccagaaac ttttacccaa
      181 gaggatattg atgtaagtac agttgctctg ttggagaagt aatttactgt agagtttcag
      241 atattgaaag cactttattt cagcatgagc ctctcagctc tctgtgaatt ttaatcaaac
      301 tgtcagaata agaaagaatg ctgctataca ttgcaaacat tgcaactgtg actgtgaata
      361 gagattctac ccctgctacc gtgagaggtc aagcatcaca gtgtagagct gtataccata
      421 tcttgctaaa gcacagtagg ttctttttac aagtactaat ggataatccc cttgatc
//
LOCUS       KCKM01001114             620 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17667apa ultra-conserved element locus
            uce-939, sequence.
ACCESSION   KCKM01001114
VERSION     KCKM01001114.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 620)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 620)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..620
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17667apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>620
                     /note="ultra-conserved element locus uce-939"
BASE COUNT          195 a          144 c          128 g          153 t
ORIGIN      
        1 taccagactg taaagtctga agagatttat gctaatgaag tggtttgttt gcatcatttc
       61 atggaaaggc aatgacaaaa cattactgtt ctaaaaatcc cttttcctct cctgcttcca
      121 cccccaaaaa tatgctttat attctaagca gcactcacct agcagcttcc aggagttcgt
      181 ccttcttgta ttcacctaaa tgattgcaaa atatcatgct gttagcattt ggcagaagac
      241 agattaagaa atgcaatagg aagcaaatac agaattaaaa cagagaagag gagaaaaaag
      301 cccacacccc gctgggtgat ggagctgtga cgttagccag cttgtggagg cagcatcacc
      361 agtaccttgg agacgggcag caaattgacg catctcctta tccaatcctc agatggaaag
      421 gctttcttcg gacaaccaat gacggcgaaa tcttgtgtcc agaaacacgg tcccgctgat
      481 aacagcgtgt cagctgaaga caatgtcccc accccctgcc ctattcagtg tgtcacatta
      541 tacttgggaa gcataataaa ttccgagaca aaagcgaggc agtgcggctt tttaaaaggt
      601 acaaattacc gatctccaaa
//
LOCUS       KCKM01001115             667 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17683apa ultra-conserved element locus
            uce-41, sequence.
ACCESSION   KCKM01001115
VERSION     KCKM01001115.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 667)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 667)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..667
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17683apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>667
                     /note="ultra-conserved element locus uce-41"
BASE COUNT          219 a          147 c          116 g          185 t
ORIGIN      
        1 gagagcgctc attccatctg gccttaaact cgctctcagt ctagcaatcg ttaggcttcc
       61 taatataagg tgtaaatgat ttacgttgca ttgggcagcc ccctctgccc gacgagcccg
      121 tccccccacc ttcttgccaa ttctcaaaca aaaagtgcaa aaaccaacag ggctacttca
      181 gcaactagga agggcttcag ttctattaat taaaatatgt tttaataaaa agaaacatca
      241 cacattttga taacggcctt ccaaggctgg aaagtattta cattgttgca ttttagggct
      301 gctgtgaaag ccgattttgt gctattcagg gaccacaata ataacgcttt aaaattcctc
      361 actgggatgc aatgtagtcc ttttgatgga aagactgtct ttctcattcg gcagaaataa
      421 atccattcat ttgatcatgt agtcattgag ggcaatacaa aacaaaccaa gtgtgagaaa
      481 ttctatgtga tgaagtaaac aaaacaaaac cccccaaaaa aggggaaaaa ccatttccat
      541 gacaaaaaga ttctttgtcc ttaatctacc caccatatgc aagcgtttct ttttagcata
      601 tctcttgttc taatctcggg tgacatggct acatagataa gattcacaaa acaaaacaaa
      661 aatctag
//
LOCUS       KCKM01001116             881 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17698apa ultra-conserved element locus
            uce-1205, sequence.
ACCESSION   KCKM01001116
VERSION     KCKM01001116.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 881)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 881)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..881
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17698apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>881
                     /note="ultra-conserved element locus uce-1205"
BASE COUNT          225 a          164 c          174 g          318 t
ORIGIN      
        1 ttgtcgcttc ctggatggat ttttatttaa aatagacctt gttgctcaga aataagagtt
       61 ttctggttta gcaccgtgct tagcttttgt cttcctgctc tctccagttg tttgctgttg
      121 acttttcaaa cgtacataag catgggtttg tcttttaaac ctgaccacta aactgtgctc
      181 tgtgtgatgc acttgcgatt ttttcccctt tttgctgctt gtgttctctc tcagttgttg
      241 actgtgactg gaaaataggc gtacaaagca ttttgcattc tctgaatgta ccacacagta
      301 attctgctgt ctgaaaactc tgtaatgtca ataattgatg cacttgagaa gtggtaatta
      361 aattagttaa ttatgctggt aaaattacat gcaattatgt gactgcaggg tatgtttagt
      421 aaattaggct ttcccatact cactacatat tgtggtgcca attttgttcc ttgatgatta
      481 ggtagctttt gatacttctt aattgattta atacctggat cttcattagc cctcgattgc
      541 tatgcaatgt atgtctgaca tttttctctc tgatatttca cagagtattg ctcgtaaaaa
      601 aaaaaaaatc aatctataca tatatatgta ttcctgtcag atgttaaagc attaagactt
      661 cagggaaaat gctctcttct acaagtgtct tgcggtgact tgcccactcg tgtgaggtgc
      721 caatcaacta actgtccctg ggaaccctct aatatagaat gactgatttc atttatgttt
      781 ctcgtgaaag atccagataa ataggtgtct cggggaagac tggcacggtg acagctgttt
      841 tgatgacacc tgttatcttc gcggagcgca gtgaaaggtt a
//
LOCUS       KCKM01001117             642 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17713apa ultra-conserved element locus
            uce-345, sequence.
ACCESSION   KCKM01001117
VERSION     KCKM01001117.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 642)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 642)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17713apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>642
                     /note="ultra-conserved element locus uce-345"
BASE COUNT          227 a          111 c          114 g          190 t
ORIGIN      
        1 agtatatagt tgtgtcctct ttatttcaaa gccagcctat aacagagctc gggtaggaaa
       61 cagaaggaaa gtatcatggc aggaacatca gtgtgttttg gatgcaaagc aggagcttat
      121 ctgttttact actgcagcac cagagaaaat caattttgac acagaactgc cactttacaa
      181 gcaaataact atactttcca ataacctaat ctgtgcaaag cctactgaaa attccctaaa
      241 gaaccagtag ttaaaacctc cattaaatca aagggtttaa tatgggaagg gaagagagga
      301 tgcagtttga cttgggaatg taatggactc agtggggaaa taaatatgtt gttttatgtg
      361 tacagttaca gaatttgaga acacagcatc catttcaaag ggaattctct tgctgtgcaa
      421 cttattccta aacagatgtg atttttgctt attcaaaaac atttaggtaa caattacagc
      481 ataataaatt ataattgcca tcatcttcca gctatgctaa gacttctatg caaacacaaa
      541 gaaaatgcaa ttatatagaa ctgtaaatcc tattttcagg tagcttagag cactgacaaa
      601 acacttgttt attttactta gacgaacaat acttttaaat ct
//
LOCUS       KCKM01001118             928 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17728apa ultra-conserved element locus
            uce-24, sequence.
ACCESSION   KCKM01001118
VERSION     KCKM01001118.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 928)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 928)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..928
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17728apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>928
                     /note="ultra-conserved element locus uce-24"
BASE COUNT          320 a          164 c          165 g          279 t
ORIGIN      
        1 ataattagat tttccattga ctatgacaac catagcaata taatgataga aaattaatca
       61 acatatcctg aagtttattt ttcccctgaa aaacatatta gaaaggtcac tgtgatctga
      121 gaaaagagct aggacagttc cctgatagca cctggtgaaa aaatattata tataaataat
      181 caaaattttt tcatccccct ttacccctga agcaagagaa gacctgcttt tttatcttgt
      241 taatagaaac cgcaatctct cattaatatg cagggctagt gtgctgcttc tcaagaggaa
      301 aacctgcagc aaggctttgc cattaatcaa cttcagccca gcagttcagt gagacatgat
      361 gatacatgtt tttaactcta aattaatgaa tatctttacc aactgtcaat aaatgaagaa
      421 aaacactggt gaggaacaca agttgaggtg ggaaatttcc aaacacaaca gagtgatggg
      481 gaagtgggca actaacaaga ataataatgc tgtcacacac aaacaaggct taacatgatc
      541 caggccctac tcaaggaaag ggttgtgctg caatgataaa tctgccaaaa cctaattatt
      601 tttgacacat tagatgcatc agggaatcgc tgtgaaaaaa aaaaattcct tatcaagtag
      661 tttttgcatt agaaagtgac tgaacctgcc agccatctct tgggctacac tcttcaatga
      721 aagaagtaac tttgaatttt aaaaggtaca gattgcttta atattcattg caaaataact
      781 tattattcaa gccttattgg ggaggctctc agttttgttt tgttttgcct tttctttcgt
      841 ttggctttag tatattattc atttttggaa aggggctatc aagaatactg aaatgcaaag
      901 ctgtggtaaa aaagctgcat tttaacca
//
LOCUS       KCKM01001119             833 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17743apa ultra-conserved element locus
            uce-1512, sequence.
ACCESSION   KCKM01001119
VERSION     KCKM01001119.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 833)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 833)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..833
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17743apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>833
                     /note="ultra-conserved element locus uce-1512"
BASE COUNT          280 a          144 c          155 g          254 t
ORIGIN      
        1 aacatcaata tggttaatga atgggtttgt ttaaaacatt acagaaatta aactgtattt
       61 attccttggc cctttaaatg atccttgtca tctaactacc atttacgaac catcacttgt
      121 gattttatct gctactttta aagttatgaa cagatcataa caatccattc aataattagg
      181 agattacaag tttctgtggt tttgcacatc tatttcaacg ctgctggacc cagagctgaa
      241 tgaaggagag ggacattctg tggtgtgtcc atgaagggga aacagtgaaa aataataacc
      301 tattagcagt ccataaagtt caatataaaa tatgtttgtg ctaaagtgtt aaacaagtag
      361 aacaaatagc gtgctagtag catacaaaat taaaacgagt cacaaatgga tattttctat
      421 ggcaatttat ttcacaatta ctcttgtgga agctttcatg aattaaatat gagttctatc
      481 ttgaaattag gtgttataag gctaaattac aagaggcagc cagtaattga ggtggctgaa
      541 acatggggtc tagtgaacta atctcttgcc gtgtcacgtg gctgtcctct cgccaatggg
      601 aaacctcccc atcacaaaaa cagaggcagc tgagaaaaat tgatttctca tctgagccat
      661 atttgatagc ttttgaaatc gaaaattgaa attaactaac ctaagccccg tcgtaacaaa
      721 agagcaaatt aaatatgcaa catggcttcc tattggcagc aagagggcct gccaaggtaa
      781 atttgtaaat agagtttaag atgcaatcct tttttccttt ctctcagtgt aaa
//
LOCUS       KCKM01001120             668 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17773apa ultra-conserved element locus
            uce-4050, sequence.
ACCESSION   KCKM01001120
VERSION     KCKM01001120.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 668)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 668)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17773apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>668
                     /note="ultra-conserved element locus uce-4050"
BASE COUNT          195 a          116 c          144 g          213 t
ORIGIN      
        1 gaaatactgc gctttgggta taatgccctc aaaacaaaac cacaagttcc caagtttcgt
       61 tgtgtaaaag cagaggagac aagtttttgg ttgtgtgtta gtttggtagc gtacaaggtt
      121 ttgttcctgc attggcttgt gctgctcagg tttaggcaga cttctctgag acagatgata
      181 gagagtgtga aaatcccggt agtgaagctc taatctgttt gttttggggt tgtttttttt
      241 ctttacttta actgtgacac tatttataaa tctaaatcta catacagagg tcattggttg
      301 gctgaactta aaccatttta cttagcaaat ttaattaaga aaatacagtg caactcataa
      361 gcaaatgagt ttttcctagt tttaaaccaa accaccctct tgagtgctga ttgcctcgct
      421 cgacccctgg tgatatagaa acaggcaaaa ttaaaaagga cattaaagct tcattaaatc
      481 tgaaacacat ttagtacagt gacatatctg caggctattt cagggaagat tacatactct
      541 ttggtaagtt tcttaattta taataccttg acaatcttat ggggaggaaa caactctgac
      601 tagatggatc gagtgatggt tcaggggatg cggaactggc ccgtggtctg tccatgttcg
      661 ctgagaaa
//
LOCUS       KCKM01001121             991 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17787apa ultra-conserved element locus
            uce-1985, sequence.
ACCESSION   KCKM01001121
VERSION     KCKM01001121.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 991)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 991)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..991
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17787apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>991
                     /note="ultra-conserved element locus uce-1985"
BASE COUNT          297 a          206 c          199 g          289 t
ORIGIN      
        1 ctgttgaaat aaatcactcc ctgaaaataa tattcaaaga agtcggtaaa gtctttcgcc
       61 gcacggattc cggcgtacga agagctgtga cacccagaca gacagacaca ttaacctctt
      121 agaaatccgg agaatctaag ccttttaagc gttgccgcct gcgattcttc cataaaaaga
      181 ggcatatagc attaaagctc tctatcacaa gtggctttaa tattgaaagc ctccaccgcc
      241 gacagacgga gaaaggtgga gtggggggaa gaaggaggag aagagacacc taccctgcat
      301 gtatttgtat tattaggctc agattattat tgttttcact gcaggcttcc cttctgtttg
      361 cgagcgaact gtttttgtct cgagcgtttc tcggggcacg cgcccgcgga cctcggcgct
      421 acacagggct ctattaagcc gccgttcaat agtttggtga tattcagaca atattgaaac
      481 attcccaaat gaactttgca gggagacatt ttcattcgct gcctccctcc tcatgcatat
      541 taacaaatgg tatgcaaggc ctcatttaat tcactgattt tacattcgga tcactttctc
      601 ttttacagct atttttaccg ggcttcatta atctttgttg aatacaatgg catacatctt
      661 taatgcggcc gctgtcaagt catatttcag taagagctgc aaactgaatg acagcaagca
      721 atattaataa atttaacata gactatatca atttttaaca gaatgaatgt ggaaagctaa
      781 atgtattatt tttcgtttaa atcatagggt ttatcaccgg ttaagtagca gcgatttcgg
      841 gaaacttgtg acgtgccgta caaatagatt tacatctcat taataagtaa attaggcaaa
      901 tgcctttcaa gttcagacaa gtacataagt gtaatctcca tattaaagga gtagtctttg
      961 ataaaccact gaggaattgc agcagccaac t
//
LOCUS       KCKM01001122             959 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17803apa ultra-conserved element locus
            uce-5969, sequence.
ACCESSION   KCKM01001122
VERSION     KCKM01001122.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 959)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 959)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..959
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17803apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>959
                     /note="ultra-conserved element locus uce-5969"
BASE COUNT          284 a          167 c          147 g          361 t
ORIGIN      
        1 tatttttccc ttgtatttat tttaattggc atttgttttt cttcactgcc acagtacttg
       61 ttttcctcca gaaagatgtg taaatactta acctagcata attatgcata tatattctta
      121 ttccattagt aattcatgct ttaattatgt ttatcatttg gtcttctgta tatttgtgtg
      181 actcagagta atgtaaaaat gtttcatttt cacaggcttc tcctattttt ctacagataa
      241 attaggaaag cttgggaaat tgcatactga aaattgaaat gaggactata caatccattt
      301 tgagacttgc cttttggtgt ttacttcaaa gcatgcttct gtgtgtgtgc ttgatttaca
      361 tttagcaata tctaagtgca aatagtaatc atacaccaaa gtaaaccaga ctatatgcaa
      421 ttgcttcctc tgtttcttca attgcagttg caatcccata gattccaatc ttgacaggta
      481 gcataattag aaaattctct ttgtcttatt aaatgtgact cttctcaata gaattcactt
      541 cattgcaggc aaagaacaga aaatatactt caaatctaaa atgggaaatc aagggggact
      601 gttttatttt tatctgtctt tgtgcaagcg acattattat caaaggatat tgtaatgctg
      661 aaaatgtact tttgggattt aaatcacgta ttagcctgga aagcaaaaag tgctgtaggg
      721 cccatgcaat atattttctc attaatctga ttgaaagatt atccttccta tagctatgaa
      781 aagtctaata cccatatatc catctttcct gctagtaaaa ttcagctttg tgcgtagtca
      841 ttgtctcttg tgtctgaggt cctagactct tcttcatttc tctgtataag cctatctgta
      901 ttaaaataaa ttcagaacag gccgccattt catgcacaca ttttgattat ttcataagc
//
LOCUS       KCKM01001123             485 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17819apa ultra-conserved element locus
            uce-458, sequence.
ACCESSION   KCKM01001123
VERSION     KCKM01001123.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 485)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 485)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..485
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17819apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>485
                     /note="ultra-conserved element locus uce-458"
BASE COUNT          131 a          108 c          111 g          135 t
ORIGIN      
        1 gtttaaaagt ggcattgttc atgaaaagat ttagtgaggg atgaagaaat ttcttgaacc
       61 taaagacata atctggtgat ccaattctcc ccactgtgtc cattcccgtg aaactccatt
      121 tacttgctcc tatccgtcac cagctccccc gcatcccacc tagccaatcc tctaggtttc
      181 ccacattgtt tccccttttg tcttttcagt ctaaacagaa gaacaacaga caaggtttcg
      241 aagggcaggg agcatcaggg gctggaagag aatggctaag atgagggtca gagtcctagc
      301 cctactgcca acagttacta gggtttgtgc tgcctggctg ggcagtgttc aaagactttg
      361 ctgggctttg ttccactgtg tagggattag gcctggcggt ctgagaattt gccttctaat
      421 taaaaaggat aaaagataga agtagcatta gactaaaaca tagcagtgat acttcacagg
      481 ctttt
//
LOCUS       KCKM01001124             798 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17835apa ultra-conserved element locus
            uce-4784, sequence.
ACCESSION   KCKM01001124
VERSION     KCKM01001124.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 798)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 798)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..798
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17835apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>798
                     /note="ultra-conserved element locus uce-4784"
BASE COUNT          251 a          123 c          115 g          309 t
ORIGIN      
        1 ttttaagatc tttttccctt ataataaatt cctttaaaag caatatatac agcagaacat
       61 tctgagttta agaaaattaa ttgtacaatg taatgaaaga tttttctaaa gctaagacaa
      121 tgtaacttaa aagtcagctt aatgttctga aatataattt tgctttcgtt gcacttggaa
      181 aatgaaggtt tctttcatat aatgtatatc ccaagatgat ttcaaagcac tttcacttag
      241 aaaagctagc tgctattaca tatgaatttt caaagcttgc caaggctttg gaaggaatga
      301 tgaaaattac tattgcacga ccttcaggtt ttctttgttt cataaaaggc taagatagca
      361 tttttgtcat ttttctttca gctcaggtct ttcatcataa atatcaaagc atgcaattat
      421 gcctgctcat atcctaccat attctgcctg ttttctatct atagagatgg tgttctcttt
      481 taggatactt ttttcttttt ttttttgcaa atctgaaaga agtcccatgt ttttgttgag
      541 tgccataaat tgttcatgaa atgcgtgttg cactgattaa aaagaagaag agttgattaa
      601 aatgactttt attcttttgt tctaaataaa atcctaaagt aatattcaag tgtcaaatct
      661 aacaagatca tagaagattg atttggccta caggtagaat ttttaaatat tcctcattgt
      721 aaaaactgag acaatcctct cttctattaa aatctctggt ttcatgctga attattcctg
      781 ttgttccttt tcattttt
//
LOCUS       KCKM01001125             349 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17850apa ultra-conserved element locus
            uce-7038, sequence.
ACCESSION   KCKM01001125
VERSION     KCKM01001125.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 349)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 349)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17850apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>349
                     /note="ultra-conserved element locus uce-7038"
BASE COUNT           78 a           94 c           74 g          103 t
ORIGIN      
        1 gcagggaggg ggaaagctct ggctgatgtt atttacctgg gactaaactc aggcaccgtt
       61 tgctaaaata gaagccgggc ttaaattgat tcctggtgtc tatatttcat gttgaaaatt
      121 ggcttgtaaa tccatgtttt gatctatgag ggccgtctcc ttaagaaaaa gcaagagtaa
      181 atgtgtaatt tctcccttga cagcacacgg cgcagaggcg atccttcttc ccgctcccct
      241 ccgtttcggg acagctccac tcgttccgat taccactctt tcttcctcgc cccacgcctt
      301 gatgtctcca tttcattacc gcccgcccat ttatcaagct gttaccgta
//
LOCUS       KCKM01001126             857 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17880apa ultra-conserved element locus
            uce-5260, sequence.
ACCESSION   KCKM01001126
VERSION     KCKM01001126.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 857)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 857)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..857
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17880apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>857
                     /note="ultra-conserved element locus uce-5260"
BASE COUNT          256 a          183 c          155 g          263 t
ORIGIN      
        1 aaattatttt tgcctggcat tgcacttctg actccacagc tacattttat gaggcttctg
       61 tgcaattagc cagttcgtta ttttatccta attttataat aaatcacttc actctttttc
      121 tctcatccat catcaactta tctgcccgca agtcaaaatg ataccaatta ttaatcaagg
      181 ccagaggcac ctgctcctgc ataggggcac catgtttcaa ctgtcaggtg gcatccatcc
      241 cagcctctct ttgtcagcaa taaagaaaat gaaattggac taatatgaat ctcatttctg
      301 ccctgattaa aggcctacat tttccctagg cattgcctga ccaggtcctg acttgtgaga
      361 tattcaatgt tcttgtaatg tcattcggac agagcgcgcc tgtctcctta ggtcattgtt
      421 cttcagattc acttgtttta catggaatat aggctagaaa atctagactt cctttggggt
      481 gttaattaag aggagcatcc aaaattaatc agcaaattca ctagggcgaa ggggagctgt
      541 ctgaaggcct cgatataaaa tgcgcttcta gtgcagagaa atgagccttc ggctattgac
      601 aaagagaaaa caagtgcaca gacggcaatc tgacataaaa attcatatac gtatacaatt
      661 ttacattcat tttccttgtc agcttgtcac ctttaattat aaaggttgat tcgctatttg
      721 gcagatctgg aaattgtaaa cgcttggcca tttgaatatc atcatatggt caatgtcttc
      781 aaaaaagaat gacacaggag cataccagga aaggaacatc ataaaatcca aacgaaactt
      841 ctctgatgat caccttg
//
LOCUS       KCKM01001127             871 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17896apa ultra-conserved element locus
            uce-2920, sequence.
ACCESSION   KCKM01001127
VERSION     KCKM01001127.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 871)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 871)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..871
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17896apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>871
                     /note="ultra-conserved element locus uce-2920"
BASE COUNT          303 a          158 c          140 g          270 t
ORIGIN      
        1 ttagcatcac tatagcctag acggacggac gtatttagaa aacgtagttt ttcttgaaat
       61 ggagaatgcc taagttaaat gaatttaaat tcttagtatt aataatactt agaacactat
      121 gttgaattta ggagatttca ttttcctttt aatacaaact tatgtaaatc aggttctttt
      181 aaatcctaca cggtattctc tgataacaag ccattacttt gacattcctc ttaatgcact
      241 tacaaacaaa aattcatcag gagtgatatc taccctaaga tttgcaagtc agtataagtt
      301 acttcactta aaactgaaag acagtgtgaa agatggagaa agcattgcaa acactttatg
      361 aaaagtattt ctataattct agtgtaaaag ttattgcgat actgagaact tacggtctgc
      421 tgttaaggtg ctcctgttac aaaccctgta gtctaccatt tgtaaacaca tctttctgat
      481 gtttctgcca acatcctggc aacaaagcag tgcaatttca aataagctaa ttaacttaat
      541 tgttgatgaa gcatgaaaca gttcattcac cctgttagct gcaccatgac aacataagag
      601 tctcagcccc tgaagttact catctatata agcctatctg tagctttcca ttaagatcta
      661 ttgcatgcta aaatgagtac gtctcttctg acaaagacca gtccataatg tacataggca
      721 gaaaatcagc accattgctg aaaatacaaa tgaacgcaga aatactagtg actactttaa
      781 aaaaagcaag agctgtctca cttattttct aaacgctctg atttagggaa tagctggtaa
      841 aaaaaaatgc tgaaagtgaa aatttctggt a
//
LOCUS       KCKM01001128             581 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17911apa ultra-conserved element locus
            uce-7756, sequence.
ACCESSION   KCKM01001128
VERSION     KCKM01001128.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 581)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 581)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17911apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>581
                     /note="ultra-conserved element locus uce-7756"
BASE COUNT          130 a          156 c          138 g          157 t
ORIGIN      
        1 tcccgccggg gaacattcaa tcctctcttt gatggacgtc caagaaaata cttcttccac
       61 atcctaaact tgttagcacc agttaatcat cttaaccttc ttcccctctg aacgcacact
      121 ccaatgagtt tcccatcgct ggcagccgtt aaagacgcag caacgctttt tgcgtcggcc
      181 tttgcaggcg agcatgcagc cattaattat taaacatccc gactgtctcc caggtgaggg
      241 agcagaagga tgtgtcttgt gctggaactg cctcagattg actgtccagc ttgttgtttt
      301 tgcgggtgga tgtgctcgac gcagctctcc ccttccagga gctgaaccac gtctctctgc
      361 ttctgtgcct ctctctgtga tgttcatgaa tgctgtgaaa cataaaccct ggaaaacatt
      421 ggcctgcatc ggagcaatgc tctgacacat cctggatgaa tgtcacgaaa tgccagtagt
      481 atgacagtca gagggttgga gggacacgct catgcgcagg atctgaaggg ggctatgtcg
      541 tgacacttgc tagccgggca tctacccttc attttatctg g
//
LOCUS       KCKM01001129             412 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17927apa ultra-conserved element locus
            uce-76, sequence.
ACCESSION   KCKM01001129
VERSION     KCKM01001129.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 412)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 412)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17927apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>412
                     /note="ultra-conserved element locus uce-76"
BASE COUNT           96 a           93 c           66 g          157 t
ORIGIN      
        1 acatcctttt tggtttttgt cttccttgtg cttcatcttt gtcttaactc agtctcggtt
       61 ctttctctct tgtttttccc tttgtcaaca tattttccta tagtcttttt tgtgcatgtg
      121 tctgtctctt cctctctgct ctcccttctc tacccatcct ttatctcttt cccactcttt
      181 ctcttttttc caattccatt agcgaaagta gataataact tgtgaattca agtggaactt
      241 catttctgaa accgtacact cgtgctggaa cccattaagc tcgatagcga gaaatgagag
      301 aaatcataat tatcaggcca gtaaaataca tgaaacataa aatttgtcag ggaaagtaat
      361 tgaaattatt ggagcagttg ggtcctggtg ctgtgcagac cctcagtgat aa
//
LOCUS       KCKM01001130             617 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17958apa ultra-conserved element locus
            uce-3472, sequence.
ACCESSION   KCKM01001130
VERSION     KCKM01001130.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 617)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 617)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17958apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>617
                     /note="ultra-conserved element locus uce-3472"
BASE COUNT          188 a           89 c          103 g          237 t
ORIGIN      
        1 ccttgggtct gatcccaaag ctgacaggaa ttttgcgtga agaagtgtca ggtcagaaag
       61 gtttttttta tacaatctta tgtgtgttta aacaataaag tgaattaagt attactttgt
      121 aaattatgtt ttttgcatca tgatttaaat tttatttaaa tatggttttt tgtatttagc
      181 attattacac taagccaggt taagccaggc ggtgttgatt atcattaaac tgttatttat
      241 ttctatttta ttaagcctct ttttacattc atgttacagg ttaatttata cttttatttc
      301 atgcactact tggctttact gattaatatg ccccatggca ttcaataaag ccaggcagtg
      361 gaggaaataa gagtggtatt aatttctaac attgctataa atttgcctta ataaaactag
      421 ctcaataaca ctgcagtagt aatacaatgg atgcttccaa attgttagca aagacacaac
      481 tgaaagaaca atgcattttc ttctggattt taaaaatgct gtgctgtctt tttactagtg
      541 ttcagattag actacctgtt ataatgctaa gtgctcttac attgtgtcct aaactgtggt
      601 atatattttt caaaagg
//
LOCUS       KCKM01001131             783 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17974apa ultra-conserved element locus
            uce-5898, sequence.
ACCESSION   KCKM01001131
VERSION     KCKM01001131.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 783)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 783)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..783
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17974apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>783
                     /note="ultra-conserved element locus uce-5898"
BASE COUNT          238 a          159 c          158 g          228 t
ORIGIN      
        1 tatgaagggg ccaagttgta gttcaagtaa tacctttctg aggaaatgta ttgattgggt
       61 gacacccctt gaagagaagt gtgtaggcag tacctggaag gtgattccca gcagtgctaa
      121 atagaaaatt tgcaatttcg tttttcccag ctctggacag aggacatgtc cttttgctta
      181 tcccagggca cctccagccc tgggatgtct cacaggctgc agcaatgctc cctgtagccc
      241 caggagtcag gagtcaatgc tatttgcaca gttgcactct gattagctct gcaatgcctg
      301 taaccttaga gtagtaaacc agtggcatat atatagttga acaattatat gtattgtgac
      361 taaatttccc cccgaagatc tcattcacga tgttagagtg aaaggatcat aaaatgaatt
      421 aatagctgat tcactgtata atttcctagt tcaatatact ttagtgtacc agctaaatga
      481 gccatacaca gcattcagct cggccagtta acagctttat cattgagatc tcaggcttag
      541 aaataaaagc aattcttctg aagtaattgc gtctaattaa aagaaacatt taaaaagtgt
      601 aaccaaaagg aattcatttc gaatggaaaa ttaatgctga aaaatagccc tgagctctct
      661 tgtctttgct aatagctaag cattctcgga ataattaaac tcttttgaaa tgttgatacc
      721 tttctctgtt aaaaatgatg gccatggccc caacgcatca gcaaaccctc ggtatggccc
      781 tgg
//
LOCUS       KCKM01001132             846 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 17990apa ultra-conserved element locus
            uce-837, sequence.
ACCESSION   KCKM01001132
VERSION     KCKM01001132.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 846)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 846)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..846
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17990apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>846
                     /note="ultra-conserved element locus uce-837"
BASE COUNT          240 a          162 c          170 g          274 t
ORIGIN      
        1 gaggaggttt catctttgtg gaggatttcc atgcttgtct gtgtgtggta cagtcacaac
       61 tttaaatgtt ttttaaatgt agttactctc tttgatatca agggactatg tgttcagata
      121 tacgctcaca tgtccaacta actgaaagcc tcaatttgtg agaagaagaa aagcgaggct
      181 ggggacactg tacaaacggt gtttacacca ctgaagtgct tttgaaatgg aaagactctg
      241 catgaggagg cttgcagcta tgccacagcc ttgctgatac cagtaaggag ctcatcttca
      301 atgtagtgtt gaacgtaggt ggcaaaactg taatttctct ctttttttaa aactattttt
      361 tcttctttta tttttgaaat tttcatctaa gcggcagttt cttgtactat agtgactcct
      421 gctgggagag ttaagttgaa gtagctgaag gtctcttaca gatatatcaa ctcccggcca
      481 gtaaaaagat gtcctaaacg caggagatgg agttaaactg ttcccctacc ttggacgcaa
      541 tggcttcttt catcactaag aacaaacccc taggttttac aattgagact gagaaactag
      601 tacagtactt gtacaatttt tgatctacag catcacgacg tgaagctgca acaattagat
      661 gtaaagggtc cattcatgag gaataacatc actttgaccc tttgtgttag ctcctactgc
      721 taatctttcc atacgcgtga acttactttc aatttgaaga agatgaaaaa gtcttttgca
      781 aaaccccaat actgttttct gatctatgta cctgaatgta gaaacgtagt cttacctcgt
      841 tttttt
//
LOCUS       KCKM01001133            1204 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18006apa ultra-conserved element locus
            uce-5383, sequence.
ACCESSION   KCKM01001133
VERSION     KCKM01001133.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1204)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1204)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1204
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18006apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1204
                     /note="ultra-conserved element locus uce-5383"
BASE COUNT          364 a          233 c          241 g          366 t
ORIGIN      
        1 agttatctag aggagaaaaa aaaatcaatg tgatgtagaa aatgacaaga gtaaacatgg
       61 aaattaactc ctggcacatc ttttgttctg ggctgttata ctcatattaa gattggccct
      121 ttttaatagc tttcgaaaga atttcttgca taatggcatt ttagtcatca tgttaatgtc
      181 agcaaacaag gcagattaat gcttataatc ctgagctgtc tcacactctg cttattagaa
      241 ctgtaggcag atcttcatta ggatgaatga catctgaatc tataagctcg tcacaacaga
      301 ggcaccttct tgctgtggtg tcaccctgca gatgacaatg tcggccatta tgaatgacac
      361 tccacaattc gttacttcct gcctcaaatt gcagttaatc tttcatccaa actgtacaca
      421 tgtgcagctt taagtgggct atcacagcaa gtacccagta atgctgcaag cacatggaga
      481 atgacagaag gtaaattgct tgtcaggagg tctgtatttc aattcacagc atattccaaa
      541 cacgttgtgg tgaaagctct ccacaacagc tgctttcatt gctaactatt tttgatgtaa
      601 atgtcaataa agctccaggc cctttcatat ttttggccaa gactgtccat ctttccctat
      661 gcaggctggc aggttgagct ccatttatct actcttagga acatgtccta taataatgat
      721 tgtctctgga gaccgtttag agtgattgaa agcagtgatt gggacaatag gctgctgaat
      781 ttcattgctg gattgggttg acaggtgact gcttttatat cctctaatct ggaatagatg
      841 gaagtaaaaa tgtggttata tctaaacaac agacaggcat ctactgattg caaatctata
      901 ccttcagctt gtccttctca tcagaatgac ttaaccacaa attattacaa gactctcata
      961 tttctccagt ggtcagagag tttttagaag aggcaaagat ggagcagata cgtgttgcct
     1021 cactaggagt gagaagcagg gaaagaacaa gtcacaggct gtatagctct accagtagaa
     1081 acaccagctg ctgcttttag tagctgcagt taagatcttc attttgctta atgaaaatcc
     1141 ctggatgtta cagaaagaag aattttcatt tttaatcaaa ggggccatga attttataca
     1201 ttgc
//
LOCUS       KCKM01001134             826 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18022apa ultra-conserved element locus
            uce-7427, sequence.
ACCESSION   KCKM01001134
VERSION     KCKM01001134.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 826)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 826)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..826
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18022apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>826
                     /note="ultra-conserved element locus uce-7427"
BASE COUNT          282 a          106 c          156 g          282 t
ORIGIN      
        1 ttgtttggtt tatattttgt tttcagtttt atagaaagaa aaaaaaaacg ggggaagttc
       61 aggatttttt ctacaagata taaaactcca atgatctagt ggtgactaga gagctgtgaa
      121 aaatacccca ttaggagatg atgggctaaa cgtaggtcca tttctcttag acaagtagga
      181 taacctttta agacgcatgg aacaacgggg aaaactaaag ctgacatttg tttccaagaa
      241 attctgtaag aaatatctat ggcagtggtt gagaataatg tacaaattaa tgtgtttgaa
      301 acttccattt ctttaaactc ttcagtgaac ggtacacttg tgttcagttt tatgatcaaa
      361 aacaaagacc aaagaaggcc aacctcattt gattgtgtat attctgcctg tcttaattat
      421 caatagctgt aaggatacag tgcaagtgat ctggtaacca gtggttctcg tccttttctt
      481 ttagggggaa aaacaacttt aaaatgtata atttattgct cagcaataac catgttgtta
      541 aaataataat aataaaaaaa aggaattagc aacatgtctt aatttcccaa tagcattatt
      601 atatgttgta tttcagttta ttgtatattg tgtttctgta tttatttgtg tttggaggtc
      661 ttgctatgtc tttttgtgtt taaatgctaa taaacaagga cagtgtgtaa gagtgtagaa
      721 tgccaaactc tgaaatgcta aactgtgtta ttaaaggaaa aataaatcta agtaggaaat
      781 catatttttt aaaaaaaaca aactggtgtg ttgaatttga atggct
//
LOCUS       KCKM01001135             550 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18038apa ultra-conserved element locus
            uce-2861, sequence.
ACCESSION   KCKM01001135
VERSION     KCKM01001135.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 550)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 550)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18038apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>550
                     /note="ultra-conserved element locus uce-2861"
BASE COUNT          167 a          128 c           95 g          160 t
ORIGIN      
        1 tttcctacac agacacagaa tttatataaa aggctttcct cagctttcat caaatctagg
       61 ttgcaggtcc atttcgtaac attaattctc tccctcacca accgccacat caattcagta
      121 ctttataaac tatttcaggg atccgattta tcaggcctga cagagcttca cactgaaata
      181 aacagcactg cctctgccga gctcgctcag tggctcctat ttatcattat ttaattcaag
      241 ggcctaaaat tctctgacat tattaatagt aagatgaatc actggaaaac tacagaatct
      301 gtgaccaacg aggctgaaat aatccatttt ggtgaaaatg tctatgtgga attgcattcc
      361 ctgatgggta gctgctctgt cattagcaac tccatatgca tgggtggtga ggaactgaag
      421 catgaagtcc ccaaagagtg ggatgcttcc actgccattc tcttcccaac acttaacacc
      481 agagcagaat atcaggaaat acagcacagc tctaatgctt ctgtcagttg aatttaaatc
      541 tactaattta
//
LOCUS       KCKM01001136             482 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18054apa ultra-conserved element locus
            uce-6291, sequence.
ACCESSION   KCKM01001136
VERSION     KCKM01001136.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 482)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 482)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18054apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>482
                     /note="ultra-conserved element locus uce-6291"
BASE COUNT          167 a           94 c           89 g          132 t
ORIGIN      
        1 gaggagtcgg ctattagacc ataaaaggct cgtgcagatt aggattcaaa cgcgtaatta
       61 agaaagtgag aaaggtaacc tcgctttatc cagtaattag cgctgttaga aataggatac
      121 tgtctcttaa aagtgttaca aatataccgc actactaaat aacctgcact gctgggaaag
      181 tatactcgct atcaagggca aagctgctat acactgaggt aacagtaaat gacagactgt
      241 tgttcaagtc cattagctgc tatgtgatag gagcacattc actagcacac gacctgtgaa
      301 aaatcttaga tctctttaaa tctttgaatt ggattgctgc attaattctt aagaactgca
      361 atccttcaac caagtcaaat taccctcatt aacaggggaa aaactgcctc tgcaataagt
      421 taaaaaaaaa aagatattta ttacctataa tcactttcac gtacttcacc tggaagtgtg
      481 ac
//
LOCUS       KCKM01001137             704 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18068apa ultra-conserved element locus
            uce-1634, sequence.
ACCESSION   KCKM01001137
VERSION     KCKM01001137.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 704)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 704)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..704
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18068apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>704
                     /note="ultra-conserved element locus uce-1634"
BASE COUNT          241 a          111 c          121 g          231 t
ORIGIN      
        1 aatgctgatt atagggtaca ttcttttgtt gggatctatt caacataaac tgaaaaattt
       61 aacattttac ttcctagaaa gaaggatgaa taaacaagca cagactattt cataagatgt
      121 gtctgtcctc ttctgaatca gaactccagg tttaaataat aaattaagca tagtctaaaa
      181 tgcaaatgaa gtttctctca ataacaccgt gagctattaa gagaaagtgt aaagggttat
      241 gataatttta aagtattatg aactacagaa aacaaataaa aagcgttttc agtgaatatg
      301 tccaattcat tgaactattc tctcaatcca cttaactacc cacatgtgta caataatgat
      361 ttatagacat tatacctaat tatgcatatt tgggctgtgt tagagtgcct aacaaaagct
      421 ctagaaagca acaattacct ctgttgctta gctacatagt ttaaaatatt cctattaagt
      481 gcagattatt gtggagggga aaagggggac aaaaatgcac atgtgcacca caatgcattt
      541 cactttactg ctgccaaact gttagcattt tgggtcattt ccagtttaca taattgtttg
      601 gttcaactgt ttgttatatg ttaaaagaaa atattgatta attcttattc ttcttcagaa
      661 aattgggctc atgcagggaa aggttgcctt gtgcactgtg tgca
//
LOCUS       KCKM01001138             515 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18082apa ultra-conserved element locus
            uce-25, sequence.
ACCESSION   KCKM01001138
VERSION     KCKM01001138.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 515)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 515)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18082apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>515
                     /note="ultra-conserved element locus uce-25"
BASE COUNT          185 a          101 c           83 g          146 t
ORIGIN      
        1 cagccctata ttgtaaatct attatgtctg tccagaatga gtaatttgca cagagataaa
       61 cacatcccag gtagggccaa aacatgttag taaataaaga caaaaataac atatgcatat
      121 attttaaatt taaggaatat tcaactatta atggatatca aaggaaaggg aattttaatc
      181 atctctccat tcagtctcag ttgggtaaat catatctaag agatttgcat aaatataaac
      241 catcaaagac ttttcatctt caaagggggt ttcaagaccc tataagcttt gtactgtaat
      301 catcgcaggt cacaaccctg caggaataag gctgctatgg caacataaaa aactaatgct
      361 taaggcttag cataatattc tgactaatag aaaggaaact cattttaaaa gctggcagcc
      421 tatttaccag aagctggatt agaggtgtta tttccccttt tagcttcccc ctactgcccc
      481 tccccaaaag aaggaaaatc taatcaccca gatct
//
LOCUS       KCKM01001139             299 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18097apa ultra-conserved element locus
            uce-4681, sequence.
ACCESSION   KCKM01001139
VERSION     KCKM01001139.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 299)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 299)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18097apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>299
                     /note="ultra-conserved element locus uce-4681"
BASE COUNT          110 a           39 c           53 g           97 t
ORIGIN      
        1 caatacaggg aaaaaagcca atttcatctt tattagaagg agatttctct tttagtaata
       61 agcacacttc aaataattag cgtgttttac gtaataatga aattatggaa atgcaggcca
      121 cttattcaaa caagtcacca ttaccatatt tttaaatatt agacttaatt agagtttatc
      181 acttcagaga agtacgagga gtggagattt tttttaaatc ctcataaagt gtttattaag
      241 agcgggtaag aaggggataa tgatctgttt ggaaattaag gcaatcaaac atttaatgc
//
LOCUS       KCKM01001140             691 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18113apa ultra-conserved element locus
            uce-1802, sequence.
ACCESSION   KCKM01001140
VERSION     KCKM01001140.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 691)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 691)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..691
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18113apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>691
                     /note="ultra-conserved element locus uce-1802"
BASE COUNT          198 a          125 c          158 g          210 t
ORIGIN      
        1 atctcgccgg ctattaacta ttaactaaaa gatgccacgt tggctaataa agctgatgcg
       61 ttgttgcctg atgctgtttc accaggttga gtttggtcgg gatgatccgg ttaccagcct
      121 cgcgcggagc gttgaaaggg ttaaaggcaa taacggtgcc attaaaaatc cagcttgcca
      181 atgagctatt ttgtgcgagt ggtataaata taagatacac ttgtctggct catttgcttt
      241 ttgacttctt tcacacaact ggtgtttttg tgtttaattt aacaagaaat gagtagtaaa
      301 tgaaagctgc tgcctgaaat cccactgtga gcgtgttttg cacttggctc cccagtgaaa
      361 aggcaatttg tgaaattatg tgatagagta attagatgaa gccagggctt ctgattgttg
      421 ccatgcttat gtggtaaagg tttgctgggc gaaaagaaag caaccacgga ttattaccct
      481 ggcaagttgg ctcaaagctt cttcatttat ttgtaaacag aatatttagt gaccgcatag
      541 gaagtagctg taatcaccag ctcataaaga aaccacagca gagcttttgg atttttacag
      601 agtgctcatg taaaatttaa gctgggaggc agaatccctg ttaatgtaat taggatctaa
      661 tttaccaccc tttgcacaca gatgtaataa t
//
LOCUS       KCKM01001141             950 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18127apa ultra-conserved element locus
            uce-3632, sequence.
ACCESSION   KCKM01001141
VERSION     KCKM01001141.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 950)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 950)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..950
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18127apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>950
                     /note="ultra-conserved element locus uce-3632"
BASE COUNT          247 a          210 c          143 g          350 t
ORIGIN      
        1 gttctttctt agttcatctg cagagaggta ggtaattttc cttctgtaga aaaaatgctg
       61 aaggaacctc aagaacataa acctgaaaat gttccagcag agcttgctga ataggtagca
      121 aaaaatatcc gctcaaaatg tagtcattca aactcctcat ctgagatccc tttttagaga
      181 tatttttgcc ttcctttttc ccctgttttt ttccacatgg gtaagcaagc aagaaagcct
      241 aaccaggttt cttccctcct gcaccccatg tttactcctc ttgttaaatt ttctctttgt
      301 ctatccatat atttgttctc attctcagca gaaaaaccta tgaacctcga agacttttaa
      361 ctaaagggtt ttttgctttt gctttggtgt cagttgattt cttatcaaag tgtttgattt
      421 gcaatttttt tcttgtcgtt tgcagaagcc gaaagcggta tgccctcttc gttacctttc
      481 cttccaacct caatcctacc tccactcctt ctaacttcag gactaattcc ttgccaagaa
      541 cacaggaaga taacatcttt gtctatcttt ctctgtatat acacacatat atatacacat
      601 atatatattc atctatccat ttgtatatat atatatttat atatctgtgt gtatagttat
      661 atatgagccc cctatctcaa agaggagaga aatagcattt tgcctctcca ttggttcttg
      721 tgactcacgc actaacttct ttgcaggaag aacaaattta aacagtacaa gttttttagg
      781 gcccttgtgt ggtctcattg gtgtatcaga ttgttgcatc tgaaaaacag agtttactgt
      841 taacatctcc cctcctcttt ttttcatttg tactgtgtca tgacgatgta tatttcgtct
      901 ttaccagccc ttgtgctgcc atattgtctc catattcata ccttcattga
//
LOCUS       KCKM01001142            1081 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18141apa ultra-conserved element locus
            uce-2849, sequence.
ACCESSION   KCKM01001142
VERSION     KCKM01001142.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1081)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1081)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1081
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18141apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1081
                     /note="ultra-conserved element locus uce-2849"
BASE COUNT          298 a          205 c          241 g          337 t
ORIGIN      
        1 atcttaatat aaattttgcc cgttccttct tagaagtcat ttacatcaaa cccacaagtt
       61 cctatatgcc aggaatatga atagcagaga cctgtgcagt tttgtttcat gtaaaatgca
      121 gtgtagttaa tgttaccaaa taccacagat ggaaataaaa tcgcttgctg tgtcagttgc
      181 cttgctagaa attaaattaa attgatctat tacagtgcat aagggggaag gctttcctgt
      241 tgcctttctg ctgtgtactt ggccaaataa gtttttgaca gaactgttgc tgcgtgtctt
      301 ctgggaagtt aaagggtgag aacgcaaaca aaggcgaccc gctgcctcgc cgggcccagg
      361 cgcaatcctc tttcccgggg aaggacatta ggagaaaagt aaatcaaggc gatctgatag
      421 ggaatggggc tcctgtcact cagaggcgag atattgtgct gtgtccatat actttgttta
      481 ctgtagggtt ttatgagttg taacctgccc atgcaagctg ttaatgaggc taaatcttgc
      541 tgcttgagga ttgaattaca gcacacctct gggctaatgg ttataaacag aaagtcccat
      601 tagggctgca ttctgattca gttatttgca ttttttctat tgtgccaaga acaatgctga
      661 gtaaatagct acaaacaaac aatttgcatg gaaatggata aaatgtgcct aattagtatt
      721 ttgtgcttgt cttattaatg attgcctaaa ctaaatagca cttagcagca gctctcatga
      781 gcatctgcag gtgtgggatg ctcagtttct ggcttggtgg gaaggctgcc aggacagctc
      841 tccaaaatta ggcagtttat gttccactta gtatgagtca actgcctgta cctggtttgt
      901 atcctggtca ttacatcaat gataggaaac catcggcaga tctgactcaa agccaagcgc
      961 tgactttttt ggcttttgag catttctaat attggaagaa cagtcctgac tttgtagttc
     1021 ttagggtgaa aactgaaatt gtttcctttg ccacttagtg aattcttaca gatatcttta
     1081 a
//
LOCUS       KCKM01001143             943 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18157apa ultra-conserved element locus
            uce-7692, sequence.
ACCESSION   KCKM01001143
VERSION     KCKM01001143.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 943)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 943)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..943
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18157apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>943
                     /note="ultra-conserved element locus uce-7692"
BASE COUNT          293 a          194 c          191 g          265 t
ORIGIN      
        1 aggaaaacaa aaaagggaga gagagagagg aaaaatcttt tcctgtttct tccctgaggc
       61 tgaactgttt atcactccat ccttgttcga tagaagtgaa ttttataata aaattttccc
      121 taatcgggct ctgtcagtga ggtgtcttat cgtggggagg aaaatgacac cgatcctatc
      181 gaaaaacaga gacgatgtca cagtgtcccc aatcacagct actcagcttc catatctacc
      241 ttctccacaa acaccaagca ctgctttttc ataagaacat caaaacctag cgaagtcatt
      301 aaaattgcac ccgcgtagag ttgcagggat cagccgcact agcgcaaaat gggatgtggg
      361 aaaacagact ctctaaatgt gctaattcca ttgtcacgtg tttacggctt aattttaatc
      421 agttaaaaaa gccacacatt gcaataaatt ggcattatct tctgtgacac cagaggacac
      481 agttggttca aggatttaga gggtcgctgg caacagtata tagtgttaca gacaaagtat
      541 ttttacgctt gaactacggt agctaaggtg caatccccag ttaagactgc aaacaaagac
      601 tataacccac acagtactaa gttcaacatg cagaccacct tcagcctgga gacggtgtag
      661 aatgctaaac tgaatattgc tgaggaacat tttctaattt aacggttaaa ggtaatttgt
      721 tggccggtat ggttgaagtt gcagttcagt agcgttctct tatgtgtcct gtagtgtaat
      781 gaagaaaggt ctattggaaa aatccctttg ctgtatttac attcagtttc taaactgatg
      841 gtacttgatt acattgtgcc attaatttct tcctcagaaa tgcgcattgc atgttctatt
      901 cctctgctca cggaaacgca gataaatcag ccaacacaaa ctg
//
LOCUS       KCKM01001144             513 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18172apa ultra-conserved element locus
            uce-4939, sequence.
ACCESSION   KCKM01001144
VERSION     KCKM01001144.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 513)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 513)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18172apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>513
                     /note="ultra-conserved element locus uce-4939"
BASE COUNT          168 a           92 c          114 g          139 t
ORIGIN      
        1 gaggggagtg aatttgtgtg aagagtgaca gaacactttg tccagcgcag ctttggctgg
       61 ttgtaacaag cgtcaggaca ttagacgcaa caaaagcagg attggcagta tcatcaatca
      121 cgggtctgac agttgacttc agtttgtttg ttccactctg cataataagt gattggatca
      181 ggtttaatta gatattgggt aatcaatcat tgccaacaag gcaacccagc ttgggatcta
      241 gatgctgcaa aggggaggga gaaaaccaaa tctcatccag ggtgcataaa tactcaaaca
      301 tataagcaca tagggtgaag cttcagagga aaggtataaa gatgtctgca agatggcaca
      361 taatagaatc attcacatct gtactacttg ttaccagaca tctgcagttt gacattttac
      421 tttcgctgca taattacttt tcaatataat ataatatact gacctgaggg agaaagacaa
      481 agcaattaaa ttatgcataa gatcgtttcc tcc
//
LOCUS       KCKM01001145             802 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18188apa ultra-conserved element locus
            uce-1313, sequence.
ACCESSION   KCKM01001145
VERSION     KCKM01001145.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 802)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 802)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..802
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18188apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>802
                     /note="ultra-conserved element locus uce-1313"
BASE COUNT          237 a          158 c          164 g          243 t
ORIGIN      
        1 ctgctgaaca atgcagtttt gaattcaatt aaagtgatta tctgttgtgc caaataaatt
       61 gtgtacagca tatatcctgc agcattttac acctccaggc tcattatttt cgaactgttt
      121 cctcctgttt atgcgctctc aaattaaatt gctgataata tgcgccaaaa taaaaaacga
      181 gcgcaccttg tccgaagaaa attgattctc ctttttctga accgggcgat tgccaggttt
      241 tatatactcg gttcctggcg atcattagta attcaatttt ctttttatta gcccccttat
      301 ctgctgagca atatagtggc agagctgacc tctttcgcac gggtaaatgt ttaaaatctt
      361 ttccctgatt aattttgcca gttaaggaaa agaggagaaa tggcccggct cttagccatc
      421 acaatgaata aagcttaatg ttgattgtga tggaatttct aatgccaagg aaattgattg
      481 aacgcagcaa ttacaccgca atagtaactc aagggaaatg ggatagtttt ctcctggcca
      541 tagccttttg gttatttaaa acaatccaat ttgcaaggat aattatatat tagtgtttta
      601 tctgccactt gaaatgaaca tgggagtttt gataccggcc cagcattagc aggttattgc
      661 tgcaaattac ttgatatctg ctttctttca cataaagacg aaattaggcc atcaataacc
      721 agaaaaaggt ggaatgcgag gggcacgagt gccctctgca gggctgcggg gaaggaaggg
      781 agacacgagg aactccccca aa
//
LOCUS       KCKM01001146            1103 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18203apa ultra-conserved element locus
            uce-692, sequence.
ACCESSION   KCKM01001146
VERSION     KCKM01001146.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1103)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1103)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1103
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18203apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1103
                     /note="ultra-conserved element locus uce-692"
BASE COUNT          372 a          157 c          203 g          371 t
ORIGIN      
        1 gaaaagggct ggagaatcag gaagttgaga cagaacatct gaaacttgaa tgcttttaaa
       61 gggtgcttgg agaagttaat gactagattt aagaagctgc ttatggtaaa ataatgcaaa
      121 gcatttaata gctcaaatgc aactttggga aattatagtg cctggtgcaa gaagtttctt
      181 gtaaagagtt ttctgtggga aatgcttggt tgagtcaatc aaaatacggg ataactacta
      241 cacattttat aattttgcac atgacagtca ggatttcatt ccagtaggtc atttgattct
      301 ctgcaggtgg ctctggtggt ttctggaata gtataatgtg aattacatgt tacacaaatg
      361 aaaggcagtt ataattctgg ataacattgt atttgattct gcaaacatct tcaggcctaa
      421 tgcaaagatt cctttgaata atttatccag ctaagtatct gtggtcccaa actcctaatt
      481 taaaaatgtt gataaatgaa gtatctcttt agctaataaa tgaagtatct ctttagttat
      541 cctttgtcag caacattcat tttaatggaa agtgagttta cagggttaca tgattgaact
      601 actgagccaa gtcagtgttg gcaaatgatg ggctaaatta ttgatgttac acactaatga
      661 attctgatga gaaataaaat acagacatta catttcaagt ggttcataat tatttttgta
      721 ctttaaaagc aattttattc tttttccaaa tcatactggt tctgtaaaac aaaaacatag
      781 ttagtgatta taactaaaat tattatgttt gaggcaaaaa tgctcctgta agttttctta
      841 tgcaagcata atgctattca cactaggatt ctgatttctt cttacacttc tgggagagga
      901 taattaaatt aaatgtctaa attttttaac tgctgtcttt aaataaaaga atcttctttg
      961 cagccatggt taagagttcg gtagatgagt ttataatcta tgatatatca gcatgtttac
     1021 tagagatgtt ctgaactacc ataattaatt caggtgacaa caaaaacaga agagctgcca
     1081 aaaccgagct ttcaacatgt aaa
//
LOCUS       KCKM01001147            1034 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18217apa ultra-conserved element locus
            uce-7009, sequence.
ACCESSION   KCKM01001147
VERSION     KCKM01001147.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1034)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1034)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1034
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18217apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1034
                     /note="ultra-conserved element locus uce-7009"
BASE COUNT          333 a          207 c          161 g          333 t
ORIGIN      
        1 ttatgacagc tagctactta taacttacaa tcagacttcc aaattaattt tttgcatgtc
       61 aaattatatt ctgatagcaa gaaaacatca gtaaaataat actgcaataa ctttgatgca
      121 ttacacagaa ctccacaaaa agatatggaa gttacctaga tacactaacc tttatttctg
      181 tatacgaaag gagtaaaatc ataaagaaac ttttgcttag atacaaatac ttgtttctca
      241 aaagatttga aaataccggt tactgctaaa ctgggatagt ttacctaccg aacacatacc
      301 gccattgaac gtaatttatt ccggagtcac agataaggtt gcgacgagga tgaagggaag
      361 caagatcttc catacaaatt aagctaaata actaaacagc atcactgcca aaagtatttt
      421 aatcaaacat tctattactt attttcagct tttaaggaaa tgttcagaat tgcaacttac
      481 caggattatg atgagtcaca gattctccat tttgaaatac atctccagcc acactcattc
      541 taccaggatt gaaaggtcct acaccaggct tggtctgtga agtcaaagat ggggtgtatg
      601 tttgcatatt aacaccaaaa ttacttgact gcagtccgtt agatacatct cccaagctgg
      661 cattctgcag tgatgttaca tgtgtaatca ttaagttcat gtcacgccct tcagcatttt
      721 ctaaatgacc actcactgag ctcatagcac ctgtttctaa ggtagtaaca ttagcaatct
      781 gaatttcaga gtctggttct gtggttatac cactattacc tattcctgaa tttaccttac
      841 ttcttgaaaa actggaagct gagaattcca tatcgttggc tctattttta cactctggaa
      901 gtcttcgttc attaaaactg gaagcattct tctcctgccc ttgatttgtt tccatgtctt
      961 cttcatcatc aataataata gtttcactta tactcccctt ttgagaattt aagtcttttg
     1021 gagaagaaag catt
//
LOCUS       KCKM01001148             897 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18232apa ultra-conserved element locus
            uce-2247, sequence.
ACCESSION   KCKM01001148
VERSION     KCKM01001148.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 897)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 897)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..897
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18232apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>897
                     /note="ultra-conserved element locus uce-2247"
BASE COUNT          239 a          181 c          230 g          247 t
ORIGIN      
        1 gatacgtgcg aggcaacaat ttctctcttt attgcactcc tgagggaaga ctcatcttaa
       61 tacagcgcct ttgcgccggg tttgataagt tcttttatta aaaacccatc taaaacctgc
      121 ttttaggata atcccgcaag aggtgggggg cacacggacg cgggacatcc acgcgctttg
      181 agccgtcttt gggtggtgat gggaggggga taaaaaaaaa ataaaattac agaaaggaga
      241 tttttttttt tttgaataaa gaaggatgcg ggttatttat gttgctgcaa agtccttatc
      301 tccgcgtggc actaaacaag gatttgttgt gggatttgag agggctgtgt agtgcttcag
      361 tgttaagcac ccaaaactct gggggactgg cactaatttc ctctctctcg taaaacaacc
      421 tagtattcat aacaactcga gaggcttgac ataagtaatg atggcatatg caggcgaaga
      481 ttaccacccc aacagtgtaa tcaaggtgct aggtactaat gcaagttaaa ttgagacaat
      541 aatgctgaaa cttgcattgt gggattagga gagtacttga aatgctgaca tcggcagcgc
      601 cggcgagagc gcccgtcttc ctttcaattc ctgctcatcc ttaatgacct caaaatttgt
      661 acgtcgttaa caccgtgtac cgaagcggga gcgaacgagg gttgggaggg agaagattcc
      721 ctgccttcgt tgactttttg gctttcctgg taattggggg cccttcgccc gtcggaaaac
      781 tcctctcggt gcccgagaaa cggtgggaaa tcaagtcgta ttaaaatggg atgctcagat
      841 caatattgcg gcgcccaggt aattaaagtg ggtttgtttg tttggctcct tataaat
//
LOCUS       KCKM01001149            1124 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18248apa ultra-conserved element locus
            uce-4931, sequence.
ACCESSION   KCKM01001149
VERSION     KCKM01001149.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1124)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1124)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1124
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18248apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1124
                     /note="ultra-conserved element locus uce-4931"
BASE COUNT          340 a          193 c          222 g          369 t
ORIGIN      
        1 cctaaatatg tacttcattt ctgctatcgc atttctgcag tgatttttca ttctaatcta
       61 acaattctga caagcgatgc tggatacatt taaaattttt tttatttatt gtactgttga
      121 atgtatagtg acagaaaatg agtaagagtt taaggaagca attaatgttt taaaagccac
      181 agaaaagaga caaaaaagtt gggctagggt ggggaataag caacttgaaa gaaatatttt
      241 tggttttgcc aggtgcactc aagtatttcc aagtccttct ggtcctatta aataccaggc
      301 aagcacagat atggctggag cagcattggt tgttttgcaa tgctttactt ggctgcatga
      361 aaacagactt tatgttatcc tgtgcttatt gctggaattc ttctgtcagc aaacaggctg
      421 aggttataac aactgtttaa gatttgaaat atttttgtta agaaatctga catgatttgc
      481 tagttgtgac aactgatttg acaatgacca gtgatttagg tctacctgta ataagtgaat
      541 taatctgagt taaaacatag tgatctgtca tgtttagaga tacctcaaca gctggctgac
      601 ttgtcctctg tcaagctagt ttgtcctgtg caaatcttct gtcaagtacg gaaaagaact
      661 gttgagagaa aattacatgg cagttttaga gttagtgatg aatttttctc ccaacatacc
      721 agctgtgcca gcaacactat tttttgtggc attaatcaaa tgtcttgcct gcagcacctt
      781 cactttccca aaggctagag gatgaatctg tcaaaaattt tcactgggat ttgccaagag
      841 cttttcctaa gctcaggtac gagtccgtgc acctcagaaa tttgaataag gcttttaggg
      901 atgttgttct cagaatttaa aatcctgtag tgtaatttta ccctttgcat gaatacaaag
      961 ccatcattac agcaaacatg atgaaattaa ggagtctgcc ataaggccaa gtactcaagc
     1021 tttattaatg tattcgctga cttacagctc tgtgtttatt tttagttata gttctgcaat
     1081 tagcaaactg caagaacaat tgaaggccac agtgtgatcc agac
//
LOCUS       KCKM01001150             360 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18262apa ultra-conserved element locus
            uce-3227, sequence.
ACCESSION   KCKM01001150
VERSION     KCKM01001150.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 360)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 360)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..360
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18262apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>360
                     /note="ultra-conserved element locus uce-3227"
BASE COUNT          128 a           54 c           73 g          105 t
ORIGIN      
        1 gtaaaattat ccagaatgta ataataccat gttattgact taagcacagt tccctgtgac
       61 atgctgcagc tgacctgtaa tttttatcct acatgttgcc agcactatta aaatgacact
      121 tgtgaatgta aattaagctc acaaagggga cagattgtat gattctggtt tctctcagat
      181 gcctgtaggc tatcacaggt tccatatgtg aagtaattat gttcactgaa ggaaagaata
      241 aatgctgtca aattgtgtac tgagagagaa agcagctatt atattgcagt agtcactgga
      301 gcattgcctt agaaagtgga aagatgtata agaaaataat aataaaaaag aaaaactgga
//
LOCUS       KCKM01001151             669 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18278apa ultra-conserved element locus
            uce-2048, sequence.
ACCESSION   KCKM01001151
VERSION     KCKM01001151.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 669)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 669)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..669
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18278apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>669
                     /note="ultra-conserved element locus uce-2048"
BASE COUNT          198 a          122 c          145 g          204 t
ORIGIN      
        1 atatacttgc agcccctgga atgtatggct tttttgttga gtctcaagga aaatgaggaa
       61 aattcataag tcaacagata ttaattaaat gttaaagcca ggttttaaag taccttcaat
      121 atatattgct cctaatgaca ttcaagtgta cttacaaggg agatcagggg ggagatcttt
      181 agatccccct gggtctccca agatgccttt ccataaccaa atgctttcat atgagcaatc
      241 gaaagaaacc gttagtcaac cactggggag tctttacagc ctggctttga ttgtagtctg
      301 aatgcaggcc tgcgaacaag aggtgtttgt aagcgtttct aatggcattt tgatgtacat
      361 gtacaaaatt gatgttggaa ggatcattgt aaagtcccaa acagtggaat attgaggaca
      421 ttttcaggtg gcagtcagat tctggctggg tgagcccagt atattttctc atgtcacagt
      481 tgattaggtt cacagggaag tggaaagagt aagaaaattc tcttattact acagcaatgc
      541 catatcagcc tcttttccct ttgaatgcaa cattagtttt tgtccagatc tctaactgct
      601 ttctacagtt tggggaattg taaagcagaa acaattttcc cagctaggct gaccttcaca
      661 gtaatgaga
//
LOCUS       KCKM01001152             744 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18293apa ultra-conserved element locus
            uce-6165, sequence.
ACCESSION   KCKM01001152
VERSION     KCKM01001152.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 744)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 744)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..744
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18293apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>744
                     /note="ultra-conserved element locus uce-6165"
BASE COUNT          220 a          147 c          153 g          224 t
ORIGIN      
        1 aatgtgcacc ttattactgg aatagataga gtaggcctga agaactgccc tggcccagct
       61 gaagccatga gaggcatgct ttggtcctag caggtggcga cctccacagc ccaggtcacc
      121 tccagcactg aaagtcggtg ctgaaagcca ggacgaattc cacctgtctt ctggaaatgc
      181 agtgagtgga gcaaggggat ggagaagttt cattcaggga ggagggaaga gagggactaa
      241 ggagtgtgtg cacccacatg tgaagctctg acaaacagcc gtgtgattta tcatcatact
      301 cccacttgta actctaacct aacagtgtgt catctttact tttcatgtta tttatttaca
      361 agtgcatttt cagtatcaac cctttcattc attaatccta atgtggcctt tttcaatgtc
      421 tacttaccat tttaaatact tactataatt tacagggctt tcttgaacac atccaaggta
      481 tattatatgg ggctagctta atggaaagtc ttgtacacca aagcaggaag aaagcacatt
      541 taatttatgg tggctttgaa ttttgctcat aatttacttc tggagaacta gtcatataaa
      601 gccacaccaa tgagaatttt cagtggcaac ataggaggaa aaaaacaata aatgctgatc
      661 ttattactca tttttatttt gaaagctttc ccatgttgca ttctgggatt atgtaaacta
      721 cttataactt agcaatgtaa ttct
//
LOCUS       KCKM01001153             477 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18308apa ultra-conserved element locus
            uce-3614, sequence.
ACCESSION   KCKM01001153
VERSION     KCKM01001153.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 477)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 477)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18308apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>477
                     /note="ultra-conserved element locus uce-3614"
BASE COUNT           81 a           88 c          184 g          124 t
ORIGIN      
        1 ggagacccca ggaaactatt cttgatggaa ttgagccgtg tcctccatgg cattcctcca
       61 atgctggggc tggatggtgg tgttgggttg ggtgtgcctg ctgggctctc ctttggcgta
      121 tggacaggtg tccccttggg ggtagggagg ggacttcccc ttggagaggg gtgaggggtg
      181 acctgtatga tggggataga tttggtgctc gggtcagtac tagaagggag caacctaaca
      241 ggagacatag ggttggtctg cactttagga acggccagct gcgggttaaa gccggcggca
      301 ggcgagcggc cctgagcgtt ctgcacaggg ctgttctggg aagaaggggc gctggtattg
      361 ctggtgggga gtgggttgga tttagtagac tggagtggtt tttcggccaa tttgctcttg
      421 gatggcaaag tctgcgtctt tgggttgggc tgaagtgctg gctttggttg gagtaca
//
LOCUS       KCKM01001154             900 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18324apa ultra-conserved element locus
            uce-2841, sequence.
ACCESSION   KCKM01001154
VERSION     KCKM01001154.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 900)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 900)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..900
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18324apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>900
                     /note="ultra-conserved element locus uce-2841"
BASE COUNT          272 a          165 c          207 g          256 t
ORIGIN      
        1 taatgctcca gtcattgcat tggtaaatgt aaactgcgac gtagagagca atttgaagca
       61 gagagtgggg gttgtggagg aggaaaagtc agtctttaaa gtggcaggtg gtgggatggg
      121 ggattgggtg aatatgcact ttgatagggt gcaggtgggc aaaagtggtt ttattctgcc
      181 tttttcacgt tacagtgttg aaagaaggtg agattccttt gttatctttg gaatgactgt
      241 ttttatttgg acctaaataa acttttcagg tcttttatgt tgtatgaata agagtcttct
      301 ttcttatttt atacagaatc agattcagta cctcaagcaa gtccagcagc ccagtgttgc
      361 ccaactccga tcaacaatgg tggacccagc catcaacttg tttttcctaa aaatgaaagg
      421 tgaactggaa cagactaaag acaaactgga acaagcccaa aatgaactga gtgcctggaa
      481 atttacgcct gataggtaaa caaaacaaat actccccagt caagacttcc ctgacagtcc
      541 cactacgaga atgctatggt gggacagcca agtactcgtt tccacaccaa gactcagacg
      601 ttttgaggca aaagccacat tcttatactg tccagcttgt aatgcttaat gtaaaactta
      661 ccagatgaac cttgtgtttc agcttttttc tccccctttg cttcagaggc ctgacggcgt
      721 cggactattc tgaagaaatg gccatctgcg aaaaaaaatc ttttctagaa catgtagacg
      781 tttgcaaaat tgttctattt gaagaaaata gagggagaaa cagaagtctt aagtctgtgg
      841 cacactgtgt ttacagacag tttggaggag agagaaccta gagattataa atcatgaatt
//
LOCUS       KCKM01001155             463 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18340apa ultra-conserved element locus
            uce-2569, sequence.
ACCESSION   KCKM01001155
VERSION     KCKM01001155.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 463)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 463)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18340apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>463
                     /note="ultra-conserved element locus uce-2569"
BASE COUNT           93 a          149 c          164 g           57 t
ORIGIN      
        1 cgggacaagt cgaacctgta cccgggcagc gtgcaggcgg cgcccggcgg ggccgcgctg
       61 cgccccaatg ggcagacgaa gtcgctggtg ccgcagcggc tggcgctgga gtacatcgtg
      121 ccctgtatga acaagcacgg catctgcgtg gtggacgact tcctcggcaa ggagctaggg
      181 gggctggtgg cccaggaggt gcgggccctc caccacaccg gccgcttcac cgacgggcag
      241 ctcgtcagcc agaagagcga ttcctccaag gacatccgcg gcgacaagat cacctgggtg
      301 gagggcaagg aggcgggctg ccagaccatc cggctcctca tgaacagcat ggacgatctc
      361 atccgacact gcaacggcaa gctgggcaac tacaaaatca acggcaggac gaaagtaagt
      421 gcgggacccc cggcgcgccc cggcctgcag ccggtgcggg ggc
//
LOCUS       KCKM01001156             883 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18356apa ultra-conserved element locus
            uce-3007, sequence.
ACCESSION   KCKM01001156
VERSION     KCKM01001156.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 883)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 883)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..883
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18356apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>883
                     /note="ultra-conserved element locus uce-3007"
BASE COUNT          228 a          189 c          172 g          294 t
ORIGIN      
        1 tttaaagcag tttaaacccc agcttcatgg gctgtttgag atccgttccc aactgttctg
       61 tgactttctt aaatatgcca acagccattg ctgtgcgtga ggggcaggta agccaagtct
      121 gagtggctga tcttcagccc cagtcaggcg gccatatagt ccctgggatg ggtgtgttgt
      181 caaagccttc tgtcgtatat tgagaaactg taaaaataat gtaaaaaaaa aaatctaaag
      241 taccaccact tcagagaaat ccaggctcag gattttgact agagtatgat ctcttccttt
      301 aaaacctcta accaaattat tgagctgata agcgattccc cttggcttta catgtgctgg
      361 catgaattat ccttgagtgc tgcatattag ggttgttttg tactaaaagg tgttaaacac
      421 ttgtaataaa tatttttcct tatttcccct aggacacagt tccatctctg gttggtgaag
      481 cataaaaaag agctgtcatg cccagtttta ataggcaata ggatttcaag cccccagagt
      541 tgtttcacag tctggcagtg gccataatga aactggccac tgttgccaca agactttttc
      601 ctctcatgcg ttctcccctg ttacctccca cagctgcttg actggcaggt cttttgcaaa
      661 ctgcagacat atttacatta gagccgatag tatttcttta gctatctgtg ccatctttct
      721 cttttttttt ttcccccttc ctctgcctag ctagagattc aaccttaagt ctaattttaa
      781 agaataaaat taaattgtgc atgcaattat ctgcctttga gcacgaacag cagttcattt
      841 tcatgtgttt tgttgtgagg caaatagctt gtttgtttgt ttt
//
LOCUS       KCKM01001157             825 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18371apa ultra-conserved element locus
            uce-7871, sequence.
ACCESSION   KCKM01001157
VERSION     KCKM01001157.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 825)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 825)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..825
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18371apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>825
                     /note="ultra-conserved element locus uce-7871"
BASE COUNT          244 a          150 c          154 g          277 t
ORIGIN      
        1 ctcttactta tgctgatgag agttaaaaat aactctgctg atatcaataa agcatcagca
       61 gtatgtgtgt gaaagagaag aactgggtgc ctgatgtgtg taattgctga atttagagcc
      121 tttcctcgct tccttttacc ctggctcttt caaaaagtaa acctatggaa gaaaatgcct
      181 ttaacctgga gagtgaatgc agcctaagtg gttcagcaga gcacaattta atttaagaac
      241 ctagcattga tgaaaataga attgttaaaa aaagtaaaat aaaaaaaaaa aaacctcaca
      301 acctccagag aggagaaagt gaactaacct aatcctatta aacgtggtag catgtttctg
      361 tgcagctcgc tgagagatta agcacaggaa aagggataag tgctgcttca gtttcactaa
      421 actaatgtga caacttgtca ttggaaatct ttacagcttg ttagcagatg actagctgat
      481 tcagatatgt tttctaccat ttcctttgtg tctgggggtg gtgttttttt ctttcctgtt
      541 cctttcttat tcatactgct ttattttgct ttttaatcct tcatgtctcc ttcaagtcaa
      601 aacatttaac ttgctttaat caatattttg ttttgaagat gtcccttgac cttttgtttg
      661 tgcaaattaa ccttcaaggg cacctcattc attcattaac ctcagtggga tgccgtatcc
      721 cttgtacatg gcattttagg atgcataaaa catttatgaa tgtttagaca tatttcagtg
      781 aatgaccgtg atactgctgt ggttgctact actgctgcta caata
//
LOCUS       KCKM01001158             679 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18387apa ultra-conserved element locus
            uce-7592, sequence.
ACCESSION   KCKM01001158
VERSION     KCKM01001158.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 679)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 679)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..679
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18387apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>679
                     /note="ultra-conserved element locus uce-7592"
BASE COUNT          233 a          135 c          192 g          119 t
ORIGIN      
        1 gacgactctg aggaggaaga agaggaggaa gatgaagtgg cttacaaaag ggagcagatt
       61 atagtagagg taaaccttaa caaccaaaca ttaaatgtgt caaaagggga gaagggtgtc
      121 ccctcccagt ccaaagagac tgctgttctt aagaccagca gtgaggaaga ggaggagggt
      181 aacagtggga acgaggccac tgaagacagt gatgattatg aggaaaatga gaggcagaag
      241 aaaaaagaga aaagagtgga aaaagttagt gttgcacaaa ggaggacaag gagagctgca
      301 tctgctgcag cagccacaac ttccccatca cccagaacta caaggggtcg tagaaagagt
      361 gtggagcccc ccaagcataa gaagaaagct gcaaaggagc ccaaggcacc tgtgcagaaa
      421 tcaaagtgtg aagagaagga gactttaacc tgtgagaagt gccccagggt gtttaacaca
      481 cgctggtacc tggagaagca catgaacgtc actcacaggc gcatgcagat ctgcgacaaa
      541 tgtgggaaga aatttgttct agaaagtgag ctgtcccttc accagcaaac agactgtgaa
      601 aaaaatatcc aggtaggttt gctcacctgc ttgccagatt tccatacctt ctgtcgtgcc
      661 ctggatacag ctagcggac
//
LOCUS       KCKM01001159             713 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18403apa ultra-conserved element locus
            uce-3027, sequence.
ACCESSION   KCKM01001159
VERSION     KCKM01001159.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 713)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 713)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..713
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18403apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>713
                     /note="ultra-conserved element locus uce-3027"
BASE COUNT          229 a          139 c          141 g          204 t
ORIGIN      
        1 ataaatggtt gcattaaagg caggaaacaa ttcatgcctg ggacgactgc attattagtc
       61 acagcactga gacctctcac cccaagtgat aaagtacaca ggtcagaatt gacaatacat
      121 actcatggct gatcatggct gccagttatt gatccgagga gggggaaaaa aaagaaaact
      181 ttgcaggaaa aacattgctc tgaattacaa acacacgttc tcccgagact cagcaagtct
      241 ctgggtttct cccaccggag ctggaaagca agaagtgagt tcagccagta tttaatatca
      301 agtgaatgtg gtgtttaatc aatactattc tgcttttgtt ccacgatgtg gaaagcagtg
      361 tctattcatt cagtaaaggt taatgccaag ggtcaagtga tttcacactc tctgtaggat
      421 ccacaacatt tcagtagttc agatgccttg gacaatgatg actcagttgg actgatttat
      481 tgccactcca aggccctgct taatactaaa gtgctatctt atgataatac ctcagaaaat
      541 agcactgata aaagaggagg caataattac ctacattttg aagtaatgtc ttcatttcta
      601 acatcctata aagatgtaag gtccatttaa aatgatctgc tccttgtatt agcaagtcag
      661 ttaaatcaga tattatcagt gtcctctggt ttatgaaatg ctatctatgc aaa
//
LOCUS       KCKM01001160             959 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18419apa ultra-conserved element locus
            uce-1841, sequence.
ACCESSION   KCKM01001160
VERSION     KCKM01001160.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 959)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 959)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..959
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18419apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>959
                     /note="ultra-conserved element locus uce-1841"
BASE COUNT          241 a          179 c          211 g          328 t
ORIGIN      
        1 aacataacct ttaaacgtgg aaaatttggg agctgttagg gcacttccgt gttgcagctt
       61 ggactgaatt atctctgggc cattttatcc cctcatatta gtgtgaagcc tgcatgtaaa
      121 aactttcttt tggtttatgc cccagtaagg aggaggagaa ttagatctat ggtactttgc
      181 tctaagtagc tgttattagt tctagattct ggtgttggta ccctcttgta taacagaaac
      241 aggtcttctg aaagtaatga aaatgcagag ggaatactgt gaaactggta gggctgagca
      301 gaggatcagg tctcttagtt cacaactttt cagacctgca aatttatctc ccatgagcgg
      361 aaaggaaaac cttcagaagc ttttggcact ttggcttgtt tgtgtattct tcatgcgcac
      421 atcatgtgca tctgtgtgtc tgtgtgtacg tatatatgat atgtgtaaaa gtacttttta
      481 tatagtaact ttctgcatag ggcaacccaa acagctgtta ttccttttta tagcttcttt
      541 aatctatgtg ccaacaagtc agtttacaaa atctgttttg ttgatgactg ctgcgataat
      601 aattgtggtg ttttgtggct tggcaaaagc ctggggtctc ctccgaggac tcttgccaaa
      661 gcctttgaag gggttgaggt ggattcactg ccaaaatgag tcaccactct ctattttatt
      721 tagtgtcctt ctgccaaggc cttagacact ttctgttttc attcttttgt aggctttcct
      781 tcccacattg tggtttcctt cacagccaga gcaatgtgtt tgccagcata ggtgagagag
      841 tgtggctgac tctccaaatg ccactgctag actctgctta agggttagtg gtttagctat
      901 tgtgctttct taaaatgaac gtgcaagatt taattatatg cctatgaatt ataaataaa
//
LOCUS       KCKM01001161             562 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18433apa ultra-conserved element locus
            uce-3864, sequence.
ACCESSION   KCKM01001161
VERSION     KCKM01001161.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 562)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 562)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18433apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>562
                     /note="ultra-conserved element locus uce-3864"
BASE COUNT          188 a           82 c           85 g          207 t
ORIGIN      
        1 gctttgttat ctaaggaaaa attagtgaca attattttta ggagaaaatt gaatcatttt
       61 ccattcttac cagcatatgt tttactcttg gttgtggctt aatttgaata caactgcaaa
      121 tttaaaagta ctttttactg caggaaaagt aattaaatca gttatgtatt tgtggagctg
      181 ctttaaagta ttaaagtaac ttgatcccca atgaacttaa aattttaatt cattttacct
      241 tacgctggct gtggaagaag tcaaattttt aaatgcaata tgacatatgg ctgttcatta
      301 tttatacatt ctgtagcaga ctataaattt tactttggac atatatcgaa gcagtgaaac
      361 catttcagtt gcaaacacat aaatcatagt tacagttatt agtctaaatg taatgccacc
      421 caggttctag atcaaaacct ttaaaatcca ttataattga cgtctgctgc ataacttatg
      481 tctgatttta ttaaaggagt tcattattat ttatatcttt gaaacgttat atccctagct
      541 gtgtaaccag ttaaatggga aa
//
LOCUS       KCKM01001162             713 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18449apa ultra-conserved element locus
            uce-6231, sequence.
ACCESSION   KCKM01001162
VERSION     KCKM01001162.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 713)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 713)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..713
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18449apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>713
                     /note="ultra-conserved element locus uce-6231"
BASE COUNT          197 a          159 c          168 g          189 t
ORIGIN      
        1 gttcacttaa tcctgctggg aatgctcctc tggaaaacta agccttgcaa gagcattttg
       61 caataaagtt ttagcagggc aggccatgcc aaggaggtgt aaaaccccca gggctgccaa
      121 tgccctgtcc cccagctgcc cacctccctg ctcctcaggt acccgtaatt accttcccct
      181 aattgccggc tcctggtcat tagttatgtg agctgtttac ccaaaaacac gaggcagggt
      241 aggagtactt catcctagga gagggttaat ctctggctgg atgcaggatg ccctcatggg
      301 aatggaatgt gtagtgttgg taagtggttg tgccccagaa gcctttgaga gcccactgac
      361 tactgcatgc taacgattgg tattattaaa gaacaattga tggcctgtaa ccaaacaaca
      421 gaaactaatt actggaaaac ttttattgtc ctttaattac tgggcctctt tgtcaattag
      481 cagaagagag caggagaggg gagaagagag agagagtctg gttttatagc aacaataaat
      541 tttccaaaac tacagtcatc agtagctgaa aaagcgagtc tattaacaca caatattaag
      601 gcatgatatt tactctggct gctaaatgta ggtgcttttc ttccgaaaat gtgcagagct
      661 ctaggaatac taatcagggt tttcttccta cggctctggc actgcctggc acg
//
LOCUS       KCKM01001163             746 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18465apa ultra-conserved element locus
            uce-7614, sequence.
ACCESSION   KCKM01001163
VERSION     KCKM01001163.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 746)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 746)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..746
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18465apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>746
                     /note="ultra-conserved element locus uce-7614"
BASE COUNT          223 a          147 c          119 g          257 t
ORIGIN      
        1 aagacgctgt cccaagaact acttccttca taaaactcac tacagtgtct caggaatgac
       61 agtactgaat gaacaagata aattcctatg ttagatctat gtgtttataa tccatattag
      121 tttggtgttt aacacaatct tcttccaccc acactcacta gaaatcatgc catcaagtgg
      181 aacatatgct ggttccctaa gaagtatctt gtcaaaagca attcggtgtg atccaagggt
      241 agcatcagat gaaatttaca tttgaagatg accacaagga tcagaaagta atttagggac
      301 tgaaaagata tacttacatc tggatattct tttacaggca catatagttt ctcttgtaac
      361 tgtacaatag gtcccacagc atctggtaat tctgcacttc tcttctccgt actaccattt
      421 aatgtgtcgt tatacatgtc tttccgtact ctgctaattt ctgtgggggg aaaaaggtat
      481 attaagtatt aaatacagta acagattata atctatcata acaatcttct ctttctaatc
      541 tttcccaaat cttaccacca ttttcctcat ctcttcatga gcatcacagt cacggtgggg
      601 caaaaagtct agtctggttt tattaagtct ttttgtggag tttttttttt aaattgcagc
      661 actcatctta aatgtttccc ttcatgtctg taaatttgct gtgtactcat cctgtttatg
      721 gagttcaact attgaagtaa aaatta
//
LOCUS       KCKM01001164             599 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18480apa ultra-conserved element locus
            uce-2586, sequence.
ACCESSION   KCKM01001164
VERSION     KCKM01001164.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 599)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 599)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..599
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18480apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>599
                     /note="ultra-conserved element locus uce-2586"
BASE COUNT          170 a           84 c          119 g          226 t
ORIGIN      
        1 gagcaacttc aggtgacgct tatggttcct aaaaatgcaa gtatcaactg gtaagttttt
       61 tgaaaattga atataaaatc atagagaaat gctttatttg attctctgtt tatgggaaat
      121 tcattttatt tgactttttt atttgtaata tcaactatat tgcagagcag agtttctagg
      181 tgctccctta tggtaccatt cttctaaatt attaatgctg tactgttgat atattgtcag
      241 ccttgtacat acattctatg aaaatgagtt ttacagtagg ctgggattta taacaaagct
      301 tgacatatgc agctaattca cctagacagt cttgtcagtt ttaggttcat aaataattga
      361 tactcagggc ttggagttca gctactgtta gtgctccagc tgttaaattt cagcagcata
      421 atggatgaat atttgtttat aatttctgta catggacctg atgtcagatc cccggtctca
      481 tttacatagg tagattgaga tgttggaagt gtaatgagca tatgaagatg atgaattgtt
      541 ttcctcagtg ctggtgcgtt tctgtaaatg tttgattagt tttgaatgga ttactgtta
//
LOCUS       KCKM01001165             670 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18495apa ultra-conserved element locus
            uce-5426, sequence.
ACCESSION   KCKM01001165
VERSION     KCKM01001165.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 670)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 670)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..670
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18495apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>670
                     /note="ultra-conserved element locus uce-5426"
BASE COUNT          178 a          101 c          140 g          251 t
ORIGIN      
        1 ttttactgct aattaacttg gtttgtgtta agtaaaagtt aaatcacact gcaagctgta
       61 ggaagacttg ttctagaaat acccagtgat agagacttga ttaataagtt tgaactgtta
      121 ctgtttaaca atttgtagac ttgtggcttt tttttgcttt ggatttctat gctacactag
      181 ttcgccatgt agcaattgca ctgtgcaata ttacaatatg aggactggga aaatttttta
      241 tggatgtaat gtctcttaca gtttgcgata gtatttcttt ctagttctca gtgatttaaa
      301 tgtgaccaag ccttctgtac tttgtcacaa aaagcgggtt ttccaggtga ctattttggt
      361 gagtgtcaaa ataagaattt atggtgtatt actgtcgaga ttcactttga attaaaatat
      421 atattgcagc agatgacttc tggtggcttt catttgttgc tatgttacat caaggctgga
      481 ttaaggtgaa ggtgatgaaa attcctgggg agggctctaa aattgtgata tagtggtttg
      541 cctaggattc tcttcttcct gaatttttaa attttattaa cttcagggtt ttcttaggag
      601 gagattctgg ctgtagcata gccaaacctc gaaggttctt tgttctggat gccccacttt
      661 tacaacctca
//
LOCUS       KCKM01001166             517 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18511apa ultra-conserved element locus
            uce-7419, sequence.
ACCESSION   KCKM01001166
VERSION     KCKM01001166.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 517)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 517)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18511apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>517
                     /note="ultra-conserved element locus uce-7419"
BASE COUNT          157 a          116 c          116 g          128 t
ORIGIN      
        1 aatagtaatt aattttttcc tcttcacaaa acccgaggac cttcaaatgg aggcctcggg
       61 agcgagggca gcttcctttt gaaagtggcc tttctagaag ccataatcgg ctctccaact
      121 ttacagtaca catgttcccc agtaaatgtg attaaagagg cacacaaaaa accccttgca
      181 gaaaattaat tcagtttcca gaataaaaag tttgataaag ttgtgcaatg ctccaatgac
      241 aacacataat agaagtgcag agttttatcc tcttgaagga taaatgagcg gccagaaagg
      301 tctggtagtt cccagagtaa aaacatctgc tacagctaat tcactttagc ttttgattgt
      361 aaaattcatt agccatatca ggcagctgta gttccaaaca tgttgctagg aagtacagtt
      421 ttacaggctg ggatgccgtt tgttctcccc agcagcggcg aggttgcgca agcgcccggc
      481 gaaacgcaac cacccgccac ccggggaagg agggagg
//
LOCUS       KCKM01001167             986 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18526apa ultra-conserved element locus
            uce-7982, sequence.
ACCESSION   KCKM01001167
VERSION     KCKM01001167.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 986)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 986)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..986
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18526apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>986
                     /note="ultra-conserved element locus uce-7982"
BASE COUNT          318 a          181 c          176 g          311 t
ORIGIN      
        1 atgtaaagtc ttagggcaaa atctgattta atctttatta atttaaatgt ataattactc
       61 attatttctg atagtaaagg cgaaagatga gggtggtttt gccttaaccc tattgccctc
      121 ccattctttg ttcagtctcc gctgaattgc tgtttctctg aatgaaattt ctctaagaac
      181 acctattagt aaacactaag aatagataag tatatacata tacacacata aacactcctc
      241 ctcctcccac acacatagat gacataaatc gttcgctgca gtttcttaga aaccatagtg
      301 tagatgtggt atttaagagt gaatgtggct aacgtttatt agacttgaac tgtattgtgg
      361 gtaattgtcc agtaataacc tctggtaaat tatatgaagc ctttacttta cttaacaggg
      421 aacgcaggct ccccaaactc taatattatc atcattcaag ataatgagca acacaaacca
      481 ttctattacc aatctaaaag caataaatgt caaagtaaag aactatgcaa tattctggcc
      541 tggaagaaca aaggacaaaa gtaatgataa tgccttttta tatttgcagt ccattatatc
      601 atgcataaca aatgaccctg taattgtaga cagtgttatt ttaacaggtt gtaaagcgaa
      661 aatggtgggg gtggcacgag agtgttctga atactgccct gacaaatgct gtagggctgg
      721 taaattgaaa tacctggtgt tttatttggc gagtgtgctg gattattctg aagctgtttt
      781 gtttatcact atgatcacct cgagctctgc aatgtgacac caagatcctt gtttgctgca
      841 ctgatgattt tactaataac taggtgatag cctcagttct cctctaacac aatcacaagc
      901 acaaagatac attttaaaac acatgatact gatttatgga aattcctaat ttgggcactt
      961 atagaccatt cagaggctgc acaaga
//
LOCUS       KCKM01001168             767 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18541apa ultra-conserved element locus
            uce-2875, sequence.
ACCESSION   KCKM01001168
VERSION     KCKM01001168.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 767)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 767)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..767
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18541apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>767
                     /note="ultra-conserved element locus uce-2875"
BASE COUNT          261 a          142 c          119 g          245 t
ORIGIN      
        1 aagctaaaaa tcgtaacgca tttattcttc aactctacca acaaaaagca gagtcccaat
       61 tatgtagaca aactctgact acttcttcac aaaagaacga tagcacactt aggagtttta
      121 ccagactctc ttgtcttaca ccaaactatt agatttgatt ttcctctttc ctatcccgtt
      181 ttaagagatt aacatttctt aatgaaatta ttctgggtct cctctatttg catgaaggaa
      241 atattcaaga ctaaaattgc aagatgacaa aattaatatg cagtttggta aagttctagt
      301 cagtctttga acaacacgtt tatctatcca gtaaagcttg tgttaatgcg aggtaagagt
      361 ctggcaaatt caactctaat ggagcataaa agtgcttttg cttgaaagtg agatcatttt
      421 taaaaattca aagcatgatc actttttccc ttcttttttt gcaggaacaa tctgatacaa
      481 gcagcaaagc ttaaataaac tagaaacatt tcaaatgatc cataaaggat taataagcac
      541 tgcaggaagt cctataggct cagcgtatac atttttcatc tttttctcct gcgacaggca
      601 tgacatgaaa ttctaaacag aactcaagtt tcaaagtcac tgaatgttaa ggtctgcagc
      661 tttgattcta gggtagagtg aggtcaccat cttggaatat tcaatttaaa tagataacaa
      721 aatattgatt ttattagcat aataaagctc ccaaattatg gcccttc
//
LOCUS       KCKM01001169             257 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18557apa ultra-conserved element locus
            uce-6920, sequence.
ACCESSION   KCKM01001169
VERSION     KCKM01001169.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 257)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 257)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18557apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>257
                     /note="ultra-conserved element locus uce-6920"
BASE COUNT           87 a           37 c           45 g           88 t
ORIGIN      
        1 gttttattat taactctagc tttgaattag aattccctat attacagctt ggagctaaac
       61 tctgtttaca aaacagtatt tacacttgac taattttgca gatcaaacta attaaatcaa
      121 ttaaactggt gattaaccaa atgaaggctg attgcaaaaa ttagtgggtt tattttggag
      181 gactggaagt aagctaatta ctgcagtgat tacttgaacc tggagtactc tgaatgtggt
      241 ataaattgaa acctcat
//
LOCUS       KCKM01001170             837 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18572apa ultra-conserved element locus
            uce-3463, sequence.
ACCESSION   KCKM01001170
VERSION     KCKM01001170.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 837)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 837)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..837
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18572apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>837
                     /note="ultra-conserved element locus uce-3463"
BASE COUNT          222 a          160 c          198 g          257 t
ORIGIN      
        1 aacgcggtgg gttggaaggg acctttcaaa gtcacctcgt cccgcgtccg cggtgagcct
       61 gctggtttag atcctgtcct ttcccaggga agctgggtgc ccgtttgtga gacagcgagg
      121 ctctcgtggg gaaagaaatc atcctgcttt cttccttctt gctggagtgg gcccttttca
      181 ttccatactg ccagttcact gtgattgaaa tttgaaagca tgtagctgtt aatctgggag
      241 tgattaaaga gcctcatttc ttggaagagt cagtactcat catctgccgt gctgaatgag
      301 cctctaacat cccctgatcc cattatattg tgattaattg tgccagttta agtcaataat
      361 tcatttgtta aaaataggcc tgcaaagtat catttgtctc aggggagata tcagaataaa
      421 aaaaaaatca tttgatactt ctcattaaat tagtgttggg agttctattg aagggttctg
      481 ttcatgaaac atttattgca ggcttatttg ataagaagtt gtatttgtct aaaattatgt
      541 ctgctaacag atgtaacggc ctgcattttt ccgttgttaa tgaaagtata aagagtctaa
      601 ataagtgcgt gactggggag agaagtcagt gatgacaata agggagattt ctgaacacgt
      661 gttctacaaa acaggcagaa ataatgtcct catctttcac ggcaaagtgg ggtcctcttc
      721 tccccactcg ctcctcggcg tgacagtgcg gtaatgggag gttacgtgcc tgcaatgaaa
      781 gatggatgtg ccccaaagtc tcatatgtgt aaatggttat aaatgttgca ttcatat
//
LOCUS       KCKM01001171             343 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18587apa ultra-conserved element locus
            uce-5130, sequence.
ACCESSION   KCKM01001171
VERSION     KCKM01001171.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 343)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 343)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18587apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>343
                     /note="ultra-conserved element locus uce-5130"
BASE COUNT           73 a          108 c           40 g          122 t
ORIGIN      
        1 agcccttcct gcccgcccag gagccgcgcc ggtttcaaga gcccccgacc tttaataatc
       61 atttctgccg ttatctgaac gcttcctaat tcatcccctt ctgtccctga aaatctaaat
      121 cctatttaag ttaatgccct tcattttcat ttataaagac agatacaaaa taattatttc
      181 ctatctctgc tgtttcctta tcttctgtcc taataattcc tcactgtctc cctttcatca
      241 tccgtctgca gtacaagaaa cttttctgtt agttaaaata ttctgtgtgt tcattttcct
      301 cccctttcat atctcgccgc tcccctctcc ctacctgccc tcg
//
LOCUS       KCKM01001172             536 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18603apa ultra-conserved element locus
            uce-7210, sequence.
ACCESSION   KCKM01001172
VERSION     KCKM01001172.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 536)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 536)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18603apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>536
                     /note="ultra-conserved element locus uce-7210"
BASE COUNT          164 a           80 c          103 g          189 t
ORIGIN      
        1 tgggatctct ctatttttgg ctcaagagag aaattctgaa gctgctgctg atttgaaatg
       61 ggagagaagg aaggaaggaa attagaattt ttttaactta caaaattgtc ttgcctgtgt
      121 aataacactg agcatgactg tcactctgaa gacatattag ctcatttagg taattagtgt
      181 gagcagcatg tttccctgct tattccattc aattataggg tgctcacttt gtcattactg
      241 gagtatctta atgtgacttg taattagtgt aattacaatc caatgttaat tatatctgtc
      301 acttagacat aattttatat agtaatggtc ttattctcaa taaccttatt atgttgttta
      361 ttcaaacagg aatttagcct tctttcatgc gtcaaatatg gagattacaa aaagtactgc
      421 ctgtcatttt tgtagttatg actaggggat ctttgcattg caaaatcata tttggggcaa
      481 tcaatgaatg gagaaaacca aattatggag cccgattatt agagacatgc tgaact
//
LOCUS       KCKM01001173             487 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18618apa ultra-conserved element locus
            uce-4947, sequence.
ACCESSION   KCKM01001173
VERSION     KCKM01001173.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 487)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 487)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18618apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>487
                     /note="ultra-conserved element locus uce-4947"
BASE COUNT          141 a           82 c           83 g          181 t
ORIGIN      
        1 acaaaccttg cctccatctc ctttccttct gccattattt catttaattt catctggttt
       61 taatgagtga ttgttttcaa cagtttttaa gagtttcagt cagcaatatt tcattctgaa
      121 ataaaagcta atgatccata aattcttaat gccatatttt tatagtcagt aaattagtct
      181 taaatgggtt cagtaagttc tctgatgtat gtcattaatt gttaatggtg ttttaaccag
      241 ataattgttg taaaaggttg tttatcatca ccattggtgg gcgattgttc cttgcaatct
      301 gttccgcctg gtactgctga acttagtcta tctaccattg tgtgcagcaa agagatcagg
      361 agactgtgaa gcatagttta aatatcaaat tcaagcatgt ccagtgaata atgaagctac
      421 agacttaata aggtcagatt acttttcgtt tttgaaacag aaacacatgt gtatcttatc
      481 ctagtgc
//
LOCUS       KCKM01001174             708 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18633apa ultra-conserved element locus
            uce-5147, sequence.
ACCESSION   KCKM01001174
VERSION     KCKM01001174.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 708)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 708)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..708
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18633apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>708
                     /note="ultra-conserved element locus uce-5147"
BASE COUNT          260 a          146 c          151 g          151 t
ORIGIN      
        1 acacacctgc ataaaacccc tgtgtattta aatacactcc tactgttaaa agaaaataaa
       61 atagactaac gggttaaaaa ccaagtttag gtgccgagct gttacaaaga gtagttcact
      121 ttgcatttgg acagtgttaa aacaacgttt ttaatgtaga tgctagtgca gaaaccggag
      181 attaaacaca aagagacgca gacagctacc acatgcagga aaacgaggtt acaggcacgg
      241 cagcaccagg cgctcgccca tcaccgcggg gaggaggaag ggacaggcat agcaaccaca
      301 agcccaaaag cagaaaagcg cataccttca gcttggaatg aaaatcacga gatttccttc
      361 tggcaagaac ctgaatgtga ctagacacct gcagggtagg ggaagggagg aaacaaagga
      421 aaagcctgta accatggaga tgaaaagccc cctacaactg ggcaagccaa acgtacctta
      481 atggcggctt gaatttctcg aactttcttt cttgctaaga cctgtatgtg actagacacc
      541 tacattgttc aggtttatag ggaaaaaaaa aacaacaaac aaaagaaaaa caaaaagcaa
      601 atcaaatttt aaatgtctat ttttctgttt aaaaaaaaaa aattctgagg ggaggaagtt
      661 atttgcacct tcagtaagct ctgctgttaa agataccaca ttcccagc
//
LOCUS       KCKM01001175            1042 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18649apa ultra-conserved element locus
            uce-4098, sequence.
ACCESSION   KCKM01001175
VERSION     KCKM01001175.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1042)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1042)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1042
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18649apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1042
                     /note="ultra-conserved element locus uce-4098"
BASE COUNT          294 a          186 c          169 g          393 t
ORIGIN      
        1 attgcagtgc ttacattgta aatagtggga tgaaatagct gttttattta atttctaaaa
       61 gtctatgaca atttataagt ggttattttt atacattaca catcttgctg ggtatgtgca
      121 atttcccgaa tccacttcgt gtgccaacta aattttaaga tcaacctact gcttcctact
      181 ttctagtaaa gatccttgtc ttatttagaa acagtttatt tagaaaccta aaacataaca
      241 aataactatt aaaaagttat tttcatgtat aacaaccaag aattctgtaa atatgtgtag
      301 gtacttatat catgcacacc caaataactc actgcattcc ctgttatctc aacaactttg
      361 acattaaatg ccatacctat cttcggcttc atttttctct tacgttgttg caccacaaga
      421 agactatagc tggcatgtga gttactttgc ttcttttttt tgttttctct ctctctattc
      481 tcctaggcct agtagatgct gcagtcgatg cagcttccca agcaggtgtg tttgtatgtt
      541 gcatggccga tctgtaattg ggtggaagac ttacacatac tgacatcgtt aatcaggatt
      601 attgggcttt tggcttactg atattacttg caattcttac tggcctgcag ctttgatgtt
      661 gtatttcata ctcagtttta catttcacta acataatttc tcataatttc taaacataat
      721 aagcaaattc atgaataacc atcatcttat tcacgtatga attacagata ctgagatggt
      781 attggaggga tatttttgag gccttttttc cttttctttc caaatactgt tgagtcattc
      841 attctgataa ctaaacactg tatgatattg atctgtaatg gttaccactg gttaaacatg
      901 atgtaagatg atggtgccca aaggatcttt ctgctacagt gaaagtaaat tgtgttgttt
      961 ctgtctaaat attgatcatg ttttaaagtt tctccaaatg taattgcact ttacagtttg
     1021 gattttaccc tgagggatgt gt
//
LOCUS       KCKM01001176            1184 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18665apa ultra-conserved element locus
            uce-4509, sequence.
ACCESSION   KCKM01001176
VERSION     KCKM01001176.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1184)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1184)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1184
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18665apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1184
                     /note="ultra-conserved element locus uce-4509"
BASE COUNT          239 a          236 c          269 g          440 t
ORIGIN      
        1 agcggggtta tagcttgatt cctcttcttt gaacttacat gtttcaggtt ttttctgccc
       61 cttcagaatc tttttgaaaa cctttgacat caattctaat gcatgttttc tctggaattg
      121 gagaaataca cacagaaaat tgaaccaatt tcttggaaga atttcccata gggttttttt
      181 taatgagctg tttgaagtgt tttagagcta tgcgagtcat ctccctgtat ctagagttgt
      241 gcagtaccgt tttataagtg gatacttttg ccaggatttg gctttcctat agattgcaac
      301 ctcttgttgg gtttgtgtgc tggcgagtga tgctgtgaac ttggcctaat gtcgggaggt
      361 actggagagt ctcttcactc tgtatattgt gtacgtactc tttggctcac gctttgagac
      421 ttattcttgt gtgtcatgtt aatgcatttc acccctccaa cctcaagttg ctaacatctt
      481 gtagcggtgt tctgtctctt ctcctttcct ttctctgttc ttcccgtttt tgttttctca
      541 caggctgtgc gaagtttaac tgtgcatctg agagagtgac gttcaagcct ggtggcagga
      601 ggacccgatt tctgagtacg ccctgcttgg ctctttgtgt gtaacacctt tactccttcc
      661 ttgtctgttt tttgttttgt cttttttggt ttgttttctg ctgcttggat ctgtttcatg
      721 cagcccattt gcatctgtca ccttgtattc cctctcatcc catggctcag ctgagctgct
      781 cttagcacac ctttagaagt ttgggttctc acattaggtt cttaaactca tgacagcaag
      841 gacttgtttt ctctaaggtt ttgatgggaa cttccaggac aggtcagtga aataacagaa
      901 actggggaga gtttgcaagt tgtggacgca tgggctgcct tagtaattgt gcttcagtgt
      961 atgttagaag tcttggaggg gaggtagcct ttctagcgga acagcgagga agatccgttt
     1021 tccaaattat tcctttgttg gacattactg ttactgatgg agagattatg ttgacttcct
     1081 ccagcagtat gcttgctgtg catttttgga tgttttttat gttctcagca ctagtgctga
     1141 ttatagtgca gaacattgat gccacctgta ggcagttaat aatg
//
LOCUS       KCKM01001177             776 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18680apa ultra-conserved element locus
            uce-5704, sequence.
ACCESSION   KCKM01001177
VERSION     KCKM01001177.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 776)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 776)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..776
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18680apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>776
                     /note="ultra-conserved element locus uce-5704"
BASE COUNT          221 a          133 c          142 g          280 t
ORIGIN      
        1 cactactcta aaagaaacgg agggaaacct gtgattatgt agttactgta atgctggctg
       61 cttgcttaac gtctgtgtgg tttgccttat ttacatatca cagccttgcc tttataaagt
      121 tactttaaat aatttattag attgatcttt tcaaaatcct gttcaggcta ggtgtcatta
      181 ggaaaagtta tttaaactta tttaagggtt tgtgtctgag tagggcattt acctgcctca
      241 ctgctgatat tctaaaaata cttctatgtc catactatta tccattcttc acgtccaatt
      301 gctctgttat ggtaatagtc agaagcacac catgtagtaa ttacttacag ctgacttaag
      361 aaaagaatat tcaactcccc cactgttcca ctagaaggtc tttatgcact attaactcat
      421 tcctgtttat taatactcta ctggtaattc tagctgctgc tttttaggtt tgtaatagga
      481 ggactattaa acagcaatta ttgaccatat gggttagtga atatttgtcg tggttgttgg
      541 gtgattgtct tgttgggttt tttttttatc cttttgagat gtttttaagg agccacatca
      601 caatatagta gtgcaagttt acgtctgcct gggattaaca gctttggcag tgttccccac
      661 ctagaaaatg caaatttcgt atttcagaaa tatcagctga agctgtgaaa atacagaaaa
      721 attaaaaaac cgtgaaaacg ctgtgccaga caaagggaaa atcttttttt tttttt
//
LOCUS       KCKM01001178             828 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18694apa ultra-conserved element locus
            uce-5289, sequence.
ACCESSION   KCKM01001178
VERSION     KCKM01001178.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 828)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 828)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..828
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18694apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>828
                     /note="ultra-conserved element locus uce-5289"
BASE COUNT          276 a          157 c          173 g          222 t
ORIGIN      
        1 cctacaggtg taaattttct catgaaagct gaccaaatcc actcctatgg tttgacactt
       61 cagcagcttc accaatacat atgaaactgc aattcaatat caaggacaac attttcaatg
      121 tattttaaca tggtctgatg tatctgtgct aatgctcatt acaacagatg ttacttcata
      181 agatgacaaa actgacaaat gtttgtttcc ctggcgtctt gttgaatcac aagtgaagat
      241 atcaaccaga caaaaccagc atctaggatt acgtaccttg ctatgtgcat atactactga
      301 acctaacaat ttccaagtgc ctcctcttcg gtccatgcgc accatacgaa ggatctgtag
      361 gaaacgaaga cttctcagtg ctgatgttgc aaaaatatta ccctgagttt ttgcagaaac
      421 aactgctatt gaagcgatga gaacaatgat gtctgaaaga aatacattac agaaaacatt
      481 aatgtccagg tactaataga caacacatac atgtacataa gctgaatgct ggaacaaaag
      541 agagacttct gcagtggctg ggaatctgaa gcactgagat tgctgtttga ggcagggatg
      601 tgaggtcagg agcagtgtca aaaaacacct tgggagcctc cagggtgaaa actgagggtg
      661 gtaattttgg aaagatatgg ataagaggag cagtgttgaa ggaacctcat gcaggggctt
      721 tgaagcctga tgtagcaaac tgtacaaata agtagaagga ctagattttt tccctttata
      781 tcttttcccc ttgaaacttt cctatggaaa ggtaagtaag aaaacaaa
//
LOCUS       KCKM01001179             817 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18709apa ultra-conserved element locus
            uce-3430, sequence.
ACCESSION   KCKM01001179
VERSION     KCKM01001179.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 817)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 817)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..817
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18709apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>817
                     /note="ultra-conserved element locus uce-3430"
BASE COUNT          245 a          169 c          126 g          277 t
ORIGIN      
        1 ttacattatt ctagtgcaaa attaatggga tttcctcatt ttagtttatt atcttcatct
       61 atttctctcc cctaaagaag ggagaacagt cccactcatg ctcccgcctt cttctcgccc
      121 ccagagaaag tagcaattgt actattaagc ctagagtgct ttacatatgc aaacacaaac
      181 acaggcttac agggaagatc ttccctatcc atatgttcat ctccttccct ttacctaaat
      241 cagacgatta cctcaacagc tcagctgtgt tattgagaca tttcagcgtg aaatttgttt
      301 ttcctcactg aactttaagc agaatttcaa gtgccaagtc tccaaagcca agtggggcta
      361 ttaagagata attactaatt atgctaattt gagaagttgt gctatttctt tccctggtca
      421 ttttatctgc agctctcctg agaaaacagt ccccattcaa tgttaataac ctttccaggc
      481 taagcattca atggaggaca gtctgtccta aacccaggaa tattttacag ttaatctaga
      541 tatgtggctg taaattagaa agagaagcaa gttgcactga tgttaatgac ttgttattaa
      601 ttttttgcag tagcagaaat atctgattcc tctctattca tatattgata cagctttttg
      661 ccgatggttt tattttaaat aagtgtcctc agtgacttga aatattcagt agaccaataa
      721 catcagtgat cattttctaa tcgtacctac tgcaagctct cataatacta gattaaaaca
      781 aaacagattt gatttgcact tttaaatatc tcattta
//
LOCUS       KCKM01001180             876 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18725apa ultra-conserved element locus
            uce-5955, sequence.
ACCESSION   KCKM01001180
VERSION     KCKM01001180.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 876)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 876)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..876
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18725apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>876
                     /note="ultra-conserved element locus uce-5955"
BASE COUNT          285 a          162 c          120 g          309 t
ORIGIN      
        1 gaagaaccaa taaactgatc cacaaaacat tgtttctgct tgacacaggt ttgtttgtcc
       61 tcctttaata attatacagg ttttgtagat tttatattaa aaaatagact taccagtttt
      121 aatttgatat attaattgtt gaagcttcga atacacagta gcataaagaa cctaccaaaa
      181 agtagctgaa atttggaagt atcgacttct tagcattcca cccaaacaaa atgtcggtgt
      241 tgataaaatc cactttctaa aacacgtatc cttgcaaatc ttcagtactg tcatctcatc
      301 tccctgttgg agtttgattg attacgcctt ttccttatgt tcattaatct catcacctta
      361 tcttttacac cacttcattt tagcagaaag gcaataataa aaccctcatc cattatcctt
      421 ttacgcatct agtcaagcgg aaatggttaa taacatgcta caaattgaac ttcaatcacc
      481 tcattttctc ctttgtcgaa tgcacattaa agtatattcc aaaagtgcaa tttgttttac
      541 aggggaattt gtgttatatt gctacagaca actaaaatta agtgtttctc agtttggtta
      601 ttaaatatat ccaactgtcc ttttatctct gatactaaaa cattaactca ttttattagg
      661 gtgtaataat acaagagcct tatctcccag aacacaggga catctagtct gcctaatact
      721 aagtgttata caatgggtca tttatctttt ttttaaaaaa aaaatatgct tctgatagtt
      781 tatgaattgg tatattatag cagatgaaat ggctctccat ttaagaaaag ttaatttgtt
      841 tacatgcagg cttatcttca aatgcaagcc ccatta
//
LOCUS       KCKM01001181             642 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18740apa ultra-conserved element locus
            uce-7415, sequence.
ACCESSION   KCKM01001181
VERSION     KCKM01001181.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 642)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 642)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18740apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>642
                     /note="ultra-conserved element locus uce-7415"
BASE COUNT          216 a          111 c          128 g          187 t
ORIGIN      
        1 aaattgacac cctttgcttt cacgatgata cattcctaac acgtttcctt gaggagctgg
       61 aaatggtgca aaaatctggt aagataagtc tctataaagc cttagaagtc aagcattcca
      121 ctttagacat ttaagacaaa tgcatggcaa aaacaagttg tttttttaag gttcctactt
      181 aaagttctgt gccaaagcta cagtacttat acattttcta aatgtgtttt aagcaataag
      241 ttgtacaaca tttttagaac atgtgttaag ctatttctct aagaatgaag ctcttaacaa
      301 aacataagca ctctgcatga gatcttagca gcaaagtgct taaaagataa agtaagaatt
      361 ggtaccatgg gaagaacacc agctgtagag cacacaggtc cattatgaga agtatggtag
      421 tgggtaggga gaaaatgatt taatcaggag taaaaccaat tttattataa gggcacgcag
      481 ggggtgtggc accatagtga gagggacatt tcaaaatatc tgacagattt caacaatgtg
      541 aaaacccacc ctgttcttta aagtgacagt aaaccccatc aggtctctct ttttgatgct
      601 attgttaaca gttgactgtt taaagctggc ctgctaagat gc
//
LOCUS       KCKM01001182            1010 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18755apa ultra-conserved element locus
            uce-6138, sequence.
ACCESSION   KCKM01001182
VERSION     KCKM01001182.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1010)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1010)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1010
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18755apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1010
                     /note="ultra-conserved element locus uce-6138"
BASE COUNT          259 a          237 c          228 g          286 t
ORIGIN      
        1 cagggaatgg ttagtggtag gcaagatgaa ggggaagtgt cccaagtttg ggctgctttt
       61 tctgcataca tgttatgcac caatttctca ttttcctcct cctcctcttc ctcactcctt
      121 ttttctttcc tggggcaacc atcctgctag ccacttcttc tgtgaagaag gcattccatc
      181 tcttgttgga tgcgtcccac tctggcaaga cacctgaatt cataaaatga cctgccccag
      241 gatgcagagg gcttcatttc gaatcataag aaaggttatc tttcttctac aatggggtca
      301 atctgggcgg cgggggggaa acccaaataa aacccacccg tgcgaagacc gctcctgcct
      361 gtgaaaagcg tgcttgcatc cactggaaag aaaaggctgg tgagccctgc cgcgggctgt
      421 ttgtatgatt gtttctttcc acagctgtgt ttttttgaac tgctcttcct gtgttctgtt
      481 atagaatagt cttacaggaa ccaatcatta gcgctaaaat acctcaggta ggagtgccag
      541 tgtgacctgc caaccgatca gattgtggat tgcagtggaa aaaactgaat tatactaacc
      601 attccggcac cacattagag atgggaacag aggctttttt agggcagcgc agactcacgt
      661 gtgatccaag cccccgctgt agcagggtgg cgcgagtcca gatttcacac cgagtggcat
      721 ttcattcaaa aaaaaaataa tgtaaattca atggaagggt taaccaggtc atgcttgtcc
      781 cattaccatg tagaagcacc tactgcaatg gacaccgttt tcctgtcacc tcttttaatt
      841 cattcatgct cattcctggt gcacatatgc cacccttcta atacggaaat actggaaatg
      901 gttctagccc tttctgcttc ttaatttctg ttatagggca gtttgagggt ggagaagacg
      961 catttgagat agacaaataa aagatcctaa aattggactt gctgcctaaa
//
LOCUS       KCKM01001183             909 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18771apa ultra-conserved element locus
            uce-1014, sequence.
ACCESSION   KCKM01001183
VERSION     KCKM01001183.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 909)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 909)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..909
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18771apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>909
                     /note="ultra-conserved element locus uce-1014"
BASE COUNT          295 a          162 c          167 g          285 t
ORIGIN      
        1 tttgctacag ttgacagcac atagcagtaa attcagatct tgcccaatat tcatttttaa
       61 atgctgaaag aatatacagt tcaactcatg gaaataccat tcaacttttt taattgagtt
      121 catcagtcac tggcctttta tatttttatt tacttatttg gttgtttcag aaaaattctt
      181 tgttgcatca acaacactaa aattcttctt cagattaaga tcaacattca aggctaaatt
      241 taaacctcag gaaaggtaaa agaatcttta atttatgaaa ctgaacaagt agacttatct
      301 aaacatctct agggctttaa tgggggatat ctataattct ctgaattgta ttcctttcac
      361 agtgatattt tgtaattcca ttctattacc cttgcttaac attaatgaga taaaaagatc
      421 acattacggc gattgatgtt cttcaaatta aatgcacgtt tccatgtaca aagctgtctg
      481 ctaatttaaa aaacatagca tgtaacatag aatcatgacc atggtcatca ctcagctggg
      541 atcagatagc attttttatc tattcattgg atttaacaag gcatgagatg gaagcagaat
      601 acaaaatgtg ggtagattat cccatatccc ccttttggcc acttcttggc aatctctgca
      661 aggaaactga ggcttcatgt tgccatggaa ataaacctca aggtcaaagg ggcatatgga
      721 aggtcaagca atgacaaagg aacatctgag aggccatctg gatgagtgac ctgacataat
      781 tagtcattaa tcccactctt gggaacaata gagttagccg agaatgtgtt tggactttga
      841 tcgtggtcag ggtgatctca tggggaaaag ggaagaaagc tccacttggt agctaagcag
      901 attaccctg
//
LOCUS       KCKM01001184             759 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18787apa ultra-conserved element locus
            uce-4118, sequence.
ACCESSION   KCKM01001184
VERSION     KCKM01001184.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 759)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 759)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..759
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18787apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>759
                     /note="ultra-conserved element locus uce-4118"
BASE COUNT          211 a          152 c          165 g          231 t
ORIGIN      
        1 caaaaccaac gaaagggtca aataagacag caggaaacat atactttacc atctcctgga
       61 atgatgcgca gggtaacggt gtttcccgct tccttaatga ggttgacgat gtctgaatgc
      121 gacttgttgg tgatggagca cccgttcacg gccaagatcc gatcgcctac tttcagcttg
      181 ccacagcggt ctgcggggct cccttcaatt atccgaccta ttttgtgagg catggccaca
      241 catgcatttc ccgctttggt attggttttg ggggttttga ttttggtttt ggtttggttt
      301 ttaattgttt acaatacgtg ggaatatggc gaaggggaaa aggagaaaaa gggttgaaaa
      361 gggaaagaga aggttaaggg ttaattaatt aatgcatcaa gcaaaagtta ttataggata
      421 gctttgctgc cagtgttcaa aacattggcg atcaactagt atgagtgcac agtactttac
      481 tcctttataa aaatggtgtt ttgttaatca ctgaaaactc cccccaactt ggtttctgtt
      541 catgaactgt gagattttta tagactacaa ctgcatttag cagcccattg gaacccaaat
      601 cctggattta ttttcaaaga gaaaattcga aattgtctgt aaaaaagaca accttcctcc
      661 tccaagatta caccgaggtc tcagcttctc cagtccttct ctaagtcaac tgctgttcaa
      721 gcttctgcca atgttttgtt ctttctcaat tcagaaaga
//
LOCUS       KCKM01001185            1057 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18802apa ultra-conserved element locus
            uce-7016, sequence.
ACCESSION   KCKM01001185
VERSION     KCKM01001185.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1057)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1057)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1057
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18802apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1057
                     /note="ultra-conserved element locus uce-7016"
BASE COUNT          342 a          195 c          163 g          357 t
ORIGIN      
        1 catcttacct gcagggtcta tgttgctctt gctggacaca attttcagca tcatcttctc
       61 actaaataat aaaaagaaaa atcataattt taacatacta gcaataaaaa ctagggaatt
      121 ttataatcat caaattaaat ggccttgtct agcatacata tttttaattt aaatcaccag
      181 tagcttgtca gttttgtttt ttcttagacc agcttttaat acaagttaag caaggaatgg
      241 agtataagca gtagaaaaca cagagatgta gctacactaa ttctttctta acacgaagaa
      301 gagtaacaca gttaatctcc atctatcatc ggcatattct tcctctctgc ctagcattct
      361 catgaggatg ataaaaatat ttttaaatga ctgagcattc aggagttttt tactattaca
      421 ttcagacact atttttgttg attgattact gaaatcatta cagagaaaca gatttaatga
      481 attctttttt tacctagaag catctttgct attacttgta tttggccctt taaaaagcgc
      541 agactgaaca agaccagtta aactggcaat ctgtttctcc atggcttgta tcctctctct
      601 gtaagacaag agaaccgttt gttaaagcca gatatatttg ctttcgaact tgtatttcta
      661 ggtgaatgat taccacaggt ttggaaagac actacagagt ttgtgcaaag gcccatgggt
      721 atccgtttgc atataccttg ttgcagcagc ttaccgcatc ttggtttgga cagcttttgc
      781 atgataacag acaataaaaa agacatctgt ttggttaaaa aagagcaaaa caaacaagta
      841 cccagataat aaacttctaa cgatctcatg aggcagccat ctaaaacaat cagttaatgc
      901 ctcttggaac taatgaaaat atttttttca gcattacata tattttttct tttacctaca
      961 ccaggctaat agttttgcct gtatataagg tttcaggatt aaagacttaa catttcttgt
     1021 tactattttt actttcccca aactcaggat ttttgcc
//
LOCUS       KCKM01001186             476 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18817apa ultra-conserved element locus
            uce-6762, sequence.
ACCESSION   KCKM01001186
VERSION     KCKM01001186.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 476)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 476)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18817apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>476
                     /note="ultra-conserved element locus uce-6762"
BASE COUNT          126 a           93 c          101 g          156 t
ORIGIN      
        1 tgaaacagta tataatgctt gctacagtga agaggatcca ttctctgata cctcttagga
       61 aaaagagatt tttttattat gtgtctttaa agttagtagt tgatatggac acctgaggag
      121 ttcatgggtt tcagtgacct tttactgtgg acctgtttcc agtcaattca tgttttcctc
      181 atagccagac agctgtttat tatcgtgtct tctcgcattc tctacaatat tttctactga
      241 gacctcgagc agcttgttag tgggaagtaa atattgattt ggcatcctgt caatgcagaa
      301 agaatgaaaa aatttccacc agaggcccct caaacatttt cctatcgaca ttttctgggc
      361 agagaggaaa gctgcataga ggatgacaag gctgagacta gcagaaatcc ctgaggggtc
      421 cattgagact gccgctgtga cctgtgtgat acttcttctt ctctttcaag tctttt
//
LOCUS       KCKM01001187            1006 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18833apa ultra-conserved element locus
            uce-175, sequence.
ACCESSION   KCKM01001187
VERSION     KCKM01001187.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1006)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1006)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1006
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18833apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1006
                     /note="ultra-conserved element locus uce-175"
BASE COUNT          329 a          192 c          188 g          297 t
ORIGIN      
        1 gtaatgaagt gttaacaaaa accatatgaa gttattacta cagccacagg ccgcagaatg
       61 cgaaggaagg aggatctcaa gagacctacc tattttcagt catcccctga ttcatagttc
      121 atcaaaaggt gttcaccaaa acagtaggca agaaacagaa attgattcat taggcataat
      181 gaacaatgct gatcatatca tctctaaaat acggtcagcc gacattgata tatacatact
      241 ttaactcatt cttcccaact ttattaggta catatgtcta cagcagacac aaatgaaaca
      301 ttctacagct aggctccaag ccaaaaacta atttattctt taatgtggta gtgattactt
      361 ggtggttcct tgagcagaga tgacaggtct gagctaatgg agttgtactg taagttaata
      421 taaatcatga cagagcaatt aattacagaa accactgcaa atccctttgt tagttttccc
      481 catcaccaga aggatttaat aatgttcatt ttgctaagtt ccagtgacat ttacaagtct
      541 taaaccattt ttaatcaaat caatatctct ggctgctaaa tttagttgtg ctttgctaga
      601 aagtcctgga atgcatcgat actaatgttt cctaccttct gttcaagtaa attgcactga
      661 agccccacac ttcctcttca tttgtttaca ttgagtaatt gggatttttt taatgagcaa
      721 cataagaaat aagtgcatcc aaaggagtta ggagacagtg agctagacag atatacaaat
      781 atcagtgctt atgatgcaca tcatgtagtt gaaaaattta aggaaatttc ctttaattgg
      841 ctgaaagcac tccaaacgaa agaattgtgg cttgcttggg agctgggatg ctcagacaga
      901 gctctgggta agcctgtgcg accagtacaa gatacaaggc agagagacct ctttttgtcc
      961 ctgggtgttc ttggatctga tacctaagca tccaaaacac ttgaat
//
LOCUS       KCKM01001188            1007 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18849apa ultra-conserved element locus
            uce-7453, sequence.
ACCESSION   KCKM01001188
VERSION     KCKM01001188.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1007)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1007)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1007
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18849apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1007
                     /note="ultra-conserved element locus uce-7453"
BASE COUNT          342 a          176 c          188 g          301 t
ORIGIN      
        1 cagaaaatac cttccccaca ttctgcagta aaaaaaaaga atccattaat ataagatctt
       61 tgtcctagct tacacattca acttgagtct aaattattta gagactctag tgccttcatc
      121 taataacaca ggaaaaaaaa caggtatatg tctatattca aactatcatt taatttatag
      181 atggagcaag actaaatctc aacatcaggc ttgaaggaac attccataga acacacacac
      241 aatgggtaca tgcagcggag ttgtacgtac agggatgtgt gtgtaagttt tggtgccaag
      301 cacacaattt aatttaatgg agctgaagaa aaaatcataa acaaaaataa acctttaaca
      361 cagaaaacta tttatgagca gagaatgagg aaaaaggtca gggaaaagga gccaaagaaa
      421 gtgagacaaa atgggcatga tgacttgtct atacttgaac atctgacctg ttagctggtc
      481 gtcgcctgca gcaggggcga tgcgaatgta tggtgttgta agctgagtca cgattatcgc
      541 agctaaggca aaggaagatt tccaggtcag catgcatgag ggagaaaaaa gccagactga
      601 agctacgcca gcaagaagaa tctcggtcaa tagtttattg tctgaacttc ttacaaataa
      661 aacccaaaaa actcccacaa tttcctttcc atcttcagtt gttagtttgg ttattctgca
      721 aattaataag ctttcatgcg tgacttttat tcaggaaaag gactcagagc acattattta
      781 catataatgc ttttgaggaa actggagact ttggctctgc tagtcacagc actgtgtttt
      841 ctaagtgaaa gttaactgct tattcagatt aatctagtat taacttgtcc aggtaatttg
      901 aactaatttc actctttgcc tatttcataa cagtgcactt tttgttttta agataatttt
      961 aatgtatttt tgagctagct aagattcatt tttcttttat ctacttg
//
LOCUS       KCKM01001189             264 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18864apa ultra-conserved element locus
            uce-1050, sequence.
ACCESSION   KCKM01001189
VERSION     KCKM01001189.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 264)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 264)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18864apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>264
                     /note="ultra-conserved element locus uce-1050"
BASE COUNT           86 a           40 c           52 g           86 t
ORIGIN      
        1 taaattatta tttcaatatt tattggaatc tcagaataag aaagaagaca gattacacaa
       61 atccatctca gttgattaat gggtactcca gcaaaaggca taccctgatg gagtgggtca
      121 gtatgcagac tatattactg aatatttcag cttggttgta aatatagtat ctgtttctct
      181 tagggactgt cacactgagt gcagtataaa aggcaataaa tttcaacaga ttaattaact
      241 ctttggttac tggggctgtg tgtc
//
LOCUS       KCKM01001190             732 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18879apa ultra-conserved element locus
            uce-366, sequence.
ACCESSION   KCKM01001190
VERSION     KCKM01001190.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 732)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 732)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18879apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>732
                     /note="ultra-conserved element locus uce-366"
BASE COUNT          221 a          125 c          125 g          261 t
ORIGIN      
        1 ttatttcctt ttagtctctg gtaaaaataa taaaaatcct caaattcttt taatttctcc
       61 caggaaactt tgtgaaagga catatttttc ttcatttact tatttgagaa atcttatcaa
      121 gtcaaattct ttcatctctc ctgctgtcat ttattaaatt ctccttttaa tggtccatgt
      181 gtatgtgcaa gtttgacttc aagtgcgtaa tcctgaaata ttaatatgca acttttttca
      241 taaacaatac aaagaagttg acaggtctga aaggggcttg tgtgaaaaga taattaagtg
      301 ctttagagag tgtcaagagt caatagctca gtactgtcag cattctcgag tgttacaggc
      361 tataattaga tggcatggag gtgtaaggga tgtttggcag tttatttcag catgatctcc
      421 agggtaaaaa taaaaagctg cctcaaaatg agacactata agtgaggaga gaaggaaaat
      481 taaagcctca tacctaattt ttagcatctt acacaaattg ctactttctg aagatgccat
      541 tgttttcaaa gtttccatcc acctatccag tcagttttat cttacaccct aaattctggt
      601 tatgaggtca ctggtacttt tatttattct aattttccaa ttctttcgaa attggactca
      661 ctcctgtatc attatggcac ttagtgagtg gcctttaatc agtagcatca tttacaacaa
      721 ggtatgtgtt gt
//
LOCUS       KCKM01001191             957 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18895apa ultra-conserved element locus
            uce-1540, sequence.
ACCESSION   KCKM01001191
VERSION     KCKM01001191.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 957)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 957)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..957
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18895apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>957
                     /note="ultra-conserved element locus uce-1540"
BASE COUNT          318 a          198 c          163 g          278 t
ORIGIN      
        1 agtctcaggg ctccgagtct catggagtaa cttttttcct actgagctga atcttggggt
       61 ttgggtattg atccttgata tgttcaagaa aaagcaaaaa aacactcctg gagcaagtga
      121 aaatagatca aacaatctat aaaatgttca aaaataagcc ttcgtgtgtg accacacgga
      181 gtttgctacc tgtaaataca gagagcatct gtctgtcttc cacaaacaat acagggatgt
      241 agacgttacc gagatacagt tgcatttcac ctggcagttt gatgcggcgc acttgcacat
      301 gacaacacat tgattttact tctacctcca tgcagacatc tacgtaaaga aatccattag
      361 gcagacagtt ctcatctcta ttgactgaca gagtgacaat cgaatacttt tcaccttcca
      421 aactgactga cagctagaca cttaaacaag ccttcaagtt gcaataatag tatgaaacac
      481 tttcaattac ctgaatcaaa caaatccatg atcccactag ttgaatgtat ttttctgtca
      541 gctgctatgc ctggcttggt ttacattgtt gtttgggcaa ttcagatccc taacaaggat
      601 gctgcaaaca aacagcagcc caaggtttct aaacaatgag ttatacctaa agcagtccta
      661 ctatacgcga aaaataaata aacgcagcca gccttttgaa tcactttctt cctagcctag
      721 aaaggaagta aaatctttta cacttacaaa aatgcacgat aaatagctac atcattagat
      781 aagtgtcttt ctaatactag cacatgttaa atgtcagcct ccctttaaaa ggtgaacatg
      841 taggtttttt aagtaaaatg aaatcgtaac aaacggtatt ttaactttag gtccaaatat
      901 agaaacagtt cggccagttt tctaattcaa attttaacga atgaaattct ctctgat
//
LOCUS       KCKM01001192             274 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18910apa ultra-conserved element locus
            uce-3213, sequence.
ACCESSION   KCKM01001192
VERSION     KCKM01001192.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 274)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 274)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18910apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>274
                     /note="ultra-conserved element locus uce-3213"
BASE COUNT           64 a           65 c           58 g           87 t
ORIGIN      
        1 ggctcggagc tgcctatctg ctctccattt ccactcctcc gctagataag aatggaaata
       61 ctgacttcat agctcactga ttaaagtgtc tggatttctt gataatacac agataaatta
      121 tgtttttcaa aaagaaggta gggaagggag tgcgagggga ggggaaaaac ctccagtcca
      181 tttttattat tatttttttc tttccttcct cttcctggcc gtgccctgcg agttgaggtt
      241 ttgctgctct gaaacatccc gcctttccca gccc
//
LOCUS       KCKM01001193            1100 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18925apa ultra-conserved element locus
            uce-5521, sequence.
ACCESSION   KCKM01001193
VERSION     KCKM01001193.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1100)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1100)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1100
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18925apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1100
                     /note="ultra-conserved element locus uce-5521"
BASE COUNT          339 a          230 c          250 g          281 t
ORIGIN      
        1 ttattttcac tcactgaact aaagatattc agcacaatgg aaacatgtcc ttggaaagtc
       61 acattatggg ataaatcctg aggctgggaa ctgaagcagt gatgcagccc tttcctcccc
      121 tctcttgggt ccaggaaagg tggagaaaac tgggggaatt agagcttggt tttccatagg
      181 atgccccaca cagcagggtc tgctggggaa taacaaatgc aaagaccagg aggaggccaa
      241 gagagggaag gacagcatcc acagtaccac ggttcccagc tcagctacaa acatgtctgg
      301 gaaactgcac ctcaggctcc tgaacagtga tttgctctgt caaaaaaagc aacgaccaaa
      361 ccaaaaatat ggcaatgttc agctggagtg acctttgcaa gaaatctcgg gaaaaagaaa
      421 agagcaggat ctttccttcc tagggaggac tgtgaatcgt ctcccaactg cactcctgag
      481 cgtgaatcaa ttttcttcca gtcgataact agcgcaaagg ttctaacctt catttgtgct
      541 ccaaatactc aatcggggat gtagaacaca taccaattaa gcaattcagc taaaataaga
      601 aggccgtgaa ccaacatcgt tgctgcagct gcccctgagg gatcgggggt tagcagcttg
      661 gggaaaaggt aatttattga gcttaatact ctgcgaaatg ttctcatgat aataagattg
      721 taagatcgtt ttaatatctg aagtcatgtt gaaaaggtca tttctcatct tttacgccta
      781 cctaagtcat gtaaattaga gctactcaaa cagagttgag gatgtttgca gcctaagttt
      841 ttctgtattt ctggaggaca gagaaaaatg tcagtaatcc caagtggtgg acacaaccag
      901 atagggtccg ggagtttcag aacagcaact ttaagggacg cagttacttt tgctacgcat
      961 taagccagca tttcatcttt gacctagcag actgtattca gacttttttc ctccatttta
     1021 acgctgtgat ttgaagaacg ttaaaaaaat attccaaaca cactgcatgt aatctgaaag
     1081 gggtcgggaa tacagctgat
//
LOCUS       KCKM01001194             983 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18941apa ultra-conserved element locus
            uce-2293, sequence.
ACCESSION   KCKM01001194
VERSION     KCKM01001194.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 983)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 983)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..983
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18941apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>983
                     /note="ultra-conserved element locus uce-2293"
BASE COUNT          321 a          186 c          201 g          275 t
ORIGIN      
        1 cattttaata actgacagga cgtcaattgc ttactagata gagtaaaatg acccatcccc
       61 aaatattggt taactttaga atcacgggaa agtcagtagg gctagtttcc tactcctggg
      121 cacagcaaag gagacaagct gtacacaata atgactctgg ggtcagtata gggatggtgt
      181 ccaaaaactg agagtacatg aatgacagca caggaagagg atactgtttg caaggctaac
      241 ttttattctc taaattagca cagtaaaagc tacagaaagg aaagagaata cagtatttta
      301 ggaaattatt tatgaaatgt agatgggcct tcagttggga atagggctgg gcaaaatgtt
      361 agtggttctt tgttcttgca gctggcctgt cgaattacac agagccagca cagtaaataa
      421 tactactatt gtctgcttgt gtcagagaca gacagaaggt acatttggac ttggtccaaa
      481 caccacaagg gccacttata gccacagtgt ccaattactg cttgcttgac tataaaatgc
      541 actttttttg ctgagctaat ttaagaatgg cagcttttaa tgggatttgt attaaaaggg
      601 gactgctgct caggctttta cctgcaaaga aagttataca ctgtactgga agcaacatat
      661 acacagtcaa aataatcaga gtatgatagc attagcacag taagaccaac agtagtagca
      721 aagtcagtcc tttgcaagtg aaaaaaagga tcaatccttc ctggaacagt cctgtgcaaa
      781 acattcaaga aaaccaacta gactctctct ctaatgatga aacgaatgca tccactcgat
      841 ctctgcagat gtgcatatgt tacataactt ctttcagtct ttcagagaat cactggccac
      901 ttttctcagt ctttacacag atatttttct tcaaatttca gttgcatgca tttgatttgg
      961 agaggagtaa actctactac tca
//
LOCUS       KCKM01001195             969 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18956apa ultra-conserved element locus
            uce-88, sequence.
ACCESSION   KCKM01001195
VERSION     KCKM01001195.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 969)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 969)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..969
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18956apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>969
                     /note="ultra-conserved element locus uce-88"
BASE COUNT          283 a          214 c          198 g          274 t
ORIGIN      
        1 gtgtctcagg caactactca catcttaatt gaaaatgtga aaataacaac agcattccct
       61 ttgacaaaca aatgacaagg tatcaccgtg ctcattggag gtgtccaaac agaaaagcca
      121 gaggggcaac agctggtgtt ggctgtaaca cagtgtgcgt gcacacacgc acgccccaga
      181 cctggactgc gtttccttcc acctgggctc ctccagggat gctgctcctg actccaggat
      241 cgtgcttgcc acttgcctgg ttttggttcc cccttctccg cagccacctc ggttttgttt
      301 ctgcatgtga gctgcaggtc ggtgccaggc aggcagctcg gctgttcccc tcacagccac
      361 tgacactttg aaaggtagtt taggtcgatc aggccgcttc ggagctgcgt gaaggagaag
      421 tttgacagca ccccagccaa aggccacaga gatgcgaagt gttgacggag cagcaaatga
      481 agtcttttct gagccaactg ttccacctgg accccactac aaattattgt tttcaattac
      541 cacctgtgta ctccttccca tgcaacttat tgatgtaaaa ttacaacaac actggtataa
      601 ataagttatg ctgcagttgt aaaatggaag aaattttgtt gtagcaatta tgttcagcaa
      661 gatgacaaaa taaatttcca gtgctgtgct tgcagtaacc tggggaattt aaacctcata
      721 atttccattc atttcagata atttggagta atttctatat gtaataactt tgtaatgaaa
      781 aacacagcgg tactgaagtg atttcaactc tttttttttt cctatggtat acatggcaca
      841 aaataaataa taaaaataat atttcctttt tgtatgtgtt cggtaattct ttcagcaaaa
      901 tcataaacta ataccaggac taaatctctg tccatgaaat gaaaaataaa ttgagttaaa
      961 gaaagtgaa
//
LOCUS       KCKM01001196             541 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18972apa ultra-conserved element locus
            uce-6620, sequence.
ACCESSION   KCKM01001196
VERSION     KCKM01001196.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 541)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 541)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..541
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18972apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>541
                     /note="ultra-conserved element locus uce-6620"
BASE COUNT          162 a          130 c           83 g          166 t
ORIGIN      
        1 ctcctcaaaa cacatcctgc ctcttcctgc tggcaagtcc aattttcctg gatttagtca
       61 agtttctgtc atccgctcaa tgttttataa acatcttaac atatttgtaa tattcactta
      121 tcacctcgtg tgtaagtgtg aacgctcctt agccttaaag agtaattcct caacgcagct
      181 caaacatcta caaaccgccg cgccttccat ttttaatcca catccttccc tttgccacgt
      241 gtcttacctt ggcttctact tctatagttt aacgggaaga cctctcaggc tatttggaaa
      301 attgaaataa ataaaaataa agacaatttt acaggtccta cttcagctaa acctttcagg
      361 gacttcaacg agaagataat ctttctgtga ttatggccaa accctctcgt tgcttagcaa
      421 cacataatta aggaatatgt tttcagatcc gctttgcaag ctggccatta tcagatgaaa
      481 ttactggagc aacaaatgtc atcctcatgc aaatgagctg gtcgtaggca aaaaaaataa
      541 a
//
LOCUS       KCKM01001197             209 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 18988apa ultra-conserved element locus
            uce-3968, sequence.
ACCESSION   KCKM01001197
VERSION     KCKM01001197.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 209)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 209)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18988apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>209
                     /note="ultra-conserved element locus uce-3968"
BASE COUNT           80 a           29 c           39 g           61 t
ORIGIN      
        1 tgaaaagtgt gttcctaata aaggataaca tttcatggtc attatgtgat acacttaact
       61 ttaaaaggaa caaaaatgct gagaaagtca ttttctgaaa agggctctcg gatttcatta
      121 ctatgggtca agtgcctggg gagaagaatt aaagaaaaac acgaacttgt gcacaaatta
      181 attaaagata tttccactaa taaattgtc
//
LOCUS       KCKM01001198            1133 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19004apa ultra-conserved element locus
            uce-7168, sequence.
ACCESSION   KCKM01001198
VERSION     KCKM01001198.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1133)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1133)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1133
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19004apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1133
                     /note="ultra-conserved element locus uce-7168"
BASE COUNT          286 a          277 c          289 g          281 t
ORIGIN      
        1 ttacaagaca agtagacaca gcctgttcat cacataaaga tgctcggttt ctgttggttt
       61 ctttttggca aagacacaca gagaaggtct ctccctctgg cccacgtata tctgtttctg
      121 gtaagggttg gacctctgag ccagggtaca tcccaccaaa cccacacagc ttgaccaacc
      181 tgacagcctg agactttcca gtgggcaact tgcagttcga cagccaaagt ctgctgaaac
      241 tccttccggc tggtggggcg ggagggaaaa gcagtggtat agccttgtcc accatgcgct
      301 tcttcactcc ctccctttca gccctgtcct ttctcaatac ccaggaaaga ttaactcctc
      361 tccgtgcgcc agagaaagtt attatcatta atgaagaatt aaaagggagc gattaataaa
      421 gggcccttat ctggcagtga ggaggaggct ggacaatggg aggaagatgg agaaaatgaa
      481 aaacaataaa tacgaagcgt aaaaggaggc gaggactgct cccacttgtt agatcgcagc
      541 tgcatctcct gaggggggaa ggctccaaat tgctaattac tgcctctgaa aagacctcgc
      601 tctgatatgt tttctgctga aaggttccca ttaatgaagc agcgatgatg ccgtttccct
      661 ttgacttgcc ttcaattccc tccctgagct tcctcccaag ccgggaacaa tgaggccctg
      721 ggagctggcg gctcccacag gcctctcgga gactaggccg ggggcagccg agtgagggga
      781 gccgagccgg ctgtgaaata tggagggggg agataaggca aagacagagg aaagaggctc
      841 actcccagga gcccagggaa aatttgcagt tattatgaag gagatgagac agattaaaag
      901 cccttgtgtt ctgcgctgcc cttttattta gtggcttcat ctcagagatg aaagaagttg
      961 gaaatgactt tctccgcgtt ttgctgcaag aagcttcacg gcacattttt tgactttatt
     1021 cctccctttg tctcttgtcc cctttctgtc tctctctttt tccttttaac ccctggaagg
     1081 tttcgctaag aagcgccatg ggaccaggca gagcatttgc tggagtagag caa
//
LOCUS       KCKM01001199             950 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19020apa ultra-conserved element locus
            uce-919, sequence.
ACCESSION   KCKM01001199
VERSION     KCKM01001199.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 950)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 950)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..950
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19020apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>950
                     /note="ultra-conserved element locus uce-919"
BASE COUNT          261 a          205 c          196 g          288 t
ORIGIN      
        1 tctgctacta atattttgtg tgtgtttttt tctacatgtt gagtcgttat aaaacaacat
       61 tctatattct ccagcacctg tagacaagtg cacagcagct gaattttttg tcaggctggg
      121 attcgtgttt atatggcagg actttttcat gacatacgag tttttaaata aaaaaaaaat
      181 gggtgaggca gcaaatcact tgggttcaga caacagaagg ggaaatccca cctaaacaat
      241 agatatttaa gtagaaagtg ttccagctcc ttctgacaaa gagcctccag aggattacaa
      301 tgcagtcaat gttgctttaa ttaaatttaa tgctgtgtga aatgcactct gagaaacttt
      361 gatgaatgac tggggcaatt catgtggctc actaaagggc atccagccct tgcaggggtg
      421 tcaagccacg atgaattggt tagtacaggc atgtttatag actgcctaag gaaccttgta
      481 tctgtgtggt aatgtcagag ataatgttat gattctctgg accttgaggg gctttggtga
      541 catggttaat gagatagccc agggagtgtc ccagtaggtt acttgcagac ctcccacatc
      601 aaacggagca gctttgcccc ttcagagcct gctgtcctct agatctctca gctggccctc
      661 agtttccata gggccacttt tttttctgcc tcctccccct tcttttttag ttcttagtca
      721 acattaactt tggctgctga aattcaaaag ttgttagttt tcaatttggt ttctctttga
      781 cctggctaca caatggcttt caaagaattt tataggaaca gcaacccacc acggttaccc
      841 tcctcccaaa gcctcaaaat gacaacaaca aagcttaagc cagggaggaa aaatgagggg
      901 gaataaaatt taactctccc tcttgctgtt ccctctctcc tcatcacaaa
//
LOCUS       KCKM01001200             798 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19035apa ultra-conserved element locus
            uce-4954, sequence.
ACCESSION   KCKM01001200
VERSION     KCKM01001200.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 798)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 798)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..798
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19035apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>798
                     /note="ultra-conserved element locus uce-4954"
BASE COUNT          239 a          163 c          163 g          233 t
ORIGIN      
        1 ttagggagtc tgagatgttc ttttttaatc ttatcttcca ggattttttt tccacatgaa
       61 aacttcccca taaattcgca aaacattctg gcgcttggta tggttttaca ccctgagaat
      121 ttattattca tgaaataggt cttttgaagt acaatttcta agtactgatg ttttatcttt
      181 aaacagcgaa catgagcaca ggcttaaaga cccaccgaca atcactcagg aatagctcaa
      241 ctgctcatgt ctaggcgagg tcttccccat acagggaacc ttctgtaaat attagttact
      301 agaatcgcaa cagtaataca tgtagttaat aattatcgca atgtgccaaa actgcacagt
      361 ttgctccctg attacaatat taaattgcta ttgagctgtg atatttgctt caggcaatac
      421 tactgagaag cctccaaaga ctttggttgg cctccctgca caagcatggg aaatgtattc
      481 ctgcacagaa agcagaggca gcgctggggt ttgccagaaa acaaacaaaa ctcagacaat
      541 agaaggaaag ttttatcaga gctgaagtgt cctttcgctt gggagctgtc atctcgtgaa
      601 aagaaaacac acaggcacac ttgattagag cttctgtggc agaccattac catgagccag
      661 gtgattcaag ctgttcatga agagtacggc gcagccagct cagaaagctt tgttttagtt
      721 gcttttgatg gcatctaaaa aggagctaaa ccactttaga aaacctgaca tgtttgtgtg
      781 cctctgtcaa tgggtatt
//
LOCUS       KCKM01001201             776 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19051apa ultra-conserved element locus
            uce-3568, sequence.
ACCESSION   KCKM01001201
VERSION     KCKM01001201.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 776)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 776)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..776
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19051apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>776
                     /note="ultra-conserved element locus uce-3568"
BASE COUNT          175 a          216 c          137 g          248 t
ORIGIN      
        1 cttggagccg tgacaccgat ttttttttcc gtgggtggct cacagacggt aattaagagc
       61 ccttctctcc cgcctgcccc agctcccgtc tccagcagct gctgtttaag tgaaggaaac
      121 cccctttcgt cctctctctc ctttataatt tttttcccct cccttctgaa cataaaggga
      181 tgacagtgct ccaagccagg gtcttttgca tttctgagtt ggttctgtta attggaagga
      241 gggttaagaa tctgcaaggt cgtttcaatc tacatctgac cttcagagta atcctctacg
      301 ccaacaccag agcatgtcat taaaatgagg ccctctgcca tatcccggca tccctttatt
      361 ctctccttgt gcacattaat tgctcataag ttgatttgat ctccctattc tgcaagaagt
      421 aaattgccct cttatttcgc cattttcatc ctgttttctt aattaggccc ttaaaaatct
      481 ctagggcctc agccgggccg caggcctcat cctgggaata aattttgatc tcagcctgat
      541 aaagagtgag caaacccgga gattgaacaa tgtcattctc ccccgccctc cctccgcgct
      601 attctcttga catgaaaagg ctatcagttt ttctctgtgt taatatagga aataattcac
      661 acttcaggcg ttgttctcta tttagtgttc acactcccca gataaatcaa atcagggata
      721 gtgtctgaaa ctacttactc tttctcctcc cagcctcctc acactctttc cttctt
//
LOCUS       KCKM01001202            1023 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19066apa ultra-conserved element locus
            uce-6047, sequence.
ACCESSION   KCKM01001202
VERSION     KCKM01001202.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1023)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1023)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1023
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19066apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1023
                     /note="ultra-conserved element locus uce-6047"
BASE COUNT          327 a          188 c          175 g          333 t
ORIGIN      
        1 aaaaaagcca aaaaaaaccc aagagcattc actttcttaa tcacagttct gtcagtgact
       61 gtgcagtgtg gatcttaata gaaatgaatg aaaagctgcc catcactgga aacaaaacaa
      121 aatgtatgta tgcatagaca cttctgttta gtataaatat ttacctacag ttaaagacta
      181 tttacattaa catatattta tagaactgtg gataggagta aaaaacaaat atatgctgta
      241 gtactatttt aattttgttt tattatttct tttaagtgtt gctcagccat taaaagcccc
      301 tatttgcata tattatgtca ggattcacaa agagtcctct gttttccatc gtgtccttgc
      361 agcagtctga tttctcttag tgttctgccg tcactggtat gtgcaggaga gatcagagcc
      421 ctaataatag atttttgaca gggagctcgc ctgctacctg ccctacacaa atcctcactg
      481 ttcatgtttg cttcatggca acaaagcaga cagaaggaaa atgccaagtg ctgagtttga
      541 ggtacagccc tgccatagct tgacatttca gcagaatagc agtttatgag atgcataatt
      601 tttcatctgg gactcagctg ccattttcat agaagcttgc agctcatcga ctgactggaa
      661 gtagggcaaa ggtttacagc atagatcaag gtctacatcc tttccatagc tatttaaaaa
      721 taagtattat tctccagata aggtcagaga actcagcata tttttttcac ttttttagcc
      781 attttctttt ccacaaagaa aatacttcta gcagaggtgc catttgtagt tgattaaaaa
      841 tgatcataat tgatttaatt taccaaaaga ttaaacaggt cctgaacaaa gtttacacac
      901 agcatttgag caaagctctg ttttctcctc ctcttacttt gaaaaaagct cattccaagc
      961 ttgaaataaa tgaaaagtct ttactcttga agagtaattg gtttgtgttt tattattaat
     1021 ata
//
LOCUS       KCKM01001203             657 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19080apa ultra-conserved element locus
            uce-5402, sequence.
ACCESSION   KCKM01001203
VERSION     KCKM01001203.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 657)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 657)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..657
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19080apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>657
                     /note="ultra-conserved element locus uce-5402"
BASE COUNT          224 a          122 c          106 g          205 t
ORIGIN      
        1 ttgttcatga catgtcacga acaaattacc aaaatgtgtt gtctcctcag gtgtcagctt
       61 ttctctcttg cagtgactga tggttcccag tgttattaca gaaacagatt gatcttttta
      121 atgagctagt ttaatagact ccaaaatctc accgtggctg ctcatccgtg tcagaccata
      181 tgcaccaaga aaacattcag taaaacacaa agctctgctg tcagattgct ctataaaacc
      241 tcacgtacag tagacttgga tatgcagata aataaccaga attggaaaat gcatatgcaa
      301 aaaacgttct caaattataa gcagaaaaaa ttactgtatg tggattttct ttagcaacaa
      361 atcacgaggt gaatgtggtt acgtgcaaga cacattccac ttcctttact aatctgttcc
      421 catattttat gtctactggt atcaatggta tgcagttacc tgtgcccaaa aagaaaaaat
      481 gtaaacatga aagaatgtgt gtatgtattt ctaacacatg tgtgtggcta tcgtatatac
      541 acatatatct ctatataaaa tatatatata aaatacacat ttcgtatgac ttctatatac
      601 atatcatatc ctattggaag taaaagagat accacaactt actttagtga gatgcat
//
LOCUS       KCKM01001204             508 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19096apa ultra-conserved element locus
            uce-4278, sequence.
ACCESSION   KCKM01001204
VERSION     KCKM01001204.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 508)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 508)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19096apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>508
                     /note="ultra-conserved element locus uce-4278"
BASE COUNT          134 a          117 c          132 g          125 t
ORIGIN      
        1 gggatccttt cgaaatcaat attaagccac taaaactgat taggttaagc ctgggggtgc
       61 cctcggagag gagacgtgga ttggggccat tgctcctctc ccaagacaat ttgtccccaa
      121 caagaggcaa caccaccacg accgcgtgcc accgcctggg cgagggtccg ggggaggaaa
      181 ggagagcaga gcctggagaa gaagacagcg agatggctat aatttatact ctcctgccta
      241 tactttatgg ctttcttaat tcggctcctg ctactattaa tgtagttaat gttgagatta
      301 tatctatttt ctggcgtcag gcggtgattt attcaagcca tttttccggt gccggctccc
      361 acgctgttaa atcaagcgac ttgccaatta agtgctgact ggggaagtgg atgcaatctt
      421 aacagatatc taaccgcaaa ttaaaccggg cgtttcttgg cgcgcgaggc caaaccgctg
      481 aaccttgctg agttgggaaa aaagaaaa
//
LOCUS       KCKM01001205             693 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19111apa ultra-conserved element locus
            uce-5700, sequence.
ACCESSION   KCKM01001205
VERSION     KCKM01001205.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 693)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 693)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19111apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>693
                     /note="ultra-conserved element locus uce-5700"
BASE COUNT          232 a          136 c          143 g          182 t
ORIGIN      
        1 gagagcaggt gagtttgtac tgctgatagc aaaaaagcaa cccaataaca accgtaaagc
       61 ccttcttgtg agcttatgta aattgacgaa tgccctcact gtcagcaggt atattatttc
      121 aaagaagaca gacaactgtg ttaatctccc ttctgcttaa tccctatttc tccacaaatc
      181 atcatgttga cagtttaaac agatttagat gtgactgaaa tcaagaaaag gagatagtct
      241 caggatgctg gggctgatgc aggcctccaa gaggtaattt tgtttgtggt agagagagag
      301 cacaggagag agagtaaatc taacaaatct aacaaagcaa ccctctggcc cagccctgag
      361 gatcaaatcc aattctacga agatacacat taagccctgt ctatcacagc tttgcccttg
      421 aaaagacaaa taatgatgag attcacctcg ttgtgcttgt ctctggagag gagacagaag
      481 acatttaagg aacctgcact attgcacatt ttgaatacct tttgttattt aatccttatt
      541 atcttagagc aaggggaaaa aaaaaaagtt aactctgtta gtttaaccac ctggtgtccc
      601 ttaagtaaga agcaataatc actagagtaa taaaagcagt cggtaatcga gaaagtagcg
      661 gtcagcagaa cagtggctca tgcattatgc atc
//
LOCUS       KCKM01001206             995 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19126apa ultra-conserved element locus
            uce-7553, sequence.
ACCESSION   KCKM01001206
VERSION     KCKM01001206.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 995)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 995)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..995
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19126apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>995
                     /note="ultra-conserved element locus uce-7553"
BASE COUNT          287 a          197 c          220 g          291 t
ORIGIN      
        1 gaatttactg tatttcaggg cttcctactt gaatatttgt gcattggttt tatttccagt
       61 ctttaaaaaa aataccgcgt cgaagtgatt taaatcattc tcatgtggca cagcgaaaat
      121 gcaaaggcac attaccagaa agaaatggtc agcaataaga gctgttttgc gaagttggct
      181 tgcaacaact accacactat gtggagaaaa cagttagccc gtaataataa gactaatgaa
      241 ttcagaaatc cattgattga actggctctg ggtagattat gtgcaggctc gcttcaagga
      301 gaggaattta tgaaatgttt gctgcatcca gcaagcaccg ctgctataat acagctgcct
      361 cctccgtggt ttgctttgat cctgtggaat gaaaggacag gaggatcagc tcaggtctaa
      421 atgagattac agctggttcg gcagcttatc tggtctaatg ccaactagtg tggctttgca
      481 cgtcctaagg ggtttacaac agaaactgtt tattgagtat catcggttta ctcaacacaa
      541 gcaggctaat ccttcccagc ctcagcatgt tgtaggattg tgcgtgagcc aaaccaaaag
      601 ctggtgtagc cagagcctcc agagcccttt gtctcgcttc gtattgattt tttttttcac
      661 ctgtgttaaa gacggtaaaa aataaaacca ataaccagcc ctattgtgag caaaaggtta
      721 atctgaccta aaaatcttac aaaagcatct tttaaccctg gaagggatgg tagcctttcg
      781 tgggacttct cactcggggg attttctagt ttaaggtttt gaagagctaa atagggaaaa
      841 cagcttaaat gtttaactcc gcatgtcatg caaggtctct gaattctttc agcagctgcg
      901 tagaaaactt taaacagttt tttctgacac tgttaacagt ggctcatctt atctgtggta
      961 ggtgatgctg tgtagcaagg acatgacacg ctcaa
//
LOCUS       KCKM01001207             734 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19140apa ultra-conserved element locus
            uce-3964, sequence.
ACCESSION   KCKM01001207
VERSION     KCKM01001207.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 734)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 734)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..734
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19140apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>734
                     /note="ultra-conserved element locus uce-3964"
BASE COUNT          222 a          162 c          152 g          198 t
ORIGIN      
        1 taaaggaaac ttcaaaaagt tgaaactaag aaacttatca aaaaagtgga aatttttctc
       61 tcttgttaag tcctagtgag gcgtacatct ccagctacca gggctaaaaa gattaattag
      121 catcattcag ggatgtggaa tgcccagatt ccactggtca tagccagaac ggaaaggtac
      181 attattttaa aagcagcctg gaccatgaag cgactcacac atgcagagaa acaaagattg
      241 gtgcctacct caaaatcatt tgctttattg tagtgcatgt tcagggccct gtacagctca
      301 cagtctctgg ttatagacag ctcctcagtg ctcgtgaccc cgtcgttgat ggcttgccgc
      361 gcatacttct ccatctgaat gtagtaaaac tcacggaaat tgctaaacca cttgatgagc
      421 tgagaggtaa tgcatctgtt gaactgttaa atttaaacag taagaaggat aagagcactg
      481 acattcctcc ctcccagccc catttgcctt gaaaagcatt cttcctcccc cttccccacc
      541 accttttaaa cccatgttac ttatatttct gctgcggagg ggtgggggaa ggagctggca
      601 aattatgtga gtgtatcaga tgagaggaaa atgtgtatgg cccaaaaatc ccaggacaaa
      661 taacagaagg gtaatgatac tgtatccaac ctttttccaa actgttaaag tagcctagat
      721 ttttttaccg ttgc
//
LOCUS       KCKM01001208             344 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19156apa ultra-conserved element locus
            uce-3681, sequence.
ACCESSION   KCKM01001208
VERSION     KCKM01001208.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 344)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 344)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19156apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>344
                     /note="ultra-conserved element locus uce-3681"
BASE COUNT          110 a           73 c           62 g           99 t
ORIGIN      
        1 cttccctgtt ttatggctgg gcctctaatg gttatctcgc agccctgcct ctggcaatca
       61 tgtaaggaat aaatagaagc tgacacagta atttacttaa atcttctcca cacttttgca
      121 gcattttcct ccagaggata cccccgaaac aacaattatt tgaaatgtca cgcgttcctg
      181 cccctaggct accgacaaat gaacattaaa tctattaaca acaaaaaaaa ttaaatgttt
      241 acttttctgc gaaggtaaag aagaagctgg agagagggag ggatgtctcc aataaatttc
      301 ttctcaataa taaagaggtg tagttaatgt tctctctaag caga
//
LOCUS       KCKM01001209             746 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19170apa ultra-conserved element locus
            uce-6017, sequence.
ACCESSION   KCKM01001209
VERSION     KCKM01001209.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 746)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 746)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..746
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19170apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>746
                     /note="ultra-conserved element locus uce-6017"
BASE COUNT          229 a          153 c          140 g          224 t
ORIGIN      
        1 tttaacgaga cctctttcct tcgattgttt acctaaaaat ttacagaaaa aaacccaggt
       61 gtgtcatagt tggcactatg atgcaaaagg aagacaggag ggtgcagaag tgataccaaa
      121 aaggcaaagg tcagtggaat ataacaatgc tatggtacat gaagtgagct atctggttgc
      181 acatatcaga agcagtgaaa cacaaaagaa agtgggggaa attatattac agtgtacaaa
      241 gtaataataa ctgtgcctgc atgtcttaat accctcttgt cccagcagtc ctgactttct
      301 aggcagccca cttctccaca ttaacagtag tcatttggag agcagcaaac gtgccattag
      361 aagcactttt acaagtgtat attcatccac caattagctt aatgtggccg ctttctgcat
      421 attttctatc caggcttgca caaatcttat taatatttcc ccctagcgct ttgacagatt
      481 accttgtcat tatgcatcct ggagcctttt aaacaatacg ggtaaactac tgtttgcgag
      541 gttaatgaca attatcccct aattactgca taagtcactc agtccacttt atctcatagg
      601 cagggttctg ctctgtgtat ctgccattgt gtcactgtaa atgaatcttg tacagctatg
      661 tttatctgtc gttgccttgt aaattacact gacagaagaa tgaacaaatt actgtgtgtc
      721 atcacttaaa tacagcttct gataaa
//
LOCUS       KCKM01001210             938 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19185apa ultra-conserved element locus
            uce-1322, sequence.
ACCESSION   KCKM01001210
VERSION     KCKM01001210.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 938)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 938)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..938
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19185apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>938
                     /note="ultra-conserved element locus uce-1322"
BASE COUNT          243 a          207 c          173 g          315 t
ORIGIN      
        1 tgttaccacc accggtctat aacaagtaaa cacccatggc gtacttacct cccgacagct
       61 cttacagctt ctccacgtgg tttttgttga ggggtgatac caccacattt gcttttgctc
      121 taggagagta gcatggccaa ctttgcagaa gtaacccaag gctttcattt ggcctcttgt
      181 tgccacttgt gcttcgccat cagcttccca acccatctgt cctcaactag cctgcatgtc
      241 tctcgcttag taccctcccg gaaagcatcc tgcccagtca gatgacatat ttgaaggaca
      301 gatgaaaaga acgagccagc acagacaaac ctcaatcaga aaaagttgtg tgtctttcat
      361 gaggatgctg ttttgcatgt tgctgtattt tttaattatt gtaatgaggt gtgattgtct
      421 attggttacc cacaatactt cttggggact ctcccccggt aactcttgtc aacacttgtt
      481 aatctgacaa aaggctacaa attaagctct gttaatttaa tgttttctca ccgagatcta
      541 aataccgaaa gaggcccaaa gcgcaactga agtcctttga ttcactgtac tttattttgg
      601 tataaattta cattcattat tgttttcctt tggatgtgta gccctcaatt agtgtgatgg
      661 ctccattaaa gcaagcgaga cttcgccttt aattattaca acaaaacacc tagtttcagc
      721 ttggggagag ggtctctatt gacataagca gaggttataa aatttaatta gccattccta
      781 tcagatttat ggcattcaaa ttgttctgtg tttctttcct ttgatccttg ctgtacaatc
      841 cccaagattt ttgttctgat caaatgagaa taaagcttac tgtgcagaga gaagtttttt
      901 gttgtttttt tttattatta ttattttcca ctgccagc
//
LOCUS       KCKM01001211            1100 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19201apa ultra-conserved element locus
            uce-1005, sequence.
ACCESSION   KCKM01001211
VERSION     KCKM01001211.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1100)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1100)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1100
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19201apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1100
                     /note="ultra-conserved element locus uce-1005"
BASE COUNT          343 a          234 c          205 g          318 t
ORIGIN      
        1 aaaaacaaat cagaaattca ttttaaaaga agtcttgaaa aaaatcaatg cgagaaggag
       61 cagatgaata ctccagaaat gcaaataacg taaagcaaga attgtcttta tgtgcaggtt
      121 attttaatgt gtttacatga tttctagata gaggacatat cacttaaaaa cagatttagg
      181 caaatgtcat gtgcgataaa tatttattgt tagaattatt tgtggtttca atgaggtctt
      241 cattagcgaa caaagaaaaa aaaatcaagc tattttcatg tttatacagc aaggatgtct
      301 tttgctaaac tgcatttcga gctacatttt tcttccagat caattcaata agtgaaagcc
      361 caacagagaa cagatgcaat ataagagcaa taaagggaag taaaaaaaat taaaaatcct
      421 ttgttctccc tgcagtacat ccgtaaatct attagtgtta ttttcctttc ttctcttttt
      481 tgcatcccaa gccagatctc aagttctctg aagcaatcct taatcaagct ccccaaaggc
      541 ctacgactgc atgcagcaat ttctcccctg ctctcagcac agatgtttcg agcacattcc
      601 attacaccta catgccatta cagctaatgg cttattctga tgaagaaagc tgctttctgc
      661 tcagtgcagc aaaggggaaa atagcctcct gtacagttcg tacactgcaa caatgaaatg
      721 tgggggcagg tggtacaaca gaactctcta atgttaatta catactgtat tacccccaaa
      781 tttggctggt cattaattat gctaatttac cttcctgaaa attagcacca ttcatgtgaa
      841 catttgagca gtttttagca aaatgaacta cggcatagcc gtttgtaaac gtcagccttt
      901 tgaaccaccc caactcagga cggtggcggc tgcaggacgt gcagtgggac ccggctggca
      961 ggcaagggat cccacctcgt cacatgctcc tctgcgacct tggacaggtt gcacctagct
     1021 tgtccatgcc tcagtttctc tctctgaaat attatacttg cttctcacag gccagatctc
     1081 ctcaggtttg aagaggagct
//
LOCUS       KCKM01001212             716 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19217apa ultra-conserved element locus
            uce-5251, sequence.
ACCESSION   KCKM01001212
VERSION     KCKM01001212.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 716)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 716)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19217apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>716
                     /note="ultra-conserved element locus uce-5251"
BASE COUNT          190 a          139 c          222 g          165 t
ORIGIN      
        1 gcagagcgac agatacgttg ctccctgcga tgccaagagc aggagaccct gtctccaagc
       61 agggatttag cagcatgaat gggagaagga tcgctgggga aaatgaaaga gggttgcgtt
      121 aggggtgtga cggggttcat ggtgcagagt actaacatgt gtctttgtct ctggttccct
      181 acgtgctttt gaaggtcttg atttcggaag gactgatgca gtttgctcaa gacccaaagt
      241 tcattgaggt cacaacccag gagctcgcag acgcctgtga catgacgata gaagagatgg
      301 aaaatgcagc agacaacatt ctcaatggta acagcaagca gagccccaat ggcaacctct
      361 tgccttttgt taactgcagg gacccagggc aggacagtgc aggagaggaa gaggaagagg
      421 tgcagaaccc ggattgtaga aaaagtcagg aggagctcaa ggacagcagg atttatatca
      481 gcagcctgta gttgccaggg ctggaagcga tgctggtttt ttatttgttt caatgttcct
      541 aatgggtttg tttcagaagt gcctcactgt tctcgtgacc tggagtaacc ggaacagcgt
      601 tcttcattca tttctgttgg gacgagtcgc agagttgggt ggtgtaagaa agcttttcag
      661 gagcggatat aaccccagca cgtgtccatg aaggaagagt ggaggaggag gaggag
//
LOCUS       KCKM01001213             598 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19233apa ultra-conserved element locus
            uce-2687, sequence.
ACCESSION   KCKM01001213
VERSION     KCKM01001213.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 598)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 598)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19233apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>598
                     /note="ultra-conserved element locus uce-2687"
BASE COUNT          199 a          112 c          140 g          147 t
ORIGIN      
        1 aaaagacaac ctacaacatg ctaagaaaag ctgcataaag cgtctgttgg agaatgagat
       61 gcattgctgc aagaaggtta tgcccgcttc agaagttctg cgccatttgc tgcctgtgca
      121 gacagcatca atggtgatgc acagcagaag ctgcaagtca aaagctctgg ggtgaacatg
      181 tttatagagt tttggtggag ttgtacaaaa gaaaacagct ctggttaggg gcgggggagg
      241 cagctgcaca agcaaaatat aaaggtaaag ggtaggtacc aagagagtca tgtttctcaa
      301 acacagacgc ctgtcagcct tgtcctgtgg agaggggtta aagcttttaa atgaattagt
      361 gtgattagtg caacttaaaa gaaaaaaaaa aaaagaagaa aataaaatga atgtaaatca
      421 aactcaaacc attatatttc tctataatcg gaaagaaacg ttaagattgt tctacctcta
      481 gttccctcag aattcctgac tggccacagg tctctaaatc ctccagagcc tgagaccaga
      541 aattttcctc ctggtcagcc tcggtgttat catgggtacc tgtgaagcta gatttaca
//
LOCUS       KCKM01001214             877 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19248apa ultra-conserved element locus
            uce-6222, sequence.
ACCESSION   KCKM01001214
VERSION     KCKM01001214.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 877)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 877)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..877
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19248apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>877
                     /note="ultra-conserved element locus uce-6222"
BASE COUNT          286 a          176 c          159 g          256 t
ORIGIN      
        1 taaattagca tgaaaacagc agataatctt caagttaaca ataataatag agtcaattct
       61 cttgggagaa caggattacg agtagaaact gctcagaatc cctaaatcaa aaagtcattt
      121 aacaaaacaa acttaatata atcatatcag ccatgcaaac aggaacatca tttttgaact
      181 gcattttaaa tgcaaatgaa attactacag tgctgtggca tttccgtgaa acagtttctt
      241 ggcactagtt ccaggctgaa attatctaat tttgaccggc gtttgtgaca ttacagcaac
      301 aatgtgacga aagcaggatt ggctctgttt gcttctaatt gacatctgca gttgctggga
      361 gacaatggca tgtgctccta atggagagta gctttcaatc agttgagcaa tcagaaaata
      421 atcatagttc tcatacttga acacaaagca cttacttaat gttttccaac ctgctagagt
      481 ctggtttcaa agtgtttgag tgcttcacca ttttgcacaa tgtgatcacc aggaagataa
      541 gattcagctg tcaaaacaga taagaatgaa attaaactac ttcaagtaat aggttgaata
      601 acgatgatgt tacagactaa acaaaagccc tgtagtttat tttcaaatat gtagtgaaac
      661 tgggtaacta caaaggtgac tgcaaatatg gatgagggga aaaaacgttt tgttttgctc
      721 agttttccaa attcaccaca tcatcatgaa acaccgtatt tagctcatga ccaacacttg
      781 tcactgtcag tcctactcct gtgctatctt ccagcatgtt gtgctcaggc cctgttcacc
      841 gtcacccatc acgtctggcc ccgttgctca tctcact
//
LOCUS       KCKM01001215            1192 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19264apa ultra-conserved element locus
            uce-2647, sequence.
ACCESSION   KCKM01001215
VERSION     KCKM01001215.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1192)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1192)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1192
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19264apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1192
                     /note="ultra-conserved element locus uce-2647"
BASE COUNT          324 a          275 c          236 g          357 t
ORIGIN      
        1 atattgcgat actagatatt cccctttatc ccacaatctc aaaacctctt tatgcaacat
       61 ctgtggtcca aggtccaaaa gattaaaaca attttggatc ctttctgggc tgaattcaag
      121 ctctgaacct cttgactttt gtctgtcgtt gatgtttgtg tgctgttgga aatgcagaca
      181 aactggactt ccagtccttc agaaacaacc cagagatgca agaaatgcta ttttcccctg
      241 ctttgcactc ctttaaacaa acccagcagg gtatatcaga tgtagactga gaattaagtt
      301 ataattacaa tcaatatctt tgccatgccc acttcaccaa ataatatata tttcagtcgg
      361 tgcactttgg ggatttatct ctgcaaggtc tgtttctgcc caaatcagtg tgtctttccc
      421 tttgatattc ccacagtgtt cacatatacc ctcaaacaca cacagccctg ggtaatatgt
      481 ctccaatgcg atgaaatcaa tgggaacaca gccttttttg cctgacagta ttgtcagggt
      541 gtattatctg gtttaggctg tggcttcagt tcatagcagt cgtcagttaa atttcccttt
      601 ctgaagctga gcaaagtgtg gtaatgtcac agccacaggc gactgccgct cacaggatgg
      661 tttaccggtg gagcttagcc tcctggcttg tcacagtgta tatatctcag ggtcttcttt
      721 tccttcctac tcagaggttt ccaagaatgt tgcctggagc agtcatggga tgcaaaaaaa
      781 gagagatttt tgttctgcac ttagcaacat taccacactt cacactcagt ttctgataag
      841 gggaaattta actgactgct ctgaactaga tataccagat aatacactct gacagtgctg
      901 cggataaagg ctggcaaacc tactaattta tatttcatta tctctgcact tggcttaatc
      961 tgttatctct gactaaatgt tagaaagctc acaaagagag ctgcactgag cagcagaatg
     1021 tggaaccaca aacacctctt gaacacagag tggcttctgt gctgggggga agatggggca
     1081 ttttggctac ccaaccttcc caaaaattaa tgtgaagcat tgatgcactg cctgctgttc
     1141 taaaccaagg tttgtgtccc catacaacca cctctttgtc aacgcagagt gc
//
LOCUS       KCKM01001216             949 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19279apa ultra-conserved element locus
            uce-971, sequence.
ACCESSION   KCKM01001216
VERSION     KCKM01001216.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 949)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 949)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..949
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19279apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>949
                     /note="ultra-conserved element locus uce-971"
BASE COUNT          264 a          168 c          213 g          304 t
ORIGIN      
        1 gtctaagctc tgttgtgctg tgcccaagca tcagctgtga gcaagaggcc tgaccctgca
       61 caaagagctt cctttaattc ccagtggact tgtggttgaa caatggatgc aggattcagt
      121 ctgcagggaa tggaaactac caggaaattg ttcccatccg tgattctgat ccttccattt
      181 taaaatcaga aatgcaacac aaaaaacaac accgtgtttg cagcagattc tgctgattgc
      241 agggcattgt gtaagcatgt cggggttttc ttttttcttt ttttcccctt cttttaccag
      301 acagaatagg tgaagaggtt gagctgcaga tctcatttct cctgttttgc agcttgtgaa
      361 gtctgccaac agaatccacc ttgacaaagt caaggactct gcgtttaatg ttgaactgag
      421 tgaataaatt atgcatgaaa ttgtgtcgga gtctctagtg tgcagaattg ctccttttga
      481 tatgaaaggt taattcagaa aggagtccaa aatagctgga aattgtgggg ataagtggat
      541 agtattcact gttgtgagct gttattacta gaaattgcat tccctctcta gcttccctag
      601 agatttagct ttgccggtga atataaactg tactcaatag aatagcattt aggagtaaca
      661 agagtgtatg tccacataca gtaaaatatt ctaatggtgt tttaaaagga agctgtactt
      721 tttcatgtgt tctgtgtacc ctaaggatgg attgctatta catttaggtc aagaacaagg
      781 catagggaag gtaataagtt ttgagtacat ctttattaca aatatgctga ctgtatgatc
      841 catatcaaag gaactggaca gtcatttttt tctgattgag tttgtatgtg ccttatgaga
      901 gagtgtctct gagcagaact ccaatcaggt tttctctgag ctttggcag
//
LOCUS       KCKM01001217             340 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19295apa ultra-conserved element locus
            uce-7018, sequence.
ACCESSION   KCKM01001217
VERSION     KCKM01001217.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 340)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 340)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19295apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>340
                     /note="ultra-conserved element locus uce-7018"
BASE COUNT          102 a           78 c           66 g           94 t
ORIGIN      
        1 ttgactggtg cttcttacct cacctctcct tctcggagag ccagggccca attatgtctc
       61 cattaagctt ctgacagatt tacttcgtaa cagtctcagc acttttattg agcatgcaag
      121 actaacaaaa ctttggcaat gcataagtgt aacacagtga caagaagaga caattaaatc
      181 ttctaatact ggcttcacag tgtggaaatt gtgctacatc caccaagaga gggcccagtc
      241 tactcaaata tttaagtact tcaccccagg aacaaactcc tttgcgtttg gattcagatt
      301 actcttgacc tgaggaaggg aaaaacagaa gtctggttga
//
LOCUS       KCKM01001218             760 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19311apa ultra-conserved element locus
            uce-872, sequence.
ACCESSION   KCKM01001218
VERSION     KCKM01001218.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 760)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 760)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..760
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19311apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>760
                     /note="ultra-conserved element locus uce-872"
BASE COUNT          260 a          133 c          148 g          219 t
ORIGIN      
        1 tatcaactct ttattggtta ttgtctgcaa ctcggtaaat ctcttttgga ttattaagtc
       61 catgtctctt caagaaagtg aatcactgac agagttttaa gagcacttgg tgaggtatat
      121 ggtaccttgg caaagcagcc cagagcttta tatcaaaaac cagcatcagc tgcactccac
      181 tcaactggtg ctctctattt agcctgggaa ttgtgggact acacggcctt gccgttaact
      241 caccttccag aatggctggg cagggtacta aaaggtaaat atgagaaata caattggaat
      301 tatgataaac agaaataaaa aggggctaaa atcagaaagg ttttgtgaaa agaaaaacgg
      361 cttgcaataa agctgaaaac agcagtgctc cgaggcaatt tagactgcaa aacacaaacc
      421 attaagtttg tgcattatct tttaatttaa tcttgaatga tttataatcc atcacgcaag
      481 gcttcaacca tatccaatta ttctctgctg cttgattgac aagaaaggtg atttattaag
      541 ctaataaaaa gtgatgtgag ctgagctcat ataaaaaata accagctgga caaagacttt
      601 aaagagacat cgaccttttt tttcccatag agaaggtttt gtcactttta ccaattcagc
      661 agtaatcaag cggcaactta ggtaagagtg cttggatata aaaatgtaaa tgtggataac
      721 aattattaac tcagaagaag gtatttttca cattaacggg
//
LOCUS       KCKM01001219             887 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19327apa ultra-conserved element locus
            uce-5721, sequence.
ACCESSION   KCKM01001219
VERSION     KCKM01001219.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 887)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 887)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..887
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19327apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>887
                     /note="ultra-conserved element locus uce-5721"
BASE COUNT          266 a          165 c          197 g          259 t
ORIGIN      
        1 gtggcaactg tggaattaga aagcctgcca tatctgctga taacatccag cataactgtc
       61 ttactggcag ctgtcaagat cagctctatt cttccctgta ttttactgct ttttcatatt
      121 tgtaggtgtt ccagtgcctt tggcttgcag ttctgtagga cacaaacaaa acttatttgc
      181 aaattgaaaa aaaaaaaaag gcgggccaaa aagaaaggaa gggggctcca aaaggctgta
      241 aaattgtgca gcatgagccc tgtgaagcat gctgttttca atctgctgcg tgccagtcgg
      301 aggctcagag agtgagtgag agaaagagaa ggggtaatgc tgagaaatga tagagtggct
      361 gtgacctcca agctcagcct ggaaatccaa gacattgatt tcacttagca ttcctgctga
      421 gaaatccgac ggagttcagt tgtaataaaa gaacaagatt ctgttctaat ggtaatggcg
      481 tatgacagac atatcacttt gtctgtcctc agcaccagag agaggagaat tggagaaagg
      541 tcacctgacc tgcctgtggt gttgtgcgaa tgctatactg agctttgaac tccagcctgg
      601 aagcacaatt atttataata ctaaatgata aagaaacctt tatagagcct acagtaatta
      661 gaataaagct tatacaatag tgcagtggcc tggctcagaa aacacgctgg cagatccatc
      721 acagtggcag aaattgaagc ttatgtgttg aaattaaaca ccttcatttg tgtctgcatg
      781 gaccttcctt tgctttttga aagcttgttt gtgttcaaca tctctaaaag tttatcatct
      841 gctgattatt attttttaaa tttattttat ttagctcttg tcagcaa
//
LOCUS       KCKM01001220            1000 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19343apa ultra-conserved element locus
            uce-691, sequence.
ACCESSION   KCKM01001220
VERSION     KCKM01001220.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1000)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1000)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1000
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19343apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1000
                     /note="ultra-conserved element locus uce-691"
BASE COUNT          357 a          177 c          162 g          304 t
ORIGIN      
        1 aaactcctgg gttgactcca aaccaccctc acttacctgc atgtctctca catgggtatg
       61 tgatttacca gcaggcagtt caatgaattt caatgtaacc taacagacaa agcaaagtca
      121 ttagacacac caaacatttc acaatatttt taatgtttta tctataatta ataggtgtga
      181 ttaacagtgt tttgtgaaat gatataatgg acaacataga gaaaagacag tggatttttt
      241 ttaagagaga gagagctgct ttttatagta attgggatat aaacacctaa aatcaggatt
      301 ttatactgaa agggcaagct aaccttacta atggtgattg ctcattgtat aatagaaaag
      361 gaaataaaag cttttttata aaatgtatca aatcctaaga gtgctgttaa actcattaaa
      421 gaaaaaatga agttagagaa actggtctta tttttttcca ctcccagtag agttcatttc
      481 tacttcaaca actaagccaa ggtcacattt aactcacttc aatttcaccc agtgcacaag
      541 ctaatgtcaa tagtacagct gccatgcaga gctaaagact gatggttaga caaagccatt
      601 tacacaaggc tgggtctttc atcttctctc agctagtgac ataagaaagc actgaggtta
      661 ttctcaacta gagactaaaa ctggcatatt agaaaaaatg ttattctcct tagctgtcac
      721 acaaaggatc taaagaaatg tagaaatgtt ttttcccttg gtcatctagg gagatcacaa
      781 agtgactcta atagccttca ctctgaaatt ttcacatggt ttaagtgatt gccaagtctg
      841 atattttcca tttacacttc attgccatca gaaaaagaaa aaaatcaata tacctaccta
      901 ctcaagtgtg tcacaggatg agcttataaa agaagacatc agtcttttta gggcatgaaa
      961 aatatactta ttcaaatata tcttatttaa aatgacataa
//
LOCUS       KCKM01001221            1107 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19358apa ultra-conserved element locus
            uce-7768, sequence.
ACCESSION   KCKM01001221
VERSION     KCKM01001221.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1107)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1107)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1107
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19358apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1107
                     /note="ultra-conserved element locus uce-7768"
BASE COUNT          328 a          208 c          202 g          369 t
ORIGIN      
        1 ggttttaaat cctactttct tttgctgatg ctttacatat tacattctgg gaaaattcct
       61 aagtagtgtt gaagcaaaaa tgaaagtgaa agagaaaaca tatcctttgt ggtcttttat
      121 ctaaaaggaa aagtatgggt tttaattcaa ttagcatccc cagccctcta ctggtatttt
      181 tttcaatatt tttactgctt ctgcagtata ttttttaaat catgtaaaga aaagaaagtg
      241 ctagttttat tactagtgtt atgctccatt attttgtata tctgcatttt aacaaacttt
      301 aaaatgaaat aattacaatt ttagctattt aatatattta tttatggttt tggactggcc
      361 tttcaaaagt ctacttaata tcacttgcta gtgagattat gtgtgtgaat gtcgtgtttg
      421 cccctaccat tttccatatg ctctgcctca ccaacactgc catccggcgt agtcctttcg
      481 tagttgtcct ctgggagtgg aagggcaccc agtcttggcc ctgatgaact cttactgctt
      541 ggtgtttctg actcctccag accgctgtca tagcaactct gcaatgaccc ttgatgcggg
      601 tcctgaggct gactcacaac agaaaacgtc actctacgaa atggctgcaa gagaaaagat
      661 tctgaatgtc actggcaagt tcagtctttg aacaactgat tctcaaaaca tgactaaagc
      721 aaactaatat tttaacattt atcaattgaa caatttcatc taaattaaag caaacagaaa
      781 gtacagtcct taaaaggcca cgagacaatg tatctgtgga tttttacagt gagaaactgt
      841 ccagaacctt cccacagttt tgtacagcct ccttttgaag ggctgcacga gctaaggaaa
      901 ctgtcttaca attatttata aattctgtgc agttactctt ttagttcagc cataataatt
      961 tcaatggagt ttgtattaga ctgcataagg atacttgaca gtgtgagcaa atgtatgtgt
     1021 aagactgtgt gggtgggtgt aagtgcacac ctgtaaacta tgttgtgggt attaacaaca
     1081 cagcagcaca cccataagcc tttttaa
//
LOCUS       KCKM01001222             618 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19372apa ultra-conserved element locus
            uce-4010, sequence.
ACCESSION   KCKM01001222
VERSION     KCKM01001222.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 618)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 618)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..618
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19372apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>618
                     /note="ultra-conserved element locus uce-4010"
BASE COUNT          212 a          102 c          124 g          180 t
ORIGIN      
        1 ttttccagag gaagcactaa gacgctaagt tttctgcaca ggttttgcta tgctagttat
       61 gtctaatcat gaaagtgaaa tcaaaaggct tgtacagata tgcatctgta agcaaactgg
      121 gaataggtta gagaacacaa ttccctggtg taaaaagcaa ggtttagcag taatgctttt
      181 aatctggact tgtagaggat tcgggagcat ccatagatct gcttcagtaa ttagcatacc
      241 ccaagtggca ctggaagaga catttgccta aaaacttgat gtcttcatta cactgtttac
      301 attttaatta gaaacatgaa aattagtgat tcatacggac aactatagtt taagtaggtt
      361 tgctcaccat ccaataaatc atagagaggg gaaaaaaagg gaggggagag gcaactccac
      421 aacctgcatc tacaaacaac aaaccctctc aaaccagttg taataaacag tttactggga
      481 atcattcatg gtaataatat gttgatatca gaacctgttt aaagcatggt ttttatttta
      541 tcagggatga aatttccatg taaattagca aaggtaattt taaagataaa ttgcttgcgt
      601 gcagcactac atgtatgt
//
LOCUS       KCKM01001223             755 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19388apa ultra-conserved element locus
            uce-5824, sequence.
ACCESSION   KCKM01001223
VERSION     KCKM01001223.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 755)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 755)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..755
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19388apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>755
                     /note="ultra-conserved element locus uce-5824"
BASE COUNT          252 a          142 c          132 g          229 t
ORIGIN      
        1 agaggtaaac agaaggctga ttttatggag aagacaactg tgtaatcatt cagctaaggg
       61 tcaaattctc cctgaacgta cacagattca cctcctgacg attctttttt ctttaatgaa
      121 agtaaatagt gctggcaatg ctgtacaggt acacatgcaa caaaccggaa agacgttcca
      181 gaagcaattc ctgaggtttc gagaaattac actgaaaagc aaagaatgtg gcctcccttt
      241 gagcacaggc cgcattgcat ttttgttttt caaaacacac ttctaaaagc aggaaggaaa
      301 aaaagaaggg aaaaaagaat tcaaaatatg tagtgctcac ttgggcaggg acttaccttg
      361 ccaaactgtt caaagtattg ctttacgtct tccactactg tattagctga taatccacct
      421 acaaatattt tctttgttct tgtgaccatc tgcaagaaat tacaagacaa gcacacagtt
      481 taaccagatt atttcaaaca ataagtggaa acaagaaata ttcctcagat gccatcccta
      541 acccagttaa tgagaatatt tctttaaaaa agcaattcag attctatttg attagatgct
      601 tctttttctc tgccttgttt tgtttttatt tgagaaatgg ctgagtaaat gcactcaata
      661 acaactctag cccccggata ttttttttta ataaatgatt tttattgtgc ttctcaatgc
      721 aaatatgaat gaaaaaggag tccaagcgtt gtatc
//
LOCUS       KCKM01001224            1021 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19402apa ultra-conserved element locus
            uce-3085, sequence.
ACCESSION   KCKM01001224
VERSION     KCKM01001224.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1021)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1021)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1021
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19402apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1021
                     /note="ultra-conserved element locus uce-3085"
BASE COUNT          346 a          178 c          170 g          327 t
ORIGIN      
        1 tggatgcata tgaaaggaat gattgaagca aactcagttt taagagcaaa ttcaaacaaa
       61 caaataaaca cacaaataaa taaataaaac acacacataa tagtgcaata ggaggacaca
      121 gtagagcatc gtatctttta catttcttct acaattgcat atgatacatc tatcgcgttt
      181 taaaactgca gcttaaaagg ctgccataag aataatttac ccaactttac ataggctgaa
      241 aatctggctc atcccatata ctgagtctgg gttatttaca aacttgagga agaaactatg
      301 aatgggcact tcctcttccc actcagggcc tatagcttct ctgctattgc gagatgtaca
      361 taagtttggt attcaggttc actgtttgac ccattaaact ggtattgagg tataatttgt
      421 gtgttttccc agtacggttg cacatagaat ggggttcatt tccacaagtt tgaataaatt
      481 tatccagttc agtgaacctg ttgttaagct tagcaaaact cagtaggtgg ctttaaagtc
      541 ctgtaattag cccattacat aaaatctgta ctttagattt ttgcacattg cttaataagt
      601 ataacgtgct tcgtatatat aaataacatt acattaaatg atgccatata aaggaattaa
      661 aggccaaagt agttaaataa aatacttgaa ggagatctca aattagcatg tttaattcca
      721 actcattgaa caggaaaagg ctttagcctt actgtaccag ttccatacaa tgtgcagaat
      781 ggcagatatt tagtctccat tttacataag gtcgctgtca tccctgacct ctgtgtgact
      841 ttggaaaagt gttctaatta ggatgtttct tttaaaatct aatcattaca atgtctaaat
      901 atagtcatga attaccaaga cagcacttgc ctcaacaatt tttcatagtt tgtacatagc
      961 taattaattc ttcatcctta atttttgcgt tcaaaatgaa atatgtgagg aaaatgaagt
     1021 c
//
LOCUS       KCKM01001225             771 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19418apa ultra-conserved element locus
            uce-2018, sequence.
ACCESSION   KCKM01001225
VERSION     KCKM01001225.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 771)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 771)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..771
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19418apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>771
                     /note="ultra-conserved element locus uce-2018"
BASE COUNT          222 a          173 c          133 g          243 t
ORIGIN      
        1 tttttcttct ttttgcgggc gctcgcttta agtgacgatt ttctttttta attttaagat
       61 tcctaccatg tggtctttac tttattttta cattttcagc ccattttctt ccccagccca
      121 tctctggaat tgggcagtca gcaagagcca gagagtgctg gcatgtatca ttacattctc
      181 aagatggcat atttactgct attgccagca gggtcgtgct tctgtcctag taaatgtagt
      241 ggagtatgaa aaaggcaatt acatctcact gggtgacctt ttaacagcca tgactacctc
      301 ctatctatac ataattatta taggtgatga tttccaagta ttacaatctc ctacagcctc
      361 ctttaattca catcacattt aggcacgttt gtcaccagtt ttaacccccg aaaactgaaa
      421 aaatagaaga ggaaaagtga tagcaatgga tgtcaagctc tcaagtcatc ctaataaaaa
      481 cacagcaaat aagatgtcgc cctgtttgta ttcattatca gttcttacat gctccgactc
      541 ttgcattaaa cattagacag cctctgatgc ctgcttaaca gtttaattcc ctcctcagta
      601 ttcaggctgt cataataaaa tcagtgaagc acacaaagtc aaataagagc aagaggaggc
      661 attgaacatg tagcacaagg cattgtcatc gcttactatt cactctgcac tacttacagg
      721 agctgaattc agcatatgct gtggagtgac acacaaattc aatctccctc t
//
LOCUS       KCKM01001226             403 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19433apa ultra-conserved element locus
            uce-2699, sequence.
ACCESSION   KCKM01001226
VERSION     KCKM01001226.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 403)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 403)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19433apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>403
                     /note="ultra-conserved element locus uce-2699"
BASE COUNT          122 a           69 c           80 g          132 t
ORIGIN      
        1 aggcaattcc ttagcgtatt gcagtagcaa gcagtacaga tgtaagggaa agctaggtgt
       61 cactcagtaa ggagtcctgt tggtatgatt gacacataaa gcaatttttt tgccattctg
      121 atgtgtgctt tcttgcggag ggatatctca gagacagacc attggagtaa accctttctg
      181 ttgtcatttg gtgagatttt tattttaatg aaagcaatct gtcttgtgtg caaatactag
      241 cctttgctgt ttgatatgca cagaaattca atcagatgct taattacatc ttcacatgag
      301 ttccaaacag ctggctaatt cccttgtttc tgattaaaga gattaaaaaa ataaaattta
      361 acattgcatt tacatacagc tctaaaagga aacacttgcc tgt
//
LOCUS       KCKM01001227             548 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19448apa ultra-conserved element locus
            uce-6766, sequence.
ACCESSION   KCKM01001227
VERSION     KCKM01001227.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 548)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 548)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..548
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19448apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>548
                     /note="ultra-conserved element locus uce-6766"
BASE COUNT          179 a           91 c           81 g          197 t
ORIGIN      
        1 tagggttatt actgagtttt ataacttctg ctataaataa agccttgtca tctaaatatt
       61 caatttaaat acctctcagt ttatttttga acactggaag ttaataataa atatcatctt
      121 tgttttctaa tttttttact gagttgattt aaacgctctt gacagctcca atccaatcct
      181 cccatccaag ctgacaagca tgacatgcat ctctgcatac aagctctcaa ttatgcataa
      241 tccaatgttt tctagggttt taattgaatc actagtctca aacttgttat ttttaattta
      301 caacatttga tttctgacac cggcccctct atgtcataaa ttatgcaggc aagagcctta
      361 gttgtgtggg tgattaaaaa aaactaatta ggcatgatta aaaaaaaata aaacagagac
      421 ctcttaaata tgtgcatgtt accatgtaag agaggcttat ttcactggaa atgcctcagt
      481 gatttttttt ttaagagatt atgttcagtt cagtacaatt tgattgattt tgacagaaat
      541 gaaagaaa
//
LOCUS       KCKM01001228            1077 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19463apa ultra-conserved element locus
            uce-2860, sequence.
ACCESSION   KCKM01001228
VERSION     KCKM01001228.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1077)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1077)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1077
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19463apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1077
                     /note="ultra-conserved element locus uce-2860"
BASE COUNT          322 a          211 c          182 g          362 t
ORIGIN      
        1 tcacagattc ccaacaacaa attctgacaa gtgaaaaatg tttgatttta aaaagtcaca
       61 cagctcgcct tttttaaaca ctttcagtat ttatttaacc tagtaaatag gtttattagc
      121 gaggttccat tctttgtagt ttaggtaatg gatttaccat atgtttatgc tttaaggact
      181 ggtgtaagac tgctaacacc tatttctcca cctcctgtct caggggttaa gaccttggta
      241 tgttgccagt ttactgctgt ggtcccttcc ccttgtataa ttacagtcat tcccagagtg
      301 aaggaaattc cctgagcttt tgctctaact agccacaatg tttcactaca aaaaggtact
      361 tctttaaaag aagaaaagta ataaaacttt cacattatta actttttccc ttttaaaaga
      421 ggctgaaaaa tgccattgta ccacattaaa gatctttaca taagactcac cattggctaa
      481 tgagccttgt tgtacaatct accacatgca actgccttca agtgctgctt ttaacttaac
      541 cttgatgtag tgccaggaat gtgcaaagga tatactttga tggtgggggc agttctctcc
      601 cttccccccc cttttccata ttgatacact tcaaaatatc tgtaagtttt aaactgtact
      661 gttgtttaac attgcaacaa ttttatatcc cacaaaggag gaatgagtaa ttacctgtcc
      721 tgtagaaata ggcaagcaga tcagttattt ataatagaat gataagaagt tgttgatata
      781 ttttacttac acagtggctt tcttgctgag gatacaaagc acttcataag catcctcaca
      841 actcccctgt gaagcaagta ccataatctc tgctgtatca ctcagaaaac tagttcactg
      901 actttcagaa gatgacatag aatatcagta tcaaaaacaa gatctgaaga atttttactt
      961 gcagttccct ctttgattat aagtcatttc ctcccatcat tggagtgagt tgttgtggta
     1021 gtggtgctac tggaatttgt ttaaatttca tattgtagtg agatgtgttc tccatag
//
LOCUS       KCKM01001229             824 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19479apa ultra-conserved element locus
            uce-1718, sequence.
ACCESSION   KCKM01001229
VERSION     KCKM01001229.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 824)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 824)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..824
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19479apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>824
                     /note="ultra-conserved element locus uce-1718"
BASE COUNT          281 a          155 c          162 g          226 t
ORIGIN      
        1 tggggtaggt cgaagcaagg gaaaacctac tgctggccca gcactccagc cgctatctct
       61 gtgtttgtta aatggttgtg cctgttgggg aaccagagta gcagccacca aaatagccaa
      121 tagatcattt aggaaaaaag agcaaaagat ttttttatgt gtgtctgtcc ttgtataatt
      181 ctattctcac tgtgaaatca tccatacaca aaacacaagg acaatttttt tttttcagaa
      241 gaaccacagg gtaggttaca gtcagaaacg gcctctcagt ggtgtgttaa aaaggatggt
      301 cttttcacca aatcatttca cagaggcaaa acagacaaac acaaagagtt gagacttttt
      361 ctcctacatt aaatagagta actgataagg tcagacatat gatacctaaa gacatgaatc
      421 tgtgaactct tgaagtcaaa ggacttctct gtgcaaagga acaatctttc aaaggaaata
      481 gatcatagaa ctccactgaa tcccctttaa actttatgaa gcaggaggag aaaaagctct
      541 aagtagggaa gcttgacaga agagccttga actattttct gaaggaaaga tgagaccctc
      601 cctaggctgc cacaaaacat cttttttttt ctaaaggctc ttctgaactt tgatatgtgc
      661 caagacaccg ctattgaaag ctgtataatt atgtgctata gccactgtag aaaatgcttt
      721 gttcaccaca acaaagaaca ataagcaaag taaagtgaca ttacactgta tctttttctt
      781 taagaatgtt gagaaaggtc acggtatgtt ataactaata aagc
//
LOCUS       KCKM01001230             726 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19495apa ultra-conserved element locus
            uce-7122, sequence.
ACCESSION   KCKM01001230
VERSION     KCKM01001230.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 726)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 726)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..726
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19495apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>726
                     /note="ultra-conserved element locus uce-7122"
BASE COUNT          221 a          128 c          130 g          247 t
ORIGIN      
        1 ctgacctcct ttggccagtg cctttacctg cttctccttc ttttcccatg ctttaatgat
       61 gattccaggc cgctgctacg tttcttattt tctaatgctg aagcagagct gaatatttaa
      121 aaaaaaaaat aacaaccata ctgctttgag gtttctttca cattaagcta catttaatat
      181 tcatttcaca ttttttttct attaattaaa agtaaaccgt gtattgtatg gtacattatc
      241 cctctaacag ccccatgtgg agatcatgaa gtggaagact aatggtgtag actttagcat
      301 ttagttttaa ccagaataat ttacatatct gtgagaaggg tccgaggcat ctgtaaataa
      361 gcagaactct gagatatcaa gacccttgct tagtttactg tggactggag agccatgggc
      421 tgtgtattta ttccatcagt cagctaattt aatgagactt tatacagcat ctatttctgc
      481 agaagacaca aaacttatta ttaaggagag gcatgtggca gtaagaaaaa tgtgtttgtt
      541 tgctttttta ttctattacc cccaagtagc aaaggtgatt ctattcactg ttcattaaag
      601 tttaccttta taatttatca aaggagaccg atatcaacag ctttatgctg agatttcaaa
      661 attcgagact gattaaaatt taatgtaaaa ggccacagat ttggggtggg ttttcaagaa
      721 aaacag
//
LOCUS       KCKM01001231             933 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19510apa ultra-conserved element locus
            uce-323, sequence.
ACCESSION   KCKM01001231
VERSION     KCKM01001231.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 933)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 933)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..933
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19510apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>933
                     /note="ultra-conserved element locus uce-323"
BASE COUNT          271 a          169 c          160 g          333 t
ORIGIN      
        1 aaataattgt ggggtgtaca catttgtcaa tatatatgca ggaatatatt tctagtatag
       61 aaattggcaa catatgtttt ccttatttca gtttaaaaaa agaaaaaaaa aagcagggat
      121 gtttgctcct tttcagtttg ctttagcacc tttgtgtatt cactgttttt gtttaatttc
      181 tggttttctt ctgaagacca ttcaagtacc aaattaattt ttctaattaa tgtttcatat
      241 cctttggtgt taaggtttta atttccaaag agttgaacac cacaaacgtg ggtgatgcac
      301 tcccacatta tcaaataaat gctcaaggta cggcttataa tgctgaaaaa tagaaaaata
      361 aattgacctt gatgaagtgt gtcttctttt gtctgttccc aggaaagttt atttcaggta
      421 tttctactgc tgaaatgatt agagttaaca gctttttccc tccattttat tttacagggt
      481 ctcttcatct tcctgatata tggggtgtac aacgcagagg taagtctgct tggagtatct
      541 caaggctgac agagtgaatg agagaaatga caggtttctt atcttgataa ctgagggaca
      601 aagttggctt tccatacgag tgtcctactg cccttcatgc ttggactagc ttatatgcat
      661 cccagcttac cattaaacac agacaccctg aataaaggga cagactcatt tctcataggc
      721 actgactaat attttactgc tgctttaagt tttttgaatt cctggtcttt cttttaacac
      781 ttagctaaac tcaacactcc tcagctttct ttaattccca ttttaaaatg aactgttcct
      841 ttacatgcaa ttcaaaggaa actatttcag ctctaaaagg aacaggtttt acttgctaga
      901 cttcaaattt ttgctcggtg tagaaattgc ctc
//
LOCUS       KCKM01001232             564 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19526apa ultra-conserved element locus
            uce-7978, sequence.
ACCESSION   KCKM01001232
VERSION     KCKM01001232.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 564)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 564)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..564
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19526apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>564
                     /note="ultra-conserved element locus uce-7978"
BASE COUNT          133 a          169 c          150 g          112 t
ORIGIN      
        1 caggtcgcgc agagcccgga atgccccgtc ttcaatacag ctgatctggt tgtaatccag
       61 ttgcctgtta aacagattag gggggcattt gtaagggaga gaggccctct gcaggggctg
      121 ccggagctag gccacgccat ccaccccctg ccctccccaa aacggggacc gggcagcgag
      181 gggggcccgg ggctgccgcc acaccgacac cccttcttct tccgatccgc ctgcgccctc
      241 gccgagccac cctgggaaag ctccagtaaa taataactgc gccttatatt aaatgccaaa
      301 ggaatgcaat ttcattacat caagaaaagc tatccattaa aagctctcag cgtcatcttg
      361 ctgaaacaat ttcattaagg taaaggacgg taaatcactt aatgtcacac gcatcccctc
      421 ggtgacctaa cagaatccat ttatcagagc agcccagctg catgttaatg ccacctgccg
      481 cggtggggac cggccagaga caccactttt cggggtctct ccgcgtgcat gcacgcctgg
      541 gccaggcggg aggagtgggg gtgt
//
LOCUS       KCKM01001233            1027 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19542apa ultra-conserved element locus
            uce-1835, sequence.
ACCESSION   KCKM01001233
VERSION     KCKM01001233.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1027)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1027)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1027
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19542apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1027
                     /note="ultra-conserved element locus uce-1835"
BASE COUNT          324 a          179 c          224 g          300 t
ORIGIN      
        1 gaggtcgatt ttaatctcaa aagcccactt tttaattgtc attagaaact ttcatgctag
       61 ttcttctagc ccctaaagtt agcgctttaa aactgagtaa gacctgaatg gagtagaaat
      121 ggcatgttaa acagtgcttt atttggatta cattgccttt cattatgctt tgttacagca
      181 gcttttatgt acttagaaat aaattagagg aatttcaaaa agccagccag gtagtagaaa
      241 actgcaaaat caagtgttcc ctgaagaaat accagggtgt tttaataaac aaataaggac
      301 atttggcaaa atcgtgaagt ttatgaaatg cgttagcttt ttggttgcga gcatgatatt
      361 tggttgttta ggtaagtgcc ttactaagtg tttgtggaaa ggaaaaatgc aacttacaag
      421 tgatgttttt tcttcttgtt tgttcttttt aacagaaagg gttcaaagac accagtcagt
      481 atgttgtagg agaattggca gcactagaga atgagcaaaa gcaaattgac acccgtgccg
      541 cgctggtgga gaagcgcctt cgctatctca tggacacagg tacggtgccc aattacactg
      601 taaacagttt tggcaaattg agcgttcaca aactcttata gagttttgga agtgtgaatc
      661 tttgaagcct gaatgttcag caaaactgcc ttgaaaataa aaaggctgcg atttgcagcc
      721 acctctctgg gccctggtga taagagtgcc ttcatgggaa gtgataactt gccctgatac
      781 cgtgtgagcc agcactattg aacagtgtgc tcatccatgc agagttggaa tacacatctg
      841 tgcctcattg atatgccact gcttaaaaaa aaaaaaaaaa ataagatctt cactgttcta
      901 ctgattcagt gggaaaaaaa aaagatttgg ccagctaaag ccatgtattg catgaaacag
      961 agcacagtac atgggggaag gctccattga ctagatcact gaaatttgag aatactatct
     1021 ggttact
//
LOCUS       KCKM01001234            1020 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19557apa ultra-conserved element locus
            uce-3069, sequence.
ACCESSION   KCKM01001234
VERSION     KCKM01001234.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1020)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1020)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1020
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19557apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1020
                     /note="ultra-conserved element locus uce-3069"
BASE COUNT          265 a          209 c          231 g          315 t
ORIGIN      
        1 ttgcatcttt ccttatttat aggattgcaa aagggcacca gtgccgctca gcctctgaag
       61 tggtgctgct ggtgtcccaa agaccaaaat attttccata aactctggat tgcaccttgc
      121 cctcagcagc gggcttgact acctctggca gaagcccatg ccatgctttg ggctgaaatc
      181 ccgcatttta aaacccgctg aggccagcgt agactttgga tgcttatata aacaggaaga
      241 ctttagcttg taactcctcc taagcccgca cctgatgagc cgctcagagc tagagggctg
      301 tgtttcccct aataaattcc tttttgtgaa cccacttgtt agtcaagcgt tgtgcacact
      361 aactacagca agggccctgt gtcttgggca taaattactc tcgcgtggca ctgtctccga
      421 gcagcccccc agttatggat tactttgttc tcgacttgac aggaacataa ttagaactgt
      481 tgatgaaatc taccaaattg ttcctccgtg gcctcaatgg tcaggaaatt tggctgagtc
      541 gtatttgtca ccgacgtaaa ggctctaaac acttcatatt aactatgtta ttaatgtgcc
      601 ctctaatctg tccgtgaatt ggtaacactt ggagggagct tgtgctgtaa tagcaccttg
      661 tgatgaatac attgaaatgc tgttaaaaag tttctggagg gtggggaaaa aaaagtaaaa
      721 aataaaaagt gaacattttc aggttgtttc ttttatccat atgtgtattt ttatgttatg
      781 cagttttatt ttgtttaatt ggagattcat ttaggcttta cattgacaga ccgttttctg
      841 ttctatagga tttgctgaca gttgggctgt ttcattgcca gaggaggctt tgtgtgtccc
      901 aaaggaagtg agtgatctgg ccataacaaa tcctgccaaa atattttaac accgttacga
      961 ttttctaatg caatgcgtag tgaatgtggc tagaaaagga tggtgagtcc atgaaggggg
//
LOCUS       KCKM01001235             727 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19572apa ultra-conserved element locus
            uce-4830, sequence.
ACCESSION   KCKM01001235
VERSION     KCKM01001235.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 727)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 727)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19572apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>727
                     /note="ultra-conserved element locus uce-4830"
BASE COUNT          244 a          133 c          137 g          213 t
ORIGIN      
        1 tcagtcttgc aggggcaact gtaatataaa aaggcagtga actgaagggc tgtagagcaa
       61 atctcaacaa tgtatttctg tgtaaaacat aagaattgct acaattatca ttacttttaa
      121 tttttgcaat tgtaacaatt taaacccgaa catgggacac acaagcaaac acgctgctgt
      181 agtgtttatt tctttcccag tacggtaaga aagaaccttt taatagttta attttgtgag
      241 tattaaacaa ctagtgtgaa aaacaagctg catgtaaact atttctactg cctctgcttc
      301 aatgactagc tgaggcaacc tgttatagga ggtgttaatt ggcaatagga gtacaagtca
      361 gaagcatgtt ccccatcgtc ctaacccagc aaggctgggt cattaaagtg gaaatgaatt
      421 ctttcatgcc ggcttaaccc tttcagtaca tattttcagc tgttatatct aaatacaatt
      481 gagaaagatt aactaaaaaa aggagagaga aaaaatttaa agtagtattc accccctcct
      541 ctttttcttc ccttcccttc tctatctcct ctaaaacaag cgtttcagat aatcatgaca
      601 tttgttatat aggtgggggt ggagaagggc agctaggtac acatgcaagg acaatcattg
      661 taaaataata atttatcata ttaaaggatg cgtggaaaga gcaggcactt ggcgtaaaaa
      721 ctaccac
//
LOCUS       KCKM01001236            1073 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19588apa ultra-conserved element locus
            uce-6106, sequence.
ACCESSION   KCKM01001236
VERSION     KCKM01001236.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1073)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1073)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1073
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19588apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1073
                     /note="ultra-conserved element locus uce-6106"
BASE COUNT          356 a          226 c          186 g          305 t
ORIGIN      
        1 tacacacaaa cacctcggca cataactgga tgcgcacatg catacacatg ccactctcct
       61 tctttggaag gaatacatta aagtatttgc actttgggat aatgaaggaa acatgtaaat
      121 acagcactcc attctttcaa gaaaagctta ccaaatgcac ataatccact ccccctaaat
      181 tatggtagaa gatgggtcat aatagctgat gtaataggca agaagggaga atggagcaca
      241 attccctaaa ctcaataaaa taagcaatta ctcttgttat ctgaatggcc ctgtcagtgg
      301 agaagttgtc tgtgtcataa cagaatctaa caaagcctgt tgcctttaag catcaaaggc
      361 tttggcctta ttatctctct cagatgtgca tgtataataa gttttcccaa caaatggcaa
      421 ggaagcatct ctggcaaaaa ataaaatggt gataaactat gtccaaatga ttaattcaca
      481 gaaattcttc atcacactgc agctacatgt gcccgtctct tctgttatgc ccttggagat
      541 tttcatacta aacgtatgtg catatttttc atggccactg atatttgaat tgcagcctgc
      601 tcccatgcag aacataaaac acttcaaact gcataatgct gactaaatta taagttctcc
      661 agtggcccga ggtagcaagg gccataataa tgagtgtgct taagtggttt gtgtagattt
      721 ttttcccctt taattttaat gccctgactt gctgctgcct tttctaaagc tagggattgt
      781 ctcatacaat cgtaacaaca gggaaatata aactgcatta cgctttgaaa aaatgtagga
      841 tgcaaagcag aagcttcagt catcaagcac actgatagtc aattcagccc tgtcggtcac
      901 atggaataga aaatgattta gtgactttgt ctatacttgt aatcatattt gggctgcttc
      961 atatataagg acaattcaga ccacatttac tgcatacacc aagaagctgc aatccttcca
     1021 gtcacattca tactgcacac aaaaaaccca aaaacaaaat aatacacagt taa
//
LOCUS       KCKM01001237             518 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19604apa ultra-conserved element locus
            uce-2770, sequence.
ACCESSION   KCKM01001237
VERSION     KCKM01001237.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 518)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 518)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19604apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>518
                     /note="ultra-conserved element locus uce-2770"
BASE COUNT          181 a          100 c           74 g          163 t
ORIGIN      
        1 ctagcaatga ctcccgccag cttcctcagc atccacgggt gcatccaccc aggcatgcat
       61 aatttttggc atatacgtac catataagag aggatttctt aaaataattg tttgttccta
      121 atgataagat gaatattttg acaaaagttc attgaaatga aaaacagtca ctgaattctt
      181 tgcatatttt atttttcttt ttgatttcca actcacacac atctggcata ttttacatct
      241 ttgcaataaa acatggttac aatagcttaa ggaatttata tatccaaaat atttcaccat
      301 gatctcaaga tgaaatgaac ttgtcttcca gatgttcaat agtctcccaa ttctaagcta
      361 caaactcaag atattgctta cagacgggtg atgaataact taatcattag gctgatcccc
      421 gtgatttccg aatcttttaa atacaaacaa caatgaagaa ggaaattcag tgctaaactt
      481 actaatacaa ggtggataac aaataagtaa tcacatca
//
LOCUS       KCKM01001238            1148 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19618apa ultra-conserved element locus
            uce-2037, sequence.
ACCESSION   KCKM01001238
VERSION     KCKM01001238.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1148)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1148)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1148
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19618apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1148
                     /note="ultra-conserved element locus uce-2037"
BASE COUNT          329 a          197 c          232 g          390 t
ORIGIN      
        1 ggagagacct gcagggacat tcacagtcct tggtttgccc tgtttggctt ctgtggggga
       61 agaaccttaa cctttgatct aggttttgat atgcattgtc ctgttcaata cccagaaaaa
      121 aggagaaact ggccctttct gctattttct ttcctgataa cgtttaaaac atatttaatt
      181 cctcacctaa gaacaattaa tcttgaccct ttttgaactg gttagcaggt gataaacgtt
      241 tattctctgc cataattagc agtcctttgg tgatcagcac aatataagaa ccaagatgga
      301 gaagaatgcc tgtttgtaaa ctaagagaat agggattttg aatttttgct tttcagcttt
      361 aagaaaatct tctaacctgt atgggccatt cttttaggtc aatttcatgc agactatttt
      421 ctctttttct atatcaatcc taaattaata cagtaggtgc tctgcagcca gcatggtttt
      481 gcattgatct tggccagctt gtttacagtg ttttggcaag ttgctgatgt acttgtccct
      541 ggggatagag caggggttaa ttgctgttaa actctcagtg ccaagtaatg gttcagactc
      601 tgtgctacat taaagatgac actaataagg aaagagtgca ctggattgct ctgtgttgaa
      661 aattggactt gtggtgacag aaacttggag cagagctgat gtaatagcga ggccataatg
      721 taattataac tgctgaacat gtgtcatacc aacttaaatg atacattaat gaatcaaaac
      781 aggtgatgga gtgttgctct tccagcagat agaggtcttt tcaaggtcag attgtcatta
      841 atttaataat ctgtaaactg gatattcttc aaattataac taaaatcaac tctaatgtgt
      901 gggattttta gtgtgtttct tgtccttacc aaaggggtga gaaaaacaga agatgttatt
      961 ctcagtataa tgttgtttat ccttctttta ttacatctct attataccta atacattatc
     1021 tatgtaccta atatttttca gccaggtgtg atctctgttt ccctgtgatc tgagcagact
     1081 gaacacaagt caagaactgt gtagacatat aagtatactg ttgagctgag ctaataagct
     1141 ttgctgag
//
LOCUS       KCKM01001239             967 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19634apa ultra-conserved element locus
            uce-5682, sequence.
ACCESSION   KCKM01001239
VERSION     KCKM01001239.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 967)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 967)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..967
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19634apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>967
                     /note="ultra-conserved element locus uce-5682"
BASE COUNT          284 a          206 c          208 g          269 t
ORIGIN      
        1 tttttttttt ccttcggcac tcactaagtg ctacttactg taaatgcctt ttttgtgtta
       61 tggtgagtat tctgagtttc aatgtgatgc acttaacatg tccatgtaaa tttttaattt
      121 ttggaaccag tcacttcaca cttgctgact ctaagaaagc tctagcactc acaaccaaaa
      181 aactttgctg gaaatcggct acaaggccta aaagtctatt taaagatgca aatgtgtgtg
      241 aatagttagt gcagatgttt ttctacacca actgtacttg ctgagtttca ccatttccat
      301 aaagcacatt aaaacaagtg tgtgaacact ctgagatgaa agtaccaagc actcctgaga
      361 cttccagtgg aaagtagagc tgcctgattt ttctccaagc agacaggaat gcccatgatt
      421 cagcagcctg agtaaataaa agaggtcctt atttcctaat tttgctggct ggccacactg
      481 cagcagtctc tgtgctgctg ccaaagggga tgcaaaactg gaactacacc caggagctga
      541 aggactgtct ttgttagcca gccaggcctt cctgaccatc ttctggcaac aaaactaccg
      601 tatcctgcaa ggaagacctc catctcaggc ttgatagttc tctagtctgt ttaataggat
      661 gaaacaacag attttgcctg gtctatgttg gaagaggaca gctggaaact cagttagtag
      721 cagagtaaca cctgttcagt catatttatg ggggagagtg ctcgctaaca gaaaagtgaa
      781 gtaataccag aaggagttat cccgagggag gaagggggaa acatcagagc acaaaagcac
      841 ctctgtagag ttagcagcca gccacttgtg tgccaacccc agtaatcgtg aggtcttaaa
      901 agtgatctta ttcctagtgc tgctgactga attaacagta ctgcttcaga aaaaagtcac
      961 ttagtca
//
LOCUS       KCKM01001240             866 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19650apa ultra-conserved element locus
            uce-273, sequence.
ACCESSION   KCKM01001240
VERSION     KCKM01001240.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 866)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 866)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..866
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19650apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>866
                     /note="ultra-conserved element locus uce-273"
BASE COUNT          287 a          178 c          167 g          234 t
ORIGIN      
        1 cccttttaaa tgacacctaa atgaaaataa catgattgac aagaacctca caaacaagcc
       61 ttggcaacac taaatgcaag tccatctctt cagcatttta agcaaaattc cttcacaact
      121 gttgtctttg caataactcc tacaaagctc attagtgcca gccttggttt atcccccatg
      181 tcgcgcattt atccctggga tgcattatca acatgtggca catgtccttg acatgcacag
      241 aagagttgca ccccaggata gcagcatgca tgacaatagt gttgactctt actcctttat
      301 ggttgctggg atgtaaccga gaaatctaat aactgtgaca gtaggccttt aggtttttcc
      361 ttgcctttcc agacagtgaa gctgcacaga cactaatgaa aggttaaatg aataggaata
      421 gctgacaaga ggtacaataa agaagggact tggtaatcca cagacactga gcagagatcc
      481 ttggctcaag cagagaaagg acagcacatc gtcgagtcac aatatttaaa acagcttgct
      541 atacacagag gcttttgtgt ctgggtacat gtctggcttt ggaagaaaaa aagatactga
      601 aaagaaattt cagcatgggg cactttggca aatgtcaggt cacaaaaagg gaaaaatgtt
      661 ttttgtttgc tgttacatct ttgtattcaa cattaaaaag cattgactaa aagcacaaat
      721 cacaagtttc aaaatagtac gtatttgaca aatacgataa agttgcaaca ctaattcact
      781 gtgattccag ctgccagcac gatgggtgtt gtgcatacac tcagcttcat ttacagatga
      841 taacagttca taataagctt tacaca
//
LOCUS       KCKM01001241            1046 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19666apa ultra-conserved element locus
            uce-1988, sequence.
ACCESSION   KCKM01001241
VERSION     KCKM01001241.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1046)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1046)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1046
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19666apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1046
                     /note="ultra-conserved element locus uce-1988"
BASE COUNT          284 a          211 c          230 g          321 t
ORIGIN      
        1 gattctaaga gaattaggtg atgcaggaac aggaagaatc tgagtagctt gcatttaatt
       61 agcacttact ggtacaaaat aaattagaca gatttgtctt gttttatgag caagatcctg
      121 tttttctatt tcgttttctt tgtgcttttg gtaaggacag atctggctct ttggatacta
      181 aataggcaac taattcaatt ggtgctttct cctagggtct gcttgcaaac cagtgccagg
      241 ctcacaggct ctttgtgtac tgccctccct gcatgtgtct gtgctcccct ggctagtcag
      301 tttttttgtc tctgatggtt aataagcttt gagcctagta gtcaaatgtg gtgggaacgg
      361 ggacaagacg agggtcctta gtgaaggtgt ttgttgttaa atagaacaat tcagctgtct
      421 ctttagaaaa cttgacaaaa ggaaatgctc cctgctgaaa attttcttag cctgttgcac
      481 aaaagatgaa gtttgtttaa gaaattgctg ctaaagaaag cgtcaaccca ttaaggtaat
      541 tatatggaac ctgtgccgta taacagctta attgatgtta atgtttgtct aattggtgat
      601 tgggagagtg caaaggacta aaggtcttca tagcactttc agtcatggct ctgaaagggg
      661 ttcttctggt tttcacagtt ataacaatgc ctgcgcgtct ttctcagatt acgccttgtt
      721 ttcagcccct tacagcattc tgctccacta cttaaagcgt aaaataaggg tgaagagcca
      781 ttgtctaatg cagccttttt caaagagtgt ttctgacagg gattgttcta ggaatcaggc
      841 aggagagaag ggagtgcgag aggtgaaagc cactatcacc cacttgtgtc acatccccaa
      901 tgagcggcaa gagccgccta attgctgcgt ggtttttttt tacctccaaa cgcccattct
      961 cttaaacaag atccttgcac cagtgccaca tgttcctgtg gaatctatca aacaaaacaa
     1021 aacaaaaaac ccaccccaac cttgct
//
LOCUS       KCKM01001242            1174 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19682apa ultra-conserved element locus
            uce-6049, sequence.
ACCESSION   KCKM01001242
VERSION     KCKM01001242.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1174)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1174)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1174
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19682apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1174
                     /note="ultra-conserved element locus uce-6049"
BASE COUNT          259 a          267 c          251 g          397 t
ORIGIN      
        1 taatatccag aagatgggtt aatgaagcgt acacagcgac tcgttactgg tgttacttgc
       61 tttatggata ccacggctac acatttggaa gggctatggc tatttttctg ccactacgtc
      121 tcgattcaga ctcttgagcc tggtttgacc ctcttcctgc tggtaggtgt gactgacttc
      181 tacccagtaa gggctacaaa tagcctcgct tggatggtgt tcatgaattt aatattccca
      241 tgctgcttct gcacttcttt tatttcactt agttgagtta aaagcccaag tgaaaagcac
      301 tgctacgctc tgtttaactg gtgtaaaggt cttctagtca agaagtggca tgtcatttag
      361 aaattcactt gatggttatt tacttgaatg gttttgaaaa tgacgatgtt gtttgttttt
      421 ttgttttttt tttttctcat tcttgaaccc ctgttttata tgtctgtgta ttttattttt
      481 tttttttttc ctctgcctag acctggttaa ccatttctgt gaacaggtcc tcaatttttt
      541 actttgtccc tactttcctg tcgtagcccc atcttcccct ggtgtcgact ccgtaccctt
      601 acagcgcaca ggcagtcaac acggcacaca gaacgcaaca gcgaccttcc agagggccag
      661 ctatgcggcc ggcccagcct ccaattacgc agacccctac cgacagctgc agtattgtcc
      721 ttctgttgaa tcaccataca gcaaatctgg gccagccatc ccacccgaag ggaccttggc
      781 taggtcacct tccattgata gcattcagaa agatcccagg tgggtgaaac cttccttgtc
      841 tactatttct tgttctcggg cacaggttcg tagttgcagt ttgctttgtg tgtttctgct
      901 gttgaatatg aaagaaacaa aaccaaacca ccttgatttg tacgtggaag attttgtttg
      961 cctaacatct ttgtcctagt gctttacctt ggaaggcttc cttgagctct tgtgtgaaac
     1021 caaatgatag gtgtggtctc aagtgtgtgt atttgacctg ctttcggtag cacgagccct
     1081 ccaaagctta cggaaagtaa ttttctctga aagtgggagg agtggtatga ttgctttggt
     1141 tctgtgacct cgtggattca actattaagt tgct
//
LOCUS       KCKM01001243             362 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19698apa ultra-conserved element locus
            uce-253, sequence.
ACCESSION   KCKM01001243
VERSION     KCKM01001243.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 362)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 362)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19698apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>362
                     /note="ultra-conserved element locus uce-253"
BASE COUNT          102 a           77 c           59 g          124 t
ORIGIN      
        1 tacacccatg cagtgcttta ctggatgagt gctctttgtt tctggaaggc agaggacacg
       61 caggcctgga aatgccaacc agcacaggcc cacctctcat ttgtctcact tttataactt
      121 tgaaactctt tcttcacttt ggtaataatg taaagtatca actaaaaatt gcaatgcatg
      181 catttcattt gagttttatt gccttaacag acagcattag attacaaaag aggacatttt
      241 tcttctcagt tttagcttat tcttatgatt tatgattaga tacagcaaga gttcataaac
      301 ttccctgacc tgctgacagt ttttacaggc tccttgattt atttccatct caaacttaac
      361 ag
//
LOCUS       KCKM01001244             814 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19713apa ultra-conserved element locus
            uce-5646, sequence.
ACCESSION   KCKM01001244
VERSION     KCKM01001244.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 814)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 814)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..814
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19713apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>814
                     /note="ultra-conserved element locus uce-5646"
BASE COUNT          269 a          167 c          168 g          210 t
ORIGIN      
        1 tgttagaagc actggcacag tccatttttt tggatttaat gaactttgcc acttctagaa
       61 atgaaccaca gaatcttctc ttatgccaat tcacagtccc ttttgctact tctggctcag
      121 atccgagtat taattctgca gtttcaagac atcttacctg aattcttctg aagaaatgag
      181 tatacatgca caggcataca cacgcaacca ccgaagctcc aaattaaggc taatttttca
      241 agtgttccag ctagatctag agcaggtacc gatcacggca gcagcaagga tctgtttcag
      301 cgtgtgttat acccagcaga ctgtgtcatc agaaatcttc cacaacacaa atcagtctcg
      361 ttattgaaat agtgaaaacc attaccctag tatcttctaa ctccctctgg agtttgtcag
      421 ctttggtctt ttcaaagagc aggctctgtt caagctcctt aatgcgggca tgctccagtt
      481 tggtctgcgt ctgttagtaa aaagggaaag gaagagaaca caacggtgcc accatcacat
      541 gccagcacaa gaggagggag ccacatgcag gccgtgctgc cagaatcttc taccaatgat
      601 gagcagagaa gatgcagggg taaaatgaac aggggaatgc catggatgag aaagatgggc
      661 tgaaagtgta aatggactga cgtgtaataa aaaacaaaaa aaaaatcaca aacgaagaaa
      721 tatgaacaaa agtttcatgc agccaagtag aagttattta tcagtacatg aagttttcag
      781 cacaaattag aatagttatg taaaaaatat atat
//
LOCUS       KCKM01001245             875 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19728apa ultra-conserved element locus
            uce-4832, sequence.
ACCESSION   KCKM01001245
VERSION     KCKM01001245.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 875)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 875)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..875
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19728apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>875
                     /note="ultra-conserved element locus uce-4832"
BASE COUNT          267 a          163 c          173 g          272 t
ORIGIN      
        1 tgagacctct ggatccaaaa tcaatgatct ctcttcctaa atacttctgt cttgcaacta
       61 aaacactaca gattaatacc tattaaaaat gtactcggtt gtcaaaagac acaaactgat
      121 cggaattcat tttacaaata ttaatacaga cttgtgtgaa aaacaaaaga taaatgtatg
      181 tgaaccctga taacctcctg taacattgtg ctgccttgta gatggtaatg tgagttctct
      241 cagtatttat gttgaaattt ctaacattca acctagtcct tattctgtta atttaataat
      301 aaaagatgct ttatccattt gtgcaaaggt aaacgcagat tgtatctttt ttaatggtac
      361 ggcataaagt aacccttaaa tgaagctgct ctatactata gagtacttta acatgtatag
      421 atatcttgta aacttgtatt gtggatgtgt aaataatacg ttctttgggt ttttaacacc
      481 gcatgtaaag tcaaaataaa atattccaat gtaccatgtg tctaatttca ttattactga
      541 agttagtttt aggtgcagtg ttgttgggat tacaacagag ggaaaactcg gcttgcctgc
      601 agcagctctg tgaggaaggc acacagctcg tcagcctcac gggggactca cagcaggggt
      661 gtccctccag tttcatcgca gccacacgtt gttgatgttc caggggacaa gtggctctag
      721 atgactgagc ttcctgagtt aaatataaaa catcaaagta actggcgtgc agtggcagag
      781 tgcagtacag cccgtatgac acactaacca gatgcactga acttgaatat atgcccgtat
      841 tgttggagtt tgattcaggt ttcagctgag ctctg
//
LOCUS       KCKM01001246             648 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19743apa ultra-conserved element locus
            uce-3033, sequence.
ACCESSION   KCKM01001246
VERSION     KCKM01001246.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 648)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 648)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..648
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19743apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>648
                     /note="ultra-conserved element locus uce-3033"
BASE COUNT          180 a          130 c          202 g          136 t
ORIGIN      
        1 ctttgcaaga gagaagcttc gttgaagaag ccatgagtct gctattctgg gacagaaaag
       61 gcaagagaaa gggaagaatt tactgatgat gagctctggc aaccgtgatg ggaggcaaaa
      121 agatatggtg gtaaacagag ggactggatg tggataggca gggagaatga gagcaacaga
      181 taggagtggg agatgccaga ggggtgggaa gcggggggag gaggtgagtg agtgagccag
      241 gagaagacag cgtgactgtg tctgatctac actgacgagt accaatgtta actgtcacct
      301 ctcatctcca aactaaatca cacctggaat tggaggcagc gaggagctga tagagtcagc
      361 cttagagagc cgacaagtca atcagagcgg agatgcgtgg agagacacca gctttatagg
      421 gctcggtgcc ttcattcatt gcgggattta cacctgtcag cttctcggcg gggggagtgc
      481 gctggggact cacttcagca ccacttaaaa tgggacaaca ggcacattac tgcaatcacc
      541 ctctgctctc cttttatccg gagagggtgc gttttatgtt acagggagct cagctttctt
      601 agctagctgc atttgaagct gaacacacct cctgccatga gcgaaagg
//
LOCUS       KCKM01001247             782 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19758apa ultra-conserved element locus
            uce-5906, sequence.
ACCESSION   KCKM01001247
VERSION     KCKM01001247.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 782)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 782)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..782
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19758apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>782
                     /note="ultra-conserved element locus uce-5906"
BASE COUNT          188 a          205 c          183 g          206 t
ORIGIN      
        1 acgtactatt tgttaattca cattgtgtac ttggccggcc aattacatgc atggccgtat
       61 cgtgtgaccg cagcagtctg gtgcggtgca aggaatgcca catcatgtga gacgtttcat
      121 ctccacgagt aactcagtca ctggggtgga tgaatacagt acctccagga gaggttagac
      181 gtattgaccg gtgcctctag tcaccataca aatgtcatcg ggtttaattt ttccttgccc
      241 ccctttcttg ttttcccgac ccattttggt ccctttttca cttctcccct tttcccttaa
      301 gtagagatga cacagatcaa tacctttgat ggaaagtaat aatcaggcct attaagtgac
      361 aaaggtttac tctgtaacag ctgtgctggc gggagaggag agcttgtctg actaatgaat
      421 catgaaacaa tcaggcagta gccatttgtg tttagatctg taaatatggt gtggttcaag
      481 tgccagacca tctccagcac tccagctggg ggcacagatg gtccacattc agaacagcac
      541 aagtgtaaag aaaagcttct cccctcctcc cccctctccc tctctgtccc atactgcccc
      601 tctcagaggg acagatcagc tcacttgacg accagctcgc gttgcgggca gggattgcag
      661 catcggcctt ttaaaatccg cggctcccag ccaaacgtgt gctcccctgc ttctccaagg
      721 gggcgaagaa aaggcaggaa aaccctggcc aagtccagcg tttggggcta aaaattgggt
      781 tt
//
LOCUS       KCKM01001248             543 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19774apa ultra-conserved element locus
            uce-2213, sequence.
ACCESSION   KCKM01001248
VERSION     KCKM01001248.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 543)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 543)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19774apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>543
                     /note="ultra-conserved element locus uce-2213"
BASE COUNT          180 a          102 c          101 g          160 t
ORIGIN      
        1 aaacaacagc tttacatcaa atgataagca cagttgaaat ctcgtccgag tattacctgt
       61 ctcgccttgc atttagaact gaagactgtc cattcactat ggaatgatga gttattggtg
      121 gtgatgcttt ggaagtggtg gaggaggtag tagaggagga attgttagta gtgaggtcta
      181 gccctccatg tttaatgcca ttgtcttcca tactgtgaac tccagtcact tctttccata
      241 actgctgaat ctcagcagga cttaagccag ctataaaatg aaagagagcc ccactaatat
      301 aacaaaataa agagtttcat aaaatgagct cagtgttatt aatggattaa tgccaacaat
      361 aaagctgatg ccgtttttcc agcacaatca acatatagta aaacataaat tcatttttca
      421 actgtcagaa tccaggtaat ctaactgtct tctctcgtgt tataaacagt caattagaca
      481 tcacccattt taataatatt atactccttc tgaaaataga gctcagggat caaagagtga
      541 aag
//
LOCUS       KCKM01001249            1047 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19789apa ultra-conserved element locus
            uce-2211, sequence.
ACCESSION   KCKM01001249
VERSION     KCKM01001249.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1047)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1047)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1047
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19789apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1047
                     /note="ultra-conserved element locus uce-2211"
BASE COUNT          310 a          235 c          209 g          293 t
ORIGIN      
        1 agattgtttg cacgtaacca gaaacacagt gttaagatgc agaacatata atgccgacat
       61 ttcagaagag aaactttctt atctagctcg ttggtgaata gcaaatgacc gtaacaaccc
      121 cagaaagcag aaaacaagca atatatttgc aattgtcttt tacaaaaagt gcttggaaat
      181 cctcctcgct cagagttaca atcacctagc aacctatgtt actgctgctt tcagttttga
      241 acaggcagcc ttcacattca aagatgcatc tgagccaact gatgcaactg caagtttaaa
      301 gcaaaacaaa accaaaagca gagagtatta tttttttttt ccgttattta aataaatcgc
      361 ccctaccttt cttctgagag tacgatggcg actgcacttg agaaaaagta ggtttttctt
      421 cggtgaaata ttcaggttgg ttgtactgat tcagggccat gtccatgtca gagtactcgc
      481 ttttaaacac gtttccaggg taactacagg tataaggctg attcaccgcc caggcctgtt
      541 ccatatatat gttgttaccg tgcaggacct gagcatcgca actgctgtaa ccctgattct
      601 cttcgatata tgtgcaatag tcagtggact gcatgtagca gttgctaccg gcagctgggt
      661 gcacttcgta tatttcttgc acacagtagt tcattttgtt accctatctc agcttctact
      721 ttacgtacac acacacatgc atacacatgc aggcatgcat acacatggag tgatgaatat
      781 acaccaacaa agtcgacggc aaaacagccc cgtttcactt tggagcagca cctgatgtgc
      841 taaaatccta tttatattgg gacagcttgt gaactcccct gccagtcaaa catattggga
      901 agcagattta tgacagtcaa aggtcttaat ctgtgactgt aagttaattc cgagggaaga
      961 tggcagacag gtagcaatga ccaccagaca aagaagtggc atcccggcaa ccctcctgtt
     1021 accctgtttg tctggaataa tcatttt
//
LOCUS       KCKM01001250             400 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19804apa ultra-conserved element locus
            uce-6413, sequence.
ACCESSION   KCKM01001250
VERSION     KCKM01001250.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 400)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 400)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19804apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>400
                     /note="ultra-conserved element locus uce-6413"
BASE COUNT          131 a           63 c           89 g          117 t
ORIGIN      
        1 aaagatattt ttttaaaaga ttgagatatc aggggacaca cgactgtttt tatgatggag
       61 ctgcagatgg gagggcactg tgaattggtt tactctgcca gccaaaccag gaaagaaaag
      121 aaagatcaga aacatttgaa aatgagatca tacagcatgt gaactataca gacatctcgc
      181 ccatgttttt tttatgagaa gtcttactga catttgaaaa gtagggacct gttccctagt
      241 cttaaggttg actgacattt aagggcagcg taaggcatga tttccttcct ctctttttaa
      301 attgaagttt tcataaatca gggtgaggga gaagcctggt tacatctcgc aaagcattaa
      361 gatctgtgta gaaatatgaa aaaagtaacc tgtgacattt
//
LOCUS       KCKM01001251            1131 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19819apa ultra-conserved element locus
            uce-1101, sequence.
ACCESSION   KCKM01001251
VERSION     KCKM01001251.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1131)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1131)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1131
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19819apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1131
                     /note="ultra-conserved element locus uce-1101"
BASE COUNT          351 a          176 c          274 g          330 t
ORIGIN      
        1 tgtaggattt taatctaggt atattaaaca gacaacaagt aaaaattatg ctttgtgggc
       61 atcccactag tgttggaaaa caggcggcta cagtctgcag taagcagcac catctaaagc
      121 agtacctaac ttagatcttg taaatccttt atacttaaag aagaaattct gcttgctcta
      181 acatgaaatg taaaactttc taccatgagc aacaaactca tctgtcaaag ctagtctgta
      241 aagcggagcc ccgctggatg atctgaaggg cagaaaagag ctgtgccata ttccaggctt
      301 agcgagtagt ctttgggtaa tatttatcgt tgcgcgtggc cttgctttaa gaaaaacagg
      361 acgagttgcg tgtgtatgta ctgagaagtt tagccctgaa gaacaagttt gaaaaggcag
      421 aaggaaatgg agacctgcca aacttgttgg ctggagtcat ggacaagagc aaggcctgtc
      481 tgaactgcca ctcagttttt attctgcgag tttgcagggt tggtgattag agtggctttc
      541 gcccaattat gctgtgatta ttccgctgca ctgtaattga ctggggagat atgctaatac
      601 ctgtcatttg ggatgataaa agatgagcgg aggacgcaat gcattattta gctggctgtg
      661 tgatagatga gggatgcgca gagtgcttta attgctgaga agagaggtta agctgaacga
      721 acggatgaat tagaaatgag gttttttatg gcttgtggaa aagtgaaata aagggaaatg
      781 tgctttaaaa ctgtagcagc agataggagt aaacacaaca agacgagatc tttcaggcag
      841 tttactctct taatttaaat atattagaga aaacacaggt tagtgttcga taaataataa
      901 tgatgagaaa cgcttggtga gtttgtactc tcgaaaaaaa attgttgtaa aagagctggt
      961 tttatttgag gtgatatttg gtgatttgga accttttcag tttctgttgc agtacagacc
     1021 tttaaaacct catttctaag ggctgtggta ccaatgctga gtagtgtgct ttgtgtacat
     1081 aggtcagata cagatttaca taaatagtat ctgcacacat atacatatat a
//
LOCUS       KCKM01001252             223 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19835apa ultra-conserved element locus
            uce-2475, sequence.
ACCESSION   KCKM01001252
VERSION     KCKM01001252.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 223)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 223)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19835apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>223
                     /note="ultra-conserved element locus uce-2475"
BASE COUNT           84 a           34 c           36 g           69 t
ORIGIN      
        1 gcagaaatta taaggagaag tttataaaac aaagatatct tttggcagaa tatgctctta
       61 taatcaagcc tttagcatac catagtttaa aaaaaataga aattttgccc acatatacac
      121 taataaaaat aaatctgttt ccgattacta actatgcagc acaggtgctt gtttgttacg
      181 agagaggcat gttcattaat tttcagctat gaaaagtgca ctg
//
LOCUS       KCKM01001253             497 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19849apa ultra-conserved element locus
            uce-1918, sequence.
ACCESSION   KCKM01001253
VERSION     KCKM01001253.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 497)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 497)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19849apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>497
                     /note="ultra-conserved element locus uce-1918"
BASE COUNT          160 a           76 c           98 g          163 t
ORIGIN      
        1 caataaaaca gcgaaacagt taagcgccgt gctaattatt tgtcctattt ttcttaatac
       61 aaattaaatg tttcacttgg ttaatgacaa gtttgatcaa acagtttcat aaactgatgg
      121 attgactttg aaatgaattc agggggaaaa aaaaatgaca tgatgcagat ttggcagagg
      181 gccgtctcta gtgggaacag atgcccaaca aatttggcga ctagttttgt tctcttctat
      241 ctgttgcagt tcacaatcct aatgaatgtt atgtttaaat aacatgaata aagataaagt
      301 gaaaatgaat tcaactccag tttgagcagc agaatagaaa tgagcaaact gtattatctt
      361 ctgccaccta atctgggttg aatttcctct gtatcttttt ttgtttgttg aagaatcctt
      421 ttcttgagtc tccttggcca ttgacaaggt cttttgagat gaatatgaaa agatagattt
      481 aaaggttaag gccaggg
//
LOCUS       KCKM01001254             297 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19864apa ultra-conserved element locus
            uce-3623, sequence.
ACCESSION   KCKM01001254
VERSION     KCKM01001254.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 297)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 297)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19864apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>297
                     /note="ultra-conserved element locus uce-3623"
BASE COUNT           99 a           64 c           57 g           77 t
ORIGIN      
        1 caagcattat tagaggcttc acagcagatg gaaaagctac tttgttgtag cctaaagatg
       61 taaaatgcaa taccagtccc taagtggcac tggtacaact gtggaaatca tacagccaga
      121 tgaagcacat aaatttccca tatgaacaat tgttttcatt ttcctcccat gccactagat
      181 attataagtg gaaagtaaaa cacaagtaaa tatgttcatt ccactcttgt gatcagtgat
      241 aaatgaaagg ctattgagcc tgacaaaggt caaccatggc ctcgccgcag cctgccg
//
LOCUS       KCKM01001255             443 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19878apa ultra-conserved element locus
            uce-121, sequence.
ACCESSION   KCKM01001255
VERSION     KCKM01001255.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 443)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 443)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19878apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>443
                     /note="ultra-conserved element locus uce-121"
BASE COUNT          126 a           65 c           85 g          167 t
ORIGIN      
        1 gtgtttttga aaatgtacaa aatatctatc actactgata ggaggtaata tttctgtgta
       61 gaaatgaaaa atggtttgtt tttagtatta gtgtagatgt acacattcca gcaaatgtat
      121 ttgcatttat gtggtcaatg ctttgtgata taaatgtact ttttcaatgt atactttacc
      181 acttttaaaa tgcctgtttt gtgctttaca ataaataata tgaaacctcc tgtgtcggta
      241 agttggatat gtgggtatat aaagaattat aggattgatt tgcaacgctg agtcaaggta
      301 cctgtacaca aatgagagat ttttttcccc cctgtgaaac cttcttgagt ttaaaaactt
      361 gtcgttagca tgtttttccc ctcttgcaga atagttgtag atggaggatc tctgtcattc
      421 agtgtatttt gctgcctagc acc
//
LOCUS       KCKM01001256             719 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19893apa ultra-conserved element locus
            uce-7175, sequence.
ACCESSION   KCKM01001256
VERSION     KCKM01001256.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 719)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 719)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..719
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19893apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>719
                     /note="ultra-conserved element locus uce-7175"
BASE COUNT          161 a          175 c          201 g          182 t
ORIGIN      
        1 aaacttgctg taaatgggaa tttccacttt tgctaaagaa agttcctgcc cattcttgaa
       61 gccttagcca ggagggggac gttttccacg ctggcgggaa gttctcctgg tgacttcggt
      121 gtccctcagg gctcagagag gtgacaaagc ctgggtgccc cttgcaagag ctggcatcgc
      181 ttcgctccgt tcacacctca cccccccgct gccgtttccc cgtgtcagct ccgcatccga
      241 gcgcggaaga aaaaagccat ttaatgcaga caaaggttgt atgaaaatat aattctgctt
      301 ttgttagcag ccatcaaact ctaaaaagcg tcgcttttgt tttcttgtaa cattgtgaaa
      361 acctcgtgtc ggatcgagag ctggggccct ctcgactaat cgcctctcct ttgtgttttt
      421 agattatagg ggcaattagt gttgtcaaaa cctctggcaa ttctctttgc tcttgacagg
      481 gtgtcagtcc gctgggcgag aaatggaagg tgttataact ctccagtaat taggatgcct
      541 ccgatttgaa aatgccagca aacgtgtacg cgaggccgcc ggcggcggtg ggggcgggga
      601 ggccgcccgg atgggggatg cggatgagca attaattagg ggctctcatt ccgagcacgt
      661 tgccagctga tgaattggca gagggaaatt agcaggatgc ttagctccca gcgagcggg
//
LOCUS       KCKM01001257             527 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19909apa ultra-conserved element locus
            uce-4578, sequence.
ACCESSION   KCKM01001257
VERSION     KCKM01001257.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 527)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 527)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19909apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>527
                     /note="ultra-conserved element locus uce-4578"
BASE COUNT          146 a           86 c          100 g          195 t
ORIGIN      
        1 tgctttacga aataaaaagt gcagtcaacc tttttcccca tgccgctgtg ccaagaatgc
       61 ttcaaacgaa tcgtatggcc atgttggtag gcttcctcca tctaaacttt ttaatagaat
      121 tccattgaaa tttgtctctg atacgtgtct tgttcctgcg ctttcctttg cacagtataa
      181 tggattcttt aagctttgaa agtgagttgt tgtggcctaa agtaacaaat cagttttgga
      241 atgcatgctg tctgttgtaa atgatttggg ggtaataaat tttctggtac aaagcaatag
      301 gcagagtttt cataatgttg aacagtttag acttgtcttg aagggaacaa tgtcgctaaa
      361 gcaatgcact ggttccaagt atttgttatt acaaaagaca attttttttt tccttaaggt
      421 agaatcctca tcagatttca tgctttgctg taacttgttt tatttcgtgt gtttgacaaa
      481 taaaaatatt tgagcatagt tgtgtatcta ttacaacttt tcatgta
//
LOCUS       KCKM01001258            1061 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19925apa ultra-conserved element locus
            uce-3111, sequence.
ACCESSION   KCKM01001258
VERSION     KCKM01001258.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1061)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1061)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1061
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19925apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1061
                     /note="ultra-conserved element locus uce-3111"
BASE COUNT          298 a          238 c          220 g          305 t
ORIGIN      
        1 atctctaggt gcaacttcac acccctgagc aattccacaa gcaacagata aggaatgctc
       61 agtagattac aagggtaaca tggattgtca catatacatc taaggaatag ttcactcaac
      121 tttgaagggt acgtcttgct gaaacatcag ccattcaaaa accagcagca ctacacaatt
      181 tctaaacact gagtggacag aatgaaaccc actaactgga atatggccaa agatgttatg
      241 aaaaagacat attgctccag ttgagggcca gaggcttctt aaacatggat ctccacaaga
      301 aggagtcttt tccacagaac caacaggaca tccacagtaa gaaaatgttg tatggtatca
      361 gaccactgtt ctaggaagga gctgtgttgc atctgttgat ttctgtggta ctgtttttcc
      421 tgtgtgtttc tctcctttgg tgtagacact gttatttaaa accaaactct cactcacctt
      481 agatttctcc tgatgcagct caatttgaat gtctgttagc ttggtcctga gttcctcatt
      541 ggcagcctgt agggcaacaa tcagtgcctc aggcttttcg cccttgctac gtcctttttt
      601 tgacatggtt tcttatcagc aagagccacg tgtttaacaa tttcaaatac agactgccat
      661 ctttttctgt tcctttcagt gccagttagt tcagcaccta ctgtgtgaca ttccctaagg
      721 tcctggactc agctgctttg gaagtcctgt gagaaataag acatactatt atttgtcagt
      781 ggacactgca gcatgacagt tcacatggtt acagaacaca agagatagct cacttcacca
      841 aacactacaa tctttgtctg aaaacctgca agggagatcc cagcacaatc aggcctctgt
      901 atgcaagttt ggtgtcctgg tggtgatccc atatatgccc ttttcctgtt ctcagaaagg
      961 ggcaccatgc aatgaagaca gaattggttt accatacgga ttagtgtggt tgagagtaca
     1021 ggactaaaaa gggcgggtca tttaatccaa gctttgtggt c
//
LOCUS       KCKM01001259             939 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19941apa ultra-conserved element locus
            uce-5371, sequence.
ACCESSION   KCKM01001259
VERSION     KCKM01001259.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 939)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 939)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19941apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>939
                     /note="ultra-conserved element locus uce-5371"
BASE COUNT          239 a          188 c          186 g          326 t
ORIGIN      
        1 ctcaaggagc tcctgttact tggagatgca gcgtgttcct gtttcatacc tgtttgtgga
       61 acctggctgc ttgctaaagc catctggtcc cctccggcgt gtggctggag cagggcctcc
      121 cgtgttccgt gtgcatctct caaatggacg taagcgcgtt agaaacccat gcacgtacgt
      181 acagttttcg cattgaattc acgccacgcg cttcctagct tggaaaaggt tagttaaatg
      241 tgcgctgctt gctcagtgcg tgtgtgtcta ttaaaaaaat cgtttcctct ggaaaacagg
      301 ccaaatgcga caactgtttc aaaaaatgta gatggttcag gtgggtactc aaaccctgat
      361 tcagcaaggc aaaggtcctc catgaaaagg tcatttttct gtagcttaaa aacctgctgc
      421 tgttttctag gtgtaaagca ccaagactca cagaattctt tcttggcatt tttgaatgcg
      481 cctacctctg ctctggatca atttgaagta agtgtacagc tattctcact ctcttagtca
      541 gtggaactac tgctgttact tgcaagttat atgtttattt tctgagagtt ttctactgta
      601 ttttaatcat atttccctgt tgaatgtgag aattgtttgt ctatttacag tgctggctgt
      661 cttctcttca gtaatcatag caaattctct ctcagatctt gaatggtctt tctttgtatt
      721 cagaaaaatg ctaagtaatg tgaatagcca tttggtaaag attggagaaa atacattaat
      781 aatccttaaa tgtattccat gaagtgatta gtactgtata tttattaggt tgtttttgtc
      841 ttctgttcat tttatagaga tctgtaaaat ccagatcatt actatttatc tcctctacac
      901 agttcccata tgcttaaaaa taaatctgtt taatgcctt
//
LOCUS       KCKM01001260             971 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19957apa ultra-conserved element locus
            uce-7654, sequence.
ACCESSION   KCKM01001260
VERSION     KCKM01001260.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 971)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 971)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..971
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19957apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>971
                     /note="ultra-conserved element locus uce-7654"
BASE COUNT          288 a          212 c          203 g          268 t
ORIGIN      
        1 cgctacaaag cacagtacac aatcatctag tctctttaac ttcacttaag ttagtttccc
       61 ctgccacccc tccaaataaa atacgctaat accatggaaa agtcagaagc cttatggagt
      121 gctgttaaat atagtctcaa ggtgggcctt tctttgaaaa ggaacaaaat aatgagaagt
      181 atcatgccag ttctagtccc attgagtatt tacaccctgg acagcaaaag tctttgctca
      241 caagaagtag aaaacagata caatacatgg cttgaaaaat gaccagagta tgcacctata
      301 gtactgtaca ctaaataaaa tacacaaggc agcaatactt aggggccaga aacactgctt
      361 actacaagtc agttatggaa tcataattta cagtaaaaat gggcatgtcc caaggctcaa
      421 ttttgttttc ctttgtcatt tacagtagaa taaatatttg tcgctattgc tacactttgt
      481 ttacattcta acctagtaaa tgcagaaagc tagtgtaaag catatagatt acgtgtaggt
      541 cccatacgta tgacagtttg ttcaagacta gtaggttttc ttttttgttc tttttttttt
      601 aaccttttta aatggctagg aggaggaggg gagggggaag agagttgtgc ttacaatcag
      661 ctgcttttta tgtcaaattt aatatcaaag cgtccctgga agcggtcttt gtcgctgtac
      721 aggatgttct gcccgtaggc cttgcattcc acgcgcacct ccaagtcgta ggtcaggttg
      781 gtgaactgca cggccaccag cggctgcagg taccgtggct gcaggagctt cccataatag
      841 gggtagtact gcaggccaaa accagggtag ccgcccatcc catagtactc cactgtgcct
      901 attttgtcag catcctcgtc tctctagagc agggagggag aacaaacaat gacggtcacc
      961 caaacaccac c
//
LOCUS       KCKM01001261             455 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19972apa ultra-conserved element locus
            uce-1081, sequence.
ACCESSION   KCKM01001261
VERSION     KCKM01001261.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 455)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 455)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19972apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>455
                     /note="ultra-conserved element locus uce-1081"
BASE COUNT          129 a           82 c           91 g          153 t
ORIGIN      
        1 ttgcaatctt gaatgaaatt gtccgtcgta aaagatgcct caagaatttt gattttggct
       61 gtctatctgc agcgtactct cgtgtcattt gtcttaattt tatcttgcta tcactaactg
      121 tagacactac ttcaggaata ttttgaattt agttttaatt gtacagcttt cgactcacgc
      181 aacatttctc tttgtgttga aagcatcacg gtgatttatc ctcattattg tgtaaatagg
      241 tttcggcagt tctcagtaaa taaaacaaag agtgacagga ggagaagggg gaatttgctt
      301 tcctaccaat tagagtagcc ttaggcagta cttttaagag gagataaatc ctgcaaatca
      361 ctaaaatgat cctgtcacat gcaccaaata ttaaaatcac acagcggcgc acttcataca
      421 gtttgctttg gtttaatgag ttggggtggg cttcg
//
LOCUS       KCKM01001262             650 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 19987apa ultra-conserved element locus
            uce-2446, sequence.
ACCESSION   KCKM01001262
VERSION     KCKM01001262.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 650)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 650)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..650
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19987apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>650
                     /note="ultra-conserved element locus uce-2446"
BASE COUNT          194 a          117 c          131 g          208 t
ORIGIN      
        1 ttctgacttg tttgagaaca ggaatgcacc aagaggagat gaaggatgtg aagaagtagc
       61 accattgaga ttaaagggac caaattttac cagcaatcac agcaaatatc tgacttgctt
      121 aagtgaagcc aattactgta ttattgcctc cttttgcact atgcacagta gggatgtcac
      181 tggataatgg tttgcatgta gagttaatca ctttgatgca tttctgactg atcccagcaa
      241 attatgtttt ggttccacta tattaaacac aagagcaggg gattatcatt aataaatctg
      301 aggcacagca tgcataaatc ttgaataaat caaatatcaa ttacataggc agtatctgct
      361 gacatctgct ttcatcaaat aatatatttg aaatagattt tattccactt tgttggagtc
      421 aaaggagcgt tagactgatg tgcgaagacc cttactccaa agagttgggt tatgtaggcg
      481 tgctggtgcg tgctgagcac cataaaacag cctttctttt tttttttcca ttgcctttca
      541 tttttataca taaataacac attggttcca tagagtagtt cccatggtaa agagaggact
      601 cgtatctttt gggagaagct cttctgcgcg cccgttgcta aattctattt
//
LOCUS       KCKM01001263             972 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20003apa ultra-conserved element locus
            uce-417, sequence.
ACCESSION   KCKM01001263
VERSION     KCKM01001263.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 972)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 972)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..972
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20003apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>972
                     /note="ultra-conserved element locus uce-417"
BASE COUNT          262 a          249 c          200 g          261 t
ORIGIN      
        1 atgttcatta atttgttacc gattccagct cgctctcctt aaacgctcaa gagtgtcttg
       61 gcagcgcagg cgcaatgccg tgcctacgga ggagcccggg ctgccccgag acgccttgtg
      121 cctacgaccg atcggttgct tttacaagtt taatctcggt attaaggagc tgctcgcgga
      181 accatgtcgc tctaacatct ttgacccagc tgtacatcac atcaaccgct ctaggagggg
      241 gcaggctccc aggattccga gcagcggcgc atacctttaa ctccctaatc tgtaatacta
      301 caaaataccg ctctcatttc ttcccgagca caagtggact accagcaagg gtccaacagt
      361 gttattccta attacctttt tttcactctt gatcctgtgg cgctcataat tagttacctg
      421 gggctgcaat ccaatttgaa gtgatgacaa gaaagtgatc catgaaaaag taataagtta
      481 aatccaattt cagccttcct ctaattaaat gcacatggaa ctaatgactc aaaccctacc
      541 atttcagtga taatggtaat tagcgaggtg ggagtcactc tcttttttca acactgtagg
      601 tgtaaaccac aaggtaaaat ggcaggagca ctcttaatta catgtgtcat tttgtcagca
      661 atttacacat ttcggaccag ttaggaaggt ttcatttgtt ttccccttcc ccgaggtggg
      721 taacacacgg ccagacttgg gcacagccag ctccacagcc ccgctcccaa cctggtcaga
      781 aatcacaatc ttttttaaaa aaaaccaacc caattattct ctaagtgctt aatatcaaag
      841 caggaaaccc gctagaaaat tacacttggg gtgttctaac gagacacagg gctggaaatg
      901 agggctcctg gccttgactt tcagttttgc cctttaggag cgacttcttt agaacctgca
      961 gatgccaaac ac
//
LOCUS       KCKM01001264            1022 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20019apa ultra-conserved element locus
            uce-351, sequence.
ACCESSION   KCKM01001264
VERSION     KCKM01001264.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1022)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1022)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1022
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20019apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1022
                     /note="ultra-conserved element locus uce-351"
BASE COUNT          327 a          201 c          186 g          308 t
ORIGIN      
        1 cttttaaatg aagaattgca tttgtactgc aattatgcaa atactgaagt aataatttag
       61 cgaccttctt gctggcttta gcagaaataa gcacagcaca cctaagagaa tgaaacgcac
      121 ggcaagagaa cttcagcaaa tgtactagcg ttcaaaggag ataaagaaca cctcgtattt
      181 acattttaac acagctgcag tacagcatta aggttaccgg gatggccttg tgaacttaca
      241 tctcgctgtt cttgtgttat aaggggaaaa agggctgatg tgagaacaaa gtactgtcag
      301 caatctaccc tttaaactgc ttagacctgg aaggcacgct cattgcttta tttctttgct
      361 catttttctc caagattggt acatctgaac tacctttcta cagatctata cagcaccact
      421 gctcagcaag aaaaagagag ttatattttc cccttgagtt aggacgcctc atgacaaatg
      481 ataatggata atcaataaac tgggaaatat gaggccacaa actttatgaa gccaagagac
      541 atattacttc tgaacaacac tcatttccct taacaaagtc actactagac tgtgcctaat
      601 aatctgaaag aaaatcaaag gacctgcaac cacatcagca atattggcaa cttattccac
      661 tttaatggca ttttgattga tttttctgcc taatggtagt tttatactgt agatttgacg
      721 ctgcttctgc aaaatagttg tgtgtaataa acatccccga aggcaaacag tgaacattaa
      781 ggttcttgtc ttactaggag tcataattga agcttgacca acattgcctt tggccttttt
      841 aaagaaatct tttgcaaaag ctattccttt ctgtttttcc tttctgtgaa ggacttgata
      901 tgtgatcaag gcattttgtt taaaaaattc ataaataggc tgaccttgac aatgactttg
      961 tgtgtttcag taaagcattg acctgctgga aatggagacc cctgcactaa taaatcaagc
     1021 ac
//
LOCUS       KCKM01001265             855 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20034apa ultra-conserved element locus
            uce-3957, sequence.
ACCESSION   KCKM01001265
VERSION     KCKM01001265.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 855)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 855)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..855
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20034apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>855
                     /note="ultra-conserved element locus uce-3957"
BASE COUNT          287 a          119 c          144 g          305 t
ORIGIN      
        1 tttgggttac ataaagtaaa taaaatgttt atttcacaag tgatttgtat cacataaatt
       61 aaaaaggtgt ttgaatacat gaactcataa gtctttgaat tttatgacct ctgagtcatc
      121 ctaaatatag tttgatttcc ataggataca tggagctgtt gtaaaatgca ggttgctttc
      181 atgatgagaa aggaatcata gaaatgtgtg aggacttaat ttgaatacaa tttaaaatgt
      241 aacgttgcca attgccatat atttgtttgt catttctgct tttgacttat actaaacagc
      301 actttgatta ttacacaagt aaaatattca atgttatgtt atggctactg caagcattga
      361 ttaaactctc cagcgttcat gaaggctgac agggattcaa aggaggaaat gtaaaacttg
      421 aaggtacagc agtatagtga catttcactc tataaagctg ccaatatttt aatcctgcac
      481 gtaaatcatt ttcatcagtc caattccata tcttaatttg tgtagcaaac aaagtattgg
      541 attgtattat gtttaataat taagaatgtg ataacaattt ccatatattt taagttcctg
      601 aacaagaaat agagttaaca tttttaacct caattttttt gctttacaaa ataggaatgg
      661 ttaaggataa ggtctaattt tcatgctgtg atcaaccaaa gtttcattat ttgcttttat
      721 agaaccctta gtttctctcc ttaagtgatg acttcgtcaa tgatcatgtt gtattcattt
      781 agagtgatga ttgatatggt aatagataca gtgtgattga aagcaacctt tgtcaatagg
      841 aaggccaaat actca
//
LOCUS       KCKM01001266             482 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20048apa ultra-conserved element locus
            uce-3214, sequence.
ACCESSION   KCKM01001266
VERSION     KCKM01001266.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 482)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 482)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20048apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>482
                     /note="ultra-conserved element locus uce-3214"
BASE COUNT          132 a           86 c           89 g          175 t
ORIGIN      
        1 tctgtcaaac aggaaccttc tatattactt ttcattatta ttttttcttg cttctcctaa
       61 gcttggagct atttatggaa attacagtat tcatgtatgg tagcttcagt caaagatatc
      121 aggactggta tgagaggaaa atttcgactg aaagcttgtt attcacatca ttctcttctc
      181 agcttggcaa agttgaaggt taacgtcatc tgttctacac atttcaaatt agtcacagaa
      241 cttttcttgg tggttcagag cctggtcatc cagtcagagg aacagtaatc catatggaaa
      301 aattagctca atgctactag actggtggtt aatacttgag ccttagttag gaatgttcgc
      361 agcatcttgg gactcttttc ttccttgatc aatttcttaa aataggattc ttcatcagag
      421 gctgaaaaga ggaggactgt actgaagtat attttttttc catcaccaag tctttttttt
      481 tt
//
LOCUS       KCKM01001267             223 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20063apa ultra-conserved element locus
            uce-1233, sequence.
ACCESSION   KCKM01001267
VERSION     KCKM01001267.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 223)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 223)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20063apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>223
                     /note="ultra-conserved element locus uce-1233"
BASE COUNT           90 a           38 c           31 g           64 t
ORIGIN      
        1 aaataaaaga tcaaattaag tgcctctgtt ttgaacagag cacataagca ataataaata
       61 gtgactccca tagtaaaaga taaaatttca agttacgaca aacagctttc attacaggaa
      121 tagaaaaggc caataacaaa atattctgca ttgccattta caaaaaagta ttgactcaag
      181 cgggctttct ctttaatatg ctttgcatat gaaattcttt cca
//
LOCUS       KCKM01001268             739 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20078apa ultra-conserved element locus
            uce-7476, sequence.
ACCESSION   KCKM01001268
VERSION     KCKM01001268.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 739)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 739)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..739
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20078apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>739
                     /note="ultra-conserved element locus uce-7476"
BASE COUNT          238 a          152 c          114 g          235 t
ORIGIN      
        1 atcttcaaac aaaggttatg attttatcta agccttccct gcctcttgta aaaacctcat
       61 tccaacccat ctgactttta acagacaaaa ttttacttgt gttccatcct tacctcaagt
      121 tttgtggtgc ttcaccaaac aaactgcaaa tttctctaat ttgttttagt gcaggaatga
      181 cccatttgtc atttgtgcga agctcttcta taaaacaatc tatccactgg atcttttgcg
      241 tatctcgatc cttaaagaac aagtatttat aatcaaaatc aagtatggtg cagaaactac
      301 caccattccc ttactttcta aggtagaaca gggcatacaa agccacacaa atactagaca
      361 aactgatttc tccaagtatt tgagcagcac tacatgttgg cagacgcaat cagtgtgtta
      421 caaactctct gccttcaagc acttaagcat tcagtacata tttaagaaaa cctagatgca
      481 gctagagagg atcatcagtg tttaactaat ttgcacttcc catttttcat ttatttctac
      541 tcactggtac tcagagtaaa ctgctataaa aatgataaaa tgttccttag aaactaaaaa
      601 aacaacacca gtggctgtca agacagataa atggattaat tttgaaccat aatgaattat
      661 tattttggca gacttccaca gaagttgcgg tggggaaaga gagtatgtaa tagttttcat
      721 tgtcctttgc taggttctt
//
LOCUS       KCKM01001269             587 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20093apa ultra-conserved element locus
            uce-1492, sequence.
ACCESSION   KCKM01001269
VERSION     KCKM01001269.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 587)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 587)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..587
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20093apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>587
                     /note="ultra-conserved element locus uce-1492"
BASE COUNT          136 a          134 c          140 g          177 t
ORIGIN      
        1 ctgtcatttc tcaaccaaga tctgtaataa aaaattttaa catactcaat tcgcggccat
       61 gttgaatccc atgatagtta atttttcctg acagactcgg tgctggtaat gaacaggtac
      121 ttgtcagact tgccacagtt gttttgggtt ctctgtcagt ttcagcagct gggggtcagg
      181 ggtcaccggg ggggtgtatt cagcggagac cgcgagacag acggctgtca tgtccttttc
      241 ctgcagattc aaaatggtga acagaaagcc tacgtcttga aaaacaagca gctgacaggg
      301 ccaacaaagg gggtcatcta tcttgaaata gatgtgattt ttaatgctgt aagtcttaac
      361 tttggctttt ttgtactgct aaagagttca gtttcatgaa agcttttgtt cctgatttgt
      421 agagaatttc tgtcattcct cattttctct aaaccttgat gtgtactaca gaatgctcct
      481 ctgccactgc ctggcacacc cactcttttt gttactgctg ccgttgccgc taacgcgcgg
      541 agcagcaact cgcgccggcg cgccgtgatg tgccgccggt ttggcag
//
LOCUS       KCKM01001270            1018 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20109apa ultra-conserved element locus
            uce-2462, sequence.
ACCESSION   KCKM01001270
VERSION     KCKM01001270.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1018)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1018)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1018
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20109apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1018
                     /note="ultra-conserved element locus uce-2462"
BASE COUNT          276 a          169 c          224 g          349 t
ORIGIN      
        1 tatagtggag aggatgcacc tgcgagagat gtgcagacat atatattttt attctgggtt
       61 cgaaacattt attttacttt ttttccctag gaagtcttag cttcacgttc cttgggttat
      121 catgttgtgc tgttaaggta gagcaaacag ttacgtgctt ctttttgtca aaactgcact
      181 ggaaaatgat ctaaggcgcg tcttctgtat ctctataacc aaaagcctga ttctgtattt
      241 taaaggaaaa tgacataaag gggacgagtg tgaagtctgg caagtcagta gctatgtaaa
      301 ttatgcttat tttaagagat tcagtttaat ggtagagaaa cgtctcatgt aattaattta
      361 taagcattat tttttgttac atttttatgt tttgttatcg tttttgtagg ctttaagaca
      421 acagcagaaa agaagaaatg gagtctcaat gatggtaaac aaaactgttc ctcgtgttgt
      481 tttgacacca ttaaaggtgt ctgacgagca gtcggattca ccttcaggta aatagctaaa
      541 ggaccgtttg cttgagcagc tgtagtcaca gagccttgct cttcatcatc tgtgtagcat
      601 acaggattta ggactgctga aataatattt ccacttggtg gcttttttta acgtctttat
      661 tcctttatca tatctgatgt ctcaaggata gagatttttc ttaaataaag aaccaaaggc
      721 ggacagtaaa atgacaattg gtaacagcag cagctttaat ggaatgcaaa gtaacgtttt
      781 gtttggctct ggaactctgc tggaagacca catgctggga ttcagtgcca tgaaaagggg
      841 agggggaagg aatggcaagc ttctctgtga atgtgaattt gtgtctcttc tgcagcgcag
      901 gactcgaatc cttttgttag cttttcttct tctggtatcg tgcttatcgc tgcagcacta
      961 ccttgacctt tcgttctggt gattaagttg cttcatttta agagatttct acgtctat
//
LOCUS       KCKM01001271             905 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20124apa ultra-conserved element locus
            uce-908, sequence.
ACCESSION   KCKM01001271
VERSION     KCKM01001271.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 905)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 905)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..905
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20124apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>905
                     /note="ultra-conserved element locus uce-908"
BASE COUNT          303 a          158 c          145 g          299 t
ORIGIN      
        1 ttgttactaa attcagctga ttttccactc ctactgacat gctataaagt atctataact
       61 attaagcaac tcacgttgaa acatttgaca actattacta ctgcttattt tttatatatt
      121 ttaacagtat actttttcca cttcatctga atctatttta aaaaaagaca cacagaagct
      181 tattttattc cttattagct attctacgat atgcatcatc attatactat tatacaccag
      241 ttatttttag taaatcctga ttactgcttc ctgaagaaga aaaaaggagg acgacagcga
      301 ttaagttatt tgtttagttt tttagattca gctgtaattg ctggtacaca tctccctgac
      361 tgcacacatg aagcaggttg aatagaacac tgaaattacc tccttcataa tagtttgttt
      421 tgataatgta ttgtgtgtcg agatgatgag aaacagttgc tgtcaatttg attagccatt
      481 atatttttat gttaattgcc attattgggt ccattctgtt tagtgtcacc atagaagcca
      541 tacaatgtta gcataaataa caaattggag taaattagga agatatattt ttgccaattc
      601 attttaattg cccctcagtc cttccgtcgg ttaacgcagc tgttgaccca taataagcac
      661 taggtcaata tagctgcttg tcaattcaga aatgcaaagt gctgtgttgc tggtaatgga
      721 tatacaacaa cctttgccag ccaactgaag caaacgaatg acaacccgca cgaaagaata
      781 aagcatcagc tatagagttt agtgacctga tattagtagg caggctaatt gaaagtcact
      841 gcttaaacgg ataaagaaaa tacaaaaatc agtatataaa aacatatata tgcacatata
      901 gaagg
//
LOCUS       KCKM01001272            1154 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20140apa ultra-conserved element locus
            uce-7963, sequence.
ACCESSION   KCKM01001272
VERSION     KCKM01001272.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1154)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1154)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1154
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20140apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1154
                     /note="ultra-conserved element locus uce-7963"
BASE COUNT          211 a          364 c          300 g          279 t
ORIGIN      
        1 ctttcaggag gattcaagct tgagcagctc catgggaagc atttgggttg ctgctctttg
       61 aagagcgggt tggagcagta gcaccccgca ggaggagaag ccagatggtg ccaggcctcc
      121 tccccaaaag tggagggaaa gacagtgggg acagagagga caggcaggct cccagctcag
      181 ccaccagccc cgcatccccc tctgcctccc tgcactgggt caccggcttc atggcggtgg
      241 ccagtgagtg ggagagttgc tttggacgac tctttttctg acacactttg tttctctccc
      301 actctctccc accccaacac gtttatccct ctttgaatta cttccccccc ctgcacactg
      361 ccttccgtct ttcccctttg ttcccaccca caaaatgtgc ttgtgtccct cgtcccctca
      421 tctgggtgtc gtttccacgc ccctttttcc tctctctcac tcctgcactg ttttttctgc
      481 ccctctccct ctctcctttg caggggccgt tagagcctct agtattttcc cgatcctgag
      541 cgtgattctg cttttcatgg gtggactctg cattgcagcc agcgagttct acaaaacccg
      601 acacaacatc atccttagtg ctggcatctt cttcgtgtct gcaggtaaag ggatacgtag
      661 gaccctgatg ccccagagat gggctccagg ggtaggggga ctgcccagct gggagatcct
      721 gcaggggcat ggttgcctag gcagaagtcc gcgagtttcc cagccctgat aagctttatt
      781 caaggtgaaa gcaccctccc aaggatgcct cttcaccttg cctgctcacc aggcagcagc
      841 accctgaggg ctttcctgct gttccggaga tgctggaggg agagggtttc cctacatctg
      901 tcagggatca gctgggagtg cagtccaggg atgtggcagg caacacgagg agggtccaca
      961 cgggtttccc aaggaaagct gcccactggg agggggtgag tggctggggg cctttcccat
     1021 ccccacctcc caggaccaga ggttcaactc cacgtgcccc accatcaccc agtgtgaccc
     1081 tcctgacatc tccctctctt tctcccgccg gccggctggc aggtctgagt aatataattg
     1141 gcatcatcgt atac
//
LOCUS       KCKM01001273            1106 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20156apa ultra-conserved element locus
            uce-2273, sequence.
ACCESSION   KCKM01001273
VERSION     KCKM01001273.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1106)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1106)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1106
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20156apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1106
                     /note="ultra-conserved element locus uce-2273"
BASE COUNT          319 a          229 c          265 g          293 t
ORIGIN      
        1 agcctttact ctccctgtac ttgcagcccc cttttgtaaa ataaaagtcc tcaagggccc
       61 tgttgtgaaa tttaattcat ttttgtgcaa catgctgaga ttccaggtga gaagtgcagc
      121 agccagtaac gctgtttaca cctccaacta cgccaaagag caggagaggc caaacctgaa
      181 tatggacgtt gatgtaattc ttcacacaca acctgtgcaa aggaaaagca cactttgtgt
      241 acacaagcat gcaatttatg ggggtggaat ctaaaatcag ctgctacaaa acccttctct
      301 ggacaccaca gcgattgcca cagcgtaatg gcagatgatg tgcatcagaa ggatttatcc
      361 agataaggca aaaatctgca gacgttttaa tcagtaccaa gatagatctt gtttatatca
      421 agaatctttt taacgcagca ttgctggttt ggtccgacat catctcctgc agtgtgtgga
      481 gacaggccag gagtatgaag gctacagagc agagcaggaa gaaagtcaac tgtgaaattg
      541 gtaattttat gagtttcacg gggggttttg ttgttagaca caatgcattt ggaacagagt
      601 gcccggggta ataccatcca catagtgtcc atttgtcagc tataggtaac gatatcttta
      661 acctagagtt gcgcagatat gtacaaaggg attctgaaag tagggtttaa ctggttaagg
      721 gtgaagaaat agccatcacg aacgggtcat gcaatactac tgctgcttta tttgtgggta
      781 tggggagccc gtcaagaact cagtcacggt ttgccctcag agagaggtgg gaaaagttac
      841 ctcaattttc agcagcccag cagagtccct tcctcctcaa aagaagggca gggaggagtc
      901 cctagctggt gttcctgaca gtgcacatat tcagtagggt tgcgtcaaaa gggagcagtt
      961 gggtaggaaa gcaaaaacat cacaaggctg aatggcaggc aacatttgtt tcttttttct
     1021 cccagaaaaa ttaccaagtt gtgctggccc tgtttcccag ttggatacat ctattccctc
     1081 aaaaggttat cagctttatg cttgtt
//
LOCUS       KCKM01001274            1032 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20172apa ultra-conserved element locus
            uce-5498, sequence.
ACCESSION   KCKM01001274
VERSION     KCKM01001274.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1032)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1032)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20172apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1032
                     /note="ultra-conserved element locus uce-5498"
BASE COUNT          269 a          253 c          265 g          245 t
ORIGIN      
        1 gctggaagtg gaggcaggca cccaccaaaa aggaaacatc tgtactaatg gccatgggag
       61 gggactctcc ctttctgcct ttgcacttgg gacctcggcc tgctcccgca gccctgggga
      121 gaagcgtgtt tcaaacctgt gtgagtccta aagtggtcct tcatggcgga ggccgtgagg
      181 aaagaatagt ggcaggtggg ccaggtgcac ttgaagggct tctctcccgt gtgcaacttc
      241 atgtggttgt tcagcgccca cttctccgtg aagctcctgt cacacaggcg acatgtaaat
      301 ttcctgggta ggcaagagag gaggaattaa aagcccgcac gtgcacaacg caagcgaagg
      361 agcgcgtttt taacccgaag cctggtaaat gcatagacct tcgtgaagag aattgcagac
      421 cgggtctgtc atgtctgtat aaccaggcat tgatttttct gtcgaggcct ggcacttcag
      481 ccatttattc tctgctttgc ggttgggccc aacgggtttg aaaaattctg ttacagtcca
      541 gtcacccctg aggcaaatgt gagaatagat ttcacctgtg caggcccaca ccacttatcc
      601 agggcacggg ctgtcagagc aaaggctaaa tgaaaagcta tccatactaa actactcaga
      661 caatcacact gctcggtgcc atgctgctgc cgccgcctcg ccggcttgaa atactacttg
      721 taataacgcc gccgcgataa taaacaaaaa ctgcttcgaa acgaaaatgc agtttttaag
      781 aggggctgca gaaattgaag taagtgtttt ctgataatgc cttctcctcc tcagcgttac
      841 cacaggaaac ataaaaagat cccagttgtg gcaagggagg gaaaaaaggc aattcgttct
      901 gctgagcaga gccaccgcac ctcttcgtgc tgcgagataa cttcgcagaa gcaggcaaag
      961 ctagcctaaa tctaaggaaa ccttgtttca cgtttaggtt ttcatgctgt gatttttgtt
     1021 aaagcagatg cc
//
LOCUS       KCKM01001275             362 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20187apa ultra-conserved element locus
            uce-6515, sequence.
ACCESSION   KCKM01001275
VERSION     KCKM01001275.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 362)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 362)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20187apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>362
                     /note="ultra-conserved element locus uce-6515"
BASE COUNT          116 a           57 c           68 g          121 t
ORIGIN      
        1 cacaggcaga tagctttgcg ttggagtgct ttaatatgtt tttatattgc atatataaag
       61 catgcaaaca taaaccagtt tgttgaaaac tacccttttt gtggaagctg gccgtaattc
      121 tgaacaagtt ttcaattttc gcactgctgc tagggtaaaa cattttaaag agttttaatt
      181 tttacagtgg cttcaatgac acgagattat ctaacaaagt aatggttaat caatagaggg
      241 tttagttgtc aggtgaaaca tataacacac taaaagggat tgattgcaag gttcctcctt
      301 atttactggg aggtatatat ttaaaatgac acaaacttgt taccaagctg cattccttta
      361 ac
//
LOCUS       KCKM01001276            1012 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20203apa ultra-conserved element locus
            uce-5919, sequence.
ACCESSION   KCKM01001276
VERSION     KCKM01001276.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1012)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1012)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20203apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1012
                     /note="ultra-conserved element locus uce-5919"
BASE COUNT          273 a          188 c          209 g          342 t
ORIGIN      
        1 ggtttgtgtg cctttaagtt tataatatta acatttgagg cagaattgtt ttcagatttt
       61 gctctttatc atcttggtga gacattttct taaaggcaaa cagatcaaaa ttttaaggaa
      121 attttgccta gtgtttgcca ctttcccata ggtgtaagtg tcctcacggg agtggtttcc
      181 ccctccctga gagcgcgtgg gaaagtagat gaatgtttct tggagatgtg ctgccactgc
      241 agctagttgg gaacttcccc aaaaggcacg ctgtgaagtc cggtatacca agggttcaaa
      301 taattatgat ttaatttgaa agtgagctcc tctaagaggt gccaaatagg gcactggtac
      361 tagtttttta ttccaaattt ttcttgttca tcctttgata gaatttcact aaataataaa
      421 ctcttctctc tgttatttgt gtgtgtgatt tttgtagtgg agaaggcaaa tgcaaagccc
      481 ttccagatga ctgaaaaaca gtgggtcctc tgcagctaca ggggattcta gacattaact
      541 aaaggccagc gagcactcaa gtccccaagt gttttcctgg tgtaaccact tgttaactac
      601 attttctctt cttcttttta tttttacatt ttagggtgtt acagtaattt gaaaggcaat
      661 gagcagggtt tttggaactt accttaaaaa caaagtgctg agaagacacc tcttacagaa
      721 gtcttattaa actcttctag acttgcttta gaagtaacca atttccattg tactgtttct
      781 tgatttactt ctgaaataat ggattttccc agattgcttg aattaaatat aatctctgca
      841 gatttaagtg gtgctacagt aagaacttta ctatgcgacc tgggttcaga cctatgtaat
      901 caagatgttg tcatgctgtg ggctgtctct tgaggcctgg ggagctgcct tacctttgta
      961 aagatacgaa accttaaaac ttctgcaacg taggaatctg cagcacgacc tt
//
LOCUS       KCKM01001277             899 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20219apa ultra-conserved element locus
            uce-548, sequence.
ACCESSION   KCKM01001277
VERSION     KCKM01001277.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 899)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 899)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..899
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20219apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>899
                     /note="ultra-conserved element locus uce-548"
BASE COUNT          273 a          183 c          173 g          270 t
ORIGIN      
        1 ccacacccag gtttcgctgc cacgaccctg tgcatcgagc gaggctggac aggaggaggc
       61 tgcatcaaag cctccccgag caaagcaggg ttctgaggag ctcccatctc tccggtccct
      121 gcccagcgag tggggctaac tttcccttcc tgaacttcct aatcccgctt tttgcttgcc
      181 cctcgagcgt ttggcagagt cagtactagc ctgtggctca gacatctacc agagagcaac
      241 tatataaatt gtgatgctaa aatatggaaa acatgttgtg gtgtttgtct ttgcagtgaa
      301 ctgaggagaa gggaaggcag gaggcttggg aataactttt cacagcttca gcttttgttt
      361 acctctaatt gtcaagctgt tatttctgga aaagatgcaa gatgccacct tcaaccaata
      421 tttcttttgg gcatttatta attataacca caaaagcatg catcaatcta tcacaaactt
      481 ctattgttct ttctttaagc ctaccttaac tccattattg aaactttaat taaagcagaa
      541 atgaaacaaa aatgttatgc ttcttgcatt ttaaaaaagc atacttgtat aacggttaca
      601 tgtctaaatt agctaaatta acaccatatg gtaggcaaag tatataaagc cttttaaagc
      661 tgacagctaa agtgattaaa gaaagtctac agtcttccac ttacagctta aatcacatct
      721 gtgcactttc tatgttaatt gcagtacatg cagaagtgga taataaagaa attccacttt
      781 attggttgta atttatattt attacctgat atgagaaaaa gtcagctttt gtatattagt
      841 gctgtaacaa tatgtctgct cagaaatggc atttaggcaa taagcataat agcaaggaa
//
LOCUS       KCKM01001278             747 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20235apa ultra-conserved element locus
            uce-6604, sequence.
ACCESSION   KCKM01001278
VERSION     KCKM01001278.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 747)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 747)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..747
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20235apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>747
                     /note="ultra-conserved element locus uce-6604"
BASE COUNT          231 a          134 c          140 g          242 t
ORIGIN      
        1 aaataaaagc acgccctttc ccctcttctt ttcctccccc caaaaagcaa tatactttta
       61 aaagggtaat acaatcacga ccattatgtc aatgaaaatt acatgctggg tttatctctg
      121 taggtatctg tcaaatacaa agcgcacgca acatctttgg agtaataatg atgttttatc
      181 attttaatta caaacactct gaaaaaaatc cctaaagtgt accaattggg gtggtctgaa
      241 ttaacagtag cttgatagcc caagggtagc aaaaatagat tgagctacca aatttcatag
      301 tagttatagc agctgtcttc ttgcctcagg gaaactgggt atttaacaaa gcagacagct
      361 tggcattggc atctgattag taatgtgggt attcttggac agaatctgtg cagttctatt
      421 gttttactgt ttgattagga atttcaagag ctatggcatc atttagcttt tatagttagc
      481 ttctgtatgt tcacttacag gtatttttaa agggtatttt ctcacttatc actcgctgca
      541 agcagggaat attgtcttga acatgatcga tgaaacatga caggatttaa atgtcagggt
      601 cagttgcctc cccatttctg tgccaaaatt ttgttgaacc aactgggtaa gtttttctaa
      661 ttgggcagaa aagtgaataa ggtaaaagtc tgttcttccc ttaccacagg atacaaatta
      721 tgtggcattt aaaataattc tgaaaca
//
LOCUS       KCKM01001279             554 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20251apa ultra-conserved element locus
            uce-3761, sequence.
ACCESSION   KCKM01001279
VERSION     KCKM01001279.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 554)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 554)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20251apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>554
                     /note="ultra-conserved element locus uce-3761"
BASE COUNT          169 a          107 c          107 g          171 t
ORIGIN      
        1 aactcagcat taaaccaccc agcagttcca gcaagggtta agacaagcct gtggcactgg
       61 gagacacgac aggactctcc ttctgtgcta catatgtaga tgggtattaa ggacacgcat
      121 ctctcctcat ctaaaaacat gaatttttat gaagtaagcc ctgctttccc ataattcagt
      181 agggtgcact ttgcagaccc taaagtgctg tcactacaga aggtttcatt gcttgcacct
      241 gctaaaacat ttgaggtatt tgagaggcag tgaaacacat ttgcttttca ttttatctga
      301 ctttgaaaat ctttgaagtg tttaatagta gtccagaaaa gatttctgcc tcttaatcat
      361 ttacttgtag ggcacattct ccactggtag cctgtcaggc agaaaacgag tttagcccag
      421 ttttattaag tgccacatgc cgagtcagtg ttcattaaag gtgttttaag gtttgaatta
      481 tgtaatttat gagaaaaaga aatacaaaat tccattgttt tattaatata cagcacagga
      541 tatactgcta ataa
//
LOCUS       KCKM01001280             922 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20266apa ultra-conserved element locus
            uce-372, sequence.
ACCESSION   KCKM01001280
VERSION     KCKM01001280.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 922)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 922)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..922
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20266apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>922
                     /note="ultra-conserved element locus uce-372"
BASE COUNT          294 a          179 c          141 g          308 t
ORIGIN      
        1 ttttattaaa ctggatgtta caggaccaca acttaaaaac tacatttatt ttcagttttg
       61 gctattgtga cttactttac ttaatttgcc actgtattta gctataggtc actcacctgg
      121 aagacacaac tgcagttttt ccacaactgt tgtaatattc cgttgttgaa ctcgacatcg
      181 gatgatttcc tctgtttggg ctatcacctt aaagattaaa aaaaagaaaa aaaaaagaaa
      241 atcacaatta aattatgcaa ataaatttaa tttgtttcaa atattcataa tgtccataat
      301 aggaagcacc attttctcac ctctttccca gcatcctgaa gccttcggtt ggtatcagta
      361 acttggacct taaaaataat ttcacctttg ttagacaaat atgcatatat tgccctgatg
      421 tgactgctca cccttgtaat cagatcatgc ttcatgagaa acttagaaca aagaaatgca
      481 aattcaaatt aactctacag cttgaacttg aacttttgat cgcaaagggt ttttgttaac
      541 ttcaattact tatgacagtt ctttctaaca gattctgtgg caaacttatc aaatttactt
      601 gggatttttg aactttcctt gtttctgtag gtctgtcaaa caattcaaat cattgaccca
      661 attgaccact ggtccctttt tgataacctc aatgagctct atgggccatt cattgtctgt
      721 aagaaatggt gattgcattt tatggtaatt aaacattcat actttgctga atgcaaacac
      781 tgggtggttg attaacatca aacgtggaaa tctccaaacc acagcaacat tttaatgctg
      841 caggtgcagg caaagctcaa cctcagattt tcccacatag taagtgactc attaggtcat
      901 cataataagg aagcacattc ta
//
LOCUS       KCKM01001281             507 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20282apa ultra-conserved element locus
            uce-2674, sequence.
ACCESSION   KCKM01001281
VERSION     KCKM01001281.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 507)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 507)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20282apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>507
                     /note="ultra-conserved element locus uce-2674"
BASE COUNT          142 a          104 c           75 g          186 t
ORIGIN      
        1 atctggagtg tgcattttta catttacttg atccttatct atccccaaat aaaaatatct
       61 tacctatgct acatgattac aaagctttct ctcagctttt gtaattcatt tgtgccttct
      121 agcagtcatg agtcatgggt cttttacact tgtcaagtac acctaatccc tacccttcat
      181 ggcccagaaa tcctaaagat ggctgaacat gtaattgcct tgaagtgtaa aatatttccc
      241 acattattta ttataacata gcctgctagc acctctatag ttaaggttgt gtcagcattt
      301 tcattataag cccctatttt cagctgtaaa aatgtgcttc aggctggaac taggaatgct
      361 agatttttgt tttactattt ttttacaaat aaaattactt tggacattct ttaagttctt
      421 ccatctgtag ttgtaaacac atgcacacac ccactgtcta tttacagctg tatgtgcaca
      481 tgtgttaagg aatatctagc atgctat
//
LOCUS       KCKM01001282             946 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20297apa ultra-conserved element locus
            uce-7028, sequence.
ACCESSION   KCKM01001282
VERSION     KCKM01001282.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 946)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 946)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..946
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20297apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>946
                     /note="ultra-conserved element locus uce-7028"
BASE COUNT          313 a          174 c          174 g          285 t
ORIGIN      
        1 ttcagaaaca tgtacaacag ttaacagtaa tgacaaatag atacagaaaa taagcaacaa
       61 tctttgctgc actgaacttt gcaatttaac acttatttta tatttaatta attcagaaag
      121 tgaagaactt caaaactagc tttgaacagg ctgtttgtta aaaaaaatag aacatttatg
      181 ttttcactgt tgttttttca aatgtgatgt gacaaagtga aaaagctgca tgaaagtgtg
      241 gttctttgtg tgatggaagt gggatgcacc tactagtctc acatcatcaa agaaacagac
      301 atatatctat aatttatgct ttgctttaag cttccgctga tccgatgtgg ctttttcaga
      361 caacacaggc agccctggca cagcctgtca atcatctggg catgctcaaa ttgtagacca
      421 ttagtaggag agacagcaaa gtttctttaa tgacgctttt atatgtggtg tgttggcagt
      481 gaaacagaga agaattgact tgatcaatgc attagtctaa tcatggggtt cctgctctta
      541 atttcttttg tcggtaattt ccatactcaa gcagcattca ggatacttgt aaagacacac
      601 ttagagcact gcatgatgta tgcagtcacc tataaagcat gtcttggata cagctctgta
      661 ggaaacaagg aagaaggata gggggccagt cagattttcc tttgagctag ttttcatgtt
      721 gcgagaatta cagtacctta gtcaaaaaga ggacatttcc atcttttata tattatatcc
      781 cttccaaaca agcccatatc ttccaaagcc agaaaaaagt gcaccagatg acagcatgct
      841 tgattctcgc acactgcaaa atactgcttc tcaaactgaa acaaaaaagt atttctattg
      901 acctattctt aatatgcaga aacagtgtct aacaaacaag ttacac
//
LOCUS       KCKM01001283             701 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20313apa ultra-conserved element locus
            uce-4519, sequence.
ACCESSION   KCKM01001283
VERSION     KCKM01001283.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 701)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 701)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..701
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20313apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>701
                     /note="ultra-conserved element locus uce-4519"
BASE COUNT          217 a          130 c          135 g          219 t
ORIGIN      
        1 caactatgat aaaattgaat taaatgaacc tgcctctaag aaaagagact gaatagctga
       61 gtagtgcatt attcaatgaa tggaaaatgg ggaggctggc tgaaatgact gggaaatggt
      121 tttaacattc tatcaggcta aagagcaatt ctgtgaaatc acagtatttg ttccccccac
      181 taccaccacc acctccccac ccccaatttt taaatagcag tgctcttcct gctgtcagaa
      241 ttcagtgttg tgacacccct actcaaaagt tatgacagca gtgtaatgac agctactgcc
      301 tcttgagaat caatcaggca attaattttg taaatgaaat gctgattata caaagcttca
      361 catgagaggc ccagtgatta aaatcaattt aacaaattgt ttcaggtggg acttgattaa
      421 taatttacca taaatgctga ggatatatga ccagcatgcc tttttgtgtg tgtgttagta
      481 tagaactata tataacactt ggagtggaaa aaatctgcag ctaactgtat gtacttctgg
      541 cttttgacct agatgtgatt ggttatgcct tgtgtgggta cactgttgtc cccggtgtcc
      601 ataatgtcgc tttctcagct agtgctatcg ccagcaatta aatacatcta acttttaatt
      661 ttatttttgc taataaagct aagtaactga gaaagtgtat t
//
LOCUS       KCKM01001284             615 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20329apa ultra-conserved element locus
            uce-97, sequence.
ACCESSION   KCKM01001284
VERSION     KCKM01001284.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 615)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 615)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20329apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>615
                     /note="ultra-conserved element locus uce-97"
BASE COUNT          209 a          107 c          113 g          186 t
ORIGIN      
        1 acatgtgctg accctttaaa aaaaaatctt ttactatata cctagcagag ccaaactaaa
       61 tgaagctgag gtctctgtcc agcatttgga agccagttaa aataggaaat cagtgtttct
      121 ctaaatacac agagtatatt accttagtca taaaattggg gactttcaaa tctaatttgt
      181 tcagcactag cactgttgaa ggctgggaag tgttccagag gaaatcacct ccatgcaaac
      241 agagattagc agctccccat tgcagacata tggaaatgat tgcctataat ctccggtaat
      301 tgtggctgta ttacattcaa atcctgtttt caattttctt taacttctag actgattgtg
      361 ttattaaatc atgctggctg atgtgtttaa taaggaccta ttaaatgttt ataaaattag
      421 ggaaataaat acgggctttt agtcagattc tgtgatggat ctggtaacct attgttaaaa
      481 gtactgctgg taaaagcatg tctaaaaaaa gaaagactta aaggctccct ttaaaataag
      541 aaaccccata tctgagagag cctatttcca aaattatatt cccaggtgct tagagagaaa
      601 agaggaaccc aatta
//
LOCUS       KCKM01001285             410 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20345apa ultra-conserved element locus
            uce-177, sequence.
ACCESSION   KCKM01001285
VERSION     KCKM01001285.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 410)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 410)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20345apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>410
                     /note="ultra-conserved element locus uce-177"
BASE COUNT          136 a           79 c           67 g          128 t
ORIGIN      
        1 tatttaggaa aaatcagcaa gaaatgcatc tttctatatt ttccatttat tagaagtctc
       61 ctttcatcca agaaatatga gacctgaaat aaattgtacc atcctgcttt tttttttatt
      121 caaatctgtg ccagtgctag gcagtatgct aatgaaaaca ggttgataaa tgactccctg
      181 atattttcca gacatttttc tctcagaagt gctctaaact gatgtagctc aaagagaata
      241 aggcgcatta agtcattata tcaatttttg ttacccagat acttcagtcc cagttaagag
      301 ctgacagcca atataaaaca aggcaagggc atcatacgac tccatcgatc aaacgttgtc
      361 gtagatagat tgcctattac acaaatagaa ccagcagatt cagtttgtag
//
LOCUS       KCKM01001286             566 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20360apa ultra-conserved element locus
            uce-2315, sequence.
ACCESSION   KCKM01001286
VERSION     KCKM01001286.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 566)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 566)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..566
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20360apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>566
                     /note="ultra-conserved element locus uce-2315"
BASE COUNT          160 a          106 c          131 g          169 t
ORIGIN      
        1 aatggaagaa aaagaactgt aatcgcgcat ttacatatgc tcctaattgt tgatttgggg
       61 attttctatg aatatcgctt cacaaaacag atgctgttta agaaaagggg gaacataatt
      121 ttgtgggcaa tgaattaagt gtttttgtgg ccctctcatc cgtagctagg agcagtttgt
      181 ggaccgcgtc tgtgaacgcc gctcataatt gtttttcaca cataagttat gcaaatgagc
      241 ttttatggca actggcataa caattagcat cctccagcaa tattttagca ggttaattgc
      301 aaaatttcta aattgtacat ctgacttgtt aattaggcat gacagaggtg gtaaaatagt
      361 tatcttcagg cagtggcagc caggagctgc ttgaaatgca aagagcaacg attgattgga
      421 tttgagggtt acaattgtgg gagcactgct gttgtcaagt gccgctgagc agctctgctc
      481 catcggctgc ctcagagcaa gaaccacgtc ggtgctgaga ggatcctgcc atttacaaat
      541 ctgctttatt taactctgaa actctc
//
LOCUS       KCKM01001287             240 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20375apa ultra-conserved element locus
            uce-1603, sequence.
ACCESSION   KCKM01001287
VERSION     KCKM01001287.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 240)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 240)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20375apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>240
                     /note="ultra-conserved element locus uce-1603"
BASE COUNT           73 a           35 c           54 g           78 t
ORIGIN      
        1 cttctgctat tgatttgtag ccgcttgtca taatgacatc gggaagcaat gaatggaaga
       61 tgtgcttttg ataggattga aggggtgcaa aggggggaga aaaaattcag caagttttct
      121 atctcttctg cctgattaga tttttttctt cttttaagag ctttcacatt ccaataaaaa
      181 tgctaaatca gctctgaagc agaattgtta gggagtaaat agctagtcac atttaaagga
//
LOCUS       KCKM01001288             535 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20390apa ultra-conserved element locus
            uce-1531, sequence.
ACCESSION   KCKM01001288
VERSION     KCKM01001288.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 535)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 535)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20390apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>535
                     /note="ultra-conserved element locus uce-1531"
BASE COUNT          150 a          112 c           97 g          176 t
ORIGIN      
        1 aaagatcact tcataaaaag tactccctaa agggacgaat tccctgctcc taactggatg
       61 tcagtcagag ggatcagcac ccccagggat ctggagtctt tgcttgccct tttcattact
      121 gtgttgttag cattgtgtta cttcatattc ttctcaatgc aaatgagtag gtaatcatgt
      181 gtaaatcgtg ccctccagaa ggcacatgtg gtgagttttt ttccccaaat ctaccacagg
      241 gatttctcac atggaacata attacatctc tgccatatgg gctcatttat attctattac
      301 aggttaagct aatacgactc agaaatatgc taaaaatacc tcaaagtatt ttgaacactg
      361 tcaaaatgct tgtcatttct tgcttgcctg tttgattgtg aatgactgga tatttattta
      421 gagatctgca gtgccaagta atttcataaa aacaaaatca ggccggttct gtgttgcccg
      481 gtctcaaaga aatactttaa attctctcct atgtcatctt cttttggtaa cggca
//
LOCUS       KCKM01001289             691 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20405apa ultra-conserved element locus
            uce-5530, sequence.
ACCESSION   KCKM01001289
VERSION     KCKM01001289.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 691)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 691)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..691
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20405apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>691
                     /note="ultra-conserved element locus uce-5530"
BASE COUNT          223 a          109 c          140 g          219 t
ORIGIN      
        1 gctaaggtca gatgtcattt tcatagctct caatgttgtt aatatgtttt tgagtctaca
       61 tagaagggaa agcctgggaa aggagggaaa aggctgtata tacatctggg tgctctttag
      121 aagacaaact gtcggtggag ctgtggaaat gagggctcta agtctctcag aagcaaaaac
      181 tttggcattc tgtgaacaat agaggtgttc acagcagttt cttccaaact gtatggcact
      241 tttcagctag gattgtgtgc agtttgtgtc aaaacatttc agtgaagaaa tacaaataca
      301 gactaatgtt tgacttcttt tgttgtgttg aactggagcc agagaaagta tttatatata
      361 aatccacttg tgaaatgcat aaccctctca atgtgactta tatgtctgag gcttacagag
      421 aattcaagct gattgacaga aaataccgtt cttacagtgt cagaatgtat tatcatgctt
      481 atatagaaac acaaaaaatc cctttttcac caatgtatat gttcattgtc attatgttct
      541 gatatactgg agatgttcag gtactgaaat actcaatttg ctaggaccta aagctaccat
      601 aaaaatatat taggcaacca gatggataat tcatcttgtt ggtttaaaaa agtgtgcatt
      661 aaacattcag tatttgaagc ctgatctaaa a
//
LOCUS       KCKM01001290             597 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20421apa ultra-conserved element locus
            uce-6973, sequence.
ACCESSION   KCKM01001290
VERSION     KCKM01001290.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 597)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 597)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..597
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20421apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>597
                     /note="ultra-conserved element locus uce-6973"
BASE COUNT          189 a          117 c          107 g          184 t
ORIGIN      
        1 aaaaaagaaa aaaagaagaa acagaaaaat taatctcttg tcaatttgac ccactgtttt
       61 ttttgcatta ttgatatatc tgtaattttc atctgccctt tcttcagcat gtatatttat
      121 gtatgtaggg tttttttcta caaacctgca gtgcagtgca aagctagatt taaatatttt
      181 cagactgact gtacccgtca tttgcattcc actgactcat tcagagcaaa gacatctgag
      241 cagaaataca gcagataaaa gagaaaccat taatccaggg aagattactg gcacagaatc
      301 tttatcctgt atcctccctg aaatgagaca aagatcttac tatgtacatc cctctggctt
      361 agcttcagaa agtaagcaat acagtagtgt agacatggta ctttttaaag gcacattaca
      421 ttggactgaa acttcagcct tcagtcagag cttgtccctg ctgaggtgtt tttcagtggt
      481 tgctttctca gaagacccca aaactttttg gctcatgtaa tgggtaaaac aacttaacta
      541 cccctaaaaa gacagtgtgt gtctcctgga gaatggaaac tgttctgtag cacattg
//
LOCUS       KCKM01001291             633 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20436apa ultra-conserved element locus
            uce-3831, sequence.
ACCESSION   KCKM01001291
VERSION     KCKM01001291.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 633)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 633)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20436apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>633
                     /note="ultra-conserved element locus uce-3831"
BASE COUNT          186 a          105 c          129 g          213 t
ORIGIN      
        1 agggaactgg aagcttgtcc caattattca tgaggtagca tggtttaagc ttgctgaatg
       61 agctccagaa aaatgtgctc tggacatact gataggaggg atggatcagt attttaatga
      121 atgacttcaa aggtttcgta gtgccttttt attgtagcat gaaatatgta atattaggat
      181 acacaagtca agctcgtgtc tcattgacgt atttgtctct ttccccccca ggcttacttt
      241 ccatttaaaa gttggttaaa atacagaact tctgaagtgt ttaagcagct aatggtacta
      301 gatcatttta gattctgggg atgaaaaaga aaaaataaaa aaatcagact tacatccctg
      361 actggtgttt tccactatag gccctacatg tttatgtaga gggtattgca aacgtttgga
      421 gggatttggg agtttcaaaa ggaagaagtt tatacattag tgctgcaagt tgcaaaacac
      481 tgttgatatt caaatgttta ttgtgtaaaa tctgggataa gcttcagcat gagagctcct
      541 ttaagtgcct acaactattg ctaattcccc tcagcattga ggcttgcaca aaggccttaa
      601 tccaattcca cttttttctt tttttttttt ttt
//
LOCUS       KCKM01001292             720 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20451apa ultra-conserved element locus
            uce-1633, sequence.
ACCESSION   KCKM01001292
VERSION     KCKM01001292.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 720)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 720)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..720
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20451apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>720
                     /note="ultra-conserved element locus uce-1633"
BASE COUNT          210 a          147 c          110 g          253 t
ORIGIN      
        1 aataatatgc aatgacagca taatcatatg ctaacattta atcacctttt atatacaata
       61 ttaccctgat tcttctttaa atttttatgt tgtatattgc tgtacatttt tcttgctgat
      121 tgattctctt tattactact gattttattt atgctgctaa ttttttttcc taagcatata
      181 ttttaatgag tagttttgtt cagctaacgt ctacagaata agagaattca gcacacctgc
      241 ctaaataaga tgcttgagat cactgaggaa agaaattgac attttacttt accctcagca
      301 tggagccagg ggcaaagttt gatctgaaaa cttgcaaatt aaccaaaact gtcactcagg
      361 agttatgggc ctgaatgctg caaaatatgt tctttgaagt cctcatttca gcaaaattat
      421 taaaaacttt atatctaatt aaaattgtaa ctgcattccc atttttcaaa atctctatat
      481 cctcggggcc aattgggatg agtgaattcg caccctcctc tctgcagcac actgaactgc
      541 tcctacagca atatcagatc attaccatct ccccagctga gagggagcag ccattatcat
      601 gcagcattat taatcttctt gtcttatcaa cttgcaaatc acaagccatt gagccttatg
      661 gcatggttct gggtccatag ttattcattt tgtaggtcta cctagccttt gagtctcctt
//
LOCUS       KCKM01001293             635 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20466apa ultra-conserved element locus
            uce-3465, sequence.
ACCESSION   KCKM01001293
VERSION     KCKM01001293.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 635)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 635)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..635
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20466apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>635
                     /note="ultra-conserved element locus uce-3465"
BASE COUNT          202 a          141 c          120 g          172 t
ORIGIN      
        1 tattcagcta catgttaaga agcattaatg agaatagctt gcagttcagt ttacttagct
       61 ctttaaataa acatggacta ttggaaatgt tatacaacaa cgcaagcacc ataagtgcag
      121 ctccagctcc tgtcattcct gcagatgagt tacaaatcta caagaacttg tctgctccat
      181 gcttgcagcc accgctaaac ttaaattagc aactatgtag gcctcttcca aggcatatca
      241 gagaccagct gtgcaaggac ctgtcacctt cttgtcagtg aaagctttct gtccaaagaa
      301 ctttcgtcat ctcccattcc tcaagtagct ggatgtcact tgaagagaca gctgaagtca
      361 cttgcaatga atggtctcaa atcagagctc actgcccttg tcacagaaag tctcaccccg
      421 cagctaaaac tgtcactgat catgtttaga tatgtacact gaggtatcag attagaaaag
      481 agtatgcacg agatgggagt ttaaaagagg ccaagttgca aggaaaatct taatagggag
      541 aatcgagggc ttgaagcgtt agcccttttc caaacccaat ttatatttcc tatcaaatcc
      601 aataaaaaat atctagcttc taaaaacggc atgtt
//
LOCUS       KCKM01001294             927 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20482apa ultra-conserved element locus
            uce-4133, sequence.
ACCESSION   KCKM01001294
VERSION     KCKM01001294.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 927)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 927)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..927
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20482apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>927
                     /note="ultra-conserved element locus uce-4133"
BASE COUNT          180 a          301 c          189 g          257 t
ORIGIN      
        1 accactgctc ttcccagctc cgccttcggt cctcccaatc tacctcccaa ttaagaccaa
       61 caaatgagtt attatacgca cacaattcca gcacgtgcgc gagccggacc cacgcacccc
      121 aaacccgcgt gggcagacgc tgacccggcc ggctcctgcc aattatctcc tgccgggcaa
      181 aacaattcag agtttttgct ctcctctccc tccctccccc ttcctcttcg ttgttcttgg
      241 caaaaaaggt taattaagct cagaaaatag cccttttctc ccccctccta agcatgagac
      301 tgttaatttt ctctttatat ttgtatttaa ttaattcctg caaaggctct gactacattt
      361 ttttggtata atttcttcct ttgtctctct ctcattgtta atccttgcat attcagtttt
      421 cccctccctt tttcccctag atttgaaatt ctattaccgt ttcagaaggc aggcgtttga
      481 agacaaaatt gaatacccat ccagtcttga taagaaggga catttggtac taaccgtaat
      541 ttgtggagca gattttcccc ccaccctgcg gtcaatcccc cccttgctct ccacgctccc
      601 cgtgaaagat gtgcccgtca cagcattgcc tgtggctttg gcagcccccc tgtccctggg
      661 tcgctgtgtt agggccacgc tgccctggca gccgtgcatg gggacagggt gacatggtga
      721 cgtgcagtgc ccaacacctc ccttcacgcc cccgggagcc aaccctgcac cttccacttc
      781 actctttttg tgcagaggtg atgccctccc gtgctgcccc ctgtttttag gggaagctgg
      841 actgtgctca ccgagtaccc actgttttct gggggagctg ctctcctcag ctccgccagc
      901 agcctcgctg tgcagagcgc caggggc
//
LOCUS       KCKM01001295             909 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20497apa ultra-conserved element locus
            uce-5804, sequence.
ACCESSION   KCKM01001295
VERSION     KCKM01001295.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 909)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 909)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..909
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20497apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>909
                     /note="ultra-conserved element locus uce-5804"
BASE COUNT          275 a          178 c          176 g          280 t
ORIGIN      
        1 cctttttgtg ctttttaaag gtgggatgga attcacatcc tttagctcag cttttcaaaa
       61 ggactgtgtt actaatttta ttaattggat tctttcccca agaaaaagga aagagttggt
      121 tccgtatttt gacggagagg gaataacggc agaattggaa gtcttcctta tgataaaata
      181 aacactgatg tattgaagac aaagtgcatt attcttcctt gtgcgtgtgt ccccccaata
      241 gataatttgc tcccatccac ctgactgcgt tgctttgctc aagttaaggg ggatttttca
      301 gaaaaccaga cttcagtcac ttcccaagta agaagaaatc gtactggctg caaaagtatc
      361 aatatttcat caggtctttg ttcagcactg gttttagctt ttcttaatgg tacactttac
      421 caggcagctt tttcatacat cattaaacag cagctatagc acttgtgccc tgtttctgat
      481 ttaccgtaga tagtaatgtt taagatcaca ttaaacacca cacatgctct cagctatttg
      541 agcaacatca gagtaatgaa cagtcaatag tcttactaaa ttagtaccct ttggagctct
      601 tgttactgaa tcaaataagt atccttggtc ctctggtgaa gacaattcta atgtgaaata
      661 atgaatttag tgtctaatca aaacttaggg gttccttttc ccttctgact tccaagagta
      721 aatgatataa attatgtaga acagatctaa tatttccagc acccaagtcc tgcgagacgc
      781 tgctgaataa tcaccacgag tgattgagac accaaggtcc agtcacacac taataaaatc
      841 tgtgtgggga acggaggtag aggagttgtc ctcgggttac agacattcaa acaagaaaag
      901 agggtctca
//
LOCUS       KCKM01001296             853 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20512apa ultra-conserved element locus
            uce-7729, sequence.
ACCESSION   KCKM01001296
VERSION     KCKM01001296.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 853)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 853)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..853
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20512apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>853
                     /note="ultra-conserved element locus uce-7729"
BASE COUNT          237 a          165 c          199 g          252 t
ORIGIN      
        1 aagggtgtag tgaacctggc tctgagcaag tgttcagaga tgccagtgag cacaaaacgc
       61 gtctttgtgt ctttgagttt cacatgtaaa cgcgactcct gccgtgggct tcccctctgt
      121 gagcccccag ctccggctcg ggctgatccc cggttgtctg acgttggttt tgtcagaggc
      181 aggacgtggt agagggggat ggagagggcg ggtatttcgg tgaaggattt ggaagcgtcc
      241 gcatccgatg tgttgtcggg ttattaatgc tgttcgtgta ctgttactct ggacagagag
      301 gagaaatcct ttattttgtt cttccccttc tttgcctgca gtatctgtga tgcgagtgca
      361 gtctgaccac tatccccagt tgtcttgcat gattaattac agcatctgtc ctgtcagaag
      421 ctataatgaa gaggtcttga taaaaattgc aaattaccac tggcaacaat attaaactgc
      481 ttatgataaa atgaaaatta aaaacagcaa gtgtcaaacc tgagccgaat cctaatcctg
      541 tttgaggcgg tgtccatggc taccatgctc agaccacaac tgaaaaataa tggaatatag
      601 atccccaaaa agttggagcc agacttgagg gaagacgtac tatactgtga gagtttatta
      661 ataatgaatt cagctttcaa tatttcatca tcctcaggta ctctgtttat tatgtaaaaa
      721 tattgaatga caagagattc taattataaa tttatagatt tcttggagca gaaaaaatca
      781 tgtataaatt gaagcctttc gtaataggtg ttagttgaca gctacccatg ctcctaatag
      841 ccttagtatg ata
//
LOCUS       KCKM01001297             738 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20528apa ultra-conserved element locus
            uce-6473, sequence.
ACCESSION   KCKM01001297
VERSION     KCKM01001297.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 738)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 738)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..738
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20528apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>738
                     /note="ultra-conserved element locus uce-6473"
BASE COUNT          236 a          134 c          123 g          245 t
ORIGIN      
        1 tgtgtcaaat taaagaagca gtgtaggaag ttgtagaaca tgttaccagg catctttttt
       61 cattttagga atgtaagttt gttcgaggca taggaccaaa cactaaaagg ccctcgcatc
      121 aaggcactcg tttgtttgcg ccatccaaag agtctcttta acatcataaa ccgtatattg
      181 atgcttatga aacattttgt aaatctcctt tgattccagc actttcaatt acaccgttag
      241 ccagtttttt aaaaagattt ttggaagctt tcaactgtag acttttgtct tgttgaatga
      301 acttcagcta cactaaattt taagtaaatt tgtgatgact gagcaatata cattggctga
      361 gctagaatcc aataacccac aggacaaatt aattttcaac aaaaagggca gaaacctcaa
      421 gtgccatgag tatatggaat ctcagtctat ctctctggag ccatttttgc aaatcactac
      481 agctattcat aatctaaatc agtctccttt agcagcagaa agatcttttt tcatgacaaa
      541 acagaagatg acattcatta gtgcctaact tgcataagct accttaaatt tattggtgct
      601 cttatactta tccgggtaag aattcctttg tctacagcta taggaaaatt ccggatgtac
      661 tacttaaaaa tataaattgt cacttttatc agaacttttg gcagtttact ttattttaga
      721 agtaaaactg gtggttaa
//
LOCUS       KCKM01001298             382 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20544apa ultra-conserved element locus
            uce-4404, sequence.
ACCESSION   KCKM01001298
VERSION     KCKM01001298.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 382)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 382)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20544apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>382
                     /note="ultra-conserved element locus uce-4404"
BASE COUNT          125 a           62 c           66 g          129 t
ORIGIN      
        1 aaaaaatggt aaaatgactt tgaaagtcag tttattcctg tgctttaaca ccttccaaca
       61 gatgttgttc ttactcaaag tagagttcct tgaattattt aatggtttcc aacagctcag
      121 cttgaaataa tttagcattt gaaagagaaa agtcactctc attattccga gtgcagaaac
      181 attttggtta ttagaagtat tcttttaaaa aaaaaaaatc gtcagtacat ttcgtatttt
      241 tttctccaga tgctagcagg agcaccagat ctagggaaac ctttgtgctt gctgaaggtt
      301 aattgataaa gcataataga agagagaaga ctacatattc cgtttaaaat catggccctc
      361 ttatctgatc ttttggtagc tt
//
LOCUS       KCKM01001299             927 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20560apa ultra-conserved element locus
            uce-1367, sequence.
ACCESSION   KCKM01001299
VERSION     KCKM01001299.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 927)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 927)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..927
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20560apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>927
                     /note="ultra-conserved element locus uce-1367"
BASE COUNT          265 a          216 c          174 g          272 t
ORIGIN      
        1 tttgtctaac atttcacttc atcatctcag cctgtttttt ctccaagttg tcccttacag
       61 ctagatactt gctgtgagta tgaagtatca tgggcaattg tcacgtgata aattactggt
      121 ttcatccatc aaatattaaa gctgctcgct actgaccttg agcaccactt acgttgccac
      181 agccaaggcc cttttcgaag tcagcagggt acagctggca caaattcagc cgagcaatca
      241 ccctcacacc cctccacaag agttgggtct tttaaaagcg cggtggctcg cgcggtgcaa
      301 ccggaggctc gaccactctt gagaaaggtg tccgacaccc gaccgttcct cccgaggagt
      361 agtacctgct cacattgatt tgcagcaaag catttctcag taagtatttc cacttaacat
      421 ttactctcag ggaacctgtg tagtgggaga tatttacgag ttgctttcag cttaaaaata
      481 aatcacctct aattcctcta agcgaaatca atcaaaagtc tgtaaaaaat ggactggttg
      541 tttggtcgat tctggcagaa aagtaaacag cacttcagct tttctccacc attaaggtct
      601 aaatggccta gaaagtaaat caatatctcc agtcagcctt ctggctattg tttagccagt
      661 agatatggat tttctctagc ttactgcact cctttgggac taacctgtaa tcctcagaga
      721 gtaataataa gttcgttatc tagttcagct ctctgttgta catttaaatg gaccacatcc
      781 atcagcagca cttgttaaag ttaaagggca atgacatccc attcaaccta tttcacaggg
      841 aaacactcgc tatacctgct ggagaaaatt attataaaaa tctcatttgt tgtcaggtta
      901 ttaaaaatga aatatcacaa atgaggt
//
LOCUS       KCKM01001300            1089 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20575apa ultra-conserved element locus
            uce-6553, sequence.
ACCESSION   KCKM01001300
VERSION     KCKM01001300.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1089)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1089)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20575apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1089
                     /note="ultra-conserved element locus uce-6553"
BASE COUNT          330 a          191 c          223 g          345 t
ORIGIN      
        1 tttaaacatt tacagttttc gaaagtttcc aatctgccat taccactaag ctcttaaaag
       61 aattcctcat ctagaagtgt ctaagtaggg cattattact tcatcaaaag atgaaaatat
      121 ttttctaatt atgtgtcaat ttaaattgta aagctctagc agaaatcctt gtgtttgctg
      181 gttgtttcct ttaatacatt tcagtgagaa agacaggagt tgtgagtgtc agcaagatat
      241 gccttcaaac tgtttaggtt tgattgcatt gcattataga atgcttcatt actagtttaa
      301 cctctcaaag gttttcagct gctgttttat ttagctatac cgactacact gcctacagca
      361 actccaggca atgattcccc cagtggcatg catgagctgc cctgctctac tgcaaaaata
      421 cattatggct gaatttgccc tcagagtttg gaaagatcta aagtctttgg agactaaaaa
      481 tgtggttttt tctttgtttt agctggcagt atgagcctct ggcattttaa agtgcaagtc
      541 attagcgtcc acaagggtga tgttaatatg tctgtgtttc aatctcagga cattttccag
      601 ttgcttctgc cacaacaatc tctgccatct cagtgctttt taagcccctt gtgaattcaa
      661 gtaagctttg caatgccagt aagaatcact gtagactttg gctgaaacca gttgctacct
      721 gatttcttct ttttgcagta gttggcaatg aagttgaaag tcattcagag ctacttgagg
      781 tgggggggaa tgaagaaaat gagggaagca gtgtttagaa atgttaaaca cagtcaagaa
      841 gactagagga ttttgaacaa ccttatgttt ttattatttg tatcaattaa ggagctgtgg
      901 tttagactta aagtaataca tgattgcaca taaaaaatcc cagcaacagt gataacatgg
      961 catccagaaa taaaagcaaa ctaaaagatc aattgaagca gtcgagagcg tagcctgagg
     1021 gactagatga cagtcctcat tgatgagaag gatggaatct gtcaacaaag gtaatgcctt
     1081 gtgggaaat
//
LOCUS       KCKM01001301             944 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20591apa ultra-conserved element locus
            uce-4883, sequence.
ACCESSION   KCKM01001301
VERSION     KCKM01001301.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 944)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 944)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..944
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20591apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>944
                     /note="ultra-conserved element locus uce-4883"
BASE COUNT          314 a          195 c          153 g          282 t
ORIGIN      
        1 tacttgaata cttgaatgca atccaatgta cccttagcag atacaaattg ccacagatgg
       61 ttgaatttaa ataacatttt aaaatctctt gctatttcta ttttaacatc taaattttga
      121 tgtccagttg caagtgttta ccatagaaga ctcggtcaag ctggtgtttg acctttgaca
      181 ggaagctgcc ctcactccgg ctagtcccaa caaactaggc ccaagacaat aagctgcttt
      241 atagctatta gctaggccag tgtgtttctt caggaagacc tcaagctgaa aagccaacat
      301 gcttgacaac cacagccaag gtaccaaggg cccaagcact agacattaga aaacaaatgg
      361 aaaagcacac atggctacat ctggaatcct aatgggccac caatggttcc cagctaaagg
      421 aagaattacc aatgttattt tatcatccct tgtgctaact tagctgttta tgtacagcaa
      481 taaatgattt tttaaaaaca tatttgggtc attatgtcat ataccaccag caagtacgat
      541 tgttttattg tgcttggagt caaaatacac tgctataccc agatgtgagg gaagttcaaa
      601 acctctggtc cttctgtatt cattcctgtt ggacaaatgg attaagtttt taaaagggaa
      661 actgagaatt tttatggcct gtactcccgt ctcactagta aaattcacac tgatattttc
      721 ctacaaaagt ttgccttgcc aacgataaca ctaaatatta acttagtaag caaaccaaaa
      781 tctcaaccaa caggaaatgc cacacatttt attgtcaaac atccccattt tcttccaaag
      841 ccataatctg ttatattaaa gaaatacttt aaatgtgctt gttttacctg aatatctatt
      901 gaaattcaag gcaaagtaat catcacactg tgaaatgaaa ttaa
//
LOCUS       KCKM01001302             779 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20606apa ultra-conserved element locus
            uce-7397, sequence.
ACCESSION   KCKM01001302
VERSION     KCKM01001302.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 779)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 779)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..779
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20606apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>779
                     /note="ultra-conserved element locus uce-7397"
BASE COUNT          219 a          214 c          149 g          197 t
ORIGIN      
        1 gctggatatt taaagctata tctgtaacac gcctgtgaca gacacacatc ctgtgcttcc
       61 actttccaag aaaagtggga tctgctactt ggtaggtctt ttccatctgc agcttttatg
      121 accctgccga gggaccggtg agcagtgtcc cccttttctc actcaagaaa tacgctacca
      181 aatgccagac aaaagaacga gtttaagagc tgttgggctt aacagtggtt tgtgctgatc
      241 acactcgaat ctttctgcaa aggcatacat gcaaagagga aaaaacaaca accgctaagt
      301 aaccacttca catctgccat taagataatt caactcctta caagcggtat ctaccccacc
      361 ttccccacta cacacaaaca tacacacacc cccaagctcg gcaacatggc aactaggagc
      421 caagagggct ctcctctccc tgctgcagca accacattcc ttcctgttaa ggggttaacg
      481 attcgtttcc actacttctc tcgagaaaac ctacaatgaa aacattggct cacgaaagcg
      541 ttctcactgc cagaatgcca cagctcgagt gaaaagtccg ttttgttttc attacatctc
      601 tgggatttcc ggcttaactc ctgagcttag acaccaaatc cctagatacc ccacccaccc
      661 actttttctt tttttttttt aataacattt ctgctgcacg gcccaccaat taccatttgg
      721 agggtgggag ggaacaggga aaaggaaccg tgtgaaaagg atgctctcat cggagcgag
//
LOCUS       KCKM01001303             765 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20621apa ultra-conserved element locus
            uce-4304, sequence.
ACCESSION   KCKM01001303
VERSION     KCKM01001303.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 765)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 765)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..765
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20621apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>765
                     /note="ultra-conserved element locus uce-4304"
BASE COUNT          229 a          133 c          153 g          250 t
ORIGIN      
        1 tgcttcagtt taccaggaga aatgagcatc tgtgggaact tctttgttac tggtactgtt
       61 tcagaagcca ttttcagagt ccagctgtaa attggatata agcacttgcc aaatgcaagg
      121 ggagtggttt ccactttggt ctttgtgttt attgtttctg cactggcaat agaattgaat
      181 tcatagcagc agcaaaacaa agacagctct gagttatact gaaattcact gctggagatt
      241 tatgaatatt attttcctgt aaaatccagc atttttcgct ttactacttg taacctgtaa
      301 gtggcataaa attgtgtacg tagcaggatt tcctactgca gtgcatgcca aacaccaatg
      361 taagaactgc actacataca catgtggtta tacagtatgc ataaattgtg cctttatgtt
      421 taacttgtct aatcagctca ccatatcaaa acttaataag tagctgcttc tcatttaaag
      481 gtctagtaaa actgcaatta ctatggctgt aagatgcctt gtttcgaaaa gagcattaaa
      541 atagttttat agatatggtt agaagcactt gtgtagttgt ttttatgaaa gtgaatgagt
      601 tcattaataa tgagagtcag agacagaaat ataagttggg agttggtgaa gtattctgtg
      661 tttgcatctg ctccttatag ggtatcctta aagtgtaagc cacttttgcc tccacacaga
      721 aaaccaggca tgtctgtaaa ccactcttcc tctcagggat agaac
//
LOCUS       KCKM01001304            1120 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20637apa ultra-conserved element locus
            uce-172, sequence.
ACCESSION   KCKM01001304
VERSION     KCKM01001304.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1120)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1120)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1120
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20637apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1120
                     /note="ultra-conserved element locus uce-172"
BASE COUNT          291 a          219 c          210 g          400 t
ORIGIN      
        1 tattactcta gtatgttcaa aacttatttg catttggata gaaattcatt agctcttgtt
       61 ttttattata gcaaattact ttatctgttc tgtgataatg cattctctgt gtttctgatt
      121 tgctgatgct gaaatatttt gttttcattt taacccctcc aaatttggga ttgtttttgc
      181 tttttttctg tatatgtatt tcagttgttt agacctactg gttcctgctt ttttcttttt
      241 ctttgatatg ttgtgttcgt aacttctgac tgtctgtgtt gagccaatct taccaacaaa
      301 aatatcagtt gtttcctgtt tctctacttc tttacaaaaa aaatgaaaag taaaaagtaa
      361 aaataaaaaa ctcttaatgg gaaccctggc actgtctgtc ttctctgttc tgcagaaatg
      421 ttgaaggagt tgaaccagca acgcagagcg aaagagttta cagacctgaa aattattgtt
      481 gaaggcaaag agtttgaagt ccaccaaaat gttctagctt cctgcagctt gtatttcaag
      541 gacctgatta aaaggtttgc cttccttcca gctgtgatct gctctgttct tttgtagggc
      601 gcatttgtgt cgcttttttt tcctcccctc tcttgcaggt ttatgaagat tgaatctcct
      661 gtcacagagc cagtagccat tctttccacc tcctctgaat gtatttccaa actgagactc
      721 agacccattt gttacacatc tgactcgtac agtgtaatta tttctgatga gtagaggccg
      781 gttttggctg aagaaagtgt tccaccactg agagatctga gattcaaact gaactgctaa
      841 tggtgattca gaccacaact aaaaactatt gctctcgatg tcttcaaggg actctgtcac
      901 acgcgacaga cgtctgtcct tcaggctaca ataagccatc agcgtcctga tgaacgatgc
      961 tgagacatcg tgctaataaa gtattttgag tatcagaatc ccttcaccct gaaatcttgg
     1021 ttacatgctt tcgtgtggct tttacgggca aagggattga tatttttatt attcgggggc
     1081 ttctaaaaga cgaaaaggca gctgattaat ttctctagaa
//
LOCUS       KCKM01001305             737 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20652apa ultra-conserved element locus
            uce-4079, sequence.
ACCESSION   KCKM01001305
VERSION     KCKM01001305.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 737)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 737)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..737
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20652apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>737
                     /note="ultra-conserved element locus uce-4079"
BASE COUNT          240 a          136 c          123 g          238 t
ORIGIN      
        1 tgaacatcta cagcaagcta cttggacaat gttgcaagat ttttaaaaag actttctaca
       61 gtcaaaaaaa agtttattaa tcagaattgt aagttattta ttttttatat tctgctttca
      121 gacatctcac atttagtaca atttggtaca gtacacgaaa ctatttaaat attgctttca
      181 actttttgga gccttttgtt ttaccagact tctgtgttac ttcactatgc aatttactga
      241 aggctagtaa ttattaggac atgtggtagg cgtttatcac cagtaacatc acacaaccca
      301 ctctatgatc aagatacaat agggcaaatg gtacaattaa aggcacattc tttggtgcat
      361 aacaatagaa gccttgtgac atggcaagat taagaaaaga ctcaaacatc tttaaaacta
      421 ctcattacca ccagttaaaa tgtgcatgtc tgacctttat ggtaatcagt agtactccac
      481 ttgtgcacta tagagctaaa taagctttat tttagacaca cagatttctt tgtgatgacc
      541 tgcatttaac ttagctgatc tcagagctgt cgcttacaat gaatcaaccc atcagtggtc
      601 ataatgatag gccatcatct ttatcaacca gtttatgatg acaggcagag aacagtactg
      661 tagattttcc tgccaagtgg agtggtactt aaatgttgac tgctacatac atcagattaa
      721 caaggttgca aagttgc
//
LOCUS       KCKM01001306             671 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20668apa ultra-conserved element locus
            uce-2162, sequence.
ACCESSION   KCKM01001306
VERSION     KCKM01001306.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 671)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 671)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..671
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20668apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>671
                     /note="ultra-conserved element locus uce-2162"
BASE COUNT          226 a          115 c          151 g          179 t
ORIGIN      
        1 gaacaaaggg aataaattca ggaagaatga aggagggaaa aagaaacctc tgacctgaaa
       61 aaaataaaca aacaaaaaaa agacactaag atgaaaacaa aatagtgcca tggatttaca
      121 tatggggttt tgatggaaac tagggctggg ttttaaatca aaactcacca tctcaaaacc
      181 acttcttttc atccgcctgc aggacttgag gtaagtacgt atgcgttttc tggcacgctc
      241 ttgatactca gggaattgtc gcctgcatga gtcaatgata gcctggatct tttctttggg
      301 ctgcttagag attgggacca ttcggtccaa gttttcatct acaaacagcc tgacaaacat
      361 ctgttggcaa gagggagaca gaggagatgg gtttggaggg cggctctctt ctcttcctag
      421 ctttctgtct tgattactga taggaagaca tttttgctat ccactgaaga gctttgtaat
      481 gggaagccag aaatattaag caaacagttc tttaaagggt tatttcggag gggggctgat
      541 taaaaaaaga caagaaaaaa tagtctacag gatacagacc ttctgagata aaccagaaca
      601 gattgtgaaa ataggcacta tttaagtttc attattaaca ataagctgtg attgctcatc
      661 atttgactga a
//
LOCUS       KCKM01001307             588 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20683apa ultra-conserved element locus
            uce-5871, sequence.
ACCESSION   KCKM01001307
VERSION     KCKM01001307.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 588)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 588)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20683apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>588
                     /note="ultra-conserved element locus uce-5871"
BASE COUNT          164 a          125 c          116 g          183 t
ORIGIN      
        1 ccggcctgct cagaagctgc aacaaccagc agccctgctt gcaacctgta tccgacggtc
       61 tccccagcgc atctattaca cagaatttac tgcagcagaa taaactggat ttaggaaagg
      121 cacacccagt tcttggaacc agggagagca attagacgtg cttctgcccg ctgaaactgc
      181 acctccggtc tgtttagcaa cattcatgat tgctgcagct tcaagatttc atgttacatc
      241 tttaattgtg ggcatttagc agactgcctc ttattattaa gatactgctg acttttattg
      301 tcaatgtggc cacaggacaa ggctaataat taccagcacc agcagcagct tgtggtttta
      361 tattacattg aggtaaatta cactggaatt agagtggatt acttttatca aatggggaat
      421 aagctgttaa ttaactccct gctgtagcaa tctttttcag agcttgcaac tgttattagc
      481 tctagattaa actgttgaat taatttccca cttacttact atttcaagag tttttaattt
      541 acctggcagc agttttaatg ggaaattgta ttagcgagca taaattgt
//
LOCUS       KCKM01001308             650 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20699apa ultra-conserved element locus
            uce-1917, sequence.
ACCESSION   KCKM01001308
VERSION     KCKM01001308.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 650)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 650)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..650
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20699apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>650
                     /note="ultra-conserved element locus uce-1917"
BASE COUNT          196 a          104 c          147 g          203 t
ORIGIN      
        1 tggttagttg catccaatgt tatttcttac tgagaacttg ttttgcaaaa tgcttttgtg
       61 ggggagaatc tgtaacagta taagctggaa gtggctgtga ctgcattgct gtctctgaaa
      121 cagaacaagt gtatttcaga ccagtagttc tcaaactttc agcagtgtgt ttctataaat
      181 atattttggc tgtgtttttt taaagtgggc tctttggatc caatttcctg tggttcactg
      241 cttgacaggt agaaaaataa atattttttt ctttcagatt ttaataacaa tgaaaaagtg
      301 cacaagcttc atggtcaaga caggacagtg ggtacaaaaa aattgttatc ttaaggcaaa
      361 atttactgtc agggaaaatg gaacattcct tctgaactca cgaactggta gtgcatgtgc
      421 aggttggttg tagatggttg ctacaataag gcttctttca tacaggtgtg tttatgcccc
      481 aggcttgctg gccacagtcc attccattta cagaagctga attaaacaat aactaccgca
      541 ttgcaaaaag aagaagaaaa aaaaaaaagg tgagcgtcaa aggagatgcc tgagagcttt
      601 gttagggcca agaaaaaccc tgttgcagtt gtcagagctt gttgatgttg
//
LOCUS       KCKM01001309             758 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20715apa ultra-conserved element locus
            uce-6054, sequence.
ACCESSION   KCKM01001309
VERSION     KCKM01001309.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 758)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 758)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..758
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20715apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>758
                     /note="ultra-conserved element locus uce-6054"
BASE COUNT          241 a          144 c          133 g          240 t
ORIGIN      
        1 agtatacatc cagcccacag taataatgat tcatatacat atatgtgtat atgctttatt
       61 gctaccttta gctggattaa aagcaatata tcaaatttta tatttctgct tcttttatta
      121 gctttctagc acttgatcag ctgatagagg caataatgaa atgttttttt ataaactgga
      181 gtttgtaagt cctatcccga gaatgtaata tttcaaaaaa tagcctaagc tttggggaaa
      241 aaaccaatta cagaaacagc attaaaaatg ccaagcactg ggcagaagca attctggatc
      301 agtttaaaaa agtgattgat gaaactctaa tctgagctga agtaacagtt tcacgacaag
      361 ctgtgaccat tccacacact tcattagctg ccataattag cctggtgttt caatttgtta
      421 gaactggtgg ggacaatttt actcagaatg caaacatcaa aaaacagggt gcctcagact
      481 tcacaagagg ctgatgagaa gcttttctag tctctgttaa ctaaaagatt aattacagct
      541 gatgggaggc tgtactctga ttgtcactct gtctatgtgc attactttta gcattagaag
      601 aaagacatgg ttgacactac actgcttaat caaacagcct cacattagcg cacaaagtct
      661 gttaatatgt gatgttttta ttgtttccct ttttcttccc accccccccc caagtttgag
      721 gctttcatat ctctcaagtt atacgttaaa aggacagg
//
LOCUS       KCKM01001310             651 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20731apa ultra-conserved element locus
            uce-1706, sequence.
ACCESSION   KCKM01001310
VERSION     KCKM01001310.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 651)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 651)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20731apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>651
                     /note="ultra-conserved element locus uce-1706"
BASE COUNT          169 a          117 c          156 g          209 t
ORIGIN      
        1 gcacattttt tactgcttca tcacaagttt tgtgtggtgg caaatgggga gattttacag
       61 tgaggaaagt gttcaaaata gggactgctg ggagttaagc acacagtaac tgtggaagtg
      121 taagagaagt gaatttcatg tttgggtctt tctgcttttt agttttatac ctctgccatg
      181 tttcagcagc tctccaggtc tgatgagctg ttgtttgtga aactgttgtt gctgtctttc
      241 tccagcctgc tgaattcttt ccttgttatt tcaacaggga gaaccatgaa acagagaagc
      301 cagccctgaa caatatagcg gacaatacag tagcaatgga ggtgacgtag tttccgcagg
      361 agggaaactg cagccttggg aactcgttta ggtgctatgc atcagtagca ttttgaatgc
      421 aagggaggat ggaatgccgc acattgcgtt tccatggcag ctgtggggac ttgacagcaa
      481 tgcacatctc tcatgctttg gtttttcttt tcttactgtt aataggacag aatcaacatc
      541 tgtaaattaa caatacagca attatctgta cagtactgca tatttgtaat acccttgtat
      601 atatgttact tgaatacaaa actggtcatt tgtgatgctt tgcacttggg g
//
LOCUS       KCKM01001311             809 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20747apa ultra-conserved element locus
            uce-2671, sequence.
ACCESSION   KCKM01001311
VERSION     KCKM01001311.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 809)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 809)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..809
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20747apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>809
                     /note="ultra-conserved element locus uce-2671"
BASE COUNT          206 a          192 c          187 g          224 t
ORIGIN      
        1 ggggggttga agtaacttct aaatgtccct tcaaactatt ctgtgactga ccatggagag
       61 gaaatatccg cagagaccca cttgtatgac ggtgccctcc ttgtcactct cttcttccca
      121 caggttgcat ctccgacaga cacaagcaat tttgacagct tcccagagga cagtgatgaa
      181 ccaccccctg atgataactc aggatgggac atagattttt aatgtatttc tcttacctgc
      241 ttctgccttg ctgaagacag cttcctggga cgtggctgcc agcgaaaccg aacgaaatgg
      301 ggaggattag tgctcggggt caccatgatg ccttgattga tgctgctaca gtaactacag
      361 tggcattagg acttaccgct tagatgacga tagtgctctt catgttttat gttcgaactt
      421 aaaacagcag ttgacatggt ggtcctgacg caaagccctt caccggtaaa gaaacccgtt
      481 tcctatcact gcgacgacag tcttgctacg ctcttaatta gacaagtcga gagacataag
      541 atgcacttaa ttctagctgc gaggtactgg ctttatgagt aggatccata gtaatttatt
      601 aagtgctgta gctaaataca gcgcaggatt tgggctactc ccaccctcct ggctccaaag
      661 gtcttctgct gtcggccagt gtaggagcaa aggaggacca caacggtact ggtcaaagag
      721 ttcacgtcaa agcagtggta aaacttgtcc tttccctttt ccgagcagta ttgctgacaa
      781 gactgaatgt tagctttcct ttttctttt
//
LOCUS       KCKM01001312             404 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20762apa ultra-conserved element locus
            uce-7971, sequence.
ACCESSION   KCKM01001312
VERSION     KCKM01001312.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 404)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 404)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20762apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>404
                     /note="ultra-conserved element locus uce-7971"
BASE COUNT          143 a           67 c           85 g          109 t
ORIGIN      
        1 atctaagtgt cagcggaggc gctttacaaa tgtgggtctt aacagcagaa agcagagcag
       61 aaaacgatat aagaaatgac agtaaagtca ctttagtttt aaaaatggac cagtaggaca
      121 atgctaaccc caagagaaat tcgcagcctt ctccctgtga gtggatttgc caataaaagc
      181 aactagacag ttcaataaaa ctaattaaat taatctgtca tccccaggga acttaaacag
      241 ggcatgaaat agggaaacgg cgtcaattca gagcttttta ttgatgtgtt gtgctggatc
      301 attggaaaga atcggttggg agaaaagatt tgcaattttc tgttgatcat aaattcagga
      361 gctatctctg tgtaaccttc attcaatata gtataaaatc aaat
//
LOCUS       KCKM01001313             906 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20778apa ultra-conserved element locus
            uce-2840, sequence.
ACCESSION   KCKM01001313
VERSION     KCKM01001313.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 906)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 906)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..906
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20778apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>906
                     /note="ultra-conserved element locus uce-2840"
BASE COUNT          230 a          189 c          234 g          253 t
ORIGIN      
        1 tagtgctcgt tgcagctggc gtgactttcc cccaagttac agctaaaagg aaccatgagt
       61 tgtgtaggag aacagaccta gcttgaaagc agtggaagac aagacctcta ggtgaatagc
      121 acgatgcccg agctcggaag acggagagct gggaaggtca gatggagttg agtctccagc
      181 cgttgcgctg gagagcagag tccaggagga gaaatgccgg gggtgttgcc aacactctcg
      241 tgtgctgttt tagagcttga aagagagtca tggatgcctc gtggatgtcc ctctgaaata
      301 aatagttgac tctcaagatt cctgttaata actcgataac ccgtatcttc cagataatcg
      361 ttatgtacct tcaggtatta gaatgtgaac gtaaccaaca cctggtccag acgtcatggt
      421 aagttgattt tctttgttac gagagaccag caggggcagt agcagaaata tgtcacttga
      481 ggcactctgg gcagcattgc gcagggatga ttgtgggcca cgccaggcag ctccagtgtt
      541 tcttggcgtg ccccaaacta ctccccaaat gttgattggc ctcttaattt agaggcgctg
      601 ttttaatggt aaggtagctt tccaccctga cttctcactt ccctcctctc cgctttcact
      661 tttcagctga agggagaatg ttgagtgggt tatagaactt ccttgggttt ttgttcttca
      721 gagaaaaccg atgtgtagtt ctagtctgtc accagtgctg ggaaatggct tttccctgag
      781 tttgagtttg attacaggtg tatcaaaaac tcagcacaga taaatacctt ttatctgtat
      841 ggatagtgca agatgtcagc ttcaaagact ggataaactc agtatttttg tgtttgccaa
      901 gaaatg
//
LOCUS       KCKM01001314            1055 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20794apa ultra-conserved element locus
            uce-6890, sequence.
ACCESSION   KCKM01001314
VERSION     KCKM01001314.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1055)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1055)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1055
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20794apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1055
                     /note="ultra-conserved element locus uce-6890"
BASE COUNT          286 a          200 c          223 g          346 t
ORIGIN      
        1 gattttattt cagaagacta tagtgttata ttgtctgact acttcagcaa attaaaggaa
       61 cgccagcaaa gttactgcac agtcactggg cctttctttg ttggccacgt tgggtatgat
      121 gaggtgtgtg tgtaaacgac tttttttctt agctctgtgt atttttcagt accaaatgtc
      181 agataatgag atgaaaacat aattttgaac tttctgttta gtcagctaat tttcgaattt
      241 gccaaacgtg ctactatcat tgggtaagtg atgcttctgc aggtgcccca gatgccaaac
      301 tctgataaaa tccaccctat cttgttaatg aacacacaaa cagttgttcc ccatctgctg
      361 cctctgtctg aaaggttagg aagcccttcc ttggtgatca caaaggacat aattattgtc
      421 tgtagaggag tcaagtacaa agacagttca tccagtctga ccgctgctac actgcaggcc
      481 accaaagatt aacagctgct tctcctttga ttaggttagg taataacagt tactttagtt
      541 aataattgga tggattccgg ggccatgtaa ttcaggttta ggctgtcatt ttttgctggc
      601 atgtagctga gctgtattat tggaacggag cctgtaatcc tattagtcag ttgtcactca
      661 agcccgagga gaggagagaa ggggaattca aatccattaa ggtgttggaa caggcaggta
      721 aataagtcag ccacgctagc ccagtgtgca gggaactttc ttgcttgaca tcattttttt
      781 aatgaaggat taattttaag tttcttaaaa tgtgtagttc ataattaatc cataaaatgg
      841 tcacatgctt tgtttgttgc tatttctgtt tactttgcca cacgtgttag tgtacacaca
      901 gcttctgctc aagtttcttg attcatgcag agctctgctg aaattagttg ctgtgtgctc
      961 taaatgacaa actctgaatg gtccagagat taggaatgct taatttcaca tcagctgtgt
     1021 tggatttctt cccatacaga caagaccact gtatt
//
LOCUS       KCKM01001315             802 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20809apa ultra-conserved element locus
            uce-6608, sequence.
ACCESSION   KCKM01001315
VERSION     KCKM01001315.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 802)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 802)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..802
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20809apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>802
                     /note="ultra-conserved element locus uce-6608"
BASE COUNT          234 a          172 c          171 g          225 t
ORIGIN      
        1 aatttatcta tgctaaaagt gtaactcctt accacagcct gtgatttgaa ggcactcttg
       61 tttttccaat cgactaagtt tggtcagcag tggcccttga acatggtctc cagtgatcta
      121 ttagtaaact gggatgtagc cttcatttca ctggcctgtt acctctctct cttgttggaa
      181 tatattaaaa gaagcactgc attcaaggca accaagtgcc ctattatgga gcaaaaatat
      241 aagttccaat ttcgtgaggc atttcaagac aaacgggagt ctgcaaagac tcaggagggt
      301 atgagaaggc agtcacactt cagagaaaga caagctgctg tggaagacct ttcctttcta
      361 gtttggggaa aagagaaact tctgatgcgc tcactggaaa acagactgca taatggagca
      421 agtcatgtgg attgcccaga gcctccggag aaatacagga gcaatttcta ttccgtagtt
      481 gatggctgtc tgaaattcta ttcacaaatc caaacagaaa caaagcctca ggaggtcaca
      541 actgcttcct cgacgtttgc ataatgggca gcttgaagac aacgtcgagg atacctgctg
      601 atcaatttaa ctacttcaac atgttttgtt tgtattatgt ttatatttga tgcagtttgc
      661 tgacaagtgc aagccaggcc tgagaaaccc gcttgtcagg ttgatttatg agcacatcaa
      721 actgtaactt tctactcgcc actccaaacc tacagtagca gttcattaat cagaggcctg
      781 tgactttgaa atctgcgctc aa
//
LOCUS       KCKM01001316             391 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20825apa ultra-conserved element locus
            uce-7234, sequence.
ACCESSION   KCKM01001316
VERSION     KCKM01001316.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 391)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 391)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20825apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>391
                     /note="ultra-conserved element locus uce-7234"
BASE COUNT          147 a           70 c           57 g          117 t
ORIGIN      
        1 catataaaca tgtagatttg attctctttt tactcaggct gtaaaaagaa agttttaaag
       61 tgtttagccc tacctgaaaa tgtaaatgca ctggcctaat gtaatgctga agaaaaatta
      121 agacaaatga tactgcatcc ttgccacaaa ctgcagcttg tacaaaattc actttagtta
      181 ttatactgtg aatacgtgtg ctaaacctcc tctgtgtatg cacaatttat gttgaatgca
      241 acatgaatca ttttaataga ccaagcaaaa agtccccaaa gtcaattttc aaattatgaa
      301 ccttggaaca gaacgtaaca acaatgaaca acaaatagtt cagattttat tctgaactac
      361 aaatgaacca ttaaaggtac agtatactca t
//
LOCUS       KCKM01001317             459 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20840apa ultra-conserved element locus
            uce-2801, sequence.
ACCESSION   KCKM01001317
VERSION     KCKM01001317.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 459)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 459)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20840apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>459
                     /note="ultra-conserved element locus uce-2801"
BASE COUNT          138 a           91 c           84 g          146 t
ORIGIN      
        1 ttagatgtct ttctaattgg tttaatctta attgggttga cttaattgca aaaatctctt
       61 tgaggagatg actgtctcag cctttcatct tccccccctg tataaacagg agattaaatg
      121 tcccccactc attttctgca gaaaaacgcc cctacacctg cgaggtttgc aataagtcct
      181 tcaaacgact tgatcaagtg actgcacaca aaataataca cagtgaagat aaaccctata
      241 agtgcaagct ttgtggaaag ggatttgccc acagaaatgt ttacaagaat cacaagaagg
      301 taaagcactc tgctgttgtt gtttacaggt ctgccagcct cagatttgca ggttttcttt
      361 taagttgttc atcattaagc tctggcttaa aagcatggga ttaaagtact ggagaatgta
      421 ttttttagtg ttctttgcta catccaaaat ttcaaaata
//
LOCUS       KCKM01001318             525 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20856apa ultra-conserved element locus
            uce-519, sequence.
ACCESSION   KCKM01001318
VERSION     KCKM01001318.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 525)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 525)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20856apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>525
                     /note="ultra-conserved element locus uce-519"
BASE COUNT          168 a          100 c           89 g          168 t
ORIGIN      
        1 ttataacagt atagcaaaag aaaaaacccc acacagtaaa gtctatatta tatatttttt
       61 atgtctttaa atggaattta cagttctccc tggcaatgtg aatgaacatc ctataattta
      121 gtcaatttac agattacagg ttcaaattga ccttgtagcc cataaaattg ctcatcttca
      181 gtgcaggatt agaagtggga aaagaatgtc ataactgtat ttaaggaatt taccataaca
      241 atggaaagga ggatatgcat gcataatttt agccattctt gctcacatca cagttttcaa
      301 ttctgaaaca atgcatatcc tgcactcttc tcctggttaa ccatagtgga gactgtttca
      361 atttactcac ccacagacat gacacttgta ttccctcatc ccaaggtgcc tcttgacatg
      421 gtttctggca tctccaagct gagctgttgc aaagtggcat atcttgcact tgaatggctt
      481 tgatcctaag taaaatttag cataggatat gagttgaatt agaat
//
LOCUS       KCKM01001319             800 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20872apa ultra-conserved element locus
            uce-7726, sequence.
ACCESSION   KCKM01001319
VERSION     KCKM01001319.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 800)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 800)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..800
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20872apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>800
                     /note="ultra-conserved element locus uce-7726"
BASE COUNT          233 a          180 c          170 g          217 t
ORIGIN      
        1 ttttttgcct ttaatactct tattctgaga ccacgtatga caatacctct tggaaaactg
       61 cttctgtcca ataatatgct caaagtactc ctttgccaga ggcattcact cattatataa
      121 atcaaacaag catagaaaac cagacaaaaa gtgactggtg atgcccagtg aatttctctg
      181 ctcagctaag atgatttggg tgcattgcat gcagatgtca ggtattttta taaagagctc
      241 cattgtgcag ggccccacta ctcctccatc gctcccagca ctcccctaaa aggggggcgg
      301 tggggagaca accattccag ctgggcttgg aacctcgtct gagtcaggaa aaccacagct
      361 cataagcaaa gaggaagcat aatgttctac aaggacaaaa cattagcaaa aatgtcactc
      421 agccccagtt ccacatgttg gctgccacgg cctcttcctc ctagcatgcc cgattgatat
      481 aaattccatc tgctcagcag ccaagtgaca gagaagaaat accggcatct ggtctctatt
      541 gctgtcgggt ttttgttcca tgttagacct tagctagaaa catatgaaga gatgaaggtg
      601 ctggcaagcg actaaaaggc tgcactggca caaatgagac tttctgatgc ttttcacact
      661 tcactctgga tttttacagg gaaaaagtgg aggagacttg ataaactgag tctggagagc
      721 caacaggcct ggaggtcatt tggtgcttct aacttttttt gagtgtttaa aactgtaaag
      781 caaaacaatt tttttttaac
//
LOCUS       KCKM01001320             917 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20887apa ultra-conserved element locus
            uce-6546, sequence.
ACCESSION   KCKM01001320
VERSION     KCKM01001320.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 917)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 917)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..917
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20887apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>917
                     /note="ultra-conserved element locus uce-6546"
BASE COUNT          237 a          195 c          243 g          242 t
ORIGIN      
        1 tgatacgtaa gcaccgttca cataagcgaa catgcccccc caaagagcct gtgtaaagga
       61 cctgttgaca gccttgagag cagaaccttg ttcactggag gtgatgtcta tgtctgtaag
      121 tgtaaaggac tcagcttgac tctcagattc ctgtattcaa cactttgatc taaagctttt
      181 agtgggagag aatagacagg taatgctgta gctgtaggag tgctacatcc cagctattct
      241 accatgtcat tttcctcttg tctctgacca tcccttcctg ctcattgttc tccatgctca
      301 ggagaggaga cagaatagtg cattatatca cagaggcctc tagaagggaa acagctgctc
      361 ccttctgatt tttctcctga actgccccgc agataactaa tggcagctca gttgcttcta
      421 ttagctattt acctaaaact gagctggcta atgaaaatgt ttctaattaa tacgaggcag
      481 attaaaactc attacagcaa ggtcgtcagt aatgagagat aatcagagca caaatgacca
      541 agcttggagc aaaatgaaga tggaacacag gcaggtgatt ggtgctggtc atgcatgcac
      601 cagccagcaa gggcaaggtt cagcaaggtg actgctggtg gctctgggct gtgattgagc
      661 aacactgctt cgtcctctcc agagcacctt gggaagggac tggctgaaga gatggacctc
      721 agcccagtgt aaatgtttcc tgaaccaagt ggcgtctcag actgggggtt tgttgctagg
      781 ccacccctta gtcacctgta gggattgtta ggagcgtggg agtatgcgta gcataggtgg
      841 ggggtcaatg ttagtgtgtg tttgtgtatg gaaattcaga gtcctgatgg cgaggagagt
      901 gggaacttgg ctgtctg
//
LOCUS       KCKM01001321             688 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20902apa ultra-conserved element locus
            uce-1230, sequence.
ACCESSION   KCKM01001321
VERSION     KCKM01001321.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 688)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 688)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..688
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20902apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>688
                     /note="ultra-conserved element locus uce-1230"
BASE COUNT          172 a          141 c          165 g          210 t
ORIGIN      
        1 ccacctccgc cgggagcgag cgccgcggct gttgcggaaa agccatggga ggcgagacct
       61 cggcacctgt tcagctgaaa tcaagggctt acagtatact gggcagcctg gcttggtggt
      121 aggagcgaac gaaaaggaag gagacgcgag cgaggaaaaa gtgagagagg attggagcga
      181 ctgccgaaaa aaaaaaataa aaaccccaag gaagataact gggaaggaaa aggattttca
      241 tggcgcaggc tgcagagcta agcaagaaga ctgaaggttg catctctgct cttacagtct
      301 ctaactgtct aggtccagat aatgagagat tgtgttgagg atgctgctgc tgctcccctg
      361 ttcactgtgg aagccatctc caaattagcc attacatatg gaaactggag accagaattt
      421 tagaaaaagg gattaaggcg tctcgttttg gggggggttc tctctttatt tgtttggttt
      481 ttcttggttc ttttctctct tctttttttt ttactttttc ctttttcctt tttttatatt
      541 acaaccagaa cgtttccgat ttaaaaggca agcctcttcc cgtgtggtct ttctaattta
      601 cactcttttc cgtgggcttt cttacctccc ttttttgata tctctctcta tatatatacc
      661 cattatatta ttagtcggag ttattatt
//
LOCUS       KCKM01001322             817 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20918apa ultra-conserved element locus
            uce-3759, sequence.
ACCESSION   KCKM01001322
VERSION     KCKM01001322.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 817)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 817)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..817
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20918apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>817
                     /note="ultra-conserved element locus uce-3759"
BASE COUNT          296 a          144 c          138 g          239 t
ORIGIN      
        1 ttgggataat ctggccctat gagataattc ttctccaact aaaaagcctt attaatatta
       61 ttttcacaat acaaaactct aaaatgaact agtttcaaat aacaagcgaa acttatttac
      121 agaaacgtgg gatcaataga actacataat actgtttgca aaaagccctc agaagtaaaa
      181 ataaataact cagaagtcac attcctcaaa ttccctttta attccaaagt acaacagaaa
      241 ggcattatga aaaaaacagt atttcccttc tttcattaac tcatctgtaa ctgcactgaa
      301 ttcaataaca ttcctctgct attctaagct tgaaaggcat gcgcggggta aagtgttatg
      361 ttggtataaa gcacaatgcc agactgatgt gctggacaaa agtgatcaaa gttgaagtaa
      421 ttttagccaa cgcacaagta ttctgctgca ttattctacc agaatgacat ctgttgagca
      481 actcgtcgca gaataaacga gttgttatag acgggcttgg tcgggtagag gaccacgtaa
      541 gacttattag agtaatgttt gattaaacaa actgcttgag ttaagatcat aactggattt
      601 ggagttcgtg ccaaagcagc cctctttcaa acaacaagcc acaatcaatt attcaagata
      661 aaataagctt gcttttaaat aactatttaa ttttaggcgt gtttgataat tagaacagta
      721 ttaatagagc agactgcaaa agttttaaag actaggaata ttgaccaagc gaaaacagaa
      781 agccatttct tcgttaattg acttaattgc agtttaa
//
LOCUS       KCKM01001323             835 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20932apa ultra-conserved element locus
            uce-6411, sequence.
ACCESSION   KCKM01001323
VERSION     KCKM01001323.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 835)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 835)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..835
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20932apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>835
                     /note="ultra-conserved element locus uce-6411"
BASE COUNT          229 a          178 c          180 g          248 t
ORIGIN      
        1 cctcccctcg caccgccaaa atccaaatat aaaactgctt tcccctccaa ccctgtcata
       61 ttgtccgact taagtccctt gttaaggcat atttagtgaa tagttctcag agttaagcct
      121 tgcagggaaa tgctgcaaca gacctcagaa attcccagcg tgtggccaaa acacccattt
      181 tctgagtgca tgaaactggg ttttagggtt tatacttgtg ctgttgcaac caaattaagt
      241 catgaaggag ggcaatacaa tgtaccatca ttctgaagta atttaatcac gaaaactaaa
      301 aatttggaag caaacagata ttttacttaa tagaaaccat ctgcactgta cagtaggcaa
      361 attgtataaa aatgaataaa actgtctctg gaggaaaatg actcaggcac cagcttatat
      421 aatgaagatg tatatgtgcc ttttagcatt tgcattgtct attagactag gtaaatcgca
      481 gcactagtgt aagtgaagca gttacaaatt ttattaccat catatgactg atgacaaagg
      541 caggaataga agtcgtggct gttagagggg gctcattcca gaccctgagg agctttgtaa
      601 agctctgctt cactgtgatg ttttgggcag gttttcccag agaaaccttt tccctcgttt
      661 gggcttttcc tcgcttgaat caggcccgat ggggggaaaa ctcatttagg attatcctac
      721 tgggttttta tttggcagag ccgggcgggt gatctttaaa ctggtctgct gtcccgtttt
      781 ttgccacgga gatgtcctcc ttgctgctgg cacatcgctt tttcccctgc tgctg
//
LOCUS       KCKM01001324             400 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20947apa ultra-conserved element locus
            uce-7960, sequence.
ACCESSION   KCKM01001324
VERSION     KCKM01001324.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 400)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 400)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20947apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>400
                     /note="ultra-conserved element locus uce-7960"
BASE COUNT          138 a           55 c          111 g           96 t
ORIGIN      
        1 gaaggaaaaa aaaggaatat ggtgagagtg aaggctactt gaacatctgc taacctctca
       61 gagagaggaa ctgaaattct ttaatcaaga ggtgctggag aaggtggccc gatgcaagtc
      121 ttgagctgct ggcagagaca cagttaacat tgtaaacggt tgaacttcag catggcactt
      181 ctccaaatga gttgactgtt gaaaataaaa tgttccagaa gaactgggag aacaggaaag
      241 aagttaaaat agcatggttt gtatgccagt gctgaaagaa gaaaaagggg gaggaaggga
      301 gatagctcaa cttatgataa ttgtcttgtt ggttgtagtg aaaaggcttt agtagaggtt
      361 tccacatgag gggactatac tgaatagaat gcagtcttca
//
LOCUS       KCKM01001325            1083 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20962apa ultra-conserved element locus
            uce-3528, sequence.
ACCESSION   KCKM01001325
VERSION     KCKM01001325.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1083)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1083)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1083
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20962apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1083
                     /note="ultra-conserved element locus uce-3528"
BASE COUNT          350 a          208 c          209 g          316 t
ORIGIN      
        1 gagctgtgtt cagttttcaa aaaattaaaa atctttctca aaaatttctt tcttatgata
       61 cttgttatct aattctagca acaaggggcc agtcgatact tatttataga tagctactga
      121 attggttggc atgtcaggag tgcttaacta gtacataggt taattaatct agttccgaca
      181 attaatacgg ccggttgctt aaaatggttg gatttaactt gtgtgcctgg gaacatgtac
      241 tagggcttta aagtttaatt tgtagcatca gtctcaaatt ttacaacctg tcataattaa
      301 ttcaatcccc tgcactttga aatctccaca ataataagaa ctttatcagg ctgccgtcgg
      361 tatgaagtag cacagcaaac cgaaatccca ccgggagcag tctagagccc tctcttctaa
      421 gcagcaaaaa gctgttatca ttttctgaat tacaggaact ataaaaggac actctactca
      481 agctgccgct gaatgtcacc tgaaaagcaa tcacaaaagg gctctgtctt ggcttatctc
      541 tgagctctgt cactacggca accagcaggg aataagtatc tgtgggtcta tgaatttaag
      601 aatcccataa aagccagggc taaaaaggca tgtgcagcct ctcaaagatt gactgcatta
      661 atacattagc aaatactgtg aaacactgga taaatgtcag caattatgga aaaagcatct
      721 aataacgata ttcgttgtct gtcaaacccc cgtgaggttt gatatgtaac tgccactcaa
      781 agctctctgt aattttatct cttttataca tctgaatcca catcattcaa atttgtactt
      841 cgaaagtaat aaaagtgtaa aagcaggatg ttctgtgctg gtcgcaactg tcaacaaaca
      901 caggtaaagg acagaaatgc tcccactgaa aatgccaaca attttgacca actgtatcag
      961 gtaggggttg attaaaaatg gaaacgctac tggaggtttc atctacaagc agcgttatta
     1021 agcaaagact ggagagggct gaacattgat ttgattattg atttaatgta tttggaagca
     1081 gca
//
LOCUS       KCKM01001326             508 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20976apa ultra-conserved element locus
            uce-7772, sequence.
ACCESSION   KCKM01001326
VERSION     KCKM01001326.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 508)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 508)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20976apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>508
                     /note="ultra-conserved element locus uce-7772"
BASE COUNT          183 a           96 c           65 g          164 t
ORIGIN      
        1 atatccttat ccatggtaat caatgaaaat atctcaaatt caagtgtaca actaaaacta
       61 aacctctgaa aaaatctctc ctttaaagaa tacataaagc tctcatacag aattctttta
      121 aactcctcta tacttatatg tcagtgtctc tcacctgaca ataccactag cttttttctt
      181 atgcatagca gaacatgtca tattttatag tacccatttt ataaataaat tggcattttc
      241 catcccgttt gtgtttatct tcagcttcac aaagaaacca gtaaataaaa ctgtcaagga
      301 cagtcacaac aaaatgatct cacagcaaga tataaaactt gaagatacta aaagatgctt
      361 ctactctatt ttacataaaa agacagattt aaaaagtgca aggcaagatt tgcaggggaa
      421 ggggaatatt tgtttgttat ttttaggcac atccacttct ttaaagcaag cttcagaatg
      481 aaattccagt ttgttcttca tatgatac
//
LOCUS       KCKM01001327             904 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 20991apa ultra-conserved element locus
            uce-4345, sequence.
ACCESSION   KCKM01001327
VERSION     KCKM01001327.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 904)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 904)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..904
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20991apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>904
                     /note="ultra-conserved element locus uce-4345"
BASE COUNT          267 a          156 c          182 g          299 t
ORIGIN      
        1 acttcacaga gatttctaat gacctaacat tatggtgttt tgcgtagtcc actaatgaaa
       61 ctcacatctt tcaagggaat cttggaggtg ttttcgcagg gcggtactat agcataccac
      121 gtccaagtcg gtggggcaag cagctctgct ttcttcactg ttttcctggc tggatatttg
      181 cttagtaagt tcagtgaagc tgtaatagaa agttaagacc acagattaaa taagttacca
      241 tttaccttat ctcaacagct cccctctatc cagggccatg tttcttcctt ttttttattc
      301 cttccctgta agggttaaca attgaggcct gtctatagct catttctata gtaacagcaa
      361 gacggagact tttttatggg cacctaataa ttagaaagtg ctagaaggta taacaatata
      421 atgaatcaaa actgatagac ttgtgggttt ccatagaaac atgtataatt atgataatcg
      481 gtccctggcg taccctcaga atcgtataca ttcagttaaa tgcaataaac attaggcact
      541 atttagtgag ctgtgatgca gattaacagt atgagataca gggaggctat gaataaaatt
      601 gctgtacagt ttatctcaaa ctaatttccc agatagcttt aatagacatg ctatgtggat
      661 gtgaagaatt gaaagtgtat ttttgttagt ggtaaagcta acaaaggtaa tattttataa
      721 agtggctgac tgttaatttt gatgcagatc agaatgtaca gtggtacaat attgcattgg
      781 agatcactaa atccactgag aaaatgacat ggtggagttc aactaagtta ttctttgagt
      841 atgatatggg gatactcatg ttgcttgtgt tatccttgtc tcactggttc atttctctct
      901 ttcc
//
LOCUS       KCKM01001328             374 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21007apa ultra-conserved element locus
            uce-6707, sequence.
ACCESSION   KCKM01001328
VERSION     KCKM01001328.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 374)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 374)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21007apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>374
                     /note="ultra-conserved element locus uce-6707"
BASE COUNT          140 a           62 c           80 g           92 t
ORIGIN      
        1 aaaaaaaaaa ggtttgagca actaaaaggt agaaaatagc cagagagaat tatgaccaaa
       61 tgccacatat taaaaagttc tccatatgtg gcacagaaag aaacagtcaa ttcactgcaa
      121 ttgtctgctt aacaggttga gcctctatcc aactggtagc aatcaggcag gacactagag
      181 taggcaggaa atctaaaatt aggttttact acctataatg gaggatttat gggataattt
      241 aattggcagt cttgggactg aaatccaagg tgggggaaca aaaacatctt tctggatata
      301 ctcgatgaac ccttcctgta gcgggctgaa aaataaaagt actggggaaa taacctgaag
      361 atataatatt ccct
//
LOCUS       KCKM01001329             253 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21022apa ultra-conserved element locus
            uce-7128, sequence.
ACCESSION   KCKM01001329
VERSION     KCKM01001329.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 253)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 253)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21022apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>253
                     /note="ultra-conserved element locus uce-7128"
BASE COUNT           95 a           35 c           29 g           94 t
ORIGIN      
        1 tttactgtca ttattcaaac cgtgaataga agtgaatatc ctctaagtta tgaatgtaat
       61 caattttgag tctttaattg taattttttt tccataaaaa tcttttaatt tagtctaata
      121 taatggcaca tcaagcagta atgggtacat taaattgaat catgatgttc atatacacat
      181 tttatgacac aatcaaatat cccaatgcat taattcatgt caatcagtta ataaaatcaa
      241 ataggaaaca ttt
//
LOCUS       KCKM01001330             515 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21037apa ultra-conserved element locus
            uce-6164, sequence.
ACCESSION   KCKM01001330
VERSION     KCKM01001330.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 515)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 515)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21037apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>515
                     /note="ultra-conserved element locus uce-6164"
BASE COUNT          165 a          115 c          100 g          135 t
ORIGIN      
        1 gagagtgaca ataacttttt ttgacttcat cagctgaaat gtagaacagg atggctgtac
       61 aagcaaacag ggacactgaa accgggcatc tgaagcctcc cgtgtcctta cccaaagtgc
      121 aaactttgcc gtcatctata aatcaagcag tttatgaggc tgcaatattt acactctaat
      181 taaaaaatca taaagccaga ccctttcggt ttgtaaaaag aagagctcag gatctgttac
      241 tgaaacgtgg cgttaatcag taactcctaa tgatctgctc cacagcctta gaggttacgt
      301 gcttattcag ctacacataa cgaacaagat aatcaaagtg ggagaagtga aaggaacacg
      361 ttacagcaaa cgcagggctt tgctatcact aggacctatt cccgatccct cacatcgcat
      421 tttgttttct catttccaaa agccaacagg tttataacgt aaagctttga taacacgtta
      481 catacagaat gatcccgaga tgttttccac gtgcg
//
LOCUS       KCKM01001331             809 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21052apa ultra-conserved element locus
            uce-4184, sequence.
ACCESSION   KCKM01001331
VERSION     KCKM01001331.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 809)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 809)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..809
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21052apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>809
                     /note="ultra-conserved element locus uce-4184"
BASE COUNT          249 a          170 c          136 g          254 t
ORIGIN      
        1 tttgtaaagc ttcttttaaa accttacaaa aatcaatgtg tgctcagtta atgcatacgg
       61 ataaatttga gtattaaacc aatagacaaa cacacatttc aagctaatga aacaatgaag
      121 gaacagcagg gttaaaccat cctcaccaaa cggttcttgt ctggacatca actgaggata
      181 gaatcctact ttttacaatg tctcatcttc ttaatttaaa attttacact gtctatgtct
      241 tatcttttaa ttactggaaa taactgatgg aggacagagc agcacgaaga gttgcaccac
      301 ttgtttttga acataaaatg ccagtacctt aaattccagc tccattcctg tgacattctc
      361 gcctgtttct atctgtgtca gcttctggat atatgcatac aggtttctgg ctggcacttc
      421 cgtatttcca catgtcactg cttccagcag tgcatcatgg ataaagatgt attggtcctc
      481 agtttgaacc atgtaattcc tctgcgctct cattagagtt acgtggccat aaatatctac
      541 agtcttttca tgctttattc tctccaacat ggcatctatc acaatgaaac agccagtcct
      601 gccgactcca gcactaaaat aaatgaacac aggagggaag acatgaggga ctatttcatg
      661 cattgcgctt acttctatgg cattcaagtt ttaaagtttc ataacaatga tttttacagc
      721 acattttttt gaatataaac attgtctgtg aaagaggtgg tgccctgaaa taagtaaact
      781 ccgttaacac cagttacaac caattgaga
//
LOCUS       KCKM01001332            1100 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21068apa ultra-conserved element locus
            uce-1257, sequence.
ACCESSION   KCKM01001332
VERSION     KCKM01001332.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1100)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1100)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1100
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21068apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1100
                     /note="ultra-conserved element locus uce-1257"
BASE COUNT          312 a          248 c          254 g          286 t
ORIGIN      
        1 ataacctttc agcttcgtgt taagctttgg gcaggctctg taaacttggt acctgaggtg
       61 ggtcgactgc cacgaactcc taaaaatccc ccccagcagg tctccgtgtg gcagcgcgga
      121 ctggggggca gcggtctagt ggcccagctg gtcgctgaca ctatagaaaa cccagagcct
      181 ggcagaattc cctcccggca cgaggttgca aagagcagaa aggagcggag gttaaatttt
      241 gggaaggtga gctcggtgcc atgccgctct cccggctggg acgggaccac tgggaaagcc
      301 ctggctaccc cacagggaac ccgcaggctg gaggccccgt cctgccctac ccacgaaccg
      361 tttgactgtg gagacgccgg tgttattgtc agcttcaaga gttaaatatt ccaggaggaa
      421 tttgttactg cacagcgata cataatgcct gaaaaccccc tgcaccaata ttgctctcaa
      481 attggcagca agtgaacaag ggacatgaag gatgcttcag cacagtaacc tatccttcct
      541 tctctcttgg gagccacttg gccagctttc atcctcataa ttataataaa tttgacattt
      601 catagataat attgatttct gtattttagc atttcaccat aggtgacagt ctagcgtcaa
      661 gaatgaaatt tctattgatc tccagcgcat taatctctca tgtgtatgtg atcattttta
      721 taagaccttt tactgcacat aaatcaatat ttcatatttc cagctatgcc agaggagatg
      781 tcatatttgt aaactgtgag ttgacacctg caattccttc ctgttcagct tcaactgttc
      841 agtaacagtc gattcagggt tgggaaagga tcaagctcca gaaacaagca agatgaaaaa
      901 gcggcatgta gaatacagta attagcttaa tgaacaaagc agcagagtaa gtggaataaa
      961 gctatgtttc ttctgcttac acttgcctca tgaatgcaaa catctttagg gaggtttgct
     1021 aaccgactga taacgcattt taatatgttt agaggaacat tatagcataa atgtaggaag
     1081 aaaatagaag cagtcagaaa
//
LOCUS       KCKM01001333            1046 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21084apa ultra-conserved element locus
            uce-5293, sequence.
ACCESSION   KCKM01001333
VERSION     KCKM01001333.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1046)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1046)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1046
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21084apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1046
                     /note="ultra-conserved element locus uce-5293"
BASE COUNT          293 a          214 c          164 g          375 t
ORIGIN      
        1 ggggctcaac tgttcttcaa gcctcattag gttcatcata tcagaataat tccggtctgg
       61 tgttcttcct tggaagtcat cttcttgcct gacatgctga cgagtgttca tgttttgctg
      121 ttgatttctt tcctgtgggt ttgtctcact gagtttccta gccagatcaa aacactggtt
      181 ccttaagcac tccaaactgc tgagacacac ctcttcatca ctctcctcca ccattttttc
      241 tgtaagtcca ttgttcacag gcttccctag cattacaaag ttcatattcc tattgtcttg
      301 ctgtgaagta ttgtctgcat aatttctgtc attaatgttt tctgaaagca ctacaccatg
      361 tccttgtgct aataatttaa gggagtccac tgtttcccta acaacatcac tgtctaaatc
      421 taaactcagc tcacttttcc gaccaatatt ttcatttttg tcactatcat cttccagact
      481 attggatgta ttgctgttca tttctgattc tgtcctggct ctgtatgctg catcctctgc
      541 aattttgcca agatttaaca atgacttggc caccagttca tcgtaattat catactcatc
      601 attattgtta tcgtcttttt ctgtgtcttg cattattcga gtattgtgac aattcatttg
      661 atggtcttct gcataaaaaa cagaaacaaa gaaagaaaca aagaaagaaa aaggaaaaga
      721 aaagaaaaaa gtggctacaa ttggaactgt tgttgcaatc gcacggacag aaaacaaact
      781 gcatgtcaaa tattgttaat catacagcaa ttcgataaca ctaaggccca tgtgaagtga
      841 atttctctat agtccataag gctatttttg tttatttcct attcacatgt atttttttca
      901 cagaaccgat aagaaaaagg caatcaaaat gctaattatt actgttccta aatattttgg
      961 cataaatact tatgtttctc ctttcacttc tagatttaca gttttatggg gtttattgta
     1021 attttgttac taatatgaca aaattg
//
LOCUS       KCKM01001334             886 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21099apa ultra-conserved element locus
            uce-6826, sequence.
ACCESSION   KCKM01001334
VERSION     KCKM01001334.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 886)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 886)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..886
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21099apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>886
                     /note="ultra-conserved element locus uce-6826"
BASE COUNT          238 a          214 c          185 g          249 t
ORIGIN      
        1 ccctgagtct tcatctatat aaggctcagt aattccaatt tcagtgaata tctctcaaac
       61 aaaatatgtc ctaaaattag agaagttgct tatccaagaa ggaagtaact agcctgtgtc
      121 accaacataa ataacctcat ctttccacag ctccagaaat aaccaacctc tgccaattgc
      181 cacggcctaa gcagagcctt ctaagctgcc ctcggtttcg gtcccagcca taatttgctc
      241 atcgtctcgc acttacctag gattttgcta atgttggagt tgtgcatgtc ggggaaggct
      301 tggagaattt ttcgacgctc atcctttgcc caaaccatga aagcattcat tggtcgtttg
      361 atgtgcggtt cgctactggc tcggccccgc gaatcccggt agactcgtgc ttcagccaca
      421 gtggcacctc ctgttggcca acaataatac tgctgtagtt tagctgcaga gccattcatt
      481 gctttactgc ctggagcgtc agggcaggaa gaaacaagat ggatgcaaaa cattattacg
      541 tggattacac aagcgctttc cgtgctgtgt ttagttcagt ctcgttcttt ttctctctct
      601 ctttgtgctg ctacatctat gagagagaga agatacactg agttcagtgt aatgggccgg
      661 gctgaagcca tcaacctctc tgagccaaga agcaaattgc accgatgttt ctccagttaa
      721 ggtatggaga tccgcaaaaa tttccatttg ggacttgaac atggcatacg tgttctgaat
      781 gctcaacaaa actcaaatta gagttacact tgagaatcca aactgatgta gacctgttca
      841 cacaagtaat ttacaacaac tttgctgctt gagccgtgaa gcacat
//
LOCUS       KCKM01001335             890 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21115apa ultra-conserved element locus
            uce-3917, sequence.
ACCESSION   KCKM01001335
VERSION     KCKM01001335.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 890)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 890)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..890
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21115apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>890
                     /note="ultra-conserved element locus uce-3917"
BASE COUNT          271 a          192 c          196 g          231 t
ORIGIN      
        1 agtcatgttc attacatatg ttgataggta tgaagcaaag tctctgtagg cccttcaaaa
       61 attgcacacg gacgatttaa tgcaaaccag aagtcactga ctgctggatg aacattcggc
      121 ttcattccca cgtggatatt aagacaaagc ggggggaggg ggcttcctcc tcgtttattt
      181 acagttaaag ggcgggtctt gaggaatgag caggaggcca gcgaaggatg gatttggttt
      241 atgggaagac acctcccagc ctcccattct ccagccaccg cagcaaaagc gcctgggttg
      301 tgtgtaacct cctcccccat ctcgcatctg ccttgcccaa tctcgtctgg gcccgctcca
      361 ataacaacat ctgcttggca gcttttcaaa cccatggata gttatctaac tgaggctttt
      421 gtgctgcact gtttattcta tgtgaagaaa tgcctcctta gttgaaagag tactttagaa
      481 aagctgtgca gctattagca agtgaagcac aaggctaata acccccacct gctcatcaga
      541 ttaattatga catctgagtc attataactc agaaagaaca cacgactgca gacttgtcac
      601 atgtagaaat aaacacactc tgtgttaggg gaggaaaaga gacagcaaaa aggtccagaa
      661 taaaaacatc taactctgaa catttcagat attgaaaatg tgctttttta acttcccaaa
      721 ggcagaaact aaaggagaga agctaagggt ggacaaaatt ttcctgaaga acacatctgt
      781 acacctctgt atgggttttg tgaaggaaag gagaagaaaa ccttattagc acagtgatct
      841 tcacagcacg actgtaaatc agaatgtttt ttcgtgagaa atcttgtttc
//
LOCUS       KCKM01001336             531 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21131apa ultra-conserved element locus
            uce-1937, sequence.
ACCESSION   KCKM01001336
VERSION     KCKM01001336.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 531)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 531)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21131apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>531
                     /note="ultra-conserved element locus uce-1937"
BASE COUNT          153 a          101 c          100 g          177 t
ORIGIN      
        1 actggattag taacaatatt caacaaaatg ctgcctgcat tctcttatgg ctttcattac
       61 caaattgaaa atctgtgtag atttctgaaa attactttta aatgtagcca atctcctcga
      121 ctgcaaggct tgatttgctg gtgagggagc cctgctgtga gattttaatg aaagatcata
      181 gtgcccctcc aagaccgtca aagagctatg ggccctaaaa gacctgaaat aatctgtttt
      241 acttttaatg gcagccattt tatattcatt aagatcaaaa tgcagttttg caggcaaatt
      301 gcaaagctgt tccactcaca gcttgagaac ctggaggccc tacagctttt tatcttgttc
      361 ataagcaaat atgcagttaa tatcttttaa tatgctttga tgcttggtac cttatgggta
      421 cattgtactg gaggttagag aactgcatgt ttctttggca gtgctagcaa cgaactaaag
      481 cactagtcct tttatttcca taatggcaca agaaatgagt cttttttctt t
//
LOCUS       KCKM01001337             925 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21146apa ultra-conserved element locus
            uce-7084, sequence.
ACCESSION   KCKM01001337
VERSION     KCKM01001337.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 925)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 925)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..925
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21146apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>925
                     /note="ultra-conserved element locus uce-7084"
BASE COUNT          312 a          162 c          180 g          271 t
ORIGIN      
        1 tcacaaacga ggcaaatgtc ttaatgctaa gcagtctcta gcagatttga aagttaaatt
       61 caaccggcat ttatctcccc atcaatggga aggatctatc ctattaccta tcactaccac
      121 tgacaagaat tggtcctgta aatcttcaaa gagaagcaga tccacctaaa acttttcaca
      181 tcgcctctga tcccagcaat actgaattgt atgacaacag ttatagggag aatactgtat
      241 atctcaagga aaataattgg tatactgaaa gacagtcaaa tagataattt aaaaaagaag
      301 caaataatct ttcataccac agagttaaga agaccttgcc cctggatttg tttgcagtgc
      361 tttgcttaag gtttaattct attgattaca cattccattt tccaaagcgc catttgcctg
      421 aaggagcagg tggtgtttgc tgtttccatt taactgatat attagccatg tggtgcactg
      481 catcagtggg cagtattaat caatttacgg caagatgaca gagagaatca ctcacagcaa
      541 aattgcaagg gggaaaaaaa ggacaaaagc aggaaaataa tgaccactaa tggggaactt
      601 gaaaacgggg gttgtggggg aaataaatct gtgcttttaa tacttctttt tcgtagcaaa
      661 tggaattgaa agagtttaag aacagacagt gtttgaaagg agagaaatat cactacgttc
      721 agtggagtac tttttgtaag cactctactg tttggcattg tgtgatgaat acacagtcaa
      781 agatatcaga tacttgctga gaaacttaaa tttcccttcc ttaaatgaaa tctaaataca
      841 agatcacagc tgacacaggt cttcttggaa gatttgtaaa gtttctacct gtgagaacca
      901 tttttgtgct atattatttt ctata
//
LOCUS       KCKM01001338             960 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21161apa ultra-conserved element locus
            uce-6177, sequence.
ACCESSION   KCKM01001338
VERSION     KCKM01001338.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 960)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 960)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..960
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21161apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>960
                     /note="ultra-conserved element locus uce-6177"
BASE COUNT          307 a          159 c          191 g          303 t
ORIGIN      
        1 gcccttataa attgtgaaga gaaatcttga agagcagaaa ttgaaacaga tgtaaagaca
       61 ttccctaatt ctgtagcctg tcactgatct gatttgaacc caattgctac caggtactgc
      121 ttcacaaatt tataaatgtt agataagaat gccaccaaat aaaattgaaa ggagaagaaa
      181 ctaaatgttg cttatcttct caaaggactt gagatcttgt acaacttcat tacaaaagtg
      241 aattttccat caaacagacc tttatgttaa tccggaaaag tttctttagt ggagatgccc
      301 accatttgga gcaaaaccac tccagagtga ttatgccacc ttattgctta gatatcctca
      361 tatatttctt gttattctag ttgagtacta cgttcagaca gaggttgcca ataaagttta
      421 ttgtaggagc taagtgtcaa tatctgtagt accccccgcc tagggtgctt gtaattaaaa
      481 tgccacagat agtctgggag aagcatgaaa atttgatggc aaattgattt caggttcatc
      541 ttgaaatttg tcctcagctg gactcaatac tgctggcaga cattggatgg cttttgtcaa
      601 aagggtttgc tgggatgaga cagagatgcc ttggtctgaa tattaaatac agtgctctgc
      661 ttatgacagt ttgcttactg ctaacgtgtt ccattttata tacattttat tttgtgggga
      721 atgtttaggg tggtatcact ccattttact taagaaaata tgttgcttaa aaatatttta
      781 gcacactgaa gagcagattt acaatattaa ctttaaacct taacgcagct tcagaacttc
      841 tgaatttgat tgatattcct caaattaagc tgagctgcac aaagaaaagg aacgtgataa
      901 ggtggtaagt aaaatttgtg tcagtgatgg tactggagga gggaaattcc atgtaaataa
//
LOCUS       KCKM01001339             841 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21190apa ultra-conserved element locus
            uce-3086, sequence.
ACCESSION   KCKM01001339
VERSION     KCKM01001339.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 841)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 841)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..841
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21190apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>841
                     /note="ultra-conserved element locus uce-3086"
BASE COUNT          225 a          151 c          205 g          260 t
ORIGIN      
        1 tgccactggg gtgatttaga aatcgttcct ctgcaacagc tgccaagctt tggaggtgtc
       61 caggtaggac ctgggcggtt acgttttctg agggttggct gaagttccgc agtttggtgc
      121 gatgcaatgg gtgtcaacag aaaggatgcg tttcctctca tgtcctaaac ttccctgact
      181 ttttgtgtag ctgatgttcc tccaaagagg gtccagcctt cccaccaacc tctgagaaga
      241 ggccccataa gtaatattaa cttctgcaat ttccttgtta ctcttgagca agttattaat
      301 taactgaatg taaccactgg ctgttgataa atccttttaa ctaattcaga ttccatatca
      361 agcctggagt gttttcactc aagctgctgc taagctttag gaagaattag ttttatgagt
      421 gctggagatg gggggaaaat ggagagaaga tatttgtttg cttgattcca catgacaact
      481 ccagggtaac tgaatagact gtacggttgg tttgacaagg ctgtgcaccg agccagcagc
      541 ctcacatacc agagacaggg ggatggaagg ggcactgaca accgtagtgg attttatcag
      601 aatctctcta aggagcgaca atttgccttc aattattaat gtttttcaga ggtttctctt
      661 ctgagaggta tgaataacta acttaaatat gtatttgtgt aacattttca ataatgaata
      721 aattactgcg tgggaaggag ttgagcagca gatccgaata ttaaataatg gaggaggttt
      781 ttgaaagtgt aggaaatgta gtctttaata gtgtgactgc tgctgttttt tctatgattg
      841 c
//
LOCUS       KCKM01001340            1053 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21206apa ultra-conserved element locus
            uce-3698, sequence.
ACCESSION   KCKM01001340
VERSION     KCKM01001340.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1053)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1053)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1053
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21206apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1053
                     /note="ultra-conserved element locus uce-3698"
BASE COUNT          191 a          255 c          248 g          359 t
ORIGIN      
        1 ctgggctgcc gctgcctccc accttgcccg gttagggtgc aagaaaactc tcagccgtca
       61 aaccacctgt gaatcccttg tgtcctctgt ctcgtctctc atggtctcgg tctccgtggg
      121 cacacgttag ccctggagtc gatctcctgg ggaaggagct cgctctgttc tcctcctgag
      181 cagagctgct gggggcgcgg ggcgaggtgc acgcacgctg ctcgcaggct gggtgccgag
      241 agggaagccc aggcctctgc ttccagtcgg tttccggcag tttggtgttt gctcggtgtc
      301 cttcccgtcc ttcgcctttc actcgtgcat cgccggcatg tgctgccctt ccctgtcgcc
      361 ccccttcccc aggagatgtg gtcgtgcagt gcccattcgt gttctctctc tctgtgtttg
      421 gatgtactgc tctgtgtaac tcagtgggtc tccctctttc tggtttgttt tttttctaga
      481 ttcctgccgt ttgttcatcg ttgtgcctaa agcatgtcga tgtggcgttc aagtacatcg
      541 tccaaatcct tgtctcttca gcttctctga tgcttgaact ctcacctttg accttgtgtt
      601 gacctttgat gctgatgtgt atttttatta cgtttgtttc tttttttttt ttgtgctgcc
      661 aaattggttt tgctagaaag actgctgaag gggaatattt aaacttgcat ttgaatataa
      721 aagaatttct atttttctag accttcctaa gataaccact tgattttgtg aatctgattc
      781 tttgtaattg tcttcagagc agccttgcta gcataccttg tggagtattt gtatttctgt
      841 gaacatacag ccaatcactt tctaggctta tgtgtgctta gttttaaaaa cacagtttca
      901 aagaaaaagg caattatatg gtgtgactca atcttgcagg agacttccta gtcacatttt
      961 gctgatctgg tttctgtgct tgaggagaca gcatgttttt atgagttcaa acttgtgact
     1021 tgagtggcat cagtggaaaa cacttgaact aca
//
LOCUS       KCKM01001341             988 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21221apa ultra-conserved element locus
            uce-2417, sequence.
ACCESSION   KCKM01001341
VERSION     KCKM01001341.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 988)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 988)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..988
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21221apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>988
                     /note="ultra-conserved element locus uce-2417"
BASE COUNT          294 a          203 c          232 g          259 t
ORIGIN      
        1 ggtgctgaaa gtgtacgcat gtgtgaataa atgtctatac ctgttatata ttttcaagag
       61 aatagaggaa tgtttctttt ggaataatga acagaggact agttgatggc ggaacccgaa
      121 aattctcccc aaccccttgc aaaaccaagc actgtctgta ttgcattctg gcaaataata
      181 agcattaatg ccctttaaca atgtgtgctt gaagaaaaag gatggatgga ctgagggagg
      241 ggaggtttgt aaatattgcc cacaaatcat tcagtgcttc tttcacagca cagtattaaa
      301 gccagactaa attagcagtc cacttccccc gctctccttc ctgctcaagt catgtctgtt
      361 taccctcggt aatgacaaaa cgtagacaac tgtctgcgag tactgtggtg acattggcac
      421 acacatacca gacaagcaga atgttgtggg aaacagagac tgaagcatct tgatatacga
      481 gaaacaatta tcatgggaat tgttgtttct caatgcaaca gctataataa atagttgcca
      541 tatgctaagc acagatgcct ccttgaaaag cagccctgag atggcacagc ccatgttctc
      601 cagggtctgg ggctttgagg aaatgattgg ctttttgcaa gcagagctgc tgccccaagg
      661 aaaggtatct caggccacag aagagcttag ggggaaaaga aaaggctcag taacagcttt
      721 gtattttgct ggtgggtttt gcaggggaat ctgaagccga tctcaccagt caggtgagca
      781 aaactgggac gactcctgct aatgtggatt tcacctctgc ttccttctca aaacaggata
      841 acacggcaca gaaaaacttg ctagggaaga agttctagtt gcccacttta cacacatatc
      901 agaactccaa gagaatttgg tgcactgcag ggggctcagg ctttgtttga tttcaggact
      961 tatgggtgga atgcttcata tacatata
//
LOCUS       KCKM01001342            1003 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21236apa ultra-conserved element locus
            uce-2538, sequence.
ACCESSION   KCKM01001342
VERSION     KCKM01001342.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1003)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1003)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1003
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21236apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1003
                     /note="ultra-conserved element locus uce-2538"
BASE COUNT          268 a          242 c          216 g          277 t
ORIGIN      
        1 atctacatgt ccattttact acatcataaa aatagtgcca agctaggaaa ttcatgtcat
       61 caacgaaacc taaagagcta ttaagaacta cttaatgaca accataaaat gctgtttatc
      121 tgtgtttacc ttgctgtggt ctcaagagca ttacagcatc caactgccca aactattaac
      181 cctcttcctt cttccatcta gtagtaaaaa ttacatccat taccactaac acaaaaagaa
      241 aatctatgtg ctagaatagt agaaataagt tctacaaaag caatctgagg agttttattg
      301 tatccggata cgcttatgga caacttcagc aatccatttt ctgccatgca cacacacgtg
      361 ttagtttaat actgttatta ttacttgcct gttgcagtcc cactgtcgct ctgcagcagt
      421 gctcctgtca ctggttgtgc gttgtttggg tttgctcctg gtgctgttgg gggaggaggc
      481 cctgctccac ccccaaggag catacaggat ggcggagggg gctgcccacg tttcagtaac
      541 actttgtggt cctgctggca acggaatcgc ggcggcacct cccgaggcat gtagcgggcg
      601 gcgcttggcg gttgtccgtt cggcactgcc acccttttgg cattgttgcc accattgact
      661 ggtggcgatg gagagttgcc aattgggctg gcagccactg gttggcttaa acttggtttc
      721 gtcacttcgg gcactgaaaa acaggaagaa cgaaaatcag aaaattttcc actaaaacct
      781 ctgctagcta caagaactcg ctgtgactct ttataatttc acgattccct gaagtactgt
      841 gcaacttcta ccttatcaaa gaacaagagg caggaagaag ccgcagtggt aaatttcttg
      901 gttccatgtg caattctgta acccaggatg aaactctgcc ctcagcaagt attttgccct
      961 aagccccaaa tttcttgtca atgtacggct ggcaaagaat acc
//
LOCUS       KCKM01001343             201 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21252apa ultra-conserved element locus
            uce-4334, sequence.
ACCESSION   KCKM01001343
VERSION     KCKM01001343.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 201)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 201)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21252apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>201
                     /note="ultra-conserved element locus uce-4334"
BASE COUNT           71 a           40 c           39 g           51 t
ORIGIN      
        1 cagccactac ttaccgcagc ttgaggccct cccaggaggc taaattatta tcaaaggatt
       61 agggagatgt agccttgcag ctctgacatt tctgattact tgtctatgcc agaacactaa
      121 ttagctgtga ctaattaaga aaaatgttcc tgccatagaa aaccatttaa aagaactgag
      181 aagtagaaaa gcaattgaaa a
//
LOCUS       KCKM01001344            1019 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21268apa ultra-conserved element locus
            uce-1366, sequence.
ACCESSION   KCKM01001344
VERSION     KCKM01001344.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1019)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1019)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1019
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21268apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1019
                     /note="ultra-conserved element locus uce-1366"
BASE COUNT          339 a          187 c          197 g          296 t
ORIGIN      
        1 agatgtaaaa agagaaatag tgaagggcta aagagtaggg tagaattaca actagcaatg
       61 aaagaaatcc agtgtgcccc ctcttaagta gcaatatatt tagccaagct caaacaatgt
      121 aaattaatat aaaatacatc ataaatttct aaaataaaga tacatgcttc tgtgcctacg
      181 aatatcgatt atctcttttt gttgttaagt gcagacttaa tttctaatgt tgccattgtg
      241 ctcacgtgcg tgggcacgca cgggagcgaa tttccccacc agtgtacatt ttccagagga
      301 agctgttgct tttgctacag taattgttac aagaaaagca tcagaaattt tgagataaca
      361 tattgtttct ccataacagc ttcaaacttt tacccagatg cttggttttc ttctgcttta
      421 tagcagaaca aactccccat ttttcataag acctgatgta tattgtgctt ttgactagtc
      481 cataactcag actaaagcat acaggcactt ttctacactc tgttttctca tgaaagagag
      541 aaccttgcaa gccgcagcac cagagcgaga aagaggtaga gacaatttat gattcagtga
      601 cataggcaga aggtgtgatt tatagtttaa tttgctgtcg taatggacag aggataataa
      661 catgtaaaat attaatcaat gtgtagcaac agcagacatc atttgctaag cttgttatct
      721 gctgctctac ccctgacagt gaacaattaa actgacacca gaaaaacaag agaaaatgca
      781 tgaggcaatg ccagggcaaa aaaagcagaa gcatcccaag gccactgaaa attaacaaat
      841 aaagacactg agatattttt ataatttatc ttaggatcca agatcgtact atttcagagc
      901 attccctttg tttccaaggc agacgtcttc ctgaaggtta ctaattttgc agcaaggtgt
      961 taggatgatg ttaaggtatg aagctgtggc tggcatttgc atactgcaac gatctgttt
//
LOCUS       KCKM01001345            1011 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21283apa ultra-conserved element locus
            uce-3065, sequence.
ACCESSION   KCKM01001345
VERSION     KCKM01001345.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1011)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1011)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1011
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21283apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1011
                     /note="ultra-conserved element locus uce-3065"
BASE COUNT          308 a          181 c          228 g          294 t
ORIGIN      
        1 ggcctcactg tagtcacttc catgatttta gagttgtgcc agagaagcct agagactggc
       61 gtggacatgt ttgtgtagaa atttggtaga attaatttta acttagatta tctactctag
      121 atttggaatt gggattccag ttatgaaagc ttatctgtgg caacttaaac cctaaaaaga
      181 tttagtcacc tgcatttaat ttactacatg aactttgact tccatgctaa ataaagagat
      241 ggtgcttcaa gattgttttc ctggctcata cacaagaagt tctttacaag tagtggagtg
      301 tttgcagttt cttctcctct ttgtgttttg ctgtctgcta aatgtacctt ggtggaaact
      361 gctgtcacta aaaccacctt acctattgca cccaaagtat aatgcttttt gaggttgctg
      421 ctcccatcaa tctgctcagt aaaaatagct catcttggta agttgtttcg acttcaccag
      481 gacctgaaga agaggcagaa aaacctgtga aaactaagac tgtttcttcc agtaatggag
      541 gagaaagttc gagtcgcagc gcagagaaac gggcagctaa tgaagaagct gaagacttca
      601 ccacaaagcc tgctcctgcc aaaatgtcca agtttggatt ttccataggc agtcagacag
      661 caaagaaggc aactgcaata tccatcaaac taggagcaaa tgtaagtttt ttaagagctt
      721 tgaattttag ggaaagtgag gaggcaaagg ggggaagtac ttcggggagg ttgccttgca
      781 gaaggaaagc cttgaattac ttgaggatat cctcggtaaa gtttaagaaa gcattaagca
      841 cttcaaagtg attaatacca ggtcagttat gtccggaagc ataaaacttg actgaagtga
      901 actgtagatc tttgaacatg cagaatagtt ttgccaggag atttgataag actggaataa
      961 tttcctgagg gaaatgagca gccttttaaa actcttcagg ctgctttgag a
//
LOCUS       KCKM01001346             812 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21299apa ultra-conserved element locus
            uce-7797, sequence.
ACCESSION   KCKM01001346
VERSION     KCKM01001346.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 812)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 812)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..812
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21299apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>812
                     /note="ultra-conserved element locus uce-7797"
BASE COUNT          258 a          128 c          140 g          286 t
ORIGIN      
        1 ttttgtagca ttaataacca ggagaagcca ttaaaagcca ctggttattt tatttttcat
       61 cgggcagttt tgaaaatttt tatttgttct gtattgattt tttacactgt ggtacatata
      121 tgcaacttta tttaatagct tataaatgta cagtagttag ccttcatcta ccttgttccg
      181 tatacacttt tccactttac gcttgatgat cttcagaaaa atgctttttg aattgtatca
      241 aatttatgtc tactgtaaac cttgcttaac ttttttttcc ttgattaaaa aagttgggtt
      301 aaaaaaatgc tattgaacat tgcaatctat atagcgtaat ggatggcttc tttcatcaga
      361 ctgatcttct atgttaccaa tgtggattat caccttttcc ctaaagtgta cttaatcttt
      421 gctttctttg cacaatgtct ttggttgcaa gtcataagcc tgaggcaaat aaaattccag
      481 taattttgaa gaatgtggtg ttggtgcttt tctaataaag agctagttta gctcaataga
      541 tgcggccttg tgttatgagt tccccaaaaa cctctttata gtagggacga gagggctgga
      601 atatctcctg cagggaggtc cactgtggtc tgttctgtaa aaaaagaagt cactcaatta
      661 ccgtagaagt atcttcagag acagagagga gataggcaat acatgttaaa ataacaataa
      721 taaaattgaa gtaacaaaat aatacgttga agtaaaagtg cagttcatca cctaattaca
      781 attaaagtca ttaagcaata aaataaaaat ct
//
LOCUS       KCKM01001347             884 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21314apa ultra-conserved element locus
            uce-888, sequence.
ACCESSION   KCKM01001347
VERSION     KCKM01001347.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 884)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 884)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..884
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21314apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>884
                     /note="ultra-conserved element locus uce-888"
BASE COUNT          247 a          189 c          193 g          255 t
ORIGIN      
        1 gggagagaga tgggggcaaa taaccttttt gacaaaaaga aaaggaaaca gggaaacttt
       61 taactctgaa agaattaggg tgcaggacta atgtttagac tcattttaaa tgtttgagct
      121 tttctagctg caagaaagag gaaatggtat ttaagaaact ccacatttaa ttaaatgaca
      181 atgtttgggt tttcatttag ttcacattac aggaggaatt tagacttcca ctgctaccac
      241 ctgctgccag gctgagctgt gaatgttgtt cctgcatctc accgatgcag gtgaacttac
      301 tgctgaacca ctttcacagt ccagaaagca tgacattcct tgttaccagt gggaggaaag
      361 gctaattgag aagtatgtat aaaaagctgt aatgagtagc atttacatgt attgattaga
      421 agtagggcca ccgtctctca tttatcacca ccagcagctg tgaaattttc cccacgtcga
      481 ttggcacggc tcgtattccc gctcctctgg ttctttattg ctttttccga ccctgtacca
      541 gagtgctgat ccactggctg gaatgggctg gtaattgctc cagcttctcc accagctgcc
      601 acaattgcca aaccactgga gtgaaaaatt ccatcctgca tttctgattt tttttacatt
      661 accactgcat aatcatattt gacgaataat taacctgggt taatgcttca gggagccatt
      721 tgcaagtaaa ttgataagct gagtaaaggt gcacaagggc taaaggcttt aggaagcagc
      781 acacaacagc cccctgactg tgctcttttc acctcctgac catcttaatt aagagtggac
      841 tgtgggtgct gtcctccagc ctccttaaac ggagtgtggt tcag
//
LOCUS       KCKM01001348             443 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21330apa ultra-conserved element locus
            uce-29, sequence.
ACCESSION   KCKM01001348
VERSION     KCKM01001348.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 443)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 443)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21330apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>443
                     /note="ultra-conserved element locus uce-29"
BASE COUNT          108 a          109 c          113 g          113 t
ORIGIN      
        1 gatttgctat caccgtaact cgatctgtta tctcccaaat agtttcaact gcgttaatgt
       61 gtgcgtgtac tccccttctt tccccttatc agcctctcgg cagcatttgt gattcatagc
      121 agtcatcaaa gtgataataa actcattcac aatactaaca aacacggggc tcccagttat
      181 ttacgaggca aattcgctgc agtgctgggc agtggaacag gggagaatca agatggtgtt
      241 gattgataaa ttgacaggtt aatttacaag tggataatag gagttagacc cagcgggagc
      301 ggctgccggc ccctgctcta gcttggttgc agtgccatct gtctggggcc cgggaagctg
      361 caggagcaga acccggagct gccgaaacgc aaagacaaaa gatgctcttg ccggcgattt
      421 tcggctgtgt gcgccctcct gcc
//
LOCUS       KCKM01001349             531 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21345apa ultra-conserved element locus
            uce-575, sequence.
ACCESSION   KCKM01001349
VERSION     KCKM01001349.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 531)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 531)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21345apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>531
                     /note="ultra-conserved element locus uce-575"
BASE COUNT          178 a           83 c           91 g          179 t
ORIGIN      
        1 agaacgcctg ggtttaaatg gcatagcaga gacaacagta gccatggaag tgacataacc
       61 tcaaacccgt gtcgcggcct gtgctaacgg tgtcgtcatt tctgttccaa ccgaatgcaa
      121 aatgcagcac tctgtggatc acagagaact gaaatggacc taaatggact atcattatat
      181 cgtgtattaa gtcgatatat aatgtaaatt ttgtaaaatt gggaaaatca ctaccttgta
      241 aaatagttta tttgtatcat caatattatt tctgttactt gaatagtaga tattcatcat
      301 catgcttttg cacttgaatt tgcaactgaa tggattaaaa aataattctt taatgggatc
      361 atgagcatga aatgggatcc tgcatcactt gttttaacta tttattttgc catgtttaca
      421 ttttgtatct tgtacaaata aatccaactt tgtgtctaaa aaaaagttaa agattcatag
      481 ctaggaaaca aaattcttgt aatttttttc taaagaaatg taaagttttc a
//
LOCUS       KCKM01001350             859 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21361apa ultra-conserved element locus
            uce-7996, sequence.
ACCESSION   KCKM01001350
VERSION     KCKM01001350.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 859)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 859)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..859
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21361apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>859
                     /note="ultra-conserved element locus uce-7996"
BASE COUNT          244 a          179 c          190 g          246 t
ORIGIN      
        1 gctaaagaaa aatgcttatt actaatacta catgttagca tatgtgtgta ttatgtgtac
       61 aaatatattt ttgtttctct ttctgaaatc tcctttgaaa ttcaagagat cttttatttt
      121 ttttgagttg attttttttt aatgctgtag tagcagaagc ccatagtgtt gttgagagct
      181 ttgtccttat ttctcagatg cactgggaat tgtttttaat ctcctttctg ctttcccatt
      241 acagatggtg atgacgaccc acaactctcc tgggtggctt catctccctc cagcaaagat
      301 gttgcatcac ccactcagat gataggagat gggtgtgatc tcggcatcgg ggaggaggaa
      361 ggggggactg gcctgccgta tccctgtcag ttttgcgata agtccttcat tcgcctgagc
      421 taccttaaaa ggcacgagca gatccacagt gacaaactac ctttcaaatg cacctattgt
      481 agccggcttt ttaagcacaa gagaagtagg gatcgccaca taaagcttca cacgggggat
      541 aaaaagtacc attgccatga atgcgaggct gcgttctctc gcagcgacca cctcaaaatt
      601 cacctgaaaa cccacagctc cagcaaacca ttcaagtgta ctgtgtgtaa acgtgggttt
      661 tcatctacca gctcattgca gagtcacatg caagctcata aaaagaacaa ggaacatatg
      721 gcaaagactg agaaagaggt gaagaaggat gattttatgt gtgattactg tgaagagaca
      781 ttcagtcaga ctgaagattt ggagaagcac gtaatgacac gccacccaca gctttctgag
      841 aaggcagatt tgcagtgta
//
LOCUS       KCKM01001351            1065 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21377apa ultra-conserved element locus
            uce-5024, sequence.
ACCESSION   KCKM01001351
VERSION     KCKM01001351.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1065)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1065)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1065
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21377apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1065
                     /note="ultra-conserved element locus uce-5024"
BASE COUNT          303 a          190 c          209 g          363 t
ORIGIN      
        1 tttggtttag atttatgtgg cttaatgatg ttttattaaa agattagaat attgtacaca
       61 gttgtcttca gcagcacgaa tactggaaca agatatggtt tcatcagttc atctgtagca
      121 gttttctggg tttgaggtaa catttgtgtg tatggagctg ggaggcaata gaccttttgg
      181 ttaggttgtt tgtgtttagc tgtttggttg ttttttttct ccagactcct ctcctgctat
      241 ctagttgcag tctaatttcg attgtattca ctctgctata gaaatactta atgtcaggaa
      301 ggagatattt actggaacac gcgagtccag aattcatcat gattcagtgt gaaatccgct
      361 cgccctttgc tccccacccc ctcttgaatt ggaatgaaat gtgccttaaa ctgaagtgaa
      421 atacatcaca tgcagcaaca gtgggccctt gcttcgcctc tattcctggt gtgaaatcga
      481 tacactatct ttcctcctga cctgttctgt gacctccatt gcagctttca tgctgaacag
      541 caattgcttt gaacagtccg ggtctgccac agctcacaaa tgattctcag cttctgtcta
      601 aaactggtgc tgataacaaa gccttgattt taaataatgg aatcgtagtc atcttctaat
      661 tatgaattgc atgaaagtgc atggtcttct attattaaac attttcaata gcatgtacag
      721 tatgtatgca gccagaataa ttcctcactg agaagacaca ggagttctct tcctaaatat
      781 atctgataaa gtttatgttg ttatggaaga ggagaaatgt agcaaacact tcagaagact
      841 attcgtgcta tttttaagtg gaagaatttt tcctttgacg ttatcactgg ctaatatggt
      901 gcgattattt tttacaaaca tttgaatttt caaaggaaaa attatattgg atgatgtgta
      961 cattcaaagg aaggggactg ttgttgaact aagatgtttt aaagctgttg caaaactaag
     1021 caaaatcaaa tcctttgctt aaaaagaaaa aacattctgc attcc
//
LOCUS       KCKM01001352             854 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21407apa ultra-conserved element locus
            uce-7586, sequence.
ACCESSION   KCKM01001352
VERSION     KCKM01001352.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 854)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 854)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..854
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21407apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>854
                     /note="ultra-conserved element locus uce-7586"
BASE COUNT          265 a          141 c          212 g          236 t
ORIGIN      
        1 tccctttgca aacaccaagt tttaaaattg aactgcctag cctaatcaat gtgctggatg
       61 aatgaaaaag catttcagct tgtgagggat aagacttcat gcaagtaagg gatgacacgg
      121 gttaaaattc accttgcttc tcactcctca tctacgatgg gtttttggag aatgacggac
      181 atctggaaat cagttttaca tagaaaaata gaaaacaggg aagaactagg aagatgaata
      241 aaggctcatc acagacacaa aagaccagag caaaaagaag cttggatttg ggtattcttg
      301 tctggcaagg aggcaggcag taaggctaat gaagcatttg cgatatggga cgtatgccag
      361 cgtaacaaag aagatgtgca tcagctctgc agatgtgcca aagcccccag agcaaaataa
      421 tgacataatc accatcagtg tcacagacca gactgtacac aaggtgacat gggagagaat
      481 aaataagagt ctttagaggc ctgtagtaca cacacgggaa ggaatagcca ttcctcacaa
      541 ctgccacaag agagtggcga gatgttgggt ataatgtgtg cagctaggaa aagaaatctt
      601 gaattgtgca aggctaaagc actataaatc ggtgcttttc tcgatctccg gttgacgttt
      661 caattcccac tactccttgt tgaatgcaaa atgaaatggc agtaggagtc ggaagagttt
      721 gccaagtttt gttttgtttt gtttttgttg gtttcttgtg ggttttttca tttttttttt
      781 tgtctgtttt ggaagggggt tgttttgttt gagatgagga tggggcaata aggatgagta
      841 tcagtaaata attg
//
LOCUS       KCKM01001353             710 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21422apa ultra-conserved element locus
            uce-3696, sequence.
ACCESSION   KCKM01001353
VERSION     KCKM01001353.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 710)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 710)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..710
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21422apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>710
                     /note="ultra-conserved element locus uce-3696"
BASE COUNT          198 a          129 c          152 g          231 t
ORIGIN      
        1 cctttgaaca atgctttttc tttactttat gaaacagatt agcttgctaa agatctgatc
       61 attaaaagtt tggattgttt ctctcttaaa tcagattccc ctcctatatt tttacaatac
      121 ttcctttaga aattaattgt tccgtggtta tttgttcaag aatctccccc acgtgaaaaa
      181 caaaatctca gtagatgtgg attttacact gcactagatc aatcccaata ccagtaaatg
      241 gatattatta aacagcatgg ggtagtgcaa actgggaaag aaaacttgta gtgtgctgcc
      301 tttgagcaga cctggcttgc atgctgtgac agggcaattg tcgacatgct ttttcatgcc
      361 aatctgcagc tttttcaact ctagatgcta tggcaaccag ggtttaacag actaagcagc
      421 taacaagctt ccctgatgga attgtctggt tgtatgattg ccttgtctta gcgaaaatat
      481 aaaatagact gaagacgctt gtggacattt gtcaaactga ttataatttg gtcactcagc
      541 tcataattat ctgctctata ttgcgtagta ttgaccggca gtgttttctg tgctggctgt
      601 tgagaacacg agtgcctttc tgtacgggaa agaatgggct ttggttgggc tgagttggtc
      661 aacatggcag gtgagattat gtggatatag gaaaaagtgc tactagcaga
//
LOCUS       KCKM01001354             301 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21437apa ultra-conserved element locus
            uce-2498, sequence.
ACCESSION   KCKM01001354
VERSION     KCKM01001354.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 301)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 301)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21437apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>301
                     /note="ultra-conserved element locus uce-2498"
BASE COUNT           86 a           58 c           91 g           66 t
ORIGIN      
        1 ggggacggcg agcgctcggg ctgaatagcg ctgtctgcag aacaatggca gccaagctcc
       61 aaatccagct ataatcacat taatgagatt aatcagcgaa ttagcagcag tcaaatgtca
      121 gggtggcaag aaggaatcca gccaagctcg gtaattaact tttgggggac agggaaagga
      181 agccgactgt gttatctgtt taggcttttc ccgaagttta ccaggtttta tgcaccagct
      241 tttggaagat gttgacaatt caggtggagg ggggaggagg ggataagacg gagacctcaa
      301 c
//
LOCUS       KCKM01001355             868 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21451apa ultra-conserved element locus
            uce-418, sequence.
ACCESSION   KCKM01001355
VERSION     KCKM01001355.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 868)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 868)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..868
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21451apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>868
                     /note="ultra-conserved element locus uce-418"
BASE COUNT          273 a          182 c          155 g          258 t
ORIGIN      
        1 tgcttctagt taatattagc ttttgagatt ttgagccaaa ctccaacaaa accccatttg
       61 tctgctttat agtaggtctt ttaaaaggga gccataactg atggattaca acatgtttct
      121 accttttcaa tctgaatttc ataagaataa aataaaccac aaacgaaagt gcttgtacca
      181 ggcacgttga acctttcttc ttctattagc atatcagtct gcaatcataa ctagatcaat
      241 agcaaagata tctgcttaaa agagcaccat gctttctttt gtcagaaatt cattactttt
      301 tattagggtc attgcttgaa aacttcaaaa caccatatgg acctaattgt ggtttatttt
      361 ggcaaaaagg aagacactgt agaacaattg aggcattaca ttctacaatt ccattacttt
      421 catccctctc cgttttatta ctgtgtcatt aaaggcaact tgagtgagcg aagaattata
      481 gtgtcatgtg tatgggctag tagattaata acaaaacaca ctcaagttta aaggtatcta
      541 acagctgttt tcattatttt gtgtaaatac gcttgaagca tatctatctg attagtggat
      601 agagtgctct tctctgtcac atgccatggg cactgctatg tgcaagtaat caaagtgctc
      661 agaaaatgag tttacattgc tcactgctga aatacacaaa tgtcagaaag tgactgcgca
      721 tcaaagctcc ggcaaatcat ctgccgcaaa caaacaaggc tccgacgcac gctgcggctc
      781 gaaatgttcc ctccgcagcg ccacaggact tattgcttca gcccaaacga cgggacgctc
      841 gcagaataat aaggcaccga caagttca
//
LOCUS       KCKM01001356             991 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21467apa ultra-conserved element locus
            uce-188, sequence.
ACCESSION   KCKM01001356
VERSION     KCKM01001356.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 991)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 991)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..991
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21467apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>991
                     /note="ultra-conserved element locus uce-188"
BASE COUNT          315 a          205 c          171 g          300 t
ORIGIN      
        1 ttttttgtgg agaaattatg cttcggtgta tttccacata acagtatatt tttaaacctc
       61 tctactgatc tcatggagat ttaattaaga aagcccagat aaactaacag caaagcttcc
      121 tgaacctccg cagaaaactt ttaggagata atggttaact gtgattcttt caatcatagg
      181 gccaactatc aatttttaac ccttgaaact cttaatagcg atattttgtt ctgcgtgtaa
      241 aatgaatggc taggctttgt aacaggtaat agtgctaagt tatgaatgct gatggccttc
      301 ttgtacagcc ttaaattaca ttgaaaaaga tacagtttct ttaattaaaa aagctgcact
      361 gaactaatcc ctctagctga aaaaagaaaa gttttaagca atctctttct gctctgggag
      421 agaaaagcag acaataccat aacagatcag aaacataagc tatagtgtgc agccaggagc
      481 acagcaggga actgaatact gctccgactg tgtcattttt taatccccca tcccagtttt
      541 ccccgtctga cctcatgctg agatgaagtt atcacagaag acagctttac tctcaccaat
      601 gaatccaacc ctggatctgt attatcctca gcagatcaaa acaccgcttt catcaaatag
      661 cattatctgc ataaaaggca tgcaattgcc cgataatttc acccaaacta tgctattcat
      721 ttaaaggaca agaagagaaa tgtaattcat tccttttttc cccctggaaa agctaagtta
      781 tacttcactc atgggaactt ttcttttttt aacacaagat ctcaagaaga ggtccattaa
      841 aagtttcccc ctggtttaca attaattgtt agagtacccc tgtgccgctt gagtgacata
      901 agtgaagtta tgcagaaatc tggcagggag aattcacaaa gcttgctgta gccatgatac
      961 tgatttcatt agccatggtt ctgctaacct t
//
LOCUS       KCKM01001357             580 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21482apa ultra-conserved element locus
            uce-1485, sequence.
ACCESSION   KCKM01001357
VERSION     KCKM01001357.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 580)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 580)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21482apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>580
                     /note="ultra-conserved element locus uce-1485"
BASE COUNT          185 a           87 c          122 g          186 t
ORIGIN      
        1 tctctagagt gttttagtca ttttactttt gttagaaatg gcaaattgtg gttatatatt
       61 ttaggtgttt gcaagaaatt attctgaacg cttcaagttc cctgcaattt tcaagacagc
      121 cagcaactag tattctacaa gagctttgca tgggtataag tcgtgttgtg caagagtttt
      181 tgttcccgtt gcaggtggag gaggaaaggg aatgtatgtg cgtatgtgtg tgaaggtata
      241 tagatacctc cttcgtagta atgttgtgag gaatcctcat aaggcctatc gtagccttgt
      301 tcaggatacg acggttgctg ataaccgtaa tcattatgac ctacatcaat tcgacaagag
      361 acaggaagaa acgttaatgg cctctgagtg aaaaccctaa aagtatttca tttctcagaa
      421 aaatgaaaaa aatgtcaact ggatatacat gaaaaagaat tttcaattgt attagccaaa
      481 gacttattaa tatgatttcc tttcatattg aattaacatg tgacaggaaa aaaatgctta
      541 atgcagtagt tttagcaata tcacagcaaa ggatggtctt
//
LOCUS       KCKM01001358            1063 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21498apa ultra-conserved element locus
            uce-5136, sequence.
ACCESSION   KCKM01001358
VERSION     KCKM01001358.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1063)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1063)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1063
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21498apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1063
                     /note="ultra-conserved element locus uce-5136"
BASE COUNT          286 a          239 c          291 g          247 t
ORIGIN      
        1 tgtctgggga ggagggaagg tgcgcgcggt gagatgtgtg ttattcgcac atccttgcta
       61 gcagcaaaca atgtcatgtc cctacctggg ctgcaacgtg acatacacct gaaaaacaac
      121 agcgacaacg agctgcagag ccacaggaga aggcagagct gctctttttg atcgtcggtt
      181 aggaaatcct gccagcccca gcaaagcatg ccgggatccc aactggcttt tggatgggga
      241 ctcggggagt gaaagagaag cagtaatttg tttgccgttg ccctcaagcc aggaaatcca
      301 aaccccaagc atttcccagg ccgcagcaca tcggagtcga aagagagcgt cagcgaatcg
      361 ctcacacgta gaggcaggaa cacgcacgcc ggaggacgtt aggaagggag aattgttcca
      421 gcaccactgc ggttaagacg ctgagacaat ctcgagtttt caggccatag ctgtcaggat
      481 gctttggtat attcatcacc ccccactcca tggtgataaa aatttacaca gccaacgaaa
      541 cgaagattaa tttcatgtga aaagctgaca gaatggccca tgtcattgct ttatttgtgc
      601 cagcactcag taactcggcg caagttccat tgaggtggca gacaccccgt ccccttgagc
      661 catctcttct cctctctaat gatgccaccg ttttgacaaa accaagcaac acagccggta
      721 tgtgcgaatt tggaattaat tttcctcaga aaggtcaagt atgttaatga gcttctggct
      781 gcttgtgttt tctttcttgt gtttttcccc tgttaatggg gggaaaaaat gggggagaaa
      841 caattgcaga aataaaaagg aaggaaggag gaaaaggagg agactgcggg cgtttggaag
      901 gggcaggatt cagtgtagtt ttacctcctt ttccaggact gaggcagatt aattgtatca
      961 gtgcaagtct gtgcagtttg cttgaagctg ctgagcgagg ccagagatgt catggatagc
     1021 agagttggtg taacctggca cggaggaggt gaattgcacc tcc
//
LOCUS       KCKM01001359            1127 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21514apa ultra-conserved element locus
            uce-538, sequence.
ACCESSION   KCKM01001359
VERSION     KCKM01001359.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1127)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1127)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1127
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21514apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1127
                     /note="ultra-conserved element locus uce-538"
BASE COUNT          359 a          231 c          203 g          334 t
ORIGIN      
        1 gagaggaaaa gtgtccctgt gatcacttcc tcaaatcaaa tagctagggc tgcaaatttg
       61 cacaattgta aaatgtatat gaacaaaggc ttaactgagg cagtataaat gcaattacac
      121 catgacattt tattcagaaa gctctctcaa agcagttaca agtagctatt ttttaactga
      181 ggcccaaaat aacatttaag ataatgacca agcatacatt gtggaagaaa cagcattagt
      241 gtcatttaaa caaaaagaaa agtttgcaga gagcgtttta aacatggatt aaaacccctc
      301 aaacttctca atacaaattt ctcaagcttt caacactgat atacggacag gattttttgc
      361 ttttttcaaa ataacagcac aaacaataga aaagacagaa acttattaat agtacaagtt
      421 gcttaaacat caacgggttc agaatagtgt gaaaaagttg ttaaacttac tttatttttg
      481 tttccaaaac ttatatgttt ctcctccctt gtgtgctgaa ctgtgcacta aagctgtgtc
      541 tttgaaaggt agttcccatg atatgacatc cagtgccttt gactgcctag agataagcac
      601 ctgcgtttgt gtcccctctt tacgtcacac ctccctattc aaaccttctc aatatgattc
      661 acatttgcac atcaacagcc tcatgcgcat acacagattt ttttcggctc tgggcccaaa
      721 actttcactt taattttcat cacatgattg ctgtggcata tgtccttcca aacctcccat
      781 atatcagtca tcatgcaaat gagatggaat atcactcctc tgcagcagat ggccagggat
      841 gataacaatg gctcaacaga ggagattcaa tgtccctgac tttatcgcca cggcaacaac
      901 aacctaaaat atatgtaatg gaagtggtgc ttattaattt tgcaggctcg agtgttctga
      961 ttttgtgagt gaatgggctg agttaaaaag ggggctgtgt cctcctgcct ctagaagact
     1021 atctataaaa gccagggacc tggaaattat tttcagtgac taagaaggca acagcctagc
     1081 aattatttga gtaattaggt gtaattcctc cctgtaggcc ttgtacc
//
LOCUS       KCKM01001360             709 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21530apa ultra-conserved element locus
            uce-6574, sequence.
ACCESSION   KCKM01001360
VERSION     KCKM01001360.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 709)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 709)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21530apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>709
                     /note="ultra-conserved element locus uce-6574"
BASE COUNT          227 a          138 c          129 g          215 t
ORIGIN      
        1 aataaatata aaagcttttc atgtgtattc ctattttcag tcccaataca gtgcgttaac
       61 ctcagaatat caaattgaat caggagttct gagaagagct ggctccaaag cagttagaat
      121 gacactcttc attacactat ctagattcag gtttcagaca accataacca gtgctttcac
      181 aacctctcac ctaaagtcgg ataatgtacc caaataagtg actgaatttc cctgcagacg
      241 tttctgaacc tctcaaaatg tggagtccat ggaggccctg aaaactgaga ctaaaattgt
      301 tatgaagaga ctttactgga tgaaattttt ccttcccagg cacaaataaa cagctctcaa
      361 tagggtgctc accacacagt gtgtcagcac atattatgca gtctggtgct gagtggatgt
      421 gtcagctgcc cattagacca cactaaaata gaattgctgg gagcctgaag catgaagcat
      481 gatattagat aaagtgatga aatttcactc gattaaagag ccaggtcaag gacagttacc
      541 tcaggaaatt ccttttttcc tagaatattc tcacaagttt gataaattta tcctactttt
      601 ctgcttattt ttgattatca ttcaaattat atgaatggtt gtatttacac ttgctggctt
      661 ccaacatatt gaggacgatg ggaacagtag atttttatta tgtaaaaaa
//
LOCUS       KCKM01001361             732 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21545apa ultra-conserved element locus
            uce-4088, sequence.
ACCESSION   KCKM01001361
VERSION     KCKM01001361.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 732)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 732)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21545apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>732
                     /note="ultra-conserved element locus uce-4088"
BASE COUNT          202 a          128 c          146 g          256 t
ORIGIN      
        1 ctcctgaaag ttgtggcgga aagccaaaca ggcaaaactt gattcttgtt acttaattta
       61 gagacttata tttaaatata ttttcttcta atcatttgta gtgagagatt taccctggaa
      121 gagccccaaa agcttcatgt gaaacatgca cagttatttc tgttagtgct caggctttat
      181 ttcagacagt ttttttttgc attgctctag ccatgcagcg atctgtaaag ggaacctact
      241 ctgatacagt ttgaaaagtg cattttgtac ttggctctcc ctttgatcga attaatctgg
      301 gcttttttgt agttctaaat gaggcctatg ggctgacaat gtagctgttt aaaggggatt
      361 ttaggggata atagccaatg caaatagtgc catgagaatg gcaacttgct tttgcacttt
      421 caatcacata ataacagcaa agaaagcttt taaaatgaat tgaaattttg tggcatgcca
      481 tctgggatta tttggggaaa cagttctgaa tactatggtt gtgtaaaaga atggtactat
      541 ggggcactct taagctgaca tgtttcagat ggcaccctta tgctaactgc tgcaaagttg
      601 gctagcattt tttttattat tttctttctc ctggattatc tgcaaaaaat tctctttgct
      661 ggtatttggg cctgaaaaac ttttctattg ttaaagaatt caattcaacc cccttgcagc
      721 tgctgatccc tt
//
LOCUS       KCKM01001362             590 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21561apa ultra-conserved element locus
            uce-7902, sequence.
ACCESSION   KCKM01001362
VERSION     KCKM01001362.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 590)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 590)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..590
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21561apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>590
                     /note="ultra-conserved element locus uce-7902"
BASE COUNT          176 a          112 c          108 g          194 t
ORIGIN      
        1 cataattact tcttccacca agcatgattc ttttaaataa ccttcatttt tgtcccttgg
       61 aaatgaaaag aggtttacat taaaaaggca tttcctctga ctgtctgtcc ttgagcagcg
      121 ctaaatgtaa actataccct tcccttcttc ttttgaagaa aaaggagttt caatcttctt
      181 ctgtgaacac ggtccattta aataaggaga tggagtccca tcttttcgat cagctttctt
      241 tgtttgactt gtcagtaata acactttagc tgaaattgta caggcgtcct gctaatttag
      301 taattattga cacggtgctg ggcaagaaat gatagcaaac acagggaact gttaagaaga
      361 aatgaaataa aagatcttca tatcattgtt gaataatggt cgagatcatt ttgtgctcta
      421 agtaggccca agacaccttt ttccattttc tcgacacatt tataatttat gctttgtaat
      481 agttccaaat atttttagga ctccgcactt tgtttgagaa tctggaagaa ctgaatgaga
      541 atcacgaagt gcacacacag atgagtgagc gctgtgacct gccatggctt
//
LOCUS       KCKM01001363             830 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21577apa ultra-conserved element locus
            uce-3369, sequence.
ACCESSION   KCKM01001363
VERSION     KCKM01001363.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 830)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 830)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..830
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21577apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>830
                     /note="ultra-conserved element locus uce-3369"
BASE COUNT          266 a          162 c          148 g          254 t
ORIGIN      
        1 acatatatat ataaatataa cacatgcacc aacctcgcag tgatattcaa atattgcact
       61 ttcagtagta ttagccgatt cttctgcaca agtttctaag gatgaagact gctattattg
      121 gaaaaagaaa aaaaaagaaa gagagagaaa gaacaaagaa aaaagataac aagagaaagt
      181 gatgtttcga gctaataaag aatgcaagtg ccgctgccct gggcagtttc aatacagcac
      241 tagagaaaac aaagactact agcagcgttg ggacgtgctc tcttgaagct gttgagtagg
      301 cacaaacttc ttgtttcaga tcaagccttg tatcttcagt gtaagtttcc tcttctttgg
      361 tcttgagttg ttgttacaat gtggtatact cttttcctga tctgaacttg aagcagcagt
      421 ttcaggtggt aaattctact ctgttccact tcatactgga aaaaggaaaa agttacacac
      481 taagtatcac tttaaaagta atcatacatc agtctttggt gttcctagaa acaggtgcgt
      541 ttcctctact tcagtactgt agttttgacc caccctagga aagactgttt tacagatata
      601 tttggcattc ccattttcag ttttgttttc caagaaactc tgcctacaag ccagtgatat
      661 ggtacttcca attttaaact cctcagacac agttatgcat ttcaggaaag ctcctggttt
      721 gtacaactaa aacagcaaat tcattttgat gaatcacagc atcatttaat gcaagtcttg
      781 gccctcctac caataacttt atataggtac tattgcttgc acagactttc
//
LOCUS       KCKM01001364             577 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21592apa ultra-conserved element locus
            uce-905, sequence.
ACCESSION   KCKM01001364
VERSION     KCKM01001364.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 577)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 577)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21592apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>577
                     /note="ultra-conserved element locus uce-905"
BASE COUNT          201 a           98 c          126 g          152 t
ORIGIN      
        1 actgcaggaa ggaccggatg atttttttaa ggaatagcac tatttataaa ataaatataa
       61 aatcagatct ctactttgca caagcagcaa gttatgagaa ctccagcagc tgtatattcg
      121 ttgaacaccc gcctcctgtg agtataaatt gcaccttact gagtagaaat aaaatacagt
      181 ccaccagaga ctgctgcaag gtgtagctgc ttgtccatgg acaagtaatg acttgcgttt
      241 tcagctgctc cttagtaaga gccttagtaa ttggaatcag ttattcaaaa catctctaaa
      301 tgtgatttaa atggcaagga tttaataaca tagaaagaag tcattacaga ggttcaagca
      361 ggggagaagg gaattccgtt tttcagagca gagggagaaa aataaagcaa ttacttgatg
      421 taaaggccag aaacaggact cctgctgtca cagagaaatc aaatctgtca gcaattagtg
      481 ggatcttagg agccaaagaa cccttcagtg ttgaacagtg aataaggggt tagcaattat
      541 atgaactgat aaaagtgttc tggttttcaa acagcag
//
LOCUS       KCKM01001365             744 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21608apa ultra-conserved element locus
            uce-754, sequence.
ACCESSION   KCKM01001365
VERSION     KCKM01001365.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 744)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 744)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..744
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21608apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>744
                     /note="ultra-conserved element locus uce-754"
BASE COUNT          266 a          149 c          133 g          196 t
ORIGIN      
        1 caagaaggag accagagctc agcacaagga gtatgttatc aaggccacaa actcccaaat
       61 agctttgaaa tgaagtttcc taaagtcatt aaagactaaa gtacccagag ctccttttgt
      121 tggggtcctg aattagaaag aaaagagaaa aaaaaaaaaa caaaacaaaa accccaacaa
      181 ccccccaaag ttcagagtag aaaaattaac cctgggaaaa tctggaaagc ctaagattat
      241 accagacatt catcctcaag ctgatttttt gtacaatcct gtgttgtgct caaaacaaaa
      301 atctgagaat actccttaaa gcggaaaaca aagctctgct ccagccatac atctgtgagt
      361 tttgaaacaa aggtttgttt gtgtgcctca atcactcttg cccatgaaag cagacactta
      421 cttgaaaaac ttttcaggga aacactctaa accaacatcc tggtataaat ttgcaaaatg
      481 caatacaggc ctgattgtct ttggagagga tgcaggccgc atacgaatag ctctttctga
      541 aacgtaatgt tctttgcatg gctcagtggc taatgtacaa taaatcaaca aaagagcgct
      601 tcaagaaagc tattgggcag cagcaaggcc actgttattt tatcttttta cagtatttaa
      661 ttggaaggtt tttcctgaaa ctttacccaa ccttcaaatt actagactct gtataagaag
      721 agattgataa gacgaatttt tttt
//
LOCUS       KCKM01001366             770 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21623apa ultra-conserved element locus
            uce-7548, sequence.
ACCESSION   KCKM01001366
VERSION     KCKM01001366.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 770)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 770)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..770
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21623apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>770
                     /note="ultra-conserved element locus uce-7548"
BASE COUNT          238 a          149 c          131 g          252 t
ORIGIN      
        1 gatgttctca gatactccat tttgctttcc cattggtatg gggtccagtt ttaatttctt
       61 ttggagtgaa tggcaaaact tttactacat tttagcagag tagaattagt gcgtagcttt
      121 tacaccaagc tatctgagac aaaaccacta ctaaatctct acacttgcaa acaggaaatt
      181 ctccttttca aatttatgaa attcaactct gagtttgtgg cacagatttg agactaacgt
      241 gttgtttgat ttctcttaac atgactagat ccatgaagcg tgcatgtgcg tctgtgtgtc
      301 ccctcttgta cccatttcta ttgcttttca catttctgtc aatatagtct ccaatatttg
      361 aagccactga tagaacagat gcagtaattg caaacagctg taaagtatta ctcatcttgc
      421 taatcaaaat gactttctgc taaataaacc atgaaaaaag cttttctacc atcagtgaag
      481 tggagtggaa atgatacaga ctgtaaagag tccaccatgg aagtaaaatc aacagatcaa
      541 gttttcttac aacaatgatg ctacgtgcta atgcacattt ccaaaattgt tatagaaatt
      601 tctctatgtt tagaaaaatg gatttgtgta acaacacaaa tgttcctcca ggtattttac
      661 atgatacctc cagatacaga gagcctcaca gaactgtttt atgctttctc aagattcata
      721 atccaagggg agataattgc cccatatggt tttgctagat gcgcattaca
//
LOCUS       KCKM01001367             464 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21639apa ultra-conserved element locus
            uce-2073, sequence.
ACCESSION   KCKM01001367
VERSION     KCKM01001367.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 464)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 464)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21639apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>464
                     /note="ultra-conserved element locus uce-2073"
BASE COUNT          173 a           83 c           67 g          141 t
ORIGIN      
        1 tttttacatt acctaaaact tcctttataa ttcccttcct aaaaactact ccaaaaatat
       61 acatttgtta tatcaaaata gatatcagac taaaaggggt atatatggag actactattt
      121 tgcctttttt ttagcagaaa gattgactag atattaacac aaatgggttt aaatgtgaag
      181 ctgccataaa agcaggcaca taaatgtaat tctcccagcc gctattttga tgcacatttt
      241 tgattccatg aatattttat gaaatggccc aaactaaagc catataacat tcctgcatta
      301 ctgatgcttg cgcccgtaag ctacaaacat tagaggcatg attgagtgca ttaaaatgaa
      361 ctcattcagc agtgcattga ttacttgaag gaaaaaaaaa aaaagttact cccacttaag
      421 aaaacagcac acaaatctga agttttcaat gctgaaatta aaga
//
LOCUS       KCKM01001368             698 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21653apa ultra-conserved element locus
            uce-4874, sequence.
ACCESSION   KCKM01001368
VERSION     KCKM01001368.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 698)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 698)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..698
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21653apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>698
                     /note="ultra-conserved element locus uce-4874"
BASE COUNT          230 a          114 c          128 g          226 t
ORIGIN      
        1 cacaatatct tgtttataca aaattagctc tgtgtctgac tttaacctga aggctatgta
       61 acctggacaa aatatttctg gaataagttt catttaagac agtacaacga cactgaagtt
      121 agaaacatgt ttgtgtcttt ttttcatgac tagcccatgt ctattctcta tgaaattgat
      181 gtcaaaaaag tattatatat tttcagtggg aaatagaagg ctgccctcta ctatccttgt
      241 caggacgtcg tatcccttta atcatacttt tcatttcagt acattgaaat ttccgttacc
      301 aaggacaaca tcataaataa aagtgtttgt gaaattttta cctgcagctt cctaactttg
      361 tgcattaagc atgagactag cagagaggtg gtcaaatgtg aaaatttata atcatttatt
      421 acgtacggct gaagcgagaa gggaataaaa gcgtgaaggc atacatctat aaactggagc
      481 agaaaagctt aaatgaaaag taaagtgaat ttctgtgtct tgtcataaag taatgagaag
      541 ctagagcttt attcatagca acccaagatg catttactct caatctagct ttagcagtaa
      601 atgcttccct gatgtattgc tttggactta caaagaaata tttgtgctct acataatagt
      661 atagttagga gaattactgc atggctgagg agattcta
//
LOCUS       KCKM01001369             287 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21669apa ultra-conserved element locus
            uce-1173, sequence.
ACCESSION   KCKM01001369
VERSION     KCKM01001369.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 287)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 287)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21669apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>287
                     /note="ultra-conserved element locus uce-1173"
BASE COUNT           89 a           35 c           53 g          110 t
ORIGIN      
        1 atgcatgtaa cagtgatact gtcatgtgtt aaatgaacat agcttgaagt attatttttt
       61 aaaaaattga aaggttgtgg cagtaataaa aaggttgaat ggtaatgtct ctaattgaac
      121 agtaagacct ctttcctatt aagtcactct ttcatctgtc tttttaatta tttcattatc
      181 attttgtact gcagttcaca atgaaatgac catttgtgtt taagtgaaag ctaattatta
      241 ggactgaatt attgtgcagt ttattgatcc ctatggtgga ttaaggg
//
LOCUS       KCKM01001370             291 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21684apa ultra-conserved element locus
            uce-5582, sequence.
ACCESSION   KCKM01001370
VERSION     KCKM01001370.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 291)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 291)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21684apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>291
                     /note="ultra-conserved element locus uce-5582"
BASE COUNT           83 a           54 c           55 g           99 t
ORIGIN      
        1 actgaggtac tattcacggg aaagattgtc attttgtata gctttaatgc cacttacttt
       61 tactttcata ccctttctta tttttatttt agtatgttaa cagacaattc atggcagaga
      121 ctcagttcag cagtagtgag aaggaacagg tagatgagtg gacagttgaa acggttgagg
      181 taagatcttg tgtactgcag gtaaaattgc aatccctgtt tccgctgact cccaattcat
      241 gctaggtttt agtattgcac cccttctccc ccaatattaa taaaaatata t
//
LOCUS       KCKM01001371             849 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21699apa ultra-conserved element locus
            uce-6688, sequence.
ACCESSION   KCKM01001371
VERSION     KCKM01001371.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 849)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 849)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..849
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21699apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>849
                     /note="ultra-conserved element locus uce-6688"
BASE COUNT          293 a          136 c          152 g          268 t
ORIGIN      
        1 cagcatgtta tgtttgggtg gtaagggaaa agggacatac acacataaat gtgaaaagaa
       61 ttacagaaac gttacagaag gaactctgaa aaagctagac tgaaaaatac ttagctgaag
      121 agtcatgtaa atataataca ctgggaatgc tctttataga tctgatctat tttttattag
      181 ttttgtggta ttttgtgagg cagcacattg tagtgtcatg gtaatcaagg cctgggagca
      241 ttattaccta gagtcagcaa taatgagaac agaaccttta atttcaaact ataagataac
      301 acattgatta ataaccatgg gatgattagt caatccaaga ccttaatgca caatggagaa
      361 atccgtccat tatctgttca atgcaattct tctttcatct tggtgacttt aaaacaacca
      421 aggaaaatta ctgtccctca gtaaaggctt ttgaatttca tatgcattta attagataac
      481 tgccagccca aggacaggaa ccatgacaaa tagttgttct tttcaaatta gaagaataga
      541 ctgttcaatg agcaatattg atgttctctt gtactgagtt atacaagagt tctgctacta
      601 cttcctttaa tttatctaac ctttttttta acatttaatg aggttttttt aacacggttt
      661 tagctacata tgctacttgg tcattttaaa aaatgttgct agcagcaaca gcacctgcac
      721 agacataaat gcatatccca ccacagtttt tttggaatta ggtgtgaaag cacaatttac
      781 ataggaaaaa gagcattaga aattaggagg acatctttat gttagtagaa aaacaacagt
      841 taatcctgt
//
LOCUS       KCKM01001372             958 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21714apa ultra-conserved element locus
            uce-5532, sequence.
ACCESSION   KCKM01001372
VERSION     KCKM01001372.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 958)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 958)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..958
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21714apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>958
                     /note="ultra-conserved element locus uce-5532"
BASE COUNT          289 a          197 c          171 g          301 t
ORIGIN      
        1 tttttcagca tctatgtaat aattcaatgt aaattacagg cactaaatag aaaacattac
       61 aaggaacagt cgtggtatca tatattgtaa tttcaataga tcttaaattg gggaacaaag
      121 gataatctac attttctgga ttccaagcta ctaagatcat aatgttgtaa agattttgca
      181 actactgcct aagataaaat tttaaattct aagctgcttg catttttact tcagaattca
      241 cctcattcat tgaaacatta cctcagtatc tattaagttt ttgccttgag caaggaatta
      301 ttgggctttt tgttttattt tgttttacat ttttacattt aaaagctgtc tgcttctaaa
      361 atgaagctat ttaatccctt gtcatcacat ggtcataaaa attgcaggca gacataagtt
      421 agcaatggct gcttcacagg ccccacagca atgcatggta acagattttc aaagcagttc
      481 aaagagtcca gtttccatct gtgtttggcg aagggtgcaa aaaccttggg gccatctgaa
      541 aactctgctt catctctaac acttggaata acaaaggtgt tatttttcaa agccacattc
      601 tcccctcctg gggtggctct gcagatatag ttcagggaag gtgggaaact tcagagtaga
      661 tattctcctt ctagactttg cctccttcag ggagttcttt tgaggatgtc acaatggtgg
      721 cctatataac atgggttact gccagcagag gccagcagtt aatgaaccct atagacatgt
      781 tctttcttct gatttcagta caaaaatctg caggaaaaca gcatcgatgt tcccccctac
      841 acacccttct cttcaagccc aggagtgtta tttgatcaaa agaaagtaga gggtgctcta
      901 cacccattgt acaacccaaa atcgtgcatt accacacagg tatccactac atccagct
//
LOCUS       KCKM01001373             994 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21729apa ultra-conserved element locus
            uce-6382, sequence.
ACCESSION   KCKM01001373
VERSION     KCKM01001373.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 994)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 994)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..994
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21729apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>994
                     /note="ultra-conserved element locus uce-6382"
BASE COUNT          324 a          202 c          174 g          294 t
ORIGIN      
        1 actctttgaa atctggaagc aatatcacaa atatgagatt ggttatgcat aacatgtacc
       61 ttcatattca agtttctgtg agcagacaca aacatgaaag ctcacagagt aattaaataa
      121 acggaaagaa gagcagcctg gaagattcca aacaccacat cttagttact taatcaccct
      181 gcaaacacat ttgagattac tctggtttta ttagtttcat gttaaaatgc aaatcacata
      241 ctgtagtttt aatgaaacaa taaaatagaa aataatttct ggcataaaga tgtacaaaat
      301 agattttttc ccccaaattg gcatgtccga tacatcctct gctcagtttt agttccttct
      361 ttacattgca gttcttttgg taggacgcca aagcctgtca attaacagta agcctatccc
      421 ttatgaacag aagcagggac tgtgatcatg ttcaactaag atcaaggatt agtaaatcag
      481 catggcacca gattgcaggc actatttaaa ccccacaggc ctacaagcca atgcagcaat
      541 attatattcc agctggatgt ggagaacaga acctcatagt tacagaggaa ctcacttttt
      601 acctttcctg tgcaggcaat tacaagtcaa ctcaaaatga gccctgatta aatcatgctg
      661 gctttctgaa atgtaagtta ggaaacatcc acacgctgcc actgctggta tcttatcaag
      721 gactttccat caaattaaac atatttcatt acacctacaa taaattatag aagactgttt
      781 tttcacatgc aaagtaaata ttgcaccaaa gctgacacaa aggtttcttt ttagagcttg
      841 aagagctgta atgctatctt gccccttgcc cagaacaaag ggttgtttca aggttgtttc
      901 tgccatttgc tgcagaatcg ggcacatcac acaaggtgaa acattttgtt tgcttaataa
      961 gcagagtttg agttcagggc ttgctttgct ttgc
//
LOCUS       KCKM01001374             571 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21745apa ultra-conserved element locus
            uce-737, sequence.
ACCESSION   KCKM01001374
VERSION     KCKM01001374.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 571)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 571)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..571
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21745apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>571
                     /note="ultra-conserved element locus uce-737"
BASE COUNT          219 a           90 c           81 g          181 t
ORIGIN      
        1 tgtgaaacca ggctcttaaa caatagcaag gggcttttta tgcaatacaa aaatatatta
       61 aaaatacata atgtaacttg tcttaatata cttttctgag tctaaaaata tgccagacca
      121 aaagaaacat atttacataa aaagcagaca aggtcaaata acaaagaaag cccttaatta
      181 gttgtaatca actttaattt gcataccgta tataattcct aaatgattgt taataataac
      241 tttatataat ggacttccaa ttttcatgaa aatggcacat tttgataagc agacacaaaa
      301 ccctagtact aataaggttt aatttgcata cattagactg attatccaaa caaaaggatt
      361 acagtattac ttctccatac ctttatgtcc ttattatgca catttattaa cttcacaaaa
      421 gctagctgtt agtgacaaac aatagccgtg gctggaagag aaatctacag tatgaataaa
      481 gtgcatttta atgctaagga gcaaagttta tactgcataa atgttttgtt taactcttaa
      541 aggcattatg ctttgtaagg caggcattac t
//
LOCUS       KCKM01001375             491 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21760apa ultra-conserved element locus
            uce-1318, sequence.
ACCESSION   KCKM01001375
VERSION     KCKM01001375.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 491)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 491)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21760apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>491
                     /note="ultra-conserved element locus uce-1318"
BASE COUNT          177 a           73 c           78 g          163 t
ORIGIN      
        1 ttgagtccag atacgttatc acagctacac aaggggtaga atatgcctca gtgtcttcaa
       61 gcatatttaa tatctttaaa tttttaaatg aaaatgtagc tgtcaatttt aaactaattt
      121 ggatggacag caataaaatg caaacctcac ttcaaattag aattttcagt gaggatttct
      181 aatggaaagt aattgctgac aataggaaat gacaaattac taattactta gttcaattag
      241 acttttgtgc ctttggtcct aagtggcaag catacagcaa atcttgcact tttgtaacaa
      301 ttaatgacac taaaactatt taaactgcca acagatgtga gtaagacgac atgaattgaa
      361 acttacttaa tttacatact atcccaattt tatatcgagt aaatggtgtt taaattttat
      421 gttacaatta agtatcactg gcatagagta atttctgcag aacttttcag aataaaagtt
      481 ttgctgaaaa g
//
LOCUS       KCKM01001376            1121 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21774apa ultra-conserved element locus
            uce-7546, sequence.
ACCESSION   KCKM01001376
VERSION     KCKM01001376.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1121)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1121)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1121
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21774apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1121
                     /note="ultra-conserved element locus uce-7546"
BASE COUNT          341 a          229 c          207 g          344 t
ORIGIN      
        1 caaacaaagt aatatcactg caagagcatg tctttagcct ggttgctggg gcaagtacaa
       61 aagtgtttat catcatggca ttactaaagg agccatcgct agaatctagt ttgagacagc
      121 tgaagaaaaa aaatagctct tctttcaact gggacaattt gcaagtaccc aaatcttcta
      181 ttgtttgaag ggtttatttt acgatgcaga acctatagtt actgcacccc gaaagttctt
      241 ttttatgatt agctgaagca cagacaaatc atgaaaagac aattgtacac tttcttgtgt
      301 tggtttatgg gctttaagtg cctacaaaaa aaggattcct tatgctttaa tttctcttta
      361 tttttttgac tgtaaagacc catggggtaa atgccagtcc cacaatcctg cagttatatg
      421 gttactgtca gcctgctcaa atgatgcttc ctgttcatta ggcgtccttt catctgacaa
      481 caatgtactg gctttgctgc aattcttagt caacgcccat ctcttcaata gcctgtgaat
      541 agtattaaat agtgtttatg ctagctattg ttgccttttg tgtggtttgt ctaattcaca
      601 gagaaaagtc tgcttttgtg gtctaaggct ggctacgtca tggcacgcca tgtgccttct
      661 gatgggatcc attcctgctg agtgataaca ttacaggcct gaactccttt gcaatacaat
      721 ccagcattct taacacagtc aatacactca caggcaatct agtttactct ttatattaag
      781 aggtttaggg agacaaagct catctaaata cctgcttgtg aaacaaataa gacgaattca
      841 acagatttga gaattactcc ccagctccca cacaactaca caatgagcat cagaaatcaa
      901 aaaaaaaaaa acacccagcc ctgaagctgt gcaagaaatg cttaaatatt ccaggtagag
      961 tcattctcct tacacacaca cacacatttt agcaaataag gtgacgttgt tgttcttggt
     1021 tattgttcaa gacgaggctt agtactagag tcaaagcagt ggcttttctt tgcttaaact
     1081 actcacaaaa gaggaaggat attctacgga tgattacatt a
//
LOCUS       KCKM01001377             450 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21790apa ultra-conserved element locus
            uce-2507, sequence.
ACCESSION   KCKM01001377
VERSION     KCKM01001377.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 450)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 450)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21790apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>450
                     /note="ultra-conserved element locus uce-2507"
BASE COUNT          150 a           71 c           81 g          148 t
ORIGIN      
        1 taataggctg catagatctc attgcagtgt ttctgctgtt accctgtctt aatttttttg
       61 tttatgggaa aaattgttta agacagcaag aatctcgggt cttctctttt ttatgaaggt
      121 caaactaaat tcagaattat aactgaaaaa tgaaatgtaa atacctagat ctttgataac
      181 aaagtaatta aaatgtatgg ttttgcctac tgtgtataat aagggcttat atttgatcaa
      241 ccataaaagt tatttaatca ttttaacctt ggaatactac cccacaaaaa actacttaat
      301 ggaagttagc tgagaagcat tagagtatca caacatcaag aaggctgagc gagagggcac
      361 tgaaaattca agcacagctt atttctgcca taatactata gcaggttgca tggcaaccag
      421 tggctgtgga ttttgaagtt actttatcct
//
LOCUS       KCKM01001378             602 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21805apa ultra-conserved element locus
            uce-6267, sequence.
ACCESSION   KCKM01001378
VERSION     KCKM01001378.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 602)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 602)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..602
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21805apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>602
                     /note="ultra-conserved element locus uce-6267"
BASE COUNT          200 a          117 c           90 g          195 t
ORIGIN      
        1 aaactgaagg tttaggggga aagctcacat aggtaacaaa catggcaaag aaatgcacag
       61 agaaggaggc tgcagtgcta ttttccataa aaataaccct taatctacca ttttattgga
      121 aaactgaaat atagtattat tttgaaaata caaagatttt tcagaacttt tagaacaagt
      181 ataaatatgt gttctttatc tatcatcata atatacacat acacacactc acagaccctc
      241 tgagaataca atattcattt tgctgcagaa gaacagacat tgcataacaa tgagatttgc
      301 taatgaaatc agccatcaac ctggaataca tatgtattaa accaagacct cagtgtcatt
      361 ttctttttgc atcatttgtt ctttctctca tttttccttg acctttcact atcttgtcct
      421 cctcctggtt tcactgcttc aagtacagca atattgcaaa ataatttgtt agcgctgcat
      481 gtgcaacgct tctcattttc caaaatttac ttcccttctt attgctaaat gtagattcta
      541 attgcaagga ttccatcagc actgttagca taggcttgaa agaaaaatca atgggtgcta
      601 ag
//
LOCUS       KCKM01001379             938 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21820apa ultra-conserved element locus
            uce-7658, sequence.
ACCESSION   KCKM01001379
VERSION     KCKM01001379.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 938)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 938)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..938
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21820apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>938
                     /note="ultra-conserved element locus uce-7658"
BASE COUNT          274 a          212 c          188 g          264 t
ORIGIN      
        1 taaagaaatt acaattcata agaggatttt acaaagtagg tcttcagcca acagcaaact
       61 ccgagaaaaa aaaaacgttt tcactctgca gcagtgaggc cttgcaccta gtccaggact
      121 gtgctgactg gtcacaagtt agtctgtgct aactgatcac cagcgtctca gctataatac
      181 cttgtgtgtt gttgactgtg gctaccacac catggtgtgc agaactcgat atattttttc
      241 ttgtatggga cacaaaacat ggagaacaca ctactccatc agtccaccct gctcctgctt
      301 tgagctgtcc acgttgcagc agaaagaagt gctgctcctt tcccagatga gccttcatct
      361 gcttcctcca tcacggaagt tgtccagagt tcccgagaaa tgatcgcagg catttgttgc
      421 atgcaaatag ctgccaaata aatcattgtg tattgcagca caacccctga gggggtttct
      481 acctatggaa cttgctactg tcactccact tccccatata ccttaatcat gttattcatt
      541 cagcaagaag gatgaatgtt acagcgtgag actttaatcc ctcactgctt aggatctgat
      601 tctcagagag agagagcagg gaatccagag gcttgaggta ggagtcaaat atcattattt
      661 ctcagcactt ggtttgggca aggattgcat tataagaaca tcttcctaaa acacttcagg
      721 agcaatttac tgcgtgagca tgcatgtatg tatgtacaca catgtcagta aatacatggt
      781 ttaaagagca cctttaagac agtgaatttg caacctacct ttaaaatcat ctgaacagtg
      841 ttctctctgc ctctgtgggg tagctctatg gatcataaag caactttaca agaaggtttc
      901 tttgtcccct aactctttga aataagaaca acaaaaat
//
LOCUS       KCKM01001380             929 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21835apa ultra-conserved element locus
            uce-7358, sequence.
ACCESSION   KCKM01001380
VERSION     KCKM01001380.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 929)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 929)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..929
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21835apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>929
                     /note="ultra-conserved element locus uce-7358"
BASE COUNT          247 a          198 c          218 g          266 t
ORIGIN      
        1 tcttatccag ttgtagtata tgggatacat gccctgcagt taagatccag ttcaacttta
       61 tccgagactg gctccagcag tgtgctcctt gtgacataca ccctgagcgt gcctggaatc
      121 atcctaaaca gaactttttt tgggactagg ggctggctgc ttccctgctc ttccatctct
      181 gcaacttccc ttggagatca gcaaagagaa ggaggaaatg tgtcagtggg atgttttcac
      241 ccagctttga aaagctcatg catgaaagaa aagttagatg gaaaagactg gttttgctcc
      301 tggggtaatg ttcatgggat ctacttaagg gaatgagaaa agcaacttgt gtaactctta
      361 cagtggagga ctctgtttcc caaaagggtt aatgcaacct ctcttttccc ccaatagctt
      421 catggcccta acagctttca ttgtgaaatg ggtgcaggtg tgggctatgc tttgttgatc
      481 acaatccctt ttgcagagga agctttgaat atgtttgaca taatcagctc acagcctttg
      541 cccgcactct ttcataaaca ggccattttc acatcctttt catgggatcc gacaagcgga
      601 aaaataatta atgttacctc agcctaacag tgacccagct ttgattcaaa aagacggcat
      661 gttgcataaa ctaaccattt aattgagtga tagaagaagc ccacatgtat caattctgcc
      721 tccgcgtatt atgattactg gagctttgca aggattgtgc tcccttggtc ataaagcaga
      781 gcttaaactc aaacccatga agtggtttca gaaggactga ttgagcatga gcttgggatt
      841 atccgtgttt acggtggtag gacacgggag caggggaata tgtgggtact cagccatcga
      901 ggcgcatgtt caggttatgt ccaggttat
//
LOCUS       KCKM01001381             801 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21849apa ultra-conserved element locus
            uce-855, sequence.
ACCESSION   KCKM01001381
VERSION     KCKM01001381.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 801)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 801)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..801
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21849apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>801
                     /note="ultra-conserved element locus uce-855"
BASE COUNT          250 a          162 c          150 g          239 t
ORIGIN      
        1 gggagctgga ggcgggaggg gaccccagag gagcgaggtg agataaagga atgcgatgta
       61 tttccaagag agagtttgcc atcagttagc taaaattgct tctgaagttt cgccggcaac
      121 tgttttacat gtctgacttg gtgacgaagg agctatacta tcttaataga gaactccaga
      181 acttcagaag ggtttcttct tgtttgaatg cacagcacaa tgaatttgta cccacagagc
      241 attcaccact tacatttcaa aacctacagc acactaaacg tgaaactttt gttcaaattt
      301 caaggatttt gatagcccaa gtgaatagac actgcctatt gatttttccc ttacaatgac
      361 tcttggataa cctattttct catttatttt taacgacagc tcatgagatt ttacagcaat
      421 tctgcccaac ctcctaatat caaaatccct ccttgaccct gaaaattgta attctgctat
      481 agatcacagc tgctgaatat taccttttac taagctggtt aaataaaata tgtccaaatc
      541 actagatccc acaggccatg actgcaattc taattataca gggtctgtat ttctgctcta
      601 tggtacagaa aagcacagct ctctctgagt ccacaccaaa gtgtgggaat ccagaatatt
      661 ggttctagtt ttgaatttaa aaaaaaaaaa agttacactg ctcttcaatg attttcctgt
      721 aaaactttta caagggaacc aaacgttttt gatgtgttcc atacaataaa atgctgtgta
      781 agtctggagg acagaagcat g
//
LOCUS       KCKM01001382             878 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21864apa ultra-conserved element locus
            uce-4644, sequence.
ACCESSION   KCKM01001382
VERSION     KCKM01001382.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 878)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 878)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..878
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21864apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>878
                     /note="ultra-conserved element locus uce-4644"
BASE COUNT          274 a          172 c          172 g          260 t
ORIGIN      
        1 caattaaaaa agtaataaaa ataataaaaa aaacagagaa gacagcaatt gctatcacct
       61 atttactgtc aaattaattc agttgctcct gagatgccat ctgtatcagg agagcgaggg
      121 tgtcactagc tttacgatcc atcaggagaa gtgagagcac tgttctgttt gatggctctg
      181 ataatggaaa gaagctaagc aattgcaaca gatacatcat agattttctc ataattacct
      241 gacctgttac actgtgtcac tctgccgcca aacacactgt ttttatgtca gaagctgtat
      301 gggcattctt tactttgatc attctgtatt ctgcagatgt cagcattact gtattttaat
      361 tgactctggg gtagcattaa aaagcacctt ctatttcggt tgcttagacc tgatgagact
      421 gacaacctgg catttatgaa cattaggcct tcacggtaac tgtgtcagga actgtgtttt
      481 tcctaaatcc ccgaggtatg aatagcaaaa tgatgttagt aaaccagttg cagtgtctat
      541 gcaaagagaa cctctgacac tctctagcca tagagatggc aaaccttttc attaaattag
      601 actctggagt caaaagcgcc tgttggatcc caatgtgcaa ttaggaattg actggtatat
      661 tgaaagagtg ctagggctgg caaggacaga aactgtgggt aaaagtgatg gcaacctcaa
      721 aacaagaatt tcttgacaac ttccatattc ccaacaaacc ccatttgcca gaattatctt
      781 ttcctccttc tgtaggaaca gacagttttt tcactattta gctttcttgc agcattcagc
      841 ataatccttg aaaatgaaag ttaaaataga ggctgctg
//
LOCUS       KCKM01001383             673 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21880apa ultra-conserved element locus
            uce-4764, sequence.
ACCESSION   KCKM01001383
VERSION     KCKM01001383.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 673)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 673)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..673
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21880apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>673
                     /note="ultra-conserved element locus uce-4764"
BASE COUNT          188 a          174 c          126 g          185 t
ORIGIN      
        1 ttttttaatg cagtttacaa ctctgcagtg ttgcttagta ttctaatgca tcagtcagat
       61 cccccggtta atccacgcct agcttttcca attaaaacat ttctgtaacg cacaacaaaa
      121 ccgtccgtcc atggctacag cgatgctgga gtcctaattc ctactatctc cgctcgcttc
      181 tcagcagctc cctcaggaga agctcccatc gattggatgc tccgcagcaa gatgaaatat
      241 ctaataagga ggaaagagag tgggagggga accgagctaa aaggatgaca tcacctgtac
      301 agaaagcctt tagaaactgc attagatcaa ttggctactg gatctgcaga tgcagccagc
      361 agagcatctt tattgaccta atataaacac acatctcggc acaacaactg ctcagcacaa
      421 cagccctgct ccacgttaca ttttatatcg ttttaggagc tgttaatgca catctgctga
      481 aactcttgag tatttctctt cttttctcaa aattcggtct cgtgcatcta ttaacgcttt
      541 cggcagcgtt tcggaggatt atttctcgtc tatgcatcca cgtttggaaa tcagtacaaa
      601 tgtctgcagc cgctcacatg cactgcacac acagatacac ccagatccag ctcacaagaa
      661 aatcatttct gct
//
LOCUS       KCKM01001384             832 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21896apa ultra-conserved element locus
            uce-1723, sequence.
ACCESSION   KCKM01001384
VERSION     KCKM01001384.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 832)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 832)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..832
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21896apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>832
                     /note="ultra-conserved element locus uce-1723"
BASE COUNT          273 a          167 c          147 g          245 t
ORIGIN      
        1 aaaaaaaaaa aaaaccacaa cttgcaaaaa aatgacccct acaactgaac aaactcaggt
       61 tttattctga gtgtcaagtg tccgtaggag agcaatcagc acactgcaaa ggttcagaac
      121 aaaagtataa ctgtctcaac ctatccattt agaaagaaag aagaaaagtg aaagcatcac
      181 tgacttcatg ctttattctc tgacagtatc catctttcca aattgatttt tgatatccgt
      241 agtgacctgg aagggagaca cagcgataac tctcagaaag tggaaaacaa tattattccc
      301 acaaatatga attacttgcc ggcaggttaa atctactgtg caatgaatta tgtgaccctg
      361 gagctcctat aattcttttg aattttatag agtcgtgaga gggcctgtga gctttgacaa
      421 gcacttaaca gccaaaatca gtcctgaaca actctcttgg acatttgatt tagccgttgt
      481 aggcagaacg ttgccagtca attctgcttt tgaagcaaaa gatgacattc attcatttct
      541 gaagttatag atttcatttg ttgattttat tgtaattctt tttcactggc atcttttctg
      601 ttttgctatg ccactcaacg caaataaata taaaagcagg ttgtcaggaa tagaacagta
      661 cacacacacc acagctcagg ctttacccgt aagaaattct tggtatgtat cttattaaca
      721 aagtttgtgg cccacctgtt agagaaatac tgtgtctcag gcatgagtct aaaaccaagc
      781 ctgctaactg ctttctgaca gatcattgtc tcttctgtta tcaagaacaa ca
//
LOCUS       KCKM01001385             873 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21912apa ultra-conserved element locus
            uce-616, sequence.
ACCESSION   KCKM01001385
VERSION     KCKM01001385.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 873)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 873)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..873
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21912apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>873
                     /note="ultra-conserved element locus uce-616"
BASE COUNT          256 a          167 c          188 g          262 t
ORIGIN      
        1 tatcttgttg acatctgagg aaacatgatg attatcaaca aaatgtaggg cctgttatac
       61 attgtatcac ttcaaacaca atgaggttgt taaggcttaa ttacataaga agcagtatac
      121 atgttttgca agcttgtaga acgtcacttg gagaagttaa gcaagatata agagtttcct
      181 aagcttctat tatagtttta tttccagcag tattctttga caaaccaaat aaattactgc
      241 atgtattgga cctctgaggc ttggggcaaa gaatggaaaa attatttaca aaagcttgaa
      301 aatatttaat cactagaggc agggggcaac tgtgttttaa ttagcagttc ctcaggccat
      361 tggctggctg gaggctttct caaacaacca cacaaacgca ctgaatagct gtttgccagc
      421 cttagggtca ggcctgagat gaaacagata agataattgg ctctaatgaa atccagaagg
      481 ccttggcttt cttgtttgag cttggatttg aaaagtgcgt gtggaagtga ggcttaattc
      541 aaaccagtcc tgaactaggc ccgtttttca gtgactttga tattgtttga agttctgaaa
      601 gtgttcgcca caccactagc ctgctgggct gggcctcccc ggtcacctta attactgagc
      661 tttattgctg actttactac acaggaaagg agccattata tgttccatca acatcagctc
      721 tcctcagatt ggaggaaagg gcagggtgaa aggccactgt aggaaggcaa aaacttcact
      781 ttgaggtagt cagatcattt acccgtgtta aatttcactg tgctatgtgt gtacattcct
      841 cacaacacag aagcccaatt tccatttttt ttt
//
LOCUS       KCKM01001386             994 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21928apa ultra-conserved element locus
            uce-3671, sequence.
ACCESSION   KCKM01001386
VERSION     KCKM01001386.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 994)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 994)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..994
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21928apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>994
                     /note="ultra-conserved element locus uce-3671"
BASE COUNT          328 a          215 c          208 g          243 t
ORIGIN      
        1 aaaaatgaaa ggaaaggaaa tctgatattc agaggccact ggtttgcatt attaaagctg
       61 tggtgtttgg acaacacagg atgggagtgg aaataaaagg attaatcaca aagaagatga
      121 taaagagtaa ttgtctttga tgtcatttcc tgtaattagc cttaacctca agggttttga
      181 agatcattgg aaatacaaga atgtgactta taacctgtgt acttagaatt ttgttgtagt
      241 gctcattttg tgttagctta aatatctagc tatatatata tttatagata tagctatctg
      301 atggttttcg tattccattg taaattgcct ctgccagtca attaggcagg caggcaggac
      361 atcccaccct ggcagagcat cagtgtaaga ctcttctttc tcaattttcc ctcagacaca
      421 ccatcctgag aagccacttt ttcctaccac aggaagccca agagaacact atagctagca
      481 gtctgacagc caaactgaac cctggccttt tgtatcctgc caggtttgaa aagctggaca
      541 tcacccctaa aagtgcccag aagataaagc cggtgcttga gcggtggatg gctgaggctg
      601 aggcccgcca tcgagcaggt atgcagaacc ttactgagtt tatcggaagt gagccatcca
      661 aaaagcgcaa gaggcgtacc tcgttcacgc cacaagccct tgaaatcttg aatgcccact
      721 ttgagaagaa cacgcacccc tctgggcaag aaatgacaga gattgcagag aaactgaact
      781 atgaccggga agtagttaga gtttggttct gcaataaaag gcaagcactg aagaacacaa
      841 ttaaacgttt gaaacaacac gagcctgcaa cagcagttcc tatggagcct ttaacagact
      901 ctctggaaga aacctcctaa aaaaaaccaa aacaaaacca gacacaaaaa accccacacc
      961 aacagataca taaccattca aactctgtga atgt
//
LOCUS       KCKM01001387             379 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21943apa ultra-conserved element locus
            uce-6274, sequence.
ACCESSION   KCKM01001387
VERSION     KCKM01001387.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 379)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 379)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..379
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21943apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>379
                     /note="ultra-conserved element locus uce-6274"
BASE COUNT          133 a           76 c           81 g           89 t
ORIGIN      
        1 gggagaacca ccaaagccta cacttcttcc tgcaagttca ttatcgcctc tccaaagcat
       61 gacggtggtg tgaaatgggt tagacgcacg gatgcctctg ttaacggcca aagaaaaaaa
      121 agtcgcacat cattaggaat ggaataaacg ataccgaggc acagagcaga aatgatttga
      181 ttagcaattt ccagttttga aaagacctgg aagagaacca aatgactata cagaaggtgt
      241 gatggagttc ttaattgctg taactgcaca gggagactcg atgatttgtg acatataata
      301 cagcacagta cgctaacgct aataactgtt aattaactgc agcaatgata tactctcaaa
      361 atgcacatac aagttacca
//
LOCUS       KCKM01001388            1045 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21959apa ultra-conserved element locus
            uce-773, sequence.
ACCESSION   KCKM01001388
VERSION     KCKM01001388.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1045)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1045)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1045
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21959apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1045
                     /note="ultra-conserved element locus uce-773"
BASE COUNT          351 a          193 c          224 g          277 t
ORIGIN      
        1 attaagtcac acttcaattg ctcctttgaa aaccgctgct attggcaaag ggcatgctta
       61 caaaaacatt gtaaatggct ttttttaaac tccgcgggca cttcacaaaa gtctgcagcg
      121 agagaatgag agaaattgga agaaaatatg ttactgtgca agtaaactga ttaataagag
      181 taattgatct ggtgctggaa ctggaaaaga gcaaccccat ctcctgcgag ccccaagctg
      241 gaaagtcagc tcagaaagcc acagcagcag tgataaaagt gatcgtcttg agagaagcgc
      301 atggtatttt cattttgttt gggctgattc acatagagaa acgtgctttg tccagcgaag
      361 tgaaaaggaa aacagtagct gcagtaaaag gaaatggcca acagtgactt ttatttacaa
      421 ttaccaagag acaggctatt atggaccata tgtgccacaa tcgccctcct tatcatgggt
      481 tggccatcgt gtccattggg agctgttaat gaactgggta attgagctgc tgacatgtgt
      541 taccaaaaca aaacaatagg aagaagagac aaatgaacat tttatttgcc aatcagagta
      601 ggttccgctt ttcagagagc tgcgcctaag taagtggctg aatacataaa acagtgcatt
      661 gaaggcaagc agatgcatgc acaataatgg ttaactgaca gcctatggcc catctgtgct
      721 taacattttg ttaaagaaat tacttgactt gctaaagaga caaatcatac agctgccccg
      781 agtgctgcgt tagaagagat aaatcattag ctaaactgtt tcatgcttaa aatgacaatg
      841 catattaaca gttatgccgg gacgttttgt cagcacagct tgatgcagtt ataacttaca
      901 aaaaatgtga cagctcgtag ctattcagcg atttcagctt ggaagagaat gacaacactg
      961 tgaaaacaat ttcgccacaa aacaatagac aattcacagg ctcttctttt taaatttttt
     1021 tttgaatgat gaaataatat ggaaa
//
LOCUS       KCKM01001389            1055 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21974apa ultra-conserved element locus
            uce-5256, sequence.
ACCESSION   KCKM01001389
VERSION     KCKM01001389.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1055)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1055)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1055
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21974apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1055
                     /note="ultra-conserved element locus uce-5256"
BASE COUNT          362 a          202 c          175 g          316 t
ORIGIN      
        1 taaaaatgtc atgcttcagg aagatcagac ggtattctca atacaggaaa cacttgcatt
       61 taaacacata ttttacatat atacatacga tgtacatgaa tacatgaaaa gagtgtgatt
      121 taacacgtac atataaatta ctatcaatat tcggtttata cagtacagga aaaactagtg
      181 gtttagtcag aaatatctga acactgacaa agataaaata tgtagctcag agttccgtcg
      241 tgcttgacaa attcaggctc agagctgatc ataaggcatg ctggactcct gcaacctcct
      301 aacaaaatta atgagaggag tggttttcaa cactgcccag gatcaagctc tcagcacctc
      361 aacataacta ctattaagaa atatgcacga tttttagaaa gaattagctg aaaacaggca
      421 atgtttcaga ttgtagcaaa aattacttca cctaaattta acttcaatgt gccttggatc
      481 aaagacttta ctttttaaaa agtggacacc tgcggtccat ctctggcttc atagaagtca
      541 cccactccta tttttgcact gaagctgaaa ttgtcccttg agatatccat tattccattt
      601 ctgctgagac actgaaaaaa tcacatattt ttccacttca gcttgtaaat aattacaact
      661 cagctttgat gtacagctaa ctttgtgagt gtaatgcttt gcatattcta ccaaagggat
      721 atgcatttat agatcaaatc agtaacaggc tgagatacat tacgcctcac atcataggat
      781 atttggaaat aagtatcttt attggaggga aaaaaatggc attttttaat tgcaagcatg
      841 cttagtagca ttagaacaca gaagaagaat gtacctttac tacttcagga tactgcctca
      901 gcttctttcc acaaggtgca aaatatgcta cttctccctg aagacgacca ccaaagtttc
      961 ttagtcgggt ttctctttgc cagctagagt aatatgaaat agttacacac aagagtacac
     1021 tttcaaaaga cattaatgtc aatttaagac tttta
//
LOCUS       KCKM01001390             608 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 21990apa ultra-conserved element locus
            uce-3693, sequence.
ACCESSION   KCKM01001390
VERSION     KCKM01001390.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 608)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 608)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21990apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>608
                     /note="ultra-conserved element locus uce-3693"
BASE COUNT          183 a          124 c          119 g          182 t
ORIGIN      
        1 tttttttttc ctgaagacta tcgcatttac gtaatagtcc tcttattagg gagattctgc
       61 tgaactgctg acaatgatgt acagtggtgc ttcgctggca tgacgtttgg ggaaaacgat
      121 tctgctgcac caccacacaa aaccaattag agaactattt tctgcgacag gtcaggaatt
      181 tacattgttt ctcatagaaa gatgtgcttt ttaatttctt tattaagatg acatccatgt
      241 cccttgcgac ttttagggat gacaatcatt tgctcatcac atgggaaagt acaatcagcg
      301 aaatcgcatt accggtacgg ggcaacgcca gaaactccaa gcatcgttct gcattttcca
      361 aatgaactag tttgagaacc aataattaga acaatatata tcgatagaat tttttgacag
      421 gaccttcaga tacccaccag gggagtaaag taatgatagt ccatatacag caggctacgt
      481 tatctttgcc gaacatataa acatcatctt tgtcaaatca gtaagacata tagaaatcct
      541 gtacgtcctg ggatcaggac atgacaggag gtactaacta gattcgcttt cctccttgac
      601 ttgtggat
//
LOCUS       KCKM01001391             813 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22006apa ultra-conserved element locus
            uce-6764, sequence.
ACCESSION   KCKM01001391
VERSION     KCKM01001391.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 813)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 813)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..813
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22006apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>813
                     /note="ultra-conserved element locus uce-6764"
BASE COUNT          255 a          162 c          120 g          276 t
ORIGIN      
        1 cattttaaat tgtattttta tgtaaatgtt tactgctaca tatgtttttg aattaatttc
       61 atttcccgaa agcatttatt ttttttacat tttttcgtga gtaaagacat ttaagcaaat
      121 agagttggag aaactgaaat acggttaaaa aaataaaacc ccaaacagtg taggataaga
      181 aaaagcaaac caaaccctgc agatttctta cctctttaca ccatctgtgc agtattgctc
      241 ttaggccttt tacattggtc atcctgggaa caaagctgaa ggcagattcc agcagttttt
      301 ccattcacta ttcattcaga ggttcatcag ctccatatgg atccagccaa ctgctgtgtt
      361 aaatcagagc cttttcccag aattgacatg gtaatgaagt catggtattg ctcacagaaa
      421 aggcctccat aggtattttc ctctctaaca aatccagcct tttcacccca ttcactccct
      481 aaaattatct cataacgtta caacatctgt gaactgggtt tttgcctttt aatgtctagc
      541 atgttttatt acatgactat gcattacata ctggttaaca agactcctac acaaccaagg
      601 aaataaaata aatttgcgct cttctccttc cagctcagat tgttccatcc ccttttaatt
      661 tatatctgct atatttgttt ttctcgagat agagctgtcc aaagtagtga tgtacaagat
      721 gaacttctat ttttctgatt tctatcagaa agtggtttta gaaatatgaa aactgttcaa
      781 ccacaaaatg gtaaatccat caatgtaaaa taa
//
LOCUS       KCKM01001392            1106 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22021apa ultra-conserved element locus
            uce-2865, sequence.
ACCESSION   KCKM01001392
VERSION     KCKM01001392.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1106)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1106)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1106
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22021apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1106
                     /note="ultra-conserved element locus uce-2865"
BASE COUNT          263 a          239 c          273 g          331 t
ORIGIN      
        1 aatgtccccc tcaattacat cttagagctg tagtcaggaa cacttggttt aattttgctg
       61 aaagtttcct tgtgattgcc ttagaagggt caggagtggt ttattagtca tcaggatcat
      121 agaaatgtat gatacttttc ttgtctaaaa ggtcagcact taactgtttt ttaaacaagt
      181 cgtaagcttg acttgtcttt cgcaggtctt aattttttga aatcctgctg tagcttcaag
      241 ttcattagta gccactatgg aaaggagctt tttgagtcat cagcagtatg cttgcaagct
      301 tgctttggag cttcccaact gaaaagcacc aacccgttga gaaggatcgt ggtctccttt
      361 ggccaggcta tagacagcac gatttttttc acttcttcca ggtggcgtag ggatgatgtg
      421 ctcattgagt gaacaaggca agcagttggc ggtccaagtg tccaacatcc tggggatgga
      481 cgtgtgtggc attgacctgc tgatgaagga cgacggctct ttctacgtct gcgaggccaa
      541 tgcaaatgta ggtttcattg cctttgacaa ggcttgtaat ctagatgtag ctggtatcat
      601 agcggactat gccgcttctc ttcttacccc cggtcgcttg acgcggcgca tgtccttgct
      661 ctccgtggtg tccacggcaa gcgagactag cgagccagag ctgggccctc cagctagtgc
      721 cgctgtcgac aatatgagtg ctagctccag ctctgtcgac agcgaccctg agaccacgga
      781 gagagagttg ctcaccaagc tcccgggggc tctattcaat atgaaccagc taatagccaa
      841 tgagatcaaa cttcttgtgg agtgatgcca cgtgtaaata ggtgaccaac agaactctct
      901 cttgtaaatt ttatttttta accaacttgc aatgctgttt atcagagagg ctcagaggaa
      961 cgaggaaagg cggggcgggt gtgctgtgat tactgccctt acttttttgc agaatgcaaa
     1021 attgtgtctt tcttcagcat cagttttcta atgaagatgc tcagttcaca atctaagtgg
     1081 gaattttatt tggatgctgc ttttgt
//
LOCUS       KCKM01001393             690 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22037apa ultra-conserved element locus
            uce-3277, sequence.
ACCESSION   KCKM01001393
VERSION     KCKM01001393.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 690)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 690)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..690
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22037apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>690
                     /note="ultra-conserved element locus uce-3277"
BASE COUNT          202 a          144 c          136 g          208 t
ORIGIN      
        1 gtacagcaac gtagtgttgc agaaatacct cgagtctgtg ctggacctgt atcaaccatc
       61 tcatacctct tccccccccc ctaattcctc ttttctgtca taatggagga gaaattgatt
      121 ccaaatgtgt tttcgtgacc ccttactcca tacatgttag cacctaacct taagtgatgt
      181 ttctacagtc tcgcctgtat ttacagtaat tatatgcata atgtagcata ttattgtctg
      241 gacttcctgt ttaatcagta cagagcttct tacaagtgca gctgaaaagg gcaaacaaaa
      301 ttaaagcttt atataccaaa acaagtttga tttgctaagc tcccagcatt ccaaagtaca
      361 cagatttgtt ccaccaagtt ttgcgatggc ttgcagatgg gcaatgatta atcagagagc
      421 taactgtgaa gtagtttgca attaaactgg aaagctctga agcatgctaa ttgaatcaga
      481 aaattagaga cactgaacag taattggcta tttctcatgc agcaggtgcc aggccactca
      541 tctgtggaac aaggtattta aggcgcatta gcactagtaa aaatacttct tgatatggaa
      601 cagtcagatt ttctgctcat tttcaccatg gatgtcaaaa gctgtgatgt ctagtgccca
      661 cgttgtaaag agtttgagcg gggtcgtcat
//
LOCUS       KCKM01001394             802 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22053apa ultra-conserved element locus
            uce-2433, sequence.
ACCESSION   KCKM01001394
VERSION     KCKM01001394.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 802)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 802)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..802
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22053apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>802
                     /note="ultra-conserved element locus uce-2433"
BASE COUNT          243 a          161 c          164 g          234 t
ORIGIN      
        1 tttcccctga gaatacttcc ctgatctttt ttattctttc gctgtatgat atctagtcat
       61 tttacttatt ttcacatcct tttaaaaacg tttattttaa acacagctgc aaaatgacta
      121 aaggatgatc ctgatgcaaa ctttgacatt taccaaaaga aaaaccaaag aaacaaaaga
      181 acccaaaaga agcttccaag caaatttcaa ttggcttcat tcagacaaga aacactgtga
      241 tggggttaca gagtctgaga acagtgcaga agaaaaatct tttttttttg tgttgctaga
      301 atctagtaaa tgcatgtgaa attctaccat agagtttgtt ttcaatccat gtggaaggga
      361 gggttcgagg gaggggagca ttattacagt ccacgagtgg tgtctcctct tctgagagcc
      421 catcatcata aagtaacgaa tcggaaggtg tggaagctgc aagatctaag tagtcctagg
      481 aagcaaatac acaaaaagct gggttaaggc actggcagcg ctgctgtttg ggtaaacgtg
      541 catctggttt ctttaacaca agaaactccc atccccgctg catttctctg acacctgcgc
      601 agcctctgcc tgtctgcagc cgtagcatct ttggacgtat gtgatttgcc agaagactac
      661 atatgctaaa agtgtcctaa ttctgcacat cagtaacgta accaagaagc taaagggctg
      721 tgctaaatga tttgtttgac cttcagtttc tgttatgcct gatacatacg tatgcctgaa
      781 ataatatgtg cgcacttaaa gg
//
LOCUS       KCKM01001395             595 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22068apa ultra-conserved element locus
            uce-5934, sequence.
ACCESSION   KCKM01001395
VERSION     KCKM01001395.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 595)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 595)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22068apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>595
                     /note="ultra-conserved element locus uce-5934"
BASE COUNT          183 a          109 c          104 g          199 t
ORIGIN      
        1 atatgtgcaa gtctacatat gtttttttcc agcaggactt ttccttctgt agatgtataa
       61 ggaattatgc atcagacaaa agcctcataa actgaccatt tgtcctttgg acacaatagc
      121 ctgcccagcc cctctgctcc tcctctccaa ttatgtgtga ttagtctcag tgtgttgtgt
      181 caagaagggg gagtgtgctg agtgcttatt atctgtttag gtacaagaag agcacattta
      241 ggttctgact atgaatggaa agtgagcctt tatcaggact aaaatctaaa tgctactatc
      301 ctagaaatcc ctttttaaaa acatacatcc ttttctgata aatgctgaga aaccctgtaa
      361 cagctaaagg attttgtagt gtaatcaaac tatctccctt gaattagttt atgttatgat
      421 gtattgtggc ccaagtgttt gataaatatt taatgtgact tttcttgtac tgggaaagac
      481 aaaagtccta caaagaaatg ggaaaatttt cttattttct tatagaccat tttaatgact
      541 tctcagaaaa acaacctgaa tcattaaaga atcttgtaca gtctcttaaa ccaca
//
LOCUS       KCKM01001396             998 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22082apa ultra-conserved element locus
            uce-3676, sequence.
ACCESSION   KCKM01001396
VERSION     KCKM01001396.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 998)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 998)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..998
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22082apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>998
                     /note="ultra-conserved element locus uce-3676"
BASE COUNT          292 a          181 c          209 g          316 t
ORIGIN      
        1 aaccagtgaa tgttcctgca ttcccctagc atacacttct tcaacatttt gagccctctt
       61 tgcacacctt ctgtcataaa gctgcagtta gagtcagtga gaagtaactc agttcggtag
      121 gtgtattggg agatgcttgc aggggtagat gatgccaagt cagtctctta cactgaagct
      181 atcttttccc taagggagca ggggaaggaa aaggtccata aggatggtat tagtgatgaa
      241 cagaaatttt tttggtgtct gcaagagatc tggggatatt tttctgtagg aatgtgttta
      301 cttttatagc cttgtttcct tatgcaagta agtgactgtg tgatctagca acctgagttg
      361 aatagccagt cctttaggtc tttcacaggc tatgaataca gtaagagcac tcaacccttc
      421 tgaagatatg caaatgcagg catttaaaag atttacattc atctttcaca ggcctcagaa
      481 atataaatat gaaatatcca gaaccttgtc acttcagtaa taattaagct gatggcctat
      541 tatgttcgat tgcaaatcaa tatagtatct tttggtgcca cttgagttct tgagggttgg
      601 cttggggcca acactagtta tacaattgaa gagctgcagc tgcatcaaaa acttctctgc
      661 catttccatt cagaaagaat agactggtaa caatggtggc cagcctcttc atagtaattg
      721 tgtgcaagta cacattttga aatagtgttt ttgttcagca ggtgctgtta ttttagttta
      781 atttgaattt tgaaatatgg aggagagaag gggcctaatc ttaacaacat ctaacctaca
      841 gctgttcaga acaggacagc aaacagcata tgttgcttag ataaaaatca taattgctta
      901 ttcttcctgg catattagca gaccagtgct gagcctctga aattatctag cattttcagg
      961 cttttacttt acaaagtgat ctacaatact ttggaaga
//
LOCUS       KCKM01001397             829 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22098apa ultra-conserved element locus
            uce-1800, sequence.
ACCESSION   KCKM01001397
VERSION     KCKM01001397.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 829)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 829)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..829
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22098apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>829
                     /note="ultra-conserved element locus uce-1800"
BASE COUNT          227 a          160 c          196 g          246 t
ORIGIN      
        1 aaaaatgatt accggaggaa cgcttcttag ctttaaaaga ttacctgtag ctaaataggg
       61 tgtttcgatt aatatttgct attcggccag cgggcctaga cccgaaatga gatggttact
      121 tctgcggcag gagtgccttc ggtgtggggc ttgccgagct cccggggagg ctgcccgggg
      181 agtaatttcg gcgaattgta agcggacagt gagtccgcgg ggagcgctgg caatcatggc
      241 ggaaacaatg tttgcatcga tcagctgtca cggtgattta tggcttcatt ttgctgtaat
      301 ggagaattag tggaaagatt atcagggact caacactttg gcttgttacc catgtccaga
      361 cgagcaattt gtctccctga agcagtgaaa tacttgtgac agctccaaca cttgccctaa
      421 ttcaatcaag agaaaatgtt ggaattaatt tgttacaaga aaatttaaat atgttcagca
      481 aacagtaacc gcagagcagc aggctgattt attgtgctcg gcaagatatc gatccgcttc
      541 gatctggccc atgttgaggt tttaatgtgt aataatttcc aatttaaagc tccttttcaa
      601 gatcacgggt ttaaagagag ggcaggctag gtctcaagac ctgattagga gcctgttgca
      661 atggctttgt caaaagcctg tttgaatgta aattcatagt tatcttttgc actatcttta
      721 atattcttga catggatttt attgtgtgtc aaacctcagg ccagctgcct gccacaacca
      781 ttaatgaaac atcttaggaa ataaatctca gtctttatac aatattttt
//
LOCUS       KCKM01001398            1037 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22113apa ultra-conserved element locus
            uce-8040, sequence.
ACCESSION   KCKM01001398
VERSION     KCKM01001398.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1037)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1037)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1037
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22113apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1037
                     /note="ultra-conserved element locus uce-8040"
BASE COUNT          210 a          311 c          235 g          281 t
ORIGIN      
        1 gtaggggctt gtggggcggg aaagccatgg ggctgaggca gccagcatcc ctctgtaact
       61 caccgacgtc ctcctccttc ctcatcagct gcctcttaaa tctcagctca tcccctttgc
      121 ctttccctgc tcgactggtg ccctcctctc cttctctgtc cctctctcta cccttccatg
      181 cctccttcct cctctcctcc tgcctcgccc tagtttttcc tttctctgcc ctctctatct
      241 cctcttcctt ttcctcttcc cgtcactcat ctgtgcctct tctttcccca ctcccttctc
      301 ctcctctctc tccctggctg tgctgtgtta ctaatgtgca gtaatggtac ggctggaaag
      361 tcatttgcgc tccccttctc tttatttttt ttcctgcagt attattaaaa ctgctccatc
      421 actggctgta atgggagcgt ctgtattttc tccctcgccc gtatccctga catgacataa
      481 tgcctgccct caccaagatg ctataacacc gaggtaattg aaacataact caccgtaaat
      541 tacaggccgt tgttccaggc agggccccgg ccatgcttcc tggagctcat tccaactgga
      601 agctacacat tgctttaaaa gggatgctta agcaaaacaa agccatttaa agagcaacac
      661 aaacatggag agggagggga gcacagggct tgggctctcc tggagatgtg ggctcccgcc
      721 tgcatggcag ccggtgagac tgagcagtca acgggcactt acggtgactt ttctgtggtc
      781 cgtacgtaca tagacggggg gaccagggct gaggtgtcct cacagaagca ggtgtcagca
      841 tcaaaaaagc atctctggta gcagagaggc ataggacaca gtgtgccatg taaacaactt
      901 ccaagctaaa aaagtgcagt tggcaggttg gaggtccaat ggtttgatga gatgctcgca
      961 gagttgatgt gccctgtcca tccctgcagg atctgagtct tgctaaaact ggtgaggctg
     1021 cagcctccaa aaggccc
//
LOCUS       KCKM01001399            1058 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22127apa ultra-conserved element locus
            uce-1277, sequence.
ACCESSION   KCKM01001399
VERSION     KCKM01001399.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1058)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1058)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1058
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22127apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1058
                     /note="ultra-conserved element locus uce-1277"
BASE COUNT          346 a          204 c          201 g          307 t
ORIGIN      
        1 gcctatgcca agcatgttat ggaattttaa agttacagca tacgcattcc agttttagtt
       61 agaactcaat aacgtagcag aaatggaagc aagcattgga tcttcacaac agaggccggg
      121 atctgggtgg atgagctctt gcacaggaag ttggttcaaa taatttcttc cttgcaattt
      181 catttgaaag cgttaaccat agtctgtaat taactcagcg ttgaagatct tatagcatct
      241 ctctccaaac tgtaaacaca cagcaacaca gaatcattag tgccatggta cctgcaactt
      301 cacttcaaaa aatatgtacg ttaatactaa ccattactcc cttctgaatt tgtattttgc
      361 agcgcagaca cagagtgcta gaggaaacag gaaacattgt gctaacatga ctatagtatt
      421 gatgaataaa aactataacc ctcaggctaa gctgccaaat aagtagtgaa ttaatttctg
      481 taaagtactc caatattaca aaggtgtgtt gaaaggtgtc tgctcatgtt tcaaattaaa
      541 cgcactgctg gtcagcatta gcacctcagc tttgaacagc agccatttgc ctataacact
      601 tcaggggctg ggaaaaacgg atttgccgtt cacactggaa taattagaac atgtcaggaa
      661 gaattaattt cctcattttt caaaaggata cacagaaatt accatgttat tatatgacag
      721 ggtcccttgg agaattgtat taaatttaat ttctagcgca gcccacacaa caaattaaag
      781 tcataaataa gatggaaaga agcgggacgc agagcatatg tttatggcaa tgagcgaagc
      841 caagggacca gaaacaacta tcttcatttc attttattta aatcagccag acactgtgta
      901 tctgaatgac agcacttgtt aatggtgctg agattatagg ctccttaatt ttaggaaaca
      961 gaagcagtca ctcagtattt gaaatgcttt tttttctaca atacagatat tagtttaaag
     1021 ttgttccctt tcaaggcagc ttctcttggc cctgcagc
//
LOCUS       KCKM01001400             637 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22143apa ultra-conserved element locus
            uce-2455, sequence.
ACCESSION   KCKM01001400
VERSION     KCKM01001400.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 637)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 637)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..637
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22143apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>637
                     /note="ultra-conserved element locus uce-2455"
BASE COUNT          169 a          123 c          161 g          184 t
ORIGIN      
        1 cgaggagggg atggaaagag cgagacacgg ccctttttgt taatctcacg gttccgtgcg
       61 tgcaagcgcc atcctgtcac ctctcagcac gttggagcat ttgcaaaggc aaggagcaca
      121 agcccagcca cccccagagc ggagccgggc cggcttgctt tggaaagcag ggtactgcag
      181 ggaaggggag gggagtacat atggcttcag aggttgggtg tatctataat ttctgctatc
      241 ctgcaaatgt taaaagtcac tagaatattg tactttccgc tacttcagga cgttctaatg
      301 aaccaatgtg gcaagactac tggacttaat ttaatggtac tatatattaa tactccttat
      361 tatatcacgc ttgcactaaa gacggggagt gagcagccct ttttcgagtg cattgagtta
      421 tgaataaagg tggtggaagg gtatctaatt gtattatcac atgtattccg aatgttaaga
      481 atccaggcta cgttgaaatc agcaatccag ggttggtaat gttggaggac acattcattt
      541 ttaccttgtg gatgcatagt gctgtagggg tcactgttgt atacagtctg ttttctattt
      601 gttaataaat ctacagcatc attgcataat tcttgat
//
LOCUS       KCKM01001401             560 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22158apa ultra-conserved element locus
            uce-5803, sequence.
ACCESSION   KCKM01001401
VERSION     KCKM01001401.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 560)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 560)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..560
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22158apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>560
                     /note="ultra-conserved element locus uce-5803"
BASE COUNT          153 a          115 c          119 g          173 t
ORIGIN      
        1 tccttcaagc aaattaccat tttgcttatt gggcttgtgt ggacctttta aacccgtcct
       61 actttctatc agtattcact ctcacgttat ttcctccatt tttagggagc tctgttgagg
      121 agctggggat ccacacgtag agagaagatc aacgttacct gaacttggaa tcgttgggaa
      181 atgtcaaggt aaacgttaaa ggactgtttt ccctttgaag cccccacgtc taactataca
      241 atactattga cttgagaagt aatgctgaac actggaagtg ttcagtcagc attttaaact
      301 attatgagct accttctgaa ccattgccaa gttaatagac aatgaaagat aatgagcttg
      361 aaattgggtg ttaaattgca tttttggttc tctccttttt gaagttttaa ctgtttcctg
      421 cagcatcatc tttgatgtat cattatgcaa acgtctattt ttaggtgaca aaaaaagtca
      481 agcgtgggct gaaccctcgc tcctcccatg acatgtgtgc gggaaggggt ggagaggcag
      541 acgacacaca gcgagaccca
//
LOCUS       KCKM01001402             196 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22174apa ultra-conserved element locus
            uce-6021, sequence.
ACCESSION   KCKM01001402
VERSION     KCKM01001402.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 196)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 196)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22174apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>196
                     /note="ultra-conserved element locus uce-6021"
BASE COUNT           68 a           40 c           30 g           58 t
ORIGIN      
        1 tcatttaatt tgatagtgta taaagcactt aaggtacttg atgaattatt gatcaaatag
       61 aaatcagggc gtccaacagc tacttattca atccctattc acacgattaa atatgaaatg
      121 aactcttttt tctccccaat ttgcacaaca agccttacgc cacgaagaag tgaagcgaac
      181 agctcttcag gtataa
//
LOCUS       KCKM01001403            1032 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22189apa ultra-conserved element locus
            uce-7376, sequence.
ACCESSION   KCKM01001403
VERSION     KCKM01001403.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1032)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1032)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22189apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1032
                     /note="ultra-conserved element locus uce-7376"
BASE COUNT          284 a          251 c          216 g          281 t
ORIGIN      
        1 catcgggata agcatgtttg taaaaacagt ttcctccaaa tggacagctc ccacggcctt
       61 cgtcaaaata cctgcatggc ttgttgctgg aaaggaaaat atcgcaaccc ttactcatgg
      121 cagaccccaa ccaggcttca gaactgcatc tacctgtagt ccaaaggggt cctcaggtac
      181 catgtggagc tgaaggtatt tggtcagtgt aacagctacg cacagaaatt acgtattaca
      241 caatgtgtgt gggtagatgc atgcacaggg acacccacgg ctcgcagcgc acaagctcat
      301 accgccttac agctacacca ccagcgtttc gcacagagaa gggacagact gaggtcaaag
      361 aacacaggaa cagtttccca actacgtggc tgcatgcatc tgtgggcagg taggcaagga
      421 cacacttcac acgtggtggt ggaaaggaag cgtgtgaggg ctttatgtca acacccttct
      481 tccccaggtg tgcctttatc tctgcagtct caacttgacc aaaggctgca gtgctcatac
      541 ctcattgcct ccttgtattt ctgaatgagt ttctgcttct cttccttctc ctccacccag
      601 tactcacttg gaatgacaaa gttagatgtg atccgacatt ctgggcagga cctggggaat
      661 gaacagactg tgctgcaaaa ctccacatca cagggcgctc tctctcctac ataacaagtc
      721 atgacacaga tccttcttta aagatgtatt gtgcccatac acttgctgta tgagcttttc
      781 aaactagatt ctctcttatg cgggaaaata acctaaactc ttaaactctc ttcttcaaga
      841 cctcaatggc agctggtcag cttatattag aaaagcttga aaaaacactt cacacagact
      901 cttttttctt tagaattaaa taaatttatt ttggtttgat ttctgtgttt atttgatggg
      961 aactttgttt ttttagaaca gcctttaaat ggagaaacgc tctatcaact gatcaaggaa
     1021 ctatggcagt ac
//
LOCUS       KCKM01001404            1001 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22205apa ultra-conserved element locus
            uce-186, sequence.
ACCESSION   KCKM01001404
VERSION     KCKM01001404.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1001)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1001)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1001
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22205apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1001
                     /note="ultra-conserved element locus uce-186"
BASE COUNT          288 a          224 c          176 g          313 t
ORIGIN      
        1 taccacattc tgggacaaca gtggacctgc ttagcttaag tggactgaag caaccatcta
       61 tctgcactag agatgctact gctctttata cctcggcttt tttactttct ttcctttact
      121 tttagtacaa cagaccaaat ccatctctgg tatagctgct ctgaagccag tgaagttact
      181 tcagggatta atttgaccca ctttacgctt ttcaagaacc taagcaacaa tatctctgca
      241 cagcttgagt ggtgttcaga gaagagatgt acaacgcatc tttgtcttct tcctgctcat
      301 aacgagcagt gtaggtcatc tgcatcatta acatttgcag ctgatgcatt tgcgtagtct
      361 gtatacactt cttggaagtg cacagacctt ctcattgttt tcagaacctt gatttttctt
      421 agtattatca tcatccaaat gtatttaagg atgaaactat tagaaacaca attggtgaat
      481 taatgtcatg aggactgctg ctggcagctc atcaattttt gatatgccac tcagacaaat
      541 gaaacataag ccacccagaa caaggggacc ttttgacact tcaaaggaaa cccctatggg
      601 tggtttcctc ttgaagctgc actaaactgg ctcaatctcc tcagctggaa gctgccaatg
      661 tctcattaac ccctaaacag gccctgcatg agcttttctt ttcagctata attatgccat
      721 gcactcctgt tatgctgtac tgaattgcaa cactgtcacc agcacattat aaacatccac
      781 cctaattgaa aagcagatta gactcttgtt aattagtgaa aaagcccgcc cacttgcatg
      841 cattatgatt gcctcttaaa tactgaggat gttgaaatcc ctcagaaaga caaggcagac
      901 ttaattgcaa taacctgcaa attaagttta atttacttta aatttaccgg tttagcaggc
      961 tcatttgatg gtgttaatgt tctagcaaat taattatctg a
//
LOCUS       KCKM01001405            1001 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22221apa ultra-conserved element locus
            uce-7906, sequence.
ACCESSION   KCKM01001405
VERSION     KCKM01001405.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1001)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1001)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1001
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22221apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1001
                     /note="ultra-conserved element locus uce-7906"
BASE COUNT          304 a          155 c          218 g          324 t
ORIGIN      
        1 atttttcata tattagaaca attgcatttc ttttaaatct cacagaagtg aaacttccct
       61 gtgaaagaga gcactctata cagtgtgaca actgcatatt ttaaagcata tgtttataga
      121 aatatcctta tgttcttgtg ctttccacac aaatccagac tactatgtac acatcatttg
      181 tatgcttgga tttgtgcatt ttgcatatta cagacacgga tataaaataa gatgtgtatg
      241 catgtatata tgtatatata tatatttgaa ggggaaaagg aatttatggg aggctggaca
      301 gatttaattt gtctgcttgt atttagcact taagggctta tatagtcagt ttgctcaaaa
      361 gagtgaagaa gtactccttg cttatgcctc aaatcagaaa tgcatgaagt gcagctgcag
      421 agataataca ttctccccaa aggctttggc tgagcaaatt aggtgtcaat ggggtgcctg
      481 cacaggcagt actctctcta attagtctct tgagcctagt tggtggcggg tataagatga
      541 tctaatcaat tggtctgtgt ctggtggtac gtgtaaaaat cctggcaggc agagctgtct
      601 cccacaggtc actcacctgc acagcgggaa cgctcatttt catttttcat ctcttccatc
      661 acatgatgct gacagttggt tttaagaaaa ttgaatccaa aaaatatcta gttcataggg
      721 catgtaggtc aaaataaaat tgcattatgg gtattggtga tccaattaat taatatttat
      781 agcaacgagt tgcgtgtaga tattatctgg gtgcaaatag tattgataat gtttggttgg
      841 ctttttaaaa tgacttctct agcaaaggca ggaatgaaag gtatggggaa aaatcacctg
      901 ttaatagtat acctttttta gagagaatga gcagtatctg gcgtgtgcgt gtgtggtgga
      961 gggagaacga ggaagaatat attattgatg atcttaaata c
//
LOCUS       KCKM01001406            1089 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22236apa ultra-conserved element locus
            uce-938, sequence.
ACCESSION   KCKM01001406
VERSION     KCKM01001406.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1089)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1089)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22236apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1089
                     /note="ultra-conserved element locus uce-938"
BASE COUNT          322 a          207 c          213 g          347 t
ORIGIN      
        1 aagggatttt cgtcatttcc tggcttcaac cttatgttca cattcctaca cccctagagt
       61 ttgtcatttg tggctcccca gaattaggtg caacctttaa gacacttttg atccaccaac
      121 atcctaccag tactctttga tacttatttt aagttggaat ttcaagtacg attatacaca
      181 tctgaaggaa aattcactca ttttttgtag atctgcaaat ccacagttgg gtctaggcag
      241 aaagtggggt ggaagcccca caagcaacta tttctgaagt cagctcgatt tctgtgtgtt
      301 taagctatga attagttcat ttatatttac ttttatgaag ctgattaacc agagcttctc
      361 tatctgatga aaatcatttt aattgtagtg ttaggctcct gtgtaatatc cattacatta
      421 tgaactgttt aaattctaca tgggtattgt gtaaattggc cctttgtgag ctgagaagca
      481 attacgacca aacagctctc ttttaaatgg ctacagaact ttgtggtgtt gttcaggaca
      541 atcagaaaca aaggaggctg tttaattgta atttaatgga atatcaagga gtccatggca
      601 ttagatgctg gcaacagaga gcaggagaga aaaattaact gcaattatgt ttgattaaag
      661 ctatccttct caataatcag ctatcctgac aggccatggg gctctagtgg gtttcaggat
      721 ggcaaaaggt gttgagcaat attagggcca ataaaggaga tattagcata gctaattaca
      781 gcactgcaaa acctgtaaaa gggacctctg tgtattgtaa tgtgtgaaat aattggccga
      841 ggccattatc aattacataa ggaatgaatt tggtttgtca gagaaaagct gatgagatgc
      901 atttcatttg acactgctcc tttccctcac gttctcgtgt aactaaggac ttatcagctt
      961 ttatcaaaag ctgcgactta ccagtggcca aatcactgat aaaattatct tgccagcaag
     1021 tgttagataa ttaatacaac tcatcctcac tgccttccct gctactgctg tttttcacct
     1081 aactgaagc
//
LOCUS       KCKM01001407             296 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22251apa ultra-conserved element locus
            uce-3442, sequence.
ACCESSION   KCKM01001407
VERSION     KCKM01001407.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 296)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 296)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22251apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>296
                     /note="ultra-conserved element locus uce-3442"
BASE COUNT           90 a           58 c           54 g           94 t
ORIGIN      
        1 gccgcgacac gcggctcttt ctgctatagc cactccgcag taaacacact cattacaacc
       61 cgctggtccc cggaggcaaa gcatgtttga cattattaat tggcttttct gtataaggag
      121 tcaaatagat gaaaaggttt atcaagctga aataattaat tttgcctgaa ttcgctgaca
      181 gttcagttct cccgcaaaag accattttaa aggtttggtt tttttttccc cttgaatttc
      241 aaagttcaaa agacataata gtggtaaaag tgaagctttt tagtaaatta taatta
//
LOCUS       KCKM01001408             880 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22265apa ultra-conserved element locus
            uce-1775, sequence.
ACCESSION   KCKM01001408
VERSION     KCKM01001408.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 880)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 880)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..880
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22265apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>880
                     /note="ultra-conserved element locus uce-1775"
BASE COUNT          306 a          140 c          143 g          291 t
ORIGIN      
        1 ttaaagaaaa aacactttct tcagatgcca ttcctctgta tgcactcatg tctccaaggc
       61 ttaagatcta acaatcctct aacaacttgg cctggaaaga tgaatagctt ttaaaacatt
      121 gtgtagattg tattaattgg gaagggagta atgggtttgg aataactgga acgtttttta
      181 aatagcttga ttacaaggat tatcacatgc acattgaatt agacaaatcc agggaaatga
      241 gaataatttc tgcctttcct gggcatgcat ttaaagtaga gaaatgtaga actaaaagca
      301 aatagcacaa cctgttttaa tcaaagtagt ctagcaagaa acaatcaatt aaagaacagt
      361 ctgattctct gtgacatcaa tgtatgaaaa tctgttagac gccagattgt gtctcaagac
      421 acatatgatg aactgaacaa aatgacctgc taatagcttt tacgggtaat aaatgcatca
      481 tgttattggt aattctgcag atggtaaatc aagctaatat ccaggctgaa acaagctact
      541 tgttaaatat gcttcaaaaa tgtttctcct tgttattcca taattgtatc acacagaaaa
      601 ataaaatgac tgctacttat ttttaagcat tttaaatcaa gatgtgtttc aacatgcaga
      661 cattttaatt ttcaaattct ttagagacaa catttttcta actgttctga gcttttgaag
      721 cccagcattt gtatttagat tagcaggtct gtatacacta ttatataaaa atgttctcag
      781 ctttactgtt taacatatat tttgaaaaag attttacaat atctaatgtt aatctgaatc
      841 tactattcag gatgcaggac tttctcttgt acagatgtaa
//
LOCUS       KCKM01001409             898 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22280apa ultra-conserved element locus
            uce-956, sequence.
ACCESSION   KCKM01001409
VERSION     KCKM01001409.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 898)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 898)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..898
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22280apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>898
                     /note="ultra-conserved element locus uce-956"
BASE COUNT          243 a          164 c          206 g          285 t
ORIGIN      
        1 tgtctctttg tggttttctg gtgtgaaaag ctacagggaa ggaggaataa ccaccactct
       61 cagggcagcc tcggcaaccc cctccgaaat cctgggctag ttgcagaggc gttggggttt
      121 atgccatcct atctccaaat gtttcaaagt ttctggctga cctgattcat aggcggggga
      181 aaaaaaaaga taaacaccct ttctgtgttt gcagtcatat gtaattttta tctcttgacc
      241 tttaaacgta agcagcagta aaatgaagaa ctatggcagt catttaacac cctgcctgta
      301 ctaactggtt tctgcctgtg agccgtggtt ttaaattggc taatgcagaa tacttgcaga
      361 gctaataata attcagatta ctcctgtcag ctattccggt ttcatgggta atttagtagt
      421 tgaataaatt tttaaaaaaa ttcattcgtt cccatgcact gttatgaatc agtagatggt
      481 ttaccattgg cagcagtaac tgtaagaaga tttaaattgc tactgaaaag gatttgagtg
      541 aaggtaatgt tttataatgt tctaagccat atgcactact ttcaggcctc atcagtttta
      601 cattgattcc tagtgaagtg tttaattgca tcatgaatgc aatataattc agttcttttt
      661 gctaatatgg tatatatctc aaagtgatat acagcactga cagtgaagac tcaggatttt
      721 cttaggattt gaaaagatgc gtccgggtgt gcgtttgcgt gcgcgtgtcc acatctggtt
      781 gggagctctt ggggggggta gtctccggac ttcgcattgg gtacttgggg ctaccagctc
      841 tcctggaata tctgcgtggg catcagcagg caagggatat atatgtaata aatatgta
//
LOCUS       KCKM01001410             949 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22296apa ultra-conserved element locus
            uce-4713, sequence.
ACCESSION   KCKM01001410
VERSION     KCKM01001410.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 949)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 949)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..949
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22296apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>949
                     /note="ultra-conserved element locus uce-4713"
BASE COUNT          318 a          199 c          122 g          310 t
ORIGIN      
        1 gtatttcttc cattgcattt ttttgtctac caagtcacca cttcttttgg gctttttctt
       61 tacatcaaca atattcagaa ctaataccaa atttgttgat gaaggaatgg ctgtttattt
      121 cacaatggaa aagaaaatta tgcagacaat ctggactgtg tacttcaaga atgtcaacac
      181 accacaatta caaatatcgt tactaatatt gctacatgta aggtatatgc atgtaaggcg
      241 cctgattaca ctattaacaa gcagttttcc tgtatacata tacatctgaa aatagagaat
      301 tcagtctatt taacaaatca ctaacaaagc tattccttag ctcatccctg ccataacctg
      361 ctctattcag aaacatatgg gaaaagacat taaataacca gtgaaaacca tggacttctg
      421 gtattagtgc tacacattgc atacccctat tcattattcc acctcccttg tttaatctat
      481 cattaagaat cagtgaccct acactaaatt taaagcagat ccttccttcc tcccatgcct
      541 aaattcacat acttttctag ctggggatgc cctcgagtat tagccactct acagggtttc
      601 tctaatctca gctctgaact atgttgtgct atagaagcaa gaaattgctg gtttacatct
      661 ttaactatgg aatcttccac ccaaaaaacc cctcatttac ttaataagac agagaaaaat
      721 ctttcattta gaacatagtt aacacatacc aaaaaaatac tattttcctc tatatgatat
      781 agaataaaag ttacaaaagc atattatttt aaagcactac ttccccatac ttatgtccca
      841 agcacaattt cattggaaag aattttaaag ctttcacaag tttattgtct tatcttacaa
      901 gagctagatc tttatttgca gtcaaagtca atatgaaata tgcttctag
//
LOCUS       KCKM01001411             579 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22310apa ultra-conserved element locus
            uce-968, sequence.
ACCESSION   KCKM01001411
VERSION     KCKM01001411.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 579)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 579)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22310apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>579
                     /note="ultra-conserved element locus uce-968"
BASE COUNT          185 a          105 c          135 g          154 t
ORIGIN      
        1 aaactttctc ctacagtggg accgtagctt cttgaaaagg gtagccattt atcacagccc
       61 taaatgaaag cattccttgt acacaaatgt ctttttcttc ctttgtctaa ttactgaggg
      121 gaaaagtgag aaggaaatgt caaaacagtg aaacagtggt gtatagagag cagtcacttt
      181 ggagctcaac cagcttttgt gaaggcctga gcgatttgtc aaatggttgt ggcataagtc
      241 aagccctgag gttgaaaggt cttgacctaa ggagtgctga aatcaggcag tataagcaag
      301 agggctgcta gaagtttcag ctgtagtgga gatgaacaat gatgggtgct ggacacaaca
      361 aaacctcatc tgcataattc aggtaaggaa ttttattgaa tctgacaagt atgtgacagg
      421 ctgagaaaga gaaaagaaca tgctcttgct gggaaccttt aaagctcttc agttaaggta
      481 tgtggaaata aatgacagct aatctcttca ctaaaaaaac tgtaaacaat gccattttac
      541 acagggctca cccgtgacct tttcatagat caggctatc
//
LOCUS       KCKM01001412            1061 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22326apa ultra-conserved element locus
            uce-5300, sequence.
ACCESSION   KCKM01001412
VERSION     KCKM01001412.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1061)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1061)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1061
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22326apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1061
                     /note="ultra-conserved element locus uce-5300"
BASE COUNT          288 a          200 c          255 g          318 t
ORIGIN      
        1 tgtggaacca tagtcctaaa cgtggcaaac ccaactgtca gtgcttcagc aggaaaccca
       61 atgacaaact ccagcaggct ataagatata gtgcttttct gtcatttatg tttaggaatc
      121 cttgtgcata gctgcttatt gctagactta ctcttttaaa gcaagggctg tgttgacaat
      181 cctttcttgt attctcatac ttaaagaaac ccacttcttt cagcactaga gtggcaaaaa
      241 aaaaaaagat gttgtgagaa gtgtgtttct tcagttcttt tcggtttaca actcttaaat
      301 ctgacaggct tcttgtgact aaggaggaga gggttataac ctcgtaaatt agtgtgttcg
      361 ctgaatatca acagttctag cagttgtgca tgttttactt cttacttgtg tgtggctaaa
      421 taatccgttt gatggcattt ccctgatttc tctttcataa aaaggcagat cgggagcggc
      481 gcacagaaat ttccttacta gatgacattt catcgcaatg tccgatcgtt tggggcaaat
      541 aaccaaggga aaggatggga aaagcaagta ctcgactctc agcctgtttg ataagtataa
      601 aggaaagtca atagaagcaa tcagaactac aggtaagaaa cactttctga aagttccttt
      661 tggtatcttc cgcaagtatt gttgcagagc taattcaggt tgttggccct gggggtagaa
      721 tgcctggtgg gaagcagctg ggttgcagag ctatttgtgc tggtgtctaa gcctgttttt
      781 cattaggact tcaaggaaaa tgtcttgttc ttgcgctgct gttattgtag agacatggag
      841 gaatcacaga aaacagctgt aggattcttg gccctttagt ttagcctctg tccttgctgc
      901 acagtggtca ggttgcagac ttgagtgaaa ggttgcaaat ttgaataagg ccctgtaccg
      961 aggccctaag ctataccaag acagggcagc taagctgact gaggtgcctt aagttggtca
     1021 gaccttgtgt gaggtgacag ttgaggactg aagtcctcag a
//
LOCUS       KCKM01001413             893 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22342apa ultra-conserved element locus
            uce-527, sequence.
ACCESSION   KCKM01001413
VERSION     KCKM01001413.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 893)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 893)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..893
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22342apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>893
                     /note="ultra-conserved element locus uce-527"
BASE COUNT          257 a          142 c          160 g          334 t
ORIGIN      
        1 aatggaaaat ggattttcag attctttata tcaataaaaa attgcattaa tgtaaaatga
       61 tgcaattaaa gtgcaatttt gtttctactt ttgaattgta gttcagtgtg tgtatttttt
      121 gacattaatt ttacattttt atgagaatgt gcatttgtat gttcacattt ctgtgcttct
      181 cattctttgc atactgaaac agtgattttt taacttttat ttattgccgt tgttcatttt
      241 ttatgtagta tatttttaaa tgttaaagaa tgacacattt tgggtaattt tcctcagtct
      301 taaaaaaaaa aatcaataag ccattttagt ctctatctat caaagttgtt tcatacttgt
      361 ctattttaaa gcaggactgc aatactttaa taggattgag agagctattt gaaatgtatg
      421 ccaatgattc ctgtcatttc atggcagccc tgccatggtt cactgagccc cctcttttct
      481 cttgtcagct caactgaaga caagcattta gttgcaaact ttaagcaggt tgtgcaaaac
      541 agaaatgatg tgactgcttc tcttcctgca caataatgtc actgctggtc aatgtgagaa
      601 ggtcaggttg ctccttgtaa agctacatga taccacttgc ctatttgaac aagttaagtt
      661 aactgctgaa tctggtccct gcaggcgctg gaaactcacc cttttatcaa gtctgcattt
      721 cataagaaag aagaacaatt gtgcagggag gatttctgat gatatgttta tgtacgttat
      781 aaggacagtt cccaaaccag tgttgcaggt aatatattta gtttaagctg aaagacttta
      841 aagtaatggc tgttttgacc ttcagataga ctcctttttt gttgttgttg gta
//
LOCUS       KCKM01001414             572 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22358apa ultra-conserved element locus
            uce-5829, sequence.
ACCESSION   KCKM01001414
VERSION     KCKM01001414.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 572)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 572)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..572
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22358apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>572
                     /note="ultra-conserved element locus uce-5829"
BASE COUNT          187 a           96 c          121 g          168 t
ORIGIN      
        1 ttttcccaat ttgttaagat gctgaaatct gctttgtgtg atttatgaag gaacttgaag
       61 cgattagttt cacagtgcat gaaaattcct caggttcaga gggatgtcca atctgttaca
      121 ccgtgagctg ttgactggat gagaacatga gcagctcgga gccataagga gattgtgttg
      181 agttattaaa cacttgtggt aaagctgctt attgttaatt ccccaatgtc ctgctgaagc
      241 gatcggataa gatcagatcg gattagatca aagagcctgg gaaccagcct ttggagcaga
      301 ttcatttaat caataaagag ggcctccaaa gagagcgaga agcagtacca ggatcatgag
      361 agattagagt aaggaaaata agaaacaaca gattattttc ccttattttt aaaacataat
      421 tctgtaagcc aaagcatgat tttgtgtgtg tttgtgtata tgtgtttgca aattcttcta
      481 accaaaccag ccaaaaagga tataaatgct tccttaaaac ttcattacca agcagacagt
      541 ttaaacccaa gtattttgta atacagtaat ac
//
LOCUS       KCKM01001415            1053 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22374apa ultra-conserved element locus
            uce-6617, sequence.
ACCESSION   KCKM01001415
VERSION     KCKM01001415.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1053)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1053)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1053
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22374apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1053
                     /note="ultra-conserved element locus uce-6617"
BASE COUNT          326 a          180 c          206 g          341 t
ORIGIN      
        1 taggaaatat tgtgcacttt aaaattgaag ctttgacatg atacaagtta gactttattg
       61 agcaatctgg ataatcatgt gttttatggc tttcagatgt tcttgctgca gcataaaggt
      121 ccataaatat ttagaagagg aagtctatgg cccatttatg cctattttat gcagcaatct
      181 ttttctttat tgaagtttgc catttcatgt atgatagcag cattttagtt ttcaaatagg
      241 tttttttttc ctatggatct tcttgtaaca cagaagcatt gaggtgatca ggagatgaat
      301 tctattttaa cactcacaag ctggaagata tcaacaaaga ttagatggag aaaaataaag
      361 aaataatcta tgacagtgtt gagaacgatt cccagaattt taaatacttg ttaaaggctt
      421 tgctgtattt cacttcaata aacatcatgc tccagttact acttgaaacc ataggggcat
      481 tatcctgtgc agcacttatc aatattttaa catgtgaaag tcaaatgatg ttgaaacatt
      541 gaactatatt tccatctgtg caagctaaaa tggtacaaat gcatcccatg taatggaata
      601 ctacatcccc agttactttc ttacaagtga tacctgattc ctctgtattt tctgtagttg
      661 tttccaatgc tctgatggtg cccaaaggaa gactctcttt aaaaattagt ttttatcatt
      721 gaaagaattt taacccaacc tgctttaaat ccagagaaaa caaatgcttg taacacggta
      781 ttaaaattgg taactaattt tcagctgctc ttgtctcggt gctaaatctt tttgtgcata
      841 tgtattttgt gtggaaattg gagttgatac caaaatgaag gccctgagag aggtaagagc
      901 agaaatgcac tgctcctgta agagattctg tgacctcgcg cccagtggaa aaacggtcag
      961 cattgtccct gttctgcttg gtgggcaata gcagaagagg attgcacgtc ccaccacgtg
     1021 acaggaagaa agaaggaggt tgctgccaag gat
//
LOCUS       KCKM01001416             325 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22389apa ultra-conserved element locus
            uce-7563, sequence.
ACCESSION   KCKM01001416
VERSION     KCKM01001416.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 325)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 325)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22389apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>325
                     /note="ultra-conserved element locus uce-7563"
BASE COUNT           93 a           69 c           85 g           78 t
ORIGIN      
        1 cgaacgggag gcacggaaaa ttgcttttta taattaaaaa gggaatctca gatgttttat
       61 atcttgaata tttacaataa aaccttcaag tgcttgtcaa gagggtaatg tgtcattagc
      121 aggagccttt gcctctcttc tcctctcgga catgacagtg cagcaggata agagaagagt
      181 aattatagtt cagcagggct gccaggtgtg ataaatgagt aatcagcaca caggagcccc
      241 agccctcaaa ggaggactat tacagtgtta tcagctgcag gcccgggtgt acggtggccc
      301 cgcgctgaga ccgagacagg gccct
//
LOCUS       KCKM01001417             181 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22404apa ultra-conserved element locus
            uce-4421, sequence.
ACCESSION   KCKM01001417
VERSION     KCKM01001417.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 181)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 181)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22404apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>181
                     /note="ultra-conserved element locus uce-4421"
BASE COUNT           60 a           37 c           28 g           56 t
ORIGIN      
        1 tcaatcaaac cagctggcat aggaccatat ttcttgtcac caagaggctt aaagcaaaga
       61 atctatgcct aattctctta aaccttacag gtcaaaaggt tttaaaattg tttttgacac
      121 catttctttg ctttgtcaac aggcccgagt actttttaac atgtaaagga tatcaaaaag
      181 c
//
LOCUS       KCKM01001418             595 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22418apa ultra-conserved element locus
            uce-4575, sequence.
ACCESSION   KCKM01001418
VERSION     KCKM01001418.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 595)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 595)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22418apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>595
                     /note="ultra-conserved element locus uce-4575"
BASE COUNT          164 a          146 c          150 g          135 t
ORIGIN      
        1 ctttcccagg tgacaatgca gggcttagca catggcacga agtaccagcg atcttaacac
       61 agagcagtcg tgcacagcag ctttttcctt ggtgcccatc tgcacttgct ggagctttaa
      121 accctgaccc aaagccctgc ccaaggggct gcacagggaa gcaggaacat cctctggtgc
      181 tgcagtccca ggcacccagc catgtagctc catctttatc cctcccgcac actctctttc
      241 cctctctcgg atggtaatga gtggtttgca ctgggaacta aatgaagttg attgcccact
      301 ggtgtctgcc attagtggta attagttaaa acatcagagt ataaacagta aattggctct
      361 aataattaat actagcactc aagcatatga gagacacaga gactgggaga gaagcagcgg
      421 caagcttgta aaatcggctg gggctgcttt aattaaaaaa gaaggaatgt aagtaacacg
      481 gtattggaaa aaggacaaaa gccatcagga tcttgctcgt taggagcgta gtcgtgtctc
      541 ctctggagcg cagcagggcc gagggcctgc ctcgagtacg tgccactgca aaaag
//
LOCUS       KCKM01001419             653 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22434apa ultra-conserved element locus
            uce-3113, sequence.
ACCESSION   KCKM01001419
VERSION     KCKM01001419.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 653)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 653)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..653
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22434apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>653
                     /note="ultra-conserved element locus uce-3113"
BASE COUNT          183 a          145 c          137 g          188 t
ORIGIN      
        1 gcctcccttc aagggcacat cttcgtttct ttcttgcctt gtgctttcgg caaaacgccg
       61 gggagggggg aaggattatt atttttttcc cccctcttct tttacctcca gcaactgctg
      121 ctttacaacc tgtagagata agacggcctc gcatcagatg atcacagaga taagtaatct
      181 cacccctcgg cccgtggtac agctgaccgt gtgcgcttga atcttagagc gctaagtctt
      241 tcctgtgaat gaacgagaaa acactcgaca ggtcgtgaat aatcgtttta atgagtgtgt
      301 aaaagcgtgc gacggggtgc acggagctgt cgggttaaac aaacaacttg taccctgacg
      361 aaatccgatt gttaaagtgc aaagtggtgt cagtccaatt tccatcccaa ttctaaaaac
      421 cgcagatcta agtcgcggga gtccaatttt ccccattaag aaaaataaca atattttctg
      481 aacgtaagtg cgatcgtccc tagtgttagt ctcggacgaa aaaaggagac cagttgcata
      541 tcccaaaggt accgaagttt ttacttttaa aatattttaa aagaaattag tttaaaagtg
      601 tatgtctgac attttcctac atattctcag atcaatgcgg taaatatttt cct
//
LOCUS       KCKM01001420             865 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22450apa ultra-conserved element locus
            uce-2816, sequence.
ACCESSION   KCKM01001420
VERSION     KCKM01001420.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 865)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 865)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..865
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22450apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>865
                     /note="ultra-conserved element locus uce-2816"
BASE COUNT          255 a          177 c          188 g          245 t
ORIGIN      
        1 gagagcttca agctgggaat ttgatgctag gtctgtactt ctggctcaag cccagctatc
       61 tacagtagga aatgcatttg attttggaac acactttcct ggaatggaat gtcaagaaaa
      121 tacataatca agagggcatc atagataatg agctacaaaa acttgtttgt caccctcctc
      181 ccacaatggc aaagagcctt ctacagctgc taattagaaa attagaacac cacaaatgga
      241 ttatatttta ctggcagcat agcatcttcc ccccagtgtt ttaaagtact ttttgaattg
      301 tttgctgtca gcaaaacaag tgcactacct gcgatcctat agacaacaaa gcccggcagc
      361 aggatttcag tcaggtgatg tcacccaggt aaaattgtac tgacaagctt ttaattaaag
      421 ttttcccaca catctttctg ccggtcccca ggagctatta ttcattatgt gccgactgtc
      481 agccaattgt gagtcgggag ggaagtgttt tattttcaaa gcccttgctg acagctagag
      541 aacactttgt tatacaatct gtttactttt ttcacacaca caatcttgct aaaggggaaa
      601 tggccatgca gtagtgttta cagtttatgg caataattaa atgcatctgg cagggcagta
      661 gctgaaagga ggtcggtgtg ggtgtgggtg aaaagccata aaattcctcc tgtaaacagt
      721 tactctcacc ttgcagagcc tctagcattt taaggcaaag tttctttgag aaagggcagg
      781 tccaagcagg tgcacagatt ctgaaatggg aatatttgaa tctagccatg tggtacttga
      841 tgctaggaaa cactgtccag gaatc
//
LOCUS       KCKM01001421             810 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22464apa ultra-conserved element locus
            uce-3469, sequence.
ACCESSION   KCKM01001421
VERSION     KCKM01001421.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 810)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 810)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..810
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22464apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>810
                     /note="ultra-conserved element locus uce-3469"
BASE COUNT          265 a          145 c          131 g          269 t
ORIGIN      
        1 ttttaacatc tatgaatact tctgcgtaat tcccatctat ttgaaagtac aagaaaaata
       61 gaaattgagc ttaaatactt ttaattgcat tgtatgctgt gttaacttgt gcataaaata
      121 gcaaagcaga taatatttct tgggagaggt ctgtaaaata ctgagcttcc tggtacaatt
      181 tttaaagtta gtagcctatg actgctgaaa taaaatctcc aagtaataac aggtaagatt
      241 tctggcctca tgtatatttc caatgtcact tactaatgga tagtaaattg aaagttatat
      301 cttcagccct ttataaagaa agcacctcac taatactgta atcattctgc aagcctaaca
      361 acagaggaaa tcatgccata acaaatactc tgttactaat ggcaacattg atttctgcaa
      421 tcagccatta agtctagaaa atgaaagaca gtttgaggca ccttaaggca ttacattgcc
      481 cactgttaaa gagctgctag caggctgttg agggtaattc tttttaggtt tttcccccca
      541 gttttgataa atattttagt attggaggca attcactgtt acagttatta agtgtatgcc
      601 agtttatttt tgttgttctt gtcatgctcc agtatactct ccttctgagg ccaaattaat
      661 ataaaaataa agcattagtt tgccggctta ttacaaacca gtaaagaaat tgttaagacg
      721 cataaatctg cactccacat tccacagatt cctatagtac ttaatgctgt tgtttaaata
      781 cccatgaaac acactgtcta ctcttagagt
//
LOCUS       KCKM01001422             750 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22479apa ultra-conserved element locus
            uce-2235, sequence.
ACCESSION   KCKM01001422
VERSION     KCKM01001422.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 750)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 750)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..750
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22479apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>750
                     /note="ultra-conserved element locus uce-2235"
BASE COUNT          240 a          124 c          142 g          244 t
ORIGIN      
        1 ggctctgcgt ggttgcacag tcaggtactg actagttgtg tgtgtctgca agtttattta
       61 ttttttttta actcatctaa ccttgccaca cagagagtgt tggtaagccg cataagggaa
      121 agcatgtaaa actagttttc agttgaatat agctcttgtg ggtaaataat ttcactctcc
      181 tcccccaagt actgtgttag aaacaatatt cagcataaac tgattgtaga gatagtctga
      241 tccttaagca agattaatat gaaaaggcaa gaagtctgca ataaaaccta ctaacttaaa
      301 tcatctgcat ttgtgtacaa gcattcatat ttagcaacag tcccaaggct gagattaaag
      361 ctgtttggta ggttacttca aggccttttt attgctaaat cttattatgt ctttaaaatg
      421 tagaaattaa tcacctgtca tcaaagctac agtggattat tgacttctaa atgtctctac
      481 aaagtgattc atgacagaat gaaacaggag actgaactag cactgaaatt ctttttgcat
      541 gtgataaaaa gggtctatta aaagtgtttg aacaaatgct ggctattagg taatcatcac
      601 aaaggatttt gttatcaaaa tgtggtgctt cttgaataac cttcttcagt tacatagatt
      661 tgcagcgcca atcctctaat gaggaagtta tctggagaat ttagattgtt cacctgaaaa
      721 gcctgaaatt aagtaaattg cagcagtatt
//
LOCUS       KCKM01001423             950 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22494apa ultra-conserved element locus
            uce-4302, sequence.
ACCESSION   KCKM01001423
VERSION     KCKM01001423.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 950)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 950)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..950
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22494apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>950
                     /note="ultra-conserved element locus uce-4302"
BASE COUNT          294 a          195 c          173 g          288 t
ORIGIN      
        1 ttcttaaact cccgcttctg agagagaaag agcgagagag aaatcatagt aatttccagc
       61 catttgtgtt aaaatacaaa gaaaacaaga atcattcaaa aatgatgtgc cgtgaagcct
      121 gattaatatt tatgttgaca ttaatattga taagaatgca ccttatgctt tgttgtctat
      181 ccccagcatc cctaagttcc ctgttattca agctagtagc cattagctcg catcttcctc
      241 tgtacacaaa gcttcaaaaa gccttggcag ggctccagct cacttacgct taaatggaca
      301 ctcaagcttc gatggacaca cagctaaata gacgccaata attcaataca gtatgactgt
      361 actggggctg ctagtaaatc catcaagcag taaatatcat ctgaagccaa tgcaagcttt
      421 tatctttcca attttgtgta tgtctgtgtg aagcccaggc attcagcgaa tcatgtaatt
      481 tattctacag tgctgagctt gggctgtctc agacatcata ttgacttttt ttccatctgt
      541 caggggcagt cactgctctg cttttgtgca aacacatcac attgcgttat ttatttattt
      601 aatcccactc tctagcgcaa ttgggcaagg acacattttc acagatcaac aaatactaag
      661 aaaagcatct gaatatcatt acaacagcat gttaaacatt tgtcctaacc agtttgttaa
      721 atcagcaaat gcatttccag caaacacttg taatggctca gaaaggagtc cctaatgcaa
      781 tgtgttatta agattcctgt tattttcctt cattctttag gtcagcagcc atgacaatgt
      841 aaagaatacc aaatatctgg gcttactgac ttgtggtcgt gtttgagtgg attttcagac
      901 acagtagatg atagagatat aaaaatagat gacgaggatc aggctagcat
//
LOCUS       KCKM01001424            1148 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22508apa ultra-conserved element locus
            uce-7329, sequence.
ACCESSION   KCKM01001424
VERSION     KCKM01001424.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1148)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1148)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1148
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22508apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1148
                     /note="ultra-conserved element locus uce-7329"
BASE COUNT          323 a          227 c          259 g          339 t
ORIGIN      
        1 gtaggctagg aatatctgtg ttcaatatta cagctcgtca gtatgactta attagctcct
       61 gacgtagcat ctggcagtcc agaggggccc tatttgctac tggatggtag aactgacaat
      121 tcctacctct ggtattagct aactccagtc tgcagtagta agtggtatag aggtgaccaa
      181 gatttctaaa atctgtacag ctcaaattga gtcaaagtgt cgtgtgttac agctttctga
      241 gaaagacatg agcatgctgg aggaaagaat aaaacggtca gccaagagac catctgctgc
      301 tccagtgaga caggcagagg agaaacctca gcgtactcaa aacatcagcg ctaatgctgg
      361 catgctgcgg aagggaccag ctgaggacat gtcctccaaa ctcaagtgtg taatgttatg
      421 gtttatagac tgcatagtgt ctgtgctatt atcatgtctg gcgttttttt agttcctgta
      481 tcatcatctt tgcatgttgt gaaaattggc cagataatac agtgcaaaat gtgtgaaact
      541 tttttttgtc ttgtctgtct tgaaaccttt ctaaatggtc ttgtgccttt tttcactgct
      601 tctccatgga cagaattatg tatcgcactt ataggatgta agtactgccc actaactcct
      661 tggtagcaag gctcttgtgc ctttcaattt ctctcctggt catcccttcc tcagggtgac
      721 aggttttacc atggctggtt ctaggttatt tacaggtctc taacttaaat aaaagaaaga
      781 ggcaaaaaat aagggtttct gccacggtgg ctgtggttca gactgcaggc aaatgtggca
      841 tttccacatt aaggagctgt tagaaatatt gacagaactt cctatgtgtt acattaaatt
      901 tggtgttgat tggaccccat tctcacttta ttagggcaga tgtacagcac tgaactggat
      961 gggcatgtgt gaataataga gcctggggca acactagcag gaaaaaaaaa ctcagcaact
     1021 attccttgcc acctgctcat tacattggaa taaaactctc agttgagatc tgtgtataag
     1081 aacacttcct tgaaaaagca aatacatagc acaggtcatc aggggtgctg agaatcatag
     1141 gttcaaaa
//
LOCUS       KCKM01001425            1021 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22522apa ultra-conserved element locus
            uce-5193, sequence.
ACCESSION   KCKM01001425
VERSION     KCKM01001425.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1021)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1021)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1021
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22522apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1021
                     /note="ultra-conserved element locus uce-5193"
BASE COUNT          248 a          236 c          325 g          212 t
ORIGIN      
        1 catgcagtct aatatggtgt gtgtagtcca ttgccacact gttactgatc aaagggataa
       61 aataattaac ttggacacat gattaagccc caaataaagg aaatttcaga gtgtttccaa
      121 ataaacgaca tctcagcata aaagacggta atctggcaga tcagccaggt gacagtgctg
      181 ccaaatccct tccctcccct cttcttctgg ctctgcttta aaaaaccaga aatacatgtg
      241 tagcgacggg taggagatgg tgtggtcctg gggagaagca gagccccatc cccttacaca
      301 gctagcagag agtggagcag gagagcggag ggtagcacgg cgctgtacag ctgcagggct
      361 gctcacaaca gggcagagct cccagagaat gtcctctttg ttccctgcct ttaaagggta
      421 agagaaacac ttatgcatgg caaattagcc caaaaatgta tttctctaaa acacccgatt
      481 gtctggccag ctctgcagct gcagggaagt tccagggaga gaagggggag gcggagggaa
      541 ggagaaggag ggagtcaggg aaggaggatt ttgatgactg gggtggggga aggcaagacg
      601 attgtccgaa tgagggtgaa attctcatgc ctcgattcaa accgacctga ccagtgagct
      661 aggggacccc tgagagaggg gccaggggac cacggatgct gtgcggtctc ctgggagggc
      721 agggagaaga gcggacggga ggcagctgtg cgccagccag cgtgggagca ggcactggtg
      781 tggctggcgg tgccggtggg ggggtcctgc cacccggcag gttcagctgt gccatctgtg
      841 ccaggatgct cagcgagcgg tgccattctc ctctagtcac tgtgttgcgc gtcccggggc
      901 caacgggctg tggcttctct cccgcctcgg ggcaaatcta tggaggtgca gggcatgtgc
      961 tgttcccaag aggtgtcact tgggtttaaa atgtcccaaa tgttcctctg gattgggaac
     1021 t
//
LOCUS       KCKM01001426             734 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22538apa ultra-conserved element locus
            uce-5730, sequence.
ACCESSION   KCKM01001426
VERSION     KCKM01001426.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 734)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 734)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..734
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22538apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>734
                     /note="ultra-conserved element locus uce-5730"
BASE COUNT          219 a          165 c          140 g          210 t
ORIGIN      
        1 cagacaaaca cagtaaattg ttgatatttt cacctttcaa gacaactgtt aaaagtgaaa
       61 taacaaggca gtcctgtctt aggtgtgaca gtttcagctc ctgacacact aagctcttgt
      121 ttgataagct atgttcattt catatttgtg taataccctg gaagaaatta ggttgcaata
      181 aagtccattt ttgtcactgc atgcagcaat gaatatcaca cccagcaggg tacagtggca
      241 cctggctgtc cagacccagt gtagcacaaa gccatctggg ggtaattaca acaaggtatt
      301 ctttaaagac cagatgggac caaggaacag aagcccctac ccctcccagt catttacaac
      361 ataattcctt tcaatgatat acttaatcct cccaccagct acgcttttca gcttgctgtt
      421 gtcactgttc ctttatgtta attcagttga gagacacaga aagggagaga gagcggagag
      481 caagccaccg gtgcctcaag ggactaaaag aaattattca tccttaaatt gtttccacta
      541 caccaagtac agtaacaatt tttttttttt aaagagggct gaaattatcc taaagaaggt
      601 caatgctata gccctgcgca acaccagctg agttttattc agccacctgt tagctaggag
      661 tgttctgcac acgctcatga tgtatttaac cagtttaaag ggtcttttta ttgactggca
      721 gcctccctac attc
//
LOCUS       KCKM01001427             562 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22554apa ultra-conserved element locus
            uce-7774, sequence.
ACCESSION   KCKM01001427
VERSION     KCKM01001427.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 562)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 562)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22554apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>562
                     /note="ultra-conserved element locus uce-7774"
BASE COUNT          144 a          142 c          107 g          169 t
ORIGIN      
        1 cccctcaccc ccaaatcttc gattcatccc ccgcaaacac tgctaactgc taactcataa
       61 aacatatcag ctgggtttat tacttttaac catctttcca attgtgctat aaaataaagg
      121 cagatgccat tttaagatct tattattatc aagggccaac tcctccagca gcacctgctt
      181 agcagcaatc tgcttgttta tagtcctttt ttataggtga cagtttaagg tggctgttct
      241 cctgttacaa agagttcttt aatgcggcag aagtggcacg cacagtaggt gagctccttc
      301 ctttcatcca gttgatattg agaaggggtc gccggttcac ctgtgatttt tgcttgacag
      361 cttcgccaca cacatcaggc tctgccaaat gctccgccat taatttatga tttaaagtaa
      421 ttaacttttg ctgattaaag taattatttc aagtgcattg cactcaggcc caaatgatgc
      481 acgcagcccc ctctccagtt tgagctagca gcatgccaag tgcttaaaag ctgcaccagg
      541 gagctcgcgg tggcttctgt ca
//
LOCUS       KCKM01001428             417 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22569apa ultra-conserved element locus
            uce-1675, sequence.
ACCESSION   KCKM01001428
VERSION     KCKM01001428.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 417)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 417)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22569apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>417
                     /note="ultra-conserved element locus uce-1675"
BASE COUNT          129 a           70 c           81 g          137 t
ORIGIN      
        1 taaaacttta atttatgaaa aaaatgctag cgtggtcccc aaatggttaa attccactcg
       61 aacttttcat tttagttagt catgaatata tctaacatac agaggccatc agcatctcgc
      121 cactagagac tataaagtct acttacatag ggttcctggg atttttcatg ttcttatgga
      181 aaatatctct gaaatccctg agctgaaaat tttgatctca tttgtggatg tgagtgatgc
      241 tgagaaaggg ttgaagagtg aagagaacac ttttctcgca taatttcatt tgtcaggaga
      301 atcttgccgc tgacattgga agagtgattt aattgatttt aatcatacac ctgagattgg
      361 gaaattgagc cctctgtcct gaaaaataat tctaggcttc catgagaatg tctaatt
//
LOCUS       KCKM01001429             730 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22583apa ultra-conserved element locus
            uce-291, sequence.
ACCESSION   KCKM01001429
VERSION     KCKM01001429.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 730)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 730)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..730
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22583apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>730
                     /note="ultra-conserved element locus uce-291"
BASE COUNT          198 a          163 c          168 g          201 t
ORIGIN      
        1 gagacgcttg cttggtgtag gcaacgctaa tattatcttg gctcctgcta acaggacaga
       61 aaagctgctg ccatgtgggc aagtgagtaa aatgaggcag caggaggtcc aagtgcagga
      121 tggagtctct gtcaatgctc catccactcc ccatcgcagg gagcaacagc ctcggtgcac
      181 gccctgccga ggagacagcc caaccgagcc agagccgaaa ctccatgcag ctctctaagc
      241 ctgatggaga cacataatga aatacaatcc tgtcaagctt ggcccctggg taacattttc
      301 acttctacat tccattttca gtttaggtcg agatttttaa gaagacagca agcagcactc
      361 cagtcccagg tgacaagatc tgctcagatt tagtctttga atgttgcaaa ttaaattccc
      421 tcatcaggcc tctaatcact cttaccagat ggggcttgtg ctcaattttg gatccacagg
      481 aaatttaatg gttattgttt ctgtttaaat aggagattat tgcattttaa taagttctct
      541 ttgggacttg cagcaacaat agagcactat gaattactgt agatagctgt tactgcatgc
      601 tggggaaaaa tcaagttact aagtgtgaca agttgctttt tcttcccttc cagcaatcgc
      661 tcggagtgta tttaccacca aattaagtat gtgccgtggg gataatattt ttatcctgcc
      721 gaggggggaa
//
LOCUS       KCKM01001430             743 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22599apa ultra-conserved element locus
            uce-7249, sequence.
ACCESSION   KCKM01001430
VERSION     KCKM01001430.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 743)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 743)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..743
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22599apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>743
                     /note="ultra-conserved element locus uce-7249"
BASE COUNT          247 a          159 c          113 g          224 t
ORIGIN      
        1 aaatacttac tactagtacc atgacagaga gaattaattt cttagatcaa aacactacat
       61 atttatagaa atagattaga acatgctaca tcagtcctag tttgatgtct tatctaattg
      121 acctctaaag tgacatcttc catctcacag gctggcccgt gctatattca tttatttcca
      181 tcttacctaa aattatgatg aatggtcaga gctccattca attattgaaa atgtgcaaag
      241 aaacagaaac aatgaaactg gcaaagtgct ctgcattctt aggaacaatt taggctaatt
      301 agcatcaact tctcccccat tcatcatacc cctttagaaa tataaacaaa ctgtcagctc
      361 taacctaaca aacagatcac tgagctactt aacacaaatt attcttacat gaaaagctcc
      421 ttctcaggca atattctcct ctagggcatc tgggaagctg agctattaaa attgaagaca
      481 tatgtttcag tcaaacttaa ctcccagatt gtagtgattg ctgttgtgac agttttccat
      541 cagcatgccg ctgctggcaa tgcactacat atttaaacaa agagatgcaa caatagactt
      601 caatgatgca tgttcattta gtacagtatc aataccaccc aattagcatc ctacacctac
      661 aagtggagct attaaaatta ttgcctaggt acaactcgaa tctcagattc catgtggggt
      721 ttcttttgga actgcaagtt ctg
//
LOCUS       KCKM01001431             687 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22615apa ultra-conserved element locus
            uce-1520, sequence.
ACCESSION   KCKM01001431
VERSION     KCKM01001431.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 687)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 687)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..687
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22615apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>687
                     /note="ultra-conserved element locus uce-1520"
BASE COUNT          244 a          103 c          124 g          216 t
ORIGIN      
        1 aatttatata ttttccattt ttataagact tcatacactt tgtttcagta gaaacaatga
       61 ttcatatgtg aagaaaaaaa attaaaaata tattttcata aaaaaggcac aaattattga
      121 taaacacatc tatttttgca gattggttat ttctcagagg ttatttgggg tcataattgt
      181 aaatctcatt acgttgcttg aaggagaagg tctctttcat tattacggtg ctgaggtcca
      241 tatccctgaa gctaattgca agatattgct tcagagttct aattgtttgc catcaaaata
      301 gctgtgtaag cttgattaac agtgttcagc aacattcata atagtccaag cctggtcctg
      361 cataaaatag aaactgggaa aaaatcaata agatttaata agatcaggaa caatcactta
      421 caatagtaca tcaatcacac aaagtaatag gtgcaggatt tgatagggtc ctgaactgcc
      481 tgagagattc ataaccagta ctcgttaatg atttgttcat ttgcatttta tcaatccagc
      541 tacagctgac aagcagaagg agcagtaagg aaatatgttg acttagagtc atcagagttt
      601 gcaattaaaa aaataacggg taacttaaca gaaaaatcag acacagttgt gaatgcagac
      661 tgtgtatgtg tatacctgtg tagatgt
//
LOCUS       KCKM01001432            1062 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22631apa ultra-conserved element locus
            uce-1410, sequence.
ACCESSION   KCKM01001432
VERSION     KCKM01001432.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1062)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1062)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1062
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22631apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1062
                     /note="ultra-conserved element locus uce-1410"
BASE COUNT          305 a          246 c          219 g          292 t
ORIGIN      
        1 gtaaggctac cgacattgag agtttacctc tgccaggctt attgcttttc taagaaggtt
       61 tttccaggtt tggctccagc tgcaatacac tgatgcatat atatgtcggc caatatcctc
      121 tcaaaaacag agtggctact gtaacatcat gttaactcag tcctttttgt agcatgctcc
      181 cttggaacat agtgacctga atttaagcat actgtgtttt agtatagaaa agttacatct
      241 cacaaaagaa tatctgactt tataaaccta ctcaaagcct tttactgaag agggaattct
      301 tggtttctgt gaaattgata gatttaatga atatattcct gttataatat gacatctcat
      361 ttttctctct cataaatact tgtcaggttt atgatttttc actcattggc caggaatcgt
      421 gttgcacaag ctcaggttgt gggtgctcat accaagttta atttcactca caagtagagt
      481 tgacaaaaga tcacagccac taagccctgg aattacccta gatattgccc tctgtgctct
      541 gcaaatgaaa tcctacagaa gaccctttgg aaaagcagaa catgatggtt aacactcaga
      601 aatccatttt gcacagggca gcgtcagtac acagagcagc acggaatgac aggcagatct
      661 gccagttcct ggatgagaaa agtcagatgc tcagcattgc gctctcgctg tttgcccgtc
      721 gtgggccctt cctctcccaa tttcttcccg ctcctctctc atgcccttga ttgactacca
      781 ggtcagataa gaaattaaga ccggtgaaat cggaaccaga tggcacctgt ccccggcgca
      841 gccaggagag aactgaaata aagcacttac gaaactgctg tgatcgtaac cttcaaaacg
      901 ccaaaccccc ccagctgtct gctctcacgg agcagggcac tacaatgggg agctgggcaa
      961 gaaggcccag caagctattt ctaatgaaat gctgtcactt cgggaaaggc taaagtagtc
     1021 tgcagagtga agacctgttt ttagtaacaa agcttctgaa aa
//
LOCUS       KCKM01001433             712 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22647apa ultra-conserved element locus
            uce-7503, sequence.
ACCESSION   KCKM01001433
VERSION     KCKM01001433.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 712)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 712)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..712
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22647apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>712
                     /note="ultra-conserved element locus uce-7503"
BASE COUNT          218 a          145 c          116 g          233 t
ORIGIN      
        1 tttttttaat agctccacac actgaaggaa acatttcaga aaaaaaggtc ataatgtttc
       61 tctattcttg cttcaggcac ataaatgtta tttcctctgc aatgtcatat attgaccatc
      121 tgaaacttga taaatcagaa gatagattgc agtggagctc tatgtattta agtatcaagc
      181 tgatccataa ctttcgcatc aaccaaaagc catttcttgt cagtgctgtc cagaatatat
      241 cctgacagtt cagtgggagt ttcagtgcca tttattttca aatcaatact caattactaa
      301 gaggaagatt cactcccttg cccattttca agatgaaatt atggactaga gcaataacac
      361 ttagtcaagg caagccactg tccattaact catgatgcta ccaaaacccc atcccgacac
      421 tttattaaag ctcagtcttt tttcagcttt taattaatca ttgtgaaaaa ggcctttcac
      481 attgtgactg atgaccagag aaaacaattt tctcctaact gccttttaat ttcaactctg
      541 ggagtgctca ttgactgaat ctcacaacaa cccatcaatg ctaggtttta atgtgttttc
      601 tcctttgtta ttgagaagaa tggagtggca atgaggcttt gtgctcctct tcataactca
      661 agtaattgat tcagtaaatg ctgcacattt gctagtggat aaaaagtgct gt
//
LOCUS       KCKM01001434             518 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22661apa ultra-conserved element locus
            uce-3129, sequence.
ACCESSION   KCKM01001434
VERSION     KCKM01001434.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 518)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 518)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22661apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>518
                     /note="ultra-conserved element locus uce-3129"
BASE COUNT          154 a          105 c          120 g          139 t
ORIGIN      
        1 aagtgatcct ttaagtgtcc ccatttgacc aactttgaga ggcagcagct tcctgagaga
       61 gttgaagcaa tgtttgccaa tccttgtaaa gcatttcacc tcttcagagg ctaaagcctc
      121 tcaaaaccaa gaacaattaa agcgagagcc tttcagagcg gctggggaat tcagcaaaat
      181 aaatcagaaa tcctctgccg tggctctgga ggcttgcctc attataagag cagatctatt
      241 agcccccttg ccattgtctt tcatttctca agtgaggtga ttctaattaa attaatctgc
      301 atgtcaatct atcggtgatc aatcaaaagg gctgaggtcc ccctttgcgg cagtgtgctt
      361 gcggctgaca ggggctgata atggaggaag aaataaactg tcgagcaaag ttaattagtc
      421 aacataatag gtggattaaa caggagctgc tgattgctgt ttcacatgtc gaagcatgag
      481 gtgggagctg aaactgcaat taacagacaa ttattata
//
LOCUS       KCKM01001435             962 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22677apa ultra-conserved element locus
            uce-5694, sequence.
ACCESSION   KCKM01001435
VERSION     KCKM01001435.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 962)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 962)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..962
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22677apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>962
                     /note="ultra-conserved element locus uce-5694"
BASE COUNT          287 a          214 c          192 g          269 t
ORIGIN      
        1 ccctgctgct tcctaacaaa caaagaacat ccagtgacag ggctctgaaa atgtattaca
       61 ttttagattt tcctaagcac tctcaaatct ccttatcttt ctcctatcct gctcagatct
      121 ttctccttcc tccatctgta aaaatatgtg taaaccttgc ctaccctcag cagtgtatca
      181 cagagtccat ccttgaagct gagctgcaaa tctgcacatc tcagctgtgc tgcctttgga
      241 ggcagttaga aaataaacag ataataaaaa aaaaccagtg tccaggatgc tgctccagtc
      301 caagtgaaat ttgttccttt tgagctaagg gtgcaggtct cctgcacgat cttttgcaga
      361 ataactgaca agaacaaagc ccacaattat taacctttcc acttcttccc atagtttatt
      421 gtgacaagac aatgcaataa gcttgaggta atcaaaaagc aattttgtag tagtgagctt
      481 aaaatgacaa acctttcctt ttctaaataa atcaccatta ttcccacatg gtccatgctt
      541 gacaagtttg tttccttagt aacagagtac ttaaacaggg tttgtgcgca cagattatac
      601 ctttagccac agaagtgaaa gaggagacaa taggacgaaa agtggtccag ccccgaagtc
      661 tgtgatttaa atatttatca gctgggtaat ggcagaagac aaagatctgc agaagcccag
      721 gtgcgcctgt ggcctccgcg tgtttcgtgt gcttagcgga gtctctggac tccgaggggg
      781 tttcaggcta tggtgcctaa actgaattta acactccctg atgtttgttc aatagctcac
      841 ctaatgttga ggtcagctgt cttataaatt attgagcaga ttaacagtgt taggactaca
      901 atataaataa agggtgtgca gcagacaaag cagacacaca gcgtgtctgg ctcaaagacc
      961 ga
//
LOCUS       KCKM01001436             509 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22691apa ultra-conserved element locus
            uce-114, sequence.
ACCESSION   KCKM01001436
VERSION     KCKM01001436.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 509)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 509)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22691apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>509
                     /note="ultra-conserved element locus uce-114"
BASE COUNT          138 a           95 c          111 g          165 t
ORIGIN      
        1 ctctggatga gttctgcatt ttcaatgagg ttaacttggc aacattctag ttgattttaa
       61 taaaaatagc tgctttgagg acagggagct gaggttgcca aatttacagc tgccttgcac
      121 aattactctt acacctcctt cagggctact tagaaccagt aagcaaatta agtgtatcga
      181 ttgcaatttt gttggactaa cccttttttc ttaaggaata aacttgattc ctttcagtat
      241 gtgtctgctc agagtgatct cttttctttt cagccataac acaaagacaa catcatggct
      301 ggatccacga cttgcgaaaa aggctaaacc tccagaagag tgcaaagaaa atggtaggtt
      361 attaagtttt cgttgctgct cagaggggat ttgcctttgt gtgtgtgtct ctcgctcagt
      421 tcttgcaaaa atcaggcatt tggcggaatg atgaaaggtg tttaattgct gctttggtta
      481 gaagccataa gtgataccag ttctcagtg
//
LOCUS       KCKM01001437            1140 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22707apa ultra-conserved element locus
            uce-4843, sequence.
ACCESSION   KCKM01001437
VERSION     KCKM01001437.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1140)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1140)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1140
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22707apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1140
                     /note="ultra-conserved element locus uce-4843"
BASE COUNT          346 a          262 c          241 g          291 t
ORIGIN      
        1 aaaaaaccaa acaaacaaaa aaaacccaaa cacaccacca caaaacacga ccaccactca
       61 ctaaacaaaa agagggacac tacagataat acaggatcag ctcacataac agcattttaa
      121 ggtcaatatg caagtggcta agcaatatat ttctatatat tcttctgccg ctccagaaat
      181 caaaatatta ggactctctc gttgtgacaa gtggtgcagc gtcaatgcta gaatgcgttc
      241 caaaacgcag gatctagctt aatgagatat ttatagggct tttggggaaa atgtctgaaa
      301 tcacacgtct cttccagact ttaaactctc tacagagagc tgcaagatag aaagcctcta
      361 aataggctac gttgaagaag tattgtgcac ttcccctttg aatcgggagt tgcagcctct
      421 gtctgtgcag taacttgaca aatattagcg tgaactacta aggcagtgtg acaaccgcat
      481 gctgagagca aagtctcact aatgtgtttt ggcatgcagg tttgtaatca cacatttaca
      541 tatgcaatga cctacatttg catgtcagat cacacactgt cttgctttat taagaccggg
      601 cacctccctg tgcttggcgg ccagagtggc gagagagggc cagagggcgg tgttttttgg
      661 cagttgaggg atgaactgcc accaaggatt aggctgatat ggcctgagca ttagacactt
      721 cattagaggt aatctgttta acagtgggca gtgtatgtaa acttcacagc ccatttgcgg
      781 caccttttcc cccccatggc ctttcttcaa agggcagcgt ggctgagtga cagcttgtct
      841 catctgctcc cttgtcctgt catacaattt agatgtggag agctgacatg agaagcaaca
      901 tagctgcaca tctccaacta ccactgcgtc tctcctcgcc acaatgcaat ttgtagagaa
      961 taagcttgtg cgggataaag atttccttca gtccgagacc ataacggagc agattatatc
     1021 cacttcacta atgatcacat tacgctgtag ccaccgagta aatcagcgag cgctcggaat
     1081 attacagttg tttccacaga agagataatc tagcttgcaa tgttaaaata accaacgagt
//
LOCUS       KCKM01001438            1057 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22722apa ultra-conserved element locus
            uce-5077, sequence.
ACCESSION   KCKM01001438
VERSION     KCKM01001438.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1057)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1057)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1057
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22722apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1057
                     /note="ultra-conserved element locus uce-5077"
BASE COUNT          336 a          250 c          184 g          287 t
ORIGIN      
        1 ttttctctat atttgtcttt gtgaaggagg accctggaag taaccttttt ctcccttcat
       61 attaaacatt tgatacagta caatgccagg tgaaaagaga gccttaataa agcatgcatc
      121 acccataccc ctgtataaga ccctctgcaa gagaaggtca cttgcataag gcaccattat
      181 taaggtcaac agtgcattaa cagctagaaa accagaagtt agtcctcaag gcataaataa
      241 gagaaaaatt agctgcatga gaaaaatcag tttctaacca gtagtggttt tatccaccca
      301 acagaaaaaa ttattcatgt tccatacatt atgtaacatt agaccaattg tattttagct
      361 gctcttaact ggaatcaaaa ctgcagtcct gattaaagaa tggaaaagca tatagttccc
      421 cagaaccatg caataacctt tgtattataa tgaaaagtta tagttgtgtt acatttgtaa
      481 atacacagct tatacaatgg attacaaatg agctctgtag caagtaaaac aagctacttg
      541 acacattgca cgtttaatag ctgcaccaga cacctaaagc tcctctcaca caggaacagg
      601 gaggtcccca ttctggcatc ctgactcttt ttgttccctc ctttcccctc tctgtttttc
      661 ctctaaaaag gtgcagacac ccctcccccc accccttgga aatgattggt ggtcgtccca
      721 tctcacgaga tattcctcac atacaagaca ttcagacttt ttttttttct cttacagtta
      781 taaaacaacc acaagaaaaa aatgtgcctc agcatacagt catcaagaga tcctcatcgc
      841 atacagtcgc ccaatcatta acattctcag tgcacatgct cacggcaaag gcttaggagc
      901 cactcagaag gttagatacc agtgtatgtg tccaggaaac cccaaacatc acgcaccgcg
      961 gttgctatgc cgtttcttac atgacttatt agccctcaaa agaccttcaa ggaagtgagg
     1021 tcctggaggc aactgggtag ggtgcaaaat ggcatgc
//
LOCUS       KCKM01001439             281 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22738apa ultra-conserved element locus
            uce-3561, sequence.
ACCESSION   KCKM01001439
VERSION     KCKM01001439.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 281)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 281)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22738apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>281
                     /note="ultra-conserved element locus uce-3561"
BASE COUNT           74 a           56 c           72 g           79 t
ORIGIN      
        1 ttttttcctt ttcatcttgg ctttctgttg cagaatgcaa atgtagcctg ccggcggtga
       61 atgggctgaa ttgtgattaa gaagaagaag agctcctttc tttgttctcc cctcagggga
      121 tgtttactgg gagagacaca gcggatcaga tatgaaaggc attcaggtca gcattgatgt
      181 gagcgaaagt gaaatcatac ctaaggcatt caaaagaccg ccgtgtcagg ggttcagcta
      241 acggtgcatc tactgtgtct tccctgttag gcacaaaaaa a
//
LOCUS       KCKM01001440             927 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22754apa ultra-conserved element locus
            uce-7120, sequence.
ACCESSION   KCKM01001440
VERSION     KCKM01001440.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 927)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 927)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..927
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22754apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>927
                     /note="ultra-conserved element locus uce-7120"
BASE COUNT          255 a          252 c          237 g          183 t
ORIGIN      
        1 aaagaaaacc tcaatgaaat aacggagacc tgctgccgtc agcaggttct ggatcaagcc
       61 caagaggaga gggccagcga ggttttattt gcctcccaca gagcaccagg aggagacctg
      121 gaaagacgca ggagccccag gagaagggct ctcctcttcc ctccacccgc cagcgcagcc
      181 aatcgagccg agacaggagg tgaggctcga cagcagtaac tctgccaact tgaaggaaac
      241 gtcagggtct ggagaatttc ctcacgtgtt tccaatgtgt tttttatgca ttttattgct
      301 catctgccat gcagatcaaa aacgctggag ggattccaac tatttcacac agaatctcac
      361 actccaggct ggctgcagcc ccaaagcctg agtttcttca cttgaaatac tgcccagtgt
      421 tattttggga tgtgacctga tagcggaagc ccacggggac cctgaaacga taaccgttcc
      481 agctgcaatt ggttgcccaa cccgcgccgg tgccagcatg ggtttgtcag tactgctgac
      541 aaacacgggc tcagcagcta acacctcctt ttcacaccac aacaaaacca tgcctgaaat
      601 cacacaatct ggtacccaac ggagggggca ggggagttca tctctcgcgg ggaaagggtt
      661 gcaagtcctg gcatgaccaa cgcaagggag ccggttagtt tatgccggga ggcttcttgt
      721 acgtcaaaag aggaaccacc acttcactat ctgatacgag ctcgtttgtt aaagatgaaa
      781 caagaagaaa tacttgagat caaggtaaca aaagcccgga ggagaagaga ctcaaggctt
      841 cgctccagcc catccgaccc ctctggaaga gcaggaagac tgaccagaaa gcaaagagac
      901 ctcctggctg ggcactcctc tgcccgt
//
LOCUS       KCKM01001441            1146 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22769apa ultra-conserved element locus
            uce-5994, sequence.
ACCESSION   KCKM01001441
VERSION     KCKM01001441.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1146)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1146)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1146
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22769apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1146
                     /note="ultra-conserved element locus uce-5994"
BASE COUNT          327 a          214 c          230 g          375 t
ORIGIN      
        1 ggcttgccaa gcctataatc tgacatttta ccaagtagaa taggtgattt ggacacactc
       61 tttggtggtc tcacattggg atttcacatt actctagtaa agaaaaagta gattgaggta
      121 ttttaacagt catgatgtta gtcaaacctg attaacagat tattttcaac tgacatcact
      181 tctttttttc tatttacaag ttaaatagcc cagccactcg attgataaat gttccttttc
      241 ctccatctta attaactaaa tattctttta cttaaacaag acctcatttt tccatagaca
      301 tagtaataga tccattacca gggtctgtct gagatcaggg atcttttatt tatgaggaca
      361 agtccaaacg gttactattt tttaatgttt ttattttcct tgatactgta caccgtgtaa
      421 tggctttggt ccaaacagtc atcacacaat ggatgctgtt ccttctttcc tgacctatca
      481 cactccacat gatttaatcc attgttttgg atgttgctga tgatttattg tacaaaaaat
      541 gtaaatgatc tggatggcag atgttttata ttttctgacc attcattttc agtgggaatg
      601 taattaaaat ttatgaagtg tatctgctga attgcattgg caattgatga tctcctccag
      661 tgctgtctgt ctggagatga tgagtgattg tggacagtga gatgtgttga caagggcaga
      721 aacagacgtg atgttactgt catgagtgag gctacctgca aaaaggctgc tgtgtttttt
      781 ttcttccttt ttttcccaca ggaagaaggt ggcaaccaga gctgtctttc ttcttgcaag
      841 acagagtaca aagtctctgc atactcctga atgctgtcac tctctgcaag ggcaatctct
      901 gtttctcgca gcaatgggca tctggaagcc acggtatcac ttagaacaat ccatgtcaag
      961 gatattaatt aaattcctga tggccaccca gagaagctaa taagtgtaaa tttcacaaca
     1021 tcccaactca taaggcagca cacttaacct tttcagagtt gatatccttt ctccaggagg
     1081 gaagtgaagc agtgagtgcc aagggaatgt ggtaaggagg aaaaaggaaa ggaggagatg
     1141 cttggt
//
LOCUS       KCKM01001442            1161 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22784apa ultra-conserved element locus
            uce-2851, sequence.
ACCESSION   KCKM01001442
VERSION     KCKM01001442.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1161)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1161)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1161
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22784apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1161
                     /note="ultra-conserved element locus uce-2851"
BASE COUNT          291 a          215 c          286 g          369 t
ORIGIN      
        1 agatgtggct ggttttgggg aggtgctggg gtctcctgcc acgcttctct ccaagagcag
       61 gacttgttct gtgccatgag ttggcttttg ctgagggcct tactgcagcc cagggctgcg
      121 ctagggatcg gctctgccgg gcggggagaa gcaggcgttg ctagaagaga gcgtgtgctc
      181 acgtctctga tgtagagaag tgtcctcgtg gggtagggaa gcaaagggaa aatcctctgt
      241 gggttgtaca gcgggagggt tagtgaatgg aacaacgggc ctgtctccag ttactggctg
      301 taatttctgt gccttggaaa aaatatttta aaagctagtt agctaaattc agatcagttc
      361 tgtggaggta ccaagttgtg cttctggaag gtaaaactgc tttaattgtg aaatgaacct
      421 gccaagttag tgcagatctt taatctctgc atttttcttt ttttacagca agcaaggatt
      481 tggcacagac atcctatttc atggctacca acaggttgtt atcctgaacc tctttgttgc
      541 actgttgtag cacactatag cttcctttac tgcagggccc cctccatgtg tcttaccctt
      601 gttgcaacgg gagactgggc catctacagt ggtggtacct tcctgcttgc agtgcggtgt
      661 attgtacaag ggtctgatgg cacaaagggg ttaaatgcac aatgagaagt gtagtggtgc
      721 tttctgatga catttttctc gattgtgagt gcataagtct aaaattggta gcctgaatag
      781 cagctaaaga ttacaaagag ctaaacttaa cctagaaatc cgagcatctt ggtaagtaca
      841 aaactatttt tagtttacac ttgtagttaa tggcagtttt ctcttaactt taaatatatt
      901 gatccagtat taacttataa aattgtagtg ggcctaagac cttttcagct agctgatttc
      961 agatagacta gtagttagtc caatgttctt ccttttagaa acagctcttt aatctttata
     1021 tatagtttta aaacttaagt acttacgtaa gtttaaagtt ccaggattcc aaacggggat
     1081 tgtgtgtaca tagcctgttg tagaaagatg gaatctgaga gcagactttt tagtcttggt
     1141 ttcttcgttg cttcaattta c
//
LOCUS       KCKM01001443             762 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22815apa ultra-conserved element locus
            uce-2118, sequence.
ACCESSION   KCKM01001443
VERSION     KCKM01001443.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 762)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 762)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..762
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22815apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>762
                     /note="ultra-conserved element locus uce-2118"
BASE COUNT          243 a          151 c          120 g          248 t
ORIGIN      
        1 atacacaaca aaccataaaa gatttcagtc agcatcataa atcatgtaaa cacaaacatt
       61 caaattaaat gtagttgtag tgcaataaac accatcacat ctcccttcta gggacatttt
      121 ttgatgactt ttttgtgcta aaagcaacat gtccatgtta tttaattaat atctaggctc
      181 aaagatcacc ctttgcttta atttgagaaa agaaaagcct tttttctgga ttaataaaaa
      241 tattaaacgg aaaaactgta gaacagaaag gccatgggtt gcattttgca caggataggt
      301 tctggttgaa tgagatctgg gatgtgtgcc aaattaatag aaaaaatcct gttcttcctc
      361 tccaatagcc acaatgttca ttattaagaa aagcatatga accacaggat ttgattttaa
      421 taacaccaat gtcttcatta atctgtactt tccatttagc ctcattattg agtaaatgct
      481 gagttactgc agtacctatt attgctggat tttccatccc tcctttcctg cttctttttt
      541 ttatccattc aaggactatc aggtgtgtgt gtcatgtttt taaacagacc gtccgctgtc
      601 aatggctgtt ttcttacccc aggtctatgc agctactgca gtaccacatg gtctacaatg
      661 ccaatagtag caagaaaacc cctaagaaaa caaagccttg ataaaaccac tcctaagtca
      721 aaaccatatt tgttctggtg ttgttttaaa cgctgtcatg tt
//
LOCUS       KCKM01001444             664 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22829apa ultra-conserved element locus
            uce-2820, sequence.
ACCESSION   KCKM01001444
VERSION     KCKM01001444.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 664)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 664)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..664
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22829apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>664
                     /note="ultra-conserved element locus uce-2820"
BASE COUNT          203 a          113 c          134 g          214 t
ORIGIN      
        1 catccatggg catttgagtc catccactga atcctgtggg gctgattgag agtttatatt
       61 cattttattt tgctactttg acttctgttc ttgttcagtt tatgcatagc tgtgatattt
      121 actgctttta gtttgagagg agaaaaagca gagtaggttt gaaccaaagt atcggtcttt
      181 gcaactccgc aggagaggag atttgaatac agtaaattac gagaatgttc ctcagatgaa
      241 actgtctccc aatcataagt catgtgacga taaatttcag ttgagtgaca acaatattaa
      301 caaactgaaa aagagattga tgtgcatcac aggtccatga atgcaaaata aaagggaaag
      361 gcttgctagc ttgtgatagg caaagtataa atatgtatca cttggttcta aagtgagtta
      421 tgattacatt ttcctacttg tacctgaaat ctgtagaggt tattcatctt atccctatat
      481 cagccctgac agttatagcc acgcggcaca tacggcatag atacctgttc actagataaa
      541 tcagcaggca tgaagggacc tgttgttatc aatttgatct tcagaataaa tatacaaata
      601 tgtgtacagt attgttgtca ctgagaacaa tttcccttct tcttgctgat acatttttaa
      661 gagg
//
LOCUS       KCKM01001445             762 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22844apa ultra-conserved element locus
            uce-4900, sequence.
ACCESSION   KCKM01001445
VERSION     KCKM01001445.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 762)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 762)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..762
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22844apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>762
                     /note="ultra-conserved element locus uce-4900"
BASE COUNT          271 a          118 c          131 g          242 t
ORIGIN      
        1 ctgactgtca tatctaggat cattactgag ataactgttg tagataatgt tccatttgct
       61 gaagttcttg attaccaggt gatagaacca aaaagaagga accaaacaaa accagaaaac
      121 aaaagggcga aataaaacag gagagaaaat ggcctcgcca tacatattta atgaatcagt
      181 gaaaatatcc tgcacaaaga cttacagagt taaattgaaa atgtgtgtat gataaatgga
      241 tataatactg tctatgtaat gggtttccta tttaaatttt gtgaggattt aatcagttgg
      301 gcacagctgt gcaggatgca ccataaacta tgttgaaaaa tatgtagaca tgtacattta
      361 tctgctacaa attaagctca cttagaggtg gtcttaatgg accatgtagc gatcattaca
      421 agcataaatt ttaaactatc tgtttccagt gaatttgctt tgaaaaaaaa ttaatgctca
      481 tccttagtgg agcacagtaa taaatggaag tacctttaat ctgttaagca ctaataacct
      541 agcaattatt cattaggaac cccatgctgt ataatgtatg tctgttacaa ttttattagt
      601 gattctttac ttaacctgca aaggtataat ttttatttca acatacaact tgtaattata
      661 tgatgcttta agtgacacac cattaaattt acagaatgcc ttgtcccctt ggtttattgt
      721 acaacatctg tacagtaaag gattaaggat agcaatcatt ta
//
LOCUS       KCKM01001446            1689 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22858apa ultra-conserved element locus
            uce-457, sequence.
ACCESSION   KCKM01001446
VERSION     KCKM01001446.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1689)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1689)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1689
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22858apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1689
                     /note="ultra-conserved element locus uce-457"
BASE COUNT          478 a          367 c          341 g          503 t
ORIGIN      
        1 gttctcagta cgagagggag gggggaacaa agaacaaaaa agaccatcgc tcgcatgcta
       61 atttagcaag agtaacctcc ccgtggcagg aaaaacgggg ccgaacgaac ctgcgggatg
      121 acaggcatca ctgcaagggc ttctgctaac accagcagca aaaatacctc cccaaaaccc
      181 taggaaaagc tgaagggact cgggcccctt gttctcttca cagctatcgt gttaaaatgc
      241 tcttctcgaa acaggaagga gtcctttctt attgttgctt tcgatagtgt aatatcagaa
      301 gtgtgaccac agtaaatccg cgtgttagat attgaaatgc catcacattg tctaacttcc
      361 cttctcgtct tttttaacac aaagtatttc tttttcttta agctccaagc cctcatcttt
      421 gtgtctgaga tgctctcctg tctgacaaca gcaatttaga agagttaact tttatcgttc
      481 attctgctgt gtaactttcc ccttcaaatt tctttatctg ccctctgagc tcatccgaac
      541 tttcatgttc tcccagcatg caggcttgca ttcaaaacta tgtctaatag accaaataag
      601 aggttaataa gaagtggcaa cagaaagaaa aaatacaatc cctggtaact gataagaatg
      661 acagtggcag ccctttattg tttgtcttca aatatagagt taaagatctt taaaaaacta
      721 aattttgacg cctttgaaaa gaaagaagca caaaataaca acagggggtt attgcctgcc
      781 agccacaggg gagaagctcc ataattctta ttctcccttt tgaaggctgt tagaaatctg
      841 attcaaaaaa gcaacagcag aaggagaaag cctcttgagg ctatcgccat ttcctgtgat
      901 catgcataat gcgtttcaaa agtgggtttt taccaattct gttgatcaat tgcacctcct
      961 tcatattccc tcttttttct gctgtgttta catctgatgt gactcaatga caagcgctgt
     1021 ctgagactgt gaaacagacc tgtcatgttg atttatgggc gcatcaaacc acgacttgtc
     1081 caaactgaag ctcgcagttc attaattaga gagttgtgac tttgaagtca gctttcagac
     1141 tgtggttttt aacatttggc ttaatttata tgctcttgaa tgtggatctc taaggaaaaa
     1201 actgaaattc ccttcttgtc tttgaacttc ttttgaccgc acaataatca tttctttgtc
     1261 cagagtgatg cctgcatccc agagtcatta acgcgcattg aactgccact gatgagtaag
     1321 ccctactgaa ttagaaaaac agccagcaaa acaaagctga gagcattctg cacagtgata
     1381 tctcacaatt acatgccttc cctccctgtg ccatttccat tttaattact gttagtcctt
     1441 tagatttaca ttttagacac tttttaatct gttccctttt tattatagtg gcgcccgtaa
     1501 gcgcgctatg gttaaggttg tgtcagcgtt tccattaaaa acccccttat tttcaggggt
     1561 ttataactca gctggaaaaa ttcactctgg gttaaaactt ggcacaggtg gcacgatttt
     1621 gccgaaattt caaggaggct gggggaggag gaggagggca gaaattggtg tgtgcttcga
     1681 gcggcgtcg
//
LOCUS       KCKM01001447             300 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22874apa ultra-conserved element locus
            uce-3646, sequence.
ACCESSION   KCKM01001447
VERSION     KCKM01001447.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 300)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 300)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22874apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>300
                     /note="ultra-conserved element locus uce-3646"
BASE COUNT          103 a           51 c           63 g           83 t
ORIGIN      
        1 ggggagcgtt tccagcagct cggcaagaga gacaggctcg gtgttcagga gttatatcat
       61 tctttatatc atcgttaaga gtagcaggta ttgatgtaca atgcatctgt catcttattg
      121 tgcttcctat gaaaatgtgt gtacatagta cagataccag agagaattca acactttata
      181 cacttgaagg cattcagaga tcagtaacag aaaaaaaaat ggcacaagaa caaggcctaa
      241 atgctactag atggctatct acactgatat gatgcatata gatatatata tatgtacaca
//
LOCUS       KCKM01001448            1037 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22888apa ultra-conserved element locus
            uce-1415, sequence.
ACCESSION   KCKM01001448
VERSION     KCKM01001448.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1037)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1037)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1037
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22888apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1037
                     /note="ultra-conserved element locus uce-1415"
BASE COUNT          360 a          197 c          150 g          330 t
ORIGIN      
        1 tcagaatctc aaacatcaca acattaatgc actgtgatta caaagctccc gttatccccc
       61 ttacaggtgt caaatcattg taatgttata atttttgtta gtagctggta acaactaagt
      121 ctatttagat gataattgtt tcttagatgc atggtttagg gaggaaaaaa atcacgattt
      181 tacacattac caagtgaaaa agcagagata ctaaaaattg tcttactttt cctgatctga
      241 acaattttgt gacaaggcaa atgaacaatt ccatatagat gagcattcat gccactaagt
      301 gacggaaata aacagagctt tgaaatatca atgtttattt tttcactgga gcttttgctt
      361 tcagaataat tacctatgca caaactctag atggcaacat tgcacttact gtattagtaa
      421 aacaaaatgt cacactaagt ccctacatat ccactttatc aacattttat gtgccacaga
      481 tctatagcct cttattataa gtgtaatgaa gcagaagtta ttgaagcatt ttattgattg
      541 ctcagatcac aagtttactg tcatactgaa ttggcacctt acttgctgaa gcaaactgct
      601 gacacctttt taaaaaagtg acaactacat ctatttcatg accagaaatc cattttcatc
      661 tctatcaaga caagaatgca attttcactt catttaactg atgttaggcc tgctcaaggc
      721 atgacgctta gaaaaagaca caagtttaag gttcttaaaa tacttctggt aactagaatg
      781 cagcttagtt gtgggaaaaa tttcaaccat cactcaaatc tataaacaat acaacattct
      841 aagaatcact tatctgaact atcaagaggg cagttttctc tttcaatttc aaaattacca
      901 aaacactatt tttacattct tttaataaga agcaatgctg aaatattaca gctttcatac
      961 ggaatcttgc tctacacaaa gttcacttta acataggatt acctcttgag tggtccctac
     1021 ataggtcaaa cagacaa
//
LOCUS       KCKM01001449             925 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22902apa ultra-conserved element locus
            uce-285, sequence.
ACCESSION   KCKM01001449
VERSION     KCKM01001449.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 925)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 925)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..925
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22902apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>925
                     /note="ultra-conserved element locus uce-285"
BASE COUNT          295 a          156 c          177 g          297 t
ORIGIN      
        1 ataaatggat gttctgcctg aggaaggatt gcaacagtaa acaataaata atcaatttta
       61 taagcactat tgtatataca caaactgtgt gaagtatcaa tttggttcat aaaattcttt
      121 acctcttcca catttacttg atggggaaaa aaattactgt tcttgtggaa aggagaagtt
      181 tagtttactc tcagtgcaaa ttttgaaaag tggaaactct ggatgttatg tgcacaaggc
      241 agttgatttg aagagatcag aaaggtgttt aatttaaaag aaaaaaaagc aatttcaaca
      301 tactgattta tcctgcgtta cagttacctg tagagaacct ctagtcatgt ctatctgttt
      361 ttgatgcctc tacagaataa ctgtccagca tcctctgccc aaccaatcag aatgtaggaa
      421 aatctaccga tatgacggaa tctactgtga atctacctac cagaagtatg ttgaaatctg
      481 tgtgagtctt gcctctagct cgtgcattta gtgctcgtgc tctcccgctg ttcagaaatg
      541 acacgtgtgt tgaaaccgta cacttctact tgtgtgcaaa acctctacag cagggacaaa
      601 tatgttgttt aattctttga ggttgtgctc taaaagctaa aaagcaaata aacctaagac
      661 tttgctaaat ctcttaggta tgcttctgta cagtgcaata aacaagaatg tatacactag
      721 aaaatctcgg caaaatgtat tgcacaggtg cttcacatct tagggatttg aaaggtgtgt
      781 tatgtataaa ttagctgtca cttttttcag ttgtgtaatg gaatgatgag ttgtaatttg
      841 cataatcctt taagaagtca aattatactg tcatgtagca gacttaacat gctagctagg
      901 atttcatagc tttgcagcta attag
//
LOCUS       KCKM01001450             980 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22918apa ultra-conserved element locus
            uce-590, sequence.
ACCESSION   KCKM01001450
VERSION     KCKM01001450.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 980)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 980)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..980
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22918apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>980
                     /note="ultra-conserved element locus uce-590"
BASE COUNT          275 a          196 c          215 g          294 t
ORIGIN      
        1 accttattcg gacataaaag aactccttga agggtaaaac agggaattgt ctcaaagagg
       61 ataaagagtc taaactcctt tgtgctattt attcacggca ttaattgtga ggtccaacgg
      121 tgtcggttgg cagatgcacc gttatcggcc ccgcgatctg cgcagggagg agggagaagg
      181 cggagaaaaa aaaaataaaa aaagcacaag ggctcacatt caaaaatcgt tctttggcgt
      241 attgacactt tagttatcaa cagcccttat tatctgccga gcggcggatc gcagctcgcg
      301 ggtgacataa taagctacaa atcactggtg gggcctttct gcatcctcct taattgtgtg
      361 tattctccag aaaaaaaaat tatcgtcggg cctcttgtct tgatgagaaa ttgacatttt
      421 ctggcggagc ccggcgagga ctatgtgggg agataagact tatagttgtt ttaaaggagt
      481 gcagccattc tttcagaggc ctctttattg ctctagttga cccacttgat gagtatggat
      541 ttcatgaggt ctttttcagc atttgaacta taaaaggttc agaatgacac caccccttat
      601 agacaaaaga taaccttgcc ctttgaatat attgattctt tattaactag gctgtttaat
      661 gcaatgaaat gaggcattag attgaagcct atttcaagtg ctttgaataa tctttaaaag
      721 cttgaaagac tttaaaaagc tgccctgcaa taattggcat atacttttag agactcctct
      781 ccttcatctc gaacaaggaa tttttatcat cttcctaaga ctaaactcac cgtaggttga
      841 cgcaacacat ttttaccaag ctgcagctcg ggatgcgccg taggtggtgg gttgctctag
      901 gacttgtcat tcccagcaca aaccgtgtgg gttttcttct tttttgtatt ttctttgcgt
      961 tgaaacttag gtgaaccact
//
LOCUS       KCKM01001451             741 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22933apa ultra-conserved element locus
            uce-3871, sequence.
ACCESSION   KCKM01001451
VERSION     KCKM01001451.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 741)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 741)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..741
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22933apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>741
                     /note="ultra-conserved element locus uce-3871"
BASE COUNT          278 a          134 c          141 g          188 t
ORIGIN      
        1 gagggaagca taggtggatc ccgatctaag gtgtgtactt gcatatgtga accaatcatc
       61 ttcagcttta tttgaagaaa caaaatggct gctcctttgc taagagtatt catgtttgtt
      121 cagtacaatc ttacatgaaa tcactcaaaa atagaaatgc aaagaaaaat atcatcagcc
      181 aagttaaagc tatgcagcat ttaataataa ttttcagaga caggttttaa cggtaataaa
      241 aatggaaaca agggattggt accgtaaaac ctgtcaaata aatgtaaaaa ggacataaac
      301 cgccaaaata gctttcacat aaaatctcac cacaagataa aatacagctt tggggcaaaa
      361 agagagtcat atctccagca acttccataa ataattcact gctagcttgt aaacaataga
      421 gaagcacagt atgaatgcca aagagggtct ttatatgtca taaagccact ctaaagtgca
      481 cttgctgcag caagtctgac tgtgagcttt gatgtgctgg aaaagaaact gctatgctga
      541 ggtcatcagt tagtagaaaa caatttccct catacagaga agcagagtta ctgctgagct
      601 tctgacacag acagattgga tttaaaaaaa caagactgca taatgtgggc ttacaggggg
      661 aaagaaatct tctacacgcc ttctaaatga ccaaagctga aagaaaacat atcacctttt
      721 aatggctatc aacagttgac a
//
LOCUS       KCKM01001452             329 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22949apa ultra-conserved element locus
            uce-2454, sequence.
ACCESSION   KCKM01001452
VERSION     KCKM01001452.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 329)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 329)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22949apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>329
                     /note="ultra-conserved element locus uce-2454"
BASE COUNT          112 a           63 c           70 g           84 t
ORIGIN      
        1 aaaaaagagg ccagtttaga gaacaatgta ggcatgtgtt tttaaactac tgttcgtgca
       61 gtctggtcag gactgtgtga cacagtatac agtgttttgt catccaagga atgtctttga
      121 tcaagagttt atgcaagaag gaaaaaaaag ccatgaaacc ctaatccgtt cccacagtcc
      181 agtaaacgtg agctggacaa acagtggaca atagcagtaa agcttgctgc tggaacaata
      241 gctgcaacta aaaaaattaa agggttgctg actcacagtt cctactatca agaaagattc
      301 catgcagttt tgtttatacc ccagaatcc
//
LOCUS       KCKM01001453            1002 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22964apa ultra-conserved element locus
            uce-4227, sequence.
ACCESSION   KCKM01001453
VERSION     KCKM01001453.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1002)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1002)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1002
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22964apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1002
                     /note="ultra-conserved element locus uce-4227"
BASE COUNT          316 a          212 c          157 g          317 t
ORIGIN      
        1 ccacccactc cgaaaggatg cgtgaagacc agcctctggg ggggatacag gcaacccagt
       61 cctcagcctg actttgaggg agctaggctg atttacaccg gtattgtgcc tgcatcaaaa
      121 caaggctgct taatattcca ccacactcgc ttttgttgtt gtcaatcgcc tcagcaactc
      181 ctcttctttc aaaaacctga gcttctttga cttaatatga tcttgagctg ctttcatgga
      241 attcaaggtt ttcaagtcat ccactctgtt tcagcgtaat tatttccttt aaacatccac
      301 ttcaacggca taagcaattt tgaacttttt atgctgttta aattcaaaca taaatttgta
      361 cacaacaata aaacacgtcg ctaatttgtc atgctcctat gagcaactgt gtcactcaca
      421 ccaagaacca ctgattgtgg tgttcagggc tttcgttcct atttcacatc actcaattga
      481 gccttctgca gaaaagcttt taacaaccac atctggtctt taataaatca ctgcactttg
      541 tcttcctgcc aaaactcctc ctttatctaa cttacatctt catgatgaga taggaaatca
      601 cacattatgg tggtgacaaa caattgtaat tatgtcatta gtagccattt agtctacaaa
      661 ggttctcaaa aaggaaatat aatgcacaat aagaaatata ggataataca ttgatcacag
      721 ttctaatccg cattttactt cacaagtgta aaaagctggc ataattcatg ggcacagcag
      781 gcagtaatag tataccactt tatgaactat gcagctattt tattccccta tctacttaaa
      841 aataaaaaag cttttaatag cttgatttag acataaaagt tatttatgat gcttcactga
      901 ttataatatt taaacttttc gtgaaagtga ttctttctga aatgtaagta catattatgt
      961 catcaaagat cttggagaag aacatttaca ctagcaaaga aa
//
LOCUS       KCKM01001454             948 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22979apa ultra-conserved element locus
            uce-5707, sequence.
ACCESSION   KCKM01001454
VERSION     KCKM01001454.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 948)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 948)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..948
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22979apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>948
                     /note="ultra-conserved element locus uce-5707"
BASE COUNT          297 a          173 c          207 g          271 t
ORIGIN      
        1 ttatacagca tgcaagcatt gctgatgctc agcatcacgt cctaggattg aatataactt
       61 ccttcgcagt ctagaattta cccaccaaac agagagatcg gaaggcaaca ctaattacac
      121 atctgtccag cacgtagcga tacacagatg ttgggtgtca tataaatgca aaatgttgct
      181 attctacagg gtggtttcta tacatgtata gattaaacaa tggctttgtg cgggactaaa
      241 atctgcagtg ctgctgatga aacgagttaa ttgtatggct gtaatattat ggacggtgtg
      301 gttttactga ggacagtgat tcacgactgc acctatgctc tccatcatga aatataaatt
      361 aaaaatagtt gtattatggt aggctacctg tattgttaca ttcataatgg atatcgcaca
      421 tccgtccttg ctcagcgtag caggcaaagc ctgttagaga aactatggca gtatttttct
      481 tttaggtgta acaatctgtc agtatcaaat tctcttagtc agtagggagc atatagtgtt
      541 gatttactga aaatctggga ttatgtctgc tctgtggtga gtgtagattt aagaggggag
      601 aggtaagggg tccccaaaag gtgaagaaaa acacaaatga aacgtagcaa ggaatagctt
      661 gacagttaag atgcagtgca ggcaccatca agtcttcttg aaggaaaatt tgaaggaaaa
      721 cccttgcata caggcatgtt ctgagcactg tgtactgtac cttaaacagc ccactccatt
      781 acccacttca cactaaagaa ctgtaaatgt gtcgatgaag atgtggctct tcagccttac
      841 aagaaaaagc cttaatattt ccatggtcca gtgtacaaat gtttttggtg atacactgga
      901 attacaggtg cacatgtttg ggaacaaaac acaacaaaat tgaatttc
//
LOCUS       KCKM01001455             384 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 22994apa ultra-conserved element locus
            uce-3445, sequence.
ACCESSION   KCKM01001455
VERSION     KCKM01001455.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 384)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 384)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22994apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>384
                     /note="ultra-conserved element locus uce-3445"
BASE COUNT          114 a           57 c           65 g          148 t
ORIGIN      
        1 gtagataaat cttattgtat aagtagaaaa ttacttaatt tcatactaga aatggattga
       61 tgctgcaagt taaaatggac tgttcattga agttccaaat gtggtagcaa aaaatggtgt
      121 cttaagtgct tagtgtttga tgtcattaac agtttcgtaa tactctacat tgtagaaaga
      181 ttttgatact aaactgtgtc attgtacata gttctaatgc attgtattga ccaccagtac
      241 ttctataatg gtagattatt gtttgtgcat tcagactttt aagcattaaa cataagtaac
      301 ttctaagatg catttttcta tctttttctt ccccttccct cattcttttt gtgtgtgata
      361 atctcagtca tgtgtgcaga acgc
//
LOCUS       KCKM01001456             574 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23010apa ultra-conserved element locus
            uce-3493, sequence.
ACCESSION   KCKM01001456
VERSION     KCKM01001456.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 574)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 574)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..574
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23010apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>574
                     /note="ultra-conserved element locus uce-3493"
BASE COUNT          170 a           89 c           99 g          216 t
ORIGIN      
        1 gtaagtcaat ctctaaaaag ttactgcgga tttccctgtt tgttattttg ttaaaaatgg
       61 cttatggtct tctctagcgt tacagaagcc gacctgaaat gaaactagtc tagaaaaatt
      121 cattgttctc tgttgttgtg gctgtacctg aaataaaaat gttattgatg actgaatttt
      181 cttgtgtgta tatttggtga gctgtattaa aacagaaaaa agaaattact tgtattttct
      241 tcgctctatg ctttgaaaac atctatttga tttcaccccc atctgttgta atcaataacc
      301 tgaccatctt gttttttatt aaatgcactt actcttaatt tcatccacca gtggttttag
      361 agagaataat gtggagttac ctatataggt ttgacattat aaatcacttc ttgaggctga
      421 atcgtatagc ggtatcgatt gatcctgata tatcacagaa atttactgtc acttctgttt
      481 tcaattaaag atacaatcag tcagataatg acttaattgg attttacaga agattgagtt
      541 ttattgccca gtgctttacg agtttagtta agga
//
LOCUS       KCKM01001457             550 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23026apa ultra-conserved element locus
            uce-7471, sequence.
ACCESSION   KCKM01001457
VERSION     KCKM01001457.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 550)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 550)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23026apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>550
                     /note="ultra-conserved element locus uce-7471"
BASE COUNT          173 a           92 c           86 g          199 t
ORIGIN      
        1 tttttatttt tttttttact ctgagcttca atttccagcg acttatttag atgtaagcaa
       61 tgacagctgt aatcatgttt taaatcttgc tttgtatcct tagttataat gttgttcaat
      121 taatattcag aataatggaa gtgatgtgcc cctttgaaaa agacttgaat gcaggccaaa
      181 gctttgggaa actgattctc aagaggatta atcagcattt aaaacttgca ttaataaaaa
      241 tctgatcttc tactgtgtgg catgcataat acttttcatt tttaagcatt ttattttaat
      301 agtgtggtat cctttgtcct gatttttaaa gggattttaa aatctaactc cttcaaatca
      361 atcctgcttt gacccccgtg cattctttca cggaatataa aaacattcaa gaaatcctta
      421 gttcacaaat acccctatta ctaaggatga gcaaagtaca gtgcacaaga atatttgaaa
      481 tagaagagat atacagcttc caccggaatt tacgttaggt aagggctcac cttttcatat
      541 aagttattga
//
LOCUS       KCKM01001458             280 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23041apa ultra-conserved element locus
            uce-5223, sequence.
ACCESSION   KCKM01001458
VERSION     KCKM01001458.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 280)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 280)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..280
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23041apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>280
                     /note="ultra-conserved element locus uce-5223"
BASE COUNT          110 a           55 c           52 g           63 t
ORIGIN      
        1 aatacagcta tagatgtact cccacagcac acagagctcc tctgcctcgc cgagcagcac
       61 cagccaggct ctcaaagggt taatatgcag tttactattg aataacataa aatgagctgt
      121 aaataatgta atgatatgta ttgttaagct acatatactg taccaggtgc aagtactccc
      181 actcctcact tagatataat ctggggcagt caacaaacac agatgtattt taacaaaaag
      241 aaagagagag gaaaaaaaag atgaagaaag aataaacaag
//
LOCUS       KCKM01001459             752 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23057apa ultra-conserved element locus
            uce-44, sequence.
ACCESSION   KCKM01001459
VERSION     KCKM01001459.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 752)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 752)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..752
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23057apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>752
                     /note="ultra-conserved element locus uce-44"
BASE COUNT          221 a          186 c          127 g          218 t
ORIGIN      
        1 aatattattc taattttcat tcccggttaa ttttcatcgc gttctggcgt agtgtcacac
       61 tttaatgcga ttcactgtca aaaagtcacc cgtgtctcga aaactctcca caacgaacat
      121 gcccgtaatc caataatgaa aactgtaaca cgctgcctcg cgtttactac gccgccaaga
      181 ttcctccact tccaaatatt ttttagccaa taaagcagaa ataaattcag ctcgcgaggg
      241 caacaatcca gcacgatatg atttccatag ctaaaacact aaagacaaat ataatcatat
      301 tgatcgagtt ctataaagtg gtgaacttgc tctcaattgc ctgacacgat cccagagtga
      361 tggcaacaac tggtcagccc tatttgatta ctaataagag agatgtccct tctgtcagat
      421 acctcacatt ctccactaag caaacagcta tttcagctag ttaaacatta gcattgctct
      481 ccactggtgg tgcatatttc tttaggctta actcagggag ttttccaggt ttaatttttc
      541 agtcactgga cagcaaagtt catgatcaaa agataacttt gtgctgcgag ctactgaaac
      601 acaagccttc ttcaaaccag cctaaccctc ttcctggtgt cggatgaaca gtcctcgctt
      661 ccatttatta ctccgaggta cgatttcagc gtctacggtc aatccaaaaa ttgacttttg
      721 ctgctaccat attgcccaaa gagaagggct tc
//
LOCUS       KCKM01001460             708 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23088apa ultra-conserved element locus
            uce-898, sequence.
ACCESSION   KCKM01001460
VERSION     KCKM01001460.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 708)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 708)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..708
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23088apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>708
                     /note="ultra-conserved element locus uce-898"
BASE COUNT          209 a          140 c          142 g          217 t
ORIGIN      
        1 ttttcttttt ttttaaggat gattattgat ctcttgctga gctgagattt cagttttatg
       61 ccagatagtt tgattaatgg gttgctttct gtaagtggac tgaatgggga taggaagcac
      121 aagccgctct tgccgccaac cctaactccg tcaagacgca tagctcatta tgaaacagtt
      181 atcaagtata catgaaaaat taattgggct cagtttgatt ctgaaaagga tcagctttct
      241 acttggcggt ccccccaatc tttccagatg ttgcacgcta gccccttgag aagcagcgaa
      301 gggagatgta ttaatacatt gtattgatta gatcaagacc cctgacagtt atttgtagag
      361 ataccatctg gctgctgttc gaattccttc accaaaaaca ggacgtgaca tgttattaat
      421 ctcaactctc taagtataga cagttgcctt ttctgctaaa ccgcatttta ccattccgta
      481 ggagatggag gcagacctga agggtgctga aattaaggtt attacacaaa ttgagccata
      541 tggtccaaat atttcagcaa gaaaattgcc aggcaataaa aattgctcct gccttcctaa
      601 tggtggaaat tacagtttaa ccatggctct aatgatgtcc ttctgccgcg cttaactact
      661 gttacatgaa ggacattgtt ttaaaaatat aaaaaacaag taaatgcc
//
LOCUS       KCKM01001461             448 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23102apa ultra-conserved element locus
            uce-5771, sequence.
ACCESSION   KCKM01001461
VERSION     KCKM01001461.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 448)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 448)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23102apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>448
                     /note="ultra-conserved element locus uce-5771"
BASE COUNT          135 a           75 c           84 g          154 t
ORIGIN      
        1 tttatgtgta aaactctgtg tatgttaaga agatagctgt ggtgcaattg ctttgtcttt
       61 ccagaatcta ctctgagaag gagaaaagcc aggccccaag catctctcac tgccactcac
      121 agtagtactt tagcagaaga gatagtggca ctgctgagga cgctccattc gctcagccag
      181 tggaatggac tcataaacaa gtacatcaac tctcagctaa cctccatcac ccacatcttt
      241 gcaggaaaac agtcagaagg ggtagtttcc acgttttaaa attttttata gcaatgtttg
      301 ttttgaaatt ataaatatta aatgtttgta aatgatataa agcttaattt tgaaaccatt
      361 tttctatttt tttaatgtct atgtatttat gtgttgtagt tttaaaattg aagtttgtgt
      421 gatgaacttt gttttttaaa gcagacag
//
LOCUS       KCKM01001462             845 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23118apa ultra-conserved element locus
            uce-6995, sequence.
ACCESSION   KCKM01001462
VERSION     KCKM01001462.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 845)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 845)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..845
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23118apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>845
                     /note="ultra-conserved element locus uce-6995"
BASE COUNT          255 a          191 c          178 g          221 t
ORIGIN      
        1 aaaaaacctg cattcacacg gtgctttcta aaacatggca ctgccagatg ccataagtaa
       61 cgaagccaaa atgatcagat attgctctgt ccaacaaagc caactgcgcg gcgctggtga
      121 ggtccgagga ggaaacgcat tatctgctgc cgtacatttc tgagtcagac ctatgcgggt
      181 ctttgaacct ttactaaacc gattttgtgt ttgaaatctt ttctgaactt atcttctctg
      241 ttttagcaag ctagacacaa cacactccct gactcctgtc cgggaaccac gggagggacc
      301 gagcatgcag tggctaagca ctctcattga aaaagccaga ggatgctgca ataattgtcc
      361 tgagaggcta gaaaggaaac aagactctat actgacagct tagctcagca tgaactctca
      421 tttttcacat ggagctaatt aaaaactgaa attagttaaa tatggaaatg acacttgcaa
      481 gcactttagc tgaattctgg caaaatccct ctagagtgct gcgacgctac ctgctgcttc
      541 aaaactcccc aattgaattt cacagttaaa aggctgagca aagggaaagt tattacagag
      601 atttccaatt caaaatgtgt ctgtaaaatt ctaaattaaa tttcatggta gccctttcag
      661 taactaggaa catactgtgc agcccaaaga tgcggcgctc aaacgatgtg cctgcacgta
      721 tttgctgatt atctcacctt ttggcactgg gctggttgtg ccagaaccgt gaagctcaca
      781 aggatatcgg cactgcaatc ctacaaagat aagccatgta ctgctactga agtggttatt
      841 tggaa
//
LOCUS       KCKM01001463             844 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23134apa ultra-conserved element locus
            uce-8036, sequence.
ACCESSION   KCKM01001463
VERSION     KCKM01001463.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 844)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 844)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..844
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23134apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>844
                     /note="ultra-conserved element locus uce-8036"
BASE COUNT          241 a          185 c          202 g          216 t
ORIGIN      
        1 tataggtata ttgatttaaa aaacatgcct gtgaacctcc ctgtgaactt atctgccacc
       61 acaaaccaag tacacccacg cccttgatcc ctttttatct cagtctgtgt tgctcacatt
      121 gccatggtac cgcaggacct tcaactcact atcatagcat cccagccgag cctttgaagc
      181 agtttgcatc accagctgag gaccatgaag aaccaaagaa gcctttccag gtggaacagg
      241 gacagtgatg cgtttcccac tgactaagag cctcgagccc acgggaacca gctgagttcc
      301 caccacctta gaacctaccc gagctacaag tgctgaagga aaccgacata cctgtatatt
      361 ttatatctgg ttgtaaatcc ttgacgatgt ctttccacaa aggataagta gctccgtgag
      421 tggtggaaag gccccctgtc tgaaataagc caatcaaatt ccttggagac atgttggttg
      481 gtagcagctg ggtcctggtg ggagggctgt actagtatat ggtcccatat aaacaggagg
      541 tagaggaact caacaagcct ccagttcatg cttttctgtc tgcctttttc ctctcattct
      601 tgctccattc tgtggagtcc tgttgaaaaa gagagggaag aggaggaagg aaagagagag
      661 agaaaaatgg aggggaggag agggaggagg gagagaaaga gtttaaaaat gggaattgct
      721 ttgatccttt gacaactgtt tctcagggtg aaaatagaca tgaaaaatca agttttaaaa
      781 gacttcagtc cacctgtgtt acagcttaga gtatttggca gtgttttatt cacgtaccta
      841 agtg
//
LOCUS       KCKM01001464             522 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23149apa ultra-conserved element locus
            uce-7047, sequence.
ACCESSION   KCKM01001464
VERSION     KCKM01001464.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 522)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 522)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23149apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>522
                     /note="ultra-conserved element locus uce-7047"
BASE COUNT          139 a          101 c          117 g          165 t
ORIGIN      
        1 gtgggaatgg aaatcctctg agtgcagcgc ctaggctagg attgcagagg aagctgaggc
       61 ctccagccct gcacaggaag caatcttaga gcaggcctta aatgccagat tccaggcaga
      121 gtttaactaa ccactgacag ctctgtaaac aaagcaggga caaaaagaga acagctttcc
      181 cttttctggt agtcattttt tgtttggggg ctgcagggga attctgtaat actcagcttg
      241 atgggatata aaccaaggct ggaaaggctt tgtatatgaa gaaccgtaaa ggggaaaata
      301 tttcatggac taaatcataa agaagaaggt agggcgcggg gaaaatgcgt gaaccaaaaa
      361 aaatattgct acttttggtt cttttgagct ggatttatac atagtttggc acctcctgaa
      421 tggtatttaa aagctgtggc ttattttcct tccctgctct tctcttttct ttttatcttc
      481 atttcctttt ctcttctttt tctttctttt ctcattttct ct
//
LOCUS       KCKM01001465            1011 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23164apa ultra-conserved element locus
            uce-7465, sequence.
ACCESSION   KCKM01001465
VERSION     KCKM01001465.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1011)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1011)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1011
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23164apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1011
                     /note="ultra-conserved element locus uce-7465"
BASE COUNT          311 a          167 c          196 g          337 t
ORIGIN      
        1 aattgatgat atggttattc aattaaatta gaatattatg caaaatctga aacttattaa
       61 gaatttatgt agatgacagt gattcacttt ttgtctccct cacctcagag ccagcaaatt
      121 ttcatgtaca agtttcttaa actgaaatga cagaagcttt ttttttaaga gttcaattgg
      181 ctaggagcaa ctcaacatgg ctctaatttt ttgcaaaatg aagcatgtaa ggtatccaac
      241 aatcaaattc acttttaagt acttatgtat aaattactca agaatggtgg aaagaagagt
      301 tattcactgt cgtttttaga acccattcca gcagcttgtc tctggagtta aatagagctg
      361 tcttgatcgt ttttacatat agacttcctt gaacactaag aagaattata atcacctgat
      421 tataaattca ctgttaatat agccttagag ttgagaacat ttcactccag tagttaattt
      481 agtctgtggt aaattctcac tgttatttaa tgtcatttat cacctgctgt tttgtcttac
      541 tgtgaacatc ctgcctgccc tgtactgtct acagtacatg gaccttctgt gactttaatg
      601 tactcagaac aaaggctcca aagtgcttct atcgggagga tttggcaagt tgccgtagat
      661 atattcaagc cattttgctg cctgtcactc agtgctttac aaattgaact ctgaggagag
      721 gtaaaaaggg tctatgaggc tttttttttt ctgggaagaa tatgctaata aagcgccatc
      781 agcaggaagc aggttgtgtc tgaaagagtt ttgtcaactc tgaattaatt ttgtgtgtta
      841 agaaacacgg gggtgcttct agagccggtc tgtggtaatt aatccttcct gtttctggaa
      901 gagcagaact gtaataaatg cagcccagat ttaacagatg tgtgcacaca atgtatgctt
      961 tatgaggagt aaaacaaaat gaagggtgta gaacaaaaaa tgttgattta a
//
LOCUS       KCKM01001466            1054 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23179apa ultra-conserved element locus
            uce-2642, sequence.
ACCESSION   KCKM01001466
VERSION     KCKM01001466.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1054)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1054)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1054
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23179apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1054
                     /note="ultra-conserved element locus uce-2642"
BASE COUNT          334 a          213 c          200 g          307 t
ORIGIN      
        1 gcatataact gcttttcaat atattcgaag atatgggaga ttaaaagaaa gtataaatat
       61 aaattacata cctcatttaa acataaccaa actaatttaa actcaggatt tcttctaatt
      121 cctacccaac ataggcttta tgacattgaa atttctttgg cacgtaggag gttccttatc
      181 aaagttaaaa tataaaccca ttgccacagc accaggaagc tggttttatg tctggtataa
      241 aacaaaaacc atgttatttt cccctcaagc atgctagaaa aagcagggct gtctaaaacc
      301 ttcatgtcac acgcagtcat agggatacag cgatgctaat gtgaaatacg ttactgggag
      361 cacgacatac cattcagcta taattgactc aaagtaaaca tcaggcattt gggggaaaaa
      421 aaacgaggag ccatagctgc cattgccaac cggaaaagaa agccgtaaca gcctacctga
      481 gacaagcgag actgtgtctt tctcccatga gacaacagtg atgtatgcct ccacagagga
      541 ggggataatg cacttgaaca ctgctacatt gcctctcatg gctttctggt cctccacacg
      601 gactgtatag ggttcccgta aaactgagga cagaagaaga ggttttgtta aagaggcact
      661 tctcatctac ttcctccact agccctgtga agttccccca agaaggttgt tcaggttgtg
      721 aattcttttg tcttgataaa tgatacagct ttgcaaagtt gattgtagtt taacatgaaa
      781 gtgctcccag atcttttaat tatctcaaaa tctgtattcc actgtatttg tcttcttctc
      841 ctacctaatt ctgaaggcaa agagaaatat ttccataaaa tctgcatatt tatatgggta
      901 aatggtgtta tgtcttctgt tacttgtcta gtttctcatg ccatatttcc caccacaaac
      961 agttttctgc tctgtcaaag ggtacaaagc atatacaagt aatgtgtgtg aattagacat
     1021 ccagagggta gaagagaagg tcaatgtcat ttgg
//
LOCUS       KCKM01001467            1081 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23194apa ultra-conserved element locus
            uce-5659, sequence.
ACCESSION   KCKM01001467
VERSION     KCKM01001467.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1081)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1081)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1081
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23194apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1081
                     /note="ultra-conserved element locus uce-5659"
BASE COUNT          332 a          208 c          208 g          333 t
ORIGIN      
        1 aatttgcctc tttcacgggc ccacgttttg tttctaattt cagtgccaca gtttgtatta
       61 ctgacgaatg cacaatgttg caatggaagt gattcctctc tgtcagaatc aatcatcata
      121 tcagttttaa tcagataaag cttttggctt ctactatcta aattgccctt cccacagtgc
      181 ctaagacaag catcagtact ccatcacaaa ataaatgtgt tgctatttga tagctcattt
      241 gaacacgaca gtatttacat cttagttggt tagattttca tttaacagaa gtttggggtt
      301 cacattgaaa ataaaaacaa tacgtctctg ttcctctcgc cattcatgtc tacttttgtt
      361 tcagcctaaa ataacacatt gctggagggt attttcttaa cactgccaag cctgaatgca
      421 agccctgtgg aaaatgtttg tgttgggctt gccatggtcc aggctaataa caacgtgatg
      481 atgtataggt gaattcctgc tcctcaagtc ctctgtgaca tacggattag gcctgccctt
      541 atcttctaag acatctggat gagtgtctgg gttttaattt cacaatgaaa ccactgggga
      601 ctagagttat gttatgtgct tatgaacaaa gtggaatatc cctggtaagg gcaagagtgg
      661 attaccttag ataactctac ttaaaccagg gaacatttga gaatgttgag gaaaggaaag
      721 aggttccacc aataaaaaca aacacaggct taagtttgtg ttctgtgtac taaacatttt
      781 aaagctcctg gaggttgaaa tatggccaca tgtaaatgga ctgataaagc taaggcaact
      841 cttgaaagac cagatcaggc ttcccaggac aactaccagc actaaatcct aatggcatgc
      901 ataaatcatt tggagacaga tttattcaga agatgccact ttaaagtcga aatactctgc
      961 tttaatcact agaaatagta tgtgtatgct aacatttgag gaaaatgctc tagggcaaca
     1021 tgaaattagt atctaaaatt cctgaataca ggctttccct aaaatgaaga tttttatctg
     1081 t
//
LOCUS       KCKM01001468             966 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23210apa ultra-conserved element locus
            uce-7981, sequence.
ACCESSION   KCKM01001468
VERSION     KCKM01001468.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 966)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 966)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..966
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23210apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>966
                     /note="ultra-conserved element locus uce-7981"
BASE COUNT          281 a          178 c          181 g          326 t
ORIGIN      
        1 actggggcac ctaaaggata taaactcttt tgggctgggg ctgcatctga acagggaatt
       61 taactgaaag aaaattccag aggatctatt ggacattaga cacgcttctt caacaaagta
      121 tgagacagaa actatgttta ctgagattgc atcatgctgg ttgtttcagg gaaaaaaaat
      181 ataattttaa acatgaaaat acattgaaac caagcaaaca attcagtgat gcttcttctg
      241 aggtggacac attcttggta ggcagcccta attgttgcaa tagcttttag gtgttctaat
      301 gcactcgagt gaattatgca ccacactgct tctgaatgac acagccattt ctgactccat
      361 taatatggaa gaattcagcc aaatgctttt aaacgatagc ttcactttat ttgtaatttc
      421 agactctatt gatttccttc tgttcccttc attatgattt caattgatta ccttggcaac
      481 tgcaataaca atgattgcac ttgacactgt ctgagactct cgagatggta tttgaatagg
      541 aatggtataa tttggggaaa aatgcctaca agaacctgcc attaacagta cacttacact
      601 ttacttttat tgacttcctt ttctttcaaa caggcccttg tcaaggaatc tgttgctagt
      661 aaccagttag gatttcagtg actccttgaa gtaaaggatt attattaaga acaagggcag
      721 attttatagt actggggttt tttcagccct gtgatagttc agggaagctg cccacccttt
      781 tttttcccct tggtatcagg gctaccaagt cttttaaaac agtgttccta gtcttttaaa
      841 acagggttgc tagtcaaggt tttcttttac taattgtatt atgtcctttc ctacaggaga
      901 atttcaagta ctttgattaa aatttgagat gaccttcttt agtttcactg cagtttatat
      961 gttgca
//
LOCUS       KCKM01001469             780 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23225apa ultra-conserved element locus
            uce-654, sequence.
ACCESSION   KCKM01001469
VERSION     KCKM01001469.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 780)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 780)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..780
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23225apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>780
                     /note="ultra-conserved element locus uce-654"
BASE COUNT          240 a          164 c          137 g          239 t
ORIGIN      
        1 tttttacaaa ctgcatgaat atgaaactga tgggatattc agcgtttact ggggaaagcg
       61 tggccgtact tggcgtgttt gccgagtgca agcctgttcc cgcgggggaa gatggcagca
      121 ggctaataaa agagcactta aactttgatc tccacacatt ttttcagccc catttcagaa
      181 tgttctcttt cactgctgct ttcgatacct aatctttcca aaagcttctt taaagataaa
      241 aagagggaaa aaaaccagca ctgcaccggt cagaaatgaa agagatccca ttctggatgg
      301 tatcaaattc ctgaacaaac tttccgtgaa gtaatcttta cctacaggaa gtcaattaaa
      361 atgtgacagg agagattaag ggctctgtga cagatttcac tggtctgtgc tcagtataga
      421 cacagcaatg ctataacatt gaagttacaa tgaatattta acaatccaat gactaactac
      481 tctacaagag ttttcaaaat aatgtgatgt ccctatttgt tagagcaagt tcactctggc
      541 atcaattaaa tcatgaactg tcatcttgat tgctctcttt gttgagggac agcacatttc
      601 catctaagga tcagctcagc tttatatctc tgcaagacaa ttcataattc tgagcagcag
      661 aatgaatgca caaattacat tcttcaacct tttactccca ctaaatcttt ccttttttcc
      721 actttgctga gcctgaatat tttattcctc catcaaatat gcatcccatt aattaagtta
//
LOCUS       KCKM01001470             923 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23241apa ultra-conserved element locus
            uce-1888, sequence.
ACCESSION   KCKM01001470
VERSION     KCKM01001470.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 923)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 923)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..923
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23241apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>923
                     /note="ultra-conserved element locus uce-1888"
BASE COUNT          314 a          174 c          152 g          283 t
ORIGIN      
        1 tgtcttgcct tactgtatcc tcagcctatc atgatcacag cctgagaact actctttgat
       61 ttgcataatc acgtattaat tgtaccacta gtttacagtt actttacaaa ctggaaatga
      121 ttcattcaaa ctgtttgatt aggacttgca aaataggctg caatcagaga attttgggat
      181 gtgcttgtaa atgtgttggc agccagaaaa gcagggctac aatcaccgta accaagtagg
      241 ttactcaaag ctagctattt ctgaacaaaa aaccctttac aactacagtt catgctacat
      301 ttccctttta agggatagtt ttagatgcaa attcatttac agaggtagat gagatgaaat
      361 gtgcaacaga cacacctgac taacttgcat tttgtatctc taacactcaa aagtacaatg
      421 cttatggtaa tgaattttat ctattacaag ggaaaacaat cacctttgat gacattatag
      481 aataaacaca tttaacagcc tgctgaattg ctgaagtatc attttcaacg acctcattag
      541 tgtcacttaa ttaaaacttc ctgctcttga ctttgatgct ggtgcaggca aaaacacaga
      601 gggaattgaa caaacaacaa aaacgggagg ggtatcttct agtgataaat agcagtagtt
      661 gctaatgaaa ccaaattatg tacctttttc ctgcaactcc gataaaataa tatgaaacac
      721 acagcaactt tgcatcaaac aaattaatca gccgtcagca gattcgcctg ataataatct
      781 cctgccctta ttgataattt aagaaaaaaa gttgtttttt tctgtacaca atcattaggt
      841 tggtgataat taaagcttca gcttcagaaa tgccataata accgttaatt agcaggatgc
      901 tattttcaac ataatttgct aat
//
LOCUS       KCKM01001471            1115 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23257apa ultra-conserved element locus
            uce-2620, sequence.
ACCESSION   KCKM01001471
VERSION     KCKM01001471.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1115)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1115)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1115
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23257apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1115
                     /note="ultra-conserved element locus uce-2620"
BASE COUNT          367 a          253 c          203 g          292 t
ORIGIN      
        1 agccccttca ggaacatcag ctgtatcatc cctccacaaa acatgcattt taaaaaaaaa
       61 tcagctctga gcttagaaaa tcttcaacaa atacatttgc aattcagtta tcaatatctg
      121 gtaacaaaat acacgatgag agcacgtcag aaaaacactg aatatggtca gatgttaacc
      181 atttatcctc attaattacc catttgtcag tgtcttctgg gctattttta gaaccttgat
      241 ttaatacagg ggaagagagt gtgagagaga acttggtgcg cgataaaaga ggtttcatac
      301 tcaattcagc atctaaccct aataaatatg ccatattagt gccacaataa gaaaaatagc
      361 atgcaaccct ttcaaaaagc agcagactag ctttccgtgg ctattgctct ttgcctttca
      421 cacccgcctc atccaccaac tggctctatc ttgaaggaga gaccttaaat tcctgcaagc
      481 agcctgcaag gcacatgcag tagcagcagt gtactgacat ttgctaagca ccagcgtccc
      541 tcaagtgact gggagcgaag ccattgacgt cactgaacaa taggcaaaat atttcctcct
      601 cctccatagt cctgaactgt aaacacccag cttgcacaca gcaggcggaa catttgggga
      661 gaggcggaga aggagaatgt gaaaaaactc tcaagtgatg ctgctgaaaa caagcagctg
      721 ttcctgcata accaatctct ccctattcct tccattttgc tctgaaaatt gctggtgtcc
      781 ccttagtgta ggtcacatgg tatagaagat aaagctaaga caaactataa gtaaaactgt
      841 gtctactgaa ctcacaagga atttttggaa gtgaaaatgc ctaatattca ttaaaagaaa
      901 aaagcatcct ctctctttct ccctcattct gtctccttta tgggtagcta cagtactgta
      961 acagtcatcc atgtattttg aacaaggcgt ggtggatgga atgtaagaga atttccatct
     1021 tggtcatccc cctccacaca cctacgttat tgcaagccaa agagaaaaaa aagcaaattt
     1081 cagaattata attacaaaaa tcacacagat cagta
//
LOCUS       KCKM01001472            1143 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23273apa ultra-conserved element locus
            uce-6100, sequence.
ACCESSION   KCKM01001472
VERSION     KCKM01001472.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1143)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1143)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1143
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23273apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1143
                     /note="ultra-conserved element locus uce-6100"
BASE COUNT          249 a          366 c          222 g          306 t
ORIGIN      
        1 ccggagtacg ctgtagtgac ttctgcgcca ccgacttcca ctccccctac accgcctcta
       61 aggcactctg catcacgttt tgctacatct ttaggctcag ctttccaccc cgttctcccc
      121 cattatgcta cggttcctcg accgctgaac aaaagttctc agcccccttc tcctgtcaat
      181 gccccagcga ctttgcctcc aaatacaaag cctgttgcct ggtccgcgcc cagttttgcc
      241 ccccttcccc cttctcctcc ggtaatgata agcagtccac cgggcaaagc tactggtcca
      301 agacccgtcc tcccagtgtc ggcttctaat ccagtcaccc aaacgtccac gtctcctacg
      361 gctcctaatg gccttcctga aaacctggct tatccggttc cttcaccttc tacctcaggt
      421 ccaactccgc ctccgccacc tcctcccccc ccactgcctt cctttccgcc tctgtcactc
      481 tctggacctc aagcttctcc ttctcccaac tccccgaatg cctcgactcc ctcatccaag
      541 cctagtgttc tcccttctcc ctctgcagct acccctgcct ctgttgagaa ctctctaaac
      601 tctgtgctgg gagactcctc tgcttctgag ccagtcttgc aggcagcctc tcagccgatt
      661 gaacctacga cccagcaggg taaggctttc tgttattgct actaatgcac taatcaggaa
      721 tgcagtcgaa accaattggt accaaagccc gtaactgccc caaagagtta atacgacgct
      781 tccaaagtgg cagtgatctt aataccgcaa cgaaataccg tttggaaaac tggggtaagg
      841 gaaagctctg tggataagag ccggacttct gtgacctgtc attagtaaaa ttccgatttc
      901 ttaagctctc gcctgttgag aacagagctt gtgcttgctt ggtaaatctt gcaccgttgt
      961 ttgtgtggaa cgtgatgtta ataggcggca tcgttagttt cctaatggca gccaacatgg
     1021 aagagtactt gtgcagcttt agacatgtga atgatgacct taagtgagga acagtgcaaa
     1081 ccactttaag gctctttatg tagtctcaat ttttagaaag taatatgcaa gacctacagc
     1141 att
//
LOCUS       KCKM01001473             464 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23288apa ultra-conserved element locus
            uce-4090, sequence.
ACCESSION   KCKM01001473
VERSION     KCKM01001473.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 464)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 464)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23288apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>464
                     /note="ultra-conserved element locus uce-4090"
BASE COUNT          144 a           78 c           92 g          150 t
ORIGIN      
        1 gtactgttca ctgaaagcgt ggtgatagct cgaccactat gccgaggagc cagaaggagt
       61 tactttcctc ggtaaggatc actgaatgtg tcactggtta attcctgttc tatgctcctc
      121 attagcatta ctctcaagtt tctggttatc atatccgaaa tattaagaca taataagtac
      181 gaaggtgcag ataattggat attaaccaga acatacttga ctgggcagga ggtagggcct
      241 tgcttaaact aatcctgaaa tgtattaatc atcaattaat gaatgggttt caaattcatt
      301 ttctattaca gaacacctct gagtatctaa gctttttcta ataaaatgag ttggaataac
      361 aggataggaa taagtaacac tgcaatttga ggctggtttg aattaattcc ctatagcttg
      421 ttattaagtt ctttgaaaac aataatcctg gtatgagtga cttt
//
LOCUS       KCKM01001474             705 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23303apa ultra-conserved element locus
            uce-4208, sequence.
ACCESSION   KCKM01001474
VERSION     KCKM01001474.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 705)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 705)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23303apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>705
                     /note="ultra-conserved element locus uce-4208"
BASE COUNT          223 a          126 c          174 g          182 t
ORIGIN      
        1 ttaacaattg tactctgctg aacaaatcca gcttaatacc acaaaaacag attgagctaa
       61 gtttatgaaa tttacagatt acctaaaatg ctaggagtta attacagtct gctttccctg
      121 gcatgtcagc ttgattaaat ttggagttcc aagatgaatt ggcccaaatt cattagtgtt
      181 ccccgggtgc atatgttggt caaggtcaag cgaagcacat tgactgtagt gttggggggg
      241 ggggggaagg gtttctaagg agggtggact cttaaaaggt ctggggttgc agcaagaaac
      301 tttgatactt tttaacttaa taaatcttga cagcctaatc atggctaagc ctttgcagtg
      361 ttattggtac agatggcaaa gctagacata tttaaagaga tctcagcagc tagtggcagg
      421 agagcattga atccaaatgc actgttgggc tctcagagaa agtgcaagaa gggaggataa
      481 aaagctacac agcatttcca tctcttgaca tctccagcag cctcagatac aaaatatgat
      541 aaggctcctg ctgagctaat aagcccaaca aatgtctgtg tccatgaagt agatgaagtg
      601 ggatcaagta gttgggggct gctgtatgaa aataaaccag cacccagggt ataatggcac
      661 tgtagaaagc tgcaaggtca ggctgatgac agaaacactg gataa
//
LOCUS       KCKM01001475             848 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23319apa ultra-conserved element locus
            uce-6682, sequence.
ACCESSION   KCKM01001475
VERSION     KCKM01001475.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 848)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 848)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..848
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23319apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>848
                     /note="ultra-conserved element locus uce-6682"
BASE COUNT          287 a          153 c          168 g          240 t
ORIGIN      
        1 aaaaacactc acagtcacag gaaatctgtt ttgactgatt ttcttttaaa acctggatta
       61 ctcaaacaca atcctataat ttaatgacaa ccaagattaa catccaccag actctgaaaa
      121 cggatgcaat agttctcaaa gggttacacc accaatgtaa taccagcgtc aagtttctct
      181 ttagcatgac tgttgcttta gttcattgaa atccacttca gagcttttta gcatgctttg
      241 gaatgagtgc tcctgacaga cctataaaag gcctgaggca gttggcttgg tacagcttgg
      301 gaaagattat gcaggaaaac caaccaaaaa tcaaacaaag caataaaaag gttctgctcg
      361 aatatagtaa tgaatataaa tgagtttaaa acattgagga cgtagcccag agcagctgta
      421 aaaaacacaa catgaatgta ttattaaggc tgttactata ttgcagatat tttggcccct
      481 tgtttgttgg aaaatggctg tccgaacagt ctgaagtcct gcgtgtcatc cgagcctccc
      541 acctgacaaa agaagtagga gtataggact ttatccatag cagacagaaa gcaatcctct
      601 ttggagacaa agctgttttg ggtcttctca ctttcctgaa agtttcgttg tgggttgttg
      661 tgttttttct aaaaaaattt actttcagaa taaaattttt caaaggggaa caggccttaa
      721 gagaaaaatg tagaaacatt ggagattttt ttcctcttca ttaattaatc ctgatagttt
      781 atagggcatt gagcgtgcag aggaaaggcc tagaatcgaa tgacaaagaa agacaaagga
      841 ctgaagaa
//
LOCUS       KCKM01001476             881 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23335apa ultra-conserved element locus
            uce-1259, sequence.
ACCESSION   KCKM01001476
VERSION     KCKM01001476.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 881)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 881)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..881
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23335apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>881
                     /note="ultra-conserved element locus uce-1259"
BASE COUNT          283 a          173 c          164 g          261 t
ORIGIN      
        1 gttgtacagt ttcttctaag catatatgac aaattattcc cttggcacaa taaacaggac
       61 tcaagccctt taattataat atagcactca atatcttcag acatttcaac gtttcctatg
      121 tatcctacac atttcattac aaggaaaggt tgaacagaat taaaaggatg acgttacccg
      181 aagattgata gtttacctgt ccaaaaggaa aaagttgtag tacgagtgag cacaaaggaa
      241 agaaggatcc aaaccaagtt ttgattgcag aggagactga gataagagag tttttattat
      301 ccacagcttt tagccttatt taccatcagg ctatcttgcc acaagcatgc tttttagttc
      361 tgacagctct gaattatgac cattgtggga tcctatctca ttaactgaaa tgggagaata
      421 aaacatcaaa caatcataaa aataatttgg cactgtgaaa ccacttagga gcagctgtca
      481 aacaggttgg aagataaagt tctaaataaa aagaatagag agagctgcaa tgtcctgcca
      541 tatgcttcct ctgcattata gactccttaa taatatgaag tgcctgtgtt tatgcagaat
      601 aggccagaca ctccatatat gatattgatt atgccttaac cccaatttag taaagacgta
      661 ctcctccttt tcctaatcag atattgcaga aacagttttc tgaaaatgtc cctaatgcca
      721 agacatattt tatctctgaa ggctgtggca ggagataggg ctttgtcttg cctgttgtca
      781 tggcttggag cccagtttta ggacagcaag gcccctgtgg ggctcttctc cagcagtttt
      841 catccagcaa ttcaaaaaca tacatcttta tcaagctgtt g
//
LOCUS       KCKM01001477             562 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23350apa ultra-conserved element locus
            uce-3731, sequence.
ACCESSION   KCKM01001477
VERSION     KCKM01001477.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 562)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 562)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23350apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>562
                     /note="ultra-conserved element locus uce-3731"
BASE COUNT          176 a           96 c          103 g          187 t
ORIGIN      
        1 agtgttttgt gcctttgatt aaaataacat tttaaatgct ttgaacaaac atatctcccc
       61 atacttctaa gggattattt tacatatttc ttggtggaat aaagcaattc attcttcctg
      121 tcgcagtaca gaaaggctaa gaatatcttt cgtcacatat aaagtaaaaa tactgtaggc
      181 tgttgcatta ttaccaaaaa aataaaaaaa taaagggagg gggtggtggg gtgggagaaa
      241 gctgccttag agattaagtt tcccttttat gaaatcgtat ttagtctctt tttttaacaa
      301 atctaacaac aatgctctac agccgctcac tgggaaatac ctttaatgtt aaatgcagat
      361 tctgattttc ttggctaatg cagaaagcct ttctattgaa atataaataa ggggtttggt
      421 atatcccact aaagcctttc cagtgaatga cttctgtggg tttttcatgg ctaccctcca
      481 tggctgtaat gtgaggcttt tatcctacta ttgaaaacta tccgctgcta ttaaaaaaaa
      541 tgtggaagga cactgcacct tt
//
LOCUS       KCKM01001478             595 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23366apa ultra-conserved element locus
            uce-4482, sequence.
ACCESSION   KCKM01001478
VERSION     KCKM01001478.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 595)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 595)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23366apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>595
                     /note="ultra-conserved element locus uce-4482"
BASE COUNT          194 a          117 c          111 g          173 t
ORIGIN      
        1 gaagcgcctt cagtttccgg cccaaaagtt tattcaagtt aagaaaacac atcctgagat
       61 taaaaagagt attgcaccac tgtcaatttt cagacgttgc catcaggaaa aaaaaattac
      121 atttcaggct gacgagcgac taatcaaggc aagtgaaacg gtgctgcaat aaattactcc
      181 gcagcgaaat aaaccacaca aacagaccga tgataataaa tgtaaattat ttctctgaag
      241 aaattttctt ggtatatgag taatacgaac catcaggaag gagtcttcct taacattaat
      301 tacagaaaat gacaagtgag ctgatgactg cgaaggctca ttatctgaga acatattcac
      361 aactttgcaa tttgcgcgag atgtactcgg gctaaattaa tctcccttct ttgcatgagc
      421 ctcttctaat tttcatgtta ttaacaggtt tgcagtatca ctcagtgctt gtcactctaa
      481 tcaggtttcg gcatgttcgc aaaagcgaag tgtcatttat aaggataagc cctcataatg
      541 gcgctctctt tcatgtggag aattctacaa ggttgctttt aataaggtcc tttaa
//
LOCUS       KCKM01001479             378 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23382apa ultra-conserved element locus
            uce-5625, sequence.
ACCESSION   KCKM01001479
VERSION     KCKM01001479.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 378)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 378)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23382apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>378
                     /note="ultra-conserved element locus uce-5625"
BASE COUNT          126 a           57 c           97 g           98 t
ORIGIN      
        1 aacctgggga tggtgtgtct ttaattttgt ttagaacaga aaataactgc gatatgaaag
       61 gtttaatgag gttagaaatc taaaaggaaa tggagtggga atagattatc aagagaaata
      121 aagccaaccg ctggagagta cactaatatt aaatattagg tttctaaacc aaatatatat
      181 aatccattta gggacttaat ggtggttctc agaagcacat ttatctacag cttatggttc
      241 aacaaccaat attataactc catttgtcat tgttaggcga ggggaatgga tgtcagggag
      301 gcgagggtca gcagatgagg aggagctcag ctaccgcgtg ttacagacgg cactcggagg
      361 ggaagagctc acctgcag
//
LOCUS       KCKM01001480             903 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23397apa ultra-conserved element locus
            uce-4599, sequence.
ACCESSION   KCKM01001480
VERSION     KCKM01001480.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 903)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 903)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..903
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23397apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>903
                     /note="ultra-conserved element locus uce-4599"
BASE COUNT          281 a          168 c          150 g          304 t
ORIGIN      
        1 aaataaaact tgaataagcc tctgatttag gaaatgagca tgaaaaacct tcccaaaatt
       61 gcacaagctc ccattaactg tcatttaaat gttgtcaatc aaatctgttt gcatctggta
      121 ctgatgccat gtgaaattta tttatttaaa ctttcagtca cacatggaaa gttttgcaga
      181 tggtgtttct tctcatctgt gttttccaat ttcaccccca aactccagtt ctcactctct
      241 cgacccccca atttgattcc ttcttcttgt aaaaaaatag atctaatcag tagcatgtta
      301 aacaagaggg gatcttttat gtattctgtg ttaggacaag gaaagcatcg ctgtagatca
      361 ctagaataaa caactcgggc tgattcaatt acaatgcctg ggccaggctt ttatctgctg
      421 gtgacatcat ttcaatcaaa atgtaaaata atacaatcca atagatgcaa gagggagaga
      481 taggacacag actgctgcac ttagtcattt aataaaaaaa agtggaagaa agctctttct
      541 gacaggctgc taggacttcc atttccaaaa ctctattacc ttgtataata gtattcaaaa
      601 gaattgaatg caggaaattg tctattactt tttattagta gaagctgtta tgtaggatac
      661 agcctactgc actgtttttt ctttgttcct ttaattaaca aaagcatgaa atccttctat
      721 tggcaagcac ttgttccaaa gcttctgttg cattctgttt ttactgaaaa ggtgtttttt
      781 tcctctgctt tgctctgaat gtcctttttt tatatacaat aaaagtaatt ttttttcaag
      841 tcactgtaat ctaaagtcta tcagtcacct taatgggcta ggagaggata gaatgcagat
      901 aca
//
LOCUS       KCKM01001481            1091 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23412apa ultra-conserved element locus
            uce-2980, sequence.
ACCESSION   KCKM01001481
VERSION     KCKM01001481.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1091)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1091)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1091
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23412apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1091
                     /note="ultra-conserved element locus uce-2980"
BASE COUNT          360 a          202 c          217 g          312 t
ORIGIN      
        1 gaggacatca gatggattct atgactaaat gaaagaaatg catctatata aatatagata
       61 tatgttttga atagaagtgt cagtttatta atatgctcta tcactgttct tgccaaagca
      121 acctgtcatc tgacagaaaa ctgtttgtac taggcagccc agcaaatggc tgttgttttc
      181 agaagcagag ggtgctcagt gtaggcatct tccaacaatg aaatgtaatc attgcagcat
      241 tataacacct ccatcatgaa cttctgaaaa ctgaaacaaa acaaaaataa agaaacgaaa
      301 aacacaatgc aagctagaac ctacagcttg tctacttcag tggacattta ttacaattcg
      361 agttgcgaat aatgcagcta ccaagaccca gctaccttat gctccaggct ggagtcttta
      421 aacatcagtg aaaaaggctt gatatgctct cttctcaatt tatcgccact ccgtaagtcg
      481 atggtgtgct ctattcgctt gttaatttcc tcaggcccag actggacatg caaagcttgt
      541 gcaagatggt ttggaagcag atttattgaa tttcttgtta gggcagccag agtctagggg
      601 aaagcacatg caaacagaat aaacctgctg gtccccttgg gttaaaaatg caatgtttta
      661 gatcatgttg cattgcaaac ctttacagca ttccatgcaa ttcattcaat gaaatctaca
      721 gaagtgtaaa ataataagtc tgttccacta tacacataca gtacattaag ggaagtactt
      781 aaatgccctc ttttatagag agtaggaggt ttgctgctgt actgaacgct aggacttaca
      841 ttcccctttc cagattctgt taattaatta gagcatgcat gagggaagtt cacaccaaaa
      901 tcacagtagg atatctaact caatggtgtg ttctaacaac taagaacaga agctacagaa
      961 aacagaagtc acaaagcatg agtagggata tttttctgaa tcttaaattt actggatgtg
     1021 tgtagttaag gaacagattg gttaggcagg agtgaagaag gtgacattct tgattacttc
     1081 agcataagtt t
//
LOCUS       KCKM01001482             658 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23428apa ultra-conserved element locus
            uce-3083, sequence.
ACCESSION   KCKM01001482
VERSION     KCKM01001482.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 658)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 658)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..658
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23428apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>658
                     /note="ultra-conserved element locus uce-3083"
BASE COUNT          202 a          108 c          125 g          223 t
ORIGIN      
        1 ttagactgcc actgtttgtt tacagcaaaa gattgcattt cttctgactg tatcatgttt
       61 aattgaccaa gttacaaata aagctgaact acaccaaaat gttgtttttc caggctttga
      121 gggattataa aatgaccttg tcaactcctg gaggataaca tattttgcag ttaaagtgag
      181 atttttttcc tgctgaaaat tgcctcttgt ttttgttatt gtaagaactg gtccgctgaa
      241 cttagcacag cctccgaggt ctcggtgaga atcctatgat taatgaggta gccattaatg
      301 tcagtagatt gaacaactga aatctgatta tattaaagtg cttcccaaac attagggtca
      361 cattaacagt ttattgaaac aagctgataa aatttaaaat ggtcatctaa ttccctaggg
      421 ttcctaattg ttgcatgata aatcactctg tagagaaatc tattacaatg ttccaaatga
      481 gaaaatgtaa tttactgtac cattagtggg gtgtttgaag cacatcagtt ctttcatggg
      541 ggagttttgc cagaataaga caaaactctg tgtatggagt tttccatttc ttttagttca
      601 agataatgct tatgccttga gctgcctaaa ttgcataaga aaaatgaggc atcttatg
//
LOCUS       KCKM01001483             379 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23442apa ultra-conserved element locus
            uce-6321, sequence.
ACCESSION   KCKM01001483
VERSION     KCKM01001483.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 379)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 379)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..379
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23442apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>379
                     /note="ultra-conserved element locus uce-6321"
BASE COUNT          102 a           78 c           92 g          107 t
ORIGIN      
        1 gcaatgaagc aacttctcat acattttggg tgtcctggga cagtgcgtgt agtaggggag
       61 agccctgtgc attctttgtc atggcaccct gacttgaagg gagaggagaa tatttattcc
      121 caacgcatag agatgaaact tcactctgca aaatggccaa agcaatcagc gagtgatgga
      181 gtatctgcta aaaagaaacc tggcatttaa ttaacttttc aaagtgctgg ttcagcaacc
      241 tccatgtttt acattttgaa tattgaacaa gcgtccctaa tcgggactga attacttctg
      301 ggcttgctgg ggtggagagc aagggagctg ccatttgcca gtgcctcctc cgttattatt
      361 atgaactctg gttaactca
//
LOCUS       KCKM01001484             623 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23456apa ultra-conserved element locus
            uce-6088, sequence.
ACCESSION   KCKM01001484
VERSION     KCKM01001484.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 623)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 623)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23456apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>623
                     /note="ultra-conserved element locus uce-6088"
BASE COUNT          131 a          127 c          147 g          218 t
ORIGIN      
        1 ccacccgccc ctcttttcct ttctctctct gtgggtaaat agctaattcc tttgttcctt
       61 gctgcactat ttcatttctg ccatcattgt cctcattgtt ctccgaaaca ggaggggtct
      121 gggccaggag cagccaaggt cttggctaat gacgggaagt ctttaaagtt tgcgctgcat
      181 ttcatcttct ctgtgggagt tttaggacgc atccagtgtt tgatccccac catgcaactt
      241 tgcttctagt taattaacag atccccatta cactctctca tctgcaagca catgggaggc
      301 ctatcaggag gtaattcaag gccaatctga gtgatggcag aaattagaga aaacggttgt
      361 tttagggttc taacatgcaa gtataaagtt cttcctttgc agaggtgcct tgtaaatttg
      421 ggcttgtttt gttgtatcat tttaagtttt taagtgatct cctttgcagt agggtctggt
      481 ttggcggttt ttttttttag gaagtgtaga tggtacgaca gtttatttgt tttgctcctg
      541 ctttgctgtg ctggcagcct gcatggtgta tggttttgag ggccagctga aacgaaacca
      601 cagggttatt agcaagatgt ttt
//
LOCUS       KCKM01001485             547 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23471apa ultra-conserved element locus
            uce-4259, sequence.
ACCESSION   KCKM01001485
VERSION     KCKM01001485.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 547)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 547)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23471apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>547
                     /note="ultra-conserved element locus uce-4259"
BASE COUNT          163 a          128 c          106 g          150 t
ORIGIN      
        1 tttcttttta cagtgtacaa tttagctaat aactggttgg ggccaatctt taacaagtca
       61 catatttcca ttgtcccttc accccctgct tatgctttta ccacatccta acaaaaacat
      121 gaccagaact ggtgaaaaac atacggttcc aactaatgaa tcacatactt tcccgcaagt
      181 gcagtaagta ctaccagctg tgacagtctt gctttggcag tggaaccagt gcagaacaag
      241 gccgacacat ctgaaaccag ctgtactgaa aaaccacaag caatttaggt ccgtctgcct
      301 tctcaggggc ttctttgtct ctgtctgtgt ctctgctctg tccctaaaac ttgccagcca
      361 tcttgttttg acagagttca gagttataga agtttcaagg gggaaaaaaa tccgctgaat
      421 caggaaactg ggtttcaaga aaatgataag gaggtctttg tcaaaccagc cagagtcagg
      481 aaatttaaag agacagagta tgcatctacc catctgctct gcttatatga cagcttgcag
      541 cacaaaa
//
LOCUS       KCKM01001486             741 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23485apa ultra-conserved element locus
            uce-3668, sequence.
ACCESSION   KCKM01001486
VERSION     KCKM01001486.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 741)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 741)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..741
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23485apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>741
                     /note="ultra-conserved element locus uce-3668"
BASE COUNT          225 a          117 c          154 g          245 t
ORIGIN      
        1 aagaagcaag tctgttacta aaggatttta agatacagtg gagatgtgaa aggcacagaa
       61 gattttcatt tcctgtgtta tagggtgcaa ataatatcag tatgaaaaac ctggcaggaa
      121 gatttaagat agcagttttt acattgataa gtatttgttc atttcctgac aacaaaaaat
      181 ataaatctct tcagaaatta aataccctgg cttgttgaag cacttttgtg acgttctgtg
      241 gtagactggc ttcctttcat tggaaatcca cagctagaat aataatcaca gcatcagtta
      301 ttatacttgt atcagttctg tgcggcaaga ggctaataca gtgtatggcc gaattctcct
      361 acttttgtgt cacttatttt ctctgtgggc cagatttgca ttttaatgga agtagtttat
      421 agacttcttt gctgccttca tagtgccaca agtggcatca ttaagtgagt taagccggat
      481 taatgctgat agtaaagtca gataatacaa taacagaggc cttcatttcc atttggatta
      541 ggtgaagaga gcaggcctgt ctggtgcagg gtgataattt gtaagcgcga tatgttgtac
      601 ttgagaggat aagattaaat ttagtgggtt taactgtcat cccagtaagt caattacttc
      661 atcttttcag gctttgaatt tattttataa ataaaataaa tggaatattg agctgctcca
      721 cagccaattc gagcttccat g
//
LOCUS       KCKM01001487             799 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23501apa ultra-conserved element locus
            uce-7495, sequence.
ACCESSION   KCKM01001487
VERSION     KCKM01001487.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 799)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 799)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..799
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23501apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>799
                     /note="ultra-conserved element locus uce-7495"
BASE COUNT          254 a          137 c          136 g          272 t
ORIGIN      
        1 acagacaacg agtttttgtt cctattctta gcctacattt tggcaggtct tcattttaag
       61 tgtatgtctt gcatatttat ctcactcttt cactaaatgc atttaaaatt ttgacttggc
      121 ttacagatcc ttgctcttgg tgttactgta atgtccgtac atctaattga taagttatga
      181 tgcattttct gtagctttaa ccagtcattt aaaataaata agatcataat tatcagtttc
      241 catttaccca tttaagtaac aatgctcaca ctgagcagtt tgattttgtg ttacagtaag
      301 gcagtctcta cacgatgaca gatggtgttt cattttgccg acgctgtgct aaagtgctgt
      361 gagttgtgat gtgtttgatt ttattagaga tcagatttaa cacatgcatg ctacataact
      421 gcaatagcat tcccatttct catctgcagg agaaaatgaa actgtgatga aatgtaatat
      481 actcaccctc aggcagaact agtgggattg ggaattgcaa cataataaat ctaatggata
      541 ttgcactaca ggacactaga aatttactgt tattatgttc agggaaggaa cttggttttg
      601 taaaactcgc ttttatttca ctggcatcag tgcaatttca cattatttaa ccattatatc
      661 ccaacagttt gttacattga aaaagtaacc taaactcaga ggaacagagg agtaaaagaa
      721 cccaaaacca aagacacaaa ttctgaataa atgactgaaa ttattaactg ctttgtcaaa
      781 cagtaatttg tagttaata
//
LOCUS       KCKM01001488             811 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23516apa ultra-conserved element locus
            uce-6699, sequence.
ACCESSION   KCKM01001488
VERSION     KCKM01001488.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 811)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 811)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..811
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23516apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>811
                     /note="ultra-conserved element locus uce-6699"
BASE COUNT          229 a          165 c          166 g          251 t
ORIGIN      
        1 gtgtgttgct tggggattct catggatgaa agttgcttat ataagtgtaa atcactgatt
       61 ttatagcagt aaatccttcc attatttcct ggctctccag accctgtgac acagtatgtc
      121 ctgtgctgtc atatgtgtga gaaggctttt tatggggagc aatcaggctg gatcccaatc
      181 tccactgcag tttttttcta attaaattgt caccggaagg aatatctgga acagcagttt
      241 tcattttcaa tcgaggttat gagtctttgt catttgatta aaagttactt aacctttaaa
      301 ttgctacaga tgtaaagata gctctgagtt tccaatgtaa tcgcctccaa gttaaaatca
      361 ggaaaatctt tgtgtaatga aacccatatg tcatagtgaa aggatgcaaa gcactggcag
      421 agtgggctgc tctagcagga gattctgcac ccaatcttgt taaccaggac tgcttttggt
      481 aatcccttat ctcctcactt gtaggaaatc aatctgtact actgaatctt ttcaaccagc
      541 aaccacaaaa tttactgcgg agaggcaact tggggacaat tgtagtagaa aaggagcccc
      601 aggcaacaag gctaaatgcg ggattgaggg attgaagttc taaagaggag attatattaa
      661 accttattct gctcccctat caagtagaaa tgtctcctcc tttcagcccc agcctttcct
      721 acccaatacc tgtttttgag gtctgcctgg gagatcttgc caggcagcaa acttaattca
      781 tacagtaccg cattatctgt taattgtaat a
//
LOCUS       KCKM01001489             460 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23531apa ultra-conserved element locus
            uce-1581, sequence.
ACCESSION   KCKM01001489
VERSION     KCKM01001489.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 460)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 460)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23531apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>460
                     /note="ultra-conserved element locus uce-1581"
BASE COUNT          156 a           87 c           95 g          122 t
ORIGIN      
        1 aaaaaaaaaa agtttgaaag cccaaagcta gacaaaggcc ccagagctgc actgcgccgc
       61 taaaaactcc ggagtcagca acttctattg attaaaaact aacctttaaa gtaactcgca
      121 gagtgtgtgg ttagcattta aatttaaaca tgtcatgagt tgatttgtgt tactgaatac
      181 caactcagaa ggagttacat tcacatcaga tttttttttt tctaattccc ttaagcagct
      241 aaagtatttc atgaaatgtc aatagggcag gggagaaaaa aaaggtgttt tggagggagg
      301 ggactcgcgc ccagcctcgc cgtttctttt cccatgcaaa tagtcacccc aaaaagaaaa
      361 gtgtggggag cgacacacaa taattagacc tttgtctaac tttcccaagt gccagagaaa
      421 gacagattaa ttaaatatac aacagtgttg gtttttggag
//
LOCUS       KCKM01001490             843 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23546apa ultra-conserved element locus
            uce-6048, sequence.
ACCESSION   KCKM01001490
VERSION     KCKM01001490.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 843)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 843)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..843
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23546apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>843
                     /note="ultra-conserved element locus uce-6048"
BASE COUNT          251 a          141 c          162 g          289 t
ORIGIN      
        1 aaacaagtaa gttgttttcg attaagggca tcgtctcagt gctcagtaaa cacacaagat
       61 tgtttatttg tgagcttgat gttgttagaa aatgcatatt aggagtccag ttcagcttgt
      121 gtttggacct aactaaaaac aacaaagatg aagcataata atagaaaaat gatgcctgta
      181 ataagcctgt gttgtagatg attttgatag ttcatttcat attgttgata atgtatggat
      241 actcctaatg attccattag agtttaaata acagaattca gcaagaatat atttctactg
      301 agcaatagaa acataatttc tctggaactg cagctgctgt agttgaagat taggctctta
      361 ctgttcctta gggagattac tgtctctgcc agctgactta gtttttatac ggccagcgat
      421 ttattagatt gctttgctct taagtgtgat aataggcctt atgcttacca aggtttagag
      481 acttccagtg cattaatatt ttatggcaat gacagtcagg acacattttg tttacctaac
      541 aagacaagcc aagctacagc tgatgtgcgt tggagattag atttaactgg tgggaaatcc
      601 gccaattatg tctttaatgc tttgcaatga cttttataat cgtaatccaa tcatttacat
      661 atttgatgca tcaacatttt gttctaaaca gtgctatttt gtgtgaccca agaatttata
      721 ggcaacctct tctttgcagc agtgctcctc agttctttgg tattgacata ttttctttgg
      781 gtattagatc agctataaca atattttgag gccgaaacag cctccagtca ggatgccata
      841 tca
//
LOCUS       KCKM01001491             877 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23560apa ultra-conserved element locus
            uce-4566, sequence.
ACCESSION   KCKM01001491
VERSION     KCKM01001491.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 877)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 877)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..877
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23560apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>877
                     /note="ultra-conserved element locus uce-4566"
BASE COUNT          275 a          144 c          191 g          267 t
ORIGIN      
        1 gcagagtgac taaaaacttg taaaagcagt agaaatgaac ttcctcatgg aaaagagaaa
       61 agtgagttta accttctcca gggcattgga aaggataaca gtggaaaggc ataataatac
      121 aatagcaatg cacaggaata aatatgcaga agagaataga gatacatgta agagatggtg
      181 agaaatttta gcttgtacat aaagaagagc tgatggtgtt gcagttgcct gcttttatca
      241 cttggcactg atctcagcaa tgaaatccat ttaaatgaaa tctctgttgc tgtatccatc
      301 catgctcttg gtttgattta ctaacacagt agtgatttaa aactgatgaa gagttgtaat
      361 caagtgttac tgtttttatt tgacaggccg gacctgatag acatgaatac cgttgctgtt
      421 caaagcaacc ttgcaaattt agaacatgct ttttttgtag cagaaaaact tggcgttgcc
      481 agacttctgg atcctgaagg taagatagct gcaaaggact ttgttacact aacattaaaa
      541 caaagtccag tctgcctgca ggttgtgtca tattggtgag cattgaaaca acttcatgat
      601 aaagcgctgt tctgtttgct cttttagatg ttgatgtttc ctcacctgat gagaaatcgg
      661 tgataactta tgtctcatca ctttatgatg cgtttcccaa agtaccagaa ggtggtgaag
      721 gcatcagtgc aaatgtaagt aggagaaaaa aacttgtgca gtgtatgagc ttcattaata
      781 aaattcttga tctcagctcc aggatcttct gtaggactac tgttgcactt ttctttgaca
      841 tgattttcta ggttgagatt ttagaggctc agcagct
//
LOCUS       KCKM01001492             502 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23576apa ultra-conserved element locus
            uce-4513, sequence.
ACCESSION   KCKM01001492
VERSION     KCKM01001492.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 502)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 502)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23576apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>502
                     /note="ultra-conserved element locus uce-4513"
BASE COUNT          162 a           85 c           94 g          161 t
ORIGIN      
        1 tatatggcaa acttcaccaa cagttttaag agatcttaaa atataataaa atcaataaac
       61 gatgttctgg cataaatgtt tctgtagctg agggtggtca ggttcaaagg gcaaaatctg
      121 accatttctc tttcccaccc tgctgcggag taagaccctc ccctcaactt caaatcactg
      181 gggagagggt aatttaagct atacttgatg taccctatac atcactgtct tcaggaccag
      241 gtttaaaatt aaactctgat gtacaaagtt aaacaaaaat gagataaaaa ttggcagggg
      301 ttgaagaggg tcaaagtagt caaaacacaa ggtagactat tgcttctttt gatttatgtt
      361 attctgtgca ctaaaaaaaa ataaaattat ggctctcgtg gagacttttt tcattgagaa
      421 taacgcattc ctaatttgtt ttctatagac tttacagggc attttctctg ggagacggaa
      481 ggctttattt atttatttat tt
//
LOCUS       KCKM01001493             694 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23590apa ultra-conserved element locus
            uce-777, sequence.
ACCESSION   KCKM01001493
VERSION     KCKM01001493.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 694)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 694)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..694
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23590apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>694
                     /note="ultra-conserved element locus uce-777"
BASE COUNT          246 a          115 c          136 g          197 t
ORIGIN      
        1 tttttttcct ttttttcttc aataaatgat ggaaagctaa agacaaaaac aaccctaaaa
       61 tattttaaaa gaagagaaac ctatttgcag tttcagaaac taggtaaaag aatgcttttg
      121 taatagattt catgcagcag ttggcattgg cagtactgca aaaagagatg tattctgtcg
      181 tgctctgttt gatcaagtgc taaacccgtg tgatcaatag agagacagat gtcgggtgca
      241 gatggcgatg ccgtgatacc tggggcagag tgggcctgcc agaatgacag aatgggaaca
      301 aggaagagca gcaatgcaac agaatgtgac aaatgaaatt agggtttata ctagtcgata
      361 atttacagct aatagaaagt gacagaattt ttcagcatac agcacatttg ctctcgtaat
      421 actatagtca atgcattttt catgcaaaac aataggagct gctatgaaga ctaggctcta
      481 gctatatgta ttttgttaca ttgcaacttg tacaatcgat ttttaaacaa agctactaac
      541 atcaaatttc aagtaagcac caagtatatg aaacaagatt gtattttcaa ccttgaaatg
      601 agtccatctg atactcagat tgtgtagcag acctccaaca agaaaacgaa gacattatta
      661 cctgtttata tgaatataaa gtagagatcc acca
//
LOCUS       KCKM01001494            1013 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23606apa ultra-conserved element locus
            uce-1904, sequence.
ACCESSION   KCKM01001494
VERSION     KCKM01001494.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1013)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1013)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1013
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23606apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1013
                     /note="ultra-conserved element locus uce-1904"
BASE COUNT          326 a          171 c          204 g          312 t
ORIGIN      
        1 cagaaaggtt tgattgcagc cattatttta gttcattaaa gaaaatgaag taattacttt
       61 taaaaagaaa catgcacaag cacagtacca gttcaagtac acataatatg tgtacttaca
      121 atcttttttc aagaaggcag gtagaattta actgcgtgtt gttttctctt gaaatacttc
      181 aggcctcttt ttatgatagg ttcaaaattc tcagaggcta tcctgttgtg tgacaggagt
      241 ttacagcatt agtttcacca gacaaggcct ggtggagtaa aattagtcat gtatgtaaat
      301 tataatcatg ctgaatagtt gtatgtgctc atttaggcat tttaacagtg tgtgatgtta
      361 tcctctctgc aggactaata agcattagcc ataatgaggt cagtcagtca gtcaggcatt
      421 atcatgggat ttaattggga cactggtctc tgctgaagtg aaaattaata acttttgtca
      481 atgttctggt gaaatgttct gtcttattaa actatgaggg tcaattagaa agcattatgt
      541 aataaagtcc ccagcagcag aactcaaatt gagttatacc acagtcatta ttccaggacg
      601 attgcatttg aaaatggaaa accagagtgc catatggagg gtgcaggtta tatttacaag
      661 cattgcatgt taaagcttcg gcaagaagga aacaattaaa tgtaatactg aaataaatca
      721 aagcactgaa agtgccatgt tgtgccaggc gcttaatata gccagcatac ccctagatgc
      781 aactaggcaa aatggcacct gtttataagc cttgtttggt ttctgtcaga cagtgtcctc
      841 cctctggatc gctccaatga ttcaaaatct ggggcacacc tggaaggctc agccaggcat
      901 gttgactcat ataaataaca gtttattgta tggctattaa gactagagac tgcttttatt
      961 aaaacacggt tatcatgata caacaaatta aagaactttt agagcatgtt taa
//
LOCUS       KCKM01001495            1059 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23622apa ultra-conserved element locus
            uce-7576, sequence.
ACCESSION   KCKM01001495
VERSION     KCKM01001495.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1059)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1059)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1059
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23622apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1059
                     /note="ultra-conserved element locus uce-7576"
BASE COUNT          339 a          216 c          185 g          319 t
ORIGIN      
        1 tacttttaaa atttttactt aaaatatgag caaatgcagc aattttcatt gatacgatgg
       61 aaacagccag tatattttaa gttatcacct agtaatttgg gcacattaaa ccccattctc
      121 tgtcttttgt ttattaatcc actatgccag atatcacagt ttcactcagc aaccctcatg
      181 ttttggatga tattgaaaaa tggctcatgg ttgtcaaaga aagcaaaaag aaaagaaaag
      241 aaaaaaaagg taaagaggaa aaaaagtgtt gtttatagaa gccagctgct ctggcttcgg
      301 cgccagcagc tcttcatcct gctattttac gctcgcagcc cccactgccc ccactggcac
      361 aggtacaact aaacgttgac ttcaatgctt cagagagcac tcaactgatt ctgtacatga
      421 ttaattgcca aagacatggc tgaccatatg gaacagagaa agcatcaagt aattcatact
      481 tctgtatatg atcatttggc ccctgttgtt ttaatgtaca ggaaagagct agtatagcac
      541 agacctggtg tcttgccctt gacagcccat taagaaatct caaagcacct agttgaagtt
      601 atgctgttgg cttttcaata gcagcctaat aaaacagaag caaagctttc caactagtct
      661 taaatctttc acatacagta cattaaccac tgctgctaaa acaactggtt tcttatgata
      721 ggaaatggga tttgatttct agcctctgca tacttactga aagccttttt ctgacctttg
      781 gagggtttac aaaatcattg ttcgtttttc ctcccatttt cccagtttct tgccatggtg
      841 atcctaatag atttgtttaa ggttcagtac attctactct tactagctgt tagatgcaaa
      901 ctgtacaatg aatggaggct catgggaaca gacaggaaag aaattattat taactgtttt
      961 cttcctgaga gtcaaagaag tcaccgcaac atcttttaaa gagcctataa aatcaaacaa
     1021 aaaattcctg aaaagcagca aaacactagc ttgtgcttt
//
LOCUS       KCKM01001496             920 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23637apa ultra-conserved element locus
            uce-7370, sequence.
ACCESSION   KCKM01001496
VERSION     KCKM01001496.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 920)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 920)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..920
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23637apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>920
                     /note="ultra-conserved element locus uce-7370"
BASE COUNT          281 a          197 c          152 g          290 t
ORIGIN      
        1 gaggggaaag cagcccctaa aaatgacttg gttaagttgt gccaagcagg acacgctcag
       61 cacacagcct gcttagcact cccgaaccgt gctggccaag taaccagttc agatgtttat
      121 ggaggtttct ttctgagggc tgaaaacttg catctgtgct tccagttcaa gttctctcac
      181 gaatttgaac aaaaagcttg taaagttcag catcttccaa attgccccat ataagtcact
      241 actgaaacca tatccaaatg tctccgcccc caccatacct tccacagaaa tgacctaaac
      301 tttgtcaggt tcacatgtcc ctagagatga tctcatttca ctgcttcaaa agagctttgg
      361 tctgcacagc ctgtagcagc aaatttacac ttcaaaaagc agacagcttt ttccacatct
      421 tattcactta atgggtgaga atgtaaaatt agttccgttg ctgatgagga ccttgagcca
      481 aatgaaaagt gttcatttgt cagcacagac ttacagcctg aaacatgatt atatagctaa
      541 tccaataatg ggttttgatg ctgagcattt atttatatac agtatgtctt gttatctgtt
      601 gataatcagg ctctacaatt tactctcttt tgtgtcatta gacatagcaa catcttcaga
      661 catattacat ttgcgtgtca acatacaaac acacacaaaa cctttctgat caaaatactc
      721 tttgcctatt tgccttgaaa cagcatttga atttgagctt tttgtagttt aaaatactag
      781 tagcaaatta atcattttag actgagaacc tctctgcatc ttagaagcct taatagatga
      841 aaatttgaaa cataaatttt gtttccttat ctataacatc atatgaaatg atttaacctt
      901 tttttgcctg atgtgaatac
//
LOCUS       KCKM01001497             300 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23652apa ultra-conserved element locus
            uce-4609, sequence.
ACCESSION   KCKM01001497
VERSION     KCKM01001497.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 300)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 300)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23652apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>300
                     /note="ultra-conserved element locus uce-4609"
BASE COUNT           96 a           67 c           65 g           72 t
ORIGIN      
        1 tcgtggtcat gggaaaacaa aacacaccaa atggagcagt tattaattca ataaatccag
       61 ctgctctcag tgctctgggc aaaaggcaaa gttaaaagca gctgctcatt gacgacatgt
      121 gcgacctgac caggggaagg tagctgtttt agcacatcat ccaccacttt gaaggctgac
      181 tgcactcaat ttcttagaca atctacacac cattttcagt tctgtacctc cataatttat
      241 cacaacaata cctcaagcat acagatgggg gtgggggggc agggaaatga aagcaattta
//
LOCUS       KCKM01001498            1213 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23667apa ultra-conserved element locus
            uce-1278, sequence.
ACCESSION   KCKM01001498
VERSION     KCKM01001498.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1213)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1213)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1213
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23667apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1213
                     /note="ultra-conserved element locus uce-1278"
BASE COUNT          343 a          225 c          233 g          412 t
ORIGIN      
        1 atccagatga gtccaattat tgcaattaaa gtgaacagaa aggatgcatg agaatatgcc
       61 aggtaggttc tctttaaagg cagctgctga tttatttgat aggtgaattc agcatatgag
      121 aggagggagg aaattcttac ttaaactccc aaggaccaca ccttacctct gcgtttaggc
      181 aaatgcttct gcaaaattat tacctgtgca ccaagggtta aaaatctcca aaagattttt
      241 tcccccctgc atttgaatat aaaagtgctg aagcagtgaa tactgtcaga taagtaaaaa
      301 tcgtttgtgc tttgttgttt ttccttttgt gtctccttaa tgctttattg tggtcttaag
      361 tcccttttag catttgcata aagttcacga tagatccctc tttaatgacg tgctgatcat
      421 tagatacctg tgtgtcaata acatgctctg atgctatgtt ccattgacag tcacaccgtg
      481 cccctccatc tgcttttgtt ttgaccctat ctttgaactt tatcttggtt gctggccagt
      541 agttttccct ttaattacaa gaaggaaact gtcaataaaa tctgttaaat gggatgcaat
      601 gagtggcttg aatgggcgga cggctatttg ttcaaattct gcagcattca aggtattgac
      661 agtttgtttt ctggggccat atgtgacgat caatctcagg ctgggctcag ccgcgctgaa
      721 aaatgaaaaa ccagattgct tttgcttact tgtggatgac gacttgtgat ttggcgcggt
      781 cctagtgaga tgagaccttc tgcccaaatt gcccccctga gagacaggac gcgtgactgt
      841 ttttagaaat aattttttaa ttgattttgt aattaacagt tcatctacaa tattgatgcg
      901 tgaatcctca gattgatagg agggaaattg ttttcaacaa tgaagttgta ctttcctatt
      961 tgtctttgta atgtgattta gcactctgca tttttaattg gaaatataat tcaaaaacat
     1021 gcaaagccaa agtgcttatt agtttctttg ttaaatattc tccaccccac taactctgcc
     1081 cttagttttc gaacattatc ttatttccag aataaacaaa atgctgaaaa gcccctcaaa
     1141 gattgaaatt aattttaact gaagatttat ttacaatttt tgaccattgt aaatagacac
     1201 ttgaggatgc ctt
//
LOCUS       KCKM01001499             451 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23683apa ultra-conserved element locus
            uce-362, sequence.
ACCESSION   KCKM01001499
VERSION     KCKM01001499.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 451)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 451)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23683apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>451
                     /note="ultra-conserved element locus uce-362"
BASE COUNT          147 a           71 c           80 g          153 t
ORIGIN      
        1 agaaaaaaaa tcagcaaaat gaaacaaatt gctcataaat cacattaata agtggggttt
       61 taactatctg tagcatgtag aatattaaca tctgatgtgc ctatgaatag tcattcctac
      121 tagtatacat taaatgttgt aattggttta aatcagcatg ggccatctgt ctttaatact
      181 cttattacaa ggcagtaagc agagaactat tagagctgca gtataagctg taagatcttt
      241 acccgttctt aaatcattta aaaataatga gagctttagc ctttatctaa ttaacgagtg
      301 ccttctttga attagaaaaa ctgtatcatt tagcccacgg ttgtttagta aattggcttg
      361 gtggcatgta agctaatgca gggtagcagt tgcagtgtct tgttcctggc ttcttattac
      421 ttgaattata attcaatgat caccttagat c
//
LOCUS       KCKM01001500             859 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23699apa ultra-conserved element locus
            uce-5296, sequence.
ACCESSION   KCKM01001500
VERSION     KCKM01001500.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 859)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 859)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..859
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23699apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>859
                     /note="ultra-conserved element locus uce-5296"
BASE COUNT          292 a          137 c          168 g          262 t
ORIGIN      
        1 aaacaatatg cttaatgcag aataaaccac attttatgaa aagaggtcat ctttgggggg
       61 agggagcgaa acaattgaaa agaaaaaatg tagcacaaga gggaattatg aatttttttt
      121 tccttatgga aagtatttac atgtttattt taagcctaac ataaatgtaa atattttaaa
      181 caaacaaaaa cacaccaggg gtaacaatag agtattgttt tttttatgtt gaataaaaac
      241 tgccaggaca gtgcatgtat atttttaaac atgctgcttc aaaaagcagg atgcaaggga
      301 tgttgcatct ttaatttttc tgttaattat ggattgagca ttgttgtgag tcttgtcctc
      361 aaaacccagc tcagaaaata agagcagatg ctcataccca ggtttggctc atgtgggaat
      421 tgaacagaac atattggttt ataattaatg taatttgttg gattatcttt tgtgaaggaa
      481 ctaaggtaaa caaccttgca gcattgtagt gaaattcttc tgtgctcaga gcctctgtac
      541 ttgacggagg atgacaaaaa aactactctt cctcctggat tgcaggaaga tttggaaatg
      601 tctgtcacat tcaagcatat tttaattaac tcaaaggaaa aaattaggct acggacccta
      661 aagcaaatta caaatagtgt ttaaaatcaa gagctaatga ttccccaatt gactattctg
      721 attaacagaa gtctcttttc tagttggctg taattttgtt atggggcaaa gatggaggag
      781 gaacatcctt ttcagccctg agaacagtag ctgctcttca gaccaaattc actgatccaa
      841 aaggctctgg ccacacact
//
LOCUS       KCKM01001501            1035 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23715apa ultra-conserved element locus
            uce-783, sequence.
ACCESSION   KCKM01001501
VERSION     KCKM01001501.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1035)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1035)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23715apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1035
                     /note="ultra-conserved element locus uce-783"
BASE COUNT          316 a          193 c          216 g          310 t
ORIGIN      
        1 tgtaactcgg aaagacgatt tggaaaggtt ttcatcaaag tgattttctg cagatagctc
       61 ataggtgatc aggataaaac cccacagctt cagcacttca aatatttatc atatacatgt
      121 ttgcttgaat cttgataagg gtgaggtttg ggacttatgg acaccgagat aggatgtcac
      181 ctgagacatt catctgattc caaatgcaga cagaaagaaa gtgcctagaa gaggccagaa
      241 gagagaggga gggagagagt aagggatagt aggaatggac agccctcgtt cccagctcta
      301 atatcccagt gcaattattt tgtggacatc cactccttgc ctgcacagga gatagggcta
      361 taagtgtatg ttatttttta attacaaggg agtagaaaaa atcctgatga tgggctggaa
      421 ggtgccattg cattgttatt tttttctctc ccttcgtttg ctgattatgt gagctgggct
      481 cctttgctag ccgatgataa gcagaatttc catgttctct gcataattaa tccatctctg
      541 cctctcttca tgccaactcg cccgttatcg ccggcacatg cctgaattgc aaaagaatcc
      601 gctcttcaat tggaacttat tgatattcta agaaaaaaaa gagagaggga aaaaaactga
      661 aaatccttaa gtttaagccg cagattttta aatggattaa tttcgctgca atcgcagcca
      721 tctaaggcgg gaaggcaggc agagcaaatt gaaagcatct ccatgtttgc agaattgggt
      781 ccagaatgct gaaatgtact ggcacagttc tcttttaaag tcagaaaatt accattcatt
      841 tacatcacat gaaatacttt tttatgctag aaatattcaa gagacgttcc ttaaatgcct
      901 gctaatgcta gataacattt ctaactttca acattttgct agactttgat atgacatgat
      961 aggaatgcct gccagtgagg aatattatat gtaccagtaa tctcttttta tcacatattt
     1021 agattgtatc atcat
//
LOCUS       KCKM01001502             973 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23728apa ultra-conserved element locus
            uce-1660, sequence.
ACCESSION   KCKM01001502
VERSION     KCKM01001502.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 973)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 973)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..973
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23728apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>973
                     /note="ultra-conserved element locus uce-1660"
BASE COUNT          306 a          177 c          154 g          336 t
ORIGIN      
        1 cagctgagtt ataaacccct gaaaaacagg atttataatg gaaacgctga cacaacctta
       61 accatagcag tgctatctgg tgctgctgta atatactgta cgaagaaatc agttcattag
      121 ttagttataa acaaaggaca gagatagtaa attacagtag gtatttcagc agttttctat
      181 atatttatga cacaaaaata tgcagctgca ttttatttct tgagacagta tttaaggatt
      241 tcagatttaa tacacattag tttggttatg catatcgtgc attttgttct tactgttccc
      301 tcttgtagtt ttattcatgg tattttcttc tttctctgtt gctcattaga aaaatgttaa
      361 aaatccattt tcatctgatt aataataaag ctgatcacat gtaacctaat tttcattcac
      421 tgctgcccct gtctgtggag tcatatacaa agtgaccttt gaatcaccac tgggcccata
      481 aagcacaata agcaccattg tcctgtcaaa aattgaagat gttttacatc attacaaaat
      541 ttaatgttcc atcttttcaa atgcactact tttcaaaggc cacattccaa ttgaagctca
      601 ttaaaatcag actcaagttt cctgtggtgg ggatgagaaa gagtttctca tgcattcggg
      661 gtaatatgaa tcactctttt aaaacagata tggttacata ttagttttga aaggtacagt
      721 aactgctgag cctccactgt ctgcaacagt gaggcttttg tgcttataaa tctaataact
      781 gcctcctgat cccttgtact tcatccacac tgtatcctat ttacttatga ataaatcaac
      841 tttctaaata aaattgttgt tcaaaagttc aggggttgaa ttataggagt ctctggctca
      901 aagcttctat taaggtttta gcagacatct gtaaaactct tgttaaaaaa aaaatcgttt
      961 tttctcaaaa ctc
//
LOCUS       KCKM01001503             792 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23743apa ultra-conserved element locus
            uce-5617, sequence.
ACCESSION   KCKM01001503
VERSION     KCKM01001503.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 792)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 792)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..792
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23743apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>792
                     /note="ultra-conserved element locus uce-5617"
BASE COUNT          267 a          128 c          169 g          228 t
ORIGIN      
        1 acatttcttt cccagttgat atgatatgac agaaagaaaa cacaatctct aagctctttg
       61 ggacagccag tgtgattaaa tttcctgact gtggctgtac tgtatgttat gtgaatgtaa
      121 tttttttgtg gatgtatttc aatttttatg caatggtact aattagcctc tagtatcatt
      181 ttttcacgaa atatgtcact ctgttcacag gacattttaa ggcgaagagg aggcaggaaa
      241 tgggttcttt ttctatatca gatttaacat ctgctgcatg tatggataac agattctgag
      301 gtgaactgct gagtgtgtca cagtaagact ggcagagtta agtgtggaaa gtcagtttga
      361 gcacatgctg taatggattt gacctcgaag agcactgcga agagaaattg cagataacca
      421 tctgaactgt cttcagaagc ctgtagccct gactccctgg ataccaagag aaaagagaag
      481 gactaaatag atggaatgaa caatcagaaa tacaaggttg aataaatgct taatatttga
      541 agtgctgaca gtagaacaaa acacagaagt gcaatacatt tccctacttg attccaacta
      601 cattaggaaa gtaaaattcc tgaaaaagca gttttataga agtaagttac atgttcaata
      661 gaagcgagat gtgaaagtat cattggaaca atgaagacat gtacctggga agatcttagg
      721 catttttcca tggcaaagca attactgatt aagaactcca agcagaaagt aagaatgcat
      781 tcttcccagc ag
//
LOCUS       KCKM01001504             672 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23759apa ultra-conserved element locus
            uce-7886, sequence.
ACCESSION   KCKM01001504
VERSION     KCKM01001504.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 672)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 672)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23759apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>672
                     /note="ultra-conserved element locus uce-7886"
BASE COUNT          212 a          116 c           97 g          247 t
ORIGIN      
        1 attctttctt ctgaggctga cttccatttt gaaaggtaat agcttcttct ccacagaact
       61 tccaagccac ccagctgtaa gattgcatta cagttgcaaa atttagtctt tataatagca
      121 tattacatgg ctggggtgaa actgagtctt caaagaacat gttaatcaga tgcaataatg
      181 gtaacttatt ttgatgggtt tggaaccacg agttggttaa gtggtttgcc attttttttt
      241 tctcctgcag tccaggttct actttatttt tttcttgaca atgctgtgta aaacaaagac
      301 atagctttta aaactgtcta actaatatga tgaatgtcaa tcacttaaaa aactccactg
      361 tagcataaac acatactgta tacagctttt attctgaatt agaataattg aatcaatgac
      421 agtgatttgc caggatgtca aatctatcca tcatatcctg tcactaccag tttatttttt
      481 gtgatcaaaa tcaaaaagac tactattttg tcatcagcta tttcattagt agtaacaatc
      541 aggttttctc ttctatattt tttagatatg cctgttatat tttttatttc taaagacaca
      601 aatccttttt aaatcttttc aaaataaagt ttcagaactg aactgtcagt ttaataaagc
      661 aaaaagacat ct
//
LOCUS       KCKM01001505             835 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23775apa ultra-conserved element locus
            uce-2534, sequence.
ACCESSION   KCKM01001505
VERSION     KCKM01001505.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 835)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 835)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..835
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23775apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>835
                     /note="ultra-conserved element locus uce-2534"
BASE COUNT          226 a          144 c          170 g          295 t
ORIGIN      
        1 tcgtcattat ttgtgttcct cctctatgtg gtccagctgt tttcttgtgg attatttctg
       61 tgaagagtta ttacaagtgc aatattgatc cttgaaactg gtttctccta tgtacatcgc
      121 aggtgttctg aaattttaga agcagcttta tttcagcttt aggaagaagg ttttaaaact
      181 ccttcctggt tgtttgtcag tggatttgtt gtagtttcct cacggtcttt agtggaggaa
      241 gtaagtgaca ctgatcagtg aaggtggaca gtaagattta taatgtattt gtgctagctg
      301 attgccaaca gaactggcct ttcccagcgg tgctgtacgc atacttggaa aatcaatagg
      361 gattagccta tgaccccctt cacatactta tactgtggtc tgcattgctt accaatattt
      421 catctgtttc acttaaatgc tgttacttac tcaataatgt gtggctgttc ttgcaagcta
      481 ctaattaatt tttaaaatgc agtatcactt gaaacagaga taaagcacaa cacctttagc
      541 atcagagtga gcggagggca gtggcttact tagtgaattt gcacttggta tctttaatta
      601 aaaatcctac tttgaaagat taaagttatg cattcagatt aaaaaaagta ctaaatcaag
      661 tactgggacc ttttcttggt ggttgccaac aaggaaaatt gccaggttta actagctaac
      721 tacagtaccg tgtgtgccgt ttgctggccc aatttgactt ttcaatatgt atgtttttac
      781 ctggaacatg cataaaagga acttactttt ggtgatgttt aataaatgtc tgttt
//
LOCUS       KCKM01001506             811 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23790apa ultra-conserved element locus
            uce-4875, sequence.
ACCESSION   KCKM01001506
VERSION     KCKM01001506.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 811)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 811)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..811
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23790apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>811
                     /note="ultra-conserved element locus uce-4875"
BASE COUNT          186 a          173 c          242 g          210 t
ORIGIN      
        1 gaaatctaag caaacagaag cacccatgaa ctctggtgct atttatgtgt aggaagatgt
       61 agcctcatgc atcaaatgtc ttgtggcaat ggcttcccga tccttgcaga ggaaagttag
      121 agggagtgga tgttgtttgc aaacttgttg tcttggcaag caagacgggc tgtgctggtt
      181 cagatgatgg gcttattttc tctatgtatc tgttcaccca atccatggag gcatttgctg
      241 gtggctgtcc tcctcccctg ctcttcctgc cctctggtgg gggccaaggt ggctgagagt
      301 ttctttgtgt ttattacctg ggagaaatga ccttcaggca gagcagttct tggggaaaaa
      361 gcttctccag ccgtgacaga tttgcctata aatctccagt attaatgccc aggttcccaa
      421 ggtctgtcat cctgcacgcc ggcaaggcac gtgagttgct caaaaacacc gtaccaactc
      481 atcagtcatt ttggaggcat ggcggaaagc tgtcgctgca ggcagggagg ttgaaggaag
      541 cctgtgagtg tgcttgtggg ggcttacacg ggacagatgg gagaacatcc tcagctggga
      601 agcgtgtatg agcatcctaa aacctgaaag ggctctcatg tgagagatgg agttgaaaga
      661 ggttttcatg gtgtcttcaa ctgcctgaag agatctgtgg tgaggaggtt caggccagga
      721 gccctggatg tctcatctcg tggggtcaag tccaggtgta gagcagacct gagccccaca
      781 gccaagtgta tatgggggag tgagtggttg c
//
LOCUS       KCKM01001507             551 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23805apa ultra-conserved element locus
            uce-1650, sequence.
ACCESSION   KCKM01001507
VERSION     KCKM01001507.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 551)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 551)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23805apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>551
                     /note="ultra-conserved element locus uce-1650"
BASE COUNT          131 a          143 c          129 g          148 t
ORIGIN      
        1 gagggagagg tgccaaggcg gggtgctttt ctcccgtcgg cttggagagg tgggccgggg
       61 ctttcagaag ggctgacaga tctgaagttt tggaggctga atgaaagaaa cactcagcta
      121 acaaaacagt gcgccacaga agaagtttca tctggtctgg ccaaatccct cctttctttc
      181 catcttttct ctcctaataa cagctgccct ctcattccct gttactccgc tgtgaagaac
      241 aaaacctccc tctgactatc tgtttttctt ttcttcccca gagtaggtct cattactggt
      301 gattagcaga tgattaaaac caattcagct tcccccagta gatattttct ccctgtttgt
      361 gactaacgcg tcagtcttca atgaacgtgc tcctaagctt attaacgggc tcagaggatt
      421 agctgccacc gagcgccgcc gctccgatat tgtgatgcag cgagtgacat ggaaccattt
      481 gctgagcaca gccagggccg ctgggaccaa atatctaaat cacaatttta ctttccgcgc
      541 agagcgagag t
//
LOCUS       KCKM01001508             996 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23821apa ultra-conserved element locus
            uce-1063, sequence.
ACCESSION   KCKM01001508
VERSION     KCKM01001508.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 996)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 996)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..996
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23821apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>996
                     /note="ultra-conserved element locus uce-1063"
BASE COUNT          278 a          197 c          222 g          299 t
ORIGIN      
        1 tgctatcctg cactccctca ttaagcgttc tttgagcacc ccgctgaagc agaagtaata
       61 atgccatttg tttgtagttt agtctttcca ctttctagag ggctctttgg aagaggtgtg
      121 gtggagcagt ttagggttgg caggacagca cccagcatag gtaccctcct tctttctaga
      181 aggaacatct ggtacccatc gggggccggt tagttggttc taggtgctac tcggcgactc
      241 tttggcatga gattcacttg atgcttaatt ttaccacaat ctgggcagag agtgcagcct
      301 gcgttgtcac acgtggaaga gttgaacatc gcttgtagtc caacactgtg cctgaccttg
      361 cagctcagta ttaatttgaa gtaccagaat taaaattttc tattcttttg cattgtcatg
      421 cctcacattg ataagcgcaa agaaatgtaa ataaaaaaga cctatttcac aaccctagct
      481 acaacctttt tgttttatga caaaagacag ttaattagca tactagcagt aagcagcctt
      541 cccaaactcg tgctaattat gtattctgtt gaccgtgact ccagtcataa ggtaattggc
      601 ttgcagcaac atgacatttc aaatcatctc ttgaaattac atcaaaaagc cagcctgttt
      661 tgttttgata ggggaacaat caatttgata agtggtaaca cagctcattg tttcacatta
      721 attagactaa ttgcagcatg ttagcctctg aaatagacag aacttggaga agacaaaggc
      781 tgtggccttt agcatgcagt gcatgtggtg gttccacttg cttgcacata ctgtaggcag
      841 aaaacagagt tgttaggatt cagccttgcg ggagactggg tgttaacagt ggtttgatgt
      901 gttatgctta atctactggc tttcaattat aagatccagc ttcaaaaaaa atgccagaga
      961 aaggaagaga gatgtgtgtt caatgttaat ggtgac
//
LOCUS       KCKM01001509            1020 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23835apa ultra-conserved element locus
            uce-5438, sequence.
ACCESSION   KCKM01001509
VERSION     KCKM01001509.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1020)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1020)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1020
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23835apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1020
                     /note="ultra-conserved element locus uce-5438"
BASE COUNT          293 a          234 c          201 g          292 t
ORIGIN      
        1 agcttttgcc taaaccctaa aaatttgatg cttttgggta cagctacatg gtaggatgtt
       61 ttcaaccacc tcaaaaaaat ttcaaaaggc ttctgtgacc gcaaaatttc agacaccatg
      121 cccacatcct tgtggcacca ggaccccaga tctgtcttag ctgatagact tccctcacgc
      181 agaagtgaca tggccactcc ctgcaaagca gacactagca ttgcattaaa ctgctgaagc
      241 acctcagtgg ctctcaagaa gcagactggc aaggactgct gcctgcccat ttgcccagga
      301 cagtaagcag cataggtccc cctgcagact tatctgcata aaggacaagt ggtcatccct
      361 ctctgcttca aaccttatag catggattac tcgttctcat cagacttcga aaagcctttg
      421 tcatccatct ggagcagctt tgtccttctc cacgtgccaa gcggtgccgt tgtttggtgc
      481 tgaacagctt ccatcagagc gcgcaatttc tcaccctgtc tgactccgct gatcattcct
      541 gtaattaagt ctcttttgat tctctttggc agcacaccat ctgcacaaga aggcacacct
      601 ggaaagcagt tttcctctgg ttttgctatc cttgattaaa ctctgtttta aagcagagaa
      661 ccttaatcaa aagaatcgcc tggctggagg tagctgtgcc tgtctcactt ttgtcaaaga
      721 ttccctctga aggctgcagg atttggattt gcataacaat ttcccagaaa gggtccatcg
      781 cagaggggca atattttcag aggattttgt tcttaagaaa aatatccaat ggaatgaatt
      841 aaatgggaat ataatggggt accatagacg tttaatagat ttcagtagta attactataa
      901 aattgtgcta aatttattag aaaaaatttt tgtagaatgc tcttataacc aagaatttca
      961 ttcctgaaca agttcaagaa aatgtgaaag gaaatattca ccttttaatg aagagtaagt
//
LOCUS       KCKM01001510            1033 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23851apa ultra-conserved element locus
            uce-7889, sequence.
ACCESSION   KCKM01001510
VERSION     KCKM01001510.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1033)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1033)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1033
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23851apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1033
                     /note="ultra-conserved element locus uce-7889"
BASE COUNT          289 a          247 c          188 g          309 t
ORIGIN      
        1 tacagtacaa aaaataaaat catgctgttg cgtagttcta tagcccacat gacccatgag
       61 cacagtaact tttgcttccc taggggcctg tcgcacaaag cagatttttg gccctaaatg
      121 ccctagaaca agctcagcta caagcttcag aatatgagaa aaaatacggt acacagcttc
      181 taggactcgc agtgccgtta ggcatttctg cccctcctcg cccctgcttt ctgatgtagc
      241 tttgtgtagt aatgacggca ctttgattag caagcctccg aacacaaaac aggagcacag
      301 tagtcagcaa gcagcctttg ctattttcat ttcagctatg cggacatgct gaaataatgt
      361 tcctggcaac atgatagcaa aacattagaa agactttatt aagcaaataa tttaattaca
      421 tccttttctc aggcagtttc tattgtatga cctctgacct tttatattgc tgtacctaaa
      481 ctcagcatgg gattcacact tcccattcct gtcacagaat ctctccatct tgtaccattt
      541 aatatagtgt gctccaggtg ttctgtggtg aatgaatagt tatattacta cctgtcagac
      601 acaatcacac tctattcatc atccgcggct ggctgcgtga agccctgctt ccagccagct
      661 ccctctctat ttccttgttc aaacgtctgc agtgctttca gcccatctgt caagcctgtc
      721 atttagaggg aaaacagtat cagcgcttta aatatatgga gctctctatt gaaacagtgc
      781 tgtgattgaa ctgtcagcat tctcagtatc acagacagta attcatgact ggtcagagct
      841 ccatttaggt tgctattact atgctgacct tgccgggtca cactgagagt tttttcccct
      901 tgcagttagg tctataaata gtgcaattaa cctttcaaga attacaaaat gttctcagtt
      961 cccctcctcc acaaattcag ttgctgtttg cagcatttat aataatcaaa aggagaaaaa
     1021 atcatcagga aag
//
LOCUS       KCKM01001511             427 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23867apa ultra-conserved element locus
            uce-2752, sequence.
ACCESSION   KCKM01001511
VERSION     KCKM01001511.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 427)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 427)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23867apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>427
                     /note="ultra-conserved element locus uce-2752"
BASE COUNT           87 a          114 c          127 g           99 t
ORIGIN      
        1 ctccttttcc cctcccttct cttgtattcc ttttctctca ttttccttcc tgtccctctc
       61 tccctgcaag actgatggat atgcagagta tgttaagaag caagcgatac tgtcaccgag
      121 ctgatggtgc tcagtgactc ctcgagctcc tggctggtct gtactgcagg agcttgacac
      181 cctgaccact gaggcataaa aaacagagaa ttggaagcct cagcctgaca ggcaccggag
      241 catcccccag agagggtcca cgatgtgtgt ctgcatgtga gtgtggggag gagggcagtg
      301 ggaatggtgg gggaggagag gatggaataa tgaaatgtca gcccgttccc acccgcagcc
      361 ctgctgcagc gctgacgagc ttctcgaagg tggtgcgatg tcagcgtggg acggggtccc
      421 caggggc
//
LOCUS       KCKM01001512             932 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23883apa ultra-conserved element locus
            uce-55, sequence.
ACCESSION   KCKM01001512
VERSION     KCKM01001512.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 932)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 932)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..932
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23883apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>932
                     /note="ultra-conserved element locus uce-55"
BASE COUNT          322 a          185 c          153 g          272 t
ORIGIN      
        1 atggtcacag aatacataaa cactgaagtg gaagttgcta ccagaagcat caacagttta
       61 acacaaataa gaaaacagat ttttatcaaa acccacaggc ttggaatggg tagttcccat
      121 tagcatgagt gacagtggtg tttctgcaaa tcccatgtat gctgatggaa tatggaccct
      181 gaaatctcca tgaccttgat gtgcaatatt tatgtctata cctttagcct cttgcacata
      241 atgagatgca atcttttagc tttatgcact tcaccaggca ttcaattaga aaaaccaaat
      301 ttggggggcg aagaatgcta agctatttag acagaaggta gtgaatcaaa aattgcaaaa
      361 cttcagcttt caaaaatagc ctaagtgacc tcttacaata ctctgaccac tccatcacaa
      421 gcaggaggca acccctgtga agagcgaatt ctggcaaagt tctctcttca cagatgatgc
      481 acagcttaag ctataatgag tttttgggtt acaaatgctg aacgcattaa tattccttga
      541 tgataattat cacagtataa gcacctttcc caatgtgagt agcataaagc aactgaagca
      601 gcatttttac tacatttgaa acaagctgga aaatgggatt ttctactctc gtaacccgag
      661 gtcaacatac accaagctat gcatattaaa tacatctacc ctatataatg atatagacct
      721 ttccatatat tcatgcacat gcttgcaatt aacaccctaa tttttgaata cttaaacaaa
      781 tatgccatac atatgaacgt gatttcccaa tcaaaataaa tccaacattt tacataggaa
      841 gcaaataacc tgtaagcagg ctatactgct atttctttga aagtgagtta ctttttgaca
      901 ttttttttta ttagctgctg atacaaaaaa aa
//
LOCUS       KCKM01001513             964 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23898apa ultra-conserved element locus
            uce-462, sequence.
ACCESSION   KCKM01001513
VERSION     KCKM01001513.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 964)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 964)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..964
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23898apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>964
                     /note="ultra-conserved element locus uce-462"
BASE COUNT          278 a          188 c          182 g          316 t
ORIGIN      
        1 caaccccaaa ccccaaaacc tgctgtgttc attgggttgt tatttgtttt ccaggagtgt
       61 tctcaaatga gctctgttac tttcaagtct tatttttcat tctggccacc agcgtttatc
      121 agatcacttg aaagttttga gtttttcagt gcaacgatac acgacttaaa gctatggctt
      181 caccttaata agaatagaac tggcttatgt ggcaattcct ttggttttta gaaagtatgt
      241 gttggattaa atcagaaatc cttttcgacc aaaaataatg tcaggtacag tattcccaac
      301 tttcttgaaa tgtaatactg ttcctttctc ttttgcaact gtgttcatta ataagtttaa
      361 ataaatttgc attaggttaa actgtgtgtc cggatacaca tacattgtat atgtgatttg
      421 tggtgaacaa atattttctg gctgcttaat ttctgactac aaagttgtga taatattaga
      481 tttgggcttg ctgtgcataa agtatgtcaa acttcagcta cagaccaggg ggtgaagttg
      541 gtcaatttaa ttccccaaga tctaaagaag gtcggtatca tttcatatag ccctggcaga
      601 gcagatcatt accagacaca aatctgttcg ttacatgccg agggtttata gcaaaataaa
      661 tagactgtca tcataagttc agaaaattgt gtgttcgacc cacgataatg tgtaaagggc
      721 gtttaataga gttcagcatt tattcgttat ctatatgcgg acagagacgg cggtagcgtt
      781 atcagctttt taaaaaaaat tcggtagttt tctccgtcac gtgacatgcc tcacagacac
      841 acacacacac attcacacac cccatctcgc tctctgcggc gcagttttga ttttagtcac
      901 agcagaaggc ttagccacaa gagattccac tggttcaaac cagcgtaaac cagatttatt
      961 tttt
//
LOCUS       KCKM01001514             903 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23913apa ultra-conserved element locus
            uce-2210, sequence.
ACCESSION   KCKM01001514
VERSION     KCKM01001514.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 903)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 903)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..903
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23913apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>903
                     /note="ultra-conserved element locus uce-2210"
BASE COUNT          264 a          155 c          175 g          309 t
ORIGIN      
        1 aaagggatgc taaaaatcca gctgctggct ctctcactga gctctcaggg aagttcatat
       61 cccagcctct ggtttttttc ctgtttattt tgttttgaat gctagtgtag gagatagcag
      121 taatagtagt aggtttgagg gtcttataaa tagaaagggt aggagaagca gttatcatca
      181 agcttttgct ttgaaatgta aacttagcaa agacttccct gatgaagtat acatatggaa
      241 ctacaaaatg ccacttttta tccatttgtt ttcctgacca taaccacgtt ttcacactgt
      301 cagcattttc attagaagct ctttttgtca gaggtttata acgagaatgt aaagatttgc
      361 tatgggctaa atctcaatcc aagagcaaat gtttatacca attctgaaaa caatcagctt
      421 gcccatttgt agttatgcat gtgttcatca tctgttactg cttgtccaat gctctgcaac
      481 ttctggaagg aaaaagagac atctggagga aaaaaacaaa tgctatcctg cagatagtat
      541 actgtatgtt ctcctgagtt attgaataag gtactatata aacgcaggtt tttcagctga
      601 tacaattctt tttttgctta agcatgtcaa atgtactgca gagaatattt taacggatgg
      661 tttagactct tctcttcttg tgtgttactt acatggaagt tgcattaaaa attcagtgga
      721 aattattcac ctaatgaact gaaccacttt tatgatgcca ggcacgatga attatttgaa
      781 aatgttttag cttatcttca ggacctgagg gttaacaggg ttttcctttc tgtcacttcc
      841 actgtgtatc agtcattaag tcccacaata ttctgtggag gagttaaatt taagggatga
      901 ttt
//
LOCUS       KCKM01001515             834 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23929apa ultra-conserved element locus
            uce-2366, sequence.
ACCESSION   KCKM01001515
VERSION     KCKM01001515.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 834)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 834)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..834
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23929apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>834
                     /note="ultra-conserved element locus uce-2366"
BASE COUNT          248 a          157 c          157 g          272 t
ORIGIN      
        1 ttctgcagtg caatgaggtc caggttttct acttccatat tcccactgag caagtatgtt
       61 atctttatgg gttacctgaa ctaatgtaca gaaacgagaa tcctaatatg acccttgagg
      121 ccagatctcc cagatagcaa cagaagaact agttctatta cttagctttt attgtgatct
      181 caacacaccc caggagctaa atatctggag atgttctttt gcaattccaa caatcctgaa
      241 gcaagcatcg tgtacaacaa cgctttataa aaaggcctta agattaactt acacacaaca
      301 gcattcctca taatgctata tgaacatgga aacatgtctt atttgtatga tgtttacaaa
      361 tacaacaaca tgattaactg taaacttgtc tctcatgtat aagagtgtgc acctcctacc
      421 atcatatcct ttgggggata tatccctgga ttgcaccttg ggagctatgg ctctcttgcc
      481 ataggcatgg ttgtcataac tgttatattc aaacgtagtc ttagagtatt tctctagttc
      541 cttggccaag ttggagcggg gtgtggtggt ggggacattg tttctgtagc catactgagg
      601 gatctccaat tgcttaacaa agcacatggg cctagaaatt aaagatatgt aaagtttgtt
      661 agatgcagtt cagtttactg tgtctgtgca taatttatag ttcagattag aaaatcttag
      721 ttatttcttg tagtcaagag acagcaatat attattgcat ttgcttagtt tggttatttt
      781 cagcagacaa acaatatata ttttcttgaa caaagcctag gcaaaattaa ttct
//
LOCUS       KCKM01001516             886 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23944apa ultra-conserved element locus
            uce-6248, sequence.
ACCESSION   KCKM01001516
VERSION     KCKM01001516.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 886)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 886)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..886
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23944apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>886
                     /note="ultra-conserved element locus uce-6248"
BASE COUNT          268 a          174 c          148 g          296 t
ORIGIN      
        1 aactttgtgg tgctatcagt ctgaaatgca acctattcct tctaaacaaa gctaaactgt
       61 gtgctttctt tgtctttgaa ctagaaaaca tagcttaata tacacaactg acaagacttt
      121 caccccctca gatacttcat gtgcaaattc aattcattta tttctgtaaa ccagatctta
      181 ctgtatgaat aaaagataat ggttttaagg ccacgcagct aattgcaatg taaaatactc
      241 tgcacgtttg ttacaaaaga ctgctttgaa atggctcaaa tatctcagaa aattgcctaa
      301 aacttcttca cttcattagc aaatgtcgta tgtacagatc gtcagaggac ttaatggtga
      361 tcgtgctaat agacagctgc cagcacgctg cggtgagcga ggccatttgt aattctcatt
      421 aacagttcta ccatttttgg ttgtatgaaa agtgataaca caccgatcta agagtcatta
      481 agaacttttt cttactcctt taggattaat ttgcactgac ccagaattct ctatttgctt
      541 aacacaagca gtgggccact ttgatgttat ctgcttctat aaacaatagt gtacagttct
      601 ctcctgggct aaaacagctc ttattctact gagaattagc tgtattaatc attctgaagt
      661 ccaagagtgc atgatcataa attgtgtgca gggacctcac ttagcaactc ccaagactct
      721 catttatcaa catttttttt ccccttcctg gatatttagt atgtagggag taatttattt
      781 ctgagccggt gctttgtgat gcctttcatg ttgaagtaaa gttggaaaaa tttctgcaac
      841 aaacataatt tttcttactt ccttagtgta aaaacaaaaa ttatgg
//
LOCUS       KCKM01001517            1056 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23958apa ultra-conserved element locus
            uce-5606, sequence.
ACCESSION   KCKM01001517
VERSION     KCKM01001517.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1056)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1056)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1056
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23958apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1056
                     /note="ultra-conserved element locus uce-5606"
BASE COUNT          261 a          191 c          234 g          370 t
ORIGIN      
        1 gcagttattc cccaagaaga agcagaggat ctccacgcta ctctccccgc cacagcagat
       61 cccgatctcg tacataaacg atcactagct ctgatctttt tgtagaaccc catgttgtac
      121 acagttttcc tttacttagt acagtctttc atttattttg ttttattcaa attggctgaa
      181 gtgttgaatt gcgttcttgt gtaaaatccc tagtgagtat ttgctcctta acatcaacat
      241 tccccctcat gtctttggga aattgtattt taattgatgt cagtcaggat tgtttcgatt
      301 tagttctagt tcaataccaa cactcttgga actgtggtat cgctgtgtaa atgtctcagt
      361 gttcagctgt ggtttatacg agctggggat gttgggatgt ttgtggctaa cttgtctctt
      421 ctgggggatc ttatatttta tcttgccttt tcgtgtgtct ttctgtagac atatctgaag
      481 agatggatta agaatgcttt ggattaaagg attgtggagc acatgtcaat cattttagga
      541 ttgtcaaaag gaggattgag gaggatcaga tcaataatgg aggcaatggt atgactccaa
      601 gtgctattgt cacagatgaa cttggcagta ttgaccttat actgagggac aggttaattg
      661 agtacgtgga cccacgtgtc acttcaggca tgttgtagtt actgcgcgct gcgattgctc
      721 ttttctttaa aacttctctt gggggagcaa ttgtggctaa atactgtctt ttgtaattct
      781 ctattccatt cgagtttttt aaaggagtaa tctgggctgg gggtgggagc attggtttac
      841 ttttcatcac gcagcatttg gttacgagcg ttaatgtcat gtcgtattcg tacacttgcg
      901 gtagatcaag ggtatcttta aatcagagta taatatcaat actgctaaaa tctgcatgtc
      961 ctctgtgtga ctgatacagc gttgctattt catttttttt aagtaccaga atgagagcaa
     1021 aaaaaaccta gttgggcata atttcttaag tcctgc
//
LOCUS       KCKM01001518             960 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23973apa ultra-conserved element locus
            uce-3862, sequence.
ACCESSION   KCKM01001518
VERSION     KCKM01001518.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 960)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 960)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..960
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23973apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>960
                     /note="ultra-conserved element locus uce-3862"
BASE COUNT          331 a          183 c          165 g          281 t
ORIGIN      
        1 aggtatgttt aatgagctgc tacaaataca attggcgaaa agaggctcag aaattatgta
       61 ctaaaagctg cattgtgctt agaatcacaa ctgcaaaagt ctcattttaa agagcccagt
      121 caaagtcaag ccccataaaa caaatcaagc ctcgtataag ctttgcaacc ttgtgtactg
      181 acaaacacat taaaacaaga gaatccctcc ttaaaggagc ttttttttcc cccagtgcaa
      241 ctcaacttcc aatttgaaaa taaccatttt ggctattttt acagacagaa tgaaatatct
      301 aaagtgtctc taaattaaca agtaccgctc gccatagtca gcattgcctt cagaagctcc
      361 taaaaacttc agaaaatgat cttaaaacag gaagcttagt gagctcataa aactgttgtt
      421 ggagccagga acacatagca tatttaatct gcaaactgtg agagtctaca atgatttcag
      481 caagatctga ggcatgccct caaggtttgc tgggatctgg gattagggag ttgataagaa
      541 ccctctactg cccatggaca tgtttttctt ctgcagttaa acacaaatgc atagagacgt
      601 ttgactgctg cttggcgtta ctgctcaagt tatataaaag ctttgcagct ccttttgctg
      661 tcaatatatc aaagtttaaa aaaaatcatc aaagtgtgaa atttcattta aagtctttgc
      721 cagtctacag ctctatttca caggcctatc aaataaaagt aaagatgaaa aatgcactga
      781 gagaacttga aaagtttgca gcagcaccca tgccctattt ttgtttattg tgtctcattt
      841 tatttgattt taaagtataa caaatcaatt ctcttataaa aatgacaaag tctacaggga
      901 ggaggtctat aaaatatatg gttaaaagac aacttgaaat cattattaca gctgaacctt
//
LOCUS       KCKM01001519             769 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 23988apa ultra-conserved element locus
            uce-3655, sequence.
ACCESSION   KCKM01001519
VERSION     KCKM01001519.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 769)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 769)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..769
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23988apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>769
                     /note="ultra-conserved element locus uce-3655"
BASE COUNT          215 a          146 c          191 g          217 t
ORIGIN      
        1 aacacttctg gacagcagct gtggttggaa aatatataga atagcgaagc ctgtgaagtg
       61 tgcaagaaaa acagcgctgg ttaaacatgt ctgaatattg ggaatcctag ggcattcatg
      121 tgcttcagtt cggagaaggg agggatgctg catttcacaa cagaaggtct taaaaataaa
      181 ataaaataaa aataattgct ttggggaccc gagttaaaat gcaggtgttt tgaggggaac
      241 ataaacattt tttcctaaat gaggcgttga gggctgggag aagggcagta aaattagtgg
      301 aattactgcc tgattttaac cagatgattg ctgcagttgg acaccagtgc ggtttcatta
      361 gggactctaa tttacaagcc attcgttgca ttccagggga acgcagcaac tcccccctgg
      421 tcccctggct cctaaagaat gccagcactg agctttaggg cggtaatgcc tgactacacg
      481 cttgctggct ttggggcttt ttttgctatc gttgctattg gtttttttta aggccagctt
      541 ggcccgtggc actgcgacca agctttttgg gaagggataa gaagagtggc actgccttaa
      601 cccacgtggg tagtcccagg aatctgtgta aatctccatt ggcatggaga acatatggtc
      661 cttctactaa gagcagtcct gatttataca taatgtgcaa tcagatatat tacatcattt
      721 cagtgttaga tactagtata ttccagatat aaaatgaccc ttttcctgg
//
LOCUS       KCKM01001520             431 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24003apa ultra-conserved element locus
            uce-7988, sequence.
ACCESSION   KCKM01001520
VERSION     KCKM01001520.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 431)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 431)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24003apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>431
                     /note="ultra-conserved element locus uce-7988"
BASE COUNT          140 a           77 c           76 g          138 t
ORIGIN      
        1 ttctttggaa gaactttcaa aatactacac acacaatgaa ctttcaattc ttaaatttta
       61 ggcgcaataa agataaaaag cagtagcatt attagaattc tcttgtgggc agcaccatgt
      121 tctgttcatc aatctgctat gcccattttc ttagccctca ctgggaaatt aaataatcct
      181 gactgacaac tgacacatta attgcctttg agggagaaca cctttaaaaa gcagtaattt
      241 aaagtcttct gctttggtgg aagaaccaat ttgcagcatc atcagtcagg gttttgacat
      301 gtaactttgc acttgccatt ttgttaataa agaatcacac tcgaatcctg agagagtgtt
      361 tccctaaaga gaaacttaga tgtctttgtg aaattaagat gactttgata gggacatgta
      421 atgaatgttt a
//
LOCUS       KCKM01001521            1046 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24018apa ultra-conserved element locus
            uce-3991, sequence.
ACCESSION   KCKM01001521
VERSION     KCKM01001521.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1046)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1046)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1046
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24018apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1046
                     /note="ultra-conserved element locus uce-3991"
BASE COUNT          363 a          199 c          179 g          305 t
ORIGIN      
        1 aatagttaaa gaggcatcct ataatatatt gaattcgtac tcttaacaaa caataaataa
       61 cttgcactta tgccaaatca gttgagtgaa gactgaagaa caaagagtga agtgcaacat
      121 caaatttata ttccataaaa tgattgaaat gctaagtact atacctttgc gcaacaaagg
      181 ttttagatgg gggcaggtgg ggagaaacac attaaaacag tacacaggct gttactccat
      241 atgtgtttgc atgactataa taaatgcttt taatctatga aacatctggg actaaaaatc
      301 caatttgtac gggttttttt tttaaagata aaacagtttt aaagtgtata gcatagcttc
      361 tacaatataa atctgcacaa aactaacagc acaggtctat tttttctagg agtataaaat
      421 atgcagaatc ctaccaggcc atattgccat gggctgtgtt gtcaaggtga cagagtagct
      481 ccagggtttg agtgttgctt gatgaatcat caggggattc atgactgcct gattccaatt
      541 ccttcggcat cctccaaaca gcagcacatg tcatgacttt actgtctgaa gctaagcaac
      601 agagaataat gtcaacagat cattgtatgg gagacgtatt ttgtatacag tgcatcaaca
      661 tttacacaaa tctataagca gtgcacatct gccatttaaa atatttaaaa atattatacc
      721 aagatgaatt caaagaatgc agaatgtgga tacagacaca gacctcaagt cagcagtcaa
      781 gttgcctcaa aattcataat taggacacat ttaatccatt tctcccagtt taaaggcaaa
      841 atttggtgct catgagaaca caaatctttg gaggccacgc ttcccaagct tcattcccca
      901 tattgatgtt aacaaaatgg acccacaagt tacattgctc gattccttaa caataaggac
      961 ttagacatca ttatagcatt ttccttttaa gagccatctt cagttgaatc tacagcatca
     1021 tgtcataccc tttactatca acaaac
//
LOCUS       KCKM01001522             671 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24034apa ultra-conserved element locus
            uce-4389, sequence.
ACCESSION   KCKM01001522
VERSION     KCKM01001522.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 671)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 671)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..671
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24034apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>671
                     /note="ultra-conserved element locus uce-4389"
BASE COUNT          208 a          156 c          117 g          190 t
ORIGIN      
        1 atacttatat tccactcagt tggagatcag gacatctaaa gcaaacttga ggcgaaaacc
       61 tgctcatcca catttttatg tattattctt gtatcattct tccaagtgaa taaactctgg
      121 gacaatagcc tgctctgtgc agatatagat tttcagcttt aacaacaatc cagattttta
      181 tctccatctc tttctttaac gctgctgaaa ttctcaacca caagcacaag tcagccaggc
      241 aatcccatga caaactccac taaggacttc acagttaaca aaacaatgaa tgaaacatca
      301 ttctggcaca cagaacagct ttctgctgtc ttctgccgct tttgcttttt tttccccaag
      361 tggaaaagca acttcaaaaa caaggtgctg tcattttagc aaaggagaat taggactgtg
      421 aaaggatgaa gtgtccttgc acagagagac tgcagctaaa attgtatcaa tattcctgtt
      481 ataaactgat aaacatagag ctcagtgagg tcaagttgta catgcttgag ctgacatgcc
      541 aatctgccag cagtcatatg gttctcatat ggcgacacgc cacagatgcc aggaaaatgt
      601 gagaagtttc tggctcattt catttcactc tcctgaatgc catgtttgcc tgaacacaca
      661 cacacacaca c
//
LOCUS       KCKM01001523            1139 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24049apa ultra-conserved element locus
            uce-3159, sequence.
ACCESSION   KCKM01001523
VERSION     KCKM01001523.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1139)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1139)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1139
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24049apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1139
                     /note="ultra-conserved element locus uce-3159"
BASE COUNT          331 a          231 c          219 g          358 t
ORIGIN      
        1 tattatcaac tcagctaaac caattcaatt cttaaacctg ctctttgaaa acgggtatgt
       61 ttaattgtag tgccttgctg cctacttata tcaggtgatt aaaaaagact acctgccatg
      121 ctgctttaag tgtaacctct ggaaaaaatt ccagcggtat gtatgttcac accagtcctg
      181 gttttccaag tctttcccag tgaccatggg taaagaaatc attacagcct tagacttcca
      241 gtgagagcta cgcgcttcct gaagcatgcc ttagctgaac accatgaaag ggacgatgat
      301 gaaatatcag ctatcatgta gctatctata aatgttagat ttctacaaag tgattccact
      361 gaattgtaat taagggtttg aaagtcgaat gattttaagt gctagtttta attaccgctt
      421 ggtgaacttt agtgtgttag aattgtcaca actttccttt agaattagtg tcaagccagg
      481 caatacagtg ggaaattatt aactcatact ttggttcggc aattatctgc attacaaggt
      541 ttatgcaatt agctgtttaa gatgtcatta tattttgcca tctggtacac aggagtttat
      601 gcatatgaac aggcacgtgt tgaagtgatt ttcactatat gactcttgat ctcaacccaa
      661 atcatcacta taatgagtgg aagacacagt gtacagtaca ttagtggcag gtgcatacta
      721 tcaacttcat tttaatagaa gactttcatg tttccatttt taaagtattc tgcacaagtg
      781 ctgaaaaatt aattgctcgt ttgcaattta gcaaaaactg aggacatgct attgctaaat
      841 gctaaggaac atcagttttc agaaaagtga ccactaattt aagtcctttc catctgtaac
      901 ttcaggccag tttctgctcc agacaataag aaagtctgac tgaagttcag cataaaacgg
      961 tctctcattt catggtgaac acgctgagtt acctttgata gtctcacagc actgaaagcg
     1021 caaggatgcc ttaaaactca cctgcactct ggtccctgag cgacaaccta caggtcaccg
     1081 gtgtctgcca gtgcgcatgg tgctgtcacc tgcgtccttg gtttccctta gtctgtctg
//
LOCUS       KCKM01001524             672 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24065apa ultra-conserved element locus
            uce-2563, sequence.
ACCESSION   KCKM01001524
VERSION     KCKM01001524.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 672)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 672)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24065apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>672
                     /note="ultra-conserved element locus uce-2563"
BASE COUNT          217 a          117 c          138 g          200 t
ORIGIN      
        1 gtctttttaa ctaataccat gtcatctctt taatcatgct gattctgaat aattcaccca
       61 ctgtggaagt tgcagggcaa ggatctatag ctctatctct cactgggggg agtttattat
      121 tactgagtct gacagcagaa agccctggca ggttaattgc tgcagcaaga ctagctggga
      181 gttcgctgtt gatatatagt gactaaaggg aatgagggag attgactatg cctgttacag
      241 cacaaatatc ttcatgtgcc tcaggttcct cagaaagata tgagaaataa atgttcgctg
      301 ttcattttct gtctgcacaa tacaaatagc cttaggctga acatggcaac cacagcatat
      361 ggaatatata taaaaaagag gaaatttgca aattaacatt attacaaaca ttcctgcctg
      421 aaagtgctga aatcaatttc aatatagttt gcattttaat gaagtgccaa agagataaat
      481 cagttgtgtt tgaggaacgc ttggctggca acagtgtttt ctgatcataa catgttaact
      541 gatatcagat taagaaaaaa cagcattaat tgaaggcatg ggaaatgtta ctgctagtta
      601 atgaagtaaa ctcttgttgg ttatatagag ccattaaccg agctctgata accatttccc
      661 aggaacagct ac
//
LOCUS       KCKM01001525             743 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24081apa ultra-conserved element locus
            uce-4160, sequence.
ACCESSION   KCKM01001525
VERSION     KCKM01001525.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 743)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 743)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..743
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24081apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>743
                     /note="ultra-conserved element locus uce-4160"
BASE COUNT          238 a          153 c          135 g          217 t
ORIGIN      
        1 tcaaataaat aagagccatg gaaggaaaaa actgcagcta caaagtagtt ctaacccatt
       61 aaatgcagat ggcccacagg gggtttaatc ataagagaga gaacacacat catgctgaaa
      121 tatagagctg ttttctatca cttgttacca tttgaatgtc tgtcccagga aagtgaattc
      181 aatatatctt cctggccatc agttgccctc tgaatactcc ttctctctct gatgtagcta
      241 gatttccctt tagaacatac agagatgaat gagctcttac cacacgtaga agtgaaagaa
      301 aacatttctt tctgcaccag aacagatgag attcatcatt aagagaatgg atttgacctt
      361 gtcaagtgga ccaaagcaat ttataaacaa actcctacag gggaggctac ttttggccaa
      421 gtactatatt agcagtgttt tacttatgcc cactgctacc ttacaataac ttcacaaaca
      481 ggctgacttc ctgaaatata gggtgctgag agatatcaca gatgtaccta gaaacactgg
      541 gatagcataa ggttacttcc ctccctagag gctgtagaga tatatgtcca cccactttgc
      601 tatcttgttc ttggtaaaag tttccaatca ctacccaaat tagaactcca tgtgatgttt
      661 agcatatgta tcaaacaaca tgtttatgct tcagtttgcc attattatat tgttgtttgt
      721 gtaagcaaca cccatatgga aga
//
LOCUS       KCKM01001526             868 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24096apa ultra-conserved element locus
            uce-2923, sequence.
ACCESSION   KCKM01001526
VERSION     KCKM01001526.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 868)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 868)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..868
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24096apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>868
                     /note="ultra-conserved element locus uce-2923"
BASE COUNT          217 a          179 c          243 g          229 t
ORIGIN      
        1 aaatcacaaa gtaagtgatt cgatctacag caccagaggt tgaaaacgcg aggatagttc
       61 tgtagagacg tttgatttcg tggtgtctac ctttagagct gctggcatgg atgaaacttg
      121 gtttgtttgg tgggagtggg ggctggcttt ttttggcagt actgttggca ttgactgaag
      181 atgactggaa tgagttggaa agaaagagac catctgaaac tgggcgaggc tggcgggagg
      241 gctgctgtgg cttaagggtg gcaggaggaa agtcaccata agattttctt gtgctggagt
      301 acttatcctg acctgctaga ttggaatcct cctcctcatc atcatcatca ttgtatgcaa
      361 caaacttggc agtataaatc gtgtcagggg agaggacctg tgttttgagg taagaggtgt
      421 ttcgctgagg tgggggagga ggagcgttag atgaaggggt tggggatggg agttcatatt
      481 cccgtggaag cggaggtctg tacagaccag gctcgtcagg ttccagcaat cttcgttctg
      541 cttcatcgtg ctgcctgcgc ctttcagcct ctaagcgatt gtaatactcc tcttcctgtc
      601 gcctctgcaa gcccagagga aacagaaaca ccgtggtcag aaagacattt caacctaagg
      661 gagatttatg cttgccatca cccagctaca agcatctggt ctccttttct ggcaacaggg
      721 catggcctct aaatggacca tacaaagaat atttactgct atgaaaaaag cggcagttat
      781 cctgtaacac agcaccgctg ttacgtccag atttaccact gcctgtggta actaaaagca
      841 accgcctgtg tgaactaagg gtgattcc
//
LOCUS       KCKM01001527             662 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24112apa ultra-conserved element locus
            uce-4562, sequence.
ACCESSION   KCKM01001527
VERSION     KCKM01001527.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 662)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 662)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..662
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24112apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>662
                     /note="ultra-conserved element locus uce-4562"
BASE COUNT          154 a          171 c          158 g          179 t
ORIGIN      
        1 aagggttaaa gatgggtggt gtctgtcccc ccaagtcagc aaaggtaatt acagccccat
       61 ctatttagct gtgagagaat ttgccgttga gcagataggg ccgagcttcg agcccttcag
      121 ccgcccaaca atatcgcatt accccgactg cataaagagc gcgagcgatt tccgctggcg
      181 gctccataat ggaggtatct ctttacaaag cccccacttc agggcagctg aatgcctccg
      241 aaatcccgca gccctaatcc ctttaagcaa caaagatctg tttctttgct tagcatgaag
      301 tagacctcag aggccggtgt gtgccttggc ctgtaggcca aaagcctcct gtttacaatt
      361 tccctattcc tgtttttaat gttgttctga gagcagccac aaagggccgg gtttgtccag
      421 cgggaacaag ggagctatta gagagggatg gaggaaggaa ggaagggaga tccgaaagga
      481 gcagcccggg agggattagc atacacagct gttccctcag ggacaggagc tttatgcttt
      541 ttataatttc cctctcattt acatttttta atatctggtt tccttcttgc cagcatcccc
      601 cccccctccc cctatgtctt caggaccatc tgcccatttt attggatttt tttcttggtt
      661 ct
//
LOCUS       KCKM01001528            1072 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24127apa ultra-conserved element locus
            uce-2598, sequence.
ACCESSION   KCKM01001528
VERSION     KCKM01001528.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1072)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1072)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1072
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24127apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1072
                     /note="ultra-conserved element locus uce-2598"
BASE COUNT          358 a          225 c          192 g          297 t
ORIGIN      
        1 agctgtagct ccatgccagc atccccacag cctcaccctt tccaggacat actgctcaca
       61 gcacgcatga aacacagata aaagaggtgc tttaaggctg aacttactta tgaacactat
      121 gataatcaag ctaaatttat caagatcaat atttggattg gcaaaagtat cacagaacgt
      181 tgtgtagatg atcatcagga gcacgcagct gctaatagcc ccaaatggag gcttcttcct
      241 ttcaagccag tccttgatgt atcttcggac aatctgaaac acagaaacca acaggttgcc
      301 tcttttcaaa gatgcaggga gccaagttgg gcgtcacaaa gtgaatctga cagcggaaag
      361 acacaaagag aagagagtaa tttggatgac ggccacagtg gatttcaaag cttccctgcc
      421 acacaactct tcttctgggg aatttaacat ttgtagtgca acttccactg ggcgtccata
      481 atgagagtat attttcaagt acattcaaat ccatccttaa tcatgccaaa tgttctttgc
      541 tagctgtcac tgagacatgc ccattaagcc tccccaaagt ttatctcctc tgctgatact
      601 aatggatgta tgtaattatc acagtcccct ttgcatcaac agacaattcc aagtgcaact
      661 ttgggaatct taaaaatctg acatcttcag gaatttcatg acagtagata atcgaaagtg
      721 atccatggaa cattttaata tttaaatagc tagcgatgca ccagaagttt ttaattaaat
      781 tataactcaa gcttgaaaag caaaagtgca tgtgttgtgg gagtttaaat aattcaaact
      841 ctgaatatct agagtttttg taaatccaaa gacaaatgcc atttgcacgc ttttagaata
      901 ccagaattaa cacatgaaaa caagggaacc tactgtactt agcagaactt ttgcactttc
      961 aggaaacaga atctgaagtt gtttttcaag aatattttag aaacaactat caattttaaa
     1021 gtaacttcaa ctttcaaatt atgccaaatg ctacaggact aagcctcagc ag
//
LOCUS       KCKM01001529             871 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24143apa ultra-conserved element locus
            uce-6256, sequence.
ACCESSION   KCKM01001529
VERSION     KCKM01001529.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 871)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 871)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..871
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24143apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>871
                     /note="ultra-conserved element locus uce-6256"
BASE COUNT          236 a          231 c          200 g          204 t
ORIGIN      
        1 gagggtaatt caaagccaag tacttttaaa cagcacttaa caagtcccta gagcccactc
       61 aacagtgggc caccccagaa gtgccatctt ctgcccctca acagcttgaa aaagtagtaa
      121 ttgcaactct atttgcattt ttcttctcaa cttgtccatg ttcatcattc ggcaacgcag
      181 aaaagaaata aatagagaag caagcagcaa agaaaaggga accctcccca aacgtgtggg
      241 taacaggaga agccggcgcc ccagtccctg cgctcgcacc ttcgccaccg cttgtttttt
      301 acatttcgct cctaattatg ttgcatctat tgccatacac ttaattagct gcattaatgt
      361 gatttctttt cacatagtca agcaattaag agctatgatt gagtttcatt caattagcct
      421 caacaaacat gctaattgat gtcccagatg caaatgaggt gcaatgagag aaacctgcta
      481 gcaattgaga gttgtggcgg ggagacccac agctctcagc ttgctgacag cagcacagct
      541 taacgcggct cccaccttct gtggagctgc cttcgcaggc ggcgggggag acaagccatt
      601 agtgcctcag ttgtcccaaa gagatcccta caggaactac gggcgagcgc tgaatcaaat
      661 cgacgttgtc tccaactctc gtggcaatgg ccggtaagag tcggagaaga gcgtcgcgtt
      721 ctcctgcagc cggggaggca ccgcagaccc ctcgagcgcc acgagttctt cggctgagga
      781 ctataaaagg tctccatctc atctccgagc tcgtgaaaca cgacgcaggt aatggcctgc
      841 agttatcagt aactggcaac ttcatcttag t
//
LOCUS       KCKM01001530            1019 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24159apa ultra-conserved element locus
            uce-3166, sequence.
ACCESSION   KCKM01001530
VERSION     KCKM01001530.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1019)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1019)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1019
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24159apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1019
                     /note="ultra-conserved element locus uce-3166"
BASE COUNT          252 a          223 c          225 g          319 t
ORIGIN      
        1 tggaattagt tttagcctga aattaggtct cagttaaaag ggtgtatgta gcaggcaccc
       61 tttcatctct ttcctttctg ctgtgtgcac agcactgctc tgctcatgca aactagcaag
      121 agatctgtca aatatcaaat aagaattttg ttgctgaagc tcttggaaaa ttgacaggta
      181 gcatgcaagc aaacattaaa tcaataacag caaatttccc ctgggaaact tgtagtgttt
      241 tctcatcaaa atctttaaat ccttaaagaa accataaaag gtttacacac ctcgcgctgg
      301 ttaatctggt tacctctgca ttgctcagcg cgggctgatc accgcgcagc gagtgtaata
      361 cccagtgctg atcaccgagc agcgagtgca atacccagtg cccccgctct gatgtattgt
      421 agctttgtta gtcactgtgg ctccttggta aattcatttg gagtcctccg gggttttaaa
      481 tctctcattt ggccaacaac gaggtctgaa aagattgcag ttcatttcga cccacagtgg
      541 atggaaggct catttactgg ctgcaggcaa ctcaatcagg ctggccgctg atgagtgagt
      601 gacttgttca gactgctagt caatatgtgt ctgctgtgat agaatgtcag catctgctgc
      661 tgctcctgtc tcccaccgct ctggcttttt tcatttggtc tgatcaatgt tattaaaaac
      721 acctaggagt tccttaactg ctctgccact tgaggctttt ctttctttct tttttttaaa
      781 cacaactccg tattatctgc aaacatgtgc agatgatgta catggattga tttttttaca
      841 cgaatgtgca gtgcgtggga cagtgcgtgt gctcatgcat gctcaggcgg gtgactttta
      901 gagaggagat ggctttacaa ctacatcacc ctggtttgat tgtcgtgtgt gcgttgctct
      961 gaagtagctc agaccagggc cttttgcaaa catctagtaa ttattatttg tgaacaaat
//
LOCUS       KCKM01001531             823 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24175apa ultra-conserved element locus
            uce-2353, sequence.
ACCESSION   KCKM01001531
VERSION     KCKM01001531.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 823)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 823)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..823
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24175apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>823
                     /note="ultra-conserved element locus uce-2353"
BASE COUNT          245 a          198 c          142 g          238 t
ORIGIN      
        1 cccaatcact tacttgtgga tatgtctgct tcggtccagt cccaaagtta gcagactggt
       61 aaatataaag taacagataa actacagtca tatttgtagg caaaagctct gtttacaaaa
      121 taggctgttt tgaaactgta cagtaagctt cacaaatgct gcaccaaacc atactttgct
      181 ttatgcctga tcatcaggtg tgatgttaag caaaacttta tcaaagcaat ataccacttt
      241 cctgcatgct gattttacaa aactcactct ctgaacgttg ttctacatga tgtcatcaca
      301 ctgtaactca cttcatttac agtatctgtt tcacttctac tcacaagcta atataactca
      361 tttttttaac tgcgcacagg ctgctagaca catgtgcaca gcaaatggaa tctgaactta
      421 gcttaacagc ctcatttatt cctgatggtt taaattattt catcacaatt aatgacaccc
      481 cctcagcttc ctgtgcagag ctgccagatg ttcagagacc acaaagccac tctcttcttt
      541 gacggcgagt gacaagtcgt cctctgaagg acgttccctc agtgcacagg ccggatgaca
      601 cctccattgc tttgcacctc tctacctccc tgagtaacca cggtgagaaa agaaggaaga
      661 catgagaaac cagccagtgc attagtaagg acaaattaag tgaagcattc caaacttgaa
      721 ggatctcatc tcctcctact ggagtttcaa gcctgattgt tttatgaaaa cgacagacaa
      781 ctgtttgcct tgacctttga ggtgttttcc caaaaataac cat
//
LOCUS       KCKM01001532             951 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24189apa ultra-conserved element locus
            uce-3636, sequence.
ACCESSION   KCKM01001532
VERSION     KCKM01001532.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 951)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 951)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..951
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24189apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>951
                     /note="ultra-conserved element locus uce-3636"
BASE COUNT          246 a          188 c          183 g          334 t
ORIGIN      
        1 atgtatcagt gtgttaatcc agaatattta gagtacttgc gatttgcctc atcttttggc
       61 ctcagatgct acagttgagg tacatgtgtg cacactgaac tttgtaaaat agttgagggc
      121 tcttttaatc cccgtataag gccatgaact ccaaatagcg attcagactg cataagctac
      181 gagtccacct gtctctgtat acagtaagtt tagacactcg gagtcagtgt gaattccttc
      241 tcacaagtgt gccctgcagt gcaaagctgg ttttgagatt cctggggtta cgtgctagac
      301 tacaaatgcg ttttgcggat cagagcggag tcgagtgttt gcccattaat tacctcagca
      361 taagctattt gtcacatttg attttgttaa tatctttgaa gaaacgtgct ccctgttaat
      421 aggcttttat tccatgctgt tactttcagt agatatacct gtacttaaag actttagaaa
      481 ccattgcttt tgcccgtgcc tgctccttac gtgtaccgat tgcttatatg ttctgcaacc
      541 tctcctcttt gttactgctc tcctttcact ggatgggatt ggttccctgt ggggtcatat
      601 tagaccacgg gaaatgtctg ggtaacacat gaagaaatgg aaaatcttac agccacacaa
      661 caaacggtta gtttatagtg ttgccacttc tcttccttag agtgcttttt cccacttttt
      721 gaacatttga atcaagtgcc tttcaatctt tttttttttt tcttcttttt ctttcaaatt
      781 aatgcattaa aattccggat cattgctgct tctaattact aatgtgcatc ttgatagatt
      841 tttttgggaa aagaaaatca acactgataa gattgtagac aaaacattga tctgtaaagt
      901 ggagctctga tatggttccc taatagacaa attgaattat ttctgtggaa a
//
LOCUS       KCKM01001533            1082 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24205apa ultra-conserved element locus
            uce-4615, sequence.
ACCESSION   KCKM01001533
VERSION     KCKM01001533.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1082)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1082)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1082
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24205apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1082
                     /note="ultra-conserved element locus uce-4615"
BASE COUNT          286 a          196 c          253 g          347 t
ORIGIN      
        1 tttaatattt tgatgttaag gtaaatggat ctaatttatt atccatacca aggtagtgaa
       61 accgcatgat cagatatatt atgttactgc agcaggcaaa atgtatttaa aaaaatcata
      121 ctgaatagca cttcttgagg aaagatgggg gctggatggc aattgggcgt cgctgttaat
      181 tattctgctg atcttactca gattttgagt ttgatgattg cactgacaaa ggagcagcct
      241 taattttctg catatatgtt acaattactt gtaaaactgg gctcacagat ttctctgaag
      301 cttttactgt tcctgcagaa catttctgta gttccagcag tttgatcaca aatgcagcat
      361 ctctctcata atgctgtgca ggttgataaa acagttgccg agctggagtc cctaaagaaa
      421 ttattaatta tctggttaat gtgcatcagg ctgtgggagc gtgagattaa tcaccagtgc
      481 tgggatgagt tgctgaagtg gattttggtt tttcgtctcc tgtcactcgg taatggcttt
      541 tccttccttc accatcaggt gaacaggtgc ggagatgctg tattttcgtt ttcctgtagt
      601 cggtaacagc cggtgaccag gagatgcctt tttctcagtc ctgctgcatg agcagtttac
      661 aacatggagc gctacctgct ttggatgttc cagctgcggc ggatgctcct gaagcacagg
      721 actgacctga gccttctcag ataaacacat ttgaacacat gtgcttgggg agggatgcta
      781 gggaggagtg ttggaactgg ctcttctgta ttccctaggt ctcagagagg ttgacttgta
      841 tttggatgtg gaatcgcagt ttgactcctc ttttgaatgt atgtataata cttggaattc
      901 ttcactaagc aaacattcag catgcctcct ttgtgtaatg taacagaaaa aaaacatgtt
      961 tattggaaag atacagaaga aggttcttgt atctcagtct ttaggggtat tatccttaaa
     1021 ttaaagccaa tgagatgcat aagtattcag gcatggtaga atgagtcgga ctcctttcca
     1081 gt
//
LOCUS       KCKM01001534             763 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24221apa ultra-conserved element locus
            uce-7379, sequence.
ACCESSION   KCKM01001534
VERSION     KCKM01001534.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 763)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 763)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..763
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24221apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>763
                     /note="ultra-conserved element locus uce-7379"
BASE COUNT          191 a          193 c          207 g          172 t
ORIGIN      
        1 gctgaggctg ggagggaatc cctgcatttc tgcacgatgt gggtgataag acactggcag
       61 cagcgttaga taagtctcag agcccgctgc gtaagtgaga cgttgacaga aacaaaagaa
      121 aaaaatctct cccttctctc tgcctggaag agggagaggg ggggatgtgg atggtttgca
      181 tacatttcaa gcctcagcca aaatacaaag tgctttcttg tgaacgcagg agaaaaggac
      241 gtgaagcagg cagaagagga ggagaaagag caggggaagg atgcctcaat acaaaaaagc
      301 ttagcctgat aaaatattta ggacgggctc acacatcaga atattaatgc tctgcattcc
      361 ttgtgcttgc actctgttga tcttcattct ccagtgacct tgtttacagt atctgaattt
      421 gcagtctgca ttttaataag gccctgagag aaggtctgag acacagcgtc tcactgaacc
      481 aacttcaaaa ccctcctccg actggttgaa attctggagg atgggatctg gctccggggt
      541 gcctggtgcc cgctgaggac agatccgccg gagagcccgg ccgctgcccg ccccgatcac
      601 cgaccgccgc cacgggctgg gaaactgggg cagcacggag agggtcctct gtgcaattag
      661 ttaattatcc ttcccacctt gctcaaaggc ttggtggaag tctggcctcc tcctcacggt
      721 gctggcagcc tcttgcacaa tgcctgctcc cctctccatc atc
//
LOCUS       KCKM01001535             976 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24235apa ultra-conserved element locus
            uce-1207, sequence.
ACCESSION   KCKM01001535
VERSION     KCKM01001535.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 976)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 976)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..976
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24235apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>976
                     /note="ultra-conserved element locus uce-1207"
BASE COUNT          292 a          226 c          189 g          269 t
ORIGIN      
        1 tctaatcact gcagaggact ttgttaaggc acttccatag ggtggatgag ttcagattat
       61 atgtttctta aggtaagaag acatctcttc aaggaaaagt gaaactgtct cctagaatat
      121 caagaatggc ttaaatgatc ccaccaaggt ttaggacctt ctgaacctgc acgacatctt
      181 caggctggac tctggtaaca cagagagctt agagcaccac cacaaatttc tcagggtttc
      241 tctctagtta aaaagaaggg acttcccttt gaagttccag tactgacagg tcatactggg
      301 cttctccttc ccagactccc tgggactcca ggatctgaca gagacttcta ctgcgcatct
      361 gcaaccacag cgttttacct tccacgcggc ttgcaccccc agtcagggct cagtcactga
      421 tctagacaga gccaccttaa caggaatttt ggatgggtct tagcaaaggg gaggaaaaaa
      481 gaggacataa tgtttaatta taagaaatga ttgaaatagg cacagacata ccccgggtgc
      541 ctctgcactg cagcaagctc taaacttgtt atcgttaatg gtttaaattt cactgtgcta
      601 atcatttcag gacacaagcc tttcttgata atctaatgaa ttattccaac atccttcagc
      661 aaaaaaaatc ctccatgaca gcactaatta caagacgttt tcccagtgct tatgtaaaat
      721 atgacagagc agcagcttag ggaattgcag aaaactgctt ctaatttcca ctgagaaact
      781 gacaaacacc tctctttcat ctctcccagc tctcaagtaa gatttaactt tctcatttag
      841 ttaattaccg agtgaggatc atcattttcc cggatcggag cggcacagag cctttatcgt
      901 gttaacttgt gaacttgatc gatggctgct gctaaaactt aataacttca ccccctggca
      961 aattgtaaga taaata
//
LOCUS       KCKM01001536             757 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24264apa ultra-conserved element locus
            uce-3314, sequence.
ACCESSION   KCKM01001536
VERSION     KCKM01001536.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 757)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 757)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..757
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24264apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>757
                     /note="ultra-conserved element locus uce-3314"
BASE COUNT          206 a          130 c          168 g          253 t
ORIGIN      
        1 ttgcttcatc catgatctga ccctgggaag tgctgggtat tatctccctc agcatgtcaa
       61 gtaatgagca ctttggcagg gctttaggat tcttgaccct tctgatttga gccatagggt
      121 ttgtatttct gggtctgaag tcaatatgtg tttaaggtta ggtcagtcat ctgtaggtga
      181 ggttctcctt gcagtgattc tgtactttaa tcccaacttg caggagtgaa aatgtggcaa
      241 ccttaagtgt ataatttcct tcctattaca ttatttcttc cagtagagga ggtatccagt
      301 gtttgtcatt taggagtgtc atatcattac attgcatatt gcagtgtaat gatgtgaaat
      361 gattaaatga caaaatgcca gttcactgcc aaaaatctta agtcgcatac ttttatttgt
      421 ggatgggaaa gctattatta atttctgtat gggctttggc agatgaaata acataagcag
      481 actgaaaagg gaggtagctt taatcttttt ctaatttgaa tgtgagtagt aggagtgatg
      541 tccacctgta gtcctcactt cagagcatat gtccagcggc agtggtgtgc tgtcacacat
      601 tggcctagcc tcctgtcaaa taatgttagc agatatcaaa acaacaacag cctggtattt
      661 ttgaggggga aaatactcac cttcaaagaa tgctggtaag cagtgtaaga tattttgctc
      721 aatcttgttt cttagtatca acttgctaga ttaaaga
//
LOCUS       KCKM01001537             850 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24279apa ultra-conserved element locus
            uce-4313, sequence.
ACCESSION   KCKM01001537
VERSION     KCKM01001537.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 850)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 850)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..850
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24279apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>850
                     /note="ultra-conserved element locus uce-4313"
BASE COUNT          248 a          191 c          149 g          262 t
ORIGIN      
        1 aacaaacatg ttctgagctg gaagttacag gctgtgagga ttaaaaaata taatccatgg
       61 atgaaagaat tcctacatgt gaccacaaag tgagagttga atgctcaacc agtgcattgc
      121 tgcttttttc cgcctctcct gtagatttcc ttccgaaggc tgatattata ccattacatt
      181 cagcacccca tccccaaacc cagtgaacca tgattcaagg tatcaaagtg ctcaaattac
      241 agcatcctac tatttttccc tgtctctcca gattcgagat tttacacatg gcatcagctg
      301 acataggaaa cgttgtctta tttgggcaac ctcattctcc taggctgccg actgctttga
      361 gctaaacaat caatgctgtc cttctcaact ttttcctttc caattaatta atttaaattg
      421 accattaagt cagcagagtt tttgattgat attttcatta acaaccctct catgcagacc
      481 tgtccaacac ctaagaaatg tatgataatg tccaatctgc atgaaggggt ctgaacatct
      541 cccttcacct ctcagtgcca gtgagttatt actcgaattg tgcttgctgt ttcattgagt
      601 gtaatttgaa tacagattag ctgccccagt gttccagagc tttggcatta tcattactag
      661 ggacagtaat ttgactgatg aacacacggg ttatcacaag gtcatcacct tcacagtatt
      721 ggaatggtcc atcgtcccaa ttttggaggg aaggaggcta aacctttcaa tagcaaaatt
      781 aagtcctgta aattaacttg tccgataact tattgaataa atcctttact aattaaagaa
      841 ccgataggcc
//
LOCUS       KCKM01001538             770 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24295apa ultra-conserved element locus
            uce-1136, sequence.
ACCESSION   KCKM01001538
VERSION     KCKM01001538.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 770)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 770)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..770
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24295apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>770
                     /note="ultra-conserved element locus uce-1136"
BASE COUNT          269 a          138 c          140 g          223 t
ORIGIN      
        1 taaatgtatt gctgtttaag gtataagaag gtaccaagca aagtgcatat ataaacagtc
       61 actgtgggaa actggagaga gatttttttt tcaaacacat ttcttcactt gttccagtgt
      121 ctacaaaata cttcaataga atgacaacag agtcacattt cagacaaaca ttaaatagca
      181 ccaacatgtt aaatgatgat agaaaaggca atacttcaca gaaatatgta ggtgtctgtt
      241 gtacacaaaa ggcaaatagc tgttttgaac tgtgaagact gtttaaaggt ttagtgtaca
      301 ccttggattc ctgctgccta cataagtaca gacacctaaa tccactgcat actgggacta
      361 actgatcaaa gcagtagtta aatctatcca tggaaaatct aagtagtctt tggaggcaac
      421 tctttgaatg cagattagtg attccattga agtagtcaat caactgcttt tttctggttg
      481 ttaaaatgtc actgagtgaa cacagtggat aaaaaaatga tgagcaaaaa ataatatttc
      541 aacttgaaca aacttgctat ttgtagactg gatcacatga atctgctcca gtcaggatca
      601 tttcagaggt agctacagga atgaatccca caaagggact aagtttaatc atccaatccc
      661 agactgtatt gattttggaa ctacttgcaa tgactatata aataagccat ttctttgcaa
      721 ctgtatctgg agtcggtcat gaacccaaaa ccttcacaac ctggtccaaa
//
LOCUS       KCKM01001539             811 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24311apa ultra-conserved element locus
            uce-5037, sequence.
ACCESSION   KCKM01001539
VERSION     KCKM01001539.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 811)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 811)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..811
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24311apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>811
                     /note="ultra-conserved element locus uce-5037"
BASE COUNT          272 a          119 c          152 g          268 t
ORIGIN      
        1 aaagataccc agtaaaaaga aaaaaaagaa attacaggaa gttgtagctt agttatctaa
       61 tttatttttg tccaaaataa gatgacctga ttaccaaaag tggctgcgag gacatctatg
      121 tgagtattat ggaatactca ggtagcaaaa gcatcactgt aaagcaagag gccaagtgtc
      181 actggcatgt tttgttgatt tttgtgtcag taaatgaagt ttacaacagt gttttagctg
      241 ggagatgttt agttgcatac ctggatacta ttaatttact aatattgagt aactgttctg
      301 tatgtgccta gatttgttga acataatgtc tatatgttaa acagttttct attgtattta
      361 aaaattgaca tttcaaagag tgtaatagca taatgaaatg taaactgaaa acaggaatga
      421 gttaattaga ctaatgatcc cttgactcct ttattagcca gctctttaga aattgggatt
      481 agctttgttt tctctgctca ataaagacag gaaggatgat gttgattcta gtaaatgaca
      541 gcaccagaag aaatgagtgt tctcctgttc ataatagctt tcatcattta agataaaaat
      601 ttagccttcc tccacgcata cctaatttta ttacactttg agttcagttc agattggaaa
      661 agagaaatca ggaaaataat ttaggactaa ctactgattt catataatga tttcaaaggt
      721 gctccactct atattgtttc tggacctgag actttccagg tcttcacgtg aaactggagc
      781 agactgtgtt tgaatttaaa cagcattcag a
//
LOCUS       KCKM01001540            1160 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24325apa ultra-conserved element locus
            uce-7079, sequence.
ACCESSION   KCKM01001540
VERSION     KCKM01001540.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1160)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1160)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1160
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24325apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1160
                     /note="ultra-conserved element locus uce-7079"
BASE COUNT          304 a          252 c          258 g          346 t
ORIGIN      
        1 aacttctgca tctccctgag gcaccccagc actttgacca cagcgttcct cttccagctc
       61 cctggcattg cggtactgag cagtcttcct tatgcagctg cccacccttt cccgcatcga
      121 cttctccttt ctgccggccc tccctttcct tttccctcct tgtcatagtt tccacagtct
      181 ttttaatggt tttgctcggc attttattga ctgtggagca tgcatgtgtc cttttatgaa
      241 tgtttgtgtt cagaatgcgt gggctggtgt gtctgtgagc tgtgttcacg tttgtgcacc
      301 cgtgcaggta tttacacagc aggcaccaga ggtacaggag cagaaggtac tgcagcagtt
      361 tgtgtaaatg gcttgagaag ctgaacatga actcttacgg cagtgatctt gtccgtatgg
      421 agcgtgcgtg gtcatgagca cttctgttgt gcagccaaaa aaaggctgcc tctgcagtaa
      481 ggtaaagcgg gagataacaa taaatttttt actgctggct ggcagaggtg tttaggatgt
      541 gttttcttta tatcttcatc cgcccctaat tgaagatgct ttaaaattga atgactagca
      601 gtcaaaacgt gtttgcttca aactgagaag aaaaatgctg gtgtctctgc ttccaaactg
      661 attgcgcttt gtacacaact gacagccaca gtcactttga gtgactgata agtgggaagc
      721 tttgccactt atcaaggaat gcacgctgaa aagaaaggac tggagccgtt cagatgcttt
      781 ggcatgttca aaataacatc tcacatcagt cagactcaga ggcactagaa gacatttcaa
      841 aataaacttt atatctatct atctatctag aggcaaagat tcaatttaac agacaaatca
      901 ctgtgtggca tcacattggc tctgaaaacg agatcatcat tataagggtc accagttgca
      961 aaatgactca gatagctgca taatttgaga gcatttattg tagggtgtta cccccctgga
     1021 acaaaactaa atttggaaat tcacaactat gtattgttct ggtgatttct ttaaacaggg
     1081 gggtttatca ctgttggcca agtagtattt ggcttatata gcatgtgaca tcctgaagga
     1141 ttccaaggag aataaaaccc
//
LOCUS       KCKM01001541             919 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24340apa ultra-conserved element locus
            uce-3560, sequence.
ACCESSION   KCKM01001541
VERSION     KCKM01001541.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 919)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 919)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..919
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24340apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>919
                     /note="ultra-conserved element locus uce-3560"
BASE COUNT          314 a          176 c          158 g          271 t
ORIGIN      
        1 gcaccagcca tccaggcacc cattgccttt ctgcacacct ttggagagtt acctatttgc
       61 aaaaacttca cctgtgtcaa ataggttgaa ggaaacacgt gtcatagaaa gcctatgaaa
      121 agtagggaga gagagaaaca agaaaagcca tgaaataaaa acaagatccg cacacatctt
      181 atatgctgaa aaaataatgt cttttctaaa ttacgtgcaa acttgtttcc attttcgcat
      241 tctttaccgg gttttttttg gaagctacag aaaatgagca taagagacaa aaaagtactt
      301 cgccctgcag gaatacaaaa attgtaaaag cacaggcagc actacagagg agcagtgcca
      361 ttcactcaca aagaattttg tgcatgtaga tggctgatta attgctggcc tgcctagacg
      421 aagctgcaac gagccagata ctgtcagcat gccatctgtt accatggaaa tgcacaatgt
      481 tcctgtttct gacaaaccct tgaatactgg atagattgtg ccatatgtaa ataaggcaaa
      541 ttagttttcc tatatcttcc agacaaggtt agactaaaag aaaatatatc tgtttaaaca
      601 tactgtaacc tccaagatgt gaactgggta aaccttccta tataaatctc attcaatttg
      661 ttgttagaac tgaaacagtg tggactagaa ttaagcagca taaaattaat tcccaactag
      721 caatgtttac aaaagcagca cttaaagata tgcatattct gtatgcatac tacactcacc
      781 atgattatat ttttattttc tttttttttt ctttatcccc aattgtggcc atgttatttt
      841 aaaaatatac aaaaataaac agagaacttt gttatttgtt caggaagatt tagtgtagct
      901 tggatctttc aaccacact
//
LOCUS       KCKM01001542             970 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24355apa ultra-conserved element locus
            uce-2887, sequence.
ACCESSION   KCKM01001542
VERSION     KCKM01001542.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 970)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 970)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..970
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24355apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>970
                     /note="ultra-conserved element locus uce-2887"
BASE COUNT          333 a          185 c          172 g          280 t
ORIGIN      
        1 aggggaaaag tacagatagg ggctagactt taaacaatga ataaagacaa aatactacac
       61 tacccaatga aaccatggca ttcctacatg aacagtttgg gtaataatat cagttcttga
      121 ggctttaaat ttcatagaat ctgaaaaata ttaacctttc ataggaagaa aatccaaaag
      181 gtaaaataca gttcagcacc tattaaaaaa agtaaaaaaa cagtgcttat taaatgcagg
      241 aaataaagga caagcaagtt cttgcaaatt aaagatgtgg agcccagtca tttcaatccc
      301 tttcaatatg aaacaaatca ctcacactgg tcacgaagac agctccctct acactcaaat
      361 tattcacttg aagataagct cccatcaaac tcttcagggg tttaactaat ttactgcaca
      421 gatacggcac gtctgttgta ataacaggta ggatgtattg gggtcgacca tttatcagaa
      481 ttagacttct tttttcaatt cacagtgaat tatgctgcct acactgctcc tctttctcag
      541 agctttccat ccccttacgg cccctaatgt ggcaggcaaa caaaattgac agtctcgtct
      601 tgtcaacaag gggtgattct cctgagaagc catttaactt tgcagaggaa gcaatgtatt
      661 aatgtgcttg tcccaggaat gttaatcatc ttcaagctcc ctctaacttt gacatgaacg
      721 aaatcaccaa atttgtttac taaatgaatc gtaatatgct aataagagag catgacatat
      781 atggtaaagc caaacagatg gtttgtttac tccactttgc aactttataa atgttgtaac
      841 tctgaagatg ttagtgagaa ttattggttt gttggcagtg gcagacatgc cttttgcata
      901 cttaatccac agttagagtc agaaaataat ttgtcattgc cgtggaatgc ataaaaaatg
      961 ttaatgccaa
//
LOCUS       KCKM01001543             847 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24370apa ultra-conserved element locus
            uce-2766, sequence.
ACCESSION   KCKM01001543
VERSION     KCKM01001543.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 847)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 847)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..847
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24370apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>847
                     /note="ultra-conserved element locus uce-2766"
BASE COUNT          257 a          175 c          147 g          268 t
ORIGIN      
        1 agaaaaaatg tgtttaattt tgattttaat tgcattttta cttcaaacat ctatttttct
       61 cctccgtgca aacagacctg agcaatcttg caaagatcaa caaaatcttc cacaaatgcg
      121 aggcatttct ctcccgatgg tgtttggctc tgtgagcatt taatctgcta actttgactg
      181 aaagagctgt ctaattccta cagccagttt atttttaaat caacaaatat ttactgcaca
      241 ctgcatttta aaggatacaa ttattagtgt acctctgttt gattaccaat gacacagtaa
      301 taataccagc agctgctgaa ttgtaagtga aaataaccct ttgttctcaa tctgtagact
      361 ataacagcac tcatgggaac aataacctat gaaatagatt aaaagcctgt taaatgctat
      421 tttcagcttg gcagatcacc aaaccctagc ttacccttaa gcttggtttc cttttaaata
      481 ttccttttag tatagccatg tgacaacagt aatgtgcagt tttacagtga ttaagtaact
      541 gcacaaacaa gaggttttag gtttataaac tgaacggtgc tgctctcaca ggtgcataga
      601 actgtgctcc accaaagaca ccacggcttc tggaacgtgc tgtaatggtc taatctgcag
      661 attctccccc atgtctaatg accttaaact agagaagggg acaatgacgg tttcctattt
      721 ctggctggca gtgttgaccc ccctcttttc ccctttttac aacactagat tccgattaga
      781 agggaaataa ttcatattta ttcactgaat aattctgagg agggtttcca acacaatgaa
      841 tggggag
//
LOCUS       KCKM01001544             715 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24386apa ultra-conserved element locus
            uce-7552, sequence.
ACCESSION   KCKM01001544
VERSION     KCKM01001544.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 715)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 715)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..715
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24386apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>715
                     /note="ultra-conserved element locus uce-7552"
BASE COUNT          218 a          135 c          135 g          227 t
ORIGIN      
        1 aaaaataaca gtgagagtga aacattttaa agttcctgaa cttcccctcc cccttattag
       61 aatcctgaat gcttgccagg gcatcctcag tgaataccag aagtgtgtag tcacagtttt
      121 cttgccttga attgctacac cccaacagtg ttgatcaaca gcatcggaca tgaaagcttg
      181 acttaagtgg tcttactctc tttttcatcc tgcagctgaa aattttcttt cattttttca
      241 gatgttccta aacatggcaa caagcgtggc tctgcaacag atgcaatttt ttctaggtct
      301 ctaggtaaca ttttaacctg tgtaatgttc acagcatagc atcgtaagta atattccagg
      361 aaatacgctg ccgcttgtta aaaaggatag gaccccagag atgcctttaa atatgcctgt
      421 aaagtgagag gtgccaagag aaagataata tggctgatta tagttattta ccttacattt
      481 tcattcgccc ttaactgggt gtaatttagg ggcatgaaat ctcttattgg aagtgtattt
      541 gcattaaaca gctctaagca accatgaaag tgcagaagct gaaaaattga cagactgggt
      601 tcctagaatc ccaaagtagc atttttgtaa taggcataca aacaaatcaa ataaacatgt
      661 tttgcttcaa cgatttaaag aatatggtct ttggagtaat ttgtcttttt tttgt
//
LOCUS       KCKM01001545             815 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24401apa ultra-conserved element locus
            uce-4504, sequence.
ACCESSION   KCKM01001545
VERSION     KCKM01001545.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 815)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 815)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..815
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24401apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>815
                     /note="ultra-conserved element locus uce-4504"
BASE COUNT          275 a          147 c          135 g          258 t
ORIGIN      
        1 tttttgtttt aagggaacta agtattttac gccagtcctg actaagcaac aagacgtacc
       61 atattctgaa atggaaaata aaataacgtg aacatgtgaa tcaccttgaa gatgaatcat
      121 gttgctgtaa aacaaataat ttacatttaa ataacttatc tccttttcac ctaatttaaa
      181 agtaaccttt actcttgctc aactaatccc caaatttatg agctagtttg atcaaatttg
      241 tgcaataaaa ttgaaaattt tagatatggt aggtaatcaa ttttagtctc ctcatctgtg
      301 tttccaatct cattagagat tgcaattttc agtgcagatt acatgatgac ccatcagtgg
      361 ctttgttgtt tctgagttac cgattcctcg cctactgcca gataagaaca aagcctatgc
      421 atcagcctga cagcttgcaa acagaaaatg ggcttgtagg attggattta aatcccaggt
      481 gtaggggata attaccacat cagtcatgca gtaactgaaa aatggtattt caacaagaaa
      541 aattacattc cttttatagt gccaacagaa atcattattt gaggcttcat actgattcag
      601 tgtatcatta catgtgcact gtactcatta aatgtaatgt ttgttacaac ctaaaaaact
      661 tattgtttca gatacttttg tggctgagtt agctcaaatc aagatttgtg aaagcttgac
      721 aacactgagg tcattcaaag gtgtaatata cattgtacaa gtgaaacaac agcagagccc
      781 aaagcattca aaacctcctc tgcttcaggg aaaaa
//
LOCUS       KCKM01001546             289 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24417apa ultra-conserved element locus
            uce-5855, sequence.
ACCESSION   KCKM01001546
VERSION     KCKM01001546.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 289)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 289)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24417apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>289
                     /note="ultra-conserved element locus uce-5855"
BASE COUNT           90 a           58 c           49 g           92 t
ORIGIN      
        1 tcactgactg ttagagaaca tggaacccct gtttactgct ggttcttgag tcttaaacag
       61 ccctccactg cttttattat accagtaatt gcacttaatg taactacatt tctagtacgc
      121 ttggctaagc tctgaaaatt aagtagaggg tactttgtta taaaattcac tataatgagc
      181 tctggtggga cagggtctgt taagttttaa actgcctcaa gccatctcca aagaacttct
      241 taaaatactt cacatctata aaagtttgca actagataaa tagccaaag
//
LOCUS       KCKM01001547             886 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24432apa ultra-conserved element locus
            uce-1886, sequence.
ACCESSION   KCKM01001547
VERSION     KCKM01001547.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 886)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 886)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..886
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24432apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>886
                     /note="ultra-conserved element locus uce-1886"
BASE COUNT          274 a          165 c          159 g          288 t
ORIGIN      
        1 caatgcaata tgcattctgc cttggccaac catttcctat tgcagtcata gactgaaaaa
       61 tgttttaaaa atacacaaag ttcaaatgct ttcaaaaaat cattagtagt tttgtgctat
      121 tggaaacatt tcaatagttg cttttattga acaaaaagtc tgtgccatct acaaaaggaa
      181 atattgaaag aaaaatatat atggaaagtc tttatcagta aatagaatta gcctccttgc
      241 atttataaat caaataaatg gcaagtatgt tgttatgaaa catgaccatg tcttatctga
      301 agaagaaaaa gatcacaatg gcattaggaa atgcttgact ttagttagag gagcgtaagg
      361 gcacaagaac agatgatggt gccctaatag ccctttttaa gaatgacagg gccccgccat
      421 tagcatcctt ttatatcctt ggaaattgct catgcctcgc ttttctggtt cctatctgcc
      481 tgactctttt ttatttctct ttcaatttca tccgcgctcg gataagcgca tgctaacaca
      541 atatgattga gctgtaaaat ggaacgctgt cgcctctaat ctcttttatg tagatatgga
      601 ggtacttcca cactccactt cattctctct ccattgttgg cctttttaga atgtgttgcc
      661 gagtaatgga ggctcagtca aatattagag ctaggtttca cagggtgtga taagaagatt
      721 atcagcccag cagtcagatc tattgttgtt ctttgtgtca gattaaaata ttccgatgta
      781 ctgtaacttt gttagtaaaa tacttaggga gaggttgatg ccacttcatc tcctgcccta
      841 ttaactgacc taaataaatt ataaatatat agcctctgca agacat
//
LOCUS       KCKM01001548             693 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24448apa ultra-conserved element locus
            uce-655, sequence.
ACCESSION   KCKM01001548
VERSION     KCKM01001548.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 693)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 693)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24448apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>693
                     /note="ultra-conserved element locus uce-655"
BASE COUNT          210 a           97 c          132 g          254 t
ORIGIN      
        1 aatgcttatt ttattacgag cttcacagag aggacctcaa gacagagtaa ggtgtgaggt
       61 tatagtttgt ggttgctgat atgagcactg ccacaaaagg atagttgttt ttaaaatgaa
      121 tagctagcgg tagacattta attttttaaa tgccttgtac aaattccaaa accaacttca
      181 aactgttttc acttgtattg attttatgtt gtatggatcc caagctctct cctgttaatt
      241 ctataccttt gtaagacatt tgtatattgc ggaagtgttc attcaagcta tttaatacct
      301 ggcactgtta atacacagta ctttactgta cagattgttt tactgtttta attgtagttc
      361 tgtgtacttc ttttgcctgg ggaaataggg gctggcatgt ttttcctttg ttttctggca
      421 atacaacatg taagaattca aagcattttg tttgtagatg ctcgagtgtc agaatccttt
      481 acatttgact tttctaagaa aagcattttc agtcttcgta gtgtttgctt gagggtaact
      541 gattttattg aaaatggttt caaagtattc agaattgtac aggactgtaa aaatttgttg
      601 acaaacactg aaggaaaagc ttatagaaaa aagctataaa atatatatta ggttctgcag
      661 aaaatggaga attatgtaat atattgtaca aat
//
LOCUS       KCKM01001549            1033 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24464apa ultra-conserved element locus
            uce-1419, sequence.
ACCESSION   KCKM01001549
VERSION     KCKM01001549.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1033)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1033)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1033
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24464apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1033
                     /note="ultra-conserved element locus uce-1419"
BASE COUNT          306 a          222 c          218 g          287 t
ORIGIN      
        1 atgctctgta ggaaccgctg gcttggaaag aaaaaagaaa ttcatcaaaa acaatgtata
       61 tatttatcct agtttggggt tcggctattt ccagctcact gaacacttgc tagggactac
      121 ttgacaaata ccaaactgca aagtggtgtt ttgcttcttc tctagatcag atgccatgaa
      181 tttcaaatta atagacatgt ttactcgcta atacaaaatt tacacgtagt agcttataaa
      241 atatgaatat gttggtttct tgttgcaaaa tacagcattg ccatttcaaa aactaccaag
      301 acttcaggag gaaaaaacaa cactcagcct tcagaatacc tcacatttca ttctggtgag
      361 cctattattt gtagttttga aactttattg gtccccgatc taatcttttc tgagtatgaa
      421 aacattaaca tatggtttaa cacagcacag ggctggaaag tccatatccc aaatgcacat
      481 tgtatgcagg gtgacattca cactaaatat catcccacag ggtctgtact ccattttacc
      541 tggaattgga gagccatgaa atctctggaa aagttgttca tgagtctgaa ccaaatggcg
      601 tgcagtgtac tgagatacta gcagcgtgtg ctgctgccaa aggttgtggc tcaaatgtct
      661 ctctaagtaa cattaaaaat ctgctgcttc atgcctatga atttcaatat ttatagcgtt
      721 caataaaatg gtccactgtc agagagagat gtgccactgc gcgctctccg agcagatggg
      781 ctgcaatatg gcacatttac acggaccagc tgtggagtgc agaaatgaat gctggtcaga
      841 ggcaggctgg aggcaccaca tctggaatgc aaacagacct gcctccgcag ccccgggact
      901 tttcctgagc aggacgagct ctgatttagg gccgctcacc agtgtacctt aaactgcatc
      961 aagagtcctc attaacacaa gagactacag tgagctttag ggcctggagc ttctctgctg
     1021 ggcatctgtt aga
//
LOCUS       KCKM01001550             870 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24479apa ultra-conserved element locus
            uce-1499, sequence.
ACCESSION   KCKM01001550
VERSION     KCKM01001550.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 870)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 870)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..870
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24479apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>870
                     /note="ultra-conserved element locus uce-1499"
BASE COUNT          258 a          183 c          171 g          258 t
ORIGIN      
        1 actgaagtac gatactgttt acataatgtc ctttagactc tattcaaaac agcaaatgct
       61 ggacgtcgct gttatccacc aacaccagct aatacgggca aaaataaaaa tgtaatgcaa
      121 agtggcagct ccttttaact tttcttgaag tctctgtgta gtggctttga gcatcctctc
      181 tgaacttttc cccttgtggg tgctgggttt ttttaatata ttgacattcc agcccttgga
      241 acaaggtctt cactcctttt ctcatttcga gatcttgttt cgggagagct ctaacacctg
      301 tccactgatc gcctgccagt ctgcatctgt gcccagctga cagggctgtc tgctttgact
      361 aatgatgtga ttgatggaca aaataaggaa gaacacacaa aaaaacattt ctgtctggtc
      421 tggtgtgtca gcaagccttc atcaagtggc tgctgaaggt atattttgct gcatgcctca
      481 ttacacagta atggcattcc caggcaaagc tgtttctttt catgacacaa gacagcaggc
      541 agctttatgg actctgggcc tatcgagcct ggaggagaga agcactaaag agtggtcatt
      601 tccaaaagtg cctcaagttg cttttttgtt gtcatgaatt taatatgaat caacacaata
      661 tgaaatgagc atgaggaatt ttagtgacta gtcatttttt aagactgctg tctaaacagc
      721 catcaagaaa aaaaacattt tcttctacaa aacctgttgc aaaaaagaag tcatctgtca
      781 attttattac attaaaaaaa gtacgcagag gcggatagtc caaacaaatg tctacttcag
      841 tgctaaacat gtggaaaaca ccacatatcc
//
LOCUS       KCKM01001551             482 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24523apa ultra-conserved element locus
            uce-215, sequence.
ACCESSION   KCKM01001551
VERSION     KCKM01001551.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 482)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 482)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24523apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>482
                     /note="ultra-conserved element locus uce-215"
BASE COUNT          144 a           83 c          102 g          153 t
ORIGIN      
        1 tgatggcaat ctgaagtgac aagttttatg ggggaagttg tagtagggat gttcagcaag
       61 tttctgcaaa ccattaatcg aaggctgcag cacagtttag tcaaagctat tttatgtcat
      121 tccaaaggtc tcacaaggat gctgaaagaa tatttttctg ctctcagtgc cttggaatgg
      181 agtttttcta ggtcagggat tctttactgc cctatttagt gtcaaaaata cccatttgcc
      241 tcaaattagc agaaagcttg tagttaaggg ctagagatta agcatacaaa attactcagc
      301 aggtgactgc tgggtggatt tgggggttga gaagtcttta aaactgacta caagacatta
      361 tatacttctg acaaaagaac atagtaatcc tacctgcttg ctttaaccac tgttgtttgt
      421 ctattattat gtgctttaat gctcataaga gcaaaactac tggtgatact actcaattac
      481 ca
//
LOCUS       KCKM01001552             329 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24539apa ultra-conserved element locus
            uce-5234, sequence.
ACCESSION   KCKM01001552
VERSION     KCKM01001552.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 329)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 329)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24539apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>329
                     /note="ultra-conserved element locus uce-5234"
BASE COUNT          102 a           43 c           70 g          114 t
ORIGIN      
        1 acatggtaga gcaatcagtg tgtttgagca catgatgggt tgttagtttg tgttctgttt
       61 atacggagtc tctcagagaa actcatgaac tcctagaaaa gctttgaatg ctttgggggt
      121 gactgtgatt taaaagtgac agtaaaagaa aaaagaagac aaggaaggta ctggttaatt
      181 gacctttatt gtgccttctg gttcatttag aaatggaaat taaattagcg tgataattca
      241 gtcctactgt gttaagactg ctataaaccc attaaatttt atggccattg atttaacatt
      301 attttctatt aactgggttt aattttcaa
//
LOCUS       KCKM01001553            1063 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24554apa ultra-conserved element locus
            uce-5893, sequence.
ACCESSION   KCKM01001553
VERSION     KCKM01001553.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1063)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1063)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1063
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24554apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1063
                     /note="ultra-conserved element locus uce-5893"
BASE COUNT          281 a          178 c          190 g          414 t
ORIGIN      
        1 gatagagaag gttggctgct gaaattaggt tagttttaag ggcaattttg ctgctgtatg
       61 ttcgttcttt gtttagcatg tttgcggctt ccgtgtctct gctttcctgt gaaggtaata
      121 ggattaattt tgtaaaaaaa atgtacaaac caaagtcctt tacatctgaa ggctgttact
      181 ccttacttta catatccaaa ttagcaatct catttcaaac tttggagttt tatttctgat
      241 atatgagaaa taaaaactca acaacaaaaa ggaaaggcca tatggtattt accacatgct
      301 gtgactgcta aataacaact aagtctccat aaggtcattt cagaaaactg tgatgtttca
      361 actcagtttt ctgtgtacag aaaaggattt ctcttcaaat tgttattttt gtgtgtcttt
      421 atttttccat attatttgtg agtttctctt ggtttggttt tggctatgat tttttaatga
      481 gtggtttaaa tgtgccttct tgttttcctt atggcctatg acctatcacc tttctgttct
      541 gtgactggct gtctctgctt attctgcatt aggaggtacg tatctgattg ctttccagtc
      601 ccctcttctt cagttgctca ttcttttatt ttcttcctct ttcctcccgt ttgtttttct
      661 ttttttttta aatcaaattt attgtggcat tttgcttttt cactcagtgt cactagtatc
      721 atcagtggta ctctaagact ggcatgtctg tgtttagctc acatgccagt ggttctgcaa
      781 aagaaagtgt ttacgtgtaa agcagaaaaa tctatttagc atatttttct tgttcattga
      841 agaaaaaaga atttctactg agagaaaaca acatatatta ctcatctaat gaagttccag
      901 agtgatcttg ttacttgtat attaattatc ttacatattg aaagatggat tacatctgag
      961 ctatgctttt gtaaaaaatg tatcttaaat aaggatcaaa ttaggatgga agaaacctct
     1021 ggcaatttgc agtgtccggg cactgcaaga gggccttgtt tac
//
LOCUS       KCKM01001554            1140 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24569apa ultra-conserved element locus
            uce-62, sequence.
ACCESSION   KCKM01001554
VERSION     KCKM01001554.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1140)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1140)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1140
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24569apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1140
                     /note="ultra-conserved element locus uce-62"
BASE COUNT          383 a          255 c          222 g          280 t
ORIGIN      
        1 ggtcaaggga tgggaaccag ctgccaggcc ctggtcccag cagccaggcc agctgacgag
       61 atagcaacaa ccagatggta cggctcggat tgtctctctg ctctgaggtg gcaacgggat
      121 ggcacaacat ttttctgcct gactgcttcc aatcatgtct ttccccaatg gcaagcctgt
      181 acaattacca gcactccagg aggtctacag acaagccttt accccgcaaa caaaatacag
      241 cttgtaggcc ataccagctg ccaaaccaca cacatagtga taggtttaaa gaggtctgaa
      301 aatctttcta tctccatagc gtgggcaata aaaatataac cgtacctgca ggaacgaaag
      361 ctttaaatga caccgtataa tgcacacaat aatacaaact ccaacttaat caaaatgata
      421 atgacgtatg ccaatcctac attacttgaa attgagcgat ttttacgttc tgacaagttt
      481 acagaactag gataaatggc atgaatgatt tcaatatatg ctcatacttt tgaaccaaat
      541 ggtgaaggtt aaaatctttc ctttcaaggg cctcaatcag ccacaaagga aaacagtaat
      601 cactgtcttt tcagccagcc caaccgcatt tgtcagccct ttctccgtca atgcagccag
      661 agcaatcaac ctgccaaaca ttcagaatgg aaaaacaatc tgaaaataca gggtataatg
      721 cacctgccag tgaaaatggc catttcaaga aaagctagtg atctcagtga ccctgctgag
      781 gaggcggtgg tgcaaagggg aaagaacgcg taaaagaatt cttagtgatc tccactctct
      841 tgcacattga cacttcctta caaagcatgc caattacagc ttttgtgcta cttaaaaaaa
      901 atgaaagctt ttttgggcaa aataatcacg cagagaaaca gaaagacact gctccttttt
      961 tagatggatc cacatgtaca gcagactagt aatctgaaaa ctgggtaact tgtagcaatt
     1021 gtaaagaatg gaatgtttaa tgtcaaatca ccagaggtgt gaacactgat taattaaaaa
     1081 atgtaatatg agctaacaca cgtgattttg agaacaaata caggacctca tattcacatt
//
LOCUS       KCKM01001555             512 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24584apa ultra-conserved element locus
            uce-2938, sequence.
ACCESSION   KCKM01001555
VERSION     KCKM01001555.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 512)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 512)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24584apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>512
                     /note="ultra-conserved element locus uce-2938"
BASE COUNT          124 a          148 c          125 g          115 t
ORIGIN      
        1 gacccctcgg gccccgggac ctgccagccc ccgccccggc cggaggatga tccccgccga
       61 gccagccaag agcacatttc gctcctcatt tgctttgtgt tccgtgcaga ggtgcaagaa
      121 gaaaaacaaa accaccaacc ctccagtcgt gcctttgggg aagcgggagg ctacttcaga
      181 caaaactgtt atccattaac atccaattat cacttggtcc aagccattaa ttataaatca
      241 gcctcctaat tgggataatt agctctctgc tacttaatgt agtatgactg atgcgtttgg
      301 aaagaaggca atcagtccat ttgtttagcg ttaggcgaac aaatccaact ctcatggttt
      361 aatttcagct ttagcctccc ggccccccat cagcattaaa agctctttgc ggccccatta
      421 attgtttggg aatcacggcg gagatggaca cacgcagctc cgcggggctt tcgaaagggc
      481 agaccccggg ccggggatgc gacggggccc gc
//
LOCUS       KCKM01001556             663 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24600apa ultra-conserved element locus
            uce-2823, sequence.
ACCESSION   KCKM01001556
VERSION     KCKM01001556.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 663)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 663)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..663
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24600apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>663
                     /note="ultra-conserved element locus uce-2823"
BASE COUNT          171 a          146 c          137 g          209 t
ORIGIN      
        1 ttgttggttt tctactagca gcttgcctac aatccaccgg cccaccaccc tttatgtata
       61 tatgttgaat aattatgaag cagtgagtat ttatcacctt ttctgagcag taagcagaaa
      121 gaaatacaat actattactt ccagctactg gctttcccaa gataattaga taacacagtg
      181 gactgaagcc ttggttagtc caatgctgtt caagttaagt gattgacatg cctctgtctg
      241 gctgctctat taactgtttc attttgttgc tatttgcagt ttgcttggct aatacttcga
      301 acaaatacag actgtttctt tagccccttt tttctctttg accttctcct gcccattttc
      361 tttgagtcac ttcaaactgc cttgaaaagg ctcgttgaat gcgcacagtc catcagagtc
      421 ccaggttcat cccattcctt gccctgaatg ctttacttca aagatgggcc gcattcttta
      481 attgcccttt gaattaatat caaagggtca caatgcgagt gccaaaagag aaagaggctt
      541 taatgaagca aagagctgcc attcatttgc agataagcac gtttttatgc ctgactgggc
      601 accgcggcta aatgctgcgt gaagaggagg cagggcgagg agaagggact tttgcttaag
      661 tgg
//
LOCUS       KCKM01001557             877 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24616apa ultra-conserved element locus
            uce-1216, sequence.
ACCESSION   KCKM01001557
VERSION     KCKM01001557.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 877)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 877)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..877
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24616apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>877
                     /note="ultra-conserved element locus uce-1216"
BASE COUNT          242 a          219 c          215 g          201 t
ORIGIN      
        1 ggatgtgtcc tctggtattt gtggcacctt ccttcagcct gtccttgaga tggcagagat
       61 gatgaattca tcagtcctta tgcaagagcc cagaggagcg tcgccaggag ctcagcgttg
      121 ctgcctggag ggtggtgaaa ggggaagaaa gatttcttct tatgaggatg aaaaacaaac
      181 ccaaaccacc aaacctgacc ctacagaaca aaaacaaccc caacaagtac ctcgtagtca
      241 gaacagcctt ttaaagcctc atgaatattt agcttgtcct catgtaaaat atatgacttt
      301 gtgtaaggat caggcaaagg aggtgcatga tttttttctg atttatgggc ccggcaacgg
      361 attattcata gcagagcagc tgtgtggaaa gattcatcca ctgcaaaatg tgattgtaca
      421 tcaggcagtg tgagggaaca gagctatgac taatggctac tttacatata aatgagaagg
      481 tttgcgctag gaactgtaaa aaaaaataca atcgctcagc tgacgggccc ggcctcttta
      541 tcgcaagcac tgcgcagggg ccagggaaag actggaacaa gcctgcctga aggcgctgcc
      601 ttacctcaca tcctccaaca tgcaataaat aaggcaatgg cagtcgaggc ttccaagggc
      661 caaatttgtt gctggtgtca atctgcaagc tgcaatcgag gaaggcagat gtggctcctt
      721 ctggcttgaa tgcctctgga agcccctcct gcctggcctg gaccccgctt caagcgtcat
      781 gttcaaaagc agaagggcag cacgatctgg ggtgctcaac acagtcccag cataagccct
      841 tcgcttctcc tccccactgc gatcacagcc tccccca
//
LOCUS       KCKM01001558             609 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24632apa ultra-conserved element locus
            uce-1774, sequence.
ACCESSION   KCKM01001558
VERSION     KCKM01001558.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 609)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 609)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24632apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>609
                     /note="ultra-conserved element locus uce-1774"
BASE COUNT          188 a          100 c          119 g          202 t
ORIGIN      
        1 aaaataatct tccagggact ttgacttaag caaaggcact ttagagtctt tttctaatgt
       61 cattctgaag ttaaaaaaca atttgacttc aagggagata cggcccaatt ttttaaaaac
      121 ttaataggat tagtcatggg aactattttt agcaaaagtt caactttatc catgtatttt
      181 aatgtgggaa aagtgtgtcc ttttccctct cctaatgttt gatgtattcc agccctcctg
      241 cgagtgtgtt tgagtatctt aggggctctg gagtggagga gaacttcctc tcggattctc
      301 tctgttttct ttcgtgaaaa tgacattcct aagctgtttc actttctgac aggaaatgga
      361 gtcttgccaa aaatgattaa agtccaagaa agcataacag ttccaaagct gcagcagttc
      421 ttcaggagtc ccgagtttga cattgtgtca aacaaatgtg aaatattgtt taataaattt
      481 gaataataca gggaaaggga aaaatggttc ttggcttata atgctggtgc tctttattaa
      541 gtctgtaaag gactgcctag ctctaataaa ttgaaatata tacataaata tacttgtgca
      601 tggataaca
//
LOCUS       KCKM01001559            1049 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24648apa ultra-conserved element locus
            uce-2748, sequence.
ACCESSION   KCKM01001559
VERSION     KCKM01001559.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1049)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1049)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1049
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24648apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1049
                     /note="ultra-conserved element locus uce-2748"
BASE COUNT          293 a          248 c          191 g          317 t
ORIGIN      
        1 atgcaacact tccctgtgcg atcacttgtt aaagccccgg ctcctgaact ggtgtatttg
       61 gccagcaatt aagaagctcc ctgcatgaga aatcctcctc ctcacagaat tcttagccct
      121 cgttccctaa tgttagccga gcaaaacagt atatctttat acacacagtg cgaccgccaa
      181 gaaatcaatt ctgtgtgttt tcttcccctt tacactttta aaggaccgtg agcagttttc
      241 tgtctctggt tcttttatgc atcctttcct agctttaaag tggtgcctga gcccttcccc
      301 tgtcccctga aaaagaaaag aagaggcaaa acaaaacagg tagaattcct ctgttactat
      361 taacacctaa aaatatgatc acgaaacaaa agctttgctc ctctgtccaa tttgatgtct
      421 ttttcatgcc gcctcggtga tggccaaata attggttgtt cacttgtgtc cttgtctccc
      481 ccgacagttc cacagatgcc ctgaacaatg ctccaaaggc tgctttcagt aggggcaaat
      541 cctcattaat cattcctggc tgacagcaca agggaacacc tgcatctggt gcagggacca
      601 agcagtggct tctgggagcg cgcattaaaa agaccaacca attcaagttg tgggagtagg
      661 cttctaatag ccatgtgaaa aatctgtctc acgctggatt tttctttcat taaatatcta
      721 aaattagacc tgtggcttgt gttgagatta aaacaccaat gtattctaag caaatcagga
      781 aatgaacagt actgtatgtt atgataaatg gctgctaaat tctttatgtc tagatcaagc
      841 aatgttagca ttaaatactg atgaactgtc acataatttt catttagaaa tgactgcact
      901 ttgagcttca tgtcctgtgg tgctcataaa tatttttccc tgctatattt cacaaataga
      961 ctgcactgac tatgcagaga tttttaccac agagtcccaa gtccatactg tatataaact
     1021 gctttccttt gccagcacat cagcctttc
//
LOCUS       KCKM01001560            1044 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24663apa ultra-conserved element locus
            uce-7534, sequence.
ACCESSION   KCKM01001560
VERSION     KCKM01001560.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1044)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1044)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1044
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24663apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1044
                     /note="ultra-conserved element locus uce-7534"
BASE COUNT          312 a          264 c          170 g          298 t
ORIGIN      
        1 tcaaaacaac acattggtac tatctgcctg ccaagtcttt acaacaaaat actaaaataa
       61 aatattcagt ttctttatag ctgccgctaa atgattccat ccgttggtgg atactttcct
      121 ctcctacttc acaatctttt gcatttatat tccccatctg agtagttatc tggctttttc
      181 tcaaaacaca gaaccagtct gatctggcat catgctgcca aatttgtttc acacgaattc
      241 tgtctgtctg cgtgtgtgcg tgagagcatg agatgcagag agagcacgca ccacacaccc
      301 tcattaactg gaaagatata taattaaacc agaaagggtt aaagtgtgtg ttaccctatt
      361 ctacttttct acccgttact ttttaaaaag ctttcatatg tcttcttcct tgtttctgaa
      421 agctaaccat cccttctacc tttcaggaag gctgacattt gacagcttaa catagctgac
      481 agggttaccc aacagcccac cctccctatt ctcaatccaa ttagacctct aatcctccag
      541 atgaaaggcc caactactca cgttcctcat gacaacgaca gctattgatt atttgtcact
      601 acagctaaca ccttctctgt cgaggccact ctgacagaag caaacctacc aaattagaca
      661 gcactttatc tgccctggag gccaaatggc acaacaagta aaggctaata aatggtataa
      721 aaatgaacaa atcataacat tatgacaggt tgatcgttgc cagcagcttc acagctcaag
      781 cttgatgctc tgttagacct gttccttctc ttttctcttc cactcgtgct ccaactttga
      841 ctgaattaaa ggccagaaca attaaggcat ttgaccagca aagataagct aggatagaag
      901 tatcatcaag ggacacaaat gtcaatagca gactaccgtt tgtcaataaa aacattccag
      961 agatgcaaat gctcatgact ctgctctcca ctaggctgta ctgactccct ttgtacagag
     1021 ctcttctcaa gcccaggcag aaac
//
LOCUS       KCKM01001561             627 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24679apa ultra-conserved element locus
            uce-4573, sequence.
ACCESSION   KCKM01001561
VERSION     KCKM01001561.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 627)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 627)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24679apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>627
                     /note="ultra-conserved element locus uce-4573"
BASE COUNT          182 a          139 c          127 g          179 t
ORIGIN      
        1 gggcccgcca gggcctgggg aagggagatg tcttttccct gcccttgcta cctatttgat
       61 taaaggtcgc cgttgtgcag actgcggatg atttcactgc ggaacatttt gacatgcaaa
      121 tgatggcaat taatgccttt gaaacaattt acgatttccg gcctacttca acatgtatta
      181 gcatatacct ggtttcttta atatccactt tgtttttcca aaaccacaaa cacagttgct
      241 ggaatttcat gtggaagtgc ttaaggggtt gaaagttaac acctttgtga gccgagcagt
      301 ctcacagttg ctgctaaaca aaagcctctt tgtagaagct ttctcgaaat gttttcttaa
      361 catgttccaa gtagttttag gcaggcaact aaagtaaaca agatgttacc atgataaaaa
      421 cacttgtgaa aacattacag agtgcacttg gtttctttca cataaactcc ccttggtttc
      481 atcgaagtta aatgcgcacg aagccgatgg gcagcatcct gggagaggac cttggcaaca
      541 cctctcccaa ggtctctgtc tcgcttttca agaatatatc caagtaaaaa aaggtacaac
      601 cacgactaag catatctaaa ccacaat
//
LOCUS       KCKM01001562             538 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24695apa ultra-conserved element locus
            uce-3678, sequence.
ACCESSION   KCKM01001562
VERSION     KCKM01001562.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 538)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 538)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..538
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24695apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>538
                     /note="ultra-conserved element locus uce-3678"
BASE COUNT          131 a          147 c          109 g          151 t
ORIGIN      
        1 ttattaaacc tgaaaaatgc gtataaatgt aaataacaaa tgactgatac agggagaaga
       61 accaaagcgt ctgctggcgt caccctccct ccctctctcc ctccctcacg ctccttcctc
      121 cttgtgtaat ttgcattaat aaagaggctg ttccttgtcg gaatgtgttt catccggttt
      181 aaaatcccag ggcgatccac caggaacagc tctgggagaa tccgactgtc agagccgaca
      241 agacaaatga atcccggtgt caggagcgtg tggttcaacg atgacagatt gagaagaact
      301 gtccccctct cgacaggcgg gcttcatttt caaattaata aatctgaata aaatattttc
      361 cctttcatta cgagccgagc ccggatgaca gttcccgtga caggagggag tcgcagtgtt
      421 gatgaggaga ctttgcatga attccacctg ggcttcttcg gctttatttt tacctgcaat
      481 tttcatccct gtttacttct ctccccttcc ctcctcccct tgccctctct ctcacgct
//
LOCUS       KCKM01001563            1041 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24711apa ultra-conserved element locus
            uce-2698, sequence.
ACCESSION   KCKM01001563
VERSION     KCKM01001563.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1041)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1041)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1041
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24711apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1041
                     /note="ultra-conserved element locus uce-2698"
BASE COUNT          304 a          256 c          187 g          294 t
ORIGIN      
        1 ccgactactg ttctcttctt agaagcaact ccttctcatg tcaactattt ctccttctgt
       61 ttgctcttct acatccatgg aaagaagaag gaaagaagct agcttgctgg ggccaacatg
      121 ctgtccacac actgtcttca gggagagatg gaggatcagg aactgttagg actaaaatat
      181 ctatggcatt tttttcaaag ctgctcctcc tcctctgcta accatccaag cgtagctctt
      241 ctctctcagt cttccaagct gactccttgt aaatgacttc agtaaaatgc gccagaatat
      301 tctactgcac aatcgtcgtt aatctcacac attgccctag tacaacagtg ggagagtaag
      361 ctgttgttga gataactggc ttccattagc aaccatgtga ttggcaggac gataaagtct
      421 tttcccttgc aggtcagctg ctttttaaga agagggcaat cctgctgatc catcttttag
      481 ctacagtctc tcactgagtc ccaaatctcc tgccttttag ctttgatacg gttcaagctt
      541 tcccccttgt atcagcccct acctgtcatc agctcctctg taccgaacag ccaatatcag
      601 gagtttgacc tcagggcaca gtccgggtgg gcaggtaaaa cctgaccact ggatctactt
      661 ccttatcttt catatcctgc aattcatgaa gaagtatcaa attcaaacta aaaaacagaa
      721 gcatgacctt ttataagaac tttctgaaaa aggctctgtt gcctttctaa gtattcttga
      781 aaagaactgt catccaacct attaagatag aaatagatca caaataagga ggagagggaa
      841 aacactgctg agtgttttta acgggcgctt gcaatacctt ttgttgaagc acacaaaaat
      901 atagtaaaaa acccccacaa atcaaaacaa atatactaga actattctgc acctacaagc
      961 tccaactgca actcagtaga gttgtccagg cttttactat tcataaagta tcccattaga
     1021 tacccctggc acacagagca t
//
LOCUS       KCKM01001564             813 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24726apa ultra-conserved element locus
            uce-7473, sequence.
ACCESSION   KCKM01001564
VERSION     KCKM01001564.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 813)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 813)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..813
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24726apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>813
                     /note="ultra-conserved element locus uce-7473"
BASE COUNT          273 a          130 c          150 g          260 t
ORIGIN      
        1 aagaatagca caaaggaaaa tttaaaaata aatgtaagga aatttgtctt aaaacagcca
       61 gcatatttgg atcaggttca gaatgttttt gcctaacaat taaatgaaaa ttctttatat
      121 ttccagttcc gcagcatatt atttaaacct taagcctctc taattaagag gaatcattaa
      181 atttatgcct actgcctgct ttaaagttta tttgctaata agcaactgga caagggatgt
      241 gtgaaatgaa tagttgaaga agaaatctgg cagcaaaaga gaggtctgca gggtgaagtt
      301 ggtttattag gcactgtttg tcatgaatgg gtctactgca cgtacaaaag caaatcccac
      361 taccttagaa gattaattct gaaggaggca ctcgtgggtc aaagtataca taagcgtgtg
      421 cctaatctca gagaaatcag gctattttct cacagcaatt aagcggaggt ctagggtttc
      481 acccacagtg tatttaaaca caggatacaa ttaaacccca aagtattaat atctgtgctg
      541 tgcaaaattg cccaggaaat agatttcgcc ctctttcaaa tggaaagcaa ggcaaattaa
      601 ggaggatgac tttatttgag taaaaattat cccgaaacaa atgtaagtca ttcattttta
      661 actgttaatt ccttatgtac actttttttt ttctttttcc tgcttacata atttactctg
      721 gaatctacaa tgttcagtgg ctatatgaga tcaatattgt tttgttaaaa ataattttgt
      781 tttcatggca gtacaatttc tacagggtaa tgg
//
LOCUS       KCKM01001565            1059 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24741apa ultra-conserved element locus
            uce-3995, sequence.
ACCESSION   KCKM01001565
VERSION     KCKM01001565.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1059)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1059)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1059
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24741apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1059
                     /note="ultra-conserved element locus uce-3995"
BASE COUNT          318 a          246 c          189 g          306 t
ORIGIN      
        1 aaaaacgatt gacatttatt tctagaagtt ccctcaaagc aaacaattac cagcctaaga
       61 aagatcagtt ttaaatcaga aacatttttt ttcctgtaac atctacagtc tgtttcataa
      121 tgggcagtct ggtagcacaa actatttcac catacctcac tttttaacag acaagccaga
      181 gagccccaac atcccactgg ccagggctgt tggagctgca gtgacagaaa tggtaggaaa
      241 cgaggacagc taaaaaacag gcctagggta tgttcttgcc cttcaccttc agaacaggat
      301 tatacaccgc tccacaccgg caccgcacac gcacccaacc acacttcacc tcttctctgt
      361 agatctcttc tttggaagca aactagaagc ctgcattagc atgctgtatt ttactctcac
      421 cgctagaaat actgagggtg ctatttgtaa ttgtattctt ttaagaggtt tgttctctgc
      481 agctgttttc tgcttgcagt gtattttgtg taatcagcac atcatcataa atacattggc
      541 tgttcccccg agggaagctg tcactgttta atttacagaa caacctggcc aatgtgaatt
      601 ctaacactac agcactctgg caagaagtta ccacagtcgg aaaaacaggt ttctatgaat
      661 ttttatatca agagctggtc ccaggacaat ttaagttctt gaaatagatt ggttttaaaa
      721 gcacttcaca caccatggga cagattcttc cccactttca gtttcttaag gcagcaccaa
      781 actcactctc ataccacatt ttaaaggtga caatcccaac accctacact gatcatctta
      841 aatctgactt ctaccaagag aaggcactga atgcaggtgt cttatgctac acaccagttt
      901 gtttcatatt tatttttaaa attaaggaca acctaaagca tgagcagtgt tagctgtctt
      961 catttcagca agggaacgta ctctattgca aggtcatatg ttattaccta catcaaagga
     1021 ttgccgtgca gtttattact ctgaagatgc gataggaga
//
LOCUS       KCKM01001566             804 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24757apa ultra-conserved element locus
            uce-5457, sequence.
ACCESSION   KCKM01001566
VERSION     KCKM01001566.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 804)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 804)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..804
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24757apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>804
                     /note="ultra-conserved element locus uce-5457"
BASE COUNT          250 a          140 c          169 g          245 t
ORIGIN      
        1 gttattacga gcacctactg gctgcctctc actgcttgac atggtgatct ccacccccaa
       61 agggaagaat taaaagcgtt cgttatgcac gttacctttt ttattcgata aaaccatgta
      121 cccaggtatg acttatgttt tgcagaggaa agatcagaaa cactggttgt tttgtaattg
      181 ttgatcagac tagtgacacg tcaaataatc cattattcat gaatatggag tgttctgaaa
      241 tgttgctgtg gtgctcttaa ttacattttt taaattgttt atacaggaaa aaataaaata
      301 acccagtgca ttatgaatgt tggaagtacc agcaacagca aatcacagac tttaccagag
      361 gctattcttg ctctgtctca gcatcaggaa actaaagcat atgttggatg ttagcctggg
      421 tgtacactat gtgtcctatt tattcaaggt tttctttgaa gccacaactt acaagtttgt
      481 ttcttagggg tacatgtcag acttcattta gcatttgttg atattaggat actcctgaat
      541 agcaaaaagg caacattttg gggggagaac gtggctgcta tctgagcagt gatctgtcag
      601 ttccacttat gtagctcaag gaaaactgga gaggaggcac tgtggaggag ccgggctgag
      661 atctcaagat cacaggcaga attattttaa agcactttaa atggaagaat taatctccat
      721 ttaaatgata catagttcat tatgttaaaa actaggaaaa acattaaagc ggggatccaa
      781 cgggccagaa tatttcaatt taaa
//
LOCUS       KCKM01001567             884 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24772apa ultra-conserved element locus
            uce-6964, sequence.
ACCESSION   KCKM01001567
VERSION     KCKM01001567.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 884)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 884)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..884
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24772apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>884
                     /note="ultra-conserved element locus uce-6964"
BASE COUNT          229 a          190 c          235 g          230 t
ORIGIN      
        1 agcagacaga gggattcttc actcctagca cagagcaaaa agttacctcc ttctgatagt
       61 ggatgttaaa aaaagcctct accagcagct gaggagaaac caggggcaca cgtggcctgt
      121 ccccgacaca cgtccccatg agaagcatcg cgggctgctc cgcatctcat ccacggctcc
      181 cgcaaaaaac acagttgtga caggccagta atggtttaaa tggctttgaa aaataaagtt
      241 ggatttgttt cctgggattt aaattggtaa attatttgaa tttctccacc cttgggtgag
      301 tgatttagat ggccttgacc ccagcctgac tgcagggatt aatgtggtat aatgattgct
      361 gaggctatca ttgcagcagg catcattaat tatccttatt gattgtagct ttcaaagata
      421 aagcattatg ctgactggaa aataccctct tcctgcaagg tcaaggctaa aatagggcag
      481 ctaaataatt gcattaacaa acaaagaaat aaaaataacc tctcggagag atgtgtaatt
      541 aagatccaat taaaacgttt ggccctgctg gcggagcgat gttgcctggg atgcgggaga
      601 tgggatgtgg gttggaatgt gggatgcagg gtttgggatg tgggacccag agcctgaagg
      661 tctgaaaata ctcctggtaa gttcaaccaa acgggtcaga tggagggagt gatgattggc
      721 ctcaaatcct gggtgatata gtggcatttg aagaggtctc ggggctgttg ctgccgctgt
      781 ctctcccctg cttttccctc cggcgcgttt ctggctgcct cgagcacccg gatgctttgg
      841 ggactcttgg ctgcagattg ctcctgggac acgatgcttg tcct
//
LOCUS       KCKM01001568             771 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24788apa ultra-conserved element locus
            uce-2517, sequence.
ACCESSION   KCKM01001568
VERSION     KCKM01001568.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 771)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 771)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..771
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24788apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>771
                     /note="ultra-conserved element locus uce-2517"
BASE COUNT          232 a          142 c          150 g          247 t
ORIGIN      
        1 tccaagagat tgttatgaaa ccatatactt agaaatagga aacagttcag aagttctttg
       61 taaaatttag aaagtgaaga ctgctatgtg ttaaggatgt gcaaaacaaa gacgtggcta
      121 atagctccct actcctcttg atctgaatag ccttaagtct ttggtgctga ctgcaaaata
      181 aatcgtgacg aagcaaacgt tggccacttt gtttcctcac tgtaattttt agctgatttc
      241 tgtgtgtgtt atcaacatgg cagcttaagc ttatggagag ttcgtggtgc ataaatcttg
      301 gctccttttt taattgcaat gaattgtcac tattatgtag ctgatcttgc aaattcagaa
      361 atattcagta ctttaattat gcttacttta tttaagtgct aaaggccgca acaggcctgc
      421 aattgctaga atactaacag cacataatac agccaattgc aaacagcagt ctaatttgtt
      481 ggtttcaagt gaggtgtaat tatattgctt catttgctga gcaaatcata tgagagcttc
      541 tctaaatcag cctgattgtg taatgaagag ctaattacaa acagcagtgt tcttgcagta
      601 aatttatggt gactgctaat gccaggttgg cagcggtatg acaatggctc attagtacat
      661 ttacaaaagc aacagtggaa gtctgcccaa agcacagcaa ctgttctcta tttcgggaac
      721 acaaagtgat tacctctccc ctttccattg ttggtcttta actaaacctt c
//
LOCUS       KCKM01001569            1033 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24803apa ultra-conserved element locus
            uce-7342, sequence.
ACCESSION   KCKM01001569
VERSION     KCKM01001569.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1033)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1033)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1033
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24803apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1033
                     /note="ultra-conserved element locus uce-7342"
BASE COUNT          310 a          198 c          210 g          315 t
ORIGIN      
        1 tcttatgttc atatcccagt gcaagaaaca tacgcagaga tacaaatttt aaatgctgtg
       61 aatagtctag tttgactgtt gccacagtct gtaaataata ttgtattcag tagtttaagc
      121 aaattaaagt aggtggagga gcctttcaaa tgtgtctaga agacagaggt aacataaaga
      181 aatgctcttt atgcaacctg ggaaaaagga gataaattgt tcttgcatag aaaacaaagt
      241 ttcacctcct ctgctgctct tacgcccctt ctcctagttt atttttgctc ccactcaacc
      301 ctttcatttt attctgttga gtgctgttta acatttatta cttctttcac ttcagggtgg
      361 agatgcagat gctaatgtta gtcattttta gagatgggaa tgtgtacttg tgtcagcatg
      421 cttgcagatg atgcctaaaa ctgtggttgc ctctcagagc gactctgact caggcagtgt
      481 ggaagcaggt tcactcttcc aaggagcact ctgcataatg aaattccggg gctgactgca
      541 caataagtgc ctttgcttca tcacagtcat gctttcttac atcattacag ttaaatttcc
      601 aggcaccaaa acctacattg accctgaaac ctacgaggac ccaaatagag ctgtccatca
      661 attcgccaag gagctagatg cctcttgtat taaaattgag cgtgtgattg gtgcaggtaa
      721 ggctgccatg gcttcctgat tcaactgttc catttagctg ggatcgaaac tcatacatca
      781 taatgacagg caaataatta tacctcaagt atagaagaac ttttttcatt tggcagagtg
      841 gttaagagca atgaagctgc actcgcttct aaaatgtgaa aacaacaggg gaaaaagaaa
      901 acacagcaaa aaccaaataa ataagtaaat taagagtctt gcttgacatt caaagcttgt
      961 gggtttctaa ttctgtatct gctgttaaaa atgtaattga ggggatgggg acatttttgc
     1021 tgcctgttat tta
//
LOCUS       KCKM01001570            1074 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24818apa ultra-conserved element locus
            uce-6117, sequence.
ACCESSION   KCKM01001570
VERSION     KCKM01001570.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1074)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1074)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1074
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24818apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1074
                     /note="ultra-conserved element locus uce-6117"
BASE COUNT          341 a          224 c          185 g          324 t
ORIGIN      
        1 agcacggctg aagactaatc ttaataattg tttgttgttt ccactggagg caggtttccc
       61 tcatgaaaga agtggcatct tggagtttca gactaaaaca cagaggcgag agcagctttt
      121 ctttccgtta gaagaacaag acagccggag cacgtagctg cctcgtgtag ccaggcagcg
      181 aatgactccg tctctcttgt ggtaaccaaa taaagttgtc aaaattattt ttaagtaatg
      241 ataaggtacc taaaccaaat actgtataga aaagtaagga atatatcagc atttaaaatg
      301 tatatgctgc tgagcatttt tactgtcatt tctttaagaa aagcagacct aattagctgt
      361 atctctaaag tgcgtaccta gcatttttat tatgtattat aacattttgc ttagagttga
      421 catttttatt ctgacaagca ctgtctggag agctctcaat aaataataca tttacaattt
      481 tcagtaaata agcactggac acaaatcgtt atccttactt acagctgccc ctctctaata
      541 gtgcttttac aagtaaggtg actattcagt ctaatgcaat actctcagtg ctggaaagat
      601 attttcattc attacctcag tcacaggcac ttaaagcact ttcaggccct gttgcaaaac
      661 agtagatacg gcaaagcaaa caagaccaac taaaactaaa gttcattacc aaagaaatcc
      721 gaggtcagtc gccctacaga actcggacga gacaatggca tacaagatgg gccgcattca
      781 agccctagct ttccctcgta tttttatatt cgcattagca attttagaaa gtgaagtatt
      841 acagtctagt ccttactatt aacctgaaaa atttatttta attcccattt taaagcatga
      901 tccgaccaca acgttgttgt gtcacagtat atcagaaacc aacgaagtct gaatttattt
      961 ttctgctgtc aagatcacac aactgaagca actctccata tttttacagc tatttactca
     1021 catgcttcac tgcggaactc aatggcagtt gtacccattc atactgaact tgcc
//
LOCUS       KCKM01001571             544 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24834apa ultra-conserved element locus
            uce-7364, sequence.
ACCESSION   KCKM01001571
VERSION     KCKM01001571.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 544)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 544)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..544
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24834apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>544
                     /note="ultra-conserved element locus uce-7364"
BASE COUNT          213 a           89 c           84 g          158 t
ORIGIN      
        1 tatagaaata gaaggcatac tgaacttaag gtataattga caatgtccct tccttaaatt
       61 aaaaatggaa ttccaggctt taaatgagag aagcacaaca tccaccacca aaagccactt
      121 tcattttcat ataaatatgt aactatcatt tgtttaactc acaccaagct atcaaatttt
      181 gtggtgggct ataaacttgt tgagtcatta gcccagctgc ttaatggagg aaaactaaat
      241 tcctgttcct gcataatgac acttattcac tgtagacatt tgcatcacta ggtaacgata
      301 aagcctcatc cttcataatg aagttctgag ctgacaaaga agaaaatata ctgttgtggg
      361 acaactatga atataaaaca agcttaataa agaagtagtg acaaattata ttatgcaaaa
      421 tgcaatgcaa taaaaaaaat gttactaact cattggaaat gtcgtaaata atctaaatag
      481 tttttaactg tcaaagcctt gaaaaatata ttccttaaaa aaatgaggta gagaatagat
      541 gcca
//
LOCUS       KCKM01001572             816 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24849apa ultra-conserved element locus
            uce-2955, sequence.
ACCESSION   KCKM01001572
VERSION     KCKM01001572.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 816)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 816)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..816
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24849apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>816
                     /note="ultra-conserved element locus uce-2955"
BASE COUNT          239 a          182 c          209 g          186 t
ORIGIN      
        1 ttttgctatt cattttaatt ttcatacaaa gattgtgttt tcatccacat aagacagttt
       61 gcaaacaata ctgtttaaaa catgacgtcc gagccatatt ttaagacact gatgtgacag
      121 tgtccgagct ctccgaagca cggcgcgccg caggaggagc gctcgggggg ttctgtgcca
      181 gcctccccgt gtttcaatcc ttgattgttt actcaactgc cagaggatgg tctaaagccc
      241 tggggagagc aaaacctgtt tgggccattg acattgagta tccttggtgc aggaagtcag
      301 gaccttagat gtatccatca ttacgcctgc ctgaaggcag gctggagcca aggaacttgc
      361 ctgagaagct agtaaaattt taatgcactc tgtagtgtgg tcatgtcata ttcggttatg
      421 gcaaataatc ccagatgcct gcagaggtaa aatggagctg taatgtgctt gcctcctaac
      481 ccgagctgac agcaatgatg tacgactacc attagcggaa aatatcactt caactaaccc
      541 atgatccagc tccgctaagg gtcacattat ccatgaggaa caaattacac tcccaaagta
      601 aatacaaatt ttctacacga aatgggtaca aaaaaaagga aaggggagcc gggcggagga
      661 agggggagag ggtagggggg gcaaggagtg atacgctacc tacgacaaca tgctgccgag
      721 tgacaaagat gataaaggac aggacaaatc atgggctgaa ggcgccgtgg cacagccagc
      781 ccggagagca cattcccaag cctggaaaca acgtgt
//
LOCUS       KCKM01001573             926 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24865apa ultra-conserved element locus
            uce-7609, sequence.
ACCESSION   KCKM01001573
VERSION     KCKM01001573.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 926)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 926)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..926
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24865apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>926
                     /note="ultra-conserved element locus uce-7609"
BASE COUNT          255 a          193 c          191 g          287 t
ORIGIN      
        1 gggcagatgt ttcaccctgc tatgttaagc catcttgaca tactgccatg aaatgcaaac
       61 aactgctagt tttaacgttg ctccatatct ttattaaacg atacgtctca tgcatcttaa
      121 ttccccatgt acatgctatc tttctctctc ccccctctcc cccattacac ttctttcttt
      181 tcctccctaa agagggaggc atattagaat ttccttgctg ttctgcctga gtggttaatg
      241 aggttctaga tagcataatg aatatgcaga gctattgatt cttgtgtgtg tgtgtgcgcg
      301 tgtgtgtgtt tgtgtgtgca tgtctttaat cacagctgga atgcaaaatc aggctccacc
      361 tttcaactct atctccatca tgctgagaga gtgagagaga gcgagactga gactgctaga
      421 cagctcgaaa gagattgcag ctcagatgtc ctggaaaaca gcaaatccct cagacctggc
      481 agattccgtt accatgagaa ctgcagatat ttccattgtg atggcttgct ctagcagcca
      541 tctgttacac ccatttgatt aggaagtaca gttcagcttg tatgggattt tcgctgcacc
      601 ttatcccatg gcaatgtaga gaaactctct ctctttttat atgctaaact caatgttttt
      661 aaagtgctgt aatttactga ggctgaaggc atttaatgaa atgctaggag gaggtcgctg
      721 agggacagta tctctgagaa gaaggaagaa catgagatat atgaagggga ttagcgtcca
      781 gtatataaat aagatcaact cagaaattaa ctgtatttag caattcctca tccttgccag
      841 ggagaggagc ttgatataca gacctcatga agccataata aaattagtaa ttgcctactg
      901 ttagttaatc ttactccata tatatt
//
LOCUS       KCKM01001574             455 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24879apa ultra-conserved element locus
            uce-2129, sequence.
ACCESSION   KCKM01001574
VERSION     KCKM01001574.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 455)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 455)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24879apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>455
                     /note="ultra-conserved element locus uce-2129"
BASE COUNT          155 a           70 c           85 g          145 t
ORIGIN      
        1 ggttgtgttt acaggagata atcttggtaa cttcttgtat ttggatgaga aatggaaaca
       61 tgggaactct agtctcttga gtttttccta ggtacctact aattgttaat tattagagac
      121 taactaagtc actgaagtga gtcgtttggc tggtgtctca aatgctgtca tttacaacta
      181 cacaaatcag cctagtgata gagtgtcttt aaattaggtt acaaccatgc agttattgga
      241 cagggagtaa ttgataaaac cattagtaac acttgtagag ataacagcta gcaaaatcat
      301 gcaaccataa ttattcctaa tggatacatg ctataaattg tggcaagaaa aaaaatcttg
      361 cattatcttt caatcaaatt tgacagtcct ggtagattac tgtagactaa atgctcatgt
      421 atgaaaaaaa aaatgaccta tcagaatatc tttgc
//
LOCUS       KCKM01001575             912 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24893apa ultra-conserved element locus
            uce-4792, sequence.
ACCESSION   KCKM01001575
VERSION     KCKM01001575.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 912)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 912)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..912
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24893apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>912
                     /note="ultra-conserved element locus uce-4792"
BASE COUNT          266 a          173 c          169 g          304 t
ORIGIN      
        1 tcaaagacta ggagtattaa cgaataatta tggttatttt tttggcagag ctattcaaaa
       61 gaatatctca gtaactgcag tgcagacact aattactctg taatgatcac gaaagagatt
      121 ttggagaaaa tgccgccaga ttttggatac aagcatccta tttttctctc ttgctgcctt
      181 tgtgaactac tgggaatact caaactaaaa agtgaaatat gtcatgaatg actcaagtaa
      241 gcatgcgttt gttttgtgaa aagacttgtg tttcatccca gagcctaatt cagtagattt
      301 atctgctaca attacagtgc tttgatcact ccagaatagg tggtgtagtg cagggtgtag
      361 ctgtcctttt ccaattcact ctccttatca ggatacatgt ctgttgattt gtgggaagct
      421 ggctgttttt cgttcctgac aaactccagt gattaaaatg tagtggcttg ctcttgttcc
      481 cctgataaag gtgacagctg cagagtttcc agtgttagtg gatatggtcc atgcagattg
      541 ctttttaatg aaagcaatat attatcttac ctagagaccc tgcagcctta ccttgttaat
      601 gtattctggc ttggcaccac attcatctat aaattagttg tattaaacat gcttcttact
      661 atttatccag tctctaaaga gttgggttag ttcattttgt ttgtaacttt gcttcatacc
      721 tcctccagca gcagcatcat gcactcagtg aacaatggtg tagatttctc ataaaaatat
      781 ctagcattaa acaacatagt cacagacacc tccatacttg atgacttgat aatccttcac
      841 atttagccat taaaatatgc actaaaggat gtggaatcaa caacacttga ttatacaagt
      901 tatctgcaaa gg
//
LOCUS       KCKM01001576            1070 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24908apa ultra-conserved element locus
            uce-940, sequence.
ACCESSION   KCKM01001576
VERSION     KCKM01001576.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1070)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1070)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1070
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24908apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1070
                     /note="ultra-conserved element locus uce-940"
BASE COUNT          309 a          199 c          182 g          380 t
ORIGIN      
        1 tatttgcaga tgtcttgaat gtcctgtagg aggctaacta tctgacttca tcaatgactg
       61 tttgtctatg cgatgttgca ggtgtcagtg acacatgagt gcaaggctgc aagtccagct
      121 tgatagatat gtgcagccta tgtgttatca aaaatggatt acagaaattc aaatgtgttt
      181 ttaatgtcac ttcacattca tttttaacgt ttttttttcc tttgcagtat aatccagtat
      241 gatccacatt actgtatttt aaaatgatgg ataggttacc atccaaatta tttgtaagac
      301 ataaatgacc attgtatgtc tctttgaagt cagaggatgt attctgtatg actcaatcat
      361 taaatcatct tacaaatgtc taacaaagca cctgcattta accatacttc ctatatttac
      421 atttttggcc tctttctaag atcaggcata aatccatcag gccactttag aacttcagaa
      481 cttccttctt ttacatatct actgctcatt atccagaagt tattctgtcc cctgtgttaa
      541 attactttat gctgcagctt aaacgaacat gtcttgcttt catctagcat ttcaaatagg
      601 gcaaagactg ctgtacaatt tccaaacaca actgtgctaa cagagatgaa ttactacagt
      661 ttatataatt tatattagga attcatagac ctagcaaaag ggattagtac attttatttc
      721 agggtaggag atgatcctgt cattaatggt cgatactttc atcatctttt aaacctgagg
      781 aatttcctgg gtgacaagac tgtaaggaca tatcagggat tcacagctgt gagctttatc
      841 tggccatgta ctgctttact ctcagtatgt ggactatgtt ccatcaaaac tggattagac
      901 tgtcaatcat gtcctgcaat gtatattgta ttatgatttt ttgaaaatgt cactgagatc
      961 agagtaattt cttggctaat tgcatctcgt ctcttcttaa tactctgcat ttaatggttt
     1021 cattacctta catgacaatc actgagtcta gtccagcatt aagggcagtt
//
LOCUS       KCKM01001577             949 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24924apa ultra-conserved element locus
            uce-6347, sequence.
ACCESSION   KCKM01001577
VERSION     KCKM01001577.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 949)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 949)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..949
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24924apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>949
                     /note="ultra-conserved element locus uce-6347"
BASE COUNT          244 a          235 c          279 g          191 t
ORIGIN      
        1 gccttattct atcactgtca gtctggttat ggggcatttt ccagagccta atgtgttaga
       61 taaagggctg ttaacctgga gtgggtccca gcccctgtat caggtgaaac aaagtccttt
      121 gcaaatgctg tctctagcct ccaaagagga cttcgttgaa cacagccaat tctccctctt
      181 gcccacttcc ccacgaccac tccccgcaca cagctgagaa agatcatgtc cccacccaac
      241 cgcaggagcc ctggaggagg aagaagcttc tcatctccac ggaaggagtc cttacctgag
      301 aagaactggc tgatggagtg tggcagaaga gtgaggaagg ccagcgggtt cgcaaaggac
      361 atggagagtg cagcagaaat gtaagccatg cctgccacca gggagtcgag gcaagccagg
      421 gaggtgtaga ggcagaacat gatgaagttt cgcatgtttc tactcccgat gcagttccct
      481 gtgaagaaac agtggtggtc atgcctctgg gtgactctgg cacacagtct acagaagtga
      541 gtgctgggca aggctgagcc aggggacctg cttccatcca gccagtctgc caacacttcg
      601 gctcctttgc ctaagtttaa gcccttgccc aagtcctcgg gggagttctg gatcacaagg
      661 acgtagttgc ccagggcatt agctgagagg aagaggaaga gggccccatg cagcagagca
      721 ggagagaaaa gtggggtggt ggaagggtct ctgaacatgc tggggatgaa gagaaagatc
      781 tggaggacga aggtcactag ggagatgcac aagaagtagg ctggagcgac aatattgagc
      841 aacctgagaa ctatcattgc ggattacgtt cctgcggggg aaagcaagga gagaaggaac
      901 atcaccgctc cggctgcaca cttcatcctt ccatttcctg ccgggtccc
//
LOCUS       KCKM01001578             947 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24940apa ultra-conserved element locus
            uce-4586, sequence.
ACCESSION   KCKM01001578
VERSION     KCKM01001578.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 947)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 947)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..947
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24940apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>947
                     /note="ultra-conserved element locus uce-4586"
BASE COUNT          261 a          179 c          242 g          265 t
ORIGIN      
        1 ggaagctccg gggtttccgt cgcagtccgg cggctgatgc ggagctgggt tttgttgttg
       61 gcgtgctgct cccgtcacat ggcgcggcgc tgcaaacctc cggcagccgc ggcgcggggt
      121 gggggagcag agcagcaact gcgaacattc ctcctccaag caaatgcttg tcctaaactg
      181 agcaccgtag aataaaaatg gaaacataaa aatagcagtt ggaaagataa aacagcattt
      241 atagtactaa taaaaccgtt gtggcttcca caggaaaaca tgctttgtaa cctaatgctt
      301 acctggaaag actgtcgagt ttctgagagt tatagctgtt tttgtaagag aagcacagag
      361 atttgcttca gggctgagtg atagattctc ctgcctggag catcccagtg tgtttataca
      421 tggcttgtat ggcagctttc ataagacatt taccccatga tttgcgatga gcttatgtgt
      481 gaataattaa tggcaattaa tccttaatta cagtaattag gcaagtcaca ggaaattaag
      541 ctgcagctgg agaagaccat gcctgggaag agaggattgg gggctgtgtg aatgtgccat
      601 tcactgacaa cattacgagg atgagcagta ttcagcagct ttggcatttc tattggcagc
      661 cttgggtagg acaagaacgc tcaacattag cagcaatcta tagttgtcta caagagtttt
      721 tagttcaagt gccaaaatgt tatgttgcat atggtgatta tctaagttta ttggttgcca
      781 taattcaaac gggtgtaatt gtttttggct tgatagtgac attagaaact gaagctttta
      841 tgcgttcgta ggttctgctg gcatcagccg tggttcgact tctagaaaca attcatccag
      901 gtttgcaatt atgaaaacgg atactacaaa tggcttgaaa ttaacgg
//
LOCUS       KCKM01001579             837 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24956apa ultra-conserved element locus
            uce-6909, sequence.
ACCESSION   KCKM01001579
VERSION     KCKM01001579.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 837)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 837)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..837
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24956apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>837
                     /note="ultra-conserved element locus uce-6909"
BASE COUNT          247 a          142 c          176 g          272 t
ORIGIN      
        1 atagtttaaa acatgttcac agtaaacctt actttattcc ttcatggatt ttaagtgttt
       61 tagactaatt actctttgat acagttctta ctgaattagc tataaaaaca gttaatgtaa
      121 gttgctttta attatgtgcc attaatttgt ttctctcctt ttgtttgtca ggaaaagaag
      181 aatatattgc gacattcaag ggatcagaat acttctgcta tgatttatct cagaatccca
      241 tacagagtag cagtgatgaa ataactctgt cgtttaaaac gcttcagagg aacggactga
      301 tgcttcacac aggaaaatcg gctgattatg tcaatcttgc actgaaaaat ggagccgtct
      361 ccttggtcat taatttgggc tcaggggcct ttgaagcgct ggtggaacct gtgaatggga
      421 aatttaatga caatgcctgg catgatgtga aagtaaccag gaatctgcgt caggtaacag
      481 tacaatggat acaagaataa ctgacttttg ctatgagtaa atgcttgatg atttgaaaat
      541 tgcatagtgt gacgttggat gttaagcagg catctgatta gttttttaat ttgcacaagg
      601 agggatattc ctgccacact tgagcagggg catatctaga aagtagtagg gcaagcagct
      661 gtctgagaca gtatcagtta gatgtttcaa agactgtagg tatcacccag gtgtttctcc
      721 agtacaactg tctgcccttg cagtcttgca ttagtcaagg ctgacagctt tccataggac
      781 atgagttact ctgaattgca actctttaat taaaatgaat gttttatcta ttttcct
//
LOCUS       KCKM01001580             315 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24972apa ultra-conserved element locus
            uce-5581, sequence.
ACCESSION   KCKM01001580
VERSION     KCKM01001580.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 315)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 315)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24972apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>315
                     /note="ultra-conserved element locus uce-5581"
BASE COUNT           96 a           68 c           54 g           97 t
ORIGIN      
        1 ctaggaaaat ctaataatat cctgcttttt ttttccctaa gattcagcag gtaaaagctc
       61 tgattgaatt tcatcttgat ttcattaaat attcataaag gccaattaga agggcagcta
      121 agtaggccac aaggccccct tccatcattc tgtcaaaggc agtccatcag acagtcctgt
      181 ttgcattagg gcctggtagt caatatcttc attcaatctt tatgtagtat ccctctaaat
      241 cactgctcca tcccacttta cggcttttat ggacagacaa ggggggaaaa aatctaataa
      301 ttctaaaggc aagat
//
LOCUS       KCKM01001581             766 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 24987apa ultra-conserved element locus
            uce-3345, sequence.
ACCESSION   KCKM01001581
VERSION     KCKM01001581.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 766)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 766)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..766
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24987apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>766
                     /note="ultra-conserved element locus uce-3345"
BASE COUNT          237 a          150 c          135 g          244 t
ORIGIN      
        1 tcctcagaag acaagatcct gaactcagcc taaataccag cattatgagg ggaaacatcc
       61 agatgttaca gtggcagaag aaaatccata aaccagatat aataaagaag tgattgtaga
      121 aaatggagtc ttctgttctt gtgcttttct accactcagc ttttcaaaga gatagcaaat
      181 attctgtgtg ttaacattta acctaaagta ctaggtccaa tctcacatac tcaaataaat
      241 cataatgtct tttcaattag tttgcttttt catttgctgc tgtcctgaat aattaggaaa
      301 acaatttaca tttcactagg agatgatatg aagtgttatt cctgtgataa ttaccaagct
      361 gcagttcagt ttccctggct cccaccaggt catcagggca caaaagagga caccatgaga
      421 gcattaatga gctctcattg aagatgttaa aaagcttgta ttgatctgtt tgtccaagaa
      481 ggagatattt aagcctttct gctgagggca ggagagacag agattcatat cacaaagcct
      541 tttatccaac cccttctgtt tctggcttca atattgccca gtctcagcat gtctggttct
      601 ggaggtcata cttttaaact ttcacaacat tttttttctt cttctctttc ttctttttgt
      661 ttaaaaagga aaaaggagat aatatacaat gtacacttaa cctttactac agggatccct
      721 ttacacagct agctatttct gagagcaggc ttcagtgcag taaaat
//
LOCUS       KCKM01001582            1038 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25002apa ultra-conserved element locus
            uce-4998, sequence.
ACCESSION   KCKM01001582
VERSION     KCKM01001582.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1038)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1038)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1038
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25002apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1038
                     /note="ultra-conserved element locus uce-4998"
BASE COUNT          339 a          163 c          175 g          361 t
ORIGIN      
        1 acagagatta cttcagaagc gtgatggttg aattgaactt tactttctga tgttttgctt
       61 tctgaattaa attgttggac aagattaatt gcatgcagta agagatttaa atgaatggct
      121 ttataaagca ttaaagttct aagtatgtca catgggaaac aagctgtaag gtttaaatga
      181 ataaatgtat ttaatgcata aaatgtctag gctaattttt taattccttt actaacatct
      241 tttattgaaa aaccatactt tattcatcca tcttagttat actgctgtgg ttgtggtaat
      301 ttaatattcc tgctcttcgc taatcttctg gttcaacaga agtaaacaat agctttcata
      361 aattaaaaat acgctcttca gaacatgctt ctaaagataa aaaacaaggc tgtaaacatt
      421 tatgactgaa acaaactaga ttgttcaaat actgccatga tgtatcatgt atatcaatat
      481 ggcactgata tcagttagaa tgcaaacaag gttttaaatg atgtgcccct tcatttcagc
      541 tggagaatcc gctttacacc atctgcctat cagatggtta ggaaccagga ctgcgtatta
      601 atgccacatg ttcgattttc tttcctcttg taatggttag attcatattg ctaatagctg
      661 tgcatgagca ctgtcgatga aatttgtgtg acgatggagt gatgagatat ttataaagct
      721 gcctgtctca ctgcataatc agcaggaaga atgccagaca taaacaactt atcaatttca
      781 gaatattaat gacaactacc attgacttta atccattgaa tgtttttgcc tggatacttt
      841 ttaactgttc aaattaatac ttgtaaagaa tgcaaaacat gaaagtggct ctttggtatg
      901 atccttattt cattcattta gttacattta tagatgactt ctagttatcc catttttgaa
      961 gataaaattt ctgtagtgta gaaaagcgtg cacttcagaa attccttggc taaaagtaaa
     1021 atgaatactg tttagatc
//
LOCUS       KCKM01001583             904 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25017apa ultra-conserved element locus
            uce-6320, sequence.
ACCESSION   KCKM01001583
VERSION     KCKM01001583.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 904)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 904)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..904
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25017apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>904
                     /note="ultra-conserved element locus uce-6320"
BASE COUNT          291 a          161 c          196 g          256 t
ORIGIN      
        1 gctaaataat atggcatgtt cataactgtt tttttctgga tatacagcca tagtatactg
       61 acagtatggc tgccagctat gcttgtgaca ctgactgtgc aattatccaa aacagtttta
      121 agactataaa catccaggca gtctgattcc cattttgcta ttgcagaaag ctggcatgaa
      181 aagatacact acagcaatgt gttgttctga ttacattcct cgtaaaattg tctcgtgtat
      241 cagaatcagt ccctactgtt cggagctcat ctgtctggtg aggagtcaga ggagaaaaag
      301 aatagatgga atattaaatg ctttcagaaa acaaggggga aagtgcacta gcttttaaag
      361 tgaagcagca tgtatcgttt ctccttccat tggctgttta tccaacatca atacaacact
      421 ttaggagcca aattactaaa caagctgcca attaggcttg cagtcagctg gatagattag
      481 tggctgagag gcagatacaa gattttcatc tcttgagcca attacgcaag tgaattacca
      541 tccacaatgc tccttggaag atttgaggta gaaagactga ctctgctgtg atagacataa
      601 gtgagatcca gggtaggggg taagggttag caggccatgt attgccaaaa ttacccaagc
      661 aaaaagagat ccttctagga aaggatttaa aggatttaag gctgctggga gcgatagaag
      721 aggaaataat agttgtgata tgctctgcaa aaggcatcgc tgttctgctc acaagtctta
      781 atcatataaa agaaagatga aaggccaaga ctatatttat gtacagtgtc attttctcag
      841 aactgtttaa aacctcgttt tcttaacatc aaaaatagtt cggtggccag agatgaaatt
      901 actt
//
LOCUS       KCKM01001584             332 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25032apa ultra-conserved element locus
            uce-4869, sequence.
ACCESSION   KCKM01001584
VERSION     KCKM01001584.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 332)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 332)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25032apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>332
                     /note="ultra-conserved element locus uce-4869"
BASE COUNT           82 a           73 c           71 g          106 t
ORIGIN      
        1 ttgccctccc caggccttcg ggaagcagag attgcatctg cctttaatta ctccctctct
       61 acatatcaga tgctcgtgca ccttctgcac atgaatgctg attaattgca gggttaggct
      121 ccgaggcagg ccggaccaca ttatttctga tgtttgctct tttcacgagg agaataaatg
      181 ccatgaatcc acagtaatca gtggctttta gcttgtcact cttatgacac tctttactta
      241 gaccaggaaa tggcaaatgt ggtggaaata agaactttat tatctctttt tatttttttt
      301 ttctcccaaa agagagatgc gtggtgagga gg
//
LOCUS       KCKM01001585            1003 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25047apa ultra-conserved element locus
            uce-367, sequence.
ACCESSION   KCKM01001585
VERSION     KCKM01001585.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1003)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1003)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1003
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25047apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1003
                     /note="ultra-conserved element locus uce-367"
BASE COUNT          331 a          157 c          165 g          350 t
ORIGIN      
        1 atgttaatct acttctgtat gttccagttc ttaactggaa tacgttttgt ctaataataa
       61 tttttttgtt cgttagagat gtgacatagt atacttctaa atacatactt tcagaagaag
      121 gaatcttcct cttttaaaaa gacaccacga tgcatgtata cactttgtgc acaaacattt
      181 taatttctta ttttctttac agttagctga agtaactgtt atgtgaaaca ataaatttct
      241 caatgtatga ggtctttgtt aaattcacaa gtttttatca gggctgtatt ttgtggagaa
      301 tagaaatcca aaatagaata ttagaaaagc attgagagac tcttcagaaa cgttgtgttt
      361 taatttataa tgtataatct atacatactg tataaactat ataaagaatc aagcaatcat
      421 gtctttcagt gttatctatt gccatcattc cccatgcatt gaggctctca ctatagctat
      481 tactataaaa cgttccctaa gtacataaag gctctaatcg ttaagatttt tattaccagc
      541 cacacataca gagctgcaaa ttgccttgtt tcagatttat tatgtattac tctagaaatt
      601 ctataaagat caaaagaact gattacaatg ttgacctttg cattaactca tctgaattta
      661 aattcaagtg tttgatttgg gaaaataagt ccatttatca taggtctgct actgagggga
      721 ttgtgcagcc ctgattggga gtgctgagac caaatttatt tattgagcat gggcttgaaa
      781 attgtttgta ggacaagagg aacaaaagtt tgacctgcta ttgtattgca cccagggaac
      841 agggtagctg cccttttcaa atatctagca gtctgttctt accaaagagc caaaagatat
      901 ttatagtata aatatatata taactttgaa aatggaagcc aatgagcctt ttctcaccgt
      961 gagataatta agttttaagt acaaatgtta cagtatagca ata
//
LOCUS       KCKM01001586            1018 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25063apa ultra-conserved element locus
            uce-2574, sequence.
ACCESSION   KCKM01001586
VERSION     KCKM01001586.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1018)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1018)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1018
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25063apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1018
                     /note="ultra-conserved element locus uce-2574"
BASE COUNT          328 a          161 c          211 g          318 t
ORIGIN      
        1 ttacttacaa agtattaaag aatagacaaa accaagaaat gtttacactg tagcaaagaa
       61 atacactaaa tacatagatt tgtttttata agccctgagc ggttgtttta agcagctttt
      121 tctgatgact gtggtattgc tagcagtgtg aatgtgctgt gtttgtaaaa tgccagttca
      181 ccagtcccat tgaagtctac tagagaatca gacattattc agttcaaagg aaagttacta
      241 aattgctgaa aaacttaagg cagaaccaga atctgagtat tttactgatt tcttagtagc
      301 ttaaaataaa aatcttagga aatggtgaag gaagaagtac agaatgatgc tgctagatac
      361 ttttttttcc tctggtaact gaaggttaaa tgagtagcaa gcagaatgcc ttaaacaaga
      421 ttggtatatt gattaaaacg ctgatttaac agctcgcttt ctccctttgg aaacctggaa
      481 aagataagcc agctgctgtc taagagtgct gagtgtccac tgagagtaca ctatctatca
      541 tcacaatatg gtgatgagag gtgttttatg tttgtgttaa tttcccccac taaatcagta
      601 attattacaa tcctgtccct gctgtttacc ctgcagctgt ttttccattt gtcgagagag
      661 cgagtgttct cagaggaccg cacacgcttc tatggtgcag aaattgtctc tgccttggac
      721 tatctgcatt ctgggaagat tgtgtaccgt gatctcaagg taaaaaaaaa aaaaaaagta
      781 atcaaatttt tgtgtttgca gggactgttg ggacaaacac aaagtaatta taaagttgcc
      841 ctattcagag ttaatgggga aaaaaaaatc tgtgttcggt ttaaaggtct gagtgtgctg
      901 aaggaagctg tttgatacag tagtcttcag atgtgtacat tacttgactt taacttgatt
      961 ggaaaaggaa acagcatatc acagtaatag cattttgaaa gagttttaaa cttctgat
//
LOCUS       KCKM01001587            1051 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25078apa ultra-conserved element locus
            uce-288, sequence.
ACCESSION   KCKM01001587
VERSION     KCKM01001587.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1051)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1051)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1051
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25078apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1051
                     /note="ultra-conserved element locus uce-288"
BASE COUNT          287 a          229 c          171 g          364 t
ORIGIN      
        1 tactgcttac ctgctctcct tgcaaaatgt gactttttaa acatgcagcc ctgggacttt
       61 gtgcggtcag caaagtgtcc gtgctgagcg atgttccctg ctctctgcat acacattact
      121 taaaatcact gctgtagctc cagtccttcc tgcatttgct agtgagcacc tgcatcgaac
      181 atgtgggatt ctaatcttca ccagctagat ggccttgaat aatttctgtg ggttttatag
      241 gcaattctct ggtgatcaaa ctactgtaaa gagggacctg tgtcaaccta tttttttctt
      301 tttttttcct tctttcaaac atataatcta aggtttccct tgtgggtggc ccttctttct
      361 tttgtgctat tgtaatttct tcataggtgg tacctgacaa gtcctttttt actcttagag
      421 ttttttgttc agattccatt cacttcaaaa tatcattacc attgcaaaca aggaaaatgt
      481 gtttatcaga aactgcaaac tcctttaggg cctcatagga ttaatcacgg ttataaagtt
      541 ttattaaaca caatttttgt ttaatgacaa gctccaccag tccttcccat tccaaaccaa
      601 tcctgtccta agggtgtatc tagcacagca gattgttttc aacagactct caagacaatc
      661 cctattactt tgtcatgcac agagatattt ttcttcctgg ataatttgaa cttccttaaa
      721 aatcacatct gtttcatact ttatttattt gtaatttaaa tccttaaatt gaatctttca
      781 ttactaacat ctgggcttga aaagcagccc acttgaaaaa atacaaattt tattttattt
      841 gtagttaccc cccttcactc agtagcattg gtacaaacat tccctggcca gaggcaaaac
      901 agccgggtat cttaaagctg tgatgccgta ccacgtgtaa tatggctcac ttgaatgtcc
      961 ctgaagtgac tggcaatttg cccagaatta gactgaatgc aagtaataag ctgtagaaat
     1021 tccacaatat tgacaattag atatctctat a
//
LOCUS       KCKM01001588             961 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25094apa ultra-conserved element locus
            uce-222, sequence.
ACCESSION   KCKM01001588
VERSION     KCKM01001588.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 961)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 961)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..961
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25094apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>961
                     /note="ultra-conserved element locus uce-222"
BASE COUNT          288 a          170 c          205 g          298 t
ORIGIN      
        1 tttattaata tatctgcgta tctgccctgg cgatgtttca ggtgagcctc gactcttaag
       61 taaaatcaag gccgctaatt gtatcccgtg gttaaattaa agccatgata tccgttccta
      121 agacctgcaa taatcagata tgcaagctgt tggtttgtat gtcctattga tttaatatgc
      181 ttctaatcag tacataaagc tataggcctg cagtgttaat ttttcatatg cttacaaagt
      241 accctttgat tttctgtcac gcgttaatta cagcgttttg ccattaaata ggaagctttg
      301 tgtaaactaa ttactaggta atcattgtct accgcaagcg tgctgtttgt accttttatt
      361 ttattctaaa aatgcacaga tctcgcagtc tggaaccact ataccttcca gccattagct
      421 ctcactaatt catagcatta ttgtgttaag attgtaggag ttgtaattgt tgtggtatca
      481 gtgctgttaa ttaccggagt aaacagttga aatggtgcca aggtctattg tacaaggcag
      541 aggaaaggag gtttaaatgt tacttccacc atctggggac tggaggagag gcaaatgcta
      601 gaaaacagca gtgaggcaat atccgaactt cagctccagg gtttgaggcc atatggatcc
      661 agaatatttt gaatcaattg aatttaagtg ccagtttgta gcaataacag cctggaagga
      721 gaagataaag caagagcact gaagaaatct gaaatccgtt aatgttatcg catccaataa
      781 agaggctgct tggattattt taaaaatgtt tgttttgctg aaatccaaaa agtaacaccc
      841 aggcaactcg aagaataaaa ggagtttaac tgtgtgttgt tggcgaaata caatgcaggt
      901 tttgtctgac agttccgtta gcgctgcagc tcagcaattc cgataaaatt cctgggaagt
      961 g
//
LOCUS       KCKM01001589             399 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25110apa ultra-conserved element locus
            uce-4359, sequence.
ACCESSION   KCKM01001589
VERSION     KCKM01001589.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 399)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 399)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25110apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>399
                     /note="ultra-conserved element locus uce-4359"
BASE COUNT          120 a           59 c           87 g          133 t
ORIGIN      
        1 aaaaccacat gagttttttt ctaagcacca aactcttgat ggatgctggg tttgtaggag
       61 ctgtaaatgt aaattgtttt tcctctggcc acttgtgttt tatttgaaac gtacaaagtc
      121 tgagtgtgta gttcctgaga gctggcctag agaacagcag cactcccaag tagtttgtct
      181 cctatcaaac ggcattaata atttagtctc taattaaaag tgaggtcaaa caatgaaaaa
      241 tgactgagct aaatggttac gctgtgatgt attaaagtga ctggtggttt ttaatggatg
      301 gaaggagtat tgttgtttgt ttatgtacaa aacactttca gtcaaagact gtaggagtcc
      361 tgaggaaatg tatttaacta aaatctttta caggttact
//
LOCUS       KCKM01001590             857 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25126apa ultra-conserved element locus
            uce-1329, sequence.
ACCESSION   KCKM01001590
VERSION     KCKM01001590.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 857)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 857)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..857
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25126apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>857
                     /note="ultra-conserved element locus uce-1329"
BASE COUNT          288 a          159 c          132 g          278 t
ORIGIN      
        1 aattacttct atgagtacgt ttggatattt tatcattaac tcactgagtc tgctgtattt
       61 gtactgaaag catattctga aaactgaact ccactgctaa tgtttttatt tgaataaatt
      121 attacccaac tcagcaacca ttaacatttt ccagaacaag aacatggatt tctgtaattt
      181 ctctggccct aatgccagtc actattggga gcatttagtt ataaattgtc tttcaataaa
      241 agtaaaagct cccaaaacaa caaaatgaaa agacacagca gcttaaatca aggaagtcaa
      301 tttccacatg ccgatcctaa atatttcata gccctatttt attctgacat ttgtagatga
      361 ctaaagtgtt acaaaggaaa taaaatgctg attaaagagt tcactgtcat aaaggttact
      421 gaattgtaaa tggccctttc catcttcctg ttaataggta cccagctgta aacatcatga
      481 aggatgtgac gggaggcctg tgctgctcct ttaggagtcg tatatacatt aatcactgaa
      541 tcaccaagcc atgcttaatt gcaagttgta tatcacacaa atccatggta agtagaagga
      601 aactcattat tgctgcttca taactactgg gtacttctca ttttaacctt ctcacacctg
      661 ggacactgtt gttttacaat gtgaatgcag aaaaggcatt aagtcactaa ttatagtaac
      721 acggtatgtt atcctgctgt ttcaacattt ttcaaaataa aactactaac aacaacagag
      781 caagattttt tttttacact agttaagtaa attttagagt attttttcat agagtatagc
      841 acacagaaat ccattat
//
LOCUS       KCKM01001591             336 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25142apa ultra-conserved element locus
            uce-2331, sequence.
ACCESSION   KCKM01001591
VERSION     KCKM01001591.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 336)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 336)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25142apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>336
                     /note="ultra-conserved element locus uce-2331"
BASE COUNT          135 a           59 c           50 g           92 t
ORIGIN      
        1 ataaatttca tctattgaac attagctaaa aaaattacat gtgtttatca tctggattat
       61 tctcagatta atagagataa atgacaaaac ataatcagca ccaactctgc aacttaatca
      121 ttgcatctga gctataggaa acacttaatt actctcattt actaggtgca atctaatgag
      181 aagacattag ccaaatgaaa agaatgcagt acaaacaaac aaaatagtta taccatcatt
      241 aaaaagaaac tctgacagtg caggtgacag catatgcagg ataaattacc ataatgtcct
      301 aaatgctgag ctgtcagcat gctaatgcag tgatca
//
LOCUS       KCKM01001592             689 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25156apa ultra-conserved element locus
            uce-6812, sequence.
ACCESSION   KCKM01001592
VERSION     KCKM01001592.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 689)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 689)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..689
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25156apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>689
                     /note="ultra-conserved element locus uce-6812"
BASE COUNT          205 a          117 c          130 g          237 t
ORIGIN      
        1 gggagtcctg gtttgtgttt gctatgctct gtagaggcag aggcaatgtt tgctaatgtt
       61 gcattgtcaa ggaaaaatgt ttagtctgca ctgtccttta gggagggctg tttctgagtg
      121 tcaccatctg tgttatgtga ggatatttca agatgacatt ccttctgcaa ggagaaaaac
      181 ctcttttgaa gtcataaagt gttaactttt tgaaatcttt ttccagtagc ctttcatata
      241 tcttacttat ttaaactcac tttgatggta ttggaaacac atttgcaggt aaattacata
      301 catagtcctt ttattggata ttgattgtac tgccttgcat tccaaggcag acttaattca
      361 acaattccct aattagttaa agtcataacc tatgtcttgt attcatttac cattaattaa
      421 accttagctg tttattacac tgcagtccaa atccaatagc agacccatag agccatggaa
      481 aagggaatgg gaggtcaata tcgaaaatat atggtgcgaa gtcccactga tggctgcatt
      541 gttcacaatc aatatggtca atgcaacaca actttcttag ttgctatgtc agcaagacaa
      601 aaagtcaatt ctaatgttat gctagtaaaa aaatggcgat tattgaaaaa ctttgactct
      661 tgctatgaaa tggtattttt cttaagttt
//
LOCUS       KCKM01001593             942 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25172apa ultra-conserved element locus
            uce-3340, sequence.
ACCESSION   KCKM01001593
VERSION     KCKM01001593.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 942)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 942)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..942
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25172apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>942
                     /note="ultra-conserved element locus uce-3340"
BASE COUNT          319 a          215 c          153 g          255 t
ORIGIN      
        1 tgtccactac acaggaaaca gcatttaaaa aaaaccaaaa taaaaaaaaa tgagaagtta
       61 ctgaaaagaa atgaccaatc aaaacattat ggacagcaga actacaaata tttacgaagc
      121 aagagtcttc ttctaggaca agaattgtat tttaacaata aaacagtaac gtgatcatca
      181 ctatgaaagg tgcagtcctg ctcccagctg gttaacgaca ttggctgaag ttctatgcaa
      241 gctcgtcatc attctttaga atgcggtttg ccactccaca ccagttaacc ttacattata
      301 tcactaaata aaatgctgtt cctcaaccca tgcttactta tttctggtac acaaaacaca
      361 cctcatcttc ttcatcagtg ctctttcctg atggcacatt agaagtattt tttgtgtcct
      421 cccctaaagc agaagcatca ccattagaag ccagggttcc ttgttccgct tcccattcct
      481 gcaatacctc ctctaagtta aaccgacgcc tgtagtttac aaagaagttc ttcacttggc
      541 caacagtctt gttgccaatt acatctgcaa tagcttgaaa atctttacca tattttcgga
      601 cacctggaag gcaaagtaaa taacatagct gtgaagaatc agtcagacac agctacgtgt
      661 gatgtattta tagagaacct atgggacctg caaaccaagg acttgctaat taggaagact
      721 tctcaattag gaggagtcct tcatttccat taaaacaaag taatttttaa ttgcacagct
      781 atcaacatac aaatcaagaa ctttaataaa aggtcattac ccactgttct taaagatcct
      841 ggcttactca ccaaacctcc caacctaaaa ccgcagagat ctggcctctg acagataaag
      901 taaatcctcc agtgtgtgtg cagtagggat agaagcccaa ga
//
LOCUS       KCKM01001594             954 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25188apa ultra-conserved element locus
            uce-2742, sequence.
ACCESSION   KCKM01001594
VERSION     KCKM01001594.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 954)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 954)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..954
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25188apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>954
                     /note="ultra-conserved element locus uce-2742"
BASE COUNT          327 a          181 c          200 g          246 t
ORIGIN      
        1 gagaggatgc tcccacctgc atgcagctag gaaggggagg aagaggtgag ctctaaaggc
       61 agtacagcaa ttcaggagaa caaaacgcgg tgacaccgcc cgaaaacaag gcagagctaa
      121 aaggtggatg ggagagtgag ttttgaggtg tccggggaca ggtgggggga gcttctcgtg
      181 catcaccagc tgctccctgc atggctctcc ctgatttacc gtgcgagaca aggtagtatg
      241 acaaggccat tcatgtgctg tcatccaata aaagagattt ttcaagcaat acgagatctt
      301 aaactgttca cggatagcag aactagcatt agaatgctaa acaggaaaaa cgaaacctat
      361 catatttcat aacgtatgtc ataatgaaca aaaagccttt caaaaaaaaa agaaaaaaaa
      421 cgaaacggtt ttcactgtgc taaagtaaca atctagactt gttgtaagta tgttattctt
      481 acaagtagtt cgcagttatt cttgaaggca agtcttggag tttccttagc atagtgctgc
      541 tggggaaaat tttcagcatg tccatcttca tctctagcct gaagggaaat ataatggcct
      601 atttagggac ttacaaataa tggaaggaaa aaaatagcta aaagcataac agctcagatc
      661 attaaaacag acgggaatcc caaaatacaa cattatttaa aactttcttt aaatacgcag
      721 tacacctttg agatatgaga acttgggatc ctgttttctt acatagctta ggttgaacat
      781 gcaaattcat tctggtgtaa taattagaac aacaaaagac aaacccaaaa tgaaatcttt
      841 tagctggaaa ctcaaatacc ctggaaaccc tgagtaactc agggtttttt accccattgc
      901 atttttcagg attacattac atacgtactc gtttaaacct tctgacatgc ttaa
//
LOCUS       KCKM01001595             265 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25204apa ultra-conserved element locus
            uce-7442, sequence.
ACCESSION   KCKM01001595
VERSION     KCKM01001595.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 265)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 265)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25204apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>265
                     /note="ultra-conserved element locus uce-7442"
BASE COUNT           87 a           55 c           71 g           52 t
ORIGIN      
        1 gaaaaacaga ccatgtaatc aggtctaagg ggtccttaat accagagacg ctggtgctgt
       61 cagctataga aaataattag aacgttatcc ctgtggcaag gagaatgtaa atacatctaa
      121 aatacgacat aatgacattc tcctctgtaa gctaggggat ctgcttcaaa taaaagggcc
      181 attaacacaa caattaaagc cgagggggcc ggtgaagtag ggagccggcc tggtgcaggg
      241 cgaggcgagc aagcgccccg cgtaa
//
LOCUS       KCKM01001596             263 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25220apa ultra-conserved element locus
            uce-7689, sequence.
ACCESSION   KCKM01001596
VERSION     KCKM01001596.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 263)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 263)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25220apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>263
                     /note="ultra-conserved element locus uce-7689"
BASE COUNT           97 a           33 c           62 g           71 t
ORIGIN      
        1 ttaattatta gtatagtggc gtgaaaagct gttgagcccc ttagaaacgt acatggccaa
       61 ttatcaaaaa atataagaga tgcagaaaga aaggtttgtc taataagtat gaatcgcagg
      121 gccatttaga acatcagtgt taaagcatta gagttaaatg gaaaagtaaa aaggggctga
      181 tggttttaac tatttcacag gaggacaaga ggttgatact gataagacaa gcagtatagt
      241 gaagttaatt atctgcggcc ctt
//
LOCUS       KCKM01001597             836 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25236apa ultra-conserved element locus
            uce-5951, sequence.
ACCESSION   KCKM01001597
VERSION     KCKM01001597.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 836)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 836)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..836
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25236apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>836
                     /note="ultra-conserved element locus uce-5951"
BASE COUNT          297 a          153 c          145 g          241 t
ORIGIN      
        1 tatcaaattc caggctcata agcttttgca cactgaattt aactatctgt catgcctccg
       61 aggttacagc gcagacctaa aaggaggtat ggtgtaagat caatgttaag gaaagagttt
      121 catttaaaag accatctttt cccatcagac atgataggag atttattatt ccaatattat
      181 tgttgaaact agaagagaga aaaaaaataa acaggaacat atattttcat tttatgactg
      241 cgaacaacat ttgatactgt aaacatatct tggtctataa catttaccga gtataatttc
      301 aatacagtcc ttactgctag ctcggcagag cctccccaga acattgtgtt aatgattaat
      361 atgaagtcag tggaattcca cagttgctga gagtcttgtg cccaagaatg aactgcattg
      421 ctaaatcagc aaagacagtt gtcaaggtaa cctctatgta atctatttaa ctggctccca
      481 aaacaccaat caaggtcaga taacgcactc aagcaccata tgaacacact catacggcat
      541 aaagctttgt atcaagacag cagggaggaa aaaacctcat taggaagtag acggaaaaaa
      601 aataaattca gttttgagaa gtgttaattg ggattgcagt tagctttgtg gggaaagcat
      661 gccgttcatc tgaatgtgtt ttatctgtag tagaagtaat ttcactccag ttcagtttga
      721 atggaaatat ctttctacta gtgtttaaaa aaccccacaa aacaacaaac caacccaccc
      781 caaaagtaaa accagccaaa tataaattat taatttcatt tattgtttta ttaatg
//
LOCUS       KCKM01001598             558 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25252apa ultra-conserved element locus
            uce-6538, sequence.
ACCESSION   KCKM01001598
VERSION     KCKM01001598.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 558)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 558)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25252apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>558
                     /note="ultra-conserved element locus uce-6538"
BASE COUNT          223 a           84 c          102 g          149 t
ORIGIN      
        1 taattaacat aacctcatca gacttggtat tttctggaat ttacaggagc tggatgtctt
       61 aagaaacacc gactggagac aaagacgtaa ggattgcttt attgagagag aggaagaaaa
      121 atattgtata cagctataag gtgaagaaaa acttggatta gaagatggat ttagtgggtt
      181 aagaagtcac agaactttga caaagcacaa cttcactaat acaaataaga accctgagct
      241 gcatttgaat tcacatcaca ccacacctgg taagaattag tctagcacag catcatcaat
      301 catagtgtgg ttgtcagttt tgacatcctt taagtctacg ttgtgtgctt aatgactaca
      361 ttacagaaaa tgtaaacaga caccaaacac acaggtatgc cctatatttt tttaaaagtt
      421 gctgtatatt taaaaataat aataaagaat caccagcagt gttttgtata gacagtgaag
      481 aagtgaactg taaagcaagc tgttataaaa taaccagaga aaaactttgt aaaaacaaga
      541 taaaaataaa agaaaaaa
//
LOCUS       KCKM01001599             731 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25268apa ultra-conserved element locus
            uce-7706, sequence.
ACCESSION   KCKM01001599
VERSION     KCKM01001599.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 731)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 731)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..731
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25268apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>731
                     /note="ultra-conserved element locus uce-7706"
BASE COUNT          210 a          128 c          123 g          270 t
ORIGIN      
        1 tagacctccc ttccaaccgc cgaaattgat gatgctatga ttaataaaca ttagctgttt
       61 gttaatctgc acagaattag tctaacaaca gctgaggaat tactttggtt ctaaaatttt
      121 ggagcatctt ttgtgcttga tttaaaagtt caagtggtat tttcattttt agttgaatca
      181 ttatttttct acattgcttc cttttaacgc atttttctca gagaaaaaaa tattatttct
      241 caaattgctc tattgctttt tatgtttact gttactataa aattacggta cacaaataat
      301 ctaatgtatg catattttta tgcttttgaa tagaagtggg gtcctctctc ctgagacatc
      361 catctcctga actttctcgg ttaatctccg cccacagctc tctttccaaa ggagagagaa
      421 atttccagtg gccagtattg gcatttgtaa tccagcatca tgatctggaa ggacttgaaa
      481 tagcaatgaa acaagcccta cggaaatctg cttgcagagt ctttgccatg gaggtattaa
      541 tttactaatg ggtcttgtac gattaaaata agacgtttgt aaatttgtag gaagtatctg
      601 gtgaaagaat attacaaggc tccagaaatc aattgtgcaa atactgtttt ctcctcattt
      661 gttcagcatc tttctggtat tacttgacgt ttctttttaa aatcttgtac tgagtattat
      721 ttcttcagaa t
//
LOCUS       KCKM01001600            1113 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25282apa ultra-conserved element locus
            uce-1169, sequence.
ACCESSION   KCKM01001600
VERSION     KCKM01001600.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1113)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1113)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1113
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25282apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1113
                     /note="ultra-conserved element locus uce-1169"
BASE COUNT          355 a          203 c          201 g          354 t
ORIGIN      
        1 ccccccctac atgtttagca gatagtttgg cagcattgag caaaaattag caaattttga
       61 gagggcctgg ggctaaacag cccttgtaca gcacgactga ggtaggcaac agtagcttta
      121 ctctactggt gccaggactg ttgctccttt ccagatttta aaaacagtat ttgaacgcta
      181 tttacatatt gatatgttgt gactgctaat attccagcaa tgacgttagc ctaggcacac
      241 actattagca ttttgaagat gatttgtgaa atacttaaga atgaatttac tgtatcatta
      301 aaaaaaaatt attattgtct ttttgaggag ttttcttctc ctgttcaatt caaaatgttt
      361 ctgccaagtt aaaaaaaagc ctttagattt aggatgattt gggaaaacag caagtttttg
      421 tgtttgggat ttggtcatgg gttttttttt taaactgtga aaagtctgag cattaactga
      481 tctagatttg actgggtact cactctgtcg cacagctctt caaatgtgaa gtctgcaatg
      541 gttccacacg ctttattcag cctcagctct ctgccttgca cttttagaat ccttggtcta
      601 gttactatgg gaacatgaac aaagactcaa tcttctctgg ataattacta taaaattcat
      661 ctcttacaga taggaaatgc atagcttgat gaataatagc acatgattca acacataaat
      721 tagacaaaat gctgatacaa tgactgccac ttgagtgtgg catcaaccca tatacagcaa
      781 tggaacttat taattggtca gtggagattg ggcattgtgt tctaaatgta ttctttttca
      841 agagaaatta acttacgtac aatcattttg tttctgagcc agctcatcaa acaacttatc
      901 catgacagcc tccacatcag cttcacttgt gctacagtga aaagaataat agaatatgaa
      961 attaataaca cttgaagcca acatcaaaca gctgcctgag cctgcttagc tttttgccca
     1021 taaaaaagag aacaggatgt tatgctctaa atacaaacat tagatttaga atacacttaa
     1081 aagtagagaa tattaactct caggtagatg att
//
LOCUS       KCKM01001601             369 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25297apa ultra-conserved element locus
            uce-5295, sequence.
ACCESSION   KCKM01001601
VERSION     KCKM01001601.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 369)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 369)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25297apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>369
                     /note="ultra-conserved element locus uce-5295"
BASE COUNT          130 a           50 c           85 g          104 t
ORIGIN      
        1 aattcaaagt gagaggttga gggtaggggg cttatgcttc ccattttgct tttaaggtca
       61 cagtgaaagc ttgtgattga atatttttca tggaactgcc taagacaaag acaggggttt
      121 gtcagagtgc tgtgaaaaga gagggagaga aagatctgtg ttagattttt aaggtatatt
      181 tgaaagaatg aaataaaaaa aaatgctttc aaatcctgag ggactttcca atttatcaag
      241 aaagacacat tcttcctaat gaaaggttac tgaccttcat gaatgtgaca gttcaattac
      301 agcccattca tatgcagagc agccgttgat aaaggattta ggaaatgtga ctagcatagc
      361 aaaaaaaaa
//
LOCUS       KCKM01001602             876 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25312apa ultra-conserved element locus
            uce-3746, sequence.
ACCESSION   KCKM01001602
VERSION     KCKM01001602.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 876)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 876)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..876
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25312apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>876
                     /note="ultra-conserved element locus uce-3746"
BASE COUNT          262 a          148 c          154 g          312 t
ORIGIN      
        1 acacctttac tggaactata gactctttag tggtgaattt aagtatgaca atgaacttgc
       61 agattattga catggtgtat ttcttattct aggttctatc cttaggggct gatgttctac
      121 cagagtataa actccagaca cctcgcatca acaagtttac tatattgcac tatagtcctt
      181 tcaaagccgt ctgggactgg ctcattttgt tgctggtaat atacacggcc atattcaccc
      241 cttactctgc tgccttcctt ctgaatgaca gtgaggaacg gaagaggaga gagtgtggat
      301 attcttgcag cccactgaat gttgtagact taattgtgga tattatgttt atcattgaca
      361 ttctaataaa cttcagaaca acatatgtaa accagaatga agaagtggta agtgacccag
      421 caaaaatagc aattcactac ttcaaaggct ggttcctaat tgacatggtt gctgcaatac
      481 cttttgacct gctgattttt ggctctggct ctgaagaggt aagcttaaat aaataagaaa
      541 ccttaaatct tgagttttaa tttttctgtt tatcctaatc tattttttgc ttgtcaatta
      601 ataggctatt tagtaattct gccccatttt ttaagttaaa ctaaaattaa tcttccttag
      661 tagaatgatg tagagtatta gctttcactg acagaacaag ttgaatgatt cagctagtat
      721 ttttcaatta taccatattt gatactgctt ttaacaaata aagaaataaa tatactgtat
      781 atgaaggatt tattcaaatg cttttattta agaacttctc tttcgatttg ctgcttgttt
      841 ggtaaaaact cacagtgctt ataagtattg tgttgg
//
LOCUS       KCKM01001603             305 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25340apa ultra-conserved element locus
            uce-3504, sequence.
ACCESSION   KCKM01001603
VERSION     KCKM01001603.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 305)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 305)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25340apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>305
                     /note="ultra-conserved element locus uce-3504"
BASE COUNT          113 a           47 c           47 g           98 t
ORIGIN      
        1 gaaaagaaag atgaattctt ctgctaaacc agggtaaccc taaaagcgtg ttaacatgaa
       61 atactaaata aaatgctact catctataat aaatcttatt acacattttg gcaattttac
      121 tactaacaca ccgaaggttt caagcaatgt ttgaaaatag aaatcttaaa ttgaatcatt
      181 gttgcatgaa tatatgcaaa atattcattt ctagcactgt gagggttgag tgcttttaaa
      241 ttggagaaat cactcatgac ttcacctttt catgcaagat aaagttgtat gtggtaacat
      301 catta
//
LOCUS       KCKM01001604             837 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25356apa ultra-conserved element locus
            uce-5445, sequence.
ACCESSION   KCKM01001604
VERSION     KCKM01001604.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 837)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 837)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..837
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25356apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>837
                     /note="ultra-conserved element locus uce-5445"
BASE COUNT          317 a          152 c          131 g          237 t
ORIGIN      
        1 tacctgtact gtgttacact tgtttttttc aaacttacaa gagacaaaac acctctactt
       61 aaattatggg ttttttagta actcgcatat ttcatccacc agcatgacag ccttcatcag
      121 ctaaatacga aaacagggcc cacaaattct aattcatagt gcaaataatt acagcactta
      181 tgattcaccc cataacatgg aatgtgattt ctatcactgt aaacactgta gtttaaattt
      241 aaaacaacaa agcagctttt agattattgt tttccaagaa atgtaaagga cagaattaac
      301 tcaacattaa tgctttagaa ataataagtc taatttttaa gcgtgttgaa gcaaatggat
      361 acttttgcac tgatgtgagt aattaaagtc caagagcttc acagactcag agatgtaatg
      421 cagccctttt atcaaaagca gtcactctat ctcggcctga cagttaacag catatgatct
      481 agtaaacaaa tactttcaca cagtacaaaa gtgccattaa aggccagaac tgtcaacaca
      541 aattccattc ttacaagaga aaaaaaatct ataaactgtt gatcacctct ggttgcctta
      601 actagcatgg aggttgtcat ggaaacattt ctgcgaagtt cacagtgatg aaacacaaac
      661 acttccagct taattgctat taggtttagc ataccagagt ttatttatac tcaaagagca
      721 ttatgataaa atgcagtaga aagtaaagcc agtaatgatc tggcataaca aagccaacag
      781 atttaaaaaa tgaaagaaag aaagaaagga aaataaagtc aaagaagaag acttttt
//
LOCUS       KCKM01001605            1165 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25370apa ultra-conserved element locus
            uce-8009, sequence.
ACCESSION   KCKM01001605
VERSION     KCKM01001605.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1165)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1165)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1165
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25370apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1165
                     /note="ultra-conserved element locus uce-8009"
BASE COUNT          306 a          290 c          241 g          328 t
ORIGIN      
        1 ctctagcact gtacaatttc attttgcgct gctctagacc aactctgttt ccttgtgtac
       61 ttcagatggc acaagctgca acaggatgag ggatggagag ctctgctttg ctccttttct
      121 ttcactcttt caagctcagg gttactcatg agctcatgcc cagacagagt aaagggttaa
      181 gcatgaagat ctggaagaga ctgtgctgtg ctgacacagt gctgcccttt tgcctcttcc
      241 tcgcacatac agactgttca catagcctgc attcctcccc agttaacact attaagcttt
      301 gacctgaact agagagagag ctaaatatgt gtgcacctgt cctcttctaa tgacctgcta
      361 ttatcatttt ccacccctct tttttgattg atggatattt tatgcataat gaccctgagg
      421 atttcccccc ttctttttgt taggctttgc taaagcaacc tgcaaattaa tttaatatcc
      481 tcttttggtt aggagctatg aaacgagggc tcgaggctga tgatgcgtaa accatttgtg
      541 gcatgtattt aatctccgga caatggatag agatgttagt gcatgctaca ctaagttcta
      601 tttacgctgg ctattaagtg cagtcaagct gaaggcaatc ggagcacatt acagggccta
      661 atgggagagg atgctacaca acagtacatt aaagactgaa aatgaattaa gaaggaagca
      721 tggtagagaa agcagacaag gaaaggcttc tgtatacaga taactcttat tgacagtgca
      781 aatattcatg tactctgagt tcccaaatcc aattttggta ttggatacca ctctagaggg
      841 aatgttttga attccatttt catgcagata caaaatgact tgcagtcagc ctgccccctc
      901 ccacctccat ctcagcagct tgcataaccc catgctggga aacgcatcct caacagctac
      961 cttccaaagc tccgccggat tgctcctgac cacctaaatc aggccagact ttcctagcgt
     1021 gctccctgaa gtgcacctgg ccccaggaat tacaaacaca ccttgctgcg ctccccgtcc
     1081 ccttcactct ccttggcact tcctgctctg gctcttgcac aggtgagaaa tttcaacctt
     1141 gggaagggtg ggagaaaaac gcaca
//
LOCUS       KCKM01001606             966 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25386apa ultra-conserved element locus
            uce-390, sequence.
ACCESSION   KCKM01001606
VERSION     KCKM01001606.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 966)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 966)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..966
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25386apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>966
                     /note="ultra-conserved element locus uce-390"
BASE COUNT          304 a          201 c          174 g          287 t
ORIGIN      
        1 aaagagaatc aaaatccaaa aaatcaacca acagtacagt tttactactt caaaagaaac
       61 aactggaggt acgatgatca agaagtaaaa aactggagta accaaggggt taaagataca
      121 gtttacactg gggagttctc tataatatgc tcccccttcc ctagcagtgc tgccaaaaaa
      181 catctgacag gaaacataag attaagtttg tcctacctaa gtgaacaaag agtgctcaga
      241 acaggcaacc agttcactgc agagcaggaa cttttctaat cctgctggaa tctgcagtgc
      301 tgctcagaaa atattaccaa agttgttttc tctactttaa catcttgctt ctggatcatc
      361 tcactcattt cagtcacact gcagttcttg ctgcttctcc tataaaagtt aacttaaagc
      421 tccaaacata atcatgtgga aaatggacat tattgattcc tatggtccat tgttccccca
      481 ttctaagtcc ctgaagttca agttcaatct ggaattacat catgtctggt ttctcctggt
      541 taccagacgg cttgagacgt gaccacagct acagaaaaaa caaacagcct tcttcacgct
      601 tcagctcccc tatcgataca aacataaact ttttttcttt ctctcaagta tgcttcaagt
      661 atggagcatg gttaatttag agattaagtt ccaaattaga ttatctaatg gcatcttaat
      721 ggattgctga cccatttcct gtgggatggc agcatgcaag tctggcttga atacaattaa
      781 tttcttagga agtgttctga agatgtttgc ctagatggag aggaaacaac attctgcaca
      841 tctttctgca ttacggagtt gggaaaaact gttagactta actattagag ttagccctga
      901 taaagatcag aaatcattag gatttctttc cgtgaatact tttacagtca ggatacttcc
      961 atggtt
//
LOCUS       KCKM01001607             846 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25401apa ultra-conserved element locus
            uce-3178, sequence.
ACCESSION   KCKM01001607
VERSION     KCKM01001607.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 846)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 846)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..846
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25401apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>846
                     /note="ultra-conserved element locus uce-3178"
BASE COUNT          259 a          211 c          140 g          236 t
ORIGIN      
        1 gcagaccttt tatttagatc tgcaaaaaat ttgcaagttt gttatttcat caaagaaatc
       61 taatccacct attgtcttct gatctttctc gtaagatcct tccatatgaa taaaactgct
      121 tttaaaagca ccatccctcc ccaccccacc ccccagcatt tcctgccctc tcaccttaaa
      181 aaacagctct gagaactttt tgaccaaagc agccatgtgg agccagaatt gtttcagttt
      241 tatacagggc ctttgctcac atcctgtcgg gtgttaaaaa tccctcagct gctttgctag
      301 gaccacccgg ctagttctga accacatctg acaaaatgat actgttcact tccagaaccc
      361 atcacacagt tattcttgga taaaaggtaa agcaaatagc agccaactgc tcactgctgc
      421 agaaacaaag accatctagc catttatcaa agcttcagac aaccagcttg ctttaagctc
      481 agccacctct cccattacag ctttaaacga taacacgcta taatatcaga aatgacaaat
      541 ggaaccgggg gcctaaccta tacacaatca atacctgcac tgaaataaga accatcttta
      601 aagtattgac aaagggagca ggaatacata taaaactgca attttttctt gaattgtttg
      661 gtatggccac tgtcaacatt catttgtcca tgacattctt tttttttttc aggagagcag
      721 caaaacccca gggtgtgcaa ctattgtcaa gccattatag tcaccccatg tctattgttt
      781 attgcagggt aagaggaaag ggccgattac aagtgacttc agcagagcct tccgctgcag
      841 attaga
//
LOCUS       KCKM01001608             388 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25416apa ultra-conserved element locus
            uce-5861, sequence.
ACCESSION   KCKM01001608
VERSION     KCKM01001608.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 388)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 388)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25416apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>388
                     /note="ultra-conserved element locus uce-5861"
BASE COUNT          121 a           76 c          109 g           82 t
ORIGIN      
        1 gctttgaatg gcaattagga agaggttaac caagtgcctt tctcccagga atccgcttcc
       61 tccgttcaaa ataacagcgt tagcaaaaga aaatcccaga ttagactaac aggtaggagc
      121 gtggtgcagc cctgggagat gctgttggaa gtggggagat tgggagaatc atcccagcgg
      181 gagactaata ctcatcattc ggagctgcag ctgaggccca tttgagtgac aggcagccgg
      241 gagctgaaag agccgctcat atcccacaac tgctggcacg cagacttgaa agagatttat
      301 ttcaggataa ttagctggga gtattaaagg tggcaggaaa gatctgcaat tactgtttag
      361 caaacagaat ggaagcaaag gaagagaa
//
LOCUS       KCKM01001609             487 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25432apa ultra-conserved element locus
            uce-6769, sequence.
ACCESSION   KCKM01001609
VERSION     KCKM01001609.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 487)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 487)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25432apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>487
                     /note="ultra-conserved element locus uce-6769"
BASE COUNT          142 a           89 c           94 g          162 t
ORIGIN      
        1 ctgcctgcag ccattaccag tcagcttgac aaggcatcca tcatccgact tacaattagc
       61 tacctgaaaa tgagggactt tgctaatcaa ggtgatcctc cgtggaactt gagaatggaa
      121 ggacctccac ctaatacatc agtaaaaggt atggagtgta cagtatcgaa tatggcagcc
      181 tttagtaacc tctgaattga aatttttacc atcatccttt cttctttccc tgcatatcaa
      241 atcctttaaa gggatacaaa tgtggaaatc tgaggtctgc atgagaaaga caccatgtga
      301 aggtgaaata aacctcttat tttatttatt ttttatttaa caacaaacct tttgatgtaa
      361 ctgttacagc tgaaagtctt ctgggtgaca tagactaaat tgtttacagt tatttagcag
      421 ttgttgtgtt gctttgtttt ggtattttat ataagggtgc atatgaggca tggcattatt
      481 ccttgat
//
LOCUS       KCKM01001610             940 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25447apa ultra-conserved element locus
            uce-2063, sequence.
ACCESSION   KCKM01001610
VERSION     KCKM01001610.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 940)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 940)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..940
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25447apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>940
                     /note="ultra-conserved element locus uce-2063"
BASE COUNT          264 a          234 c          166 g          276 t
ORIGIN      
        1 tcaaatagat tttacataca tataatctag agacacaata caaaaatctg tataagttag
       61 gcaatgcatc acaggagtaa acaaaaactc aacacattta ccttggcaaa atgacagaat
      121 ctatttctgc tggctgaaaa tattagcttt taatgcattt attaatttca ctaaacgtac
      181 gtgaaatgtt cttccttagc ggtattcatt attccttttt gtgtttcata gttactctta
      241 tttatttttt ccattttgtt tttacaccaa ggagactgca gtcaaataac actcagcaac
      301 tcatttcctc tctttggact gaaaaattaa acagatacta aattatgaca gtgaatttag
      361 aaaggagggc tccaagggct cgaaagaaca tgtctgagat aatatgatgc ttctaagaat
      421 attgcaatca catccaagca atcaccgaag cgtgccatgt aactacctcc tcagctaata
      481 tgcttttttc tccgtgatga ctaatcatgt tctattaaac agcggtaatg ctggaagaac
      541 tcaactatac aagtgtaatg aagccagtat tctccccgga cagattagct acaactgatt
      601 tgacacatac catcatagga gcttcaaacc tgacaaactc tgtgcttgct tctgatttat
      661 gccgtcaagc tcttcagaga agagaatgaa atccaggcgt cgcgtttggt agaggtgaaa
      721 tgtactgatg tgcttaactg tcagttacgg aaagtcacca tctctccttc cttctcctct
      781 cgctcgtctc tccctccgcc ccttccctcc acgctcaggg agcctgcgtg tccccccctg
      841 gggacgaccg ctctcccatg gtcccagtgc cacgcgcggc gtgtcccgct caacccacgc
      901 gctctcgccc gctcatttcc atcgttcgag agctgtcact
//
LOCUS       KCKM01001611             877 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25462apa ultra-conserved element locus
            uce-4842, sequence.
ACCESSION   KCKM01001611
VERSION     KCKM01001611.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 877)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 877)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..877
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25462apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>877
                     /note="ultra-conserved element locus uce-4842"
BASE COUNT          246 a          201 c          199 g          231 t
ORIGIN      
        1 aggagtgctg tgagactggt ggccaggaca aactccacat ctggaggaac cagcctgtga
       61 cagccccagc ctgtagaaag taagatgctg ctgctaccca agtgcatctc cttgtctagt
      121 ccccctcctg gctccatctc atcttgggat gctcaggtca tgctcctgac atggctctct
      181 cccttctcag tgaccccaga ccagcatccc actctcccaa ctccatcccc tccacagcaa
      241 ctggggcgct gctggtccca ccagcatgca gggacgaggc agcagctggt cctgcagcca
      301 cttgaccaga gatgctggtt gaagcaggac cgagatgggg agggggaaga gctgaggatc
      361 cctttgaggc agtcacctgg gactggcagc acttctacta atgcacagtg aacagctaaa
      421 tcatacatta ttgatttgtc agacgtattt gcatataaat aagcatgatc attcatacaa
      481 accttaatgt tgttgttctc cctttagtgt tgtgatcaca gatgaatgac tctagttaga
      541 cacaattcag gaaagcttgt accgctgcag caaagtaagc tgctgattta aaactacatt
      601 tattggagca tataagtgtg acagtctatt ggtgaatttg gggataatta gtctaaaaga
      661 caagataaat gaatcctgaa agtgatattg tgatgaagaa atgatccctc catgctagta
      721 aagctttgat gccagaaata ttgtaaatga taattaactg ggaaacacag aggaattata
      781 tttcaattgt gttttcaaaa ggacttagaa ttttacagac aaattgattg ggttgtcccc
      841 ctcccccagc cctgtgatta tgaaagattg tctaatt
//
LOCUS       KCKM01001612             867 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25478apa ultra-conserved element locus
            uce-7727, sequence.
ACCESSION   KCKM01001612
VERSION     KCKM01001612.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 867)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 867)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..867
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25478apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>867
                     /note="ultra-conserved element locus uce-7727"
BASE COUNT          249 a          176 c          213 g          229 t
ORIGIN      
        1 ttgaggattt ctgtgtgtct ctgctatctc cggaaaaagc gtaagaaaca aatcgatttg
       61 cgctatcaaa gaaacgtaat tgccatttca gatttcctgt ttaggattca gtcaagtaga
      121 tattgtttat ggttcataaa accttactac tgcgaggatt ctcagatact ggcagcacag
      181 agtttcaact ttcatggtgc tgtaaattag gaaaaagaac gtgtgataat actcctccga
      241 gaacagtaaa atagagctcc gcaatggtta aatggaattt tataagcaca ttcggtgtgg
      301 aactgttttg cattacatga gttgaatacc ttagagatga cacacatctg caggcacttt
      361 attaaatcct tagtcagcac ttttcaacct gatgagatta cttcttcatt tgactggaga
      421 aagggaagcg aagatctcgt accggactgc agaattcttt ctgatgtttc accttgagcg
      481 ccggggaagg acagtgagat gcttggcagg acaatgcaga cccatagcgg caccgccgac
      541 ggcgtggcac tgattttaca gagcaggacc ctcagttcgg ggggattcat ttagcctcaa
      601 ctcacgggga gaacagtacc gcaaagtaaa tggaagggaa ataaaatact gactcagaga
      661 tgatatcatc gtgaccgtgt tgtgatagcc cacgggcttt caatggagat tttaaattaa
      721 gaaaggcaac acgccgttct cggtccgggt gcagtcggat gggttgcggg caagggggtt
      781 aggcgtgaga gcataaaaaa tacttcagcc atctgaaacg taggggtgca ggcttctttt
      841 tttccccact aagcccccta atcgcac
//
LOCUS       KCKM01001613             784 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25494apa ultra-conserved element locus
            uce-7876, sequence.
ACCESSION   KCKM01001613
VERSION     KCKM01001613.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 784)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 784)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..784
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25494apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>784
                     /note="ultra-conserved element locus uce-7876"
BASE COUNT          280 a          185 c          169 g          150 t
ORIGIN      
        1 gacacagaag tccagaatat ttagtaaaaa atggggtgaa acccactggg atccagccct
       61 aggcactggg tgctgctaca ctgctaaaga ggaaaaataa acagaagttg caagcacttc
      121 ttcctcagtc aggatttagc ccatgctgca caataatttt taggaaaagc cctggatcac
      181 cctttgttta aacacggttc acaatgttcc tacaaataca taaaaggaaa acataataaa
      241 ttaaattcaa aataaaaagc cacactcaac agaaaacaaa acagaaagcc ccaaagcggt
      301 gagaagcaca tggcaagtgc tggctgatgc acgtgatggc aaatgttaag atggtgtaaa
      361 acacgactac gtataagaag cggattcatg cagttagcgc ttgttcacct gactgcccaa
      421 cagaatcagc agtggagaga gcactagtgg acctggaatg acgtcgagaa gctgcaagta
      481 gaaggaatgg caacacccac aggattaaca cacatttaac ccgagacaga aaatgccaca
      541 atccaaaggg gatgcgcgtg accgcgacca gtcaaggtgt gtcatagtga cagggagatg
      601 acgctgtatg tgaatgcata acagatacag tgcaagcccc acagcgacgc ctccatctgt
      661 ctttccccca tgactgtaaa cacagtgcat gacaaaactc atctgtaaca gtcccaaacc
      721 cagcaaagtt cggcaaaaaa aaaatcccag tgcacatcag tcacattcca gacccacaga
      781 tctg
//
LOCUS       KCKM01001614             267 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25510apa ultra-conserved element locus
            uce-4398, sequence.
ACCESSION   KCKM01001614
VERSION     KCKM01001614.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 267)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 267)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..267
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25510apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>267
                     /note="ultra-conserved element locus uce-4398"
BASE COUNT          101 a           47 c           56 g           63 t
ORIGIN      
        1 aaaaagatag aaaaaaaata gcaacgtaga gtctagacag aagagattgg gttgaaatct
       61 ggaagctatt cagtgaggct acggcacatg gcagcttgac tgcagcaaga gatcacatta
      121 cgctgcctaa ttacacatga aaaatgtaca catcactttt cttaaatgct tggaaaaata
      181 gatgttcaga tggcaattgc aaagtagtaa ctgagccagt catacatagt tggaacactt
      241 cacaaatggc atttcaaaag cctgcat
//
LOCUS       KCKM01001615             921 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25525apa ultra-conserved element locus
            uce-4680, sequence.
ACCESSION   KCKM01001615
VERSION     KCKM01001615.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 921)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 921)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..921
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25525apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>921
                     /note="ultra-conserved element locus uce-4680"
BASE COUNT          268 a          190 c          205 g          258 t
ORIGIN      
        1 tattggtaca ggatcctgaa tttgttaata aaacctgaca aacatcgtgt gcatttcaag
       61 aaagtctgcg ttcaagagtc tgctgaaagt ggagaattga tgcgaaataa aggtaagtct
      121 ttgggtgctc aggtctcttg ttttaaaaag attttgtcgc gatgcatttc agttcatttc
      181 accattcgtg ttcctacatt tgccttattt tcttttcaca ttttaagaag tgtttaggaa
      241 acacagggga atctcccagc agttttcaca taaaatgata atagtaactc gcttcctcct
      301 tcttcccatc ccccccagaa cagagcatac tactgaaatt atttaaattg actgagcctt
      361 ttaagcaagt aaacacattt taactagttt tttttcccca atccttccat tcatgcccac
      421 tatagaaatt agccttcact cttccttcac ttacacatgg atacacacac ttgcatggac
      481 acaagaaaaa tttcttttct cctgtcagca ttcctaccca acaatagtta gattagtgga
      541 aatgagggcc tccgcagaga aaggacattc agccacagaa ggctccctgc aggaacagct
      601 ggtaggggtt aatggctgct gaacctcaca gccagggcct attctctatt gtgtgttcaa
      661 ctcctgggaa ggagggagac ttgtgacagc ttctggggcg cgccggatca gaggtatagc
      721 agttaggtca gagaggtagt gttggagggg gaaaaggcta gccgggaatt gcaataaaaa
      781 tgaactctgt ggaggggacg gcggaggctg gaaatctgca aaaattgggc gcaaattgcc
      841 gcggggaaac agtaaaggat tattcagtaa cgtggcttct aaccttttaa caactgcgat
      901 atgaattaaa agaacaattg g
//
LOCUS       KCKM01001616             323 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25541apa ultra-conserved element locus
            uce-4161, sequence.
ACCESSION   KCKM01001616
VERSION     KCKM01001616.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 323)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 323)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25541apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>323
                     /note="ultra-conserved element locus uce-4161"
BASE COUNT          114 a           60 c           52 g           97 t
ORIGIN      
        1 tttatttaca gtctaggaaa taattcattt ggttgtgaaa gagttaataa ggaagaaaat
       61 cacacacagt gcgtgttaaa ggttagagga ataatcagtc atttgaaaaa cactacataa
      121 acatttttcc ggatgcaatt ttcagtccaa ggatacattt cccagtagaa atcagcagct
      181 aaaaaggaaa tcatttagtc tccataagtg ccaaattgta tcctgatttt tcctggtctg
      241 gctcgacttt caaaactagt ggttcaactt ctgcaatctt tcacccaacg actatataaa
      301 cacatcctta taagacagac ata
//
LOCUS       KCKM01001617            1038 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25556apa ultra-conserved element locus
            uce-4766, sequence.
ACCESSION   KCKM01001617
VERSION     KCKM01001617.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1038)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1038)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1038
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25556apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1038
                     /note="ultra-conserved element locus uce-4766"
BASE COUNT          295 a          213 c          176 g          354 t
ORIGIN      
        1 attaggaata tgtctgcaaa tagacattcc tgatgagtaa aaaagtcact taaacataca
       61 ctcacccaaa cagaataccg aaagtcaaaa gctatgctgt tttaatgaga gctttgtaat
      121 taggttgttc atttgctggg tgaaattgtc attagtagag gaaggtttta ttaattcacc
      181 tttttatata aagaatataa tgaattacta acattcttac gggtacagac tatgattatt
      241 tctgcttcct gccttgcaaa catcttgttt caaattaggt ttatctgctg tccaaaacta
      301 aatacaatga atagatgtat aataaaatct tttaattgtc ttagcatatg ttgcttttat
      361 taggtgagaa taattgcatt catgggatca cctacaaagt cctttagaat ataaaattga
      421 aatggcttca cactgagtgc acaagtcctt ctgagccgtg ccattttccc cttcactgcc
      481 tcttgtcccc ctttcgctgt aaagttcaca ttgaagtgtg acaagagaca cttgacaact
      541 gacacatgct ggatcttatc agcagtgagt gcagtcatgg gccctgactg aagagcgatt
      601 gtcatttcta caccatttat tcctctccta gcctcattgc ttgcttcctt tctgaggaaa
      661 ttttccctgt taaagtactg tacttgtcgt tttttggtgc gtgtctctgg aatttttttt
      721 ttaatttttt ttcccttacg aaaggatttt gttacccata ggcaagcctg taacagactt
      781 cctctaacct cttagtgtca ggactgctct aagctgattc aggctaataa aagcatccca
      841 acaaagcttt gatggtgtca ttacatcttc cttaaatccc cttccttgct aacatccaat
      901 aattctatta cctctaatca attcacaagc cattttattt gaaaggaaga gaaatcaact
      961 tcaaaccacg tcggtgcagt ttgcccagca ttcacagaag gtgatgatgt ttctgccatg
     1021 gctgcagttg actcttta
//
LOCUS       KCKM01001618            1022 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25570apa ultra-conserved element locus
            uce-7700, sequence.
ACCESSION   KCKM01001618
VERSION     KCKM01001618.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1022)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1022)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1022
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25570apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1022
                     /note="ultra-conserved element locus uce-7700"
BASE COUNT          269 a          224 c          237 g          292 t
ORIGIN      
        1 agaaatcccc aggcctgcct tgcttctcct tccaaaacag gtcgcaaaac actctggagt
       61 tttaatcttg ccgaggagct ctggagccag gtccgtctgt ccgtgaggag ccggaacgac
      121 tgtgtgctgt cagggtgctg gccctcgcct tcacggcgct cgggctgttg acagcggcga
      181 tcgacttgtg cccgatggct ggcgagaatg acagaaaata caaggcactt tgtttcgtgg
      241 tgccattcca gatttctctg tgacaacagg tcaacgggct ggcctactgc cattgggaaa
      301 cgacgttggg atgaaagcaa tactattttt tgtttgtggc cttattagaa atgtctgggt
      361 ttaagaaact tctgcttctc ccacattagt gctctagaca aatcttgagc tacctttgtg
      421 gcaaggccta acaaacgctg tcactttgac ctaatccact tttctgcaca gctgtgctaa
      481 agtcaccttt agttttatca cattttaatg caaacaaggc cggaagggtg cttgtttgga
      541 ttgaagaagc tgtgacaatt catctgaatg gggacttcag taactgggaa gaaaaatgtg
      601 acagggagct ttatcactgc attgtacaca acaatctgaa aattattgct tctttagggg
      661 gctattctct tcttgaggcc tagcccagtc tatgctaagc agctagacag aactttgaat
      721 ggtttgccag tcctaaagac agattttaat tctattgttt gtgggtatcc ctgactttcc
      781 taagaggatt caaagacagg ctgcagaaca aggcagctga cataagactt tggccaatct
      841 ttaaaattca aatggcaaag gcagctttcc tcggtgctct gaaactggtc aaactctgat
      901 gatgtttgct ttcaaaatct ggcaagttca cgcaaaacta aatgtacttg caaaacatac
      961 tttgttgagg ctttaaaaag tttgcttaac cactgatttc ctgtaacagt gcgaataaag
     1021 ca
//
LOCUS       KCKM01001619             886 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25585apa ultra-conserved element locus
            uce-7536, sequence.
ACCESSION   KCKM01001619
VERSION     KCKM01001619.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 886)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 886)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..886
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25585apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>886
                     /note="ultra-conserved element locus uce-7536"
BASE COUNT          251 a          201 c          236 g          198 t
ORIGIN      
        1 atttatgatt ttactggtgt attatcatcg ggtaataaga acaactcgaa actgccaatt
       61 atctcataag aggggtatca ccttctctat tttgaatgac tccatcgata aatgcaggtt
      121 ctgcttgcta acactccgtc acataatcag tggccttaca gcaggagaga cgagtgcatg
      181 agaaagagag aaaaaacaaa cccgcaaaca caccaacact tgatgtgagc taagcccttg
      241 gctcggcaac agagagcggg gagggggccg agggggctgg gaggaatcgc cccgagcagt
      301 cggcaggtca cacacacaga gtgtgcaaca gcaaactcag tttacaaaga gacatctgtt
      361 ccattacttc gatgcattgt ggctaattac atcctggccc gtctgtgaaa tgacagccac
      421 ttattctcca gtgaaccgta aaatctgtac atgttcgatg tgggcagtgg ggagtaagag
      481 gagtgcaggg gagtcgggga aggggggagg atggagaggg gagaatggga gaacggcgca
      541 ggcgaagcag caggaaaacg caccgcggct ctcctgccag ttcggtgtca gaactgagaa
      601 aggactagag aaagcactcg ggaagaaagg caacaaagca ctgccatttt gatgcagggc
      661 tgcaatgtct gctctaacac agagctcctc gctcctcatc ttcgcagagg gagtgagacg
      721 gtgccagcag cagaaattac accagacctg catccctgtg ctgtacttgc agatttctac
      781 agcgtttctg ccattgctgt tcagatcatc cttacctgct gaccttacag ctttgttaga
      841 ggctattctc ctatatacca atttaagttt agacctagat gaatta
//
LOCUS       KCKM01001620             830 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25600apa ultra-conserved element locus
            uce-1873, sequence.
ACCESSION   KCKM01001620
VERSION     KCKM01001620.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 830)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 830)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..830
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25600apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>830
                     /note="ultra-conserved element locus uce-1873"
BASE COUNT          295 a          134 c          147 g          254 t
ORIGIN      
        1 aataaaagct attcaaatgc aacagaagcc ggtagaaggc gggtacttgc atttaaaaag
       61 ttattgtatt catggcttca tttattttgg tggtggtaga atgtaaagta caaaataaat
      121 tagaaccaaa aatggaaaag atgggattaa tatacagcag ggctgtgaat gatttgtttc
      181 tcttcccaga atgcctctct ccagcttatc tgaacactta gctatgttta tttccataaa
      241 gaatgcattt tattctgaag gaaggtagga tgtgcttttt aaaataaaga aaaaacttta
      301 ttaaaattca aaagaaaagt aaatagagat gatttgagaa gctttattca tttatttggg
      361 caaacactgc taaaaacatt taggtgcact gcatgtttaa aaagtaataa atagctattg
      421 tgcttacttc ataaacttgt cagagtgtct tcattttatt ttcctgaaca aactgaattt
      481 ctgtactgct catccccagc cagttaataa atacatcacc ctaaaaagtg ctgtggtatt
      541 aaatttacag cagataaaat atggatgaag ttgctgtgct tcaggtacgt caactgtgat
      601 ttaatatctc tgactaccct tatgaggagt aaaagattac tcggctgctc caacagcaag
      661 atactgacct ttgctcccaa gtaacagcca ctcagcaaat agtaccaaat gaagaagtag
      721 aataacatat agatttgccg taagaaaaaa aattgatcta aatccacata tcaaatctgc
      781 tgatcggagc tcttcagaaa aagtacctca taatctttag tgtggaattg
//
LOCUS       KCKM01001621            1080 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25616apa ultra-conserved element locus
            uce-7304, sequence.
ACCESSION   KCKM01001621
VERSION     KCKM01001621.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1080)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1080)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1080
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25616apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1080
                     /note="ultra-conserved element locus uce-7304"
BASE COUNT          320 a          200 c          252 g          308 t
ORIGIN      
        1 tgatagctgt gtcaatgaaa ggcccattca aatgaataaa acattaggat gtacctagtc
       61 cctgcagctg cactcagaga agggcatata agctgctttt gctggatgga atatatgtag
      121 cacaggcaga aactttaaag aaattttaac tgaatgtctg aaatctcttc agctgttcat
      181 atcagtaagt cttccagtag tgacactttg taatgattgg aaggtattta gtatagcaaa
      241 gatgctccag gaaaaaaatc cgactttttt gattttttcc ccattgcctt gcgtcgaaaa
      301 tgcctgtgaa ggatgctttt tgcttaagtt cccctctttt caacaggttt taggccttgg
      361 gctattggta tccaagtagt taaaactaca tcagcactaa tagctatgag ctcatcttgt
      421 ataagcacat ttttagttaa acaccgcaat cttggaaaaa aatgttagtg tgcttaaaca
      481 gcctggctca gaatagctca caatatgacg cataccacag gaaataaagt ggtatgaggc
      541 acctacaaaa tatttttcaa acaagtcatt gaagctgtaa gccccatgcc tcagctttag
      601 gaagtcactt attaagaatc aacaccagcc gtgccaagct aagctcttgc tcttggtgat
      661 tttccaattg aatattcagg gccctgtctc ggtcttgttt tcagggaagt acatgcctgg
      721 aatgttagca agctatttgc tggaaaaaaa tgcccacaac aggcccaatg ttgatcacat
      781 taatgcgttt gagtgggtat agagtgcaaa tgattgaaag tgcttccaga tcttggttgc
      841 tggggacaaa gcaggctctg ttctctgatc tgatggtcat ttttttcagc agaggatgtg
      901 gtgcaggaag agggaacagt gccaatctct gtctaatggc tccaaacagg gcctgggcct
      961 agctctttgg atgctgatga gtgggaaatg aaacacagat gggtcagatg ggtaaggaga
     1021 ggggggatta caggtcaggc caaagagttg gaataaatta agtgcttatg aggtacagaa
//
LOCUS       KCKM01001622             722 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25630apa ultra-conserved element locus
            uce-5148, sequence.
ACCESSION   KCKM01001622
VERSION     KCKM01001622.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 722)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 722)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..722
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25630apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>722
                     /note="ultra-conserved element locus uce-5148"
BASE COUNT          212 a          179 c          151 g          180 t
ORIGIN      
        1 gggtgataat ggagtacttc aaacacgaca gcattaaaaa accagctgaa ctttcccctg
       61 cccatgcctc agccatgccc taaatatacg taacgagctg cggaagcccg ctcggcgcga
      121 gcgaggagcc atcagcagat gttgacagcc ttgatgtctt ggcgggcagg atccggcagc
      181 atctcccact gtatggcgct agatatttaa taaagtaaaa cccccaggat caagaaggct
      241 gcagtccctc ccagctcctt tcttctgctt tgctcgagct ctttcaagcc tgcctcccgt
      301 ctctctccag aaaatccttt catgcctccc tcaccagact gacattttga caagttgcca
      361 cgagtgacat ctgatttgta caaatttcaa gactaataaa tctacctgtc aaagcggaaa
      421 ctttaaaagg agctaagccc agcgggtata gtttaacaga actcaagttg atgaaactgt
      481 aggatggaga aattatatct gtcacaatcc acccacatta gttctgtaga gatgttggca
      541 actgaaacaa acgtctttca cagcctcgaa gaaaaggggg gaaaaaaata aaaggagact
      601 gttaatactg tgagtaacaa gtaacagttc tatttgtaaa ctagcaaatt tatttattta
      661 atttttaatt tgcctgtaga cttgcaaggg cgggagcgac cctccctgct cccacatgcc
      721 gc
//
LOCUS       KCKM01001623             777 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25644apa ultra-conserved element locus
            uce-884, sequence.
ACCESSION   KCKM01001623
VERSION     KCKM01001623.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 777)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 777)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..777
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25644apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>777
                     /note="ultra-conserved element locus uce-884"
BASE COUNT          233 a          169 c          140 g          235 t
ORIGIN      
        1 cgataattaa ttatggcacc ggctgatgca ttttgcagca tctccctgcg ttcttccccg
       61 agcccacagc tctgcactcc aaaactgttg ctgcacctga aaaggaagaa agcaaacgac
      121 aactttttca agcacccgat aaacctttcc tgggcagtgg caacacggct aaatacaccc
      181 tagataaccc aaggggaaac gaatgacttt tttcagatag aattgataaa gctggcccag
      241 gcttgtttgc cttttggtta tgcgccttct tcttaaacat aaggattctt ctagtcagtc
      301 aaggggcaac tcgcatgcca ccatctttta ttcaaaggca ggcacagatg tttcttctgc
      361 aggggaggtt ttaatttatg aaaatgatat tgtttatgca tgaatgcact ctgcataaca
      421 cacagtactt ccatctgatg agagaaatac cacagaacca gtgccaatgt caggaacata
      481 ttctgcaaat ttagttgctt aaatgtttaa tgaatatttg gaaggcattt ccaaaccaca
      541 agaaaccttt tcaattacct tttctttttc cgtgcttaat agaaaaattc aactcctctg
      601 gcccatgcaa tttacttaaa agatctacct aggttgtctg aacgtttgct actgtgacac
      661 atttgagaaa ataacatttt aatgttatga gcgacctcat aatgaaaatt aattaggcat
      721 tttggtaact agaggctcca ttttagaaat cacttgcgag ctttgttact tcatcta
//
LOCUS       KCKM01001624             781 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25660apa ultra-conserved element locus
            uce-3784, sequence.
ACCESSION   KCKM01001624
VERSION     KCKM01001624.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 781)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 781)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..781
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25660apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>781
                     /note="ultra-conserved element locus uce-3784"
BASE COUNT          192 a          173 c          210 g          206 t
ORIGIN      
        1 ttgaatactg gctcattttg gagaatctgt gatggtttta aatcatgctt tgttacgatt
       61 tctcccttcc tttgagcgct tggaaaaatt tctgaagtct ttcaggggaa gggagggctg
      121 ccaagtgcat ggtgcagaga gtctaggggt gttaatactg tgtgggatgg gggaagcgag
      181 gttgctctac ctcttctgga ggaatcccca attgtgtgtc tcacccccag gtgaagtagg
      241 caatgctgcc aagatgatgc tgattgtgaa catggtccaa ggcagcttca tggcaacgat
      301 agcagaagga ctgactttgg ctcaagtgac tggccagtcc caacagaccc ttctggatat
      361 cctcaatcag ggacaacttg ccagcatctt cctggaccag aagtgccaaa gtaaagttct
      421 cttacgttgt tttattgtag cctgtttgcc acaacctagc agcgtttcag ataatggcag
      481 aagggagaaa ataaccgtcc cttcttcacc agcctggggt tttgggtatt ttaagcgttc
      541 tggaaatgaa gaaccaagtt ccattccctc cccttcatag cctgggcttc tgagaaccca
      601 ccctaagctc tgctttgtct acaacctgct taggactcga gctcacagtg aggatttcct
      661 tggggcagag taatgagtga agcggagtgc aagctgctta ggcatccgag ctcactttgt
      721 cagcgggcaa tggcagtatc tgctgtggcc agaggaaggt agagagcaga gaaacagaag
      781 a
//
LOCUS       KCKM01001625             943 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25675apa ultra-conserved element locus
            uce-5090, sequence.
ACCESSION   KCKM01001625
VERSION     KCKM01001625.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 943)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 943)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..943
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25675apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>943
                     /note="ultra-conserved element locus uce-5090"
BASE COUNT          263 a          177 c          174 g          329 t
ORIGIN      
        1 actgtaaaat aatatgtagt catatatttt gtgtttggtt tttgggagtg ggagttattg
       61 cttattctgg aacagttttg catagtttct tttacttcta tccctttgtc atccccaagg
      121 acacatggca tgttgttttg tttttttttt cccttttttt gccactgtgt aattctgcat
      181 tgttttccca tttttagggt gctactagac agagcacatt cggactacga taatacattt
      241 catcatctgg atttggaaat gctttcctca tcgcaacact cttcaatcag tcaatttgcc
      301 aatacctcag aaacaaatac ctcggacaaa tctttctcga aagacctcag tcagatacta
      361 gtcaatatca aatcatgtcg atggcggcat tttaggcctc ggacaccctc cctacatgac
      421 agtgacaatg atgaactctc ctgtaggaaa ttatacaggg gtataaatcg aacaggcaca
      481 gcacaacctg ggacccagac atgcagtacc tctatacaaa gtaaaagtag cagtggttca
      541 gcacactttg gtatgtttat tttgacaaac ttgcttctag agattttaaa cttgcctctg
      601 aaaatccaga atattgttag gtcacccata cctgacatca tggtctgttt tgctgatatc
      661 agcccatctt catttttatc tctttatttg ctaaacagaa cgtttattta ctgctagcag
      721 ttgtgtacta catctcaaat tcatgcaaat gcaaccgtgg tatgtaatta tagttttaga
      781 aatatgaggg tttagaagcc ggtattgtgt agagtttgac tctgaagatc tggattttta
      841 aaacgagttt gtataaatag tatgttccag attttttcta gtacaaggta tggtggtggg
      901 agatggttag ataaaatgtt acatttaaaa tcccaacatg ttt
//
LOCUS       KCKM01001626             709 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25691apa ultra-conserved element locus
            uce-1756, sequence.
ACCESSION   KCKM01001626
VERSION     KCKM01001626.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 709)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 709)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25691apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>709
                     /note="ultra-conserved element locus uce-1756"
BASE COUNT          211 a          141 c          149 g          208 t
ORIGIN      
        1 tactgatact attaaatggg gtgaaatgtt tcacaggaaa gaaaaaggta ggatgctaat
       61 tcgattgaga ctgagtaaac acagtgcact ttcttttctc tcatttgtta tgtctgtgca
      121 ctgatacaga gagcagctct agcacacagt gcaatccctt ccatccaaaa ccaagcttgc
      181 attccagtgc cttccagcaa agaatgtgtt cctagaagaa ggaaaaatga actagctagg
      241 attttacaag ttattgcatg cagctgagtg ttgtactctg ggagtcaaca agactactgc
      301 tgctttaagg aaggatggtc tccaaacggt ttatgaagtg atagatcata tataaatagg
      361 ttgtttgctc tcagtacaga tgccatcatt actaactact ttcaggctct ttgagagcta
      421 aataatttcg taatgcatca ttgaacattt agttgcttcg atagcagatg gtttcagggg
      481 tccatctgct cacagcaatg ttttcaacaa gcccccttca ccttcaccaa aaggttcaga
      541 aacattagaa tattcattcc tcaccacagg tgcctttctt ggagcctccc aatatacagg
      601 catagtgggt cgcacgctcg gaaagacaga ggtggtttct gaaatatgtg acttagtcta
      661 ttgtgtgtgg attactactg tcagtacatg aagacagcag taatattag
//
LOCUS       KCKM01001627             749 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25705apa ultra-conserved element locus
            uce-1453, sequence.
ACCESSION   KCKM01001627
VERSION     KCKM01001627.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 749)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 749)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..749
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25705apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>749
                     /note="ultra-conserved element locus uce-1453"
BASE COUNT          228 a          165 c          127 g          229 t
ORIGIN      
        1 ggctgcctct gcctgccagc aaacttgcca cgagattaag ttgccattcc tcacactttc
       61 taccttcttg atccaacatt acaggcaaat ctaataccaa gcattttaaa tttttttaaa
      121 taaatgctga gtttttatac ctttttttgg gggggagggg agaagccacg cttccaaaat
      181 tatgaattgt ttataaatca agctctatga cttacacatt tatggtacca tttctgtaaa
      241 taatgaggcc catgacttgc acacaataca gctagaaacc acagcacagc tcagttttaa
      301 aatgattaac tgctgcatac agctatgact ttatttgtaa ggagcagtta ggagaggcaa
      361 aatgagtatg cagctttcca ttatatacag gcatattttc aatagccgtg tgagtctttt
      421 tatggctcca tttatgtcaa tgtcctagtg tcatctgtaa taaactggca gcaattagag
      481 ccacaataaa ccccataatg caacacaaac aacaggaagt ctcccagtac cccaacgctc
      541 taaatttaca tctccccttc gaaagtctat ttatcaccag agtttgcaag cccgtctgct
      601 aaagagcgct ctaattaaga tgtatctggt gaacaagtgt ctgcttttca ccctactctt
      661 ttaacatatc atgtatgcac tgagcaatct tcgtcgggtc tcataatgag aaaactgtga
      721 tatgcaaaaa ctctgtgaaa tcttttatc
//
LOCUS       KCKM01001628             729 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25721apa ultra-conserved element locus
            uce-6143, sequence.
ACCESSION   KCKM01001628
VERSION     KCKM01001628.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 729)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 729)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..729
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25721apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>729
                     /note="ultra-conserved element locus uce-6143"
BASE COUNT          211 a          124 c          145 g          249 t
ORIGIN      
        1 tagctgaact gtcacttcca gaaaaaaaaa tgttttagct acttattttg cagtttgaaa
       61 tgcaagtgtg gcttaatcac ttgcaacaac tgattaaaca ttaccctgca aattgctttc
      121 tgatgagtgt tttatgtgct cttgtctctg cagactgaag aagtcctgaa gattgatgga
      181 gggccatgct attcaaacag caggcgttgc tgagacagaa gctctttgtg ctaggcagcc
      241 ttgctattgg aagtctccta tatctagttg ccagagttgg gagcttggat aggtaagtca
      301 ttaagtagct tctctcttaa ttatagatga gctaagactg tctgaggttt tgcttcaata
      361 atctgatttt aattttttta gtgtctactc atatacagaa aggcagaaag acagtagtag
      421 gtttcattgt tctttccttc cctctggaga agagagtagc aagatagaat tacaggtcat
      481 ctctgtcaaa atacttctgt ctgttcattt gtattctaag cacattggca cttgttttca
      541 gagaagaagt aaaacagcat ccagcataaa tgtcattaca gtaactcatt tttgtcttta
      601 tgcatctgtg tgttgacctc tagtttcagc aaaacagtca tgatgtattt atatatcatc
      661 ttttctaaat ttatgagcaa gcaattaatg tgctacagtg atagttaaaa ttaagtatga
      721 gcctgcaga
//
LOCUS       KCKM01001629            1257 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25736apa ultra-conserved element locus
            uce-127, sequence.
ACCESSION   KCKM01001629
VERSION     KCKM01001629.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1257)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1257)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1257
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25736apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1257
                     /note="ultra-conserved element locus uce-127"
BASE COUNT          362 a          229 c          233 g          433 t
ORIGIN      
        1 aaaaatggga caataatata gcatccctgt acaactcatc cgtttacaca tgacactcgc
       61 ttcgtgggct ctgattagct tgttagtaag gaggcaggaa gaagtgcaat caagttttta
      121 tgattcatca tttctgttcc ctgtttggga gacaatgtca gtgctctttg ccaatcatag
      181 aaggtggctt tcgagtacct tagggagatg ctttttttaa agatgctctc tgtgtttctg
      241 aaggctgagc cacatttcta aataataggg aagtcctgga gtttgttttg tgtgtgtgtt
      301 tttttgtcct aattgtatct gctaacaatg cttttatgtt tgatgcacgt atgctaaaag
      361 aaaacttgct tccagtttgt ctgtaatcct cagaagtgtt tgtgcagaaa taaattagag
      421 atggtacctg gaatattttc tgcaatacaa aaggcaaatg taagttttat taagttgaaa
      481 aggatacatt ctcttctcct gaccttgatt tttttagcta tattctctat accccttctt
      541 tagaagtatt attcttcatc ccatccaatt accatttcta tcagctcttc tgaaagatta
      601 tgctttttgg gtgttcttct gtagatgtct ttccagtggc ttcacttgat gaatgtgaca
      661 agttttgtgt tttctccctc ccctcattga attgaaaagt tttttgataa atacaggcca
      721 ataagtgccc aaaggcagtg tttcaatggc tgctaaatct ttcaaggtta ggacttaacc
      781 tccgttctcc ctaattcaac tgcaaccttc agtctggagc caatcaagaa tatcagatga
      841 tacttaaaca atgaaggatt tctgatattc aggtacagcc tctgttcaat aggattgcaa
      901 attctttgtg tgaagaaagt cggttttgct ctaaagtact gtcacaaaaa gtgaaattac
      961 catttgcttg gaatgatgcc attcatcatt gtcagaatac taagcattgt aagtagctag
     1021 gcctctccaa attaatgcct tgttttgcat cggctaaatt tcccaaatcc tcgaggatgg
     1081 gtcatacaaa actcatctca ccattttaat ttatcaatcc aatatgagtg cggtgaaagg
     1141 gagcttcatt cggtcttagc tcttttattt acagtctaat tctaaaagaa aaggaaataa
     1201 gatatgaaaa taagttggaa aataagataa atctctcagt gaaatcacaa gatctac
//
LOCUS       KCKM01001630             905 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25752apa ultra-conserved element locus
            uce-1008, sequence.
ACCESSION   KCKM01001630
VERSION     KCKM01001630.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 905)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 905)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..905
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25752apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>905
                     /note="ultra-conserved element locus uce-1008"
BASE COUNT          313 a          192 c          135 g          265 t
ORIGIN      
        1 taaaggaaca ccctacaaac tgtacatcac ctgactttaa tctttttaac atacattaga
       61 aataaaaaaa ttgtgtatgc tctcgcacag cattcctcag tgcctgagca gctataaaaa
      121 gtagcctttg tttcctcagg taggtagtga ctgatgagaa gtgaactgca tcgcagagaa
      181 agacaaccct aacacagtga tatccatttc cattaggcaa ataaacaact acaaatcatt
      241 cagatgatgt aaatgctcaa tgatatttgc ctcctgatat ctcagagtta cgactgtctg
      301 aagttttata agcatatttt catcagagaa cctactagag cattgataca tttgattttc
      361 agttttttct aatgacaaat caccgtcttg aaagcaaaaa ggcaaataac tgattataag
      421 tgcaatgaaa gtctcttgaa tttacatata catttacttg taccctgtca cattttctta
      481 acctctaaac ctccacacaa catataaatg aacttgtctg gaattgtttt tttcccaaat
      541 tgcagcctat attttctgca gcactgatgc aattatgcca cctcaattgt ctcacagtgg
      601 agcacaatgc aaaactttgt gtatcaagaa aataaagccc agaaaattgc ctgtgacacg
      661 caccaacaca aagacagcta cgcttcctca gaaagtggac agaataaaag tagacagttt
      721 ctattaacaa taacaagaca aaatacagag gccctttatc tcttaaaatg taaatttata
      781 caaggattca tgctgccctg ctgtaaatat caaatacccc ttaagaccat agaacaagaa
      841 tgaattgatt ttcctcctag tcttcgccat ctgcagattc tcatagcttg gcattatatc
      901 aatgc
//
LOCUS       KCKM01001631             809 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25768apa ultra-conserved element locus
            uce-4648, sequence.
ACCESSION   KCKM01001631
VERSION     KCKM01001631.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 809)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 809)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..809
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25768apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>809
                     /note="ultra-conserved element locus uce-4648"
BASE COUNT          229 a          165 c          180 g          235 t
ORIGIN      
        1 aaaccctaca atgctaatat ctgaatttga agctgatatt taaagagggc actcacttta
       61 cttacgagat taaaggcaaa tgctctcttt taaaaacgaa gccatgctgt gttttgcacc
      121 ttttgacact tattaactca ggtcattaga aagaggctaa ttaaaaaaga atgtaaaaca
      181 aaagagtcat ttgtctatcg ccgagcgcgg ttcttcatgt acgctggctg gaggcagtct
      241 ccgtttaaac cttgggtaca gaaagcactg agagccactg gggcatgctt ggagcttgtc
      301 atggcttttg gcgagactgt ggtccggctc attatgcacc tcataaagaa gagaagtcat
      361 tgtcatcaaa attagctgaa gctggaattt acattcatgg aaattttggt ttccccactg
      421 tcctctgggg ctggacaata aaggaaacct tttaccagct gcagttcaag taagcgaagt
      481 tcaataaatg cttagtgctt catttccaaa cgttctgtgc tacacgcatg tgatatttta
      541 cagccggtga gaagctggca caatcagcgt gtgaagtccg ctggttcctg gtgcgtgaga
      601 tttgtagggc acacccaaac ccagtttgta gaaagatcag ccacttgtaa ccatttatcc
      661 cccaaaatac ttctgttctt ctaaagggag gttttgctag cagacacctt ctttcccaca
      721 aggttaaaaa agtgtttttt catgggaata aactcttctg atgttagtga gggagttctt
      781 ccaaggactt ccaagagggt gttacagtt
//
LOCUS       KCKM01001632            1069 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25784apa ultra-conserved element locus
            uce-327, sequence.
ACCESSION   KCKM01001632
VERSION     KCKM01001632.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1069)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1069)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1069
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25784apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1069
                     /note="ultra-conserved element locus uce-327"
BASE COUNT          325 a          214 c          198 g          332 t
ORIGIN      
        1 ccaacaagga aaacacaaga aagcatcatg atgttgtttg tactccagct ctatattagc
       61 tcaaaaaaaa ttacagcagt gccattttca attcagtgtt atgctagaaa aggttgcaaa
      121 ttaattagaa ttatgccttc tttgtgccaa gtgataattt actgcaatta attatcaaaa
      181 gatctaccgc tgtcaattac agtacttgct ctttgggggg ggagaagcta tttacgtata
      241 gctaaattct gtaacaaagt tccattttac tttcattgtt ttcaattaaa ctatcatcat
      301 ttgctttccc tctgccaaac acaataaagg ctcgttaaga actaatcatg ctactgtgac
      361 cttttttttt aatccaaaca ctagctagac ctgcactgag tcaacactcc tattgttaca
      421 cctgcaaatt gtacgtagag aggagcatac ttcagaatta atgagcgcag ctgtggtctc
      481 tcttacattc aacacttgta aaatagacct ctttaaagtg ccattatcac aatattgata
      541 gagttattta tagtactgca aacgttccca gtcataacag agtccttgtt atcccccaca
      601 gcagttcgtg ttgttgccat ctcctggact cattccacag tttgcgataa ggcaccaggt
      661 ggacaatcct tcataaatga actataaaag acattaggaa aacttctata taagcaagtt
      721 ttagagctgg aaataggtca agctgtcaag acccagcctg cgtaagactt gtcatgttct
      781 tctgctacgt ggtttcctgt attttctgtg tgggatgtga aatgcaatta caggcagcac
      841 aagccgcaaa tgatctggat ggtattgtcc aaattagagc tgctttttgc agttactaat
      901 actgttttac cataattcag taaaacagat gtaagttcaa actcttggtg tcagttgctg
      961 aaaacaaata tcacaggtgc caactttggt tgctaaggga atacaagctt cttgggcttc
     1021 acggtatgcg tgcaaacagc taaagattgt ccaaggcaga ggttgtgct
//
LOCUS       KCKM01001633             480 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25799apa ultra-conserved element locus
            uce-6570, sequence.
ACCESSION   KCKM01001633
VERSION     KCKM01001633.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 480)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 480)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25799apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>480
                     /note="ultra-conserved element locus uce-6570"
BASE COUNT          158 a           97 c           76 g          149 t
ORIGIN      
        1 cagtagtgtg aaatatatct actccattta ctcttatcca ttgcacctac tttctttttc
       61 cctttaattt ttatatatgg taaaaatttc attgaagaga gattttagat gacaggactg
      121 taattttaaa cccaatagaa gaggtgtaag caatttgagc ttagctgaag cataatctta
      181 ggttgtcaag aagaaaccca ttctccctat gctaatcaat cagtatatca accgaccaat
      241 catctcttca gcttagcata tatcctaagg tttgatatat ctattaactg cccatcatgc
      301 agctggtctc cagttgatga gattccccct atcttggcat ttggaggcag acaactgagc
      361 tatcacagcc tcagataaat actaaagtgg agatttcaat cctgctcctg atagcaaaga
      421 caatccagga atagagaaca tattttcaga aaagaacaca tagagaatta cattttcaac
//
LOCUS       KCKM01001634             831 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25813apa ultra-conserved element locus
            uce-2456, sequence.
ACCESSION   KCKM01001634
VERSION     KCKM01001634.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 831)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 831)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..831
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25813apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>831
                     /note="ultra-conserved element locus uce-2456"
BASE COUNT          274 a          158 c          185 g          214 t
ORIGIN      
        1 ggtattttca tcctctcagc attagtttaa aataaaaatt ctgagtagac agggctgctt
       61 ctgtaaatca agagcaaagc tccagagcat tgcacccggg tgataaaagc aggacagtgc
      121 ccgcagcaga gtatccacag acacgcattt atttaatgtg aacgggtcgt aagtgggggc
      181 tttgctggtt tatttttttg gagagcacct aactctttgg agcaacatgt gaccaaatgt
      241 aatacgtctg tccaaaacca cacgctgtat ttattttgaa aacacttgtg cgagtttgca
      301 ttttccagcc acccttggga taaaggtttg taaaaataaa gagcactttc ttccttcgga
      361 tgaagaatcc ttgaataagc agaaagaggc caagatgcag gtgatttatt taagtctgtg
      421 tcaatgataa tgatgtcatg gtttccagca cactgtgtcc accccattgt gggacgaaag
      481 aatgtcaagg acaattccaa acacaaaact ttgattgtgc tggaaccgga aaggcacagt
      541 aagaactcca ctgcgctctt cagttcaaaa cctgcatcct gcagacaaac tacagaaagc
      601 atgggagaaa gagcaaagga gagggggctt atctcagagt aaagctatgt gctgaggtac
      661 tcgggtagac agccaggcac cagggataaa acaccactga ataaaacagc acccaaatta
      721 gaattattgt ctatattgtg tgttttgaac aataaataag aaaaatattt tatcaggaga
      781 aaaatgtgtt atctaagagt caggataaac aatgagcagc tttttaagac c
//
LOCUS       KCKM01001635            1107 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25828apa ultra-conserved element locus
            uce-4308, sequence.
ACCESSION   KCKM01001635
VERSION     KCKM01001635.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1107)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1107)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1107
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25828apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1107
                     /note="ultra-conserved element locus uce-4308"
BASE COUNT          312 a          234 c          215 g          346 t
ORIGIN      
        1 aaacgatcat atgccacact tgttacattg cttctgttca ttttttgaga aaaatataaa
       61 catgcagttt ttttaaaaaa aatgtcacta aaaggagggt gcacctagct gtagatctga
      121 tgtagacaat atctgttata atgtcctgat gctgccatat caaaggcttg tcattaaagg
      181 caagcatact atcaactggg aaagcagact tatattgcaa ttattttcct attagctgct
      241 gcccgttgct cctgacaggt ataaattaga cctcgccagg ttgcctacag attaatgagt
      301 tccaaaattg acatttaatt gtttgggagt aagaggcata aaaagaaggt atctgcaaaa
      361 aatctttatc cacctgcgat tagaagatat tctcctttct ttctgctttt cctttctccg
      421 tggcattgct tgggtgataa ctgacacttc tatcagagga ttcctttcga cgcagcagaa
      481 acttgcagct gaggcaaggc cagaattaat aatctgcgtg agcaaacaca cagctgctgt
      541 ttgtggagag agattctatt aacgaacagt gaattctcat aattagctga gcggtttctg
      601 cagctgcctg cctgacccca gactacacaa attgtgggtg gtgttcggcc tctaaatcaa
      661 tcttacctaa ttactataag catgttcctc cagtcctaat gacggggggg gtgtgggggg
      721 gaatagacat ttccttaccc attcaaatgt tcctcttatt agattctcct ttgtgtctaa
      781 attcatattt tttctattag catttctaag ggtatacagg tgtggttaca aatcagaagc
      841 acagaagtat aattcatgtc ctacagccat gtgccagtgt gtgtctgctt tgcaaacagt
      901 agcaaaatgt gtgcttgttg gaagcatctg ccttgcttca attcacaaaa cataatttaa
      961 agcacacatg tctgtctgga ttcaaagcct tttctctgcc ctacttcccc tcccccccaa
     1021 attaatgtga caaaaaacgg aaaatcatga atggttgtgc cttctcctgg tctgaagcac
     1081 agttacttac tcctgcctca tcatatg
//
LOCUS       KCKM01001636             823 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25842apa ultra-conserved element locus
            uce-2014, sequence.
ACCESSION   KCKM01001636
VERSION     KCKM01001636.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 823)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 823)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..823
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25842apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>823
                     /note="ultra-conserved element locus uce-2014"
BASE COUNT          268 a          140 c          117 g          298 t
ORIGIN      
        1 aaaggagact caaagttggc cattgcattt gaattgcaaa gtagcaatca attagtttat
       61 cattaatcag ataattttgg ggatcgtgaa taacatgaaa tgaaaagaag aaataactag
      121 ctggataatt ttcaggaacc atctctcagc tttataaact aatcctcctc taatggccct
      181 ttttattgta atttataggt tcatcattac cctttttgta ttagtaatta tttctaaaat
      241 accaaagaac catctttttt tcaaggtcct tctatgtgcc tgatttacag ctaggctcgt
      301 gttggactct gtctttctga ggtttgacat ttcaaaatat ttatagctct tttacattaa
      361 tgcctttctc atgaatctga aggtgaccgt tatttctttc atcttgttgt aattaaatgg
      421 atcaactgta gctttattat ttccactatt tatctgtgca gtgcattaaa acattcagat
      481 tagcaagtga tattgagcat tatgtgaatt ataacaaaca aatatttcct aaaacatagg
      541 ttacacttga tgcattggcc aagaaattgt tccaagtgaa agcacaaaat ctttaatatt
      601 ttattgatca gatctaaacc ttctgcccaa agtggcaatt aaatttcaat taaactgact
      661 gaaagcatca tattaaattt cagcacttta cgagctatca gataatgctg caggacaaat
      721 ctttagtatg atcacactct tttcaaatta tattatcctg ttcattcaca ataaaagtga
      781 cagttttagg tatactttca atatttcttg aatataaacc ctc
//
LOCUS       KCKM01001637             660 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25858apa ultra-conserved element locus
            uce-7957, sequence.
ACCESSION   KCKM01001637
VERSION     KCKM01001637.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 660)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 660)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25858apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>660
                     /note="ultra-conserved element locus uce-7957"
BASE COUNT          219 a          124 c          113 g          204 t
ORIGIN      
        1 aaaatctctt aaaagaaaaa gaattaactg aagcttacct gtactggaat gtcatatttg
       61 taatttttat ctttatttcc tctccgtggc gaatttctcc agtcatttca aagagtttgt
      121 tagccatttt ctcataaact ttggcattcc ttttagtttg tttcagctca tcaaaaaatt
      181 cttcccaaac cagcattaaa cctctcattt ctgcatcagt ccagtttctg gccctcctgt
      241 gtttctcagt ctgagaagag acaatgtaac tgggaatttc tgctgcagcc attgctgact
      301 gacctaaaag ggttttaaaa gaggacactt aatatagatt gaggttttag tttaggtttt
      361 ctgtagtgca agacatgcat atgtggataa agaatttgaa tgacaacaga acatatgaaa
      421 cctttttgca acagcttgaa gcttgagtgc acaaaatggg gcctacatct gacaggcagg
      481 aatttagtta aaagctttta aacagagaaa cgtcattttg atgtcacgtt tccatagcaa
      541 cagagcaact gcataagcta caacaacaaa aaccttttaa ctgaaagcca aagaatcagg
      601 acaaagttga caggccatca atattaaagc ttttaaacac tttaggttta acacaaaaaa
//
LOCUS       KCKM01001638             841 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25874apa ultra-conserved element locus
            uce-7877, sequence.
ACCESSION   KCKM01001638
VERSION     KCKM01001638.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 841)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 841)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..841
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25874apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>841
                     /note="ultra-conserved element locus uce-7877"
BASE COUNT          264 a          145 c          152 g          280 t
ORIGIN      
        1 aaaaaggaaa actccaatga agtctatgca gttactctat tttacataag taaaatgaga
       61 atagattctg gcctaatgtt tatttcattt tatcagattg gataatactg tcctggtggc
      121 attaaataca gctgatctct cccctcccct tctgtgcaca catgtttttg ttaaaattta
      181 actatttaca tctatgtctc ttagtattgc ctacaaatca gtcaaagaag agtaggtcat
      241 ctatcctgcc ctactgttta tatattaatc atctggcaaa taaaccgctc agtatcctac
      301 ccacctcagt aatatttgtg atgtaatttg tttggatgcc caaatgtcac cagcgttgat
      361 tgtaagagat gaaaaaaatg tacttgctca gcacaccaag ctctgggcta aaatgtaagc
      421 atgaaatctc tggtttattt ttgtaataat gtttacagct gtttaatgac cctgaaaggg
      481 ttcagtagtc tggtgttctg tatttcttaa caggagtgta ttatgcttat aacagcctta
      541 gttaaactgt ttcagctaca acaagaagaa caatatttaa taaaaattca gtatatattc
      601 tgaagtttct cagcaatacc tgtttatgag ttgcgaagaa ctgaagcagt ctgtattgca
      661 gtatttagaa tttgtcagtg gaccacaaga taatgtagat atatgtgatt tttctagccg
      721 gaaagataaa tactaggtct atattctgtg agcataagta acagtgtgtg taactctaac
      781 tgctcagagg atcagggcca gagcgagctt gtcatttaaa cacatgagct tgtaaagcat
      841 t
//
LOCUS       KCKM01001639             894 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25888apa ultra-conserved element locus
            uce-7623, sequence.
ACCESSION   KCKM01001639
VERSION     KCKM01001639.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 894)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 894)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..894
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25888apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>894
                     /note="ultra-conserved element locus uce-7623"
BASE COUNT          290 a          193 c          191 g          220 t
ORIGIN      
        1 tctgttttcc tccttttttt cttccctccc ccaagccaaa cactctacat gtgcatccct
       61 cctgccatcg cgcccattcg atggcatttc cacccctttg cttgggaggg tcggtgtgtg
      121 cgtgggccgt gaattttgtg acttccaggt ggaacccaat ccacgttgcg actcacgtgt
      181 gtgtgttttt gtttatcagc tttttcaggc agcagctagg ggaccacact gcttttccgt
      241 agctgtaagc acgcgggctt gtggcaacct ggctatcgcg caaggtacaa acgaggttta
      301 aacgcctgtc ctgttagaat tcaggggacg cagggtgctc ggaatgaatt tgctgtacat
      361 ataaaatata gcgaagcgga aagcaatgtg agggaattag gccacagcac aaaaacacct
      421 aatattgatt ttagctacaa accgtagttt gattatggcc cataaggtag aagcaagact
      481 ccccgagctt gtcatttctc atacatgcag cgatattagg aggtatcatc gctgaggaag
      541 gaagagccca gcaccaagaa aagtaagaga aagagaaaga gaaaagtaga aaatttagat
      601 tccctataac aaagatgaaa gaaagaaaaa tcttcatatt ttatcttaga ataaagaaag
      661 tttatttttc cagtcagatt gtctaggctt cacccaaata taaggctgca aagacagcag
      721 ttgttattat cgtgacataa agagacatct aagaggtgat tcaataaccc agacaacgag
      781 agcatccatt ctaaaagaca gctggaacag cgacacagaa tgtcatagaa aaaacattaa
      841 caatcaaaca acaacgaaaa ataaagtcca ccagagacca caacattaaa aata
//
LOCUS       KCKM01001640             606 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25904apa ultra-conserved element locus
            uce-1965, sequence.
ACCESSION   KCKM01001640
VERSION     KCKM01001640.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 606)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 606)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25904apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>606
                     /note="ultra-conserved element locus uce-1965"
BASE COUNT          181 a          141 c          115 g          169 t
ORIGIN      
        1 atctgactgc cgctccgcac tcggctcctc attaactggg cggcgatcca agttcatctg
       61 ggccccagag aaaggcaatg cttgtgttta gaccgcacaa tactgacata acattaacag
      121 atttacatat gcaaaactgt gaagcaacag gcattccccc tcaattgacc cacagcttgt
      181 agtggctgcc gagttattcc ctgcttaggc tctgtaacca agtgggcgtc atgcgactac
      241 catctgggta ccacttattt aaagctggca gtctctctgt aataggcaag ctggcaataa
      301 gcaggaaggg aataaattgc atcatttagt taacatccac ttgctttgcg gctgttaaaa
      361 acccatgact gaataataat ttggttattt cttttgccag acaatgctgt cagccaaatc
      421 gtactacgca tgctgcaaaa cgtcagcttg caaaatttcc actttaaaaa taaattaaag
      481 aaatttgcag tataatatga gctaagaaat ttttctaatg ctagcaactc ggatgcaatt
      541 gagtcctaaa aataaacttg cactactgta gtcaccaggt tctgcttttc tccaaaatac
      601 tccagt
//
LOCUS       KCKM01001641             375 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25920apa ultra-conserved element locus
            uce-698, sequence.
ACCESSION   KCKM01001641
VERSION     KCKM01001641.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 375)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 375)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25920apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>375
                     /note="ultra-conserved element locus uce-698"
BASE COUNT          117 a           65 c           59 g          134 t
ORIGIN      
        1 cgtgagagat cttaaagaac tgttctgatt tttctttttt tccgaaaggg accattgcaa
       61 cttttttttg gagggagaaa actgatgtct tctatgcatc cgattcttaa caaagctgca
      121 gggagcttga aaaaatgcag actgtacaaa cgcttacaaa taactgaact gacttaagat
      181 cagagtttac ttttcagatc aaattgttta tggttttaca aatgtgattt ctacttgcca
      241 acattttttt ttgtaacttg ttcccttata cctccttgat tgaataccag acagcctaga
      301 cctcagtaca aaaaggtatt gaaacatttt tgatacataa cagacctcag tcttttttaa
      361 aaattaatat atttt
//
LOCUS       KCKM01001642             874 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25935apa ultra-conserved element locus
            uce-6831, sequence.
ACCESSION   KCKM01001642
VERSION     KCKM01001642.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 874)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 874)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..874
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25935apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>874
                     /note="ultra-conserved element locus uce-6831"
BASE COUNT          275 a          179 c          165 g          255 t
ORIGIN      
        1 ggagagatga tctttctttc attgaagtca tttgaggggt tcgagtggca agagcctgtg
       61 ggataaactt ttattagggg aggggaacgg gtgtccattc gtccaatgtt ctgtaacgcc
      121 tctcttgcag agtttactgg cataaattta cagccattca aaccactcac cgagtcgcag
      181 cagaactcac ttctgctgaa gaggtgctga agcactagtt ttaacaagag gtggaaaggc
      241 aacctaaaaa tactcgtggc caccgcgtca atcccacaac acggaagcca gggaaagcca
      301 gctctgtacc atgtctctga catgtaaggg aggggacaac ttagaatatc cccctttcta
      361 tcttcatgct gtatctagtg ccaacaacat acacattgga ctcttaagca ctcttcttgc
      421 ctttcctagt attacagata atttgctagt ttcagagtgt acttattaca ggactgtcag
      481 aggagttttt gtttcaacaa cacgttaact ttactgcact tataaaaaac attatgtgtc
      541 ccctgtgatt ctgtgtgttt aagagcagcg aaatgttatt gatcccagtg tgacaaatca
      601 agagttaggt aatgtctaca aaactcaatt ttctgcaaga cataaaaccc tttttatgaa
      661 acccttcctt aagaaattca ggaaaaaata cacacaaaaa attagagcag aaaggtcagc
      721 aactattttt ttttaattaa tgtaatccaa ttctagtcta atgacaggca tatgaccaca
      781 gaggccaatt taaagccata tttactctca ctactgtaaa acagtatgtg aaaactcctg
      841 atttctaaaa tcactttgat ataattaaga atct
//
LOCUS       KCKM01001643            1001 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25951apa ultra-conserved element locus
            uce-6019, sequence.
ACCESSION   KCKM01001643
VERSION     KCKM01001643.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1001)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1001)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1001
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25951apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1001
                     /note="ultra-conserved element locus uce-6019"
BASE COUNT          280 a          216 c          288 g          217 t
ORIGIN      
        1 gagcagggac catatggaag gtgctgacaa acgaggccat tgaagcaaag gctgcaaatg
       61 agtttagtag acagccagac attttgagga ggggggaggt ggagggggga ctggaggaga
      121 gcgggagaaa gggagagccc ggcgctgaga gggacctgcc ggggcacacc agcgtggtgg
      181 gcagcgctct ctttcccccc accctgcacc ttctcccagt gccctaactt taagatccct
      241 caaagagaag aggggaccaa agtgtcgtgg ccccttctct gcttttaatt acttcccatt
      301 ttaatcttga tttgcacgtc gatctctcag aactgggcca gggactctac aaagccctcg
      361 tcagcaactc ccccaataat aaacaggaaa aggcttaagg ggcaaatcac ttgcatgtta
      421 atgagactgt ttgctggagt caagagagaa aacagcaaac aaacaaatgg actgaattcc
      481 agcggcagct gtttgctcct taatctcggc tcgtcagagc tgccctttga tgggacacaa
      541 tctacacaaa cgattgtgct aaatcttcta atctacgtcc tcattattac atcccttctt
      601 acgcatgtaa atcagggaca aactcatttt aatatgtaga tagattatgg aagggaaggg
      661 gaggggattg gaggggaaag gagctgctgg tggtgtctgt gcttgcagtt gggaggggtg
      721 ttaatgagga gcgaagggag gggagctgtc tcacagaccc ccagggtacc aggaggagga
      781 ggaagaggag gacctgttgt cagagcaaaa gggggcgtat aaagggccaa ggactgggat
      841 aagtgctggg atgctggaga agacacaggc acagggtagc attggcaagg tgataagagg
      901 acctcaccct ggcatccccc caaggcccac tgccttcaaa caaatatcct tagtgctatg
      961 gttatgatct ttaataatat tcaaaatagt tacttttaca a
//
LOCUS       KCKM01001644             939 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25967apa ultra-conserved element locus
            uce-3490, sequence.
ACCESSION   KCKM01001644
VERSION     KCKM01001644.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 939)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 939)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25967apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>939
                     /note="ultra-conserved element locus uce-3490"
BASE COUNT          249 a          158 c          240 g          292 t
ORIGIN      
        1 agagctacat accaaggagc tcgagaatgt gtctcgttga gagcatcctg aattttagcc
       61 cttgtgcttt tcctgtttca ttatgtactc gcaagaggga agatgaccca tccgtaggtt
      121 tcatctgtgt tattcaggaa gcagcgtgta aggaaatttt tggcttctta aaatccttgc
      181 ccacgatttt aggatcttct agaagttgtt ttttattcac accagcatca agtctgaatg
      241 aaatacagaa gtaagatgga aaactcacag tatattaccg tgcagctttt tcatggttcg
      301 ctttcctcct ttgcctttta cttgagggca ggactagggt agagaaataa tttttgttcg
      361 cttctgaaag gttacagtaa taaagaaact cttgttaaca tcagagtata tggcaggcag
      421 gagttttcac agtctggcat tgtttatttt accagcaatt tggaaccttc tgcactctta
      481 aaatattggc aagaaaatat ttagctgtta actattctgt ggcatgcgtg tgtttgaagc
      541 cctggggagg aggagtgctt ggggaaatcg ggtttttctc agcttatgat tgaaaccaga
      601 aggtgcagaa tattggtaga aggtgaaagc aatgcgactt caaattagaa ttttacccaa
      661 atgtggaact gatgggagag tgtcaaacag gtcacgtatg agcagggctg agcttggaaa
      721 tagtgggaag tctgacggag cgaatgcaaa tcaggtactg caggtgtgaa tttgggagtg
      781 aggtagcgag agcgaggatt tgcgtttgtc ctgccctcag tcactggcta aaggttgttc
      841 ggtgttagca tcgaggatga ggcttgctca ttgcttactg gttgggtgga ttttagcagt
      901 tgtcactcca ttttgaaatg aaataaactg cttttctgt
//
LOCUS       KCKM01001645             636 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25981apa ultra-conserved element locus
            uce-4102, sequence.
ACCESSION   KCKM01001645
VERSION     KCKM01001645.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 636)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 636)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25981apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>636
                     /note="ultra-conserved element locus uce-4102"
BASE COUNT          191 a           90 c          114 g          241 t
ORIGIN      
        1 ttttttcctc tctaatcaaa gggggttcta agttcttcct ttatggctag aacagtaata
       61 aatgacgctc ctgtatctgt aacgtaagta ctgctgtctg tcagtaatga actttgcaac
      121 tttgttttcc aaagtacatt ttattttgat ctgtccagta tattgcacta attcttttag
      181 ttattttcat tatatgaaat ctaccaagtg tgtcagaaga gatgaattag tctatttaaa
      241 tgttgaactg atagcagaaa cttacttgtg cagattttaa atttgcagta atctgggttt
      301 agcaaggaaa atggcagttc accagtgttt agttttatat tgaggtgctc aggtttgaat
      361 aaagtggttt aaaaaatttt ttattactgt tttttattga gagtttcaca aggttttact
      421 gcatttgcat agttctagac aagatgtctg atttattata tgggtcagca tttaagatga
      481 ttacaaataa atacatgaca cagctcaata taagctggta ctatatgtac tgtgacactc
      541 tggttatcct atgataaatt cttaaatgtt aaggtaattg ggtatcttat cgcacccatt
      601 tagaagtaca atcaaaacgg tgatattatc tctgga
//
LOCUS       KCKM01001646             751 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 25996apa ultra-conserved element locus
            uce-149, sequence.
ACCESSION   KCKM01001646
VERSION     KCKM01001646.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 751)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 751)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..751
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25996apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>751
                     /note="ultra-conserved element locus uce-149"
BASE COUNT          254 a          131 c          139 g          227 t
ORIGIN      
        1 aaactgaata ttttgttact gttggtattg aaaactatta aaaagtattt gattaagttt
       61 ttaaatcaat attataatca tttagtgcaa aatcacccac atttaccagt caatttaact
      121 catctggtat ctcacacaac caacacaata tgcaagaaac aactgctggg aattgtttca
      181 gatgctctaa agtatgttaa tttccaaagc aaaatgactt gtgctgtgaa ttttaacgca
      241 cttgaaagcc tgtactttct ctcgttctgg agcacaaatt ttgcatgtct gaagagctgt
      301 gattcatctt aagaaaaccc atcttgtgtt aaatggaatg gaaactggac taagtggtca
      361 aatgacaagt acattcatat tcaagctgta ttataaatgc atgtacagta atttacgtct
      421 ctcagctacc acaaaaggct cttgataagc aggtaatttg ctaaatggac tcctttatcc
      481 aagtattcga agggcgttac aagaaaaatc tgcagaggca ttaatgtgac gtaaaggtca
      541 agcattgtga catacctttc aaataatccc gcctaacttg cgatatgatg aggaggctgc
      601 tggcagcact gttcagtgtg aagcccttga tgtgggtctc agcactaaaa gaagcagaca
      661 tttagaaagg aattactgac atgcttctga tacgataata aatggttgag caccaaggtg
      721 aaattataaa aactactgtt cgtatgttaa a
//
LOCUS       KCKM01001647             682 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26012apa ultra-conserved element locus
            uce-4223, sequence.
ACCESSION   KCKM01001647
VERSION     KCKM01001647.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 682)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 682)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..682
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26012apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>682
                     /note="ultra-conserved element locus uce-4223"
BASE COUNT          254 a          132 c          112 g          184 t
ORIGIN      
        1 aaaagataat taacacttaa ggactagtgc tataacctat ggagctatta ttcaaattaa
       61 aactaattta ttgcaaactt gtcaaaaaaa aaccaccaga aaaccccaaa accaaaaaac
      121 cccatactgc acaggcctgt cctttaatgc aactgttaaa ataatcttac aagagtctct
      181 gagcttaaaa agaagcacag actatattta acgtagtagt ataaatactt aaaaccctaa
      241 acatttggaa ctggaagctg aagtatgtaa agtgcttact tagatgatat gaataggata
      301 ctggcaaaca aaagcagcag tgtgctccta gaatgctgtg cttcaaggag tttccttggc
      361 aacacaaatg cagttccaaa agtagacaga actttcctca gaaaacatac tattaataac
      421 aaccttccgg aacaacttgg aacaatttga ctacttggca ataataatgc caagtgttct
      481 gcaaattaat ctaacacata acagttatat gtttctcctg cccataattc tcctgaactt
      541 gcggatggag tttctgcttt tggaggatac aaatttgcaa agcggttcca aatgctgcgc
      601 caacagagag agggttcaaa tagcagcagc ctataaggat caattaatgt gcttcatatc
      661 attttaactt gtaaaacaga tt
//
LOCUS       KCKM01001648             910 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26028apa ultra-conserved element locus
            uce-3138, sequence.
ACCESSION   KCKM01001648
VERSION     KCKM01001648.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 910)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 910)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..910
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26028apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>910
                     /note="ultra-conserved element locus uce-3138"
BASE COUNT          270 a          172 c          151 g          317 t
ORIGIN      
        1 aaagaagaat ccaacctaaa gttggcatgg ctatgtccaa gtataacaaa tactgcaagg
       61 cttgggtgac acaagtggtg ttttcacaat cagaggcatt gcctgccctg cttctaccag
      121 ataaatctgg tacctccctt tctacagact aatctatcgt agtgtgcata aaactgagct
      181 cagtgttatg tcttgcagtt actgtatctc taatgtcaaa cttacattaa tcagcttatt
      241 agatatggca tagattgtac ttcaaattta ttcacaattt tccttgactt tatctggaag
      301 acttggtcca atccatatta tgtcttacct tttggctgtt aacattgata gcatctcttt
      361 ttattgggct cttgatgccc actgatgttt tatgcataat gatgctcaag tttaattgag
      421 ctgtaagctt cagtttaatt atgagccttc atgatacctt cagcactttt tcttctctga
      481 ttactgtaac tggttctctc taaccccttt aaaatcctta atctattaaa ccacttgtag
      541 acaagtcatt tttaggagaa agtctaatta gactattgca attatcttaa tgcatcctta
      601 gtatttagga aaaaacaacc aacctgagca aaaagcactt tgtggtatat tccaaatatt
      661 cacatgcaat gatctgattc acactgcgtg catcttgtgc ttgagacgaa tttatgtgaa
      721 gaaagagaag tgaaactcaa agaagtcatc tatttgggta aatttttgtt cattaaattt
      781 cactcggaat ttaagctgtg agtttcgtac ttactgtttc atcctgctcc tttcaatgtg
      841 tgaaattctg ttgctttcag tttcagagtc aaaggagcaa ctaaaaaaaa gtcattgaga
      901 tacataaact
//
LOCUS       KCKM01001649             668 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26044apa ultra-conserved element locus
            uce-7859, sequence.
ACCESSION   KCKM01001649
VERSION     KCKM01001649.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 668)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 668)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26044apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>668
                     /note="ultra-conserved element locus uce-7859"
BASE COUNT          227 a          121 c          109 g          211 t
ORIGIN      
        1 acaataccgc agtttgtttg tgggcatgaa agttaatttt aatgccaatt tttgtacctg
       61 agatactgta aatgagtgtc ttcaacttat attgcccatc gtaaactttt ttaacccatg
      121 agtcattttc aaaataataa acgtaactat tccataaaaa tatctcaaca cagaagagcc
      181 agaaaagtga aggacatgaa cagatggcac atcaatcttc tgcatttata caatttgttt
      241 tttaatgcaa atagtgtggg ttgcctgctc ttgccttgga tattgttcca aagacgagca
      301 cattttctta tctttctgga tcaatgtgac atttgcagtt atcataaagt gggagcccat
      361 ttaatgatgt taatgcttcc ttaatgtaaa aataaaatca cctcctttat aaaagcaaac
      421 agattaaaag tcccaaagag accattgaaa tctgtgacat ttgcagttac tggtagctag
      481 atggcttgat tatacacagg taaaaaatac cttgaaagca ttgtttacgc tcattaatca
      541 gaacattaaa taggaatgct ggagtctcct cagctaaaat cagtttcaaa aaacttatta
      601 attatggaga catcctttcg tacagcctgt ttagacggtt cccaaaactg caaacaacca
      661 aacttatg
//
LOCUS       KCKM01001650            1056 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26060apa ultra-conserved element locus
            uce-7857, sequence.
ACCESSION   KCKM01001650
VERSION     KCKM01001650.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1056)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1056)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1056
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26060apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1056
                     /note="ultra-conserved element locus uce-7857"
BASE COUNT          270 a          222 c          275 g          289 t
ORIGIN      
        1 ctgttgctgc aatatctaac actgctaagg agaatcacat ggtttttatt tatgggccac
       61 taactattct gcgatgggtt tcgaaacggt acatggccgt actaatagta cgtgcctctg
      121 gaaattaaag agtaagcctc tcgtagtcac tctagtacaa gcacgtcatg cataatgctc
      181 acgttaaaag gtgttttgct tttgttcagt gtttgtcagg ttcaactcca gccatggctt
      241 cccagtggag gttggtccag acgccagcat cctccagctg aaggaggtgg ttgcccagcg
      301 acagggggtt ccagctgacc agctgcgggt gatttttgca gggagggagc tcagcaatga
      361 cttgacactg caggtaagtc tcccttggta gcttcccttc tggacggctg ccaactccac
      421 tgccgctgcc tctaatgctg ccaatctgac gttcatgcct gagatctaat agaaaaaata
      481 gtgtctaggg attccttgaa ctttactcca cactgcttca ttaattctga ccttcttaat
      541 tatgcattga aacagcaagc aggaaggata ggggaagaga gaatatgaga gagagcgcac
      601 gagagcgagc tgtgcctggt gaataaatgt ttactgacta cagaagcaag ccatgcacaa
      661 tttctgtatc tgttcaattt ctatcttact tattccattt gaatcttaat gaagaaggat
      721 gtgaataaat tgctctaaat caggctgcac agtcatcaca tttcatggaa tttgtaaccc
      781 aattgtgacc cctgggggat agctacaggg ctgctgcttg ggtgctgctg tgcgtgtgcg
      841 caggtgaacg tgctgctgga ggggtggttc cagaccggaa tgcttacaga agtgtgctct
      901 gaaccactga actcatgaat gtgtgaggct aagagagaag cagggagcat ggaagagcag
      961 ctataggtag gtatctgaat ttcatctcct gaaggttagc tgactgttgt cttcaagaaa
     1021 tgcagagggg ttttcctccg tggtgagcag tagtaa
//
LOCUS       KCKM01001651             248 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26075apa ultra-conserved element locus
            uce-8026, sequence.
ACCESSION   KCKM01001651
VERSION     KCKM01001651.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 248)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 248)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26075apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>248
                     /note="ultra-conserved element locus uce-8026"
BASE COUNT           74 a           33 c           48 g           93 t
ORIGIN      
        1 atacactaaa ggcttataat tttttttctg ttggccacat ttagctgttt agctaggcag
       61 aaatttaaaa attctactgg catgtttgct gggaataaaa aagcctgtag gtcaagtctt
      121 tctgagagaa tgccaaatgt ctttgtgtcc agttatttat ggtttcagat aattgtacag
      181 aaaatatcaa atttgcatag tgtgattatt gctgattatt tatctagcag tcaaaatgtt
      241 tcagtggt
//
LOCUS       KCKM01001652             726 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26090apa ultra-conserved element locus
            uce-4732, sequence.
ACCESSION   KCKM01001652
VERSION     KCKM01001652.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 726)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 726)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..726
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26090apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>726
                     /note="ultra-conserved element locus uce-4732"
BASE COUNT          235 a          156 c          133 g          202 t
ORIGIN      
        1 aagtgagaat aatctaatac actgtccccc tggtaaaacg cgaggccttg ggttccgttt
       61 ctattcaggg ctgatttata acccaatgga aacctgatgt aaacatatga tcaatgagtc
      121 ccatcattgc tgataataac ccccaaccgg cccactccct catctcaaaa gccatccctt
      181 taggctatta gtttcgtcca gctaatcctc tctactctct ctgcctgctg cttttacctt
      241 ggccatccgt tcagtccagc agactcagaa gtaattttat acgcagcaga gagcgggtgg
      301 aattgatttt tcactcagag ctcagttccc atctgaataa ttatcaattt tactgcctca
      361 taaagggaag agtcaaaatt tcaaatcaat tcaaaagagc ttctgagact acagaaactg
      421 tgcataagaa taaaggtcaa agttgtcagt gacctcggga gatgatgtca gatattagta
      481 cactgagtag ttgacatcag aggcactcag tatgatatga ctagtgctaa tgcaaatcat
      541 atttatgctg actactggag accagacatt aatatttaaa agagtacgtg aaagcttgca
      601 ttcaaaataa atacatcata ttctgcagaa cctgaagtta ataaagacag atcactgcct
      661 agtcatatgc tgtgaagtga aagattatta cacattaaca gacgaagtat tacatcaaga
      721 ttgcca
//
LOCUS       KCKM01001653             584 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26105apa ultra-conserved element locus
            uce-819, sequence.
ACCESSION   KCKM01001653
VERSION     KCKM01001653.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 584)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 584)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..584
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26105apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>584
                     /note="ultra-conserved element locus uce-819"
BASE COUNT          177 a          115 c          109 g          183 t
ORIGIN      
        1 tttttttttt ttatcaaacc tctccaaagg gactcatcat atgcggggct ctatgaagag
       61 aaaaagaaga gcattgtcct tatcacctcc ttccagaaag tggcagagta ataggacttt
      121 gtaaggcgaa atgaagccca gtctgatggc tgctgattaa aaattgactc tgccacatca
      181 aagaagagtt gaaggtgaaa atgatgatca cttccctctc ccagggaccc tgcaccattt
      241 cttttattca accttgaaag gttctttctg aataagataa tatccctcga gtccattctg
      301 gctaggcggc atgggaaaat gtagatcagt atgcctattc tctatgaaaa aatgggattt
      361 tgttaatgac atagcactct aaagtgatgg cttgtatatg gtaaatgctg agaaattaat
      421 tataaaatgc ctcttagact acagatcaaa ttaattgcta gtatacatct actaaaaaga
      481 ccactgtaaa cccagactgc attttctgcc tcattgctgg agatttctgt acttgaaaca
      541 gtacagcttg cactgccttt tctgttttta catcttttat tgca
//
LOCUS       KCKM01001654             660 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26121apa ultra-conserved element locus
            uce-4, sequence.
ACCESSION   KCKM01001654
VERSION     KCKM01001654.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 660)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 660)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26121apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>660
                     /note="ultra-conserved element locus uce-4"
BASE COUNT          223 a          115 c          121 g          201 t
ORIGIN      
        1 ttattttaac aattaccttg aatttcagaa gactctttcc ccttcacgtg aaggacagtc
       61 tcccaccctt cataaagaag gtatctgtta caacatttgg aggtgactag taggggtgaa
      121 agctgagttt catttcttag agattcttca gaatgaaacg aactatatct aaaaagtgca
      181 gatatgcttt tttatttctt ttgcagttca ggggaggggg aagggaaaag catctctgat
      241 ttgtatatta aagcacaagc atctgtccta ctgatgatat tctagggaag cacattagca
      301 taaaatttaa cgatgtcaaa taagtggatg tgaaataggg actgcgtaaa gacactattt
      361 ccaagcctga cagaaacatc actgtttaga aatgcaaatg aaaccattat gttcaataat
      421 tatatgaaaa tatgaacagt tcagcatgtt ttccagccct gatggcggtt aatgggatgt
      481 acgcttatgt aaataactac tattaaagct aatgctgaaa aaaactaata aattcatact
      541 aaagcaactg atttagtacg cttttaaacc ccagcagtgc tcacttatta gaaaggagtg
      601 cattcttatg tttagaactc attactgtta caagtcactg caactccatc aattaccatg
//
LOCUS       KCKM01001655             811 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26137apa ultra-conserved element locus
            uce-3910, sequence.
ACCESSION   KCKM01001655
VERSION     KCKM01001655.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 811)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 811)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..811
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26137apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>811
                     /note="ultra-conserved element locus uce-3910"
BASE COUNT          265 a          138 c          147 g          261 t
ORIGIN      
        1 aggaatgtgc tgtgtattca aacagatgca tagtgggcac catatgctcc tttccaacaa
       61 ctgctatatt gctgcattac agttcaaatt ccaagtatcc aaggatgtaa atatattaaa
      121 caattggtct atttgtgcaa agcattctta tgaggggtat ccacgtgctt ttaatcagtt
      181 tcatgcagag caagagaaaa ttgtaaacta tgcattaaag gaagatttag tgaaagttat
      241 ttttcctcta tcttcggcat cctaattcaa tgcttcccct tgctttcagt ggtaatataa
      301 ataatcttct agcaacattc atgaggaaag tttgatgtgg atttacacta gtggagatac
      361 attacaatgg gtagatttaa ggtattatga aatgagtttt tggatttgtt acagaggtat
      421 gaaaccccta agacacagac atgtaggact tccaacacat ggcaaccact cttattacaa
      481 aaaaaaacag tgttaagtta aagtacctga ttacaattcg ctagtgctat gtagctctga
      541 tagcaggctt atatttaatg ccacagaaac aatatcattt atttttctgt cttcccttat
      601 cccttcatta ttgggtttgc aggctttgaa accttaagca aaaggacaag atacgaatta
      661 tagaaaacat caaagtatag tgaaatcaaa tgacattcca tacgatcctt acagagatat
      721 ctaacacatt tcttatgtgc agtttggtca aattgctacc actgcagagc tttagtggtt
      781 ataattagta atcttttggg agatacggaa g
//
LOCUS       KCKM01001656            1051 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26151apa ultra-conserved element locus
            uce-7840, sequence.
ACCESSION   KCKM01001656
VERSION     KCKM01001656.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1051)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1051)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1051
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26151apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1051
                     /note="ultra-conserved element locus uce-7840"
BASE COUNT          311 a          208 c          215 g          317 t
ORIGIN      
        1 gacgtgaaga gggcacttag tgagctcaca tccaactcag tctccttccc ttctccatca
       61 agtccttaac ccagaggaag gggcagatct tgcatctgca tttcaataat ctcagcacaa
      121 atgacctctc tgcttttaaa taatcccagt gcaaatgcaa aaggggagga gcagtcggca
      181 caagaggccg cagagcgacg gggatcgctt ggctctgccg gattgatgga gatgaggacg
      241 agccagctca gcgcaccttg gcttccacgc actggccgtt tatttcacgc tcttctctat
      301 ctagatgtat gatccagaaa gaaggaaaaa gtagttgagg tttaaactct tatcactaaa
      361 gtgagtctcc ctctacatta aaaaactctc cagacattgt aacaggaatg ggttcagttc
      421 ttatgtcata aatttgtgtg tgtagaaaaa agacttattg gtgaatttag cagtattttt
      481 cgttgaactg gcagttgcta accattacac cagtatttat ttgattctta aagagcacaa
      541 aagcatggac tacaaataaa gaagatggag taatagcttt tgactggacc actagcttta
      601 aacttgaaat gaagtgtcca cttttgagtt actgtgtcca aatgccattt gtacagtttg
      661 aaaagtgggg gcatttttcc agcttgtcac tgttagctgt agttcattcc agtgaatgat
      721 atcactgaag gagcagttgt tctgctataa gtacttcact catgactgga atgtattaaa
      781 tgtattaatc tgtgcctcag agtgtaattt agggaagccc tacatttgac acattcttgt
      841 acatccttat tttattgcct tatcctgcag gtaacaatgt ctcaaaagca aagagactgg
      901 atgaagttaa aattacatgt caccaaatat tatatgcact tttcgttgct catttcgctg
      961 tcagaattac ggattttcaa caacattagt ttaaatatgt ttatggcttg atttacacct
     1021 ctgatgtcaa aataaaatcc caggcaggaa t
//
LOCUS       KCKM01001657             766 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26167apa ultra-conserved element locus
            uce-1253, sequence.
ACCESSION   KCKM01001657
VERSION     KCKM01001657.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 766)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 766)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..766
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26167apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>766
                     /note="ultra-conserved element locus uce-1253"
BASE COUNT          205 a          144 c          150 g          267 t
ORIGIN      
        1 cagttttgat tcatgcaaac tctcagatag gatgagcatt gagtattatt ggttttaaat
       61 tgaccggtca tcatgtaagg tcctatcgtt ctaaatattt tatgagaagc taaggtttcc
      121 ctgaggcacc tctaataata aactttctgc agaaaattta gaaaggatta tgtgtttcaa
      181 ggaggagctg actgcttgaa gtaaattctc ttgttgagtc atttattccc ttaataggaa
      241 ttttctgatc tgctgtcatt cttgttcaca cactgggtgt cactgcctct aaaacacttg
      301 tcattcttta atggaaacaa aatagtcatt gcagtcagag ccgcaatgtc attccactac
      361 cccttgctgc gtcggcaata gtgaaaatga cagagcggct ctcagtaggg gtaattaaaa
      421 tgtaaatatt gatattttat tatttgaaat tactttccag tgcggcattt aatatctctc
      481 catctgtgcg gctctgttta gcggtcactt tagtgcagct ctgggatgcc aagcggcggc
      541 ttgatccccg ttatgtcaaa atgcttgttg ctgcttaatt ttgatatcta attaagtgga
      601 aaagtacagt ccacactgta atccatggca tcttaaccag ctgcttgggt atatttagaa
      661 ttaatctcca ctatggaatc atcctaatgt atgcaattaa gagtctgccg atggctaatt
      721 aggtgtatta gaatcaggca gcttcctttt tttttccttt cttttt
//
LOCUS       KCKM01001658             584 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26182apa ultra-conserved element locus
            uce-6955, sequence.
ACCESSION   KCKM01001658
VERSION     KCKM01001658.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 584)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 584)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..584
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26182apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>584
                     /note="ultra-conserved element locus uce-6955"
BASE COUNT          199 a           81 c          109 g          195 t
ORIGIN      
        1 atttggatta tgcccaaact gttgaatatt cagattgcaa tcaaagatca aaaggctcct
       61 gaagtgtgaa ggctgaaaat gaaaatttgg cagaatgtga taatccacat agtatttgtg
      121 ttattttttc tggagcacca gctagtaaat gtatgtttaa aatctgtgat ttttcaaaac
      181 tgcttctctt cttttccaaa aagtccaaaa gttggtagga aaagggcttt gtcatatcag
      241 tgggtttgtt ccgtgccaca aatttaatgt acgaggtcac ttggaatata atgtgtagtg
      301 aaagaatctc attaggctaa aatgaatgta aaatgtgtca atttgatcca aatgagaact
      361 gtagtaaaac catgtttgat gttcatgtgc aataaatctt taacatttgt ctgtaaagta
      421 ttagagaacc catagggaaa tctctatttg tgatagctgc acattttcaa tgatttttcc
      481 tataatcctt tgttgacatt tagcataagg taacagaaaa gaagatccta aaatgagaat
      541 tattacttat tattctaagg taaacaagat ggacaacttg cata
//
LOCUS       KCKM01001659             353 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26196apa ultra-conserved element locus
            uce-7190, sequence.
ACCESSION   KCKM01001659
VERSION     KCKM01001659.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 353)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 353)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..353
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26196apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>353
                     /note="ultra-conserved element locus uce-7190"
BASE COUNT          128 a           55 c           78 g           92 t
ORIGIN      
        1 ttgcagcaaa cagtgaatta tattggtgtt atatagctat ctcatcaaaa ggtagcaaat
       61 gcacaagacc ttttgcgctt ttcaatttga aagaaaatga tttcattaga aaaaaaagaa
      121 ccatcactct ggatgttgga gaatgccaga gcctgatgaa accagctgaa gagacaaact
      181 gagtgtacgg atgcagatta gccttcagaa gatgagggtg taaaagggat ttaatggtag
      241 gatggattat agaaatcctt gtaacaatgt taaataatta tagttccagc cgagatcaaa
      301 gcagtgctga ttgaaccccc tcaagctgtt aacacggagt atcttgaaga aaa
//
LOCUS       KCKM01001660            1076 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26212apa ultra-conserved element locus
            uce-4747, sequence.
ACCESSION   KCKM01001660
VERSION     KCKM01001660.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1076)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1076)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1076
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26212apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1076
                     /note="ultra-conserved element locus uce-4747"
BASE COUNT          299 a          220 c          234 g          323 t
ORIGIN      
        1 caagttgact ttccagtcaa ttcacccaaa ttccaacagg aattggttta taaattggtt
       61 ccaactggaa ctggtcattt ggaatttcca gcacaggaaa ttattttata agtgcctcga
      121 taagtaccct aaattacaaa cagatgtgtc taatatctaa caagtatggc tataaatgca
      181 aatgctgtac ttaaaaaaaa aaaaaaaatc caaaaaacaa cctgtatgat cgggcagaaa
      241 ataagggcac ggtcactttt ttgcccccta cttaacatca aatgacagca gagtgcaact
      301 tcggtgcaac cgcggcacat ccgccaaatt aagatgattt ttttgtgtgt gttggtttgt
      361 tcctagctac gttatggcaa gttatcgact gatgaatgct gtttttcccc aggttctcga
      421 actcaaagcc tgtgtcgtga ttcatggcta tatcctcccg gggatcctcg gttcctgtgg
      481 ggtttgtaag tgtcctggta tgagtcagag tattcttctt ccactagagg atagtgatct
      541 cggctgtgtt gggaactgga agacaagcgg ttcctgctct tccgagccct ttcgttgtga
      601 taattttcat ctgaggtcat taaacttcgt cgctcaactg gagagttctc tgcggagtgg
      661 ctgctgtgcc tcagacgctg gctctacgag ggccaaagaa tccaagcgtt aatagagaca
      721 cagggagcat gtgaacagtt cttagcttgt tttgagactt attctgaagt ctttcagaat
      781 ccatccactc tggcgttatt catcttaaat taaagtctgc acgctacagg aatgggttac
      841 aagcatagtc tggcttctag agctgaaagc ggaccaaacg caggaggtct ccaccttgtt
      901 aaatattaga ggccatttag catgaaaagt gagctgatgt attcagcatt tatcactttt
      961 ctctgatcat gaacataaca ttcatgcttc tagcctgctt agaaaaattt cggcatctat
     1021 ttgtgtgggt ttagaaaaca tctgaagatg tttttttaaa gggagccctg acgaaa
//
LOCUS       KCKM01001661             936 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26228apa ultra-conserved element locus
            uce-7611, sequence.
ACCESSION   KCKM01001661
VERSION     KCKM01001661.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 936)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 936)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..936
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26228apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>936
                     /note="ultra-conserved element locus uce-7611"
BASE COUNT          304 a          180 c          167 g          285 t
ORIGIN      
        1 acaaatagaa caggatgctc actctaaatt cttctgggga caggtaactg gttgaaaggt
       61 ggaaaaatta aaaagggtaa agaagccatg atgcatttat ctccttggca aacctattta
      121 gctctgccca tctaacaaga agttgttccc cacaacagaa acactaacat gctcttttac
      181 acctgggtaa tattttttta taagtcaaat gctgtcaatc tgtttgagca gtttggagtt
      241 caggagttca aactgaaaat gcttcagaaa atgtaatttt ggagagcaca ttttggctca
      301 ttaaaaacca gaacactggc aacatttgga actccgtagc tgactgaaag aaaaggtaag
      361 aggtgcctgc tatttaaggc aacattcagt ggctgccatg ctaaataatg tgtttaaagc
      421 acaatctcca tcagcagcaa gcattatgta gctaatttct tacatcattg ttcttttcat
      481 taattaacat ttctcaaccg ttagtgcaat tattgcagag cctctgtgct gtatgtctct
      541 tttcatgatt aataaggagc cattatattt ccctttcctg aagcagtcaa ttaacacgga
      601 atactttcca ttaattactg aatgtttaaa accagcatgc tgtacctgga gagcaatctg
      661 ctctaggaac ctgtgacacc aattgcttaa aaaagttctc tttaaatttt attccaaaaa
      721 cacaagcaat ttagctggct atattaattt gcctctgaag cagggctgtg aatgagaaac
      781 atcttttaat ctcatgcaag aaaaggcagc catctggctg ctgaggattt cagagtcaga
      841 ctctccctgt ctccctctgt aaatgcaggt cattaaagta atgtgttcat ctacataaaa
      901 ctcaaatgga atataaaagg taatatttat atacaa
//
LOCUS       KCKM01001662             812 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26244apa ultra-conserved element locus
            uce-6200, sequence.
ACCESSION   KCKM01001662
VERSION     KCKM01001662.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 812)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 812)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..812
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26244apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>812
                     /note="ultra-conserved element locus uce-6200"
BASE COUNT          219 a          161 c          151 g          281 t
ORIGIN      
        1 ccccttaaat atgtttacat atgtacttag atttcccacc atagcaacat gtggagccta
       61 taacatgatt tattctgaca gatattcaca gttgtttaat tcttcctttt atccacacac
      121 ttttgaatta tgaattatat caatccttaa atctttgttt gttttagaga aggttctttt
      181 tcctctttcc tcttggcacg ccatatatgc actagcaagt gctagcagtt tcagctgcat
      241 ttaaggaaat attgttgtaa ggcttttatg tgctgtactt caatcagcta gtgccagcag
      301 tatcccaata gaaagaccct caacagacca ttttcagcat tttgctgcaa ttaaactcct
      361 ctggttttag ccctcaggca atttagtacc tttttacata tgcacattat gaacttttga
      421 ccagggcctg gtagtcatat attagatagc agcttttgaa agcagactta acaagttcct
      481 cagagtatta ccgtcggagt cagttgtgga aaaggtaatt taaccaactt gcagtgaggc
      541 cattccgaat cttactgatg atcctaaata tgtctttttt tccttgtttc ctctggaagc
      601 tggtagcaag agctctcaaa gaatgtgatt gatcttttat tcagtagcta acgagggctg
      661 tgattctatt agtgctctac aaggcaaggg aacagtgatt taatgaagtg tctagtgagc
      721 tggtcataga tttatcctgt tgtctctaat ttgcagtgcc gttgtgagtg taaaagaaac
      781 tgcactcaca ctgccattag gcaggtattt cc
//
LOCUS       KCKM01001663            1189 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26258apa ultra-conserved element locus
            uce-3154, sequence.
ACCESSION   KCKM01001663
VERSION     KCKM01001663.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1189)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1189)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1189
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26258apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1189
                     /note="ultra-conserved element locus uce-3154"
BASE COUNT          310 a          269 c          203 g          407 t
ORIGIN      
        1 agaaatgaat taccgtgatt gatggggtat caaaagctga ttctttcatc tttacacatt
       61 ccatgattat gaagcagtct aatttaagcc ttgtgtagtc tgtctatcct gctccttgtg
      121 atggttgcac tgcataaaat tattaaacct ttcactttaa ttgcaaaaga taattttcca
      181 ttactggtat gtgcaactta aaagggcact tctgtcttcg gaggtaacac gatattttta
      241 aatgaatgca ttatgcatta agtaacctat ttcataaact ccattttagt tcgaataaat
      301 tggcttctaa tttagcaaga ctgaatctag agttagtatc tttttctttt atttctttac
      361 ttttttcttc tttttttttt tcatctctag tacgtagctt taggatgtta gataagtgcc
      421 ttctgaaagt gaaaacagta aatatgcact aaataaggaa cagcttgctc tggagtctga
      481 attctttagc ctaatgtcga tccactgagt tgccccgttt ctctctgctc agctggacca
      541 cgggtttacc atcaagagat cagggtcttt ggactactac caacaaccag gaatgtattg
      601 gataaggtat gagatggtgc agcgccaaca gtcagtgttt ccatggcaac gtgctggcag
      661 tctccattaa ccagttcctt cagtggataa acatgctttt tgatttgtta tccggtccat
      721 atgctgcttt atcagtttcg ttttaatctt gattgagatg ccacaccccc tcattccctt
      781 tcttcaccca tccctcacac ccacattgcc agctttctct tcatcgcaca tgctccctat
      841 caatttcccc tatagttaaa aggacagtgt atatagaaaa tctactagat atgctgaagt
      901 gcgcaccctc cccctccctt ttgcttgtta aggcatctgc ttccccctgc gctcctgttc
      961 tgaaacacac ggagcagcaa caggctctca gcatatattt tcctcttttt ccatgcgaga
     1021 tgtggagcta tatactgtca ttttaaaccc accaaacaca atccttacct tagattgaac
     1081 aatgcattta cataacgcgg gccgtagaaa ctctcctaag ttcaatgaaa tacaatgcat
     1141 tgtgtgtgcc ggtaagcttg tgtttctaac aatgcattcg ttctctttt
//
LOCUS       KCKM01001664             862 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26274apa ultra-conserved element locus
            uce-3238, sequence.
ACCESSION   KCKM01001664
VERSION     KCKM01001664.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 862)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 862)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..862
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26274apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>862
                     /note="ultra-conserved element locus uce-3238"
BASE COUNT          265 a          139 c          156 g          302 t
ORIGIN      
        1 tggtggtatt gatatctttg ggctcttagg aaaaaataaa agggtttttg gccctctgac
       61 tttaaatctt tgtgctattt gtagccaaag taccatggca cactcttttc gaggttgatg
      121 acatggtagg ggcaaaaatt aaatcatcta ctaacttttt acattttgca tttagtttgg
      181 acacctaagt tgaccatttc tgctatatgc atcagttcat taatacatga aaatatgcta
      241 tcaaacagac aatcaaattt catgtaaaat aagctccagc attaaaactg ttcctagtat
      301 tttatgtgta actctgtggg tagatatatt tcttgctact agagcaaaac tgatttgtgt
      361 gatggttccc catcatgaaa tcacttggaa ggttgtgaga taaaatgtcg cttaggataa
      421 tgtaattggc cttaaggtac aggagttgaa ttattttcag tgatttataa tctggaaatt
      481 aaagactcac tcattttcta atttaattcc atcttcaatg gaaaaatgtt cactctgaac
      541 taaattggcg agtaatgttg ctaattcaaa tgcagatgca atttcgattc tggtagcagt
      601 ttgctgtgat tgacgagtcc ccaatggatc ataatgattc ttatctccca atctcacaaa
      661 ttctctagca gttgtgataa taacttcagc taaggagaaa agggaaaaaa ataaattctc
      721 ttctgtactg tcaattcagg ctttgctttt ttctgacatg gaatggggtt tatttcaaat
      781 ctattgcgtg ttggagacaa atatgaagcc tcattactaa attctgtgtc atcataaaac
      841 cacagtttaa ttgtttactg at
//
LOCUS       KCKM01001665            1042 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26289apa ultra-conserved element locus
            uce-1983, sequence.
ACCESSION   KCKM01001665
VERSION     KCKM01001665.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1042)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1042)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1042
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26289apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1042
                     /note="ultra-conserved element locus uce-1983"
BASE COUNT          307 a          187 c          217 g          331 t
ORIGIN      
        1 tttttctgta tagtaaatgc atattggttt gtgtgtggga tattttagca tagttctagt
       61 aaaacaagat aagagtacca tgtgttgaag gaagtatctt ggctaaatga cctagggcaa
      121 tgaccacatc ttccttttat ttggtgctga atagttgctt ggaaatattg agagtaaact
      181 aaactggaaa aatatgtatc ttggtgattg gtggttcctt cagatgttca gcttcaaatg
      241 cacaggtgtt gtttttgtca gaggaatgct gcctgattcc tgctgctgtg taattcacct
      301 gcatcaagat taagaaacca ctttttatta aataagctcg gaaacaagat aaatgtattt
      361 tgcttttgtg tagtgtgtat tcgatatctg tttttctgat gagtgcttaa aacgttttct
      421 agtacaattg gaaggaatgc attctctctc gtataaaagc aggacagccc tgaaatagtc
      481 ctccttaatt ttggtcagaa tgaacaaaag tgtctgtgtt tattcctgcc taatgcatca
      541 caaatctgct gacatgctaa ccttggagtc ttggctggcg gtaatcaggc ctgtgcaccg
      601 gcaggaaaga tgtacctaat gcactccatc agtgcagttt acatatggaa gttctcacag
      661 gggagctgcc ctgtgccagc tgagggttac ctgcccactg cagttattgt atgtaattat
      721 cgaaccaatc tgttcagccc agcagggttt agatcgtaat catgaagcaa cactttggaa
      781 aggaaagatg taaggcactc tccccttctc tcgtcagctc tgtgaagttg taagcacttt
      841 taaagctgta ttagtaaagc tctagtctca cacaaaaaaa atagaaataa aaaaagataa
      901 actcttccag cgttcatcaa agctatcggt gtctgataca gatgtgggtc agctcatcct
      961 ttgcaaaaat caggtggctt aaaaaataat tattctataa ctaccttaag aatactttcc
     1021 aatagtaaga ttaattgtgc ta
//
LOCUS       KCKM01001666             448 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26305apa ultra-conserved element locus
            uce-2176, sequence.
ACCESSION   KCKM01001666
VERSION     KCKM01001666.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 448)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 448)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26305apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>448
                     /note="ultra-conserved element locus uce-2176"
BASE COUNT          116 a           90 c          101 g          141 t
ORIGIN      
        1 ggatgatata acattagtat agggacctgc tactccgttg tttggcaagc tgaggggcct
       61 gtgtagtttc tacccttcag tgcatcagag taagattcca gcaaaaacac atgttaatgg
      121 gggaagaagg gagggctggg tgttcagctg aatgaactta ctgttacctt tttttttcta
      181 acataagtcg tctttttccc gatactgtct gaatttgaaa catctaattt aatacattga
      241 agggccccgt cttcctttta tttcctgtct gtactgaagc agtcgcctgt ttcaattatg
      301 actttctcca gctcctacat ttttcgtgct ccagctggct caaagtgcac ttccttggaa
      361 ggtaaaatgc actaactgtg ctgatcagag actgatagct ggaaagccac aatatttaat
      421 agctgagctg ataagaggag gggttaac
//
LOCUS       KCKM01001667             583 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26321apa ultra-conserved element locus
            uce-1636, sequence.
ACCESSION   KCKM01001667
VERSION     KCKM01001667.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 583)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 583)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..583
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26321apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>583
                     /note="ultra-conserved element locus uce-1636"
BASE COUNT          179 a          151 c          112 g          141 t
ORIGIN      
        1 tcttccagtc taaaaaaaac caacaacctc ctaatgaatc ggcgaagcga tctgagcaga
       61 acgggactga tgaacacatg aaagcaacag acagcaaaaa atgcaaccac tttcgccaat
      121 aaacactaga tcatttaagg gaagtccctc aagagttgct gcttcctgat tgatgtaatc
      181 ttaaccacag cctgtggtcc aaaaattgcc aatcaatcat gtatacatta caggaaaaat
      241 tgggttaacg tgtctgcacg ccggtgcgtc agcaatgttc tgctcaatgc tggcacaaga
      301 tctcctttga agaaaatcac cctgttggtg tatcatgcgt ttgttttcac ctcaccattt
      361 tgttatgatg tataggcaac aagcctcatg tggccttcct aatctgaaaa cgagccaaga
      421 gaaagaacgt gcgcagaagt gttgaaagaa aggcctattc tctgcctagg gaactgcagc
      481 taatacagga aatgaacaca agttttctgt aagccgtcca gcttctgaat cagctgttcc
      541 tcgctcaaaa tctccttctc ccaccccccc caacacccgc ccc
//
LOCUS       KCKM01001668            1145 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26336apa ultra-conserved element locus
            uce-1120, sequence.
ACCESSION   KCKM01001668
VERSION     KCKM01001668.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1145)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1145)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1145
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26336apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1145
                     /note="ultra-conserved element locus uce-1120"
BASE COUNT          341 a          193 c          233 g          378 t
ORIGIN      
        1 ctggcagaga ttgttcaaag tactagtttt cagaaacaga aaatatctct attcctcttg
       61 ctttaaagag ttagaaaatg gctaaaatca ctctcacaac aggtctctta aatccttctc
      121 ctgtcaaggt ggaggactat gttgacccgt gtttatttag tgtgtgtatg catgtctact
      181 tacaaaatgc ttttgggtac aactgataat acaatattaa gaaactttat gttaaaggta
      241 ttaaataatt gaatgcacag tattctgtag actaattcca actggtttgc ttaaggcaga
      301 aagcaaatgt aaacagcatg agatgtagat gatagattat tttttctttt gtatatgatt
      361 cttaatattt actatatgca gtcatataag atgctaattt taaatacttc tttagctgta
      421 agaatgcatg tttgctttct cttgaatcac acagaacaga tggatgcttg actgcctgct
      481 aatccacagc tggaatggtt tcagccgttt ccacgttgct gggttagagt ggcttttcta
      541 gtggactgag agggcagcaa gagagggata tcattattca tcagtatccc agtgggatcg
      601 ctgccagcag agattaattt tttctgttat gcttgtaaaa caagctcagg tggagtctct
      661 aatcctcagg gcacgggtgg cagatcaagg aagatgctac aaagctagtt aattttcaga
      721 ttctagggga aacagaagct ctgttagatg tataaataca tgattgcaaa tttaagtagc
      781 tcaaatccaa atgggatctt cctagacatc tggtacagaa aatctctgtt ttctttgtct
      841 tttaaaagaa gttcttaaaa ctttacacca gaggcaaaaa atctgcaaca ctcttaatcg
      901 ttagttgcct ttccgtttta ttttttttaa tgcagctctt acagtgtatt ttagctgaat
      961 gcctttattt acaggtggaa gaggtatggt ataagtctgt gtaggaacac tgctttacag
     1021 tagtctcaca aatttgtgtg cagtgaacat cactgaggaa tattatcact tgccatccaa
     1081 aaaagggtta gatctgccct aggaatgcat ggtgcatccc agttagcaaa tggggtgtcc
     1141 tgtta
//
LOCUS       KCKM01001669             752 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26350apa ultra-conserved element locus
            uce-1719, sequence.
ACCESSION   KCKM01001669
VERSION     KCKM01001669.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 752)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 752)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..752
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26350apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>752
                     /note="ultra-conserved element locus uce-1719"
BASE COUNT          271 a          135 c          126 g          220 t
ORIGIN      
        1 ttttctctta caaacaagca tatgaattag aaaggaaaaa aaaaaagatt tacttccaca
       61 gcatttcatt tcaagttact ataacctaca tatttgccaa ccagaaaatg caacatgaaa
      121 aagcataaga cagtaaaact tctggcacgg caatagtatg tagccacaat acacgttata
      181 gacacattaa aaattacaaa agctgcagaa atattcaatc tgtatggata caaactacta
      241 tgtttacaat gttacggtaa cttattctac tagccagaaa taataagcat aacatgtttg
      301 taggcatgca atcatgaact gataaaatag aatttattat taactaaaga aaagcatgta
      361 aaacctagga tgagcactta gccacctcag ctcatctgaa tatattcaag gttgggtgaa
      421 actcattatt caggactcgc agccttgata actttgattt tcatccatcc atagcatggc
      481 caaaaggtac catttaatga agtaccattc agagagtaaa tggggtcata taatagacag
      541 tgcggttgca ccttgtgttc atgtactgat agctgttaag ggtgcagtga tgaaccaaca
      601 gagctcattt ctccttggta ataaattcat gctattaata tttatcaaat gtgtgggccg
      661 tctcaactga gccactgcac atgagaccat aaatctctac tatcatatca attttgaagc
      721 ttcttttgta cagtgtataa attttaaggg gg
//
LOCUS       KCKM01001670            1055 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26366apa ultra-conserved element locus
            uce-7291, sequence.
ACCESSION   KCKM01001670
VERSION     KCKM01001670.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1055)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1055)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1055
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26366apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1055
                     /note="ultra-conserved element locus uce-7291"
BASE COUNT          272 a          202 c          224 g          357 t
ORIGIN      
        1 ttttctgtat ttctgtactc tgatctagtt tttcaagaac tgaattttcc aatgaaatta
       61 atttgtgaac gtagccaaga acattcaaac tagattcacc caggggagaa gcactttgtg
      121 caggagaaat gcacattgtc agcatgttac cttgtattcc caaagaaacg ttcggttact
      181 ctgcagactc tagttttggg ctggtgtttc gaatggtcct gatctgggtt ctgcaggtgt
      241 acatgtgttt tctgtacctt tgggctcgcg tggctgtgag gagagacgca gctctaactt
      301 ggagagctct ctgccggtga tttgtggaag cttgtcaaag acaaggctca gctgtagaat
      361 atcatgttta atttcggaat gtaagaaaga aatcaccaag taggacgtag cccttggagg
      421 ctgtcatgac catgagttca gttaatacat ctgtgtttgt gtttatttcc catatccatt
      481 aacgtgtttt gttcctttgc aatttacagc gcagaactct gccaatgcag gttttgcaaa
      541 ctttgatgca tttggacagt ctagtggctt gagtaatttt ggaggtttcc ccacagcaag
      601 tcagtctcct tttcagcccc aaaatacagg tagaactcct agcacttttg attcatactt
      661 aattgaaata atccttacct ttatgttgga agggacttca gttgagttta tttcttgcat
      721 ctgcctgctt caatgcaatc gagccatctg aagctctggg gaaactcaaa atgaattcct
      781 ctgtttggtg ttttttttct ttttttcctg acgctactca aaagtctgat ttatggcact
      841 atgtgtttgc tagctctaca cctgaaataa ctgtgaaaag agtaaacata ctgcttctga
      901 taaatactga attgattcta tcttgaaaga gaagtgcttc agtagactcg aaagcacatc
      961 acagtaccaa aaaaaagtgt gtctgtatgc acacgcttga gtatgtttga cttcatgtgt
     1021 agagcctatt gctgagattt attttgcttt gcttt
//
LOCUS       KCKM01001671             904 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26380apa ultra-conserved element locus
            uce-2338, sequence.
ACCESSION   KCKM01001671
VERSION     KCKM01001671.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 904)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 904)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..904
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26380apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>904
                     /note="ultra-conserved element locus uce-2338"
BASE COUNT          279 a          156 c          181 g          288 t
ORIGIN      
        1 tggcaccata tatgaagttt tcatctaatt taacaggtaa tctgattcat cctctctatt
       61 ggttgcaaca aagggaaacc agcataaaaa aaaaaaagca aacacacacc tacccataca
      121 cgtaaatacc aagattccat tgctgaagtg agaactatga aaaagtaaaa cttttcaata
      181 agtctaattg tatagggcca aaccaaaaat aaatcagtag ttttctgaac tgtaactact
      241 gaactgagag gagaaactgt tccagtgcta aaatcttcag attaacaatg acatgtattt
      301 ctaattaaca ggtacgttaa cttttgagat gcttccgttc aaataagttt tgtaacattt
      361 acctgtatcc aagcgcttta caggggactc atcatcaacc tcagaatctc cacatgcact
      421 ccttgatctt ttccttgggt gcagaagtgt ctccaacctt ggaaggacta cagacaaaaa
      481 ggttttggtc cctagctgtg gagaagttgg ctgggtttca gtgttctttg cagacttttg
      541 ggggcttata cttttcgatt tgcagaagag aatggatgta cgtctgttta catcagttga
      601 tgactcagct acagcagaaa cagtcgactc attgagatta ctgtcaagta agtgttctgg
      661 agtgtgtcca tttatttctt tctgaatgga agtgctatat aattcattat caaattttac
      721 tcttttgtaa agcttactct gctctggatt gagttctact ggtttgaggg ttggtggttc
      781 tgaattagtc tccaagtttg aaggaagagg taatgcatct gatggttcaa gtttaggggg
      841 agatttatct cctgaaaaaa ttataaatag agtgtgattt ttgaaaacct gtagttagaa
      901 agtc
//
LOCUS       KCKM01001672             907 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26395apa ultra-conserved element locus
            uce-5915, sequence.
ACCESSION   KCKM01001672
VERSION     KCKM01001672.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 907)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 907)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..907
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26395apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>907
                     /note="ultra-conserved element locus uce-5915"
BASE COUNT          267 a          213 c          189 g          238 t
ORIGIN      
        1 ctccaacgaa ataccagatt acacgaagac cggtaaacct catgcccaat ccctctccag
       61 caggagcttg ttgaaacatt ccctgaaaaa cctgctgacg tgatgttccc tgactgtccg
      121 aacgccacgc cagtgctgca gcctcgtgat agcggaagct cccaccagcc cggtgcggaa
      181 caataccgcc gtcctatcag gcaggaggct ctgggctgac cgttgagtgc actcccgatt
      241 ttacaaactg tcatatggcg agatagtggt gggtttcaat gccgtcacct attcagtcag
      301 cccagctgaa ctagaatcac catttcagtt atatcatagc tcggggcaag aacatgtcac
      361 cctctttatt tccagctcgg aacaagctgc ttaggcagat gctaactgtg gtcctccctg
      421 ccatgttctg tagagtggcc tttgtctggg ttaattgagc ccccactcca tttaataggc
      481 tgttgaagtc ttattgaaac agagctagtg ccgcaggtta aatacattgc agtgctcttg
      541 ttaatcccct cattaacgga gctgtaaagc ttgttgagag ctgtgagttt gcatatatta
      601 tcagagagtt cttcactgaa gtgctatcaa taaaatgaca aagctagttt gcaaatagtg
      661 aaatcaacag tgacacaaag ctagatacct taaaaaaata aacaagttaa taactgataa
      721 atctaatttt cacacttgca ggataataaa accctcaaca aaacaggttg aagaatcttc
      781 ttttttattg gacaaactta aaacatgaat tacatgaaca tgactacttt ccttgagcag
      841 agagaacaag tgagaaaaat accacttctt caacaggggc ttctggctga ggtctgagct
      901 gtttaga
//
LOCUS       KCKM01001673             953 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26409apa ultra-conserved element locus
            uce-7246, sequence.
ACCESSION   KCKM01001673
VERSION     KCKM01001673.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 953)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 953)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..953
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26409apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>953
                     /note="ultra-conserved element locus uce-7246"
BASE COUNT          291 a          183 c          206 g          273 t
ORIGIN      
        1 aaaaaaaaaa aaaggcgagc ctggtacgta aagatgtaat gctgtgaaca ggcttaacgc
       61 agacggtggc ttgctcttag catatgcgtg gctttcatct cctcttagaa gcagctccag
      121 ttaatgttga tataaaactg cctgttaatt ggagtacatg gagataatgg taggaataat
      181 ctctaagtaa actcctaaaa gctctggaaa aagggtattt aaaaaaaaaa atcttctccc
      241 caaaacctga gtttgcactc tgctttgaag atagactcat cagtgtgcga agcagacttc
      301 tgccttgagg ccatttatag tgccgaagct tgtgaagcta aaacagtttg atgtgtaatt
      361 gcaggaggaa atggaaaacc tgctgagcat ggcaggatgt agtgccttat caccctttat
      421 gtgcatccag tgcttgctga aattgccagc ggatccgcaa catcgacaga acggtgacat
      481 ttttcatggg ccgccgtgtt ctgaatcaac actgcaacag tgcgattaga gtaggtaaag
      541 tagggggaac aatcaaagag ttgcatgtga cagatcaggt tttagtcatt ccctgctcct
      601 tattgcctgc tgtcttgtgt gatatgcaaa acagcttctc cagacgcatt acaccttcac
      661 attacctgaa aattgaattt tatttggtgg cctgcatata atttatagca ctcttccaat
      721 gcacttcagt tctcatttag ctaaaagtgt gttctttatt tcctactggc aaggaaacag
      781 agaaattaag ctgaatattc agcaccactt acagtatata agaaaacagg ctattgaagt
      841 tttaagctgc ttggatacgt tattgacaag aactgtctat tctggagtta agcacacgat
      901 ggatttgatt cccagaggta tcatctctcc atagtaatta atcagggaaa atg
//
LOCUS       KCKM01001674            1114 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26424apa ultra-conserved element locus
            uce-5490, sequence.
ACCESSION   KCKM01001674
VERSION     KCKM01001674.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1114)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1114)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1114
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26424apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1114
                     /note="ultra-conserved element locus uce-5490"
BASE COUNT          343 a          217 c          218 g          336 t
ORIGIN      
        1 atgatactgt tgatacaaac agaaaagata ctttctagct agctagctgg agagaaatct
       61 gtttcacctt cctcctagaa gcattgctgt gtcactagct ttgaagaaaa gataaagggc
      121 tgttattttc tttttgttct tgcacccaat tagaaaaata taaaaagaga gaagtcctta
      181 cctcccctct tttccttaaa cgagagtatt gcaaagattt gcatacaaaa gcacttgagt
      241 atttatactg cagtacatct ggcaattatc tttcaagaga aagcattcat tctagccaat
      301 tgccagaggc ttggcattac tgaagaaagc atttgaatat acagaagaaa agggatattc
      361 cagctttcta ccagctacct tgaacatact tcacgtttaa tttcaccctg ttgccacagg
      421 cactgtgttg ttatgacagc tgatctgcca ttgaatagct gtaaaggaaa atcaacaaag
      481 gatcgcttca gcgattttca gtgcaattta ttggagcttg tatcttgcgg ctgctgctgc
      541 ctgtcggggt aatgacacat gatgggtgat taaagtgcaa gtccctaaat caaagctgtg
      601 ccaacggtct gaagaggcag aaaacagcat tcagatcctg ttcatttctc gtggagggag
      661 gacctcatta ggaaaaaaat ggtctgtttt actaacaaga gaaagcactt ctgtctagag
      721 agaatgttca cgtttccgag atttaccata gctttcttac agcatcttct agatcatgca
      781 tttaatcaaa ataaataatt aaaccaggtg gagagaacta ccatgcatca tcattgccct
      841 gcaatttaaa ctgagctata cttgagttca ttcccatcct catatttaac acagtttttg
      901 cctttgtttc ccaggaaata gatggtgaaa gagagagctg cctgtcatta gggtaagagc
      961 aaaagtaagc aagggcagct tgccaaggtc atgagaaagg acacttgggg atacaagagt
     1021 tcactgaaat tattttcttt tctttccctt taccttactc tttcatcctg aggagatatg
     1081 caattaattt agctacagat tttaaccatt tttg
//
LOCUS       KCKM01001675            1239 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26438apa ultra-conserved element locus
            uce-818, sequence.
ACCESSION   KCKM01001675
VERSION     KCKM01001675.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1239)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1239)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1239
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26438apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1239
                     /note="ultra-conserved element locus uce-818"
BASE COUNT          384 a          253 c          216 g          386 t
ORIGIN      
        1 aagcatgcaa gttaaatcac tatttttaaa aatatttttg aggtgcgaat gagtagaaag
       61 tgcaaaagag ggttaataaa gatacttttg ctcaaagtca ggtttccaca tgagttgaat
      121 tgaacttaaa cttcaatgaa tgttaaacag ctacttacct tcaaggtaaa taatagacat
      181 ttaaggatag agcaaacatt gtttttcaaa tgtacagtca taccaggaaa tattattcac
      241 aaaataattt ttccatctat gcctatgtag ttctatccaa tttgagatgg aaatctcagt
      301 tttaaaaata gaaaacagac ttagattatt attattctct tttttttttc tttaggcatc
      361 cactccattt ccaagctttt tcattttctc agcaaaataa taacccttgg accttgtagg
      421 cagccaaata tcaggcctta accatctgtc aactggctta gattcagcaa gcatactccc
      481 gtagttttag ttctaattgt gtttaatgct gcactaatta tttcaatggg gaataatttt
      541 gtacagtcaa agttgactca ttttataaac tggaagctcc tcagctataa attggcaggt
      601 ctcatccttc atttctccta agcgttgtgc caaaggggaa taagtatatg gttgctctgt
      661 gaccaaatgt catgtgctgg gcagaaacat tgatcctggc tattaatcac tccgcaagcc
      721 ctcccagtaa tcaaagggca cagctgcaat gatatatgac cagtgtcaga gcagaaagcc
      781 ctttacaaga ctgcatgcct accagctgat ggccagtatg tagtacagca tgcacactag
      841 ccagcccaaa atgcccaggc caattaatca tcacccctaa ctgttcatac tatcattaaa
      901 cacctttatt ggctgaatta tctgaggatt cttaccccct aattacttag gtctggaagc
      961 taggaacctt ctcacctgga tacaaaaagc tgcctattac ctgctctaga ccggcatgcc
     1021 ctttcattct ctcctccata agagtttgct gacccagcag tgaacctgtg actaggagaa
     1081 aattggatac tgttgtgact gatcttggtg tggttcatat caatttgttg aaagaactaa
     1141 ataatatcag aactgtcaaa atcattaggt tggccttaaa agtctcaggt ttggatttac
     1201 accctcagaa ttgtggtacc atgtaacaaa cctgatatt
//
LOCUS       KCKM01001676             897 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26453apa ultra-conserved element locus
            uce-762, sequence.
ACCESSION   KCKM01001676
VERSION     KCKM01001676.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 897)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 897)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..897
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26453apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>897
                     /note="ultra-conserved element locus uce-762"
BASE COUNT          278 a          186 c          142 g          291 t
ORIGIN      
        1 tcatataaac aagacagaac tttaaagtca aagataagtt gttcaggcag ctgctgaaga
       61 aaacaaggcc atagctaaac tacaaacact gttagtgctg tgtctaactt aataagttat
      121 ttgaaatgtc ccatgcacca atgtccaaac tattccaaac aaactagcct ccttcctctc
      181 ttctccctca gcaacagtta cactgaactc ctgagatggc tctcctaaca ttaagaatca
      241 ctagcatttc acaaggagat caccatgtga aaaattatct tttaaaatgg agtttaattt
      301 gcatataagg aacatgagat ttatgacgag caacacagcg cagcactgca tctgcctagt
      361 atcagtcgta atttagattg tttgtgaccg atcttaaatt ctaaagcatg gagaagatga
      421 agtgctctgt tgccgtgtta ttgtcaggag tctaagactt accagagatt tattagtaat
      481 cttatcacaa acatgtctca agtttttgct tttaatatgt gccaagctcc tctgaggaat
      541 tttcctcact gcaattatat ttctcaatgc atgcattctg aagcttagtt gatttccttc
      601 ccaaaataaa gcgacctatc attacactac agtagctctg ctacattttt cctctgctac
      661 ttaataatca atgtattcat cattaaaatc tgagccctga agcaatggtt tttagcatat
      721 tctaatgact agcgacttgc aaattacatt gacctttcat gtacattctg taagcacctt
      781 gttctaatgt gtactgtatt tatagtttgc caatacaaac tagccaaaga ttggataatt
      841 actgtaatct attagctcga ttgctttccc tgctcatttg tagcatgtgc catatag
//
LOCUS       KCKM01001677            1072 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26468apa ultra-conserved element locus
            uce-5805, sequence.
ACCESSION   KCKM01001677
VERSION     KCKM01001677.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1072)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1072)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1072
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26468apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1072
                     /note="ultra-conserved element locus uce-5805"
BASE COUNT          308 a          183 c          232 g          349 t
ORIGIN      
        1 gtccctgatg aagtatgtaa aacaaaaaat cctcttctat ttaaaattgt tccaaagttc
       61 attagtaaac gcaaaccatt aatgttgtga cataaaccga attctgaatg tgtgcctggt
      121 gcactgtcct taatttgtcc tatggctggg ttcgggagta attcaacaca gtattacatg
      181 ccatatgtta tgcaatactt tggcgctagg gatgagttaa gggtagtctc aacccttagc
      241 actgaatgcc cttggttttg ctcgtttata tcacaacttt aaccttgctt taaatgtagg
      301 gtgttaattt aatttggctg ctctgtatgt gagacatctt gcctgagtga atttaattgc
      361 accattgagt aaaactaaag ccatgagcac cgatgcacta aaattctagc agaggtataa
      421 ggtttagttt tatatggctt cttgtttgga gttattaact atatggagga ataaaccccc
      481 tttaaaactc ttttttaaaa cattacaaaa cccacaatgt aaagttgcca tgagccagcc
      541 aaaaataata catatggcat tcaggagtgc agttgctaat tggctgctgc ctgagaaaat
      601 ggtacacttg gcttctactt aacactgtgg gtttggcaga aagccaggtt tggggtgagg
      661 ttgtgaatga agctgcatgt ggttagggag gagttcaagt gattcatgtc ttggaagttg
      721 tagtaagcag tgcagtatgt acttgggtaa gctgctggag gaaactcctc acccgtgtcc
      781 tccccgcact gacgcgttcc tacacctcca cttgtctcgc tgcgtgggga ctgtttgctg
      841 cgtttcagat ggttttaatc attaactaag tcgggctgtt tagtggttta attcgcattt
      901 caacaattgt tttcttacag atggagaatg gagaggagat agaagtagag gaattctatg
      961 tgaagtacaa aaacttgtaa gtaaagttat aggtttgatt actatccttt aaggtcacat
     1021 aatttccaaa tattttttaa aaaatgcttt tataaatgat ataataactt at
//
LOCUS       KCKM01001678            1024 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26483apa ultra-conserved element locus
            uce-7354, sequence.
ACCESSION   KCKM01001678
VERSION     KCKM01001678.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1024)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1024)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1024
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26483apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1024
                     /note="ultra-conserved element locus uce-7354"
BASE COUNT          267 a          228 c          238 g          291 t
ORIGIN      
        1 aatcgaaagg aaagtggtac gttatggttc cagctgaagg gcagtatcaa gagacagcat
       61 ttttgaagtt aacaattttc tctctctctc tcgtgtctcc ccacaacttg gaaataaaat
      121 ggccccactc gtgtcacata tttcgattta cgtttgggca tgtagcatac agtctgcatc
      181 acctgagtac caggaattaa actgttttcc ccctcccacc cccaattttg ctggcactcg
      241 cagacagaca aggcatttgg ggtatttcag taccagccca tctctagtta tcaacagaag
      301 tttgtgaggc aaaatagcta ttcttatctg tccagcagct gcttcaaagc tctttctatg
      361 ttcattctgt gcccaactct agtcactcca aggtctatca gatcttcctt ttgtagattt
      421 ggtaaatgag tgccatctat ttcattgtcc ataaatgttt ctttatgttc acctaagttt
      481 agactttcca accaatctgc cacatctggt ttagtccaca ggtggacagg cttagttgta
      541 aaaggcttat ttgagattgg ctgttgtaat attgagggag aaggagacct gctgcgccct
      601 gtggtcaagc caaataagtc cccagaaggg ggctggctgg gtaggctaaa tacatcggac
      661 aaagtcggag aaggagatga agctgaagca gaagcagtca gaggagcagg catgatgtct
      721 ttattaatct ctgttggtga aaccacaggg cttggagcat gtcttgctcc tgaggtccta
      781 ctgtcatagt ctggggacct gctctgcagt gtgatcggct ggctggctcc aggtcggaca
      841 gtaaaagtga ttgttgtact tcgtgtacct gagacagtac tcatgacttc cgtgctcctg
      901 caagtgcaaa cagacatggc aagttagaca caccggccac cagctgtatc aacactctgt
      961 aaatgccatt tgggaatgct tgaatttttt aacgggaaat accaggttaa aagtactaag
     1021 acgg
//
LOCUS       KCKM01001679            1147 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26499apa ultra-conserved element locus
            uce-3890, sequence.
ACCESSION   KCKM01001679
VERSION     KCKM01001679.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1147)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1147)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1147
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26499apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1147
                     /note="ultra-conserved element locus uce-3890"
BASE COUNT          332 a          202 c          233 g          380 t
ORIGIN      
        1 cttggatacc tggagtaagg taaaagtatc ctacagagaa gctcacagta tacactgtac
       61 ttttgtgata tttaaataga tgtcataagt cttttcttta aatgcccaag ggaaaattct
      121 ctctcaccat gctgtgatga tgactataac cctgctgtgc atgcgagttt tttgtttgag
      181 tttgaggttt tgttaatttt catggcattc atagcaaaag acatatactg caatgaattc
      241 atattggact ttacaagtat tctctgagca gaatgatact tacagtcttc ataccagctt
      301 gattagaaat catgttttat gtcaatttcc ctttacagat gtactttggc atactttgta
      361 ctaaattttt tccccctaaa aagttctctg tgtcttattg attgcaaaac atttttaact
      421 aggggaaaaa aaatgtgagt aatggtgttt ttaaagaaca tatcaggctc tgtgataacc
      481 aaggatgtgc tcaagtggca tgaatgcttc agctccagat gggtcagctt taggggtcaa
      541 gttgtgaaga gaaagccatc acacacactt catcaacacc gtggaatgag agaccagtgc
      601 atttactgag caatggattt ccagtgagcg tataaactaa ttggtggatg aacatgcccc
      661 aggagcaatg attttaaggt catagcaggc tcagtgaatt gtgctgactt acactgtgtc
      721 tcactgatag ctgatcttac caatgagcag tttagaggca ttcaagcctg aactcccttc
      781 catgtgcctt gaatggcatg tcagcggtca ctgtttctga catcctttat atttgtccag
      841 tcagctctaa atctttaggt tgggcttcgg cgtgctcagg aaagaaaggg gagaagcaat
      901 tattttcagt cattgagttc tgaagatctt agtgttaatt atgccaaaca cggttcgttc
      961 atcaacaaac tagaaatgtt aaagagaggg gagtgaggga actgatattt ttggtgatca
     1021 aaagtttccc aattagaact tgctgtttct tagcttttac ttttatctct tctcattaat
     1081 ttcatattcc ctttgaaaac attagttgag taaatacagg tttttatatg actcggtaaa
     1141 tttgcaa
//
LOCUS       KCKM01001680            1084 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26514apa ultra-conserved element locus
            uce-624, sequence.
ACCESSION   KCKM01001680
VERSION     KCKM01001680.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1084)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1084)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1084
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26514apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1084
                     /note="ultra-conserved element locus uce-624"
BASE COUNT          346 a          204 c          185 g          349 t
ORIGIN      
        1 ctgtccaaaa cctgctaagt tttgaccaaa agctaagtca caccgtgaac ctctgatgct
       61 ctagtattta tgtaaacttt tccatagatt aaaaatcacg tcttctacac ctactgtttt
      121 taattgaaga acttagcatt ccaaaataac ctcacctttt catgtacatc tgaattaaaa
      181 atgtaattcg caaactgctg gaggcctgct tatataggtc aaggttgcat gggttcattg
      241 ctttgtatat tacagtttaa agaatgctct aaattcaagg ttttcaactt tttaatctat
      301 ggggaaaact tcctgtaaac tcagattaac aactgctaat gcactgaaga aagaaaactg
      361 aaaaccttcc ccctactata aaaacaaaat agtgtggcct ctgtttcttt tctgataaga
      421 gtcttaaata ccaaacattt aactgcataa taacatttac tggcagccag gcagcctgct
      481 tagcagatat ataaagcagg taaaaggaga aaaagttaat ttcttggctg aatgattcca
      541 tcggtagcta tagggcaaac tagaaagtct tttagtaaag tagcagttga ttcttctatc
      601 aatctgcagc acacatactc ttccaaggaa tgcattaaat atgaaaatca tatcctgtta
      661 tcatctgttt ccagctttca gcccagtaag cttttcttaa tgaatgctgt agcctaaggg
      721 acaagcatgc tgttggcttt tctgaataat ggagtgatgc taccattttt gcttattaca
      781 atatcgccta gctgaggggg tttcacacat agtcacaagt gactactctt gccagcatgc
      841 tccaagttat tacaagatgt ttttagacat ttcatctaaa agagctttac tgcttttagc
      901 aaagaaaaca gctatggtct tgaactgtat catttatatg gagataggag gagggattag
      961 aagcctgcat tactgcagat atatagcaga atatatttaa gtattccttg tcagtctttt
     1021 tgtctgttac ttagatatgc aatctccttt gcttcttttg aaaaaaggtc aaaacgcaca
     1081 aaat
//
LOCUS       KCKM01001681             571 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26530apa ultra-conserved element locus
            uce-3692, sequence.
ACCESSION   KCKM01001681
VERSION     KCKM01001681.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 571)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 571)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..571
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26530apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>571
                     /note="ultra-conserved element locus uce-3692"
BASE COUNT          183 a          119 c           89 g          180 t
ORIGIN      
        1 atttgttaca agactatgta gcttcatgct ctacacagct gaacaaagat gacagcactg
       61 aaatgagcta ttattatttc catcagggag atacggggaa ctagtctgtg tcattgaggt
      121 gaaaatatat attcattaaa tggaaaagct ttaaaaagca gcactatcta agatatcagc
      181 atcccgtctc ccttggagac agctaaaccc cccatttatc taaattatct tggtaatatg
      241 acagagtgat tgctcactaa tggtcagtaa cagttttctt tgtcattttc ctagtcatta
      301 cctcctcaga atgaactcca gaataaactg ctgatgcatc gtgactagaa tataaagcgc
      361 attgttacaa tggagaccat ttctattaaa ctcacgaacc catacattgg acttctgaca
      421 ttttcattta tgaaaaataa tatccctcta ttacagagcc tgatgagctt agatatattt
      481 tatgcttaaa acagcagtaa agtaatattt attttacaca gctgcttcta ttttcttcct
      541 tttctcccca cagctactca cacacaggag c
//
LOCUS       KCKM01001682             945 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26545apa ultra-conserved element locus
            uce-1170, sequence.
ACCESSION   KCKM01001682
VERSION     KCKM01001682.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 945)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 945)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..945
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26545apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>945
                     /note="ultra-conserved element locus uce-1170"
BASE COUNT          275 a          182 c          188 g          300 t
ORIGIN      
        1 aggaggggga ttttattcag ctccaagtaa tatatttctc caggactaat atatgatgaa
       61 aaaataaatt tcccttctgg caacttaatt tgtagataac tgtggttgtt tgaagatagg
      121 atttttacat taaacttgga atctgcatga ctgtttaata tcattaaggg aatattatat
      181 tgactgcaag taactggttt ccatgtggtt atatcaatct atttctgtaa gactgtacac
      241 tagttgttcc cctagagtac tccttgtaat gctgagaaag tgtcagaaat aatgactgtc
      301 tacctatatc tgcaataaaa cgtagagcat ggatattata gttgtaagta tcaaagattt
      361 atttcatgac tgcaggtaat gatgaatctt ttagcacaac taatgtctag aggaaacctc
      421 tcttcttctc tgagctgtca catggagact atttataggg cccttagtgc tgtggggctt
      481 tagcataaag aggcaatgtg tctgaggtgc cacaggatgg aaatgttagc aagggctccc
      541 tctcattgga gatcttttag tagatggcat tagattccct ctttgtgtgt ttacgtcccc
      601 ccaaagacag gggacagatg tttaacatca gaccattaat cccttagccc aggttcctgt
      661 gacagcgcaa acccaacaga atgagccctt tgcctttgct cagtgtaaat gccgcaattt
      721 actgctgatt tacagagtag ggtcaggcca ttagaaactt ggcaatcttc tgtacagctg
      781 gaaaacaata tgcatgataa gctaaaattc aataccttct tgcactaatt aaatgggttc
      841 ccaccaggac aaaaacacaa attacaaaca gggcttttct gcatctctat gcatttttcc
      901 ctgcagatgt gaccatgctt tatttgggtc cttttctcct gacca
//
LOCUS       KCKM01001683             651 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26561apa ultra-conserved element locus
            uce-3310, sequence.
ACCESSION   KCKM01001683
VERSION     KCKM01001683.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 651)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 651)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26561apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>651
                     /note="ultra-conserved element locus uce-3310"
BASE COUNT          201 a          139 c          129 g          182 t
ORIGIN      
        1 atatttttta atagagtcaa cggacagatg gatgaggttt tagagagaca aagacataag
       61 ggtgtaaact ttagccaaat acaaagagaa actgcctggg aaaacataac agagagtaac
      121 tcagcatggc ttggtactgg gagctgaact tgcagctttg acaaggctga ctttaaggcg
      181 accttcagtg gagctcctta acagtgtatg ctgggcaatc gctggtaaat ctttattaat
      241 tttaattggc ggcacccatt tataagaacc attaaaaagg ataaattgag cccatccggc
      301 gtaatgtctt ttgttaatta gtttgtcagc actgttttaa tatcccctaa tgacttcata
      361 tttcaggcct gacattaaag gagacgctgt gagaaaggaa atggtcttat caccgtgtac
      421 atttttttct ttttttgaac aaaaagtgtc cttccaggcc tgaccaaggt taggtgtcac
      481 ttaactcaga cagacaggta ccacaagact tggaagggcc ctatcaccct atccaaattt
      541 caacttgcta ctcaccagca tgctctgccg aggctttttc tttatacaga cccacataac
      601 agcagaagaa attcaaaatc atcagtcacc acattcccac cctccatagc t
//
LOCUS       KCKM01001684             427 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26576apa ultra-conserved element locus
            uce-5866, sequence.
ACCESSION   KCKM01001684
VERSION     KCKM01001684.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 427)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 427)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26576apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>427
                     /note="ultra-conserved element locus uce-5866"
BASE COUNT          130 a           69 c           70 g          158 t
ORIGIN      
        1 ctacatagta atgctaaata ttctaggcaa tggaaaatca gtaacatttt ataaatgagc
       61 atatcctata aactcagata tgtcttcctt cagaccttta aatcctgctt tcagcataaa
      121 gacagattgt tggtgtagta aattaaagct gccttactgt gcagctattt tgtccaatgt
      181 tctatcacag acccatatta atattttatc ccctttaata ttattacatg atgcaggctt
      241 tatttaaata gatttgatgg gctcttggtt ggcttgacaa ccagagggaa aaattgatgt
      301 tctgcattta atctcggctc aaggtgctaa attatttcgg aggtcgaagc tgtcatgcat
      361 atcatgctaa attattgaat gtaataacta ttagcctgat gtctatttat agattttttt
      421 tttttaa
//
LOCUS       KCKM01001685             840 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26591apa ultra-conserved element locus
            uce-1948, sequence.
ACCESSION   KCKM01001685
VERSION     KCKM01001685.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 840)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 840)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..840
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26591apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>840
                     /note="ultra-conserved element locus uce-1948"
BASE COUNT          239 a          149 c          192 g          260 t
ORIGIN      
        1 ttgaggctag gtataaaaaa gatgaagcct gagaaatgtt ctgttaaata gaagtgcttg
       61 catttgagtt gtgtattaag tgatccctgt gtatagttta tatgcatcaa tttaagttca
      121 gatggcaatt agggttattt caggatgaaa ggtatgatat acgtgaaagc tgcttttgtg
      181 gttatattat taaataaaac atttctatca cataatgtaa aacatccact gccttattta
      241 tagtgcttca ctgcaaccat attttactat cttgagacat tccttgacca aaaatgttgt
      301 ttctaatcac agagtaaatt aataaggttg ggtgactaca gtctaaatct ttttaaaact
      361 aatctagtca aatatgtgct accataacta ggccatagca gtgtgtgctg ccgtgcgaga
      421 gactagggtt taattcttgg attctgcttc tcactccatg agcaggagct aggagcactc
      481 cagagctgca gcctcaaccc tgggagggat ggagccttgt gtcattcaac agcagtgacc
      541 cccactggcc aatttaagga gaagcattga ggggctctaa aaggagtcac ttccagtcct
      601 cctcagaggt tggtggtcat tgcacgggaa ctagtgagtg gaggttcaat ggggtgcact
      661 cggtggggtc ttcagctttc agtctgagga gcagaatcct ctctggggag gaatcagcat
      721 gtgtgcttcc tgagacacta tatttgcctg acataactat aagcggcagg attgtcaaga
      781 atatacgtat tttttaaaaa tgtcctgtaa ctaatgctgt gttatctatc ttttaaatag
//
LOCUS       KCKM01001686             837 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26606apa ultra-conserved element locus
            uce-868, sequence.
ACCESSION   KCKM01001686
VERSION     KCKM01001686.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 837)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 837)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..837
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26606apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>837
                     /note="ultra-conserved element locus uce-868"
BASE COUNT          263 a          155 c          135 g          284 t
ORIGIN      
        1 aaattactgt ccataatgca agatgaggtt ttttttacag catcttcaaa agaaatctct
       61 taacttctgc ttcttcctca ggaacatcca acacagtaaa tgaaatgtta ataaatcacc
      121 aacaatttag cctgacaata acatgaattg accacattga ttaaattgat tatgtttcat
      181 atatttacaa catgtagaca caagcctaat ttattttctg aagagttcaa ggtaggtatc
      241 actggtttaa aaaaaaggca aaacaaaaca gtggagtaat gtgtggttgt tatctgcaat
      301 agtctaatgc tgacagagag cagtatttta tttagtaatt aacagtgtaa aggggagaga
      361 agctgtcatg ttggttctta agctggggaa tgtgatgaaa gatgatatct gcgatctcat
      421 cctttccact tgtttaagat tgtcaggatg agaaatgtca gcattatgaa agctcagctc
      481 tgctcttgat atgataaaac ccttcaaaag ccagtctttc tctccctctc ccccctcctt
      541 tctccctctc gcacttgctt ttttatttat cctgttttgt tagatggcag aaatataatt
      601 cttttctttc ttcctattat aagccaccat ttttgtttta ttatatgttt cacaacccct
      661 aatgccccac tgaaaattac cttgttaaat gacagtgttt caaaggcatg aatcctttcc
      721 accattccct cagaggtttg aaacagtcaa cagactgtaa agaataaata ataaaaaagt
      781 attgattatt ttgatgactg tgagattcaa ttaagtatta attttgccct ccagtgg
//
LOCUS       KCKM01001687             564 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26622apa ultra-conserved element locus
            uce-1390, sequence.
ACCESSION   KCKM01001687
VERSION     KCKM01001687.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 564)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 564)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..564
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26622apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>564
                     /note="ultra-conserved element locus uce-1390"
BASE COUNT          197 a          110 c           99 g          158 t
ORIGIN      
        1 tatctaaatc ctgaatattt tatagaaaat aaaattatat ttatttttaa gtgcattcta
       61 ccttcaacac aactgcatcc tcacaacaaa tctattgcgt tgtcctgaca tagttactgc
      121 aaaggttttt cctttgctgt cccaagggcc caattgattt atctgccaga agcctaaagc
      181 cccaaaataa gatagctttg agtttacaga ggtcattttt cattgtctaa ataaaaattt
      241 ctaaacaaaa atctctcatc ctgttaaccg cagggtcctt atctccccag aggctacaga
      301 aacctgagag aagccatttc aattctttta tgaagaaaga taaaagcaag ttttcgatta
      361 gaaagccaag gaaagtcttc ttattaaatg gtggtaacag taactattcg aaaaggcaaa
      421 accgttcaag gaagggggaa aaagggaaat cattatgcat gaagcaaaca ctatacacga
      481 ggctgccaag gcaatctcag gcagtgacat tcaggaagag aaggaaagtt cacaagcctt
      541 tgtaactagc gatagttcat tctc
//
LOCUS       KCKM01001688             885 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26636apa ultra-conserved element locus
            uce-5759, sequence.
ACCESSION   KCKM01001688
VERSION     KCKM01001688.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 885)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 885)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..885
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26636apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>885
                     /note="ultra-conserved element locus uce-5759"
BASE COUNT          242 a          206 c          181 g          256 t
ORIGIN      
        1 tttggccttc ctggtcaggt ctgctccaca ctgccttgac cctgcaacca gtttctgatg
       61 tggagcagtt tgcaatatcc tggtgattgc cctttcaacc tgacaattct tcagggacct
      121 gccatcgtct ctggcctgac cgagcagctg agaggttttc tgccttgaga cttcagacca
      181 tgcatttcca gagtgaaagg acaacaagag ttgactcagt attaatgcca aactttaaat
      241 gttttgacta taaaactgaa acaccattac ctattccctg cagagctcct ctctccctct
      301 ccccttccat tctcatctcc acactgtagc cttttgtatg tctcaggcat taatcccttg
      361 ctgccggggt gtgtaaatta aagaataata gagctgcaga ggcataagct cgcgatgatg
      421 gggaatgtgt ttgtatgcta agaagcaatt tcagcgaaaa ttaactcaat ttcatctgaa
      481 atagtgaaga ccggcataag ctggcagatc cctgaggacg gtaaaattac ttcgtcaaag
      541 ctctgcttgc ttaaattaac caagcaagca ctccaggtta ttggcgagat gcagctagta
      601 actaggtttt aataaacaaa aatagctttt tggataaata aggaaagtgc aaagcacctt
      661 atgtattctg ctgatgtttt catctgtgtg tcctcaacag aaagaccttc acattccttc
      721 aggagcattc ttccagcctc tgtgtccatc tggtctctct tcagagcctt tgcaaacaag
      781 tatgaatcac aaagtgcttt tggtaatgat gttagataaa tcttttactg gcagctaaca
      841 gactgaactg gcagctaact ggcagcaatg ccaaggtgca gtaac
//
LOCUS       KCKM01001689            1030 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26651apa ultra-conserved element locus
            uce-53, sequence.
ACCESSION   KCKM01001689
VERSION     KCKM01001689.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1030)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1030)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1030
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26651apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1030
                     /note="ultra-conserved element locus uce-53"
BASE COUNT          297 a          209 c          156 g          368 t
ORIGIN      
        1 cagtcctctt ccaggagagg aatgatactt gctgatattc ctcttgtcca gtctgcattt
       61 aaaggcctca aaaggtagta gatactaatt ttggaaagtc attctgcagt ttaatacatg
      121 ctagtttcca aaactcattt ctccctgtaa cgcaatacac gtaattcatg ttctttttat
      181 cctctgactt tttagtccaa acattttttt tttttccatt taccttggag ctgatgttct
      241 gaaagctcct tagttaaggt ggaaaatgtt gagtctctct tgcggtcagg aaatccacat
      301 tttaatacat gacttcaagt ataagtgaga ttgttattgt tattattctc cttccacaac
      361 tccattttag ttagctgcct tttaattgca tgtatcagca aacgttgaat aatgatttta
      421 tctatattct aaatttagag cagttaaatg caaagcaaaa tgcagacact ttcttgtgtc
      481 ttaattgaat gaaggtcaca gctataacaa catttaattg agctattttt cattatcata
      541 ttttaatgac tttgcactga cagttcgcct gcttctgagg aaagagcatg atgaagtcgt
      601 ttatttccct atttagttat tgtttgacaa catcatcttc gattaagact ctgctttata
      661 gcacattaat catatttgaa tgagcaaggg gtataaatgt aaacatatct cccatcctct
      721 gtttcctcat gtccctgcat gaaagcaggc taaacaaatg cttgcatcta ttgtctgttt
      781 gcataatagc caacaacaag gctaaacacc agccctcagc aatctcattg tcaccacccc
      841 tatctcaccc ttgcaccttt caggaagaag ttatgatctt ccacttctga atgctcaata
      901 attgtcccat ttatctcaat ttgcagttca gtctttaggc accaatagcc aaaatggtat
      961 tttttattat atttttttaa gccagtacct acaatgcagt tgcaaaagga gattttcatt
     1021 tccaaataat
//
LOCUS       KCKM01001690             655 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26666apa ultra-conserved element locus
            uce-7806, sequence.
ACCESSION   KCKM01001690
VERSION     KCKM01001690.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 655)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 655)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..655
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26666apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>655
                     /note="ultra-conserved element locus uce-7806"
BASE COUNT          160 a          154 c          128 g          213 t
ORIGIN      
        1 tttcctaaaa aatgtatgta ctctgtgcag aaatacctac ttcctctcat catgggaggg
       61 aaagaagaca ggaaacaact tcagagaatt gagtcaaaca tttctgagat gagtggcagc
      121 gtgacacaga caggtaaaga ttaatgactc catcagctca cccctcaaag ctttctcccg
      181 gtatcctcca ttctgccaag actcccaccc ttttctttcc ctccatctcc actttatgtg
      241 gtgacttcat ttatctgctc tgagaatctg ttcacatttg caaatgaagc cgccgtcatt
      301 tcggtttaat ttgaaattgc ttgtttactg tcggcgcggc ctcaattaat tatgttttta
      361 cggaaaggct cccaacctca gaatattaat aaggggaata aaatgacagc ctttcggagg
      421 gctgtaaagt tcatttttaa tttctgcttc tctgatgttt tcaggggctt ttttttggtg
      481 ttttcccccc accttccatc tgaaaatccg atgaagggtc aggggagtct gtaattactg
      541 tgcctccctg accttagcca ccttctctgt tattgactct atagggtgtc tgttcattac
      601 ctggtgccct aatgatggtc tggattagct gttacctgtc acaccaatag agttt
//
LOCUS       KCKM01001691            1115 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26682apa ultra-conserved element locus
            uce-5508, sequence.
ACCESSION   KCKM01001691
VERSION     KCKM01001691.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1115)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1115)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1115
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26682apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1115
                     /note="ultra-conserved element locus uce-5508"
BASE COUNT          277 a          242 c          265 g          331 t
ORIGIN      
        1 tgaaatcagg ctcaaaggga gcttggggag catttaaagc cagagcttgg ccatcagctc
       61 agaacctgcc attactgagc tgcagtattt ctaaggtggc atttaaataa atggagcgaa
      121 ccaaaatggt atttgtcctg aaatgagaca cccggagaga gtaagtagct aataaacaac
      181 agcgtagatt gggcgttcgc tacgtggtgg aagttgcacg tccttcctgg aaggagctgt
      241 ttgcggtcct tgggcaatat tttcttccgt ggtagttctg tctctgaatt cgcctgggct
      301 ctgttcttgt acactaacac cacttgtgct ccagggtgtt cctgcagttg tagcataaag
      361 gatgacctct tgtatccggc acctttttgc atgggtggag tggagagcag ctctccgtga
      421 accttcagct tgtgcttctc catgctgctt cctctcaacg ctcttctctc tttggcgctg
      481 cctaactctg actctggctg ttcatggggt tttcctttgt gcttgatcta accatgtggt
      541 agaacaatac aaattgaaca tggttctgtc aagcaccatg gaaggctgca tactccctgc
      601 cgcatggcat gctgggatac ttctgctgtt ttcagaagca tcaaaaggtg agagattccc
      661 cttttctcac aggaaaaatg aaacaggtga agtgttactt aaccagactc ctgagcaatg
      721 ggcgcgggag ccccggtgat gtttgcgaca gactttccag agggcttgca tgcagaataa
      781 ccatttctaa gtaattaatc tgtttaattg ctcttgtaat gaagaagtta ggcaacttgt
      841 tgattagtat gattcagggg tgattccagc catatttaca gagatgaaaa atcgattttg
      901 tcttatacct tacaaataat gtaagctaca tctctctgaa ctgaccagtg agtccttctg
      961 cttgaggtac acttgggatg ctgtccctgt aacaagatgc ctcctgctta atgtatcttt
     1021 ggacctgatc tgaccaatct taatgcgctg gaattgcgtt gtaaagtcta ctgcaaaagg
     1081 acttcagaag agtctgcaaa gcttatctct ttaaa
//
LOCUS       KCKM01001692             795 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26696apa ultra-conserved element locus
            uce-3440, sequence.
ACCESSION   KCKM01001692
VERSION     KCKM01001692.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 795)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 795)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..795
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26696apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>795
                     /note="ultra-conserved element locus uce-3440"
BASE COUNT          225 a          141 c          154 g          275 t
ORIGIN      
        1 ctcttatgta gaaactaaaa ctgcaaccaa ctcagttaat ccaattacta ttttaccttc
       61 tctttggaat tatgtgaaat tattgtgaac gtttctgtaa taccagttgt tgtaccatgt
      121 tgtgatactc tcatttccag tgcattttaa aatttttttc taattgaatt agctgtctag
      181 tactaatatc cactacataa tagaaattct ggcaaagcta ttaatttaat gtaacaaact
      241 ttgtatccag cttctcttga agtggctggt tacattctaa tttctgtgtt gtgttctagc
      301 ttatagatca gttaaaacct ggcggaagat tgatattacc agttggtcct gcagggggaa
      361 accagatgct ggaacagtat gacaaactag aagatggcag tgtcaaaatg aagcctctga
      421 tgggagtgat atatgtgcct ttaacagata aagagaagca gtggtccagg tggaagtgat
      481 tttctgttcc acttcacaca cacacaaggt gaaagggtgt gaattttaag cagatagact
      541 gcaaggcctg cctttgctgc tgtcattgct ttctgctcct ccataccatg acaagtgact
      601 cagcctgcat tactacatca ccaaaaggag gttatgctaa gtttgagtta atttaaaagc
      661 agaagaaaaa tattgcatgg gttgcacttt gtctcttttg gacatgtttt ccttagcctt
      721 tgcgtgttga agtttctttt ttgttgtttt gagcacagta ttttcgaaat ttaaacttcc
      781 cttctgatga acttt
//
LOCUS       KCKM01001693             732 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26712apa ultra-conserved element locus
            uce-1128, sequence.
ACCESSION   KCKM01001693
VERSION     KCKM01001693.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 732)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 732)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26712apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>732
                     /note="ultra-conserved element locus uce-1128"
BASE COUNT          190 a          150 c          190 g          202 t
ORIGIN      
        1 tgctcgaatg atttgagagc gtggctgctg cctgcaattc tcattggact ttgctttctg
       61 gggtagaggc tgttcctggt ctccacaaga ggctgaagga ggactgcact gcttccaggc
      121 cctggggaga gggggacagg gcactatctg gatttgggcc ccccttctgt tgctaattgt
      181 gtgaactgca gagttatgaa cccactgtgt ttcaggttac acaatgcagc agaatgggat
      241 gcgattgaaa aggctacaga taaaatcaaa tgcgagggaa ggatgagaac acgtcctttc
      301 ttctagccat gactattttg ttgtgtctgt tatctaaccc tgtaattagg acggcattca
      361 gaaaattcga acaaagttgg tattcttttc ataaccccca aatctttgca ttgctgcatg
      421 aaacttttgg cttcagcttt tccctgttca ttaaccatgc caaaattttt aatctaacac
      481 cactgttaaa gagtggcagg cttccaggga aatatatcag ccaggcttat taatttcatg
      541 ccaagtgctg gaggcgtgaa tgtagagaac gctgtttgag tttggataat aggaatcagg
      601 cagcttaaag gcaggggata aagatcagga gccctgtgtc tcaagaggag gagcaggtgc
      661 aggctgcaag caaggccttc aggcccaaag gggcagccag tgcttaaaac aatctgcagt
      721 gccttttttt tt
//
LOCUS       KCKM01001694             843 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26727apa ultra-conserved element locus
            uce-3826, sequence.
ACCESSION   KCKM01001694
VERSION     KCKM01001694.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 843)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 843)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..843
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26727apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>843
                     /note="ultra-conserved element locus uce-3826"
BASE COUNT          242 a          165 c          162 g          274 t
ORIGIN      
        1 tgtgtgctgt gtagtttggt gctggctaaa aacagctaat aaaggctcag ttcaaagccg
       61 tctatttctt agtggggggg aaaagatgtt attctgacat cattgctctg aatgagcagc
      121 ctgcagttca tacagtatac gctcccctgg aatgacaaat tttctgcctt tttcttgggg
      181 ggaatgttca ggcaaaagga aaaaatgcat aagagaagca aagaaaattc atttgtataa
      241 gctggccccc ctactgtgga attttcaatt atatatatct aattatggct gtcagttgat
      301 gaattgagaa aagacatttt ttgtcccccc tccttttttt tgtctcttcg tcatctcttc
      361 tgttagaatg attatagcac acttacacaa ctaattgcct tactgcttat tagtgataca
      421 attatgcagg ccagactcct tgtgtgaaca accatctgca gagaaaaaaa aagtgacact
      481 attcaaaact atccataatt taaccaatgt tattccaatg cactgagctc agacaattgt
      541 tgggccttca tatttcatac ccaccctgga aaaagagggt tgtgggtttt ttcttttttc
      601 ccctctcttt ctctcttttt ctctgtgcac tgattcacct ctttagaccc actgtgaatt
      661 ggaaagaaag gaagagaaaa aagtgcttca tatgtcaaca aaaaggaggg aagtgaagca
      721 tggctaatgc ccattcctcc tgtgggcaat ttttcttcaa attttatact aataggcatt
      781 ttcttctgct ttagaaactg ttgagaaagt gcagatgtcc tgaccacaga aatctgtgta
      841 tgt
//
LOCUS       KCKM01001695             411 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26742apa ultra-conserved element locus
            uce-1500, sequence.
ACCESSION   KCKM01001695
VERSION     KCKM01001695.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 411)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 411)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26742apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>411
                     /note="ultra-conserved element locus uce-1500"
BASE COUNT          133 a           69 c           78 g          131 t
ORIGIN      
        1 taccagataa tatctactgg catcaacttg gctaataaaa atctgtttaa taggatttgc
       61 catttttcca gttgctatca tgatcagctt tgcattttga ttatctttaa actttgcctc
      121 aattttctca tagaaagctc tcagtagtaa ttgctttaac atttattcca ggtcaagtgg
      181 ttaagtatga ataatgatgt gtcaaaaatt tacagtagtg ctgtcaatag agcaattacc
      241 atttagctag agattattgt ggcacaagag cacattaact gggcacagta aacagaacaa
      301 caaagaaaga aggggcaatg ggaccaagct gctttcaaaa tgtgctggtg ttatacagcg
      361 tgtgttgctg acagatatta gttgttacat aagagcaatt aactccgcca t
//
LOCUS       KCKM01001696            1253 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26757apa ultra-conserved element locus
            uce-1012, sequence.
ACCESSION   KCKM01001696
VERSION     KCKM01001696.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1253)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1253)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1253
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26757apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1253
                     /note="ultra-conserved element locus uce-1012"
BASE COUNT          313 a          252 c          251 g          437 t
ORIGIN      
        1 tctgctcagg ctcagtttag gctcttgacg ctaacttcgc ttggttctct gtggcttaac
       61 tgtttgctgt tcccatcatt gtttgtaaca gcattgtttg taggtcactt gcagttttaa
      121 gtgctaattg aaggatcgga tttcttcatg tgtaattgtt ttgtggtata cggcatgttt
      181 taaaacttcc ctctttttaa tataaaaagg cttttagaca taactatatg gagagatata
      241 taaataatat taatttcccc gtttacttcc ctaactgttt ttgcaagaat gaatgtggat
      301 taacattgtt atcctttcct aacaattatc tttcgctact ctagctagtt tagttctaaa
      361 agacagagcc attgacaagg gaaaaaaggg aaccttctca gatttttcag ctcagcggtg
      421 gtaatgttgc actgaacact aatgagggaa cccccactga tttgcctgct ttgtgacttt
      481 tctatttcat aattattttt aaaacgcaaa acgacatgag gtagcctagt catgtctcta
      541 caacttcctg gtagctcagt tcatactgca gatggcaatt tgttcttgta acatatatgt
      601 ctctctgacc attttcatct aatttgtatg ggttctacca tttcctttct ctctttcagg
      661 gaccttgctg tgtgtgagct agggggtggc atgacatgct tggctgggct catggtaggt
      721 cttttctcaa ttccaatccc attcagagga agaaacaaaa ggaaaaatgt tccagtgcct
      781 ccaactgctg ggtcagagaa ctgtcaacag cctcagctgc ggtcaagctg cagagtcttg
      841 agagaccttc tagattgact tgctttcgta tcatattgat tttatggttg cctcgatgag
      901 cagaaacatt ttacctccgc gtagtcaata tctcttgttg tgacattcca ggccacgtac
      961 ggtctgtctt tcattgccat agccgaagct tttttttttt ttcagattat agtcccattt
     1021 gctaagatac aggaatagcc tggcgaatca cagttggagc accatgatat agctgctaat
     1081 gttttgcctg cattattaca ccaacaaaca tgatccagag ctctcggtaa ttagattctt
     1141 ttgaattaga ttggccattc aggagagtcg ttcaccattc tctgggttct gagtcatgta
     1201 ttcaggagat attatgtagc agtgcagtgc attagacaag tttttatgtc tct
//
LOCUS       KCKM01001697             984 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26772apa ultra-conserved element locus
            uce-5479, sequence.
ACCESSION   KCKM01001697
VERSION     KCKM01001697.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 984)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 984)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..984
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26772apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>984
                     /note="ultra-conserved element locus uce-5479"
BASE COUNT          228 a          192 c          200 g          364 t
ORIGIN      
        1 ctgtacatca tttcatttcc gagcgttttc ttgtttcaaa acttgttgcg atgttagctt
       61 catgtaaaat tttaaaaaac caaaacatct ttggtttatt gcctccattt tattttccct
      121 atagcagttt ttggaaactg gacaaagctt ccatactgct gaattaaaat acagtctaat
      181 gattctctct tataggtgtc tcatgttcca tgttaaatgt ctttttttgt ttgtttttga
      241 ttttgttttg gttttaactt tttttcttct ttgtttcttg gatgtgttaa gagctggaaa
      301 tacttcagta ttcaacactg tatttttcca gttcactgag caatcaggac ttgtcaggag
      361 gtgtataatt gtttttgttc tttatatttt tttaagtttt attttatttt gtattcaatg
      421 tgattatgtg cctttaaaat gttctccctt ccattctgcc cttgtatctt tgcagtcatt
      481 gtatacagca gattctagaa agtgttaatc attgtcatct aaatggcata gttcacagag
      541 acctgaaggt cagtatctgg tgcccatcaa ttggatataa gagtttgggg gtttttcttc
      601 cgctgggtag gggcagaggg tgggttgtct gcaatgttcc cttgcctatc ctactcaccc
      661 tcacaacaag tagacgaacg aataatgcat gacgcctctt tccagtttgc aagtctacag
      721 gcctaatata catcatggca aaagggggaa tggttgccaa ccctgtcttc ttccaaggcg
      781 ctggatttat cccatgctgt ccaacgtgtc tcgtgttcta ttaaggctgt ccatgtctcg
      841 ctgtgggagg tgaactttgg ctgtgatgta tgtcagcttg cagatttaaa cgccacttct
      901 gttctgagac cctgggttgc agtagcagaa caaccggtcg cacacggctg cttagagtat
      961 gacgaaccct caggcaagtg atgc
//
LOCUS       KCKM01001698             536 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26787apa ultra-conserved element locus
            uce-3557, sequence.
ACCESSION   KCKM01001698
VERSION     KCKM01001698.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 536)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 536)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26787apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>536
                     /note="ultra-conserved element locus uce-3557"
BASE COUNT          193 a          106 c           81 g          156 t
ORIGIN      
        1 aacaacttcc ctggtgtatt accaaatata cacacctcca caacaacgac agctgtagac
       61 attctgctct ttcatagatg tgcaaaatgt gttgttgatc cattctccaa taaaaaaaag
      121 ctaaggcgcc atcacgcgaa agtctgtttt ttcctaccgg caaatgtcta taaaaataca
      181 gtcctacatc tctgtgatag ataagaaata ctgaaggagc aataataatt aatggccata
      241 caagatgaaa ccccagttgc tcagacggct gtctccacat aatctgtatt ttatacaaaa
      301 ggagaaagaa ctcaatggaa tttcagctgt gaccggataa aaactgccaa caaaaagtga
      361 taaggaaagt ctaatgtgca tattaatcat gtttatagcg cctcatttgc tgatatatta
      421 gcctaaactc cctttcgaag tacatttttg atcactagtg aaatcattta atacaatcaa
      481 acttaaatag gaccaattaa tgtttccatc ttctattaat taaaagtaat tgatta
//
LOCUS       KCKM01001699             656 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26801apa ultra-conserved element locus
            uce-6770, sequence.
ACCESSION   KCKM01001699
VERSION     KCKM01001699.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 656)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 656)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..656
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26801apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>656
                     /note="ultra-conserved element locus uce-6770"
BASE COUNT          217 a          128 c          108 g          203 t
ORIGIN      
        1 ttagaaacta ctagtaaaag ggttggccaa tttttaattg ttgattgtac aaagaatgag
       61 ccaaagaatt ttccattctt tgcatctttg ttcccctcag aagtccatta cctttcacaa
      121 agaaaatttt agctatcaaa cttgtccata aattttgccg ctgagtgtga aaccatccag
      181 ttagcatata cactatcatt tgcatatctt gaaaacacag agttagtgcc atcgaatctt
      241 gtgagtggaa cggggctctc ctcaggccag ttcgggtatg acatgcctaa aaatgaaaac
      301 agataatttt ttctgcactg aagaaccata acttcatgtg cagacagtaa gacccttggc
      361 aaaactccct tcaacatttt aagccagtcc actggatttt gtcccaaata atttcttata
      421 aatgatgttt caaaatccct gaagcacaaa ttctgatgta ggcaaaaacc ctgaaaaaat
      481 aaagtgctta cttgataaaa aattgtgtgc gtgcacacac atgtgcataa taaaaagcta
      541 gtaatttttc ttgtgataag cctccaactt tccataattt tcttttttta acaatcatgt
      601 agcaatatat tgctttgcaa aaggaagttc ttgctgaaca ggaagtgctc caagaa
//
LOCUS       KCKM01001700            1003 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26815apa ultra-conserved element locus
            uce-2169, sequence.
ACCESSION   KCKM01001700
VERSION     KCKM01001700.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1003)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1003)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1003
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26815apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1003
                     /note="ultra-conserved element locus uce-2169"
BASE COUNT          239 a          227 c          323 g          214 t
ORIGIN      
        1 ggctgttctt aaaacagatg ccagcttgta agtctgtgtt accctccgga tttgagtcct
       61 gtggctgaag aaggttgtgg cgcagccacc tttgtttcca gatctcctct gctgttccct
      121 ggagcgatca gtaacctgct ggtcccttca tttggccttt gccgccgcgt tgctgagaac
      181 acgcgcaaaa ttctcaggaa gagatggggg gcaagagtca ggagagtgaa acacctgatg
      241 gcctcttgtg tgatattaaa cagcagcgcc ctctgaaacc tgggagagcg ttccccgaaa
      301 gctgagtaga gcaacgcggg ctctggttta caggtcagcg gctcctgtgg gggcagctgg
      361 cccgtgaaga aggccggtgt agcacttgtt tccccttttg ctgacatcag gttacaagac
      421 agatccatga gcatgagcag gagaacgagt tgcgggaaca gatgtcagga tataagcgga
      481 tgcggcgcca gcaccagaag cagctgatcg ccctggaaaa caagttgaag gccgagatgg
      541 acgagcaccg cctgaagctg cagaaggagg tggagacaca tgccaacaac tcgtccatcg
      601 agctggagaa gctggccaag aagcaagtgg ctgtgatgga gaaagaggtg aggagagttg
      661 caggctcccg cgcggtacgt gaaggttgga gggagaggtg tgagccacat cgctgagaga
      721 agcctctgga agtgccactt aaacctttgg tgactgtctg gagctgccct ggctggtttt
      781 gtgacagttt cgcagctaca agtcgacctc cgttggcctc aacgggtcct gtagctgagg
      841 actgtgggct aaaagagatg ggcaaactac ctcagggctg aggcagtgac aggctgttac
      901 gcagcctgtt tcaaaatcag cgcgtttatg tggtaaatta gtggggctgg agcagtttta
      961 gcggagaggt aagaagatgg agaccctctg aaacgtgagt ggg
//
LOCUS       KCKM01001701             846 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26830apa ultra-conserved element locus
            uce-2697, sequence.
ACCESSION   KCKM01001701
VERSION     KCKM01001701.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 846)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 846)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..846
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26830apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>846
                     /note="ultra-conserved element locus uce-2697"
BASE COUNT          255 a          176 c          198 g          217 t
ORIGIN      
        1 gctataaaat atgtggcagc aagcaaatgg aaagcgcagg aaaatacagg cgaaaacagg
       61 acaataactc taaatctgaa agctgagacc tgatagagtc agttcagttg tgcaatcatt
      121 tataagatga atgacagttt aatagccact agacagtccc cggggatctg tggtttgaaa
      181 gtaaaatggg tattgtctgt acctctttag gctgttttcc agcatgttgt tgctgtaaaa
      241 gttgaagctg caactgttcc tgttgtttct tataaaactc ttgaagctgc tgctacaaag
      301 aaaaggaaag atggtaagta acaaagtgga gagccaattc agtgtccctt ttggtgtaac
      361 acacaaactg tgatttgaaa aatagcatcc ttttatctgt aatggtctga cctttagttt
      421 gaaactcaac aataaattca gtgcacactg actattcttg gcattatcgt ttgaaaagta
      481 atctccaaaa tgaactgatg aaaaacatac cattttctac acaaactaat taaaataagg
      541 caaggaatga cctttgattg taacaacaaa gccaaaatgc ccttgctgag agagcctggc
      601 gaatctctgt tgtgaaacac acacgctttc taaatgatgg ggtttgactg tattaagtgt
      661 cgctcaatac atgcacagac atcccgggaa accctctcct cctccccgct ccccagatgc
      721 gcatggcgtg ggcaggaggg agcacgcagg gtggggctgg ggtggatgct gatgcccgcc
      781 cgggactcct gagcccctgc ggtaacggag cctcggggct cgtcggtggc caactttgag
      841 ccaaaa
//
LOCUS       KCKM01001702            1163 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26846apa ultra-conserved element locus
            uce-1408, sequence.
ACCESSION   KCKM01001702
VERSION     KCKM01001702.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1163)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1163)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1163
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26846apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1163
                     /note="ultra-conserved element locus uce-1408"
BASE COUNT          322 a          213 c          272 g          356 t
ORIGIN      
        1 aattgtgttt tcaaatgtat tgataaacag caacaacacg gcttcttcta atcactgtct
       61 cttgtagccc cttgccgagg aaagccacct ccagggccgc ggcgtttcac acggagctgg
      121 aaaccacaca gctccaggta cctcatcagg cagattcccc tcattcccaa attctgagga
      181 agaccaggag tgtaggttag tgctggtgca tggccttgct ttttagcccc gtgcgggtgt
      241 gggtatgtgt gtgtaagaga gagcaagcgt gtgcgttcgt gtgtgtgtgt gtgtgcagta
      301 tgcgtgtgtg tgtcatttac aaatgcaaag ataacagcaa gttcttagtt ggcaccaaat
      361 gggggaccgt taagtatgag aaatgatgtc gatttatcat tatattatgc ctctgacagc
      421 gaaacacacc tgtacttttt atgtaattta ttgactggtt atagatgctg tgcgagagag
      481 gaaaaaatta gcgcagcttt aattactcat gctgctggtt aaaatattaa tggggcacag
      541 agtgttgcat gctcatttct gttgattttt aattagcagt aattcatttt gcacaaagca
      601 tgttgatgcc tttgccggag acattagcga agtagctgaa taaagatgtt tttgagagag
      661 ctactgtgca tacagaataa agagtgcctg ctttctgtct tgtctgataa aagttgggca
      721 aagagggaga cagatgatga aaccaaacaa tgccagagca tcatggtata gctttacatt
      781 cctgactttt acaaatttgt agtttttcag gtgcctggat ctctagaata tcggagtacc
      841 ttgttttgat tattggctta attttgtctg ttgcaaaaaa aaaacgaaga tgggtgacgg
      901 caaaaaagcc tcctgtcatt tttgccatta atgtcataaa aacattctct gatgaaaaaa
      961 ataccttcta gcaactgatg cttgaagcag atctgttaga tgggatggaa aaaactctcc
     1021 cttcttgttt ccacccttct cttcactaag gatatgtcta aatttttctg gaaatgatgg
     1081 ggaatgttct caagtgctga tgtttcaaat cctctctgag agagggataa gggatcagcg
     1141 tctcttgaag acaaatcttc tgg
//
LOCUS       KCKM01001703             348 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26860apa ultra-conserved element locus
            uce-6381, sequence.
ACCESSION   KCKM01001703
VERSION     KCKM01001703.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 348)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 348)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26860apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>348
                     /note="ultra-conserved element locus uce-6381"
BASE COUNT           97 a           58 c           89 g          104 t
ORIGIN      
        1 atttttccct aaacccagag atgacaaaga gcaatggctg cataaattgg atgtaagaag
       61 aacacttagg gtttatcaca gaagaatcaa agatttcata tcttctgaca gattgtttgt
      121 actcttaggg ggtcttaaga ggggtcaaat ggcttctaag agttccttag ctagatggtt
      181 aagggattgt attagggagg cgtatgtagt taagggtaaa gaggctccca gggtttgtaa
      241 agctcattac actaggacta tagctgcttc ttgggcggag aggtcgaagg cttccacatt
      301 ggaaatttgc aaggtggcca cctgggcttc tcttcatact ttttcatt
//
LOCUS       KCKM01001704             740 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26876apa ultra-conserved element locus
            uce-7491, sequence.
ACCESSION   KCKM01001704
VERSION     KCKM01001704.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 740)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 740)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..740
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26876apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>740
                     /note="ultra-conserved element locus uce-7491"
BASE COUNT          182 a          173 c          175 g          210 t
ORIGIN      
        1 ggctggccgc cgcggctctg cgctggctct gtgggccggg cgctgctcgg ccagccgggc
       61 tggcttacca gctgttcctg ctgctcccga caatgtccag cgtgtccgga tcaccgggtt
      121 cctgcgctcg ccgccgcgcg cagacggccc tttccgctgg ggatgcccac gtggactgca
      181 taaagtagcg gggccctcgc atggcatatg gtgtctggat tcatgcaaga tgcaaaagta
      241 ttctgccgct aatgcacaat gactcatagc attgctaatt tttcgaacaa aagccccact
      301 tccacaccca cacttttaac ccctcgggct aaaaagcctc ttctttaaag ccttggaaat
      361 gcaaggaggt ggcttctgga tcgatatatt gtttatttaa agtgggcgtg agttctaatg
      421 cttcttttaa attgcagtaa aaagcaattt tcaagtcgcc cttctaagac aggtttttaa
      481 cacttaggtt ccttgttgca tttttggaat ttttaattct ttagtagttg tatattacaa
      541 aaatagtcag aagtcagcgt aggtgatgaa aagttacttt tgtttaagtg agaatcaaag
      601 cggtgcagcc aggaaatcta caaggatcgt atattacagc gcaagttaca aagccactta
      661 ttgtaagaag cttgtaatat ccggttatct ttctgatata ccagctcttt ggggggaaaa
      721 ataatacact ttccaactag
//
LOCUS       KCKM01001705             903 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26892apa ultra-conserved element locus
            uce-319, sequence.
ACCESSION   KCKM01001705
VERSION     KCKM01001705.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 903)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 903)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..903
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26892apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>903
                     /note="ultra-conserved element locus uce-319"
BASE COUNT          272 a          199 c          174 g          258 t
ORIGIN      
        1 gggggagaga tgagaatttc agataagtgc cagtaaaaca agtttgctct acagctggca
       61 agcgctgtgc acacgttaac ggtgccttat ggcagtattc aatcaaatga ttctataaac
      121 taaaaataat caccctaata ctaataccta ttattcttca ttgttgctgg tcgctatggt
      181 gctgcatctg actatgaaga attcaccgcc attattaccc tcagtctctc tctctctctg
      241 aaatgtgatc taattgcaga atccacacct gttcgacagt tcaatagaag cctgcttttg
      301 atggaagcag actttcaagc acacacacac acacgcacgc acacaggcac acactcgcgc
      361 acaaaggcgt gagcgcacag acacacaccc caattcacgg aagacttcag ctggaggaaa
      421 aatagagtgt gagttgatca gaaaataata ttgcgaggag taaaaagaaa aaaaaaagct
      481 tgtgttttgt ggtcattgga agattgctga tgggtgcata aataaagcat gctggaacat
      541 ctgttctttg ttgtgcattc agctttttaa tgtcttcaaa gagcagcact gacgcatcac
      601 tgactaccac tccccattca agcaacattt taccagaaaa taataaacct tcctagtggg
      661 gtgcaaggag ccaaggcatt tgggcaatgc cattaatttg gaaatatctc tttttctggg
      721 atttttaaat atctctccct ttgaacgttg ttcaaatttt gggatccagc ctggagtccc
      781 tatcagcctg agcagtaaat cagcctgaat attccactca agccttttct ttctgtacca
      841 aaggctgttg ccaagtaaaa gtttatacat attttccctc tcctcttaat tgtattaatg
      901 tta
//
LOCUS       KCKM01001706            1021 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26907apa ultra-conserved element locus
            uce-1027, sequence.
ACCESSION   KCKM01001706
VERSION     KCKM01001706.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1021)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1021)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1021
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26907apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1021
                     /note="ultra-conserved element locus uce-1027"
BASE COUNT          310 a          202 c          166 g          343 t
ORIGIN      
        1 tttctctagg atatgaaaag ccaaggtttg aaaacttgcc taagagtcag atcaagtgag
       61 tctaagcagc acatcttccg ataccccagg aggctccaca ttgttccaca ctgtgcagta
      121 tgagagatga acttccactc aaagaagtac ctgagacctg aggtagtctg aagatgacac
      181 aagtcgtccc tttacatgaa ggctatagat gaatgataga aaataaaatt aattcccttg
      241 ccatcttgat cagcaccatg aagagtgagc agatatccac gtaagtgctc cttactccac
      301 gatggttaga agacaaagcc gaccactcag tgaagcagat atgatctatt tcctgttcca
      361 gctacaaagt gggacagagc catccagtaa aacttgtaga agtttctaca caaagaaaca
      421 ggtactcagg gtgggtgcag acttgatttt acaagtacat ctgttctgtt tatttttgct
      481 tctttgcagt attatcaact tctgctccat atggatgatc catattgtgc cttggtgaaa
      541 tgataccaca ttatgttttt atgcttttat catcaaacac tactcatgaa aaaatcacca
      601 ggtttgccta ggttcatctg ttcaatttat ttttccaaaa ctttattttg aataaaacac
      661 ctacggtaaa tgtgatttat gtaaatgaat aaaacaaaac agttatataa gctttctgaa
      721 tcattcagat cctttctgtt tctgttaaac cgtataaaat actctaccag catattttct
      781 ttgggttatt tcatttctaa agtcttaagg ctaaatatat gaaataatag gatatgtaca
      841 aaggctttca ttttgatttt atttccattc tctatgccaa tcttttcaga caaaacagct
      901 ctaatatttc aaagcaagtt ttacttatga gtttttccag tctctttcca aatgcctatt
      961 gcaatctttc ccttccatat tggaagtgga ctttcttttt atcttttcct acttcttctg
     1021 t
//
LOCUS       KCKM01001707             430 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26923apa ultra-conserved element locus
            uce-5038, sequence.
ACCESSION   KCKM01001707
VERSION     KCKM01001707.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 430)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 430)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26923apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>430
                     /note="ultra-conserved element locus uce-5038"
BASE COUNT          131 a           69 c           82 g          148 t
ORIGIN      
        1 taaaacatac ccccaaacat attatgaata tattgctctt cttaaaaatg cttgttggtt
       61 tttcatactc cagtattgac taactgtctg tgtttgatgt atggtttacc agcctgatgt
      121 agacttatgg ttagagctta acttgttagt tctgcttttg cagccaattc agaataacta
      181 cagatgcccc gagatattaa aattgactgc tcaaatggac tcagtgtggg agtttcattg
      241 gttttaaatt gataacagct gaaagagtga atgattaaag ctgtatatgg gcatagtatg
      301 cagctccttt gtacaagctc ttgtgaacag aacccactgt atgggaattg cctttgttct
      361 aataaaagat atttctgaac aattgttagt ttaaattttt aaatgatgaa acaagagcat
      421 ttcaggagcc
//
LOCUS       KCKM01001708            1184 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26937apa ultra-conserved element locus
            uce-7558, sequence.
ACCESSION   KCKM01001708
VERSION     KCKM01001708.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1184)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1184)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1184
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26937apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1184
                     /note="ultra-conserved element locus uce-7558"
BASE COUNT          341 a          235 c          224 g          384 t
ORIGIN      
        1 atagataaat tggaagttta aaataaacta catgagaagg taaaatatct gcagtttttc
       61 agttcaacac ttgagttgta tagatgtgct ctcattatat atgaaaatca caatgactca
      121 gtgtcctaca gcacctacat ggcttagaaa gatcaataac tgcatgtaaa ctggcctgat
      181 gaaaagatta tgcacatgca gtgcaactag gtattaaaaa tcaggctctg aagtatttgc
      241 taaaaacaga tctaactgca ttgatgtcaa gcgtgctgat tgtttttgga tatagatcta
      301 tagctttaag ttcatattca gtataaatat catatgtaat aataaacctt agaagtacat
      361 gctcaggttg tttatttgat ttattatttt atttagtgta atgctattcc atttcattcc
      421 attcttgtat ttctagttcc tctgtaacaa ccttgtaaaa gtgacaggga ggctcagatc
      481 tctgcccagc aaacaatata tattatttgc tacatgaaag tggtgcacaa ctctcttaaa
      541 tgttccctag cagactccta ttgcattcca caatgtgcct gcacttgaac cacctccatt
      601 catatcagag tctttttatc ccagcacaca ttgagcaagc tgctctgaag cttaattctc
      661 ctgacccttc agtgcagtcg gatattgtca cctaatcccc tttttttcct tctgtcccat
      721 gtgtggtttt gacttctttc tcttctcaat tcctttttcc tcttcccttt ttctttcttt
      781 cttattctat aagcctctct ccaggcttca cattccagaa ttcatccttg cattagggct
      841 gcaatacaat gctctcccag tgttaaagga ttagacatta aggagactgt ggcaactcca
      901 gccttactat atgcgcaggg ggaacataag gggatggagg agtgcctgct aaagagtaag
      961 gagactggga aacaacgggg gaaaatggca tcttagcaaa accagagcgg acgacaaaga
     1021 gatttgtgtg aggaatagtg gttgtttctg ctttgtttta aattgtctct ggaagacagt
     1081 aaaccagttg gaaagcaacg tgttacacag tgcctgcaca ctaagtgtga tgtttagttt
     1141 aacatccatc tctgaggaat ggccagtttg aagcaatcat gtgg
//
LOCUS       KCKM01001709             514 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26953apa ultra-conserved element locus
            uce-2233, sequence.
ACCESSION   KCKM01001709
VERSION     KCKM01001709.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 514)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 514)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26953apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>514
                     /note="ultra-conserved element locus uce-2233"
BASE COUNT          154 a          106 c          106 g          148 t
ORIGIN      
        1 tttttttttg aagtgcagcc ttctgatcaa tgtgcaggtt tttttttcca tttccctaaa
       61 tacatcatga aaaaggatga ggtttccgcc ttaattgctt gtgcctttta ttcacattcc
      121 tctctcagcc agaattgtga aaagagtgtt agtaaaaggc tgcacaataa agcttttcat
      181 taggcctcaa caaggcacac aaaagaaggc ttttggaaag agtgaatgca ggactttaat
      241 ttgcaggtgg agagtagata aaaggtgctg acgcctctat tattctctta cttaggtgac
      301 ccttaccccg ttcagctgat cccaactacc atggcagctg ctgccgcagc aacaccaggc
      361 ttaggcccac tccaactgca ggtaagtctg aaaacaatgc agaagaggca aaggttaagt
      421 aaatgatgaa aaacagtttt ccatttggac acaatgcaat taacaggggt ttggtctgtt
      481 cccttcaaaa gatttgcatc tgaagcaaaa taat
//
LOCUS       KCKM01001710             848 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26967apa ultra-conserved element locus
            uce-6, sequence.
ACCESSION   KCKM01001710
VERSION     KCKM01001710.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 848)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 848)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..848
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26967apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>848
                     /note="ultra-conserved element locus uce-6"
BASE COUNT          277 a          147 c          139 g          285 t
ORIGIN      
        1 ggtcatagtc tggacatcac atttttatgg gaacaaagaa agatgtggca tgcccttcac
       61 acatgctcat attaaaaatt tactaggtaa gtttcaacat ctttcaatta ataggcagat
      121 tttaaggctc ttgtaagtag tacagtagta gaaaatgcca gctgatattt tacggaaata
      181 ttccaaataa aaataccaaa taagggggag cagaacctcc aggaacatat cttcattttt
      241 ggtactttag tccacagtaa caaaaaccac attgtaccaa tcagatattt aatgagcctc
      301 taactccatt tctaccttat cccaaaggta tagcaaatag tgctgctttt ttaaaatatc
      361 aagaaaacat catttgctct aaaatgtccc taaaagcagg tctaaattgc caataaaggc
      421 taggtaattg tatcagcatg gatcagaaag catttctcag aactgatgaa atagtttgca
      481 gtattgcaga acctgaatga tgctctctgt acattacact ggaaatatca gagactggtc
      541 tcagtttaat ttgctcacta ctgtgtattt tggattctca ggaaatattt ctcgctaatg
      601 tcattctgct tttctttaaa tgtaatttgt ttggggaaag tcagatgatt tctgcaatct
      661 agggttcact tggaagaact ttttgtttat ttctcaatta tagaatacta tttttccaag
      721 aaaattgctg gtttgaaaat tctcaaatcc tgtattctta ttgtattcaa gtttttaaac
      781 atttcagatt tgaaaaacaa taattcgcaa gatcattgcc cagcttatca gttctgcctc
      841 agtagtta
//
LOCUS       KCKM01001711             359 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26983apa ultra-conserved element locus
            uce-2593, sequence.
ACCESSION   KCKM01001711
VERSION     KCKM01001711.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 359)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 359)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26983apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>359
                     /note="ultra-conserved element locus uce-2593"
BASE COUNT           69 a           94 c           98 g           98 t
ORIGIN      
        1 tcctcgcgct cttcctcggc gcggcttgcc ggctaatggg gcggagctcc cgctcgcgct
       61 ctctattaat ggagcagagt ataaacagaa taaagccttc atttcccggg ctgtgatttc
      121 attattaata tactttacag ttcacaggtt gttcatttgc ttccatgttt tctcagctgg
      181 cgtaatctgc ggcgcggagt gagaagagtc ataaaatttc catttccagt tgaatgtgcg
      241 tccaattcgc cgtgaaatgt ttctctctgt cgtgaatatt aagcggccga ggagtcgctc
      301 gcggcgggat caggcagggc gggttgccaa cccctctccg cgtcccccgg gggagcgag
//
LOCUS       KCKM01001712             655 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 26999apa ultra-conserved element locus
            uce-4839, sequence.
ACCESSION   KCKM01001712
VERSION     KCKM01001712.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 655)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 655)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..655
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26999apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>655
                     /note="ultra-conserved element locus uce-4839"
BASE COUNT          206 a          100 c          133 g          216 t
ORIGIN      
        1 gggtttgtct acagaaaaat acaagtattt tctttgttca tgtttacttt gttgccaaca
       61 catctatgac cttattttca aattaatcct aggttattgt gcaatgaggt gcaatttgtt
      121 catttatatg aaccttatgt ggattgaaaa aatcaagata aatcttcatg cacagcatac
      181 aatcagatta cccctggact atatatttac gttgggtctg atagcaatca atggtttagc
      241 ttcattgcat ttcaagatgt atttgcaccc agtgtccagt gatagtgtcc tcaccctgga
      301 aataatttag ttgcaaattg actggaagat ggtgaaaatt gaaagttaaa attagaaata
      361 ctcataataa acagcagaaa aaaggtcaga tgatgccgca ctatgatgag attggaatgg
      421 ttggtaaatg aggttttgtg tttgtcgtga gatgtatgtg acatgcctac ccaatgctct
      481 tgtaatatcc agcctagcag aagagattat ctggcaaatt gacgctggaa agaattttct
      541 gatggactgg gaaattagaa ttgcactctt ttctttgatg tgtgcaagac tgggccgcat
      601 tacacagcta gttcaggcat agtattaaat atagtattta atacttaata gtaga
//
LOCUS       KCKM01001713             809 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27014apa ultra-conserved element locus
            uce-5142, sequence.
ACCESSION   KCKM01001713
VERSION     KCKM01001713.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 809)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 809)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..809
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27014apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>809
                     /note="ultra-conserved element locus uce-5142"
BASE COUNT          225 a          183 c          155 g          246 t
ORIGIN      
        1 ggtttaggaa tatactaaat tgcatcaaaa aaggaagaat attcttgttg caggttatca
       61 gcctttctcc tactatactt attctcttct tgtcacagac atgttttatt ttgccacagc
      121 aatacactat taaaacttaa aattcacatt cacctgaaga aagctgtgac atgcctacca
      181 agagagacat atactgctta acctaaattg accctttttt ccttctattc taatagatct
      241 tttttctttt tgtcactcaa aatgagtgtt tgatgtatga gcataaattg ttaaaagcag
      301 ttttaggtaa aggaagagag agtgaagtgg agttttctca caaaagccaa cctcaattta
      361 tgtcaaagag ggttaaaaga ccttgggatt aaagcaataa acttgctgct gtcaaagcta
      421 aaacccgcta acaatttagt gccaaacgca tgttgttcaa tatcatttca tattatatta
      481 tgtcacaagt aggtgacagt tccgcatcag actgacaggg ctgatttact ctgaagaatt
      541 catcgacatt ttgcagagtc aaagctgact tcattttgtt tggatgcagg gtgggaaatc
      601 tctctctgct tgagccagga tatttggctg aataaagcag cctcccttgc agcacccacc
      661 gctggctttt gaggagctgc tggcccaggg gtcccttccc tgccctcctg gcacagagac
      721 ctctggcacc acagctggag gctcctctcc ttcgtttgcc ccaaacagca ccaacttctg
      781 cacccgtgcc ctttcgtgtg gctgcactt
//
LOCUS       KCKM01001714             895 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27030apa ultra-conserved element locus
            uce-497, sequence.
ACCESSION   KCKM01001714
VERSION     KCKM01001714.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 895)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 895)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..895
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27030apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>895
                     /note="ultra-conserved element locus uce-497"
BASE COUNT          300 a          170 c          170 g          255 t
ORIGIN      
        1 ttttttctgt ggggcgtaaa agcagaaggg ggaagcacgg ccgcagccaa gtgccacgac
       61 cctctgtcct acagcggcag cgtttccttc tccgtctttc gggaggacag cacgtagtct
      121 gctacctcag ccagctcgag tggggcttag gaaaggtttt atttacaacg tgtcgcttga
      181 aaaagtcccc gacaaaaaag gcgtacggca ttttatacta aaagaataaa gatttttatt
      241 aagcactgta agttgcattc aatagccttc aaatacacca caccacaatc catctacaac
      301 caaccaaacc caacagtagt tcattcttgc acaatccatg agttggggca gaactccctt
      361 caacttacat taagatacct acttagctct tgcgggcagg gaatggggaa ttacacctca
      421 tttctgatca ctaatgtgtg atgaagagca tcaggagaat tatatgaaaa cgaatataaa
      481 gaaatgattc tgattttgaa gtacattaag tttggaaaca ctaacaaaaa catcaaaatg
      541 atacaggtat atttgcttat actaaattct tgatgggaaa gttctcaaga acaagccatt
      601 tgtttcctgc tacagaaggg gggtactttt ttttttttga agatcaaagc tttttttgtt
      661 tttcacagaa tttcatattt gctaatatga aggcataaaa cagcaacaga gaacaataat
      721 gcatacagca atgagtacac cagggtaacg ttgatattca aaacggctag ataacttttt
      781 ttttttaaaa gttttagaat aaatgcaaca gaggtcaata atcacaaaat tttaaggtta
      841 gagcaagatc agtcaatgac taaacatagt taacatcttt tataggacta ttact
//
LOCUS       KCKM01001715             698 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27045apa ultra-conserved element locus
            uce-3330, sequence.
ACCESSION   KCKM01001715
VERSION     KCKM01001715.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 698)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 698)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..698
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27045apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>698
                     /note="ultra-conserved element locus uce-3330"
BASE COUNT          240 a          122 c          118 g          218 t
ORIGIN      
        1 aatatgtaac agtaagctgt cctgtgtctt gtacatgtga gactgcttta gctactaaga
       61 aattcttgct tacactaagt gattcagtat ctacattcac agtgtgtttt tgtacgttct
      121 aaccaattct cagctacttt atttatggac tttaactggt gacaaaaaaa taaatgattc
      181 aaaaaaagta tcagcttaga aaactgacaa atatgcagca aaagattatg gaaacatgca
      241 gtggttttgc taaaattaac aacagtaaat agaaaaatgt aactgatgta ttaccagttt
      301 gtgccataaa tttagcagca tcagcttgtt cctgagggac ccttttctca tgaacagatc
      361 gaggtcgctg acttttaatt gtatgatctc ccatcattcc aaattctaaa gacagaataa
      421 aggtttatga aagcttgtgt gtagacattt ctcaaaagtc acatactgtc tcatgcaata
      481 tgttcctaaa catacctgga agttgctggt aagagtccgg caagtgatta tggcagttaa
      541 catcagttta actttgctac actcagcttt taataaatac ctagtgtctg cagattttca
      601 aacacgattt tattgtatga accaacattc aatgtagcga cacatagtat aaatcagctg
      661 tatgacacgg aacaaaaaca aatattcaaa tgagacat
//
LOCUS       KCKM01001716             917 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27060apa ultra-conserved element locus
            uce-3436, sequence.
ACCESSION   KCKM01001716
VERSION     KCKM01001716.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 917)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 917)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..917
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27060apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>917
                     /note="ultra-conserved element locus uce-3436"
BASE COUNT          287 a          162 c          181 g          287 t
ORIGIN      
        1 gtcaattttt ctaaaactat attaaaacaa agactacact tagcgacaga ttaaagaggc
       61 taaaacaagt agttcagcgc tcagaacttc atagatcctt gtttcgtacc atttctccag
      121 cttatgtggg ttattaagag cagcgcatct acttagatct gttagaaaga gaccataaga
      181 gttgctgcaa cgagataaag atggattggc cacttttaag tcatatttcc tttcttgtgt
      241 atatttagct aagactttta tcgttacttt tggagagtct tgggggagag tgttgctttt
      301 tatcggtttt ttgtttgcat tgataccaat atactggctt tgggatactt tgggaatatc
      361 atgtcaccac atttgagtat gggcactgga caatagcaag taccaataac tgccctgttt
      421 gatcttctgc agttctcagt ctttctaaca gcaataatca ggcagaagga tgaaaagact
      481 gattttcagg gaattagcat gataagcaag aacacaaaat caatcccaat ccttgtgagg
      541 ccgcctctga ttgctttgaa ctgtcaaaaa atggcagaat caaatcgaaa gtgcttgagg
      601 ttacgggagt gatttgttca agaagagatc gctagagcaa ttgacacagc tcttgagaca
      661 ataattgggt tatcaaagag aaaacagttc aagtaccaca ggggtgaagg cttatttgca
      721 ttggattttc atacagccag gcacacctcg atttgaaagc ctccattttt atatacttga
      781 agattaaaag gactcaaaat tgcatcatta tcatttgaaa ctttggttct tagcacatta
      841 ctttttattt aaccagcaaa actttgaaac catgcttttc atgaagtacg ttcgaattaa
      901 aaattcagga cactgtt
//
LOCUS       KCKM01001717            1025 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27076apa ultra-conserved element locus
            uce-2991, sequence.
ACCESSION   KCKM01001717
VERSION     KCKM01001717.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1025)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1025)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1025
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27076apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1025
                     /note="ultra-conserved element locus uce-2991"
BASE COUNT          290 a          176 c          196 g          363 t
ORIGIN      
        1 tactgatttc ttctcaactg aggtggatgg agctttttca tagcagaaag agtgttgaac
       61 tgtactggag ataacgcatg tgaatgttta gtctgaactg tcacccagct ttctctctta
      121 gcaaagaatt gttgatgtca gataagcatt taccaaacta gtaaagaaca atgtgtggat
      181 gtggaggtga ctcactttgt gtccatgact cttgttgtag gtgtattagt gagttccacg
      241 taagatattg aactgccttt aatattgagc atttaactgc atttctgact aacattgagc
      301 tttcagactc atatcctcct gacagtttca aagtggtttt gactgtgttc aactcctttc
      361 cctgtagggg gttaatctca taaagatttc agccacacaa gtactggtgt caggggtata
      421 atgatcactt tgaagtttgt ttgctttcca gtgcatttaa acactttaag tgttccagaa
      481 ataggattag atgccccagt gaattcattt catttacccc cagcagtggt tttccaatac
      541 tatatggtgt ttacatggta tcaatttagt ggcatgctga tttccaagat tcatcccctc
      601 ccctatcaat tttctacctc ttgatcctac ttgaaaattg ctgtgatatt gggcaaatgg
      661 tactgaaaga aggattattt gaattctagt atttatttgt ttcagatatc tttctgggat
      721 tttcttctat ggaattcttc gtaaaatcaa atttagtgac aaaaaatcaa ctgttagagt
      781 aagtagatgt tttgaatcct gagaaaggct acatgtttaa atgtgaaaaa cttattcctt
      841 ccttaagcag acaggcattg cttaaataat gatttacact ttttcttttt ttctgagtta
      901 cagattttgc caattataaa gttatacatg cattttaggt gagaaaccat aagagctggg
      961 cacacgtgat tatcttgctt ttctctaaca gcataaccat gttatacagg aagagggaaa
     1021 tgctt
//
LOCUS       KCKM01001718             793 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27092apa ultra-conserved element locus
            uce-3547, sequence.
ACCESSION   KCKM01001718
VERSION     KCKM01001718.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 793)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 793)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..793
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27092apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>793
                     /note="ultra-conserved element locus uce-3547"
BASE COUNT          251 a          168 c          152 g          222 t
ORIGIN      
        1 cagggttttc cgaatgccag catgaaaaca aactcccatc aaaactgagt ggctctgcca
       61 agttcaaaag gtgaaataaa tgaatcttta cacattataa gaacaaaatc aacattcttc
      121 tgtggcataa agtgcctgaa aaactagcaa gtaaaagcag gtgtgatgtg ctccctgtca
      181 gctaacgaca ctgataagct tgccatgcct ggttctgctt catttcaaac agactgctgg
      241 aaaaaagggg gaaaagccag agcagaaata attgctggag cttcgagtta gctgagagag
      301 cctgcaggct aagatcaacg cgactgattt catcctcttc cttttatttc tataacctta
      361 aacgttctgc tattataaaa gtcatcatgt cagctttccc ccaagcctta gcagcggcct
      421 attttaaaat tgtatcaatt ggtaaagctc tggctggagt attttcatcc tgctttatgg
      481 tttttgagcc ttaaagatga agaaaactcc actgacctga tccaagcatc tatgcgcgtt
      541 gtcccacgca tatgtttata atcaaaccct acagaaacaa cacacgctta gggaagcttt
      601 aaaattacag ggaaagcagc aaattgcaag tgagtgctgt ttatcctgca tttgtctcca
      661 acagaaaaac accacctatt cagattctaa atgttttctt tctctgctta atatctggga
      721 tttggcactt cctgaggcca ttgataaggt aaggggttta gaattaaaaa actcgtaaat
      781 cagcgtaaca aat
//
LOCUS       KCKM01001719             893 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27108apa ultra-conserved element locus
            uce-5287, sequence.
ACCESSION   KCKM01001719
VERSION     KCKM01001719.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 893)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 893)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..893
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27108apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>893
                     /note="ultra-conserved element locus uce-5287"
BASE COUNT          269 a          151 c          157 g          316 t
ORIGIN      
        1 aacagtttct gagagttggt gggatgattt ataacatttt tatatttact tcaactttgc
       61 ttcccaaaat tacacttact ttcctctaaa aattgccatt attctttggc tattctttta
      121 ttgcaaaatt attcactcaa tttctggtta gaaaaacttt gctggaatga aatgatcttt
      181 cagaacagtg taccttttta tgtttccagt attaactaac cactcagggt gtgatcttgt
      241 tgaaatcaga ggattttcta ttatacggga gtggaaatat ttagcttctt tctcctctct
      301 cagaaaacaa accacatcct ggaaaaagaa atgttttaca cagaatttat acatgataag
      361 aaattcattc cacaagtgga gtaagacctt taaaagacct ttatctacct cacagaataa
      421 atttgatatg ccttacaaac cattatgtga actcttcctc tcagtgcatg cagatgcaac
      481 tctctctcct aagtgctaac accataattt ccattccaat gatgaaatcg ggtgtgaggg
      541 gggacaagtt tattgtaatg catttgtata tgattacata tgagattgta aaattttaac
      601 atttatttag cttcttctaa tatgcttttc aaaacctaat aaatctgagc agcttaaaac
      661 atctgtttgc tctggaagat catttggtaa ggttggacat cctgctgatg gggctgctga
      721 gactgtttaa agagcctggt tgatactcac agtgcatgtt acaagagggc tgttctttgg
      781 gaaatttttg gtttgcacag tttgaaagca caagatatcg aaagattgag tttcatgtac
      841 gtgaattttt tctctagaag tttttccggg aatgttgtta acaaagtgta tca
//
LOCUS       KCKM01001720             203 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27124apa ultra-conserved element locus
            uce-1234, sequence.
ACCESSION   KCKM01001720
VERSION     KCKM01001720.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 203)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 203)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27124apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>203
                     /note="ultra-conserved element locus uce-1234"
BASE COUNT           67 a           34 c           27 g           75 t
ORIGIN      
        1 tattagtata ttcttaattt ccttttaatt gaaaaagaca tattgacttt aattagaacc
       61 atttcacagg aactgtcaat tagcacatgt caaactagtt aattcagaac agaattcttt
      121 taattagggt ctgctttcct ttaactgtgg ggccaatgaa atcagccttt ccttatcaag
      181 attttaaatg tctctaagac ata
//
LOCUS       KCKM01001721             642 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27138apa ultra-conserved element locus
            uce-5116, sequence.
ACCESSION   KCKM01001721
VERSION     KCKM01001721.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 642)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 642)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27138apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>642
                     /note="ultra-conserved element locus uce-5116"
BASE COUNT          211 a          122 c          138 g          171 t
ORIGIN      
        1 aataaacggc atatcaaaac aatggatgta ttttaccatg tcatgtagat gaaggactaa
       61 tatggaaaag ggatttttta gatataattt ttctaaggac tcaaacactt tcttgaagat
      121 tataaggtaa ggcataaaaa atgtgagtac tcttgaaggc tctacatttt acagtagcag
      181 tggaagaaag aaataaccta gatgcacagc tgggcagtcc ggtcaccagg tacaggcagg
      241 aagcagaagc tgatttttct acatagaaat cgcacacagg actacaaatt tcaggcaaaa
      301 gttagcacta acttgttaat gaaatagcaa gtgagtagtg aaaatctttg gacgtaaatg
      361 gagctccaaa gtgagtctca gacttcagta gccaaaaata aaccagttct tggctgaaag
      421 acataagtgc tattgtgaaa ttgatatccc tccttggctt attcccagac aatatgttgc
      481 ctttctgggg gctgatcaat gtgattgatg tgatgtgtga aatccaggag ggagctcccc
      541 tttaatcaaa cccaccgtcc tccactgatg ggcagctgtg gactaacatg ttcttcctcc
      601 tcgctccctc cggctcccct tagaaattgg aaaaaaaaag ag
//
LOCUS       KCKM01001722             667 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27153apa ultra-conserved element locus
            uce-4970, sequence.
ACCESSION   KCKM01001722
VERSION     KCKM01001722.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 667)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 667)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..667
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27153apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>667
                     /note="ultra-conserved element locus uce-4970"
BASE COUNT          216 a          113 c          119 g          219 t
ORIGIN      
        1 gaggaaaggt tagaaaactg agcagccttt atttcacatg ttctaagggg tggttcagtg
       61 gtaggtgttc ttgtgcactt ttataaaagg gatctcagag aaaataagca gaaaggcata
      121 acaataatat gaaggttaga attaagagtc gtattttatg aatcatttac acaatggtca
      181 ccatctcttt ttaaccagca agactgctta gataagggaa tattgtttgg cactagctcc
      241 agtgttattc gtgataatga acacaaaccc catctgtaat gacaacatga tgtttctttc
      301 tgtagaattt ctttcctaca tttgaatcaa acattgatga aagctctgct gccagcagct
      361 gttcagagac aatttaattc cagctgtgat aattcaccgt gtcagacatt ggctgttata
      421 tgttgataca acagttctcc agatttgcat ttttatcaaa aggaacaaat gttttgaaca
      481 tttcagtaca gatggcattt aagcatgcac acaatttttt tttacatgtg caagatataa
      541 atatctgaga agttaataac tttaaaaaat gtgattggta agataaatcc cacaaatgtt
      601 ataccatctt ttggtcataa cagcaccttt ctgcaatccc aaattgcata ctattcaggc
      661 tcttttt
//
LOCUS       KCKM01001723             483 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27169apa ultra-conserved element locus
            uce-4500, sequence.
ACCESSION   KCKM01001723
VERSION     KCKM01001723.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 483)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 483)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27169apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>483
                     /note="ultra-conserved element locus uce-4500"
BASE COUNT          150 a           74 c           91 g          168 t
ORIGIN      
        1 tttaaaattc tggtattgct gtccgtcata cagaaacgtg atactagttc ctgtaaagtt
       61 agtaatcctc gtgcttatgc agtgttatgt agtaaggctc ctgaccggtg taagcacgga
      121 gatttggtta ttatgtagaa gagttataat aagaaatatg actgcaaaag caaagcagtc
      181 agttgaaatt ggtctataat taaatgctta gaaaattctg tgcttagctc attttaaaat
      241 caagtgcttc tttgtagcaa tttcctttct ttaattacaa tttcctgtct agtttgacat
      301 ttacaatgca atcttggggg acatgtttgt gatttattat tcttgctcct atcaggatat
      361 cactcggcag aaatgagttt ataaaataag agctcaaatt attatggcct ttgaccaata
      421 aagctggctc ataatttcag gcctgagaaa agattaacat ttttgacaat caaatgcgga
      481 att
//
LOCUS       KCKM01001724             967 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27185apa ultra-conserved element locus
            uce-1110, sequence.
ACCESSION   KCKM01001724
VERSION     KCKM01001724.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 967)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 967)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..967
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27185apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>967
                     /note="ultra-conserved element locus uce-1110"
BASE COUNT          323 a          170 c          171 g          303 t
ORIGIN      
        1 tctaatttgt atgctacttc taccttccag gagatggaaa gttgtgtatg tgagcattta
       61 acagacaagg agtgcttaaa cctgacgccc tttatttttc catactggac agatgtaagc
      121 tgccatgatg gcagtcgccc aacagtatct tccaaataat tttgagtcct ttctgacatg
      181 aagtagtata tttaaagtac ggtgtcttag ggagattttc actttaaata gaataagggt
      241 taaatgataa cttgacttat cttttaaatg acaaaaaata aagaaattgc aagacctttt
      301 cacacattag atatgtattg tcatttatca tctagatatc aggctagcag tgcgaagtaa
      361 taaaacatat catcgaaaaa tgtgctatag gtctgaatca ctctttcatt ccacctccca
      421 gctaactgta gtattaaatc aaacaagcag aacatttcct taggcagcca ttgcctttta
      481 atttcctgaa gaaccttaaa atatcattca ttacaagtac tacacatatt tggtttttaa
      541 aagtctcata aatcaatagc aggctgactg taataattat tacaagttag tgcataattt
      601 tcgtgctgaa ggctgcatgc agaactttag catatgcaaa cgaggcaatt caaactgtgt
      661 atagatatta atatgaagaa gcaggtaacg aggtgcaggc tatgaattat gcatcaagag
      721 cggctgatct tcaatgagga aaatgaattc agcatgtaat ctaattagtg atggaagtct
      781 attacatcta actgcaaaag caaccgtcct tgaaacaaat ttatttacag tccatgttac
      841 cacttgaaac aactttgaaa tgatgtgtaa gacaacagct taattgtaaa aatttttttg
      901 tttgtttgtt tcagttctag acctggaagg cctcctaaga ggactcaaag tgtcacctcc
      961 cctgaga
//
LOCUS       KCKM01001725             365 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27200apa ultra-conserved element locus
            uce-3596, sequence.
ACCESSION   KCKM01001725
VERSION     KCKM01001725.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 365)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 365)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27200apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>365
                     /note="ultra-conserved element locus uce-3596"
BASE COUNT          119 a           80 c           71 g           95 t
ORIGIN      
        1 tcacacagca tgcatcccga caccaacccc agcagcaaca acagaaaaac cctgggacta
       61 acggaaaatg tatctgtggg actaaaagat acctcaggat cccaggatcc tgctttctgc
      121 agtcccaggt tgcattccct agttaagcac catcaatatc aatacttaat agtattctct
      181 aagctcaggc agtgaagaaa atagggttgt tatctatcaa agcacatttt agtttttgac
      241 aagtaaaaag cagcatgggg aatgcagtaa gtctgaaatg aaagcctaaa agaaaactca
      301 tataacatct ggtgtcattt atcccctgtt ggcctttcat agtgtgatat gatgagcttg
      361 ttctg
//
LOCUS       KCKM01001726             663 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27216apa ultra-conserved element locus
            uce-1040, sequence.
ACCESSION   KCKM01001726
VERSION     KCKM01001726.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 663)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 663)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..663
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27216apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>663
                     /note="ultra-conserved element locus uce-1040"
BASE COUNT          201 a          124 c          155 g          183 t
ORIGIN      
        1 gaggaaaatg tcatcgcttt aaatattaac agttggtaaa agttcttttt cactgaggcg
       61 cgtgtgatga agaggaattg aggaaaagac agggaaatat acagaattta aaaataattt
      121 gcacgagaag gagcttcgct ccctgaagcg agcggcttaa aagcgaacgc gtctcgcgcc
      181 ggactttttt actggaacgg tgaaatatat aatgaaattc aacaaggaaa ctggaaaaac
      241 agccaaattg gtgcagcaaa gtggttaata ggatcattag cctcctcgct gtattttttt
      301 ggacattgtg tgcctgtacc gtagtcctcg agagcagatt gcgggaacag gctgacagtt
      361 acccgctaac tcagcagtgc tgggtgcaaa ctgccatctt cctgtggatt tacagctgcc
      421 acttctgcta cttcaattag ttctatagca cacagatgtt gcttaaatgt tgctgctaat
      481 gatactgcaa taagcgtaag attcatgcca tattttgagg cacgtaaatt tctcaagtgg
      541 cacaattaaa gtggaaatat taggtgggga gaacttggca gtctctccaa cttggaaagc
      601 gcacccgcta tgcaataatg ggtcaaaaat tcattcaagt tttactgctg ttcagagttt
      661 taa
//
LOCUS       KCKM01001727             659 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27232apa ultra-conserved element locus
            uce-300, sequence.
ACCESSION   KCKM01001727
VERSION     KCKM01001727.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 659)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 659)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..659
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27232apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>659
                     /note="ultra-conserved element locus uce-300"
BASE COUNT          208 a          139 c          131 g          181 t
ORIGIN      
        1 ctaatgatct gggagctagc tgggattcgg agacaaatac taaacataat caatacatat
       61 ttttttttaa aaaaagagat ttttttttcc taaaaaagaa aaaaaaaaaa gcaatgaaaa
      121 tttatgacct taacattcct tcagggtcaa gcaatttatc aaattctctc actttctggt
      181 ttcaattaca cagctattgt ggaaggaact tattttagca ggttcatttg cctcagtagg
      241 gaatacagga ctttggccta atgcttcacc tttagtgcag gccatttgag ccttagaaca
      301 aataccaatc atcactcttt gggaaaaaaa taaaaatctg catcggcgtg gcctgttgga
      361 atggggtttc tgtcaaggta aacggttgtc ggcaatgact gtggtagagt ggcgataaat
      421 cccattttat tgctgaaaaa ttccagcttc tctccatgcc tgacagctcc ccacattctc
      481 gtacccattt gggcaatttc tgcactatgt ccatctggtt acctctcaac ctgccagtgt
      541 ctgatccaga aaaagtgcag gtcaaaaaca ggggaaagaa accaaggtga tggacaaaac
      601 agaaagagag tgattgagag accgagccgc gctccctgat cctccctcca cagccagaa
//
LOCUS       KCKM01001728            1031 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27248apa ultra-conserved element locus
            uce-2248, sequence.
ACCESSION   KCKM01001728
VERSION     KCKM01001728.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1031)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1031)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1031
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27248apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1031
                     /note="ultra-conserved element locus uce-2248"
BASE COUNT          332 a          172 c          197 g          330 t
ORIGIN      
        1 tgagtgctag tcaaaggtac agttccaaca gagtctgatt aacattctcc tataaaataa
       61 ggaccagaga gtaagccatt aattttatgg ctattttttc ccactgcttg gtttttcgta
      121 agttggactt ccttccaggc taattaacca ctaaacattt tacaagcaat ccaagtgcgg
      181 aagcagtaaa agatgaattg cacttatgaa gtaattgaca aagggtatat tgggcctttt
      241 aagcaatgat attgtgcatc ttaatacagg aagaaaggat cctttgtact gcagtttgat
      301 aggtcattag ttaattctca gaactctgca caagataata atgactcaag gctaaaatga
      361 agctgcctgg attggggtgg ggaaccctac ctcaaaacat ctccagagaa aacacttaat
      421 gtttgtgtct tggcattatc aaaatacccc ctgtgttatc ttagattaat tccctggcta
      481 ttttcttttc ttttgacagc aaagtcagag ctgacaaacc aaggcagttc tcaaggaaat
      541 tcaattactg aaatgtctga cagcttgctt tgctgcttct aactaaagtt ttgaaagtta
      601 catgctgcat gtataatatg gttttcacta caaaggaata gatttgcatt ttctaggggg
      661 aaaatcattt taaagctgta ggagtctaat gataaaagat aaaaaatgaa atgctgaagt
      721 ccctattttg caaaaaaatg aagtaagttg agtggctgcc acatgaaact aggaaaacac
      781 tgtattctta aaagcagaat ttacttgctt ttccatgtaa atgaaggaat gtcagtcaat
      841 ctgaacagta cttgcatgta tcagtttcta attagtctat atgatgcaag atgcaaaggt
      901 ttataaactt ctcagtaacc aggaacactt tatttgttca tatctcagcg tcaataacct
      961 gagctctgga ttctgtgaag tagtttctct gtgtttgtca tttaattact tttagaggtg
     1021 ggaaaattat g
//
LOCUS       KCKM01001729             533 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27263apa ultra-conserved element locus
            uce-7950, sequence.
ACCESSION   KCKM01001729
VERSION     KCKM01001729.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 533)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 533)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..533
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27263apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>533
                     /note="ultra-conserved element locus uce-7950"
BASE COUNT          138 a           75 c          114 g          206 t
ORIGIN      
        1 tctggtctaa tttgatgttg acttcttgct gatactatca ataaatgatt gtgctttcag
       61 aggagagctg atgtagttta agactagact tttacgtact gcattttgat tatgaatgtg
      121 gaattttaaa gcgttcttgc agcttgctag tgcgcttgaa gacttaagta aatgttttgt
      181 tgttgcatga ttgttctaaa gttgaagagt taaaagaaga gagattgtgt ttgtttgctt
      241 ttgaaataat gttttttttt tctccaaaag ccttttgtaa ccattttatg tattctgttt
      301 tataacaagt ggatagattt tacagttatg tgctgtgcgg cctgtcaatc agttcagtct
      361 gacagctgtc aatcactgac acgcaaatat tatgggattc cctagtgagg aaagaattgg
      421 tatctctgtg tggtgacttt agcctcccgc agttccggta ctttaaattt ttttagtttt
      481 ttaccttgtg aagtgatgag agttgtacct gcaatgtgtt aactgccaaa aaa
//
LOCUS       KCKM01001730            1049 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27279apa ultra-conserved element locus
            uce-4600, sequence.
ACCESSION   KCKM01001730
VERSION     KCKM01001730.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1049)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1049)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1049
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27279apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1049
                     /note="ultra-conserved element locus uce-4600"
BASE COUNT          285 a          227 c          214 g          323 t
ORIGIN      
        1 ctggtaagta atgagatggt attcctgcaa gctcagatgt tagcttcgat gatagcacct
       61 caaagaaaac tgaagtggga aaaagcatgt actacaagaa tgtccccaga tactctccaa
      121 acatgcattt tcttaagtat gggaaagtag aaagtatatt tagaaagtct gaatggcact
      181 tacctctcaa gaagtgctgg taagaaggaa gtgactcaaa tatgctgttt gaagccattg
      241 tttcctcttt aaaattcact ctctctgtac agtgaaggaa tatatgattt cttctacctt
      301 ggggagtgaa aaatgaagaa cggtcattgc taccaccctc ctcccagcca tcacgttctg
      361 ttttatccca gtgcctcagg agctgcacaa agtggattat aaagttcttt tactaaaaga
      421 actccgaaat tgtttcttaa aaagaaaaaa aaatagcgga tcggttgtgg ttgatgatgc
      481 ttaccactct acgaaactct gtggtttgca gtcaaaacga ttcgccctgc ctgctgacca
      541 atatcccgga cccgctcttg tgtgactgcc tctgtaccca acttgtggtt ctgtggttgt
      601 ttatgaggcc caaagaagtg tttcacacaa ccaaaattac aaatttaact gttccccttt
      661 ccagaccctg cctccattgg tccctttgta tcacgtgact tgagtgatgt cgactttctt
      721 ttttttttta actttctgaa gtcatgccct acccactcca cctgccctcc ccggggctgt
      781 gagaggcagt gatggactct gctgagggag ggaaaagcaa aatgactcac cgtccctgat
      841 gctacaaatg gtcttgctga gttagttcaa ctcctcttgt tttgttgttt gtggtttttg
      901 gaactactga ttattttgat agagatttca ttgctgctta ttcaatagta attcaaaccc
      961 gggtattact ctgctgctct gctcttacta cttaaacagg atgtgtaagt cattctgtaa
     1021 aacattggga atcagctata ggaaagacc
//
LOCUS       KCKM01001731             841 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27295apa ultra-conserved element locus
            uce-5208, sequence.
ACCESSION   KCKM01001731
VERSION     KCKM01001731.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 841)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 841)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..841
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27295apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>841
                     /note="ultra-conserved element locus uce-5208"
BASE COUNT          269 a          128 c          154 g          290 t
ORIGIN      
        1 tgatagaaaa gaatttttgt ggagataata atccaatgta tttggggatc tctggaataa
       61 gtaaggacat agatattttt tcatgttttt tttcccctga atgtattctg agtttcttaa
      121 taagtgttac tttctacatt taagttcaaa aatttgtgtc attatgaaca ataccttctt
      181 agtgatatta gaagtgcatt ttcccattgt tttagcagag gggagccacc taaaattctt
      241 atttaatgtg ctttctttgg gtttcctgtg cttctttaat aaaaatatat tgctagacct
      301 acctaaatat attgttttca acctgacaaa gttacataag agaatcccct tgtacttaaa
      361 gagaaatgca attattttct atgctgaatc tcgagactgc tgttttagaa aatcatatct
      421 gattatttgc tcagcagaag attattgagt tgatttagct gtgattttac ttaacaaagc
      481 ttcaactgaa ttcctactgt ggagtccaaa aaaggtagag agatataaat gatacattca
      541 aactgtgatt tttgtgaaca gggccatcaa tgcacccctc ggagctaata gcggagatga
      601 gaaacagtgg gtttgcactg aaacaaaatg tactggggag aaacttgacc gtaaatgatc
      661 catcacaggt aatgatcttt ttaccagtaa gctgaaaatg tctgtaaatc taaatgtgat
      721 tgcttgtgaa ttgctactta atgttttcaa atatgcatat ccataggaaa gctgaacagc
      781 tataccagta gaaaaatatc caaaaactta ctgttttccg gctttggttt agtcagaatg
      841 g
//
LOCUS       KCKM01001732             446 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27310apa ultra-conserved element locus
            uce-6734, sequence.
ACCESSION   KCKM01001732
VERSION     KCKM01001732.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 446)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 446)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27310apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>446
                     /note="ultra-conserved element locus uce-6734"
BASE COUNT           87 a          108 c          103 g          148 t
ORIGIN      
        1 ccggcccctc ctccgcagcc cccgggctcg cccgccctgc tcgggagtgt gggtccctgc
       61 cgggagccgc cgcgcctggc gcacagaggg aagcgttgat gcatcgctgt ggaaattcat
      121 tgtgtgactt tctgggtatt tactgagttt cagaccgaga tgcagctctt gaaagcttta
      181 tgggcactag caggagcagc gatctgctgt tttcttatat ttgtcatcca ctcacagttt
      241 cttaaagaag gtaattatat ctgcatgtct ccataccctg ttcgttaata cgaaggtctt
      301 tacgaggtgc cttaattatt tttactgttt ccagtatgtt ctatttacag cagtgcttcc
      361 acgctatttt tcctttccgt taaagcctca tttttgttcc tttagataat aggtagcttt
      421 agacttagat tcttgttaaa tgtgtg
//
LOCUS       KCKM01001733             737 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27325apa ultra-conserved element locus
            uce-4030, sequence.
ACCESSION   KCKM01001733
VERSION     KCKM01001733.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 737)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 737)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..737
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27325apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>737
                     /note="ultra-conserved element locus uce-4030"
BASE COUNT          249 a          161 c          134 g          193 t
ORIGIN      
        1 cctgctccaa gatgggctac aacatgtttc tactttaaga agaaacacat cacacaatgt
       61 caaagcgttt tcagagaaat ttcaagtaac agagtccttg ttctttaaaa agtaaaccaa
      121 cagggtctgc aagaggtcac aggcattcac taagttacct acctaaataa tatgaattta
      181 cacactggaa agtctataca gttgaaagca aatctgttgt tgctgcaaca ctggaatgtg
      241 ttgttaatag gtatgacaaa gcagtaatag cataccagca ttttttgtat ttccacttca
      301 aacagcaaat ccgactgaat ttacctaata cttcaataat ccaattataa cactttacta
      361 gcagaaatca tcagtgcata agcctcagag tctgttaaat taggactgtg tagagctgct
      421 cacccaggat gcatttcaaa ttccaagttc ctccaagagc aggctcagct tacgccatca
      481 cgtgcctgtg agaagtgagc cgacaaccac cacgtccaac acaggggtag caagctaagg
      541 agaaatccac gttaagcaag atcataataa taagtgcagg gcaccaagca gcatggtaaa
      601 gctcacagct ttcaaatcac actgcaatac aaccaatttc ttcgtctgcg actcggctga
      661 aatggtacat tttggcatca accttggaaa cttgttgata aattgatgaa agtccattta
      721 tactaaatac tgcgtgt
//
LOCUS       KCKM01001734             949 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27340apa ultra-conserved element locus
            uce-7785, sequence.
ACCESSION   KCKM01001734
VERSION     KCKM01001734.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 949)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 949)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..949
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27340apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>949
                     /note="ultra-conserved element locus uce-7785"
BASE COUNT          291 a          193 c          145 g          320 t
ORIGIN      
        1 aaaataatca aagaataaat aaactatcac aataaatatg ttttacaata ttctgtaaaa
       61 tagtctttaa tgttcctgaa tttaaggttc tttcatttca ctagttcttt cacgttttgc
      121 atggtactgt agctgaaaga gattcttttg ttaatgtaac ctcaatgctg aagtaaacca
      181 tgccacaaag ccctcagttt tactgtagct caggcaacaa acccagaaca cactagcact
      241 gatttaccat ggttctaatc agcatttcgc acatggaaaa ctcaccatgt gtttcagaac
      301 cctttgacac tcatctcttt ctaatacaag tgcctgtttc tccctctgct ggtttcagaa
      361 taaacgcctt gtcaaaaaaa gaattagatt ttgacagctt ttttcctatg gttaattgag
      421 gtgatagata cacttgacat ttatctcagc acagaaaaga agattaagac atatttttct
      481 acatgcattc tctgtattag aggaggtcac tttccagggt ctttttaata tgcctgtgca
      541 attaatagtg gtgataattc cactccatat cacagcgtct ttaaagttct ctttcaaatt
      601 gacagataaa attctctctt ctgtacatag gacttgaatt agactaatct ttttcaagtt
      661 tgccctccag gccttccccc tctcagtcct ggaaattaat actgtctgaa aaataaaaag
      721 gatatcgtgc taactcactt agttcaaaga aaatgaaaaa gaaagagtca catttcagat
      781 tcctttaatt attcccacta aatttttgag ggcgtccccc taaattgcta cttttacagt
      841 aatgcgattt gaatgttcca cttgttaagt ctccaatcat attgagcagc gatttctgtt
      901 ccttgttgta atgcagagtg gccctcctga ttttcacaga agtaatcag
//
LOCUS       KCKM01001735             971 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27355apa ultra-conserved element locus
            uce-2270, sequence.
ACCESSION   KCKM01001735
VERSION     KCKM01001735.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 971)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 971)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..971
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27355apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>971
                     /note="ultra-conserved element locus uce-2270"
BASE COUNT          285 a          240 c          238 g          208 t
ORIGIN      
        1 aatgacccaa gcctgctcta gagctcccag aagccaatct gacctacaga cagtcccaag
       61 ggccaactgc aatccccacc ttacctaaga ggagctaagg atccaactct tgagtttcat
      121 gtaaagagaa gtctcagcac agcattgttg gcaggaaaag gcagagctct tttccctgga
      181 aggcttcatc ggagcaagtc acttaaccta tctgtccctt tctctcagcc tagaaacatg
      241 ggaagtagaa ggagctgctc ccttgttcac aagctatcag ccgatttttg ggaaagcagc
      301 ttctagtact gaagctgttc tcatgggaag aagagataca aatggcagca gtgaaataat
      361 acattaaaat taaagctaac ttaaaagaaa atacttacat ggcacagaca ggcatgtaca
      421 tgggacacac acactgtgca tttacctaat gatccatgag aagctgatgt ccccaggaac
      481 gtgttttctg attggcttaa gtgtccctgg ggctgatgga ggaaatgcga tgagaggctg
      541 accggtggag aaggagaggc agagtgaaag gaggcagagc ttccaaggga gccggggata
      601 tttacaggag cagaactttg cagcaaactc ccacctggac aaagaacaca cagagaggat
      661 ggctatgtgt gaccatgagg catgggccag agcacagcgc aggagttcag agcagaaggc
      721 gttagcttcc ctctctcctc tctaagcccc tcgggactcc ctctggttct catcacattt
      781 cattcccctc tcagccttta agaggagcac cgaagccgcc atcccatgaa ccacacaggt
      841 gaagaccctc cggagttcag tgaacagccc tttcatcggc caaagcaaca agaggttttc
      901 tgagcagagt cccaccccta tcggtctaga gaagatgact ctgacagctg gtgaaatact
      961 ttgtaatgaa a
//
LOCUS       KCKM01001736             282 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27371apa ultra-conserved element locus
            uce-1782, sequence.
ACCESSION   KCKM01001736
VERSION     KCKM01001736.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 282)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 282)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27371apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>282
                     /note="ultra-conserved element locus uce-1782"
BASE COUNT           95 a           58 c           50 g           79 t
ORIGIN      
        1 aaacatagta aaatacttcc aaacttggct catggcatca ttgtacttct agtgaaaatt
       61 atctgaagcc ttgtcaatat gccacttcct cctcccccat cttttaacag aagcagcctc
      121 cagtgaaata atccaagctg tgttcaagaa gttggcaagt gggtccaatt aaatgtggtt
      181 ttagtgtatt ctggcatttg catatctagt ttgccaagaa gtaatgtttt agggaaaaaa
      241 aaaaaaaaga aaaacccaaa aaatccctgc gtcggtccag ac
//
LOCUS       KCKM01001737             808 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27387apa ultra-conserved element locus
            uce-6485, sequence.
ACCESSION   KCKM01001737
VERSION     KCKM01001737.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 808)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 808)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..808
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27387apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>808
                     /note="ultra-conserved element locus uce-6485"
BASE COUNT          245 a          156 c          117 g          290 t
ORIGIN      
        1 aagaaggcta tcaagaagta tattcttgtg attactgaaa ctgagacttc tttttaagtg
       61 aattacgatt gactggataa aagatacaga aagattcccc ccaccaccat atgtaaaact
      121 gcactgtttt tttatcaagt agctcctgtt gagcccatct agttgatgaa cattcttatc
      181 aactagcaaa tatagatgac ttatggggat aatatttcaa tatataatga cattgctgta
      241 tcttggattc ttttaagatc tgggttatta aatattaaat atcaaagctg taaattattg
      301 tagcagcttt atacaactaa attaaattca aacaaaacct aatttcctta atcattgact
      361 gtaatcctcc aggaacatat gctattaact cagctacaaa tggcacagaa actgtatgac
      421 ttcagttaag ttattttata tcaaattcta atccagggca gagtcctcag taaatctcct
      481 gcagggattt taatgcctct gcaatcatat tggctcttta ctggagagct aatcttttta
      541 tactctgttt tttcactcct ttatccattt ccttcacacc cttactgagc tatagctagt
      601 accttctatc acatatcatg tttagaaaga tttggctttc ccctcttcca tttgatcggc
      661 aagaatcagg ctttcactta tgccagaatt tttgtttctc atgtaaaact gaatcattcc
      721 cattcatttc aacatgtatg ttaattgctg cttgttgtga tctctctata aggctgtcat
      781 aattattcac agtttgcagt caagcatt
//
LOCUS       KCKM01001738             709 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27403apa ultra-conserved element locus
            uce-7682, sequence.
ACCESSION   KCKM01001738
VERSION     KCKM01001738.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 709)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 709)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27403apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>709
                     /note="ultra-conserved element locus uce-7682"
BASE COUNT          234 a          108 c          134 g          233 t
ORIGIN      
        1 cacgcagcta ttaacaatgt tgtagttcac aaactttttc cagtgatggg taacttttac
       61 aattaatttg agttaaataa ttaagcctgg acaatcaaga gcatttttga accgccatta
      121 aagacataaa aatacctttt cagcagtgtt ttaacttgtg ctaaacagca gtcttaggaa
      181 gaatgctggt ttctttctgc tgtgggccga tttgtcaaac tgctattaag aattttcagt
      241 tataaaaaaa aaatggagtg aacctttatt tttttcctct aatttattac gcttgattac
      301 gcagctggaa tgggaaggta gctgctgttt gtagttaaat aactcctcac aatttcttaa
      361 agaaatgatc ttcaaagctt taatgggtca gtggctcaag tacaaaggaa agattgattt
      421 tcatactccc actctttgtt cccaaagttt aaaacagaca cgttctggta aattagtttg
      481 tctatgttat taatggaaga acttattaaa cttccataaa tgcatggtgg tatcttactt
      541 aaaacacaga atgcatttgc tttgaaaaaa tacatgttta aaagtaaaca ggggtgtaat
      601 atttttattt gatttcagaa atgcctcaaa aggcagcaag caggagaact gggggtttgc
      661 aaaatgtatt aggtatgcat aatgatgaat ggcacaaaga gcgtaggct
//
LOCUS       KCKM01001739             626 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27419apa ultra-conserved element locus
            uce-3354, sequence.
ACCESSION   KCKM01001739
VERSION     KCKM01001739.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 626)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 626)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..626
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27419apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>626
                     /note="ultra-conserved element locus uce-3354"
BASE COUNT          248 a          112 c          126 g          140 t
ORIGIN      
        1 aaaaaaaaaa aaaaaaaaaa aaaaattgcc aacaacatga acacacgctc acaataaccg
       61 atgagtgaag ctcactgaaa agcagtaagt ggtgctggac aagcagacat ttctcgtttg
      121 atttaaagag agagaagaaa gcgaaagcaa attaaagaga aagaaactat tttggttacc
      181 tttctcacat ttctttttgg aagctgacga aggaggagga atcataggta atttcatcaa
      241 ctcagcacga tttgattcat tcagtaggta gtgggactta taggcatatg aactgaacag
      301 ggggtctgaa tgatcctgca ctaccaaccc tatacgaaac aaacagaaag agatgagttg
      361 caatgaaact acccatgatt ccataaagga gaaaataaaa taaatcaaat gaacacctct
      421 aatgcacata tgtgtgaatg aaaaaaagat gaagaaaaag tctggcagaa agtttcttcc
      481 ctaagaaaga ggttaagact gagttcaggg aaaaacctca gatgaatgag ctgcttccaa
      541 gtggaatttc catcctgcct ttacccttca cttgtgcgtt tacagaaaag cacaagaaaa
      601 gcaaccgatt tgaaacctgc gtgccc
//
LOCUS       KCKM01001740             776 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27435apa ultra-conserved element locus
            uce-6254, sequence.
ACCESSION   KCKM01001740
VERSION     KCKM01001740.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 776)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 776)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..776
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27435apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>776
                     /note="ultra-conserved element locus uce-6254"
BASE COUNT          228 a          156 c          145 g          247 t
ORIGIN      
        1 aaaatacact caagcttggc agattaattc agaattcccc catggatttt tcccaaattt
       61 ctttccatgt tatgtgaaga caatgacatt gctatggact tccatttcac atgttctgat
      121 gataaaaaga tgtgggactt aatccacaga gaatataaaa gtagtttttt ttcagaatca
      181 aaagaagatg tcaattctct actggaaaag aaacaattaa aactagataa tggttatgaa
      241 cagctctgac ctgctgagag cctgaaggct ttgcttcact caggactcca cttcttctga
      301 ctgcaggtca ggcctacgca aacaaagcct taacagaaat gttacggagg aaataatagc
      361 catttccaat gataatacac aattttagca cctacgcttg gctgatttag gtggtcggct
      421 aacatgtcaa acagcctgcc ttagttaggt gagcctttaa tgggtaactg gcagactctg
      481 gcagtcttat ttctgtttta gatttggttt gtcattggat atccattacc tgccattcat
      541 ctttgatctc tttggacagg cctgatcaaa agatgtcatt tgacctactc cacttggcag
      601 aaacttgtat gactctcata aagggggcac cccagctata aataaaatga cattattatt
      661 tttctgtcct atcatgtaga agagacaatt atgataatgc agtgtctgtc acttggagcc
      721 cagcaaattg ctagctctca cgcaactgtt tagctttctt atttgttttt tgtctg
//
LOCUS       KCKM01001741             548 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27451apa ultra-conserved element locus
            uce-2856, sequence.
ACCESSION   KCKM01001741
VERSION     KCKM01001741.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 548)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 548)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..548
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27451apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>548
                     /note="ultra-conserved element locus uce-2856"
BASE COUNT          174 a          102 c           94 g          178 t
ORIGIN      
        1 gactacataa ctattcattt acacttaatg agtttattcc accaggtaca ggacaaattc
       61 taaacaaata atgccactga aacatacaca tcaataaatt tgagcactaa actgattctg
      121 ggtaacaaag gtaatgatta agagagagga agaaaagctg cctccaatta atgaaaatgc
      181 cctttgtatt ttctaatagc tcaaacatta atttgaaaat ggctttctct gcaataattt
      241 acagacaagt acttcataat ggagaaacaa ttcaaattta tgtgcacttg gatggtgatg
      301 atttgattaa cttattaaat tcttgttgat tctacagtcc agatgaagtg taccattctt
      361 catgggtttc ataccttgca gttttaagtt ctcacattat cagacttcag gcttcagttg
      421 ctactgaagg tcttttctct gggacgtcct ctggtgcaga gtggacagaa ccaagatccc
      481 agggattgat ttcatttgtc tctttacatt aatttcgaag ataccttctc ttccaccttg
      541 gaggagca
//
LOCUS       KCKM01001742             790 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27465apa ultra-conserved element locus
            uce-1614, sequence.
ACCESSION   KCKM01001742
VERSION     KCKM01001742.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 790)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 790)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..790
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27465apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>790
                     /note="ultra-conserved element locus uce-1614"
BASE COUNT          257 a          157 c          119 g          257 t
ORIGIN      
        1 tttttttttt ttgaatcata agtaaatgtt ccctagggca aagaaaacta cagaatgcct
       61 cctggtactg aaccttctgt gaatcaagct tttagatact tgcaacgctc tggcatcaag
      121 acgttcatac aactgtgaat tatttattca ccaatctttg tgcaacttcc aaaatgccaa
      181 tggagaccaa gacaatttca gctatttgat gttacatctt ctcaagtggc taaagaggct
      241 ataaagcacc ccattgctta agcctgccat ctcagttcca ttagcagtaa agacctctct
      301 attcaaactg ctaagtaaat cctctgagag cccggggact gtttcatgct tgaaagcaac
      361 tgttaagaat ttgacaacaa ccaaactgtt cctatttaat ccttctccca aggtaaaaag
      421 aattataggt aaacatatgc cttcattatt tgctttgctg catttcaata ctcaatccca
      481 cacaaaattg ccagccaagg atttaatgca atctcttctg tatttcagag ctattgcctt
      541 tacagaatgg aaaaatctta ataagggcta tagagttggt tagcaaacaa ctctattttc
      601 tataatgcac gctagagatt ttccaaaggt aactttaata atacaaagag ttgtggtttt
      661 tttcatgtta ggattttcag gtaagccaaa atagttgtta atccattcaa tctgccagta
      721 agtatttttc tttctaatta aaagaaacaa aattaatcta ttacagagta taacaacact
      781 acttttacta
//
LOCUS       KCKM01001743            1154 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27479apa ultra-conserved element locus
            uce-3882, sequence.
ACCESSION   KCKM01001743
VERSION     KCKM01001743.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1154)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1154)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1154
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27479apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1154
                     /note="ultra-conserved element locus uce-3882"
BASE COUNT          332 a          231 c          286 g          305 t
ORIGIN      
        1 cccaaagctg tattcgtaca tttaattcca agagtgatgg aggtacgtgg tgcaggacat
       61 acaagtagaa gcctcacagt caggattgat ccgtcctgtc ttgagaaggg gtgaaaggac
      121 ttcatagaga ccttattgtg aaggccagag gtatgcagga gccgaaggca tgatgacttc
      181 aggatatgag gcgtttcttt ttgtcattta aaatgctgtg tgtctctgtc aagaggaaat
      241 attacactag ggtttaaacc agaaaaggtc ataggttatg tgttttcagt gagctgtaac
      301 tgatggtctg atctgcttag aggtaggatt aacctccctc tctctcagaa aggacttgca
      361 gagaattgtt tgcttgggtt tctaatctta ttttacccca aatgccatgt gcccttattg
      421 gtggcagagg agattcttgt ggtagtggaa tcagtgaaaa gctggtagat cacacaagaa
      481 gcttctgaat gaaggcagaa ttgaaactgg gaaataaaga aaacagcagg caggtcaccc
      541 tctcaggaaa acaacattca ttctcagtca tgcacatcct aacacttttg acggcaattt
      601 atcatggaag actgggttca ccgcaagggc taacacatgt cataggttaa atcagaaaag
      661 gcaatactga aaggaaactt caaagtcctt aatacaccga gttaaatacg ttggaaaaag
      721 cttacggtgt ttgttataaa gataggagta aacagcacgc tggaggaatt ttggcaaaat
      781 gtcgcgcgat tgttttgcct gtttaaggca ccatttgtgt cgttgctggc tctggagagc
      841 acacccgtaa cttgcagaaa gttgagcagg ttgagcttat gggcctcctc cagttctaac
      901 tgctgtggat ccacaggtag aactgggtat atcgactcat aagttacctt tccccgcagg
      961 agacatgatc ctgctcagtc ctttatgcct ttccttcaca ccgaaatctg tgcaagcagc
     1021 aaggcccttg caccctcccg aaccctcggc ggggtggtgt gtgcattcag cttagaaaat
     1081 gctttgaagc aagggaaaga gatctcaccc tgacagaaat ttcaaggtga atgcagtagc
     1141 aaactgaaag ctgg
//
LOCUS       KCKM01001744             640 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27495apa ultra-conserved element locus
            uce-2457, sequence.
ACCESSION   KCKM01001744
VERSION     KCKM01001744.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 640)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 640)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..640
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27495apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>640
                     /note="ultra-conserved element locus uce-2457"
BASE COUNT          218 a          132 c          114 g          176 t
ORIGIN      
        1 atccaagcaa taccaaaaag ttcattaaat gataaaccat ggaagtggat tttccactac
       61 tctgtaaaac cttaggaggc cacgagttaa ctgaagcaag cagaacaaac aaacaaaaaa
      121 aatgaagcaa ggaaggtacc atagctactt tcttgaaaag aaaaccaatc ttttcattcc
      181 tgccatttgt tagaattctt cctccaggca agctggacag ctgcactagt aggtttttta
      241 gtcatgggtt gtaagcccca cctggctaga tttgtttagc agacagctgg cagaatgaaa
      301 taaaaagaac agggacatac aaactgcttc caaaacaaaa agctgaaaga atactttttg
      361 gatgctttag ctatcgccga gtgtattgag tgtatgttta ggggagattc tacccttaat
      421 ttttattgtc cctcatctct ctgtacccca aaagtattaa aaagctgaag tgagactgca
      481 ggctgtattg agcagatcaa aaagaaaggg aaaagcccca tctcagccca ttattttgta
      541 catgtgcaca catatataaa cgacacacac agtctccctc aattatggtt tacaattccc
      601 caagactcac attggtttta aattaacttc tcttcttatt
//
LOCUS       KCKM01001745             949 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27510apa ultra-conserved element locus
            uce-6196, sequence.
ACCESSION   KCKM01001745
VERSION     KCKM01001745.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 949)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 949)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..949
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27510apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>949
                     /note="ultra-conserved element locus uce-6196"
BASE COUNT          326 a          172 c          147 g          304 t
ORIGIN      
        1 gttttacagt actaatgctt gttattgctt ctcacaaaat gttaccaagc ttacaataat
       61 ctttacactt tcagcaaaaa tgtgaacagt atatttgaat atattaaaaa gaattaaaaa
      121 aacatttcac aaaaaacatt tgttgccata cgaaagtctt tcagcaataa atgcccacac
      181 cagtatttaa acattgttaa aagtataatg atttgtacta ataaattatg caacaagaga
      241 ggtaaacaaa ataaaattac agtatagctc tccatgttcc tccactgagc atccgcagct
      301 tttggaagct ccattttaga tgactaatta agaaaccgat attttcagag caacaaaaat
      361 aaaagctttt atttgttcat ttgaatataa aacaggcgtt atcacagatg tacaaagcgt
      421 actggtggtt taacatacaa gaaggttgct gtcctttgca cataaaaatt tttgtttgaa
      481 actgtgattg gctgagttac atgaatttct ctaaccagtc accacactct atgaaataac
      541 gctgctaaca ttcaactgat aaaagggaca gtcttccctt gggtaaagtg tcaagcagga
      601 ttaaatatat ataataaaca agcaccatga ggaatctgct cctgtttgat tagtttcgtg
      661 tttaaatgtt cattgtgtac cctctctttt tgtgcatgtg catcaagttg attacatggt
      721 tttgtctgac tccaaaagca caaggtcaca agacaaacat tttatacatt ctcatgaatg
      781 gtttatctac agtacagttt ctaatacaga acaatccttc tttattgctc agtctgatgg
      841 tgcttaaatg tttccttcct tttgcttgca caacaaaacc agaaactcag tgtatcattt
      901 ctcttaactc aggatttaac aaccacagat gacaggttgc agaagagag
//
LOCUS       KCKM01001746             840 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27525apa ultra-conserved element locus
            uce-106, sequence.
ACCESSION   KCKM01001746
VERSION     KCKM01001746.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 840)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 840)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..840
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27525apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>840
                     /note="ultra-conserved element locus uce-106"
BASE COUNT          255 a          196 c          201 g          188 t
ORIGIN      
        1 gcgtggctct gaagacttca tttactacac cagcagtatc tgatgagaaa gccctcagaa
       61 ctgtgacttt actaacaagc ttcttcacgt ttccaagtcc atgcaaacac tgagaagcag
      121 atttacagac acacacagag cacaaaatgg aaattcctag ccctctatgc aaccccacac
      181 cgccactggc agaccttgtg tgaaatgagc actgtctctt taagctcgag gacctgctac
      241 acttaagcag tctgcagcca aggaaaagtt ctgaagttaa actctcagga gcaaacattt
      301 tctacttgtg aagtaaactc tgttgaaaga cagcagacta cggtcccacc agtaaaaaca
      361 ggaaagtttt cagccagtga cagctctgcc tacagacgaa aaaaaagtgt cacagactca
      421 ctttattaaa ccatatgctc attgccctgt gaagaaagca gggtcactaa ttagttcatt
      481 ctgtgaaaga agcccctcct gatcccgttg acttttgtcc ccccggttag ctcaagctat
      541 ttctgtcatg caacttgaaa atcactggag ggaagaagat cgccataaca accgctgaaa
      601 tgatcttgtg gaatgtgtct agtggcactg gaataacctg aatatgtgct ccagatgtgt
      661 cggctgtcac ggaaaaagta aacacatctg atggacaacg tatgactgga tggcctcacg
      721 gttgactcca gagagttggg atggagggga gggaaaggaa aggaagcagg gaaatggagt
      781 caagggccag gcaagagtca ccctgtggac ctgtgcagcc tggcaggctg agaggggcga
//
LOCUS       KCKM01001747             913 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27541apa ultra-conserved element locus
            uce-3835, sequence.
ACCESSION   KCKM01001747
VERSION     KCKM01001747.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 913)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 913)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..913
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27541apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>913
                     /note="ultra-conserved element locus uce-3835"
BASE COUNT          321 a          175 c          157 g          260 t
ORIGIN      
        1 actaaaagat aggatgaaaa ggaagggaag gaataagaaa aagcccacca aacctaaaga
       61 gttcctgcct ctaaagaatg tggtacatgt atttatttcc aaaataaaaa agtcagaagc
      121 catcaattct ccacacctct tcatttttgc atatttaacc accaaggcat gtactacagt
      181 cgtctcgact gcaaggggct tgctctccca aaaacgtcac gccttccaca tgctcttgat
      241 tgcagtggga accgtgggat ttcaccgtct cacagaagtg agcagcatgt gtttcaatat
      301 acttcgtgac ataataaaat attctattga aattacgaga tctaaaaaac aattacttta
      361 ttgcttctta caactttttc actgtaaaat tcaactccaa ggtagtaatt ggcagggaca
      421 aaattatgta gcaattaggg catgacagca aaagcaaaca agaactgaaa atgggttcga
      481 cacttctggt aacaagcagg taattatcac agcagcttga aaggggcata atcaaccaaa
      541 ctgacatcat ccctcccaca taataaaatg tgaaatccct ttacgtgcag catagctctt
      601 acacacagct ggtaaaagct gctagtctag tctcgatgtc tgtgtctgca aagcagctga
      661 ggttacattt aggacagttc aacagtggat aattttattt atttattcag aatgataata
      721 ataactctta tatggttttt tcaatccatt ctggactaca gagattacgt ctagaaaatg
      781 gtattttaaa aaaatgccct ctcttctgtg agtataagtt ttcagttcct ataatacaga
      841 aaaaatttct gcctaaaagg cagttactaa taacgactgc aagataaaat aggtttaata
      901 ttttaatata aaa
//
LOCUS       KCKM01001748            1008 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27557apa ultra-conserved element locus
            uce-5405, sequence.
ACCESSION   KCKM01001748
VERSION     KCKM01001748.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1008)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1008)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1008
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27557apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1008
                     /note="ultra-conserved element locus uce-5405"
BASE COUNT          299 a          163 c          212 g          334 t
ORIGIN      
        1 atgagggata gagaaagaag agggatcaat ttagggaaaa gcgtaagata catttgtaaa
       61 gataaatctt tcagaatgaa tttcaaaata tgtatgagta ttgctagaaa attttcaatg
      121 ggcaacgtgt atcgcagttc atatatgtta cttaaacttt tctgacagca gtaggagcac
      181 ctccaagttc aggctttcct ttgaattcag tgtgacatac agagtgaaac ttgatacagg
      241 atcgtctgag cggtgttatc ttctctttag ccctctaaag caaaacaact tatgtttacc
      301 tttggaatgt ttgtctttcc cattagatca ctcgagtgga tggaaagaag ttgctaccgt
      361 acagggagca gcttgggaag atactgcagc gaaccctaca tttaacctgt aagcagggtt
      421 acattctgtc ttgtaaccta ctgcaccatc ttcttcgttc tgctacactt atctacccca
      481 cagagtactg cagtgtgcca ggtggctttg acaagcctct ttctgaatac tttcctatca
      541 aggcaaggat tttcatttat ttaggattag aggatttgac tttctttttt aaaagaaaac
      601 gtacactatg ttacttgtct ttatttggag atttctgaaa gcggcaatgg aaagtgtaat
      661 tgaaagatgc tttgggcttt gaaatgtata gcaaattaga agttaattaa aattatattt
      721 atagcaaaac atgaaatctg acttgttttg agtggtttta tagcatggca ttagtgtttt
      781 atgatgtgtg ttttacagtg attgcatgac ttcagtaaga tagtacaaac caggagcgcc
      841 tgctcgtgtt tattaatctt ttaatgtgtg ttgtatttaa tggagaccca gctatcgtga
      901 agtacagtgg tacaaacagt taagtttgga gttcagcaga agaattctgc tatttgcttt
      961 aacttaaata tccggtcata cgaagcattg ttgcactgag gcaaactt
//
LOCUS       KCKM01001749             891 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27571apa ultra-conserved element locus
            uce-3188, sequence.
ACCESSION   KCKM01001749
VERSION     KCKM01001749.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 891)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 891)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..891
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27571apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>891
                     /note="ultra-conserved element locus uce-3188"
BASE COUNT          272 a          185 c          173 g          261 t
ORIGIN      
        1 tagggttatg catcaaaagt gacaaataaa actgcaccat ggcactctct ccaacttttt
       61 tccccttttc gcagaggcaa caattgtctc cattagcaag gtcagtggtt tggagaaacc
      121 tggaaaatag cagctaccag aaacccacta gaataatatc tccagcaggt gatagattag
      181 ttggaacaaa ttggaaccat tgcacttcag caatcctggt ttctttcaag ctgttttaaa
      241 aatgtcgtca ttttaataca caatatcagc cctgcggaac agtccacagc aggttaattt
      301 gaatcatatg atgtatcact gccctcagct gacatgagct ccgttccatg tgtgaagcca
      361 taataaatcc attcccaacc gaggcaaatt ccctgtgaga aggtgaacta atccaggcct
      421 cacactggca tgttagccct ccgtaattga aagcagggcc acctgttccc agcacagtta
      481 gcctatagag agaaaattag cattagatca gatacttaat atattgaaaa atcattcata
      541 ctacttgcaa gttcagctgt gggctgctta gcatgacatc atatataaac ctaggaatgt
      601 gcccacttga tcccagttta acagttttgt taaccatggt gtttgttaac tttgaaatga
      661 gaattttttg atttaatgag agctgacacg tgagaagggg aactagccag ggtgcagact
      721 tttctaatta actctgggtc atttgcaaaa cttttgagct ttttagcagg gtttttttcc
      781 cctttgctct tttacaaaca agtttttaaa gcactgacac tgtagccatg aaatgatatt
      841 tatttgatta aaagggcaaa gagaaatatt ccaaacaggt gtactggcct g
//
LOCUS       KCKM01001750            1123 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27586apa ultra-conserved element locus
            uce-1805, sequence.
ACCESSION   KCKM01001750
VERSION     KCKM01001750.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1123)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1123)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1123
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27586apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1123
                     /note="ultra-conserved element locus uce-1805"
BASE COUNT          339 a          230 c          217 g          337 t
ORIGIN      
        1 tttgattcct acttaaaatg aacagctgct gaccctggta tcagatgttc cagatattgg
       61 cgctggtaaa tagaaccttt catttctcct ggcgtcttaa tattatgtcg gaaaggaagt
      121 gcttagttaa acgatccata cctctatgct ttcacttgct cctttagctg aacagtttgc
      181 acagagtgca aatgttagat gctcagctcg acttgcaacc ttctctgaag tcagaccacc
      241 acattatggt gtaactggag ctttgatatt ttcctcatag gctttcccaa aatgcatgta
      301 ttacagttat tcagtccaga ggctgcacat ctccctgtgc tgtctctttc ctccagcagt
      361 gcttgaaaat gtgctattat tgaaagagtt aaaaaaatcc ccttggaaaa gctaattatt
      421 gcatgcagat acttctttgt gtgatcaagg aggggacaat ttaataggct ctgtaataca
      481 accaagaaca aaattgcttt aaaggaagtc tcttgttgag tgacaactct gttgcctgag
      541 ccaattaggt cccaataaag agtgttgaat tggctcctgc tttctcatta attatgttct
      601 gtcacagaca tggggcttga tttagcaatt ttgtattaca ttaagatact gaaaggaatg
      661 gaacaaatgg ctcactctga taataggcat tctatacacg gtgtgacatt tactatccag
      721 ctgtccataa ggcagcctag cacttcagtt caggggttta tttgtcattg cttcaaaggg
      781 acactcagct tttcacaaaa aagaaacaga gaggctaata gataggacaa aatgtactgc
      841 tgatatgctt tattagagat aggatgctag ggttttgcta acaagctcat ccgttgggac
      901 taagccgagt ttgctgtcaa tcatcctgca cacaaaagca cactagttaa caaggagaaa
      961 tgaattacag acacttattc ctgcctgtgg gatcacaaat acaccaatct gtgaaagagg
     1021 cacaaactca gaagacaaac tacatatttg tcaataacct cctagaaaga accctagtaa
     1081 ttctttgaag acctttgatt tagcttccct ctaaaataca cgt
//
LOCUS       KCKM01001751             530 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27601apa ultra-conserved element locus
            uce-6829, sequence.
ACCESSION   KCKM01001751
VERSION     KCKM01001751.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 530)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 530)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27601apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>530
                     /note="ultra-conserved element locus uce-6829"
BASE COUNT          155 a          107 c           84 g          184 t
ORIGIN      
        1 ttcaaattct gtaacttccc agaaagacac gctactatca tctgtgtcat tttacttaag
       61 tggcttcctt atgatactaa ggcatttaca gttggttatc acagtctgag tttttctgta
      121 acaatcactg aaataactca ggcattcaat cctggcaagc cacagactat tccatgcttt
      181 gaaattcata gatttagcag catagtgtca gatcattttt cataaccctt gtttccttgt
      241 cagcgtgtca tagccagtaa agggctgcta gattagtaca aatatataaa tcttttctca
      301 gcttcaccgc actgctgttt aatactactt tactacacta ctgtgcttac tagcttaaaa
      361 taccttctgt ttggagaaac gcatatttat tattattatt ggggagtttt tgtgcaattt
      421 ccctgagcag aggctgacag cagcatagca ctttgtcatt tatcattgta cacaagatct
      481 gtcaacttgg gaaacaattt caataaaaaa attctgcatg aaattacttt
//
LOCUS       KCKM01001752             840 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27616apa ultra-conserved element locus
            uce-7715, sequence.
ACCESSION   KCKM01001752
VERSION     KCKM01001752.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 840)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 840)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..840
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27616apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>840
                     /note="ultra-conserved element locus uce-7715"
BASE COUNT          302 a          156 c          125 g          257 t
ORIGIN      
        1 tcacattatt tattcatcat tgagtttagg ggaagtacag ccagcatttt ttctgtttgc
       61 aaactctact aataacttta ccttaaaaaa atctcagaac attaactgac agtttagcaa
      121 aacaaaatta aaaatcatta agatcaaact tcaaaataaa ctttaaaata aacagaaagg
      181 ttttttttgt gatgcactct tctatttttt atatttgctc tcattcacta gttactcata
      241 gcaaactgct gaaattcact tctatctttt tcttgtatga actacaaaaa tgaagtacaa
      301 atatatactg taccttgttt tacctgtaag gaacacacac ctgacaaaag gcaatcttca
      361 catccagagt aggttcacca caataataca agaaatggcg gctcataaat acctgcaatt
      421 aaagaaaagt aaacaaagaa atcttgtatg tctgctgatg tgcaagtaca atgcagccct
      481 atttacattt gaataatcaa accagtctga gttgctaccc agcctgtgaa caccagttat
      541 gactctgaac tgccaatagg ttttaattct ttctggtgct cgtcaaggtt atggcctcaa
      601 atatgacttg gttacatctg caaaaattta cagcaactga tgtcattacc tcaaagctta
      661 tcataccact tgtatactcc tatatcatca aaagtaaaaa tcaagtcaat aatgttctaa
      721 gcaatgtggg agtggaagac agttatagaa aacaagtctg aagttgacaa ttattaggaa
      781 agctatagca aagggaagac taattacatc agtgtataaa ttcggggtgc aaccacttca
//
LOCUS       KCKM01001753             981 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27630apa ultra-conserved element locus
            uce-7699, sequence.
ACCESSION   KCKM01001753
VERSION     KCKM01001753.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 981)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 981)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..981
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27630apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>981
                     /note="ultra-conserved element locus uce-7699"
BASE COUNT          228 a          231 c          247 g          275 t
ORIGIN      
        1 gagggtgaga acaaagcact ctgcagcttc aggactcttg cttagaaact gaagagaaaa
       61 cagactggag tatttatctg tacttctaca ctacattctt gctctaccag aaagtaccgt
      121 tcttcctttt cttttccttg ccctgcctgg ttttaaaagc gtggctgtgt cagtcggggc
      181 agtagcagag acacctgcta ggaaggacag ctctggactc cttcagacat ctgctgctgc
      241 cttgcagatg aggagaaaaa tagacccaca tctgcaaccc ttgccttagc actgtgtgct
      301 taatctgaat tttatggctg tgatagcgga ttacggtgcc gctgtcacaa gcccttgcag
      361 ccccagtcac ggtggacact gtgcatttca atgcctcctc cactaatctt tcccccactg
      421 ctcccgttcc ctggctgcta atttcacgca ggcacttaaa catgatggat aattgtgttc
      481 tgcttatcaa tgtttaattt aagggctgtt ccatctgacc tggatgccct ctgcaagagc
      541 tatgcctcat tattgatttc atggtcacac ctgtgacatt acctgctttg taggaagtag
      601 actttgacat tcctgtgagg ctttggcagc cagagctaat tgtcagaaga ataatcgagt
      661 cagcaaaatc attacaggtg atctgtgtgt taccactgtt ttatctgcct ctaattaggt
      721 gcaggagaag taactcatcg tggtaagcat gccgcactgg gtttgatgcc cacaaataga
      781 gctagatgag catgggaggg aagttattca ttagcagcgg tgttttggcg tgtcggggtc
      841 ctgtgccagc agagtctcct ttcctggcgt gacagggcga gacgcgatgc tgatgtctct
      901 gcaggatctg ggatcaggac tcagtggtgg gacgcaccac tggtgggatg tgtcaggagg
      961 acacgttagt gatacacact g
//
LOCUS       KCKM01001754            1116 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27645apa ultra-conserved element locus
            uce-6414, sequence.
ACCESSION   KCKM01001754
VERSION     KCKM01001754.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1116)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1116)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1116
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27645apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1116
                     /note="ultra-conserved element locus uce-6414"
BASE COUNT          290 a          222 c          235 g          369 t
ORIGIN      
        1 ttgttgcact gacagcagga atcaactgag cctgtatgag aggcagaggg agaggctgca
       61 taatgtgggt ggggggaggg gcaaagcaca tactcatttg cttgtgtagc ctatatcctc
      121 tttcaaggga tgctaccacg acagcaagca ctgatcccag ttggtagtgc atgtgttatg
      181 gcatattgcg gcatcaggta ctgctcacat cttgggatgt gagataattt atccatattt
      241 gtatcagtcc tgtacaattc ctgcaacagc ttatggcttc tttgaaatag gaacacctgt
      301 gggttgccat ctttcacaca tgacaaagag cagaaaagaa gaagacaata ggaaaatgat
      361 gaccttcttg caattcatac gccaccaaag tctgtgtggc ttcctgtgac agttctgtta
      421 atcactcttt tagtctcttc ctccacctct tacaggcttc tgtcttcaat ctcctttcct
      481 tccttgctag ttcatactgt aactgacgat gggttttctt ctcgactggc ttcatttttg
      541 ctgttcttcc aggagaaaaa tctattacct gcaccgccga tacaagttca tgaataggtg
      601 agtacaattc ttttgccagt ccagtttatg ttcatttgga cctaataata aaaattatgc
      661 ttaaggtcca gctgtttatt agctgtgttt gtaggaaggg tgaagggagt gattacacgc
      721 tcgaacatct gcaaaaacag agattgcatt tttaaggcat ctgcaatgtg aaagaggcaa
      781 ttcattttat cactgttgcc tttttttagg aataaggaaa tatttttcag ttgatggagt
      841 cttttaaaga atatcttact gcaaacactg tatctctttc tcttcatgta gctcattagg
      901 gagtttcttg gggttaaaac tccccagcta gagcttctca ttccatgtac cttgcttact
      961 tgtaataatg atagcatacc ctatctattg cttcttcttt ggtgatgctt agtactttgt
     1021 tggtaggtag aaaggcaatg aaccaagttc atctccgatg taacattgag cttgagtgta
     1081 tttttcaaga atctttgaag cgctttcact cagtta
//
LOCUS       KCKM01001755             565 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27661apa ultra-conserved element locus
            uce-747, sequence.
ACCESSION   KCKM01001755
VERSION     KCKM01001755.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 565)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 565)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..565
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27661apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>565
                     /note="ultra-conserved element locus uce-747"
BASE COUNT          203 a          105 c           84 g          173 t
ORIGIN      
        1 taaatctcaa cgttcttcat ccagctccag ctgttaaaag cctatggccg ggaaacaatt
       61 aatgcagata tttgtatatg cttccacaac tgtatactgg ttttatttgt atgcattcct
      121 ttaatagtat aaacaaaatg cattttactt aataagtttt catgcagatc ttacaacaca
      181 tttttctacc acatgttgga ccatttgtgc aaaaaaaaat cccatcttta tgtttgaaat
      241 ttatgggaac acaattaaaa tgagaggggt ccaaaggtat caagataatt acatttttct
      301 aatcttacta aacaagataa attacctgca ggccctctta taaaagatga aatcttcata
      361 ataagtgaat taatcaagca gcagcttgct actgcacatg catttataac aggaatgatt
      421 caaagactta ttttatgggg aaattaatgg aaacaggctt ttcattcttc tgcaccaatt
      481 gaaaacctca gcaaccagct gcccacttgt caagaaaaca gaaagaagct ggaaacaaag
      541 ataaataaaa acaccttttt cctgg
//
LOCUS       KCKM01001756             604 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27676apa ultra-conserved element locus
            uce-2509, sequence.
ACCESSION   KCKM01001756
VERSION     KCKM01001756.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 604)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 604)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..604
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27676apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>604
                     /note="ultra-conserved element locus uce-2509"
BASE COUNT          145 a          117 c          120 g          222 t
ORIGIN      
        1 tttactgtaa aacctcttgt ccagccatgg ctggacgact acttactttt tttcttgacc
       61 cctccgacat aacattctcg taaaatattg cctgaggtgc ggttttgggt tacattagcg
      121 ttttatctgt tcagtcatat taggaggaat aaaacttgtt tctgttgtac ttgagtctta
      181 cgaaaaggtg cccgtagttt agcaacagtt tccaaaggct ttagtaccac ctgtattaca
      241 aaatggggga cccaaactcc cggaagaaac aagctctgaa cagacttcgt gctcagctta
      301 gaaagaaaaa agaatcttta gctgaccagt ttgacttcaa gatgtacatt gcctttgtgt
      361 tcaaagacaa ggtaacttgc ttttcatgtt tctctcttgc tttttgctgc ctgattgtgc
      421 cttacggttt attctcaaca gagtccattg acttttaaac tttttttgat tgttaatcac
      481 ggtgatattt actcacgttt gtcattttgg ctttttctgt tgctagtgcc tcgctaaacg
      541 attgcttggt atctttggta ttgggtaaat atttttttaa gcctgattgg gatctgagtc
      601 gtgt
//
LOCUS       KCKM01001757            1074 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27692apa ultra-conserved element locus
            uce-3638, sequence.
ACCESSION   KCKM01001757
VERSION     KCKM01001757.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1074)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1074)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1074
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27692apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1074
                     /note="ultra-conserved element locus uce-3638"
BASE COUNT          291 a          219 c          198 g          366 t
ORIGIN      
        1 tgtctttgta aaatcacagt aatgttgcga ctgaaaatat tttaagtatt tttctttcat
       61 ttatgtgatt attcctccac agagctgttt tctggtggtc tgttgtgggg ctgtggtagt
      121 aagcatgggc tatttttttt ctctttctcc atagttacgc tattggcttt tcataatggg
      181 gacccggtag ctctgtggtc atctcttctc ttcagaattg actgctctgc actctgttcc
      241 acaagtcttt gaagattttt ggcatccctt gttcataggc tgcatgtgag ggtcaagctt
      301 ttgagtcttc taatcactca gttctggcat agtcccgttg ccactaaagc ctcttttcat
      361 gcctatttaa tgcctcagaa gtgctttcaa gtggtctttg ataaatcata gtaagtgtta
      421 ttccagtcgc tcaatagcag tacctgctag agtctttttt agctcccaag gcagccgttc
      481 cctcttgcct tattttacca gtgacagtaa ttcattccac ttgagctgac tagcttattt
      541 cacatttatt tgcacattat gagcagtgtc attctactta cccttcagac agtaaatggt
      601 ttgaaaaatg caactgtaac aaatattagg catggggagg ggaatacgaa aatggaacct
      661 ttgcattcca agcccaaata aaaacataat gaataaataa tattttgaaa ttatctcaat
      721 cattgagtgt atgcaaaatc aaaggtgctg cataaacttg cattatccct ttgagaatac
      781 atttctcttt cccgccagct agtttagctt ccctagtgtg gagttaaata aaatattacc
      841 catcaggtca ggaaaataat tagtccagcg ttattgcctc cttcctaagc aatcaaactt
      901 gacccatatg tattatgcat gtttgcaccc tgcacatctg agaagtggga tgtatataaa
      961 cagatgaatt tgggctccat gtttgcatac cgagacagta ctcctactct gctctacaga
     1021 aaaggcaagt tgaaaaatta tcagagaaaa agcaaaccat ttttttggta tcct
//
LOCUS       KCKM01001758             405 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27708apa ultra-conserved element locus
            uce-1629, sequence.
ACCESSION   KCKM01001758
VERSION     KCKM01001758.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 405)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 405)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27708apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>405
                     /note="ultra-conserved element locus uce-1629"
BASE COUNT          137 a           86 c           58 g          124 t
ORIGIN      
        1 attgattaaa agaatataca tttaacataa accatacaac atcagtcatc aattcaaaca
       61 ttcagctggt ttccttacat tttctgtcag gagttttttt ttaatctgat cacatttata
      121 agataaaatc tcaccacatc tggcatatac acacactgtg ccagtggatt cactctactg
      181 atgtacatat aaaatccgca tggtatgtgc tcactggaga caaaacagcg cacacctgtc
      241 aaaaggtcat tttaatataa gatggtaaaa ccatttgtaa aacacatata aactttttcc
      301 ataaatagaa tcatatctgg acatctgttg cataaattgt gttttccaaa gcttacaata
      361 tagcagccag gtctcagcac tgctgggcac ccacgttggc cactt
//
LOCUS       KCKM01001759             715 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27724apa ultra-conserved element locus
            uce-3828, sequence.
ACCESSION   KCKM01001759
VERSION     KCKM01001759.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 715)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 715)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..715
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27724apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>715
                     /note="ultra-conserved element locus uce-3828"
BASE COUNT          253 a          150 c          150 g          162 t
ORIGIN      
        1 tggactactt aacagttaac tgagtctgtc acaccaacag cctcgaaaat atcccttgag
       61 cagaacaggt taaaggacaa atttttaagc atctcttcct ttcaactgct agaggccttg
      121 aaaagcagaa tgagtaaatt cacaataaaa tcgcttctat cctgatcaac tcatggcacc
      181 agcacatcag aaacttggga ctgggaaggg aaagaatgat gacgtgagtc ttctcagccg
      241 cagaactaaa tgagtgaacc ccaaatccct ccaggctttt taatttttta tgtttctctt
      301 gtacaaaagc gatacataat agaaaactta acttctgttc tgtttgggtg agccaggaag
      361 ccttcttgcc tcatgtaaat ggaatggcag ctaggcactt ctgaaaggag aagacgacaa
      421 ggctagtcaa aaggctgtct ggaattaaaa gtgtgcaggt tatcagcaag acaggcagag
      481 gagcaagaaa aaggacgcag ggcacagcga ggaagagccc atcaacacag agtcaacatt
      541 tcaaagcgtt acacacaagg tacggtaaag gagaaaatcg taacgtgagg atcatagatc
      601 ccattgaccg taggcatttg aacttaaacc cttattgtaa tcaactttga caaaagctga
      661 ctccacgaca aattagaaca ttcagaaagc aaaaccacac aagacagtac aaata
//
LOCUS       KCKM01001760             540 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27739apa ultra-conserved element locus
            uce-5113, sequence.
ACCESSION   KCKM01001760
VERSION     KCKM01001760.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 540)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 540)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27739apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>540
                     /note="ultra-conserved element locus uce-5113"
BASE COUNT          154 a          124 c          112 g          150 t
ORIGIN      
        1 taatttggaa acagtagcca tgtaacaaca tattgatccc tgagaagaac agtattgctt
       61 tttccttagc tttatcatcc cttacaattg ctggagcttt taaagaaagt tttcttaaat
      121 tgttagaaca cgtttatttt cttgcaaatt aattcttttt aactctttat gatagctttg
      181 aatcccataa agaaagatga attatcacat actgagccca agctgtgaaa caggaggaga
      241 caaatagaga cccccactgt gtttaacaat gtagaagaaa ttccaggctc aatagaaaaa
      301 ttttctatcc tttttctcag cccagggaag ctgtgagtct ggatttgaac agcggagggc
      361 actcgtgcta tgcaaaaacc cggcaccccc tggcaccctc gggtttgatc caggcgctaa
      421 gcctaaaatc tcacgaattt gtgaagtgag cagccacctg tggcacaggc accccgcgtc
      481 ctgctgggga cattcccagg ttcccatgtg ggtggcaaag ccctttggga tctccagcac
//
LOCUS       KCKM01001761             705 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27755apa ultra-conserved element locus
            uce-6467, sequence.
ACCESSION   KCKM01001761
VERSION     KCKM01001761.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 705)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 705)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27755apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>705
                     /note="ultra-conserved element locus uce-6467"
BASE COUNT          212 a          136 c          142 g          215 t
ORIGIN      
        1 tgagaagtgt gggaatggaa caatttataa ggcacaaaaa taacctgcag tcctttcaaa
       61 tactcagaag aaagagaata ttcagagtcc agtaaataag caggaacagt gttgctgtga
      121 cccttcccag cctcctttgg tctgagttcc ccattatgca gtaaataaat agctatctgt
      181 tatatggcca ttttttttta ataaaaacac ttcgaagtgc tttgcttttc cttaattaaa
      241 aacacatcaa gccatggata aagcattgtg gaatggcctg ttgtggcatt gccttttaca
      301 gctggcaagc aaatttctaa taaaatggtt tttgaaagga atattgcctt cattcaaatc
      361 tcctataaaa actacccatc cattaattcc aattaatgac actacagcat ttccactaac
      421 actggtagta attcttggct aatggatgat tttcaacaaa atcagaatca atgtaagttt
      481 ggacaggact cttgcagaat taatttactg cccccatgct agctgaacca gagcacagtg
      541 gttttcttaa gcatataaat cagagtggtt tgaaatggtt tctcggcgcc gtcgatgaag
      601 cctgtgctat gagtttcctg tgggctttaa agggagaatg aaacgcatcc tgctctgctg
      661 ctggatcctg tgggtctgtt gcaggaaagt tgtccttatg cgtag
//
LOCUS       KCKM01001762             828 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27769apa ultra-conserved element locus
            uce-5101, sequence.
ACCESSION   KCKM01001762
VERSION     KCKM01001762.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 828)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 828)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..828
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27769apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>828
                     /note="ultra-conserved element locus uce-5101"
BASE COUNT          276 a          150 c          154 g          248 t
ORIGIN      
        1 gctctaaaac aaacacgctt ctatctcttt aaatctgctt ccccataacc acaaacatgt
       61 atgtttttca taaagctctg gaaattgtac tggacccaag ggaaggtacc aagtggaaac
      121 cttgctatcc tgagattaga actctactag tcctgaggta caatgtgctg tttgtaacaa
      181 ttataataat acacctgtac tactattgtc agtgtggagt agccacatgg ggtctcatta
      241 gtattgtatt aggactgcat ggggaaacgg ataatagccc ataatgaaaa atgccaaatt
      301 ttctatataa taaaaatgaa cttgattaat gaaaatcact ttcagggaaa gagttacagc
      361 gttgttagaa ataaaaaatg atgtattaat ccgacactct tacagatggt ctcaacctcc
      421 tgacaactgc tattcatttg agatgctatt agcatgcata attatgctaa ttaagttgta
      481 attaagcacc aattcttcag agggcttttt ttgtctatca tttaatacaa ctcagcttca
      541 aagagtgctt aaagctttac acagtgtttc acgagaaagg ggttcccaag tttctcagta
      601 aagattcagc agctgagcta tggaacaggg cctgtaatct ttgttttggt taaagggaaa
      661 ccagtaaatt gaagcagggt ctgccaattg ttgataaaat aattaacgct ttctgctaaa
      721 atagcacagt tcatactagg acaattatga aaaggcgaaa aatggtgtaa ttatcaatgg
      781 agccaacacc agtgtcctat tatggctgct accccctaat ttgaaaaa
//
LOCUS       KCKM01001763             958 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27785apa ultra-conserved element locus
            uce-3633, sequence.
ACCESSION   KCKM01001763
VERSION     KCKM01001763.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 958)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 958)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..958
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27785apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>958
                     /note="ultra-conserved element locus uce-3633"
BASE COUNT          321 a          170 c          182 g          285 t
ORIGIN      
        1 ccattagaaa tctgatttgt cacagatttg taaatgacag taacttcttg actgggtgat
       61 cagcacttaa agaccttgaa aaatcggcag aagttttcac cccatgaaaa cattaagatc
      121 aataaagcaa attgataaat accgttgcac agaatatagg ctctcgaatg aaatgctcta
      181 acacatagcg gtaacagatc attccaggta ctgagcatcg tactttaaaa gtcatacagt
      241 taatgctgcg aaaagaagga ttatatgaaa tgtgattgat tcttatacct tatgccataa
      301 agtgtagctt cagttatgtg gggttcttga gtaactgaag taagaggtta ccagaaaaag
      361 tcaaccctta aattgcagac aaagagcttc tgctaccagt agtattacat catcaaaata
      421 tttcacagac agtcagaaat aagccatact tctgtatgtc agtgaagcag caaattgaat
      481 tctcataata tgttttgaaa atgagtcttg ttaggtttga tgaggtggaa aaggtactga
      541 gatcactggt tggttccagt acgctcagta cacttttctt ggatgtttgc catggctaat
      601 ctttttaatg gcagtgtagc ttgtaaaccc atttggtaga aagctgtaca tctcagctca
      661 gagtatcaca ccaagtaggg tggtaaataa gtttctgttc aagcatgcaa acccttttgt
      721 tacaatacca gaaattttat tttaacacaa gtattaggag aacttcagta tttccttcat
      781 gaatttgatg atgagcagaa taaaatgtca aatgccattt gaaatgcacc cacacataga
      841 tacgtaggta acatgcgcca gctgtatggg ttttgtttaa agacacttat caagacaaac
      901 ttcaattcat tcaggccaaa tattcaagaa agtgagcctg tcacacaccc tcttgatt
//
LOCUS       KCKM01001764             486 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27801apa ultra-conserved element locus
            uce-5280, sequence.
ACCESSION   KCKM01001764
VERSION     KCKM01001764.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 486)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 486)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27801apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>486
                     /note="ultra-conserved element locus uce-5280"
BASE COUNT           98 a          136 c          124 g          128 t
ORIGIN      
        1 cggcggggtc cggtgggctc ctcacaggcc ctcggctctc aaaagacccc cgacaggctg
       61 ggaacccagt ggcacccgct tgagcatcct gctggcctcc ccactgccca ggtgggggct
      121 gcccctcgct ccctcctgct cctggggcct ctcgcatcat cctcgacgtt ttccttctct
      181 aggggcaagt ccctggtgca tcctcctgga gtaattgtga aattattatg gctggctttt
      241 taatttaggc tggatggagg aatgttgtac tgcagctgac tcatttgcta tggattttca
      301 cttaaccaaa ttgattagtc aaccaactag acttaacttg aaagttgtaa tcattcatta
      361 ttagatctaa ttttcgtgtc gctcccagac cgcgttcaga atctgaactg caaagacttt
      421 aatgaagtct gggaggagca cctggaaaac tttgggctgg ggcggccggt gccccgccaa
      481 cactgg
//
LOCUS       KCKM01001765             669 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27816apa ultra-conserved element locus
            uce-6125, sequence.
ACCESSION   KCKM01001765
VERSION     KCKM01001765.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 669)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 669)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..669
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27816apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>669
                     /note="ultra-conserved element locus uce-6125"
BASE COUNT          198 a          118 c          125 g          228 t
ORIGIN      
        1 ggaaatatgt gctatttgca agttgctcct tttggcacac acaggatagc cctttttatt
       61 atgagtcctg ctccatatgc gatcattccc tttttgccaa acttccttag atgtacacca
      121 aattgcagaa agatgaatac caactttgca taatttgaac aagaaagcct tgcaatgcta
      181 cttttccatt taatttacgg gggggaggga aattatgaga tacgtaggac ataagtaagg
      241 gcagaataga gcccttaatc ttaattatgc attctgcggt attataaatg actaaagatt
      301 acttccaatg tttggtataa tcttacagtg tgcagatgtg gttctctttg gtatatgcca
      361 tctttactga actcaaaatt tccataatgc tgtcacattc tgcatgggaa gcagatttac
      421 agataggtaa tccatgtaag gtattttaaa gacagcttat taaaggattg aggcctgctg
      481 ttaaattaca tgtgctttca attgctatga ggagcaaaca gtatcaagaa gtacaataat
      541 ttagctacag ctggagaaag gcctatttaa agttttgatg acagatcctt taaacttttc
      601 ctttaagttc ttttctgctt tatatcttct ctggcatagc acggcatttc cctttatatg
      661 ctgtaattt
//
LOCUS       KCKM01001766             800 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27831apa ultra-conserved element locus
            uce-279, sequence.
ACCESSION   KCKM01001766
VERSION     KCKM01001766.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 800)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 800)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..800
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27831apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>800
                     /note="ultra-conserved element locus uce-279"
BASE COUNT          269 a          125 c          146 g          260 t
ORIGIN      
        1 tatcaaacaa atccttttaa aggaaattca aaggcatgtc tgaacattaa tgtaagctta
       61 gattattgat gtgaaaggga tttaacaatc agaaaacaat agttctttgt tatatttcta
      121 cttttaagca atttaagata ctgcttggga agatatgaag tttcacgaaa ttttcaaaga
      181 cagagcacta acagctctta gtatcactgt gttcatttta agagcaaatt aaaagagtga
      241 aagaacggtg caaataattg tttcatacgt tctttgcttg tgactgctgt aatcatccag
      301 gctgatttac aaatgtagac ttgaaggttt ctcagcttcc tgcagtgtag aagactgtta
      361 ctttggcact cacactcatg cccttgtaat caccactcaa aactgtgccc tggtacttcc
      421 aattcccagt ctcttgactg aacacctcat tctgtgctaa caaggtgtcc aaggtatttg
      481 aacaggggct gtagtcagaa aattgttaat ggtttcactc attaagagtt gctgtactag
      541 ttttggtaat ttggtaactg tctaaattgc aagttgattt tttccttcat tttaaagaat
      601 gatgctaaaa tttgagacca ggaacactaa cagctacaaa atcccagaag ggtgcttaaa
      661 tcactgcatt tgtactaaag caaaggattt ttgtagcaga aaggatatta ttttgttttt
      721 gaggttatgt tttaaaatta ttgagaaatg caaaaacaag tattaaatgg aaacttaaag
      781 acagaaaaat tataaaaagg
//
LOCUS       KCKM01001767             750 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27847apa ultra-conserved element locus
            uce-1107, sequence.
ACCESSION   KCKM01001767
VERSION     KCKM01001767.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 750)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 750)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..750
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27847apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>750
                     /note="ultra-conserved element locus uce-1107"
BASE COUNT          226 a          147 c          136 g          241 t
ORIGIN      
        1 gtttgattac ctgagcttca tcagttaaat gttatgttgc tttctgtttt ggtgctagta
       61 cctagagaga gagtgacaga gacagcgaat atatacagca gggcaaatat ttgttgtata
      121 agataaacac acaattatct aaaatgtagt cttaatatga cttattaaaa tagattacat
      181 tttaatgtgc gctgcaattt gcacattata cagcacgctc tatacatgca gcttctcctg
      241 tgtgactacc ctgacaacct gcacaactga agatatatag agaggcaaaa aaaacgccgc
      301 tatcttcctc taaatggatg tatttggtgt tgatagtcag atacagtttt cacctttatc
      361 ccagcttgtt tctgacccac tgagttagtg ttaatcaccc ctgtgggcac caataatttc
      421 cccatatgtg gaatttgata agttagagca cccacttcat ttcaagaaga ttccagctga
      481 ctatccagtt atcgctatgg acagcttcaa gcacttccat gctggtcctt gtattctgag
      541 ctttatcaag tgctttgcac tttttgtctt ttatctctta attgagacct gactgcaaga
      601 aatgcctatc tcttaaagtg tgttgcatta agtattaact tgaactgctt tggctacttg
      661 aggtacagaa aaccttaaga agccgggaaa aaggtgaaaa aatctcccca aatctctatt
      721 tagaaaaact gtataaatgc tacagtgtaa
//
LOCUS       KCKM01001768             479 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27863apa ultra-conserved element locus
            uce-2356, sequence.
ACCESSION   KCKM01001768
VERSION     KCKM01001768.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 479)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 479)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27863apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>479
                     /note="ultra-conserved element locus uce-2356"
BASE COUNT          170 a           95 c           85 g          129 t
ORIGIN      
        1 agaaagagaa aaaaagaaag agagaaaaca acaacaaata aatcctagga aaaaaattat
       61 ccacttcctg ctgtttcctt tccttcccat aaagtgagtg tcttatcctc tgagaaattc
      121 acttcattgt tagaaatagc cgaaattggc ttgcaactag taaagatgcc aagaatttgc
      181 accttgctct gtgacctaaa gcaaaaatga catgaacatt gacaaatttg acaaggaaat
      241 ttgtgcaaaa aacaacttct atttggctag ccaagcagca aatatgtcgg atgatatgct
      301 ttattaagca atccattttt cagcaatagc tgcaccatct gcaaaggtta gtgtgcatca
      361 ggctttccac agaatttcat ctgcgtctgc agctaggtgc aacacacgac cacatttttc
      421 atgtacatac aattttggat gcaaatagaa tacttgatga aagaggtgac cttccggac
//
LOCUS       KCKM01001769            1077 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27879apa ultra-conserved element locus
            uce-6787, sequence.
ACCESSION   KCKM01001769
VERSION     KCKM01001769.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1077)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1077)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1077
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27879apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1077
                     /note="ultra-conserved element locus uce-6787"
BASE COUNT          295 a          198 c          218 g          366 t
ORIGIN      
        1 gaggtaatga agagtgatgc tttctgttcc taaccctgcc ttgggcctgg taggtaactg
       61 tgggcaaatc actccttctg cctcaatttc tctcattgta aaaatgatga taatgatggg
      121 gatgggttgg tgtttcattt ccagatctga agggaataca tagaaatgaa gtggtaggaa
      181 catgatggaa aataccaggt ggtaaaataa gcatctgtgt tacagacagc tttgtacagg
      241 caaccgatta taaaattact gattctactg ttctttcctg ttgagggtat tactatgtgc
      301 ttgttcacag gactgtagaa aaaaaatctt gctatttctt cggctagcct atctttcagc
      361 ttcccattca gaatctgcca taaggttctt ctgcttttat tcttgcccat tagcatcccc
      421 gcgagggaca cttagagctg gagttaatgg aggataagga cagcaaaggt ctgtctgtct
      481 ttcttttctc tatctcctcc ctttctatct ctctgtctct ctttggccat tgaaaatgta
      541 ggtcatattg catcaccata aaatggaaca gtcagaaagg tgtttgaaaa atgctgacat
      601 ccttagcctg gggtgcatgc cagtgtcctt tgtttacatt gagaatagtc tcgtacctgg
      661 gtaagaacct gcatctctgt taaggttagt ggtacggtac ctaaattatg agtcagatct
      721 taagatgact ttcatctgcc tgcagtaatt taaaattaga cagataaaat gcagccactc
      781 gcaataatga tatacatgag gagctaattt gaaatcttta atctgcaata accgtgacgg
      841 tgtagtttga ataatattac ctttaacaga gcagctcagt aataaatttt gcaaatcagt
      901 cgtgtactct gcattgtctt gattagctgt gcttttctgt cttgaaaagt gtgtttatat
      961 tacatgtttg tatattcttt ttaacaccac tgttttactt tgtgcacagt tttaaataag
     1021 ccaatcagga ttttatttaa aacatggaaa attctgatgc ccagtgtctt attgctt
//
LOCUS       KCKM01001770             335 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27895apa ultra-conserved element locus
            uce-3429, sequence.
ACCESSION   KCKM01001770
VERSION     KCKM01001770.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 335)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 335)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27895apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>335
                     /note="ultra-conserved element locus uce-3429"
BASE COUNT          114 a           44 c           60 g          117 t
ORIGIN      
        1 tgtaaattag cctgtaattt actttcagta gtgtaaagaa aaaaaatcac tttgcctgaa
       61 gtgtatgcat ctttcttaag ggtgtaccca gattttaatt atctaaatgt aaatacttaa
      121 cgaattttac ttagagtaat gagctaaagt gcacactaca taaatgagat gttctaatta
      181 atcatgtatg aactactggt ttaaagaaaa gctatgtgaa ttctgcgaat gttgggctat
      241 tgccaaattg ctaatcagca tttgcattca tagatggctt cacttaataa gttgtgagac
      301 gttcagcaaa tgttatagga aattatgagt tttta
//
LOCUS       KCKM01001771             647 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27909apa ultra-conserved element locus
            uce-7019, sequence.
ACCESSION   KCKM01001771
VERSION     KCKM01001771.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 647)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 647)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..647
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27909apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>647
                     /note="ultra-conserved element locus uce-7019"
BASE COUNT          151 a          165 c          150 g          181 t
ORIGIN      
        1 gtaaatctca ggctggactt ccctgtgaca ctgcggggct cctggctgtg gggaggacag
       61 cagcatcact ccccatcttc cagccatctg cggatggcct cagggatgtg aagagtatag
      121 acacaaagga tcaaggctgc caagcgaggg ggcacaactt agaaggagag gaaagaaaag
      181 gaagtctgat taagttttgt cttgaagtgt ctgtttttgg gtttgtccct gcattgatct
      241 gcaagggaat gaggcaagta atggcccctt ggggaccttc aggactttcc tctcaatgtc
      301 agccgtcatt ttcaatcacc ctctccctcc cagccattaa ttttggccca ggatcatggg
      361 gacttgtcca tctatcactc ctaattgaca ctaaatgatc tgtcagttta ttgatgaacg
      421 gcaggagtgg aattgtcaca atatatttta ctttctaaca actcctcctg acaattttac
      481 cttgtccatc tcactctcct cacataaatc tccattggcc tctcattcct tctcttgggc
      541 tgatctggtg ccagccgcct ccatgccatc ggcacgcatc aaggacatca agatggcggt
      601 aagctgcaat gtgcaggtct agagtgggat ttttttcctc tctctca
//
LOCUS       KCKM01001772            1019 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27924apa ultra-conserved element locus
            uce-7024, sequence.
ACCESSION   KCKM01001772
VERSION     KCKM01001772.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1019)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1019)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1019
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27924apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1019
                     /note="ultra-conserved element locus uce-7024"
BASE COUNT          317 a          197 c          164 g          341 t
ORIGIN      
        1 tgaacgtgga aatattaaga gtaaatgaat ccttattgat taagaagtac aatgctggaa
       61 agtttttata cataacattc tccacacttt gccttttatt taaatgaggt tgttccccct
      121 ccccttaatt attgtgctct tatcatttgt ttaacttcag acaaaggata gtatgttgag
      181 ccaaccttat taagtcttac agattgtata ttggttatat tctgctgtac accacattcc
      241 taaacagaca aaaaaaaagc taacaaaaaa ccctcaagtg tagcattcag cctctcaagt
      301 ccatgatgta tttcatttgc tacggtcaga gcaattttaa caatgccttt cattttctta
      361 tagcctaaaa tgattttctt tctgtgaggc cattctccaa aacttctctt cccctttcag
      421 ggtatcattt gcaatttaaa gctaacctgg tgagtgtact cacaataggc ttgcccataa
      481 aatggttcaa ggcctgcctg catgcctaat gaggttgatg ttgagctatt tagctctttg
      541 tccttccata atatctactt aatgcagttc aatgggagtg gattgttaga agcattaaag
      601 attctattaa gtctttacta aagccactct attctagtcc agctgtatag tggcaagagc
      661 attaaatttg agaatgtagt gggaacaagg ggcctgaaaa agcacctata aaaaagggac
      721 aaatttccta acgaagtaag accacactca atttaagacc tgttactttt atatctagat
      781 ctaaagagtt tctcaatgtg catctcgcag tgttctgaat taactctagt ttttgtcaat
      841 ggatgaacaa ggtacacttt aaatcttcat ttatttccaa agcacatgag atttttgctt
      901 tgccccacta ctgaaaacaa ataacgttat aaatttaatc tcagaggaac taccaaattc
      961 ttgcaaaggc ctcctttgag ataacattta aatgcaatgt ttttccccgt ttgcttaaa
//
LOCUS       KCKM01001773            1148 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27940apa ultra-conserved element locus
            uce-4027, sequence.
ACCESSION   KCKM01001773
VERSION     KCKM01001773.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1148)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1148)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1148
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27940apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1148
                     /note="ultra-conserved element locus uce-4027"
BASE COUNT          288 a          331 c          304 g          225 t
ORIGIN      
        1 cacaaaacct gcctaagcta gaggagatgc cctggctacc gcaaagagat ccactgctgt
       61 gttcacactc tggaggattt tgtccttgag gtgaaaaaat gtggattaaa atctctccag
      121 agcagggaca cgccgctcgc actcacactc ctccgggcgt gcacacctca caagcactca
      181 gcatctgccc cgacccgcgc gccggctgcc tcgccttcct cctgtcttgc caccggccac
      241 tgagcccccc ccagccctcg ccagatgtac aggcaaccct gcctgcacac agggtcatgg
      301 ttacacagaa attcagagct ggctgcacac gcacgagctc aggggccggc aaggacatct
      361 tcccatgcag ggacagggag ggacacacgc gcacacagag ctggcacgcc aggactcaca
      421 cctcacaggg acacacacgg gtacccatgg cacagacctc acgcacgccg gagagttgga
      481 gctcccacgg ctttcgggac acacacagaa gccaagagac attatggcag gcactcactt
      541 ggatttgttc tcctcatagt gagcactggt cttaatgtat ctggccagtt ctatctgcat
      601 atcgccgaat aaaggaacca cctgcagctg ctggaaaaga aaacaaaaga tggttgaaac
      661 acggcggaga gagagcccgt ggccccagtg caacgcatgg gactatgaaa ccgcatcctg
      721 cgtctctgaa gctatggaaa gtgtcaggct gtttaaagca aggtgcaacc cggactcagg
      781 gtcatttcac acctaggaag cgactgaaaa tgatcatgag gctttttgtg tgaggaaaat
      841 ctccctctgt gagcgctctg gagccctaga ctcgccgata ccgggctggt tatggccaga
      901 acggtccagt gctgtaacca gccagaggaa aggctcttta cagcaaaaag agagaagtgt
      961 gttcctgagc aggacttaac tgcctcccat cataatcctc caagagcaca gagggatgaa
     1021 aagccagcat gttggtattt tggtggcaag ttgggcagct gtaggctgct ttgctgcctc
     1081 gactgccagg gatgtggtat ctttccccag ggactcagac tgtactttag cactgtgcct
     1141 gctcgtga
//
LOCUS       KCKM01001774            1181 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27956apa ultra-conserved element locus
            uce-7408, sequence.
ACCESSION   KCKM01001774
VERSION     KCKM01001774.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1181)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1181)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1181
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27956apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1181
                     /note="ultra-conserved element locus uce-7408"
BASE COUNT          310 a          222 c          306 g          343 t
ORIGIN      
        1 gccactgtgg acatgacccc aggacctcct ggctctaaaa atggatattg cactacccaa
       61 gcggctctgg taaagagcag aattggaaat gcagtgtttg tagtggaaat gatttgcaga
      121 aaaggtgggt ctttggaaac aggggaaact ggctgccatc acctcagtac cttctctatg
      181 tggaccagag aaaagaatca gtacctccta cttgctgcag attgttcaag tcttctagct
      241 taggggctaa attcccaccg atgtaaatgg gattagctct gctgaagtcg acagagctga
      301 gctgttccac atgctggctt aggatttctt ccgttatctt tgagcatgtg tagaataaaa
      361 attatagcat tacaattaaa gtccctgata tgctgtggat gataatccat gtctttcctt
      421 acccctttgg agctgagtaa agttgtctca agattatgag ccttagatgt ttagagcaat
      481 tttgactgga tcagaggtta tagcctttgc tttttaacat tctgctttta tttgcaggct
      541 atgaagtgta atagttcacc attttggttt aagtatcaca ataaaagtca gtgaggtgga
      601 acaggcaata agcagccgtt ttacatcagt gctgctgaga cggagcgctt aagtcttcat
      661 taacctacag aggaaggagt tacagaaaag acacttgcaa taaaatacca gggatgaggc
      721 tcagatctct tgtggatctg cacaggcggg cacatgggaa gaccagtctc tggtggggat
      781 atctcctcgt gtctgtgctg tcatgcagga agcaggaggg tgaggacacc ttgcactggt
      841 gggacagggg cggccagctg tgtcaccgcc ggtggagctg acgtgggtgt atgccagaca
      901 ggctgtactg tggggtttta ataactcagg gatggtattt ctgtagggtg catttgcagc
      961 atctctttgt tctttgttaa ggccttttat tagaattatg agactgacag gtctccttct
     1021 gacatgtgat attctgttaa tggtccacat gtttctacat atagtccagg agaaggtggg
     1081 gaatatagag gtaggtggac aattttcaga tttttaggta ctgaaacagc atgcaagtat
     1141 ggcaatgtca gttagctcaa gacatgctgc taatacttct g
//
LOCUS       KCKM01001775            1078 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27971apa ultra-conserved element locus
            uce-2306, sequence.
ACCESSION   KCKM01001775
VERSION     KCKM01001775.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1078)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1078)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1078
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27971apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1078
                     /note="ultra-conserved element locus uce-2306"
BASE COUNT          331 a          205 c          240 g          302 t
ORIGIN      
        1 gagaaatact ttaagtgaag ttcctctttt gtgaggattt ggtctgtttg aaaatgtaaa
       61 taacctataa aaccaaaacc aaagaagatt aaaaatatga actgtgtctt ccattcaaat
      121 agcatttagt tagtgtttgt gacttttccc ttgacaacta gataagaaga taaatgcata
      181 gtttctctta attagccttt ttaattaaaa acaccagagg tatttgtgat cataatgaac
      241 tcttctgaca gaatggtcac ttgttcttct ggatgtcact ccaggaaaat tagatttatt
      301 tttttgttta caggggataa attctgtgct aaggaagaaa taaatgaccc ccacaaaagg
      361 agtggaccct cggttttatc tgaatgagat ggatgtgtat cttgtagttt ttagaatggt
      421 gtggggcagt attagccatc attagcaccc cagtatggat ccaattcact aattacttat
      481 gctgtcttgg ttcactgaga tttaagtacc aagtcaatcc cattatctgc agtctcccaa
      541 gcttgccaga gtcatccgtc ttttatggaa gaaaagcaca agggttatca ataggaccct
      601 gaaatacttg ggattttccc acttcaggag gaggcaagat tagtcctgac taaagtcgca
      661 tcttctctaa gctgctactt tggatgtgat aaaagtgaac gctgacaatt atccataact
      721 acataaagag aaggagagag agggaaggag gcaagagcag cgaggaggga agtctgccac
      781 acacgcctgc atctgtccta cggtctcagg cagcttttca tatcacctca gagctacaaa
      841 ttacaattcg tctgttacaa acacgcgata atatagtcag aaatcagaaa ttaaaatatt
      901 ccaacggcct cgggcctcct cagagagaaa gagagaggga gagaagctga gaaggagaga
      961 aggaggaggg agagagagag agaggagtac accgagcccc tgtgctgcct gtgttgtttg
     1021 tgccctccct tctccatcct acatgtttaa tgtctgcggc agtaccgagg ccttgtct
//
LOCUS       KCKM01001776             963 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 27986apa ultra-conserved element locus
            uce-5044, sequence.
ACCESSION   KCKM01001776
VERSION     KCKM01001776.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 963)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 963)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..963
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27986apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>963
                     /note="ultra-conserved element locus uce-5044"
BASE COUNT          214 a          218 c          215 g          316 t
ORIGIN      
        1 cttctattca aggaaacgtt tctgatcctt caaagaaaac ctacatgata caatggctgt
       61 caagacctga tccagactac cccatccaga aaatatcttc aagtaaaaga cccatttata
      121 actctgcctt tgcccttaaa tgcatgccac atcgaatgtg gactttgcct tttgctctct
      181 tcttctctct atgcggaaag ttcccttgac tttgccgagt ttaaatcttg ggctgaatct
      241 ttttttcaca ccaggcactt ggtgctcggt gtctttcttc tctggagctt gcgtagcact
      301 ggtggtggag gtcttgaagt gttggctgtg tgaagttgga tctccacggt gtgttgcagt
      361 cctctgaaag ggagctggga tcggtttgct tgttgcttgg tgatggtgaa aaaaggctct
      421 tactggttca cgatgttcgg tttgatagca aaactgagaa cttattgtga atgtgatcac
      481 atcacaataa tgacaccttg tagtgctaaa gttctccttt atcgaaaaaa ccctaaatct
      541 cataactcta gtttcagttc gctgacaggg tagtccgatg agtgaaagaa ttttttcatt
      601 ccattttcct ttgcggtgcc attgcttttc tcacccttcg ctgctcattc tttattcccg
      661 accctcacgt tttcgtttgt gacccgtgga gggctcactg ggaagcagaa gctgagtttc
      721 tgtcggaact ttccgtgctg ctatgacacc gtccgctctt gccaaactcc tggtctgaag
      781 gtttgaaata tctttttccc ttgagaaaag ctgcactcgt ttttcccgtc gcacaatttt
      841 tttgccagtt ttgcgtactt tcacttgaga aagaaaaccg aagcagaaca ggcatggtcc
      901 atggtgaagg ttgcgtggtg gtgtttttct taacccggcg gaggcaatat ggtgttttca
      961 tcg
//
LOCUS       KCKM01001777            1013 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28002apa ultra-conserved element locus
            uce-4610, sequence.
ACCESSION   KCKM01001777
VERSION     KCKM01001777.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1013)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1013)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1013
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28002apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1013
                     /note="ultra-conserved element locus uce-4610"
BASE COUNT          281 a          220 c          213 g          299 t
ORIGIN      
        1 atattcagcc tacctattcc ccagcaacag aaaagggaat cccaaagaag gcgtagtttg
       61 accagtctca ggtgggcccc tctatttctc cccatctctc tccacaatat tgcatccagc
      121 aatgtttcca gaggtagaaa aggactggat gtagttcatt ccagtggctc acagtactct
      181 gtagagagct gagtgctaga acattcttgt tgaccctctc ccctcctcct ttgtgcagac
      241 ctatgtagtt atcagtccct gccaaggcaa ggatagcaaa tttcaaagcc taaccaaaat
      301 ttacagccac tgtcctgtca gactggctgc agactacaaa aatgtgagga gaaaagccct
      361 ctggcaagcc atgtgtgtta aatgtaccca agtggtgagt cagtgagttg gaggctgtat
      421 gggtggactg tgacagaaga aaatatcctt atcccattgt ctctcttgtt ctcttctctt
      481 ccccaggaac gagtggagta tctctttctc ataattttta cagtggaagc atttttaaaa
      541 gtaatagcat acggacttct ctttcacccc aacgcttacc tccgcaatgg ctggaattta
      601 ctagatttta taattgtggt agtagggtga gtacgacatt ttgtctctga atgcactgca
      661 cgtgtgggga aactgtcaac ctttgggagt gtgagagggg gagaattctt ggaacattat
      721 gtatgggtga tattagaggt tgctgtccat tatgttcctc ctacaactac aatttgttct
      781 acctgtatta gtccccctac agactccaag tgtttttcca agttttactg cataatctaa
      841 aactacagtt aactcactgg tcttctgcag tgattgattc ccctaacatt ctatgacatt
      901 aagctcattg ggaacaggga aagcaaaaga ggaagcagtc aaaatcaaat gcctgagtgt
      961 tcttaattgg aagaaaatcc ctttgtaaat ctgtgtgaat tttaaaaaag aat
//
LOCUS       KCKM01001778             536 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28017apa ultra-conserved element locus
            uce-2136, sequence.
ACCESSION   KCKM01001778
VERSION     KCKM01001778.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 536)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 536)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28017apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>536
                     /note="ultra-conserved element locus uce-2136"
BASE COUNT          149 a          121 c          113 g          153 t
ORIGIN      
        1 taacctctcg aaaaagctag taagaaggtt ttaatgaaga gaggctactc ttctaacctt
       61 cagaataaaa aattatatat atttatccac gttacatccc caggctcctg cagctccccg
      121 ttccgaacgg cagtgcaggc acttaagccg gggacgctca cgtactctgg cctctccgcc
      181 gcgctcgcgg tgtacagtca aaccagccag gcccagtaat gatttaggtg agattaacaa
      241 atatgtcaat gtctattttc tgcttaattt aaaagcagcg tctataaaga tttttgactt
      301 ctgaaccctg ttctcctgga agaaagaagg taacaatgag gaggggggat aaagagtgat
      361 tatcccatca tcgatcgttt gtcaggagca tttcttattc actggactat tgtaaaaagc
      421 taagctctcg atcaatcccg taagccccct gtacaattaa atatcttgga atggttttct
      481 ttctttccta gtcagatctt gaggcctcag ggtttttcgg aaaaagccgg ggcttt
//
LOCUS       KCKM01001779             427 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28031apa ultra-conserved element locus
            uce-4094, sequence.
ACCESSION   KCKM01001779
VERSION     KCKM01001779.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 427)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 427)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28031apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>427
                     /note="ultra-conserved element locus uce-4094"
BASE COUNT          127 a           74 c           66 g          160 t
ORIGIN      
        1 gttttataaa ggttttgaac ctctctaact ctgtagtttt gaagacttgc cgtatttctg
       61 agctataaca aggagatttt tgtaaaatgt tcttcatagt ggaacgtgtt ttatacaaga
      121 aacatactta aaaagctaat ttcttttctc ctttctgcac tgcaatccac gaagtgtgat
      181 taataataga tttaaatttg ctaagtgcat ttactccttt gtgccatcat aaagagaatc
      241 tattactgta aaattgaggc ttagttccaa attgtgccat tatgaagttt tcttccagca
      301 atgttttgtc tctaatacac ttccctcatt gtaattctat tgcaaacctg atgtctagca
      361 tcaagtctca caataattat tttaaattgc tactaggaac agtagtcctg gtgggatata
      421 ttactac
//
LOCUS       KCKM01001780             525 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28046apa ultra-conserved element locus
            uce-5028, sequence.
ACCESSION   KCKM01001780
VERSION     KCKM01001780.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 525)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 525)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28046apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>525
                     /note="ultra-conserved element locus uce-5028"
BASE COUNT          154 a          153 c           85 g          133 t
ORIGIN      
        1 tttttttccc cccttgtaat agtagattcc agctgcagga ctcctcaact tttcctttcc
       61 ctcttcctcc tacttcactt ctccccctcc ttccctccat ctctccccct ccttcccatc
      121 cggcatctac tcacacacac gtactctcta actttttgtt tttagtagcg gctgccccat
      181 aagaaatgct atccaacaga cctggtgcct gtcaccgctt cccatcacat gcctggtaat
      241 taaactctga ctgatttatt gactgacagc caacaaatcc caacccagtt tttatgatat
      301 acatgcttcc ccaggctaaa ttcactcaaa caacagccca gctgaaaagg aggaggaaag
      361 gggggaaaaa aaaagtgata gagaaaaagc tctacacaca cgagcgcgca cacacgctca
      421 catacaaaaa aaatctggta ttggtagatg aaggggagac attttgcaaa gaaaaaaacc
      481 tcagcacaac atctctttca aatccagact tggaaaggga atggg
//
LOCUS       KCKM01001781             535 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28061apa ultra-conserved element locus
            uce-5933, sequence.
ACCESSION   KCKM01001781
VERSION     KCKM01001781.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 535)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 535)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28061apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>535
                     /note="ultra-conserved element locus uce-5933"
BASE COUNT          116 a          126 c          110 g          183 t
ORIGIN      
        1 ctgccattct ccatggttga atctgtttct gatgcttgcc atattcgagg gttatactgc
       61 tgcgctttcc atggtccatg ctgcccttct gctaaatgct gccttccctc ttgcttagtt
      121 aatggttaaa gtggttgcca tgtccagcca aggctggcct gttggctacc tcccctgctg
      181 gcccagctgg gggcgctggc aaatcttccc cagctgcccc ggtgcctcag gagcgttcca
      241 cacaacgcct gtggaagtgt acaaagtgtc aacctcagcg tagtttttaa cctggagtga
      301 tagctttact gatttgccac tttactactc ttgttaatga atttttaatc ttcttaatga
      361 cattaaacac ggaaagtaat taaggaaaac aagtttgaaa ctgctgactt aaacccttta
      421 ttcagaacta tttaatgtag aattaatttg attttgccca ttattcaaat gaacacatta
      481 ccttcctgtg cattggcctc ttttcctttt tgtgtgtgtg catgtgtgtg tgttt
//
LOCUS       KCKM01001782             737 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28077apa ultra-conserved element locus
            uce-573, sequence.
ACCESSION   KCKM01001782
VERSION     KCKM01001782.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 737)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 737)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..737
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28077apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>737
                     /note="ultra-conserved element locus uce-573"
BASE COUNT          236 a          138 c          152 g          211 t
ORIGIN      
        1 agaacgatgc tactttggca gcagtgctgg cagcttgcta tacgcttact ttcaagcaca
       61 agatcaccaa gtgagttcat agtacataga cagagcaagg caaagtgcaa acgtaccatt
      121 tactgaagct attcaattaa agaaaagtcc ctacaaagaa aatgggttta tagcacgtca
      181 tgaaaaaata cttgcctttt actttaaaaa gaaaaaagaa tgtttaagga ggatgattgt
      241 ggagtatgta ccacttctaa cagatttgct gtgcagaact acataagtgt gagtgatgta
      301 gaggtacttg tttattatag agcacatttc aatgcagtaa tcataaatat tgctaaggtt
      361 gtgctctgtt gaaatatgac ctacatactc ttgattgttt gtgttacgtg atttgtctga
      421 cacccattac attctgggta atggcagcca tttgttgctg tgcacagcag gctcttttga
      481 caaaagaaaa taggcagcaa taaaaaagct atagtctgaa ttacattctg cacagcgctg
      541 cactgctgag agtttgtgca agtgtgttaa caatgctctg aactgcctct tgtcagcctt
      601 cagcccgtaa tggccatctg tccttccata aatctgtcaa aacctgctaa gttcaagaga
      661 gagcacagaa tataccttgt actgtcaatg ctaaaatgta cacattggca gagaaatcgg
      721 cacgtgtgaa ataatcc
//
LOCUS       KCKM01001783             962 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28093apa ultra-conserved element locus
            uce-917, sequence.
ACCESSION   KCKM01001783
VERSION     KCKM01001783.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 962)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 962)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..962
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28093apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>962
                     /note="ultra-conserved element locus uce-917"
BASE COUNT          310 a          173 c          153 g          326 t
ORIGIN      
        1 aagggcaaaa tgtatttttt gttttatgac aaatgaatgt aaaaatgtgc atgccttgtg
       61 gcctagagga caaaacagta ggatcaatgt tctttttgta ctctatgaag cttgagatta
      121 aagtccccac tgataaactg aacattcttt aaaagtgacc agaagcaaac agtgtctgtt
      181 tgctgctact ttattagaaa gataccactg agaatagcta cgaatactat ttgatcttaa
      241 acaggttgac caaattattg cagttggctc cagtacatga gatgctttct gcaaattatt
      301 gtttctggtt ataaaccttt ataatatctc agaatgaatt atgtatgtat ttcatgtttt
      361 cttttctttt atcagccttg atgttctcat ttcaagtttc accctagcct cctaataatg
      421 caatattgag gccattcaga cactaattat gcctccatgg ctttcttgaa atgactaaat
      481 cagcatcagt tctataatta tcattagcaa gtttgtatct gtgcctcaca tcacatgaaa
      541 agcacaactt taaatgattt atgaatatat gcatctataa catcgaacgt gcactttcta
      601 atagtctatg tacaagacgc atagagacac ttcagacaca tgcacacctg gatatatgtt
      661 ctcatcttcg ctgaacacta ctgtgtatct tattgtataa aagcaaatac aatattgtcc
      721 tcttaataga gccatgtatg tatgagatat ctgtacattt aggcatactg accatttaaa
      781 aaggacaaaa tgtaagcaag tgttcatcaa gaccaacttt cagcctatat gatttcctaa
      841 ttttatttat gtttgcataa aagcagagca agaatgactg acaggacaga aggaaatata
      901 caaatgcaat tcccctatat tttcattgtt tctccctttg aattattgat gttgccagta
      961 gt
//
LOCUS       KCKM01001784            1056 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28109apa ultra-conserved element locus
            uce-2729, sequence.
ACCESSION   KCKM01001784
VERSION     KCKM01001784.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1056)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1056)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1056
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28109apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1056
                     /note="ultra-conserved element locus uce-2729"
BASE COUNT          230 a          200 c          183 g          443 t
ORIGIN      
        1 tgacagcctt ataaacgtct aagtttgata tggcaatttg gagactaatg atttctacgt
       61 taaattttta ttttcttcca aaaggctatc ttcctgttct tttttttaat taggctactg
      121 tgtttgcaag cttcctagtg ataccttctt ttctcaccct gtatattttg tcttattgaa
      181 tgactttcat gtctttatgg aatgcagtaa tgctacacat ggagaagtca atgagttaac
      241 atagttccct tttttttttt ttgcaagttt tatcagttgt ttaatggcaa ttgcacgcag
      301 cttgttctcg ctctctcttt ctctcttagt tttaatcctc gctttttagt tggttgctct
      361 tcacagtcat tcatgttggt ctgttggatt tctgtttttt agttgttgtg acttcttttc
      421 ttattttttt aaacctttct gtaattattt tgctgctgag tttcttctgc ctctctcttc
      481 acctcctcat tttttgtctt gcagtcctgt tactctgatc aacttctggc cagtagactc
      541 tgcgtgagta cttttgctga agtgtgctgc tgctgctact gctgctgcgt tccctcactt
      601 tttttttgtt tgtttctttg tttagtttta catgagttca ttcccttctt ccttttttgg
      661 tgcactctcc aaaggaatat tttgatccca aaagagtaga atgggataaa accaggaatt
      721 tgcagcaatc gtggattgtg tactgtatgc tctttctgga gtatgtattt tccttgaatt
      781 aacaaggatt ttggtgcagt cctactaatg ctcatgaaag tctgtcattt aaaagcctgt
      841 gtttctgaat aagtgtcaat ccctctgaat gtatactaaa tgctttctga aagacagaaa
      901 ttgaacttga tggatttcac tcagtttcag gaattacatt gttttgtaga taaagctgta
      961 attcagattt atgcgcaact gtgcacactt gcacactcat gtttccccag ttaatccaaa
     1021 gcgcactgga tatttatttt taagtacgct aagttt
//
LOCUS       KCKM01001785             927 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28124apa ultra-conserved element locus
            uce-7967, sequence.
ACCESSION   KCKM01001785
VERSION     KCKM01001785.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 927)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 927)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..927
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28124apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>927
                     /note="ultra-conserved element locus uce-7967"
BASE COUNT          291 a          205 c          190 g          241 t
ORIGIN      
        1 tgacagcacg gaataacaca ggccagcctg taggaaataa gcaactgtca gcactcccat
       61 acgagtgata aagatatata tttttaagtg tgtatttaca caatctcaga tatcagaagt
      121 aggacacagc cacatcacgc tggctccaca gtcactgcaa gaaaaacaaa agcaaaatac
      181 tctttcctac agagagaaga tggcagtata aaaacccacg cagcctttta ttagctgaat
      241 catccttgct gtagctggcc agtccctgac ctagggattt ctgtacctaa tgttttcagg
      301 gagataattt ccacagcata cctcagcttc ttagaacgct cccagagagc aaagtcaatc
      361 ctaggtcact cttccagtgt agtttccttt gtactaaatc ctactttcaa gaaaattctt
      421 gccatggttc agtggtattt aacctatcat ataatatcca ggtttactgt gttagaagaa
      481 gcagaacagt attaagcttt tcccacaagc ctgtgattgc atttgaccca gtaacctgta
      541 ttagattaac atttattcta caactccaca gcaagccttg gacctggctg agcagcagtt
      601 tatagaggac actaaccatt tttacaagtg gagcaggaaa agggaattga atctgaggga
      661 gtaattccaa gcaagtatgt tgctgcagcg gttaaattgt ttatacgagg agttggggaa
      721 ttacatctga ctgacctctc tttttatctg cttaaaagac aaagtgcagg tctccatggc
      781 gagcgctaac tcctggggaa tgcggcataa aaatgcatca cggcaataga gcctcaatcc
      841 ccaccaagga gggagacctt tacaggaatg caagcaagtt aaaatcacca ggattagaaa
      901 ggttttcacg ttagccagcc tgcaagc
//
LOCUS       KCKM01001786             330 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28140apa ultra-conserved element locus
            uce-3419, sequence.
ACCESSION   KCKM01001786
VERSION     KCKM01001786.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 330)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 330)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28140apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>330
                     /note="ultra-conserved element locus uce-3419"
BASE COUNT          111 a           72 c           42 g          105 t
ORIGIN      
        1 ttcaagtgaa aatatataat tccaggccac tcttccaata catcacagtc attttctgca
       61 ctttagttgt ttttctctcc atttttccca caaaataaaa catcattaca gcaggtttaa
      121 agtgcacttt agtgcctgca atcttcccat gctattcttt aatatttcat cattaaatag
      181 caaaataacc tgatatgatc ctaatttagt gccaattaca ctgcattgat caaagtgacc
      241 ttttcatact ggagcacaaa aatcaatccc gctgtacaac aaatgtcagg gggatgagag
      301 caacatataa tctgtgacaa tcaaaacatt
//
LOCUS       KCKM01001787             713 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28155apa ultra-conserved element locus
            uce-2350, sequence.
ACCESSION   KCKM01001787
VERSION     KCKM01001787.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 713)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 713)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..713
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28155apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>713
                     /note="ultra-conserved element locus uce-2350"
BASE COUNT          215 a          145 c          120 g          233 t
ORIGIN      
        1 gttaggtgct gagattaaac tagatcttaa tacatctgct ggcctttcat cacagcttgc
       61 acacgcgcta gttgctcggc tagccatttg caaaaatata gaagtgaata attaagcgtt
      121 actcctttac cggcacgtta caaaaataat ggtatattta aatgaacatc cccctttttt
      181 gacaatttaa acaattatag cataattagg cttatttcaa agttttctta agtaatttga
      241 catgccaacc atttacattt caggttttta ttggctgaaa agtcagtcgt gaaacacaaa
      301 cacacctgtc agcaattaaa aaggaagaaa tagagaactg ttcaggaaat aatatctgtg
      361 ctaattaaaa acactagtta aaagcttcct gtttgttcct ccagttgccc caaggactga
      421 ccttcccccc aacccatttt ttcatatgtc gctaacatgg tttccccatc tcctgcttac
      481 aatgtgtgta agtaaggctc ttagacagag acagtccttt tgcttgttag aataggtaga
      541 gaagagtcag gtactcatgc ttctattttt gatagcatac tctgacatca gtactggttc
      601 tttgttgacc atgtgagaaa taaacctggt tttctttata aatgcaaggt gttccatgtc
      661 tgctttttat acagcacatc tcacacatgt ttaaatggat gcatctccca att
//
LOCUS       KCKM01001788            1177 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28171apa ultra-conserved element locus
            uce-553, sequence.
ACCESSION   KCKM01001788
VERSION     KCKM01001788.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1177)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1177)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1177
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28171apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1177
                     /note="ultra-conserved element locus uce-553"
BASE COUNT          365 a          240 c          210 g          362 t
ORIGIN      
        1 aaatcagact tacccaaacc catttactct tactttgtcg gcagcatagt tattcccttt
       61 tgtttacaaa tgagaatatg atctaaaaat tccttccaat ttttatgttt gcctggaaga
      121 atctaataga cgcaaccatt agttcaaaaa gctacagact ggtgtgaatg tgaacaagaa
      181 gataataacc attaaacatt taatgtttct aggaatccat gaatgtttgt acacagtttt
      241 gagatgacgg attctattaa aattcattat accattgctg gaataaaaaa aaaataatct
      301 tttttcttag ctattagctc tttttatttt gccagtactc agcctgaccc agcctgtgaa
      361 gctgcaagtt ggcagctgtg attgcagtac agatttcaca cagtgtaatt actgcagtga
      421 cactaggact gagaggtaca aagaaaaaaa gaggccctac aggttattag cactaaacac
      481 tgggagaaat caaacggaga gtcaatgcgt aatttcgagg cctatcaagc ctcatcagga
      541 acagcaggga ggaaagtgct tcacttcatc atctcactct ctgacttttg ttgaaaatta
      601 cagtaattaa aaaagagcta agtacttctc aggcaagggg tcttttcttt acccatcacc
      661 ttttagttgg ctgctgattt tgtgtgacct ttttcttggc tctgtctatc gcagtcaaca
      721 cagatctttg ttgaatagct ctctaaaacc taattactat ctgctgggtg attcagtatt
      781 gatcagaaaa ggtggcacag caaaataaga gtaccagcac tgtggcccca gcaatcgaaa
      841 agtaattcta gccccataga aacgtccctt ccatcccact tattagaagc agctgtgatg
      901 ttgccaaatc gatacacaac attgaattgc ttctttgact aaaaagctct tttttttccc
      961 tccagaagtc gggcacaatc agtggcctct gacttcaaag gactgtgccc taatgctata
     1021 tttgagtgaa taaattccct gttggcaaat atttctcaga tcggagggtt aagattaaaa
     1081 atcactattt ttatgtagac attgtaattt cacatttctg cagcattaaa tatcactccc
     1141 aggttttgct agactcaaat cctagcacac aatgtct
//
LOCUS       KCKM01001789             685 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28185apa ultra-conserved element locus
            uce-6158, sequence.
ACCESSION   KCKM01001789
VERSION     KCKM01001789.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 685)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 685)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28185apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>685
                     /note="ultra-conserved element locus uce-6158"
BASE COUNT          156 a          148 c          199 g          182 t
ORIGIN      
        1 cgcggggccc ggggaaggga aggggccccg gaggtttccc cactgctcgg tcccaagtcc
       61 gctttagcag tcaggcatgg agttgaatgg aagctgcatt cttttgcgcg gtctgctcca
      121 gaaggcactt ttctttttcc atgggaggga aatcggtttg agagcaaatt gggggaaagg
      181 gagaaatacc aagagagcga gagccacatt atgtttccat tttcctttaa tgaaggccct
      241 gtggaggtgt atttgaaaac acagggtctc ctatgccttc aaggagggtg agaacactgt
      301 gctggctggt tccagggcca tatgcagcgt atggtggcca atgaaacggg gcctggctcg
      361 ttctcttgct tgtcttggca gcttgctcca tggcttgtat taccagccct ggaacacaac
      421 cactgccaaa ctgtgtgtgt gtggtgtgtt tggactctga gagctcagca gaaacaaatg
      481 cttctgcagc tcagaccagg gtttttttgc tagttttgag aaaactcgca tgaaaaactc
      541 gtatctggag gctgttgaca gagcctgcac tgggaatttg caggtgagtg cttgcatggg
      601 gacatctggc agtgccagcc cttggagttt agattcttag tatgactctt agtgatttaa
      661 aaaagcaaat tcctacccat ttagg
//
LOCUS       KCKM01001790            1037 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28200apa ultra-conserved element locus
            uce-7643, sequence.
ACCESSION   KCKM01001790
VERSION     KCKM01001790.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1037)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1037)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1037
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28200apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1037
                     /note="ultra-conserved element locus uce-7643"
BASE COUNT          340 a          185 c          215 g          297 t
ORIGIN      
        1 tcagaaacca agggccatat cctgcttgct ttactcgaac aaatagtccc attgcatttc
       61 actgagatgt acagcagcaa tataaaacca gaaaaaagct cacatgaaat catcgctgta
      121 actgagatta gaatctaaca gaggcagaat tatgcatgta tatataggag gaggaaaaga
      181 ttgtccaaaa tattcattta atttgaatat gtagaggaaa tgaatgaaag tgttgggcca
      241 aatcctgctc tcatttacat taatgcagcc ccacgaagtc tgttgagggg agaatttgat
      301 ccgacattag cacaaactaa cttttacgtt tgccagattc ttatttgctc acagcatgtg
      361 gccggccaga aatataaata aatcaaatct gtttctagga agaatccagc aatcctttga
      421 aactttcctt ctttgcatta caagaaaaga aggggtagaa aaaaggggaa aggatggagg
      481 gttacataaa agagagcagg tgcggtcgtg cagaagtaac tattcagcat atgtaagtgc
      541 agttggaaaa tcattgtctt gcagagaata cttgaaattg gtccctaatg gccttggttt
      601 ttgtcatatg gtcttgatta tcaggctaaa attgcattgc cgatgccttt agtgtgaacg
      661 agatggatga ataattatta cgtgcgctga atacctttct gcaaggagga accaggacat
      721 cccctggtca ctgcagctcc catttcacct tgctgtcaag aaaactgcaa gtggctaatt
      781 catcactttg ttattattct taaaaatgta tgtttataat actaaatgtt cgtacctgca
      841 ctaagaatgg gcaatgcaaa acctcagtgt tatcaagaat aattgcaaga cccagttatt
      901 tctgggacta aggggatgca aaccctaagt gccttttttc taaagaccct gctatatctt
      961 ggcattgatg cagatatctg tggctatatt aaggagcaaa ataagtttct agtaagtata
     1021 ataagcactt acaaggt
//
LOCUS       KCKM01001791             989 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28216apa ultra-conserved element locus
            uce-1314, sequence.
ACCESSION   KCKM01001791
VERSION     KCKM01001791.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 989)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 989)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..989
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28216apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>989
                     /note="ultra-conserved element locus uce-1314"
BASE COUNT          246 a          235 c          209 g          299 t
ORIGIN      
        1 agggtttcta ccaaagcgga cggcaaaaca cccggctggg accaggcaca ggatccagtc
       61 tgtctgaggt tggtgggaac ttcagctgtc agacgccaca atatgccagg tattttgtct
      121 aaagcaccca aaagcttggg aaaaggagca ggactggaga ttttctccca aatgtcgttt
      181 tactgtggcg ctggctgccg ctgggtctgt gccgcaggac ccaccttcca caacttcact
      241 taataactct gaactgggct ctgcaattta gcggcttctg aggagcttga tgctaatgca
      301 ttgattttgc tttaatagaa ttttgttgtc aatggccggt gctcagcacg gtgcaggctt
      361 caatctttac ccatctgagg gctctgctcg tttccagttg agctccgttc atttccagtt
      421 gaataggtta agcaaagaca gacctcactg ttctcaattc actttatgat cctcccatca
      481 taaaaaataa tatcagcacc ttgcttttca tgtcagaact acatttgagc tgctattccc
      541 tatgcccatg agtaaatccc ataaaagccg ccccgttgta ctgtcgctat ttttccttgt
      601 gggtgattga ttgatggatg agtgctgaca cttcaatgaa gctatttcga ctgccatctc
      661 aatccgatga tgtgaggggt atattttctg tccatgcctc attacttcag aatgacattc
      721 ctggaacttc atttactttt tccctccttc cctcaagcgc catatttttt cccatctagg
      781 ttatgcatgc cataaaaaaa gcaatttgct attatatgtg gcataagggc aacactttcc
      841 ctaggaggta aataagaagg gtcttttttt tctcctccat gttgagttta gggatcatgt
      901 caaaatttcc caaacaatgc caaaacaggc ccttctgcac aagccgcggg gaatacagta
      961 aacacatttg gtctgatttt gtgaatgct
//
LOCUS       KCKM01001792             431 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28232apa ultra-conserved element locus
            uce-3976, sequence.
ACCESSION   KCKM01001792
VERSION     KCKM01001792.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 431)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 431)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28232apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>431
                     /note="ultra-conserved element locus uce-3976"
BASE COUNT          144 a           81 c           76 g          130 t
ORIGIN      
        1 gctcgctaat agaccatatc attgataaac ttcctcgtta agaagaaccc aggacaacaa
       61 atgatgctgg ctctttaaaa gtttatccct atggcaccat catgtaagca tacatatggg
      121 acagtaaaaa tggaagacga cacattaaat gacattatta taaaatgcaa tactcttgga
      181 atgatccctt attaaattag gctctatgat ctgagatgaa tttccccgat ccctaatcca
      241 tcactagaga aatattaaaa gataggtctc aactggtatt agaatcgcac tcagtctcta
      301 ctttcattat tttgaattag ggtgctactg gggggaagcc tcttaatgag aattagagtg
      361 attcactggc cttcttttgg attttgacaa gtaaaatatt aactcttcag tcacagctgt
      421 cggaattaaa a
//
LOCUS       KCKM01001793             296 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28247apa ultra-conserved element locus
            uce-2769, sequence.
ACCESSION   KCKM01001793
VERSION     KCKM01001793.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 296)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 296)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28247apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>296
                     /note="ultra-conserved element locus uce-2769"
BASE COUNT           92 a           68 c           39 g           97 t
ORIGIN      
        1 ttagaaatca gactagccac agccatactc atctccataa tagcacaatt tccaattcac
       61 gcttcatttt cattaatgtt tctagccata aatttttaag cgtatgataa aaaatttctg
      121 aagcggcata aaactaacat gaagagggag ttcattagta tgtgacccta attagaaatt
      181 ccatattaac ttcccatttc tacttgggca catccaatag cagcaggcct aatatgctgc
      241 gtatcagtct cacatctgtt ttaagacctc ctctccccaa tgctcatttt tatttt
//
LOCUS       KCKM01001794             747 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28262apa ultra-conserved element locus
            uce-4507, sequence.
ACCESSION   KCKM01001794
VERSION     KCKM01001794.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 747)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 747)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..747
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28262apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>747
                     /note="ultra-conserved element locus uce-4507"
BASE COUNT          270 a          122 c          134 g          221 t
ORIGIN      
        1 atctactgta acattatctt acatttattc aatttaattt cagtttggga aggatagcat
       61 atagatcttt ttataagctt gtaaggtcac caaatttaaa ttaaagtgac ctcttttaaa
      121 gcacattaat aaaagtacta tgtggaagga aatttaatat gaatggttaa aatgcatgga
      181 attcagattt tactgtcaaa cagctcaatt aaacaaattg aatttttaag caacaaaagg
      241 gaattgaatc aaattagaaa cagagtggga tctgaaatgt ggacatttat gagtgatagt
      301 cacagggccc tccagcagtg agttttcttt atttgttgcc tcagcagtta gaggggttgg
      361 caggctgcaa cacaaaagga taaaaatgtt caccattgaa acacagtttt tggctcccaa
      421 taaatcatct gtcacttcat cacagcccgg tagataatga gcaataaagt tttcacactc
      481 aggcaatgag gaagcagaca caagaaatac agctaaagct gctgtctttc ttccctgtaa
      541 acgcaaggtg ctttgtataa taaatgacct ctggatttct ggaaaagaat aattccagcc
      601 gcaataaaag aaaccatttg atgcactgaa aagcaaaatc taataacatt atttagttcc
      661 tttaatgaaa gaaataatca cattatatat atgagctaca gccatctata acaggaagag
      721 attccagggt attacctctg aagttgt
//
LOCUS       KCKM01001795            1153 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28278apa ultra-conserved element locus
            uce-736, sequence.
ACCESSION   KCKM01001795
VERSION     KCKM01001795.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1153)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1153)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1153
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28278apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1153
                     /note="ultra-conserved element locus uce-736"
BASE COUNT          364 a          217 c          205 g          367 t
ORIGIN      
        1 gtttaatgta acagtaaagt tcagttttct accagctctt cactacaata aatttttgtg
       61 ttcgattttt ttctctgaga gaataaagca ttgctctcta cgagtgatag taatctattt
      121 ttctgttcta tcagggatac attaaccagg aagcagtctg cacacgttta tatttcttag
      181 catagaaaag acaaccagat atacaccatt aaaatatatc aatgaaaaat aacatcttcc
      241 tttaaattaa ctaatatcta catttaatga agctcagttt atagtgattt tctggatgaa
      301 gtgctcttct ttcagcctaa ttatgtgcac agctttcaga caacaaggag tgtctttaac
      361 attagataag aacctaggct tttatttcaa tcaatagtct ttagcctttg aactcgtgtc
      421 agaggaagac cagtccgtca cattcagttc tacctgaact ctttcttctt aatgcacact
      481 gccgtttgca gaaggaaaac acgcagatat gcaataaaga agcaagtaaa ctatttaggg
      541 cattttgtgt acgggggggg ttgggatctt ttatggctgt aaaaatgtgc gactgtaatg
      601 atgatgttaa aattttcttg tttcctttca ctgggctttg tgtatctcaa aggagcccca
      661 tatggtgctc tttgtccgtg tcattacctc gttacagccg ctgtctgcca gccaaaggta
      721 gaacgctgca gctgtagaca gcgatacaac tggaattgtc taaggtcaac agtgccgtaa
      781 ttactttaaa atgtcagcgt acaataaaat acaacagttc atctggcaga aagcaaatta
      841 gctttgacca tagcgtaatt acccttttct cagcaccatt agaagagatc aaatctccac
      901 attcagtgtt tgaggaaagg ccatcagagt acactctacc tgacaaggat gcacatttgc
      961 cattttgaga tgtaattaat tgtccctata atagaaattt ttatatttga ctctggaatt
     1021 gaaatgtgta ataacctggc ttcttcatat ttaaccattt ccactctgaa taagatatgc
     1081 attgtaaagt gaaactaggt gataacaaca caaggaaaat gtgttaacca ctcaatcaaa
     1141 cagtaaaaaa ctg
//
LOCUS       KCKM01001796             841 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28293apa ultra-conserved element locus
            uce-3455, sequence.
ACCESSION   KCKM01001796
VERSION     KCKM01001796.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 841)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 841)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..841
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28293apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>841
                     /note="ultra-conserved element locus uce-3455"
BASE COUNT          233 a          188 c          157 g          263 t
ORIGIN      
        1 tgtatgcatt ctgatgcatt aaaataactg ccttaatctt tatgtgcatt aggatcaaat
       61 ctcccagtgg acactcagaa tccgaactag tgaaaatagc tgcgctctgc agccagtggc
      121 acccactcca gatgttctct gatgtgggaa gctttaattt gtgctcaggg cttcacagaa
      181 gccctaacag gaacggtgcc tcggggacac gcagaattcc tattgccctg acatgggtgc
      241 atgtgccggc agaagaggcc ccgttagtca caggtaagac agacaaatca aatggtagca
      301 tccccccatc ggcatttcta ttatctgccc cactttgtgc caatttcctc cagcttcccc
      361 aacacctctt gctttgctgt tcttccttaa gacatgggat ggggatttgt caaagtcaat
      421 gagcacttta ttacagtgag agtgctcagt aatgaacaat tcagcaattt aatgagattc
      481 tgtagatctg tctccaacct gtccatcaag tttcacttct ataaagcacc ctgacactaa
      541 tcctctggca tacccaatct tcaccctggg ctgaatatta gattcttcca tggtatattg
      601 cattaccact ataaccttag caaaaatgat gaacttaact acacttgagg caatatagct
      661 ggtctgattt gattttcttc tattgggttg actatgaggg aattacttat ttactaagat
      721 aaagcaaaaa tatagtttct tattgccttc tgaatgccta aattggtaaa tatttatgtg
      781 catcttttaa ttcattctga ggacctagaa tatttataaa tatatattta ttcctggttg
      841 c
//
LOCUS       KCKM01001797             945 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28308apa ultra-conserved element locus
            uce-6020, sequence.
ACCESSION   KCKM01001797
VERSION     KCKM01001797.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 945)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 945)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..945
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28308apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>945
                     /note="ultra-conserved element locus uce-6020"
BASE COUNT          301 a          169 c          174 g          301 t
ORIGIN      
        1 tgaaacttat tattgttaat gagaattata aaacaaagcc tctgggcact ggaatgagaa
       61 atacaccata aaatgcttat ctgaatccct acatagctat ttgactttca caacattttt
      121 gaaaggataa atacttaatc tagcaagtta tttccagtta agtcttgaaa tatctaactg
      181 ttgcaggtgc ctcatagata attaagtagc ttagtgtgat acagtaaaaa ataatgaaat
      241 ttttaaaaag gcgataggaa aaaatttccc acaacaccaa cagtgtattt tgcacttacc
      301 cacaggagac atctcaggga ctccagcagt gtaaggacca tccagaaatt ttggctcatt
      361 gtcattgata tcctgaatct taatgacgaa ctcagattct ggttccacgg gtttattagt
      421 cagtctgtct agtgcttgtg ctcggagagt gtagtaggcc tgctcttctc gatccagcct
      481 ttttgtagca tgaatatccc ctgtgttctc atcaataatg aaaatggaac ttgccccttc
      541 gcctgacaag atgtatttga tggagccatc tcctttatca acatcagagt gaagctggtg
      601 aaaaattgat gagagatgag attaatttac aagagagtca gtggcatgga gatatgtaaa
      661 aataattctt atgtcaagca gtagtacatg aaattttatt gttcttggga agataagccg
      721 aatgtttatc atgcaaggca tgtgagggac cattagaatc tgtcagcttg ctcttttgag
      781 caaggtaatt ttactgtttc ttgaaaagat tctcattttc aaatgcatgt gatattgtct
      841 tacagtcttc tcataccaga gttttacaca accacaaaca tacacacata aaacagtgac
      901 gttattcctg cctgaattta actacattat gtttcagttt attac
//
LOCUS       KCKM01001798             888 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28323apa ultra-conserved element locus
            uce-2591, sequence.
ACCESSION   KCKM01001798
VERSION     KCKM01001798.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 888)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 888)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..888
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28323apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>888
                     /note="ultra-conserved element locus uce-2591"
BASE COUNT          273 a          182 c          154 g          279 t
ORIGIN      
        1 cacgccaccc tagtgcttcc ctgctactaa accaggtcct gagaaacagg tagagtaact
       61 cctggtaatg tttttcaaag aactactttg catgcataac cacatttgaa atattttgat
      121 ctgcttcttg gaattaatgc attttattac ttgcaggtag atccaacacc tcacaagttg
      181 agtcattaag aagcaggagg caaaaataaa gaagaaattc ttcactgtgt gccatcatta
      241 tactgtcttt ctactggttt cagaaagaag atgaaggggt gtaatggtta atctattgtt
      301 tattcaaaac caccaactga agttaataga cagttataaa ctaattgagt gcgtctgtag
      361 tgctatctcc tcattcatct cgtttattca atttagctct cttagtgttc catatggtac
      421 agtgcccctg ctgctaggaa cagtcattca ttgcaagaaa aaccctgtaa caacaggaag
      481 ctaatagttt aactgttcct ctaaatttgt ttgacaaaac tgacatttag tacgccatgt
      541 cacgttgtca gtaatctgca atttaccctt aggcaggcag tggatgctca ttttatttac
      601 ctctcgtagt taaaagcgta attaatattc cactctgaaa caaagattag agatttgaca
      661 aacattgcaa tttaaattct ccattatagc aaacaaaaca tctttcacac accccattgc
      721 ataaaggaca cgtgtagctg taatttaact ttttagtttt taataccaca aactaatttc
      781 tgctgtcagc ttaatgaggc ggaaaacaca aatcttgttg ctctctgtgt gcacaggctg
      841 ggacagttag actgcagaga gcttgagtca gcttgctcca caatctct
//
LOCUS       KCKM01001799             671 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28338apa ultra-conserved element locus
            uce-3597, sequence.
ACCESSION   KCKM01001799
VERSION     KCKM01001799.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 671)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 671)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..671
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28338apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>671
                     /note="ultra-conserved element locus uce-3597"
BASE COUNT          202 a          129 c          112 g          228 t
ORIGIN      
        1 acacggtgct attgccctga taaaacctca actgattgta tgcatgtagg attcagttag
       61 accaacatct tgccccccca aactggatcc atttctgatg caaaatgtca gcacgtacac
      121 cttgtctgac tccaggaact aaaggaaagc tcctcttcct tgtacctgtg ctctgagcaa
      181 acctgcgaat cttttcctgc catgtttaac acacaaacac acaatattgc atatacaaaa
      241 cttcctgcaa tacatctcag tgagtccacc tagtttacaa ctcagaaatt gtttgtgaaa
      301 catttgtctg tacacatttt atattttgta catttttgat gtaacatatc atgtaaatag
      361 acagaaacag tgaaataaat catctgaaaa gttttgtagt ctttgtaaag ccctaataat
      421 aagtatttgg tgtcatcgga cttaactgga tgatgtattt tctattggtt tattgttcct
      481 ctagcttgta aaccagcttg cgtatatttt tttgcaggtg tgcgcactgt atctgtctaa
      541 attattactt tgccattaaa gtggaattat ttattgaaaa cacagtctgg tgtttttgca
      601 gtcaggacca cttaacagtt agttattatt tcaaatatga aaacaaaatg ttaaactgaa
      661 ggatgtggtt t
//
LOCUS       KCKM01001800             644 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28353apa ultra-conserved element locus
            uce-7695, sequence.
ACCESSION   KCKM01001800
VERSION     KCKM01001800.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 644)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 644)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..644
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28353apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>644
                     /note="ultra-conserved element locus uce-7695"
BASE COUNT          202 a          117 c          144 g          181 t
ORIGIN      
        1 atgaaaagaa agacaggtga gagctcttaa tccagttttt gacatgatct tcctcttccc
       61 cagcccaaaa gagtatccag aattgtcccc aaactgcaag cacgtgcaat aaaaaaaaat
      121 aaacaaaaag acgtttgcca tggctaagga atgtggcttt ttggaagact tttagatagc
      181 tggtcaacat gttagaagaa gtctgtctac agggggtttt gttaacaggt attggtaagt
      241 agtactagta taaacccgtt taataatgtg tagtgtgttg catggttacc tttaaacatg
      301 gattcaaatc gagtgaaatg tagccagtta aggcagcttg gttccttgcc atggcaaaat
      361 aacgagcaga tcccagcagt tgacgtcgca tttgtaaagc tgctttgtcg tgaagtaatg
      421 aagcagttgg agagagattc gcctgtttta aaggaactga ctaacacaag tatcccgtct
      481 atatctgaat gctgtctcta ggtgtaagcc gtggtttcgc cttcgtggag ttttatcact
      541 ttcaagatgc taccagctgg atggaagcca atcaggttgc ttcactcacc aagtctagat
      601 attcctgaaa atggaacaag tctgtacagt ttaaaaaaaa aaaa
//
LOCUS       KCKM01001801             999 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28369apa ultra-conserved element locus
            uce-3903, sequence.
ACCESSION   KCKM01001801
VERSION     KCKM01001801.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 999)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 999)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..999
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28369apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>999
                     /note="ultra-conserved element locus uce-3903"
BASE COUNT          276 a          238 c          213 g          272 t
ORIGIN      
        1 tcaagcttgc tgtccattaa aaaagcagct gaattggatt atctagcttg ccacagaggt
       61 attctcataa aggatctggt aggttttccc ctattcataa tagaggaaga gccactgtgc
      121 ccttgattat ttgagtttct gaatggaaaa aataaataaa cggagaagta tgaattgggg
      181 gaggagttaa atctttctcc cactccctta cgcttggttt aaaacctgcc agcccctctg
      241 agtaattcat taatcataca aacattgact cgactttttg gacagagaaa gtattaaatg
      301 cttagcttaa aaagtaaaaa caaaatcccg tagcccacca aaggaggaca tctgtttcta
      361 acttcagctt tttatttttt tatctttcat ttttttttgt tggtaaatct cccagacaac
      421 agcagttctg tagagagttt aaatatgaag gaatggcagg acgggctaag ggcacttcta
      481 ccgaacatta acatcaactt tggtggactg cccaatgctt cttccccctc caacgccaac
      541 cacagtgtac caacgtccaa cactgccacc accgacagcc tgaattggga cagccctggc
      601 agctggatgg accccgcaat catcacaggt aaccgtttct cactccttca gctccgctgg
      661 caaaccatca aatgggtatt tggcacaaac tgatttacat ctggcaaaaa aataaaaagt
      721 cagtatgcgg tggtctcttc cagcttccat ccacaaaacc tcaagggtcc aggaattttt
      781 gtggaaccgc taggtgcgac ccagtgtcgc tcagaccttt gcaatgcatg cctgggaccc
      841 ctgcaggcag tgaggtggat cagcgcttac ctgtagggtc aacgtaggtg tcccttctgc
      901 tggatggcat gtccggtatg tgcgccgctg gtcctgaggc actgaaggca ttcactggac
      961 ttcgttattt aaaaagggac gtactccact tgtttataa
//
LOCUS       KCKM01001802            1097 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28385apa ultra-conserved element locus
            uce-2975, sequence.
ACCESSION   KCKM01001802
VERSION     KCKM01001802.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1097)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1097)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1097
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28385apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1097
                     /note="ultra-conserved element locus uce-2975"
BASE COUNT          309 a          246 c          230 g          312 t
ORIGIN      
        1 caaactgggg cagaatgtgg tctcccctct gcttgtttga caataaagca ctatgtacat
       61 ctgtagtctc ttataaataa tgactggttc taatgatcat atataaacta tatgaaacgt
      121 acacctacac taccatgcag atagtggctt gtatcaataa ttatgcataa aatatacaca
      181 cacgtagaag gttgtacgtt atgcagaatg tattttctgc cagcaacatt gactaaaaat
      241 gcaaaccacc tgtatcattc ccttctcttc cctttcctct tcctctggcc atgagcaagg
      301 gctcagggtc tgccataacg gtccatatcc tagcagggtt ctttgggttt ttgctccttc
      361 tgtgcactcc tcacttggct gctgttccat ctgactctga aagaagcaag tacaaattaa
      421 agaaagaatg cagccttaac gcctacaccc agaagctttc aaaacagaag gctgctacac
      481 ctgtggggat agaacaagtg tatcagtgtc ctgggctctg ccccggctcg tccgcctttg
      541 ttagctggaa tgtgccgatg aaacaatcag gtgcagtagg cgcgtggcag cctgtttaaa
      601 aaccgattct tcggagacag ggagtgggct gtgaatcatg catccacata atctgacgat
      661 aacaatttta aatgtggtga ttagtgtata atggaaagta ttgtgctatt tggtatgatt
      721 tgtctgccac tgaactaccc agtatttaaa aggtcccatc ttctatgcaa atccagattc
      781 attccagtag taaatgcaca aggtaacttt aggattgttt agttgcttat agctgcctca
      841 ctcatgcagc ccatgcatgt actgtatatg caccctaaaa ccatggctgt gctgctgtgc
      901 tgcacacaaa gtggaatacc ttactgtgga gcttacagac tcagttgtga aatctttaat
      961 tgtgggcaaa accagccttc tagcagtgtg agtgcatcta gtagcacaga agtgcttctg
     1021 agaataccag cccagaaatc agaatgcatc tagatctata aatagggcca gtgagacaca
     1081 acttcatgac tggtcct
//
LOCUS       KCKM01001803             947 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28400apa ultra-conserved element locus
            uce-2012, sequence.
ACCESSION   KCKM01001803
VERSION     KCKM01001803.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 947)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 947)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..947
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28400apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>947
                     /note="ultra-conserved element locus uce-2012"
BASE COUNT          300 a          153 c          166 g          328 t
ORIGIN      
        1 gataatttcc cctgctcaaa cttttaaata ataaataact aaatattcat ttggtgtcat
       61 aaacattaga gttgttctgt ttaacaatac gaaatattta atgtagaccc tttcatgctt
      121 tcctatgtag cacattcctt ttttagtaaa attgggaagg gagggagaca aattgcagta
      181 ataagtgtct gaaaggtgtg taaaacatac agcaaataaa gcaattttcc agtgagtctg
      241 tgatattgcc atttccctta gcactgttga gtctccttca taatggaagt tgctgagggc
      301 ttagagtact agaaaatata aaatacctat gggacatatt ccagtactgt acattaaatt
      361 tgaggatttt acatgtgata aagtatgtca gtgttgctta cagggaattc cagtgatacc
      421 tcagctttct tggacttatt ataaatcctt tgttggaatt attgcggctg gttcaataat
      481 tcagattagc cctcatgttt attaatgcac tacatctgtg caaacaacat gtcaagcaga
      541 gagtttattg taattgcctg agcaaacaga acctgaaaga agcaatttcc agttacaatg
      601 tgctatgaca agtaatgagg taattggcat tctgtcctga ttacttccac cttccttttc
      661 atcaggtcta tattgtgtgt gatagatagt tttataagaa atgaaggtgt ttgataatat
      721 ggtctgctgc tgcttaaggt tagtgattaa agacaatcat aattttctct cagagatctt
      781 attagcttta acattattta ttcatatgtg taagatgttg gccccaaatc tctctttcag
      841 tactatacat gtacttaaaa tgtaaactca actacaatcc tattgaatgc aaaatatctt
      901 tgagatttcg aagctcatac aacacgtcaa ctttttgtga tgaaata
//
LOCUS       KCKM01001804            1057 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28415apa ultra-conserved element locus
            uce-7740, sequence.
ACCESSION   KCKM01001804
VERSION     KCKM01001804.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1057)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1057)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1057
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28415apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1057
                     /note="ultra-conserved element locus uce-7740"
BASE COUNT          333 a          172 c          186 g          366 t
ORIGIN      
        1 tatttgtgtt agatatcaga ggtttaatct gcacttacag atttttttca aagcgcaatt
       61 gcaaattaag caggaaggat tgaagtaatc tggtcagctg gaactcaagt ctttattaaa
      121 atgacaccat tcttcatggc acaatatgct ggttagaaaa tctgactgaa agttgaactg
      181 gtgctttgtc tctagaagct ttgctgaaag aacagcatat aaaaatactg atttttagag
      241 gccacgtaat gaaaaattta atacatgtga agatttttca caggaaatct aggaagaaaa
      301 aagttacatg gctaattcat tgtatatgat taatcatgaa gtggtatgtc ctgtacatta
      361 gaggtaaatt tcttcagaag aaaatgcaca gtttctgtca gacagaagca ccggtttata
      421 ttatttaact attacaaatc taatgaatat gtctttattt ctttctcggg ccttctgatg
      481 tctattcttc aattctctca tctctgatct tcaacctttg acctcacctg cctgatcaga
      541 tggtgtttcc taaaatcaat catgggtttc tctctgctga tcagcagctc attaaacgcc
      601 gcctcattaa ggtagtgctt catcttactg gagtctggtt cttctttaca ttcaatttac
      661 tctttgctgt acttttttgt cacatgcctt cttatagcaa gttgttcatt tgaaaatgtt
      721 ttggaatgaa gcagctgtta atgatatcaa caattaaaag gctatgggta tctttgctgc
      781 atgatccatg agtaagatgc agtcaactct tttcagtggt tggcagttat gtgctggaaa
      841 ttaaataact tgaccacaat ttttggtgtc ttttaaaaaa agggaaagta atatgttttg
      901 tcaactctct ggaaaattga catttgcaaa ttaataggta aaaatcatta agagagttag
      961 ttaaattgtc actataaaac agttccccaa aacagatgaa aaattatata aagcttcaag
     1021 gaaaagcagt tattttccat gctcattttt gaaatca
//
LOCUS       KCKM01001805             905 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28431apa ultra-conserved element locus
            uce-6956, sequence.
ACCESSION   KCKM01001805
VERSION     KCKM01001805.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 905)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 905)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..905
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28431apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>905
                     /note="ultra-conserved element locus uce-6956"
BASE COUNT          275 a          146 c          159 g          325 t
ORIGIN      
        1 agatcctgca aaaatggggt caatgtcatt ttaatatggt ttttgtgtct tcaagaaaaa
       61 aaaaaagtaa cttctggtat cagttgcatg acagttgata tttaactttt tggcctttaa
      121 gaaattatag tttgacatta agtttaactt tcctggctaa tgaaattatc atgatggaat
      181 agcccaagta aataataaat acaataactc ttctttgctt gttgtgtgct tttactattc
      241 ataattttta gggccatagt tattagatac acttacgtaa gacttaacga acagtaatta
      301 tcttttggct aaagaaaaag cccaaacgaa tgctaagctg cattatcgct tggcttctga
      361 catgagctga taatcagatt ttcttgctta aatccgtggt gcttgaacaa tgctacccac
      421 tgtctgtcct tcccgatatt acccttaatt agaaagaaca gaaacacaaa tctgaattat
      481 ttcaaaatct ggtttccatg gtcagtggtt ggaagggctt aactttatta caaataaacc
      541 tggctttatt tactaatgaa atctgaaatg ctaggcctgt aatagtagat agtctaatag
      601 tatggtgttt acatgcagaa aaatcttgtg tgggcaaagt attttgtaat aaatcgttaa
      661 gtaattgaat tatgattctt ttatccaatt aataaagcag aagaggagac ctataggaag
      721 ccctatgcca tagtttaggg caagcagtga cacattgttc tctagtcttg ttctttgtat
      781 gtaagacttt atgcatttgg tgaccgtttc tgtctctcca tacatttgag actttgattt
      841 gctttttttc ctaatccttt atgtttattg gttccttctt tctgagaact ttacacagtg
      901 cacag
//
LOCUS       KCKM01001806             777 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28447apa ultra-conserved element locus
            uce-4384, sequence.
ACCESSION   KCKM01001806
VERSION     KCKM01001806.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 777)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 777)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..777
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28447apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>777
                     /note="ultra-conserved element locus uce-4384"
BASE COUNT          279 a           96 c          137 g          265 t
ORIGIN      
        1 acagcatgca tgtacttaac ctttagatta taaaacattc aaatttgcat taagcaacaa
       61 tataaataag tttcagatac tgaaaagcag agagggatag gtacatggag taacttctac
      121 ttaaaaaaaa tgcgggatat ttgtaagtga aaaagcatca aatgtgcttt aattttaggg
      181 cagaagtgct aaatatttgg agcgattcca ttgtaatgtg tacaactgat gaagtcagtt
      241 ttctgatttt ccttgctagt tatttagttc tgaatctgtc attatttgtc taagcacagc
      301 tgaccaagca aaactgtgtt ttaaagtggc tttatgtttt gataaatgtg atctggttga
      361 aaagtatttt ccactgaatg cagagcttaa tagaacatgc tgacataata gttttaatgc
      421 attttgttga aaatgtgtga acaaccagaa tagcttttgt tccttcataa ttggctgtaa
      481 aagtagatgg aaacataacc attacatatg gaaatgtgtg aagagaaaga aataacattt
      541 ctgttgaata tattaggaat tgcatttcct agtttaaaat aagcatctga aatggatgca
      601 tcttttgaaa ttggttgtca aaataaaaag ccttaagtgg aatgtttgtc atattatttt
      661 tatcctgaat taaacaacac agttgctaaa ggaaagcata caactttaat aaatttaatt
      721 ttaatatttt tttttttgct cactaagcag aaaaatactt gtaaaagcag ttaaaag
//
LOCUS       KCKM01001807             521 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28463apa ultra-conserved element locus
            uce-6397, sequence.
ACCESSION   KCKM01001807
VERSION     KCKM01001807.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 521)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 521)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..521
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28463apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>521
                     /note="ultra-conserved element locus uce-6397"
BASE COUNT          177 a           80 c          112 g          152 t
ORIGIN      
        1 atgggcaaat caagtacatt tgtaacatat tttcagactg atgcactgga ttctcagggc
       61 aagctagaag agaattatct tttaatacag agttgcttta aacgtgaacg aggcaattgt
      121 cacaaaagtc tcttatttgc tgcttttctg gtctacacgt gtgcacacag agacacacag
      181 ggggaaaaat cagcctgttg tcttgcaagt gttacttatc atattaatta aaatctggtg
      241 acacgataac actagcagct gtgtgggaaa gcgagggaaa ttaacaaacg tttgatttgt
      301 tgtgttgcta atgtgacact tattatacag gtcacagtaa aacaatacct cagccaaaat
      361 atgctaatac tggtggagaa ctgttgcagt tgtaaaaaca ttggtgttta ttataatgag
      421 gcgaaatagc acattacctt tagcagggtg aatcgctgtt tctcagggca agagtaaagt
      481 atatctgaag atttaattaa aaaaaaatat gtagaagaag a
//
LOCUS       KCKM01001808             852 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28478apa ultra-conserved element locus
            uce-2575, sequence.
ACCESSION   KCKM01001808
VERSION     KCKM01001808.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 852)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 852)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..852
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28478apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>852
                     /note="ultra-conserved element locus uce-2575"
BASE COUNT          213 a          208 c          190 g          241 t
ORIGIN      
        1 gaagctcgag tttaacaaaa tgacactcta tcaggctttt aggtgcttta ctgccaggct
       61 cagcgaggtt tcaagcctcc tctcccatca gcctgaacat ttccatccca gaatttgtga
      121 cctctccatc ccttctctgg tccctgccct ctgataaatg caaacccgct gcatcccttg
      181 cacttctgca tctatggaga gagaggaagg aaaagcaaca caagccacca ccaccaccac
      241 attatccctg cgtggtttgt ttggagtcgc ggatctgttt gcaaatgagc ttgggggctc
      301 gccgggtggg cacgcttgct aaatcctgtt tcacttcacc aatgagctga gaaactctcg
      361 gataatgggt tatgagttgt agatctgttt gattgcattg ttgcaaagtg ggaattgttt
      421 tgcaacatag attcttaatc actgaggcat ctgtgattga atgcgtcgaa aattggttga
      481 aattgaaagt taactatact gcagacggct tattcttgtg tataattgaa aataaattct
      541 aataactctt cttgaaaagg gctgccagga ggaaatttcc aaccttgtcc tctcctcagc
      601 ccctctctct aaacccgcaa atcctccccc tctcccctct ggtccttttc ttctccatcc
      661 tctggagctg ggaaataaaa tccaatctct gcatgtcact acctgcatcg tcagctgtaa
      721 aatatgtaac ttggaaatag ttcttgtcgt aaggcctgag gatgggagct gtagaggaag
      781 ctggtgcttg gttttgcagc gtaaaattgc actgtagagg tgcaagaggc aaacgccggc
      841 aaagggggca tc
//
LOCUS       KCKM01001809             930 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28494apa ultra-conserved element locus
            uce-4110, sequence.
ACCESSION   KCKM01001809
VERSION     KCKM01001809.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 930)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 930)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..930
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28494apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>930
                     /note="ultra-conserved element locus uce-4110"
BASE COUNT          313 a          195 c          166 g          256 t
ORIGIN      
        1 ttctgaataa aaacagtaga aaagtttgat cagtgacaac caataccaac accaagtcag
       61 cctcctctat aacttcagca ctagctccaa cacagtcctc aagaccagag gatgaataca
      121 gttttcacac catacaaaca gctgctgttc agaaagatgc gaggaagcca gcctttcacg
      181 ggtatgttca cactcccaca gacatgtcac ccctcatcct gttcctcagt ggttcaattg
      241 accgtagctg aatgtacatt atgtcaataa aattctacac atatcatcga ttttatctgt
      301 ttcacggaca caatgaaaag ggagcttaaa aaatggggga aggggtgact gagaaaagta
      361 attctctttc caatctgagg aaactttaga caaatttgcc tttgataatc gactgaacaa
      421 gctgcactgc gagcatcaag ggatggtgca ggaatatcta gcaggtgctg cagtttatca
      481 caaaaccgtc taaaataatt ggaagtgaca accagcacta ccacaaatga tttattagtc
      541 tttcactcag cttttcagct tcctcagggc cagaataaat aatttaccaa ctctgtatct
      601 tccaatcatt aattcttccc tgtgcatcca aactacattt aactctgctg ggttcagtgg
      661 aattaaaaac acaatatgaa gactttttcc cccccaagta tagtattatc cgactatatc
      721 taaaagtaaa attgtcaatc aaaatttcta tcagtgatag aaggattaga gctagcaact
      781 aatgctcagt tacaaaatat ctgcagaata aaatgaaagt taaactgaag agatatcaac
      841 aatgaaatgc tcccaggggg ttaggcatgt tctcaaggta taaagtactg gtagtgtctg
      901 aagatattga ttagcattgt ttttctggtc
//
LOCUS       KCKM01001810             983 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28507apa ultra-conserved element locus
            uce-8030, sequence.
ACCESSION   KCKM01001810
VERSION     KCKM01001810.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 983)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 983)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..983
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28507apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>983
                     /note="ultra-conserved element locus uce-8030"
BASE COUNT          271 a          202 c          206 g          304 t
ORIGIN      
        1 ggagcagagc accacgtgag tgagaccagg atgcgtcctc caggctagca ctgtgacagc
       61 ctccgcgtca gcacgcgtga ggaagcccag gcaagtgact gtaaatgagc cactctttca
      121 aaagcagaga tatttaggaa gatgcgtttc tcatcttgta ataaaaatta aatacaaatt
      181 ctcctaaatg ctaactgcct gactttaaca aggcccagaa tgcacctttc cctttccact
      241 ccacccttca catgacacaa acacgaagtt ctcaaattga tggtgtttat gtttgaaaca
      301 tttttctgat gtctggctct gtcaagacta attttagcat ttctaaagct gggtaaaaat
      361 atagcctcat tactttgatg tcagagtata gtttactatt agtatattct ggggtttatc
      421 attttagtca tgtttaacac ggctgcagca ggcatgcact attaaatctg gcttacttta
      481 cattcctgtc cgagattatt tatttggaac aatttcctct ctatcaaaag acacagctaa
      541 tgctgagttt taatgtgtta tttacacaca aaataaccta tttacaactc agtatctgcc
      601 gcagggagaa tgaatggggc agtgctccct tcatcctgtt gtatctgagt ttaacaatct
      661 ggattgctaa tagaaccatt tatcacaggg tggtaattta ttttatgtta gctgcacagg
      721 tctccctgcc tctgatctat ggaaatactt tgtatataat gaagttcaac aagtcatttg
      781 gtgtaaacag ggggaaccaa gctgcagaac cagtaagact ctggctacac ttatttttcc
      841 gggaggtaac gactctcctc taatattaag gctccggttg atgaaataca gctcttttgc
      901 cctgcatgtg ctgtcagggc agagtgtggg gttttctgca gcggatgaga gattgggctg
      961 gagtttgatc acttgattta tgg
//
LOCUS       KCKM01001811             908 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28523apa ultra-conserved element locus
            uce-2276, sequence.
ACCESSION   KCKM01001811
VERSION     KCKM01001811.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 908)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 908)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..908
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28523apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>908
                     /note="ultra-conserved element locus uce-2276"
BASE COUNT          213 a          233 c          264 g          198 t
ORIGIN      
        1 cttgttctct cccagcccag agcaccaagc agccatcgtt ggggtgtgat ctcccccagc
       61 acttcttgct ggtgctcaag ggctctgggg aagaggggcc tggcagccac ggactctctg
      121 gctggcagcg atgccatctg gcgcttgcaa gcagggccgg gagcagagcg cagctctcaa
      181 gctgaggaga ggtgcccggc tgctcttggg cacagggtgt caaaggggag ggacaggaac
      241 cactcagcaa agccgcagta aatggctgtt caggacatta gtgtgctcct taagttaatg
      301 agaagcaagc gctgccagaa gaaaacatct cttatctgct ttagagccac agtgcatcgg
      361 cttcagcata aaatttacag agcttgaaaa tggggcataa acattatggg taaatttggc
      421 agaaaatgtg actgactctt atctggtcat gaataaataa ttttcaatta ccagcccagg
      481 cgctgctatt atcctgtaca gggaactcct ctgaagtttg ttttgtgctg gagcacacac
      541 agccctgtag catgtgggtg gcaggagggg actgctctcc ccaaggtgtg ggctcggaca
      601 tgggcacgtg ccgtgctgct cccctgaaac atcccctgcc aaccacaccg agggcagccc
      661 agcaagcagc tgtccccagc gtttgcagga agccattctg ccctctgctc cttcagagag
      721 gggtcacgcc atccccaagc caggcaaggc aaactcaggt ggccagagat gcagcggcct
      781 cacgcttgtg aggacaggat cagtttagct gtgaaataag ggttgtgacc tctgagttgt
      841 tcgctctgca gctagtcagt gtaaaataac gggctgctct tgctgagcga ggaagagatg
      901 tgtttgga
//
LOCUS       KCKM01001812             433 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28539apa ultra-conserved element locus
            uce-8006, sequence.
ACCESSION   KCKM01001812
VERSION     KCKM01001812.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 433)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 433)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28539apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>433
                     /note="ultra-conserved element locus uce-8006"
BASE COUNT          146 a           76 c           61 g          150 t
ORIGIN      
        1 tttttgttca gattaaatat catttacatt gcatcctttt tttttatttc gtcggagaca
       61 taaggtcaga attgattgaa tatgtactac ctgcatataa tgatttccag ttttttacaa
      121 tcatgcgcta atgctgcaca gtaatggcct atggatgaag agacagatgt agtaccagtc
      181 attcgctaca catttgcatt aacaaatcat catttaattg aagcccatcc aacaagttta
      241 tgctacttaa ataaagttcc tttcaataaa agatgccaca atgacacatg gttcttaact
      301 gcaaggtaaa taaaaagtag tatttatttt cttgtcactg gtttaggtaa gtattaaaat
      361 gtacacctat taatttgtat tttgctcaaa ataaaccacc tgacatctaa cataacaatc
      421 caagctagta cta
//
LOCUS       KCKM01001813            1007 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28555apa ultra-conserved element locus
            uce-15, sequence.
ACCESSION   KCKM01001813
VERSION     KCKM01001813.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1007)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1007)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1007
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28555apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1007
                     /note="ultra-conserved element locus uce-15"
BASE COUNT          317 a          195 c          180 g          315 t
ORIGIN      
        1 tcagctgctg aaacctgctg ttttaaaggc attagagttg aacatctagt gacagcactt
       61 gggttattta tcattatgta tcaccccgct acactatatt ttattattct ggatttaaag
      121 gaagataaca caattatggt taatttgctt ctcttcttta tatatatagt gtcatgaccc
      181 accacggctt tgtcccatga gatattttta accaaaaaga aatccacaag aaactctccc
      241 taaaaattcc attaataacc tcttgtagcg tgtataggtt gcagggtctg gaactaagaa
      301 tgttttaatc tcttcagcaa aacaatgtct cataatgatg tacaggacta ttgccgcact
      361 gatgaagaat catacataat tcagcacctt tcacttggca ccactgtgat atcctcatta
      421 gcagtggctc acagtggctg tcagatggtg tccatgcgaa tgcaggcatt atattgtctt
      481 tgagatgtgc agctgcttcc atgacactgc cagtatataa aaacatgacg ccagtttgtt
      541 ttatttagtg ctaaaccttc cagtttgtaa aaacaaggct gacacagagc ctgacatgag
      601 gcagtgaaaa taattagctc tcattttctc agcctcctat ttccttctcc ccgctgtgtt
      661 ctctttccac taaaccacca catgtcagtc gaaatgggag gcaattagtg ggctcatttc
      721 agtccccaca actgtgctga aaagaaagta tttatgatgg cacaatgaac agctgaaaga
      781 ttaaataaca tttgcctttt gaaaagaaaa tgacttctag ctaaatgggc aatttttgat
      841 tattctcaaa caagcttaga gtagttggtt tttaaaatac aagaaaggaa aatgagtcat
      901 ttttaggtga aagaatcaaa taaaacttga cacagtaatg caaataactg atgttttatt
      961 gcaaaatatg taaatgtgtt atacccttaa caatggctgg tgtctca
//
LOCUS       KCKM01001814             959 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28571apa ultra-conserved element locus
            uce-6183, sequence.
ACCESSION   KCKM01001814
VERSION     KCKM01001814.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 959)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 959)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..959
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28571apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>959
                     /note="ultra-conserved element locus uce-6183"
BASE COUNT          268 a          186 c          161 g          344 t
ORIGIN      
        1 gcagtagtgg tgctgcgcct gaggacaacc agagcaatga accatttgaa acgtctgaac
       61 ttggttatcc aacgtctcaa aacccacaaa ctcttcactt tgcaaactat gatcagaatt
      121 tatcagtgaa atgtttcttg ttttccccta ccaaaaccac accatccact tttctgcaca
      181 tatcaaaagt atgcaggagt gttctctcag atggttgaat tatttattaa taggtttatt
      241 ctgtgtggta gcagtttcct caaggattgt tagccttgcc tctttctttt aaactaatat
      301 ttgtgcatgt ttgtgtgtgt gctggtgcct gtcatgtttt ctgactctac aatgtttatt
      361 atgctttaga caaatacccc agggagatta tgtaaaaaag cctggagagg ccgactcttt
      421 ttatagcgac atgcctcctg gagtcagcac aaactctgca tctagttcta agaagaggtc
      481 tgcttttctg tcgcattttc agatttctac ctgttccatc acccattatt ccattagtca
      541 gaacatttca ttgttttgca gcaggtttga ttctttcttc tttctttgtg ggatgtttga
      601 aatagcatcc tttgtgcttt gattactgat ttttctcatg tgccctgagc tgctaattat
      661 ggcaaataaa aaacaagttt tgcactgtaa gccaattttc ggctaatcaa attttcatca
      721 tctccctgct tgagaattgt tttcaagtag aatgtaataa taatttctgg ctcaaaaaat
      781 aaataaaaca cccacaattt taaaatcatg atcatgtaat caaagaaaag gaacactgtc
      841 ttgcttcaat aatagttata aacattaact gttcaatata aatgttattt ttatctttaa
      901 ttgtcagtgt catgaatttt ctgaggtgac ctagacttct gaataatatt cttgctgtc
//
LOCUS       KCKM01001815            1005 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28587apa ultra-conserved element locus
            uce-5221, sequence.
ACCESSION   KCKM01001815
VERSION     KCKM01001815.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1005)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1005)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1005
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28587apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1005
                     /note="ultra-conserved element locus uce-5221"
BASE COUNT          302 a          211 c          160 g          332 t
ORIGIN      
        1 tatttaagtc cttatggttc ctctaccaag aaatgcctgg gcaatccata atatagctac
       61 tttacgagct gcataatgga aatacgcttt taaaagacca gcataccact gtttttatat
      121 ttcattacaa atcagaaggc tcacaacttt ttaatacgct tgtaaaatac aaggcttcca
      181 agaatagcat tctaaaagtg ctaggggtaa aaggaagaca aaaagtctcc tatatatcat
      241 aaatatgaat gagcagagac ctataacctt aacttgttta actgctgttg tcttctggta
      301 acaataaaga gaagtctggg tcttactgaa aattaaataa agaattgcgc tttttttttt
      361 gaaaaagcat ctttatgctg aatttgcaaa agtaaaacct gtgatcttga agcacagtta
      421 actaatgaaa gattatccta aatgaataaa agaaccttat ttcttatgcg ctcctttttg
      481 gatgccatgt catcacactt gtcctcttta cccagtttgt ctactgcctc cacagtgaag
      541 ctgtagttgt agttcccttt ctttcctctg tcttggctgt atcctttccc ccatttcagc
      601 tcgtcttcat tccttctcac aaacttgtca aactcatagt gagctctatg ctttctgcca
      661 tcatccaatc gatacctttg tctttcaggt tctttttctc ggtatcttct ctccaaatct
      721 ctttgttctt tgtcactatc attttgtgac ctatgaaaaa aggaagaaaa tccaagcaat
      781 taacagtaac aaaaaagctg ataaacgata caatacaaag ccttcctttg atttcaacag
      841 tatttagatc aatcgtaagg caaggccatt tttttctcat taaaaagggg ctacgtgcaa
      901 ttttgctgaa tgtctcatcc aggcatctgg cccttggcta ccattcagtt caacgtagca
      961 cacaaagctt tgcaagcaaa actggatttt gtgcaactgt ggtgg
//
LOCUS       KCKM01001816             412 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28603apa ultra-conserved element locus
            uce-2834, sequence.
ACCESSION   KCKM01001816
VERSION     KCKM01001816.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 412)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 412)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28603apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>412
                     /note="ultra-conserved element locus uce-2834"
BASE COUNT          176 a           68 c           80 g           88 t
ORIGIN      
        1 cattaaagaa aaattcagaa ttaaaaaatt gtcaaaggat acacatgcat cacactccca
       61 tacgcaactc atctatatga atgacacttc actgctgtga aatacagagg gaaaaagcat
      121 gcagatccat atttatttga gaatgctagt tgtgaagcaa cacatacaca attagagggt
      181 aacaaactca atccacagca gagtgcagaa aaaagaaagt acagtactaa ctctctgaga
      241 ggattcaatt ttcatcaagt acctttgaat gtcaagttct gaatgaaggg agatcaacat
      301 gcactgcaaa acctgtggat cagagagaga aaagaagggg aaggggaaaa caattgttaa
      361 catgaaaaga aaaaggagaa cagtagaatt taaaaaagaa taacctgcac at
//
LOCUS       KCKM01001817             233 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28619apa ultra-conserved element locus
            uce-785, sequence.
ACCESSION   KCKM01001817
VERSION     KCKM01001817.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 233)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 233)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28619apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>233
                     /note="ultra-conserved element locus uce-785"
BASE COUNT           75 a           43 c           25 g           90 t
ORIGIN      
        1 cttgtttata attgcttaaa cattttagtc ttaaaatttg ccttaagcct tcttttttta
       61 aaaaagaaag tagtaataat ctccctattt gcagtctctc gcctttcccc aagatgtaaa
      121 taaaccagca tataagtgca cttttaacac tgtagaaata aaaattaact cctctgtact
      181 attgttccag tacctagtat tggcttcctg attataaaat ctatttttat taa
//
LOCUS       KCKM01001818             938 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28633apa ultra-conserved element locus
            uce-2349, sequence.
ACCESSION   KCKM01001818
VERSION     KCKM01001818.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 938)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 938)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..938
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28633apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>938
                     /note="ultra-conserved element locus uce-2349"
BASE COUNT          268 a          164 c          173 g          333 t
ORIGIN      
        1 agatttgtgc taatgttttt gtcatttcca aaggtaatac atctaatcct gtcttttgtt
       61 attgctttac cctatggctg ctggagccac ttccaggtac tgaattagtc tgaattgaaa
      121 tacaggcaaa aaagcacagt agccacactg tatttatcat gaatttgaga aggaagaagt
      181 aactgcttca gcactgcctc ctttgcatac ttcgtatctc taaaagtagc cagttaatta
      241 cattccatgg ttactgctat tgtaacgtgt gcttgtttga agtgcaaaga taatcatcga
      301 ttgtacgctc ttgactacgc tattaatgat ttcaataccc acattgtgtt tacattttgc
      361 tttatagcta gcacttagcc attgtggttt taacatgtag taattcagtg aatactttct
      421 ccatgtaatg cccttgccat ttcattctgt gctattaagt gttgtttttc taggaagatc
      481 ttgaaatgtg gggcattatg tatgagttat gctaatttgt tagggcaatg aatacattaa
      541 tttcattagt aaatggcctc aaagcaataa ttaccagtgt aggtgcgtca gaaacgatca
      601 tgttcagttt tgccagttaa ttattaagat tttgttctaa gggacccaga tttgacatcc
      661 agcttctctt tagctataaa taaaagtctg aagtatattg ggctgaagaa atctagccaa
      721 gaacttgttt tgctcttaga aatttctaca ttttgtctaa ttgtgactgc tacaagatgc
      781 caaaataatt agtgtcagtg atatgaggtt tatactatac cttccaaaaa ggcacatgat
      841 aatgaaaata gcaatcgcac tttgtcattc ctcttgtctc gccttacgtt actgaatgct
      901 gaaatgttca gtggtagtgt tacttgctag cacagtat
//
LOCUS       KCKM01001819             614 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28648apa ultra-conserved element locus
            uce-5091, sequence.
ACCESSION   KCKM01001819
VERSION     KCKM01001819.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 614)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 614)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..614
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28648apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>614
                     /note="ultra-conserved element locus uce-5091"
BASE COUNT          170 a          137 c          121 g          186 t
ORIGIN      
        1 tttagtttgt ctatctgtga caaccctttt tatgcattta attcattctc aatttctcat
       61 aatcaggcga aaggtgtccc ctaaggttag gagagagctt gtcaaaaagg cagggtgaat
      121 ttgcagaggt aatcaccagt ctatctcctt tccccactgc ccgtggaact attaactaat
      181 atcactgtct aatctttttt gtacttattt atttttgcag cgagaaacta gtgttataaa
      241 cacccctact gtcaaaactt gtcatcctca ttacctcaag gcgggctcca tctcagttat
      301 tctaatttca tagtttctcg aatttacagc cgctggaaat tgagtacaaa atccattatc
      361 atttgtatat tttaattatg caaatgaggc agctcagctg ctctggccgg gacctgcagg
      421 gatgcctaac ttcagtctgg gtgattacaa tttatccagt cgagtcactt taattgtaac
      481 aagctaatta cattgttcca tttggcttta acaaaagaaa aggagacaga agatgcttca
      541 cggcaaaagc ccggcactaa catcgcatct ccccagcgat gatgacgagg gacggggcag
      601 aacggcggcc ctgg
//
LOCUS       KCKM01001820            1022 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28664apa ultra-conserved element locus
            uce-921, sequence.
ACCESSION   KCKM01001820
VERSION     KCKM01001820.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1022)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1022)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1022
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28664apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1022
                     /note="ultra-conserved element locus uce-921"
BASE COUNT          300 a          196 c          177 g          349 t
ORIGIN      
        1 gagttttctt tataagtggg tcagcattta ctcagcaaat gattagagca gatggtgtaa
       61 tttagaatct atgacaaaac ttttaataga tcagggctaa cacgatgaca aggagctctg
      121 tgctgttctc cattcctgat ttcttctttg ccttggggta aaaatcaggc atgggattgg
      181 attttctagt ctgcacattc catctgagca agttgaacca cttgtttgaa catccttgta
      241 agaggaatcc ccacacttct ctactcctgt atcattattg ttattgtttt caaatacaat
      301 aattaactga gagtggcaga aagctaccaa acaggtagac acagtccctt tgaggagcag
      361 agcttttgaa ggaaaaagac atagtttgaa gaaagtaaca aaggctgcgt ttgtgtattt
      421 tgctccatgg agctgaaaat atctagtaaa ttgatcccgt gggagtaata aatacacatt
      481 actttatctt gtacttcatg tcctataccc ctgagccttg atagaacaac accacttaat
      541 agacttaaaa aaagagtaat tacagtcatt ggttgtgtga tatttcagcc cttccagccc
      601 tgcctgacct tctaatttag ctcaccgtgt ctaactaatg catttatatt catcttttat
      661 gaagcatgtg tagtacaaaa ttgactttgc agcctttagc aagctgtctt accaggttta
      721 ggatctggtt agtacagtgt tctgtatagc atatgtacat ttacctcaga atcttggatg
      781 catatggttc tgatcaactg ttacttttta tccttttgga aataaaataa aaaatattta
      841 ttccatttca ttctcccccc ccctttttaa agcttttatt cattgcaacc ttatttacag
      901 ctaaacatgc aggcagaaag atgcaggcat ttttgaaatg attaccacta atgtttctac
      961 ttgtcagaag tgcttaaatt ttcctgcact ttgtctaaaa acttagcact ttttaccttt
     1021 ta
//
LOCUS       KCKM01001821             768 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28680apa ultra-conserved element locus
            uce-6444, sequence.
ACCESSION   KCKM01001821
VERSION     KCKM01001821.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 768)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 768)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..768
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28680apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>768
                     /note="ultra-conserved element locus uce-6444"
BASE COUNT          261 a          140 c          138 g          229 t
ORIGIN      
        1 aggtccatag cacctggaat ctgtagaatt cctgagatta tcaccttcta accaaacgtg
       61 tcctttaggc acctatgatt acacaagatc aaaatataaa aagaaaatag aatggtatta
      121 agcatagatt gccttacaat gtattttctc atttcagtgt tctgtatttc atgactgaat
      181 aatgaactaa ttttttattg aacctagtaa gacacagtgc cagatttgga gggatgagga
      241 ggagtgctgc aaagtatctg ttctatcatg tgctcgaaaa ccaatggttt gcaacaaaaa
      301 atccaaaatg aagatgtaag aggttagacc aatgtgacag ggtcattaat ttaatagact
      361 tcaaaagagg tcattaggat gttgactgaa aatctgccct cctgtcgcag taacagcatg
      421 aacagggcag ccacacactc atcaacatcc tggggccagc accaaggcta gacctgttag
      481 tagattcatg atgaactaac tggtaattga ttgtgacatc aattacgaat aatctcatca
      541 ttttatcgga gtaggcttgt caaagttcta attaagatca cagttcattc tatgtgcagg
      601 cagaatccac aacacattat attgcagtaa tgatgatcac gaaacagcaa atcccttttt
      661 ataatttgaa aattaatgat ggtgaccttt tactatatga caaagacctt tcattgccta
      721 tatatattat gcattaacta tattacatac catagattca tggcattc
//
LOCUS       KCKM01001822             867 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28696apa ultra-conserved element locus
            uce-98, sequence.
ACCESSION   KCKM01001822
VERSION     KCKM01001822.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 867)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 867)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..867
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28696apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>867
                     /note="ultra-conserved element locus uce-98"
BASE COUNT          270 a          168 c          169 g          260 t
ORIGIN      
        1 gagagggggc aggggggaaa aggcgatata tgggagagaa aggattaagt tcatacaaaa
       61 tatatccaga gcattttaaa agctgaaaat aaaggctttt gagagataca ttttgggggc
      121 tgaaaggaga attgatacag aaagctaacc tgacatgatt ttaggggata tatctaaaaa
      181 gcctaatcat tgataattca caatttgtga gcctggtggg atttcatgca gagcactagc
      241 ctcactaagg taattggtgc tattgaaaca acactggctc agcagcacgc tgctttcttc
      301 ctcgcctctg ggcacaggaa ggatcaatat ttgttaggat tgcttcttgt tccaacaatg
      361 taagatttac aatacttgct aggattctca ctttgtcttc acacaactca tcagtggaac
      421 ccaattacta acctcagaca aacaacatta acatgagcct ctatgcttct ttattgccct
      481 tcatccaagt ctcatttcag ggtcttcagg cagtgccact ataacagata ctacacttta
      541 aagtgtgctc caaggaataa attttcagtc tttcattact cgtaccttga tttacttcat
      601 atcatcttgc cgctatagac aaagataaca cactgtaaat tacagccatc ctgtcttgta
      661 gtttcagagg tagggggaag gcagggagtg atgcttttgc gctacaatta gcaccaggca
      721 ccagagcttt gttgctatca tcaccagtaa ctgaaacttg ttttatcaaa gatgcaaacc
      781 tatttttttc ttataaactc atttcctaaa ttgctttata tttattttgc actctgataa
      841 atgagaaact atgcagtaag agaaata
//
LOCUS       KCKM01001823             642 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28712apa ultra-conserved element locus
            uce-3919, sequence.
ACCESSION   KCKM01001823
VERSION     KCKM01001823.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 642)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 642)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28712apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>642
                     /note="ultra-conserved element locus uce-3919"
BASE COUNT          212 a          121 c          117 g          192 t
ORIGIN      
        1 ttttggtcca aagcatggct agaaccagtt gattttgaga tatgtgcctt caggaagtgt
       61 attgaaataa cctgaagaac atttcttctg tttctactag taaaggaaaa gattcaagcc
      121 acatctgtaa cgctatattt ctgaacaagg tgtgcttgtt ctaccaagga tatgccaata
      181 attcaaggta atcagcaagg tatgttacag aggaaactct gaaccaacaa gctgtacaaa
      241 caaaatagca atcagaagat ttaatgcatt tctgatgtac atttaaggca ttgacactgg
      301 gccacagatg tacatgtgtt gtgttttatc tcgttgagat atggcctgtg agaacctatt
      361 atagcacatc atcacccaca agtactgggc ccagcaaagg aaaaattcca tcacacatta
      421 ctcctgcaga tatattagag aaacaaattg tacttggaat tgaaaagtca caggtttatt
      481 ctgtcttaat aaattcctgc caaaaggcta agtgtaaaac tagaaatact tcccaaatgt
      541 tgttactgca ttatcatctc tgacatctca agggctgctc aggggatcat ctagatatca
      601 tttcagagct ctaacaataa attcactttt ttttaacctg tg
//
LOCUS       KCKM01001824             565 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28728apa ultra-conserved element locus
            uce-7223, sequence.
ACCESSION   KCKM01001824
VERSION     KCKM01001824.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 565)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 565)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..565
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28728apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>565
                     /note="ultra-conserved element locus uce-7223"
BASE COUNT          192 a           98 c           89 g          186 t
ORIGIN      
        1 tccgataaat tttatttaaa tgtaaaaggt aataggcaga aaatgtagtt tgcttacaag
       61 tttcctttat ggttgtttga ctgtcacttt tctgcagatt tatgataatc attcttgcaa
      121 caaaaacgtt tacttcactg tctaaataat aaggcaattt gttacagcta attactcaag
      181 tgcttcctta atctcaatta aaagattcag gctgattttc tacatttctg cagcagtatg
      241 ttccagaata tctcgttaat gtattcccaa tcacatattt gttaaggaat gcatggtcca
      301 tgcaaaactg aaatgctaaa atacatagct gcaatcttaa acaatgattt attgtgacat
      361 gggatgtggg acatttccac agcttttgtg attgcagtaa tgaagctgta aaccaaatag
      421 catgaaatga agcaaggcct tacaatttaa tcagctcgta aacagatcta ctgcatcaag
      481 caaatgacat tattatccat ccgaagtaaa tcatgctaat ctcaggagat aaaatcaaca
      541 tcattaatgg tcacatgtca tattc
//
LOCUS       KCKM01001825             900 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28742apa ultra-conserved element locus
            uce-3407, sequence.
ACCESSION   KCKM01001825
VERSION     KCKM01001825.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 900)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 900)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..900
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28742apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>900
                     /note="ultra-conserved element locus uce-3407"
BASE COUNT          266 a          181 c          164 g          289 t
ORIGIN      
        1 ttttggtagc agcatgatct acaggccatg actaccccta cggtagctgg tatccgctgt
       61 ggtatctgga tctgcgagca ggaggagaac agtttggcat caataaggaa agtgcacaaa
      121 ctcttagaaa acactggaga tttgtttcgt tgcctgaaac atagttttca acctggaaac
      181 acttaatctc tgcagagccg tgtagttctc ccacagtgat ggataaagct ttgcagctgt
      241 tcaggttaat gctttcctgt ttgtccgctg acatttaaac tagaggatgc agagcattct
      301 tcaaagcttg attggcacat ggaagtaaaa catgtaatca gtgttaatct cctagtctat
      361 tactaccgcc tttcataatc tacacttact ttacaaaatt ctttagaaag aaatgctgtc
      421 agagcaaatg atgcatcaaa ttcaaacagg ccatcaagat tgctaatgga ttttaatagc
      481 agctattaca gcataatggt attttcccaa cagctgtttg tttataaaat tttcagttta
      541 caagaccttt atgtctaatc ccaagagaca tccctcaatt catttataat catttggttc
      601 agcctacaca taaatgctgt cttattcata ttgggtgtgt ttgtgtatgt gtctaagata
      661 tgagcaacca ccacagcaat gaaaatgaca gagaacctta caagctaaac taattagtgt
      721 gtatctttcg tctttaacag caaataagta ttctatatgt ttcttctctt ttcctagtct
      781 tgaatagctc attgcaatgc aaaacagctg tctggatcac agtctatttt atgtctcaaa
      841 ctgacctgat tatttgtttt agctacaccc atttcagccc ttgaagcaca gtgctaggag
//
LOCUS       KCKM01001826             526 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28757apa ultra-conserved element locus
            uce-2576, sequence.
ACCESSION   KCKM01001826
VERSION     KCKM01001826.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 526)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 526)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28757apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>526
                     /note="ultra-conserved element locus uce-2576"
BASE COUNT          173 a           97 c          126 g          130 t
ORIGIN      
        1 gctgcctaat ccctttaaat gtactgtata tcgcatttat gaaacgtatt ggtaccagaa
       61 agaagcagac gactttgttt ttaaacaaag accccaggat aaggggcaat gtttttcccc
      121 tcacaggtga tggagtacgt acaaagaatg cagtagataa tggcagtcct gtcctctgaa
      181 cagatggtga tggtcctgtt gctaggataa ggcctgaaga atttagtttt taattccaca
      241 ttatttgcct cagtgccatg aatatcccta ggtttcctca ggcaaaaaaa aaaaatacaa
      301 caaatacaca gaaagagaaa gagaagtgac atgcggatag aaaaggagac ggagcacggg
      361 aaaggactgg agccaggtca atagaagctt ttgggaaaat gtctgctcag ctgtctgcaa
      421 tcacctgggt caggcaggaa ggaagattgg tttggcatga gaacgaggcc tttgatgctt
      481 tagataccac agagaaaaaa tacgcatttc ttcccattag aagtct
//
LOCUS       KCKM01001827             788 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28771apa ultra-conserved element locus
            uce-6185, sequence.
ACCESSION   KCKM01001827
VERSION     KCKM01001827.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 788)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 788)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..788
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28771apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>788
                     /note="ultra-conserved element locus uce-6185"
BASE COUNT          269 a          146 c          201 g          172 t
ORIGIN      
        1 gtcagagtga ggagcccatg tggggtgata acattttttt aatcttattt ttttatttta
       61 ttattccctc tcttgtggtt ccctcctgct cctgaaatga acaggggttt ttattgctgg
      121 ggttaaaaaa cacaaatttg cattacatcc tggctcccgc tgtaatactt cagtcttgtt
      181 tctctctcgt cccctctcca gaacaactga tgctatcaca gcctgattta atttcaaaga
      241 cggattgtga tttggcagtc ggggggaaaa aaaaaaaagc caagctaatc aaaagtcacc
      301 atctgctgcg ttgccatggg gatattcctc cccaataaat gtgctctttg ccaaaatcac
      361 agataacagc actataaagg gtgggaggtg gaggggggaa tcaaagaaag aagttccgac
      421 actagggggg aaaaatgaaa gagagaaatg agggagaaac aagagacaga gaagaagtgg
      481 aagagaaaga agcatggact actgaggaaa aatgacgaat ggacctgcta aggaggagga
      541 tgaggaaatc agagactaac aagcagctga gagtgacaaa gtgatggagg gagacagaca
      601 actgaaaagg aggaaagagg agagacactc tgctgcgtaa gataccaaaa caaaacaagc
      661 agagataaga gaattgccct caaagccttg cctcagagga aggagagaaa actggagcat
      721 cagtgagaac tcccagcgat gctggctgga gctcaggaaa agatcttacc acaattcaca
      781 tcacagtt
//
LOCUS       KCKM01001828             868 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28787apa ultra-conserved element locus
            uce-937, sequence.
ACCESSION   KCKM01001828
VERSION     KCKM01001828.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 868)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 868)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..868
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28787apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>868
                     /note="ultra-conserved element locus uce-937"
BASE COUNT          223 a          201 c          206 g          238 t
ORIGIN      
        1 caaaaagttt ggtagcgata ttcgcccctc atctcaagga ccgaattccc tgcgttcctc
       61 tcgtgttgat agtttgggat ttttccattg ttccaaattg tttgtctctc caaaaacgac
      121 ctggaaagaa atctgttgtt aatcacatat caacgaggga gggatgatta gttaataaaa
      181 accatgcctt gtttctgtgg accgaatggc taactctggt tctcagtgtg tgcggagcct
      241 cttgaaagac cgttcccatc ctccagtgat gtagctgccg ctctccccgc ggaatgagaa
      301 gttcgctatt caccccgtgc ttgcatcacc cttcccaaca tgttcccact gatacattaa
      361 aggaattaat tgctcataat gatctcacca tctgttaaca gaggttcata cctacaggct
      421 ggtggcatgt ggtggtccta ttcaggactc aataggcgat gctgggggaa cgctttccca
      481 cattgccttc cctcgcgctc tgaaaagggg aggagagctc agtgttggcc atctgctcct
      541 tgtctttctg tgcgagagac cttgatgcag tccagcccgg ctctgatctg actccagtct
      601 gattggaatg tggctgatct gagagcctct caaagctgtg aaagtgagtc aaaaggagat
      661 ccccattgtc cggccgggct gaaagaaaat gatcacttta aaattcataa ctcccaggtg
      721 cccgccatct attcatggga aaaaactctc tgaacttctc ttcattaaaa agagagggag
      781 tccggctaaa aagggagaaa aggaagtagt ttgtgggaaa tgtgcaaggg atttcaggct
      841 aaacaaatga ggaatttgga atttttgc
//
LOCUS       KCKM01001829             955 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28803apa ultra-conserved element locus
            uce-3884, sequence.
ACCESSION   KCKM01001829
VERSION     KCKM01001829.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 955)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 955)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..955
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28803apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>955
                     /note="ultra-conserved element locus uce-3884"
BASE COUNT          296 a          235 c          160 g          264 t
ORIGIN      
        1 tcccccagag caatctgaac aaaacacact cctggtagaa agtgtagaag cccaatgatg
       61 agatctcatc gtttgacgtg gtccttacca ttcacatcga catttataca gacacaagtg
      121 agaggaaaaa aatggcagtg gtttgcagag cctgctcacc ctgagtttca gccacagata
      181 actgcacaac ttatccctaa atataccaaa aagccagccc cttcccattt ttttattccc
      241 agtgaaggaa taacagaaat gaagacttgg ttacaaactc ccattcagct tttttcttaa
      301 tcataaattc atacaaccag atgcaataga tagggacaaa cacatacatg ttctgatgtg
      361 aaggcaacca gtcttggaat agctgccatt cctttttctt taacttctgg gaacatcttg
      421 aaacgtgcaa tcaacatagc atacatgtta gatatggcac cacctggagt ccacagtaat
      481 atactgttac ttttactatg cattgtaata tcattgcaga acaaatgaca atctcgctac
      541 aatctctaat gttattgttt ctgctgcatg acagaaacgt ggattcctct tcctgatgct
      601 cctcacagct gggctgtgta ataacaacat ctactacacc ccaacagtaa aaaagtacta
      661 ctgcaaaaaa cgattgaggc ttcctgccat cctcattttt gctttcattt ctactttagt
      721 ctccaatctt atctttccct atgccattaa cacataaact ccactctgtt ccacctccca
      781 agcagatgtc acaacaaggc aacatcctaa ggtgcttcca agtgcaacct aatctgtgct
      841 ctcctctccc aaatcagggt ggcatttcac gacccagctc tgaggaaacc tatcttctag
      901 ataactggag tggggaagtg aaggcaaagg aaaaagggtt attctaacaa gtgtt
//
LOCUS       KCKM01001830             830 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28819apa ultra-conserved element locus
            uce-7972, sequence.
ACCESSION   KCKM01001830
VERSION     KCKM01001830.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 830)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 830)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..830
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28819apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>830
                     /note="ultra-conserved element locus uce-7972"
BASE COUNT          192 a          237 c          173 g          228 t
ORIGIN      
        1 ggtgttggag cgggagggag ctatgggaga ggtctggcag tttacaggag aaagcaaccc
       61 agctccctcc cggtgcattc cttcccctct atctcccaac ctctttgcat gtgtcttgtc
      121 atattttctt cagctgctaa ttgtctggac tgtgagattt taaacagccg cagcttagga
      181 aaagcgaaac ctgtctaagt gactatcgca gcccgtcagc tccatgctgc cgggtaaaat
      241 tttccagggg aagtgctctt ctgatagttc ccgagtctct aagtcaccct ccctccccct
      301 ttccccacca cacacactcc ccttgaggcc tgaatgcact tgtggcaata aaacattcat
      361 gcgacttgga attttaacac aatgccattt ccctagttta acctgaaagg aatgcactag
      421 tcacaacaga ctacatcatc ctgccattaa gccctgccaa ggaaccgctt ttttggctgt
      481 gctgggctgg ctctgacggg aaaggagtac acagacccac acacagagca cagaggggcc
      541 acctctgctt cctcagcctt atccagcaac accctgctct taaccatgac ccctgccctg
      601 cttcagtgct gtgacagccc tgtgcagcat gtgtcacttc aggacttctg cagagtcaca
      661 acactgagca ggcaactcca gaatttcacc aagttgctgc tctgtctcaa caagcacttg
      721 atcatctgcc agagggtggc tggctgctgg gttttttact cttttttggt ttttcttcct
      781 acattttcca gtatcttttt aaaaacatat acacttgtta ctgttaaatc
//
LOCUS       KCKM01001831             650 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28835apa ultra-conserved element locus
            uce-4314, sequence.
ACCESSION   KCKM01001831
VERSION     KCKM01001831.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 650)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 650)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..650
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28835apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>650
                     /note="ultra-conserved element locus uce-4314"
BASE COUNT          185 a          139 c          121 g          205 t
ORIGIN      
        1 tttttctctg tctttttttc ccctttctct cttccttgta cagcataaga tccttaccta
       61 ggagacagtc tgaaatatca ttttcccttt cctaacaaaa ttggagatcg ttccagtgat
      121 tatctgccat ctgttgattt cactatttca attgcatcag aatcctctgg aaaacaactc
      181 ttttctgata gagggttgaa tgtacattca aaggtagctt tggctgagca gtgcccagct
      241 aatcccctta gcacacaggg acaaggctgc caccagctct aattgattct gaaatgaatc
      301 tgtatagaaa attagaaggt ttggattccc atgtgagctt caataaagag ccaggatgta
      361 agcctgacag ctgaatggat tctgaaatga aaatctgata agcggcttaa atttgtactt
      421 aagtccagaa attatttgaa tgctcttgtt aatggcacat tgtatattgt cacctagcta
      481 attatctctg aagatgagtt cttgcagagg agaagataca ccagcctttc acagcctttt
      541 ctcatcagat atttattaaa ttccaccctc cccaccagta gctggaaggc agaaagaaag
      601 gattaggaaa ctgcagttcc tctgtggctg tcagttcact gtaccaaact
//
LOCUS       KCKM01001832            1178 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28850apa ultra-conserved element locus
            uce-2054, sequence.
ACCESSION   KCKM01001832
VERSION     KCKM01001832.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1178)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1178)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1178
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28850apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1178
                     /note="ultra-conserved element locus uce-2054"
BASE COUNT          413 a          229 c          176 g          360 t
ORIGIN      
        1 caataaactt tcttcacaaa aactaccagt ctcacattct agcctgattt catacaatcc
       61 tgcaaacagc aactggtttt atatattctg tggtaaatcc agtgacagac actgttcagg
      121 aacataagtt tagagcatac acgttcctat aagaacaaac atttcctttc tcttgtttac
      181 tatgccacac attataacac ctttctacta tacggtgtca ctcagaacat acagtaccca
      241 tttcatattg attaaaaagt gtttgaaaac attttatcat attttgaaat acagcctgca
      301 tgtttagctc catttttgat accctcaaat acaacagata ttaagcgtgg aaagcatcat
      361 gagtggatcg taaaacaaat actttgacca aaaccacagg gcattctatg tcttcaatca
      421 aacgacagca attaatatga aattctaaat acagaatata atgccacata aatagtataa
      481 cagccaagtc ctgtctaaga agccatatgt tttttcccat tgttcaaaaa aaggagatga
      541 cttcccgtca cttatgtttc tgattagcaa ggtgatttat gccacaatca ctaaaaatgc
      601 cagcaagtga atgagaaaat gcatagtgac tgcaccagat gtgcacaata aacaggaatc
      661 ccattgtaat ctctggtact tagtttatat gaaggtaatg taagaaacac tcttggatat
      721 ggcaaagtca ctcttttttt acatttgact ataaatgata tgaaataaat tgtgtgtttt
      781 atactttatg gcatgcatac attgataaat taggtacagt tttgtatccc gacttatcta
      841 caagacaaac ctggctaaga tcatggggat taattgcttc agaagtgtga aatgcagctt
      901 ttccattctt ttctgcacac tcagtgaaga aacaatgatt aatcactgtt taactattct
      961 cttgaggatc tacaagattg ccaaagcagg acttatcctc ataaatccaa aaaacacagg
     1021 tttagatttg ttgccagcaa ctgaaagaac atgaacttaa acccattcat tatcagatta
     1081 aaacaatgtc aaggctttag aaccccctac cactgcaaaa ttctttttaa tctgcaccta
     1141 acaatgggaa ttggattatc aaatcagatt tgagaaaa
//
LOCUS       KCKM01001833             456 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28865apa ultra-conserved element locus
            uce-7161, sequence.
ACCESSION   KCKM01001833
VERSION     KCKM01001833.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 456)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 456)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28865apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>456
                     /note="ultra-conserved element locus uce-7161"
BASE COUNT          172 a           72 c           73 g          139 t
ORIGIN      
        1 attttaattt gtgacacttt actagattag atggaaagaa tgtaatattt aaaaaaggaa
       61 aatgtgatta agaagcttaa gtgcacagta tattacatga aaattctgat cataaagaaa
      121 ggtaatatct actcaaaatt ataatttctg tacttttgaa atcatctcag caagaattat
      181 ctacccatat caaattgtag cacttgtcaa aatcaactgt aaagcatctc aagtgctctt
      241 ctgaatcaac aaaacagatg tatagcgatg tgaggttgca ctgaaatgga aataaaagtg
      301 aactagatgc cagtcattgc ccttaatctc ttgaactcag cacttaacac agaggatact
      361 acaggtcttt gggacactgt ttagaagggg aagaaatcaa gacttgaatc ttaataacat
      421 atgcaaaaac actctaaaat tctttttctt tctgct
//
LOCUS       KCKM01001834            1175 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28879apa ultra-conserved element locus
            uce-1469, sequence.
ACCESSION   KCKM01001834
VERSION     KCKM01001834.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1175)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1175)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1175
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28879apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1175
                     /note="ultra-conserved element locus uce-1469"
BASE COUNT          375 a          212 c          198 g          390 t
ORIGIN      
        1 aaaactctgc cttagaaagg ttaattatta tattctactc catgtggcat gtaaagttat
       61 aatgaaagtg ccttagtact agaggattat agtactgtac acagttctag caaacagaat
      121 gaataattga aatccagtgc ttttatgctt cactgaaaaa aacgaatatt tcatggcaca
      181 taaagttatt cagcttattt gcattaggct tgaatgatca ccactgacca aaacagaagc
      241 aatgatggta ccttgatgta agtggcgaag aacattcata aatattctta ggaagcaaga
      301 tgtacctgca tttaatcagt acttattaaa attttattcc ctatagttat tcaacaggat
      361 ctgtggtata aaaacataat tacaaaaatc agatttgagc tcatttgaca acagaagggt
      421 tttatggtga cctatctcca aatgttccta tttgtaatta aatgcagcga tcagcagtaa
      481 ggattttgaa gctgttttag tagttccgct attctgctta acatgtggca cccgtaataa
      541 ttaaaatgat actaacacat gcacaatttt atggccctta tggtgcaacc cattatgcca
      601 aataagggcc tctgttttca cagcatactg cacatggtct cattacaccc acttttcttt
      661 tcctgtcttc acactaacaa ctgttaaagt gaatcaacac acgaaacgta ctataacagc
      721 ttagtgttta tgatatgtgt gctgttagtc agtgaacagg aaaatctaaa catttactgt
      781 ttatgtaaag aatagcgtta gtgttagcga attgcttggg tctgcttact ttattatcta
      841 gatcacaaac ataatgatgg gtgtcaatgg tacctatatt ttccctttgc ttccatctcc
      901 tgtgtagatg tctataagaa ttagaggaac ttcacatttg cagttcttga aatgttttct
      961 gttgagtagt ttgccttctg cactaaagcg ggaggaaaat atttctatca taaactccca
     1021 ccatcaaaaa atatttccat caattttctc ttccacttca acatattgtg cttggactag
     1081 actggtttat ccaaggtgtt agaaagttac ataattttcc cgcaacacct caagaaattc
     1141 tacaagaaac tgggaattct agattagtgg ttttt
//
LOCUS       KCKM01001835             803 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28893apa ultra-conserved element locus
            uce-5719, sequence.
ACCESSION   KCKM01001835
VERSION     KCKM01001835.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 803)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 803)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..803
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28893apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>803
                     /note="ultra-conserved element locus uce-5719"
BASE COUNT          264 a          147 c          184 g          208 t
ORIGIN      
        1 tcccctttaa tccgggtgat tgggagagta ttttctagtg ctgaagcgtt ggtacagagt
       61 ttccgaaaag ccaagcagca taccaaggag gagctcaagt ctcttcaagg aaaggatgaa
      121 gacaaagatg aagatgaaaa ggaaaaagct gcctgttcgg ctgctgctat ggaagaagat
      181 tcaggcgcat catcatcttc atcgtcaaga ataggtgata acccacaggg agataacaac
      241 ctccaaaaac taggcccaga tgaagtgtct gtagatattg aagcagtcag acgggtctat
      301 gatagattac tttctaatga aaaaatagaa actgcctttt taaatgcact tgtgtacttg
      361 tcacctaatg tggaatgtga cttgacttac cataatgtgt actctcggga tcctaactat
      421 ctgaatttgt ttattatcgt tatggagaac ggcaatcttc atagcccaga atacctggaa
      481 atggctctac cactgttttg caaagcaatg agcaaactac cccttgcagc tcaagcaaaa
      541 ctggtcagat tgtggtctaa atacagagca gaccaaatta ggaggatgat ggaaacattt
      601 cagcagctta ttacttacaa agtcataagc aacgagttca atagtcgtaa cctagtgaat
      661 gatgatgatg ctgttgttgc tgcttcaaag tgcttgaaaa tggtttacta tgcaaatgta
      721 gtaggagggg atgtggatac agatcataat gaagaggaag atgaggaacc catcccagaa
      781 tcaagtgaac taactcttca aga
//
LOCUS       KCKM01001836             749 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28908apa ultra-conserved element locus
            uce-5025, sequence.
ACCESSION   KCKM01001836
VERSION     KCKM01001836.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 749)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 749)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..749
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28908apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>749
                     /note="ultra-conserved element locus uce-5025"
BASE COUNT          232 a          135 c          121 g          261 t
ORIGIN      
        1 tttcttggga atatgatctc aggaggataa ggaaagagca gtggctttct gttaatggtt
       61 ttcccccttc taacacacag aaaatgtctg taatactctt ttgaccccat ttaatttctt
      121 caaggggagc acttgtctct tcaagcttcc tcctgaaaat atattttaaa aagttgctgc
      181 aggtttgtaa taatttagca ggataaagaa gtacagtcat tactattgca gtcctttttt
      241 cctcaattag tgtttctaat cacattagac atgttttcag tatccagaga ggatgcctta
      301 tccctacagc tatcgtgaac cattaacttt aattaaaatt tacaagtcta atgttgttac
      361 atctgctaaa agcattaact gccatgttaa ttaccaaaat gttaatgttg cgttaaaata
      421 tgaatgttcc cttttgacag ttcgtctgta gtttcattat ttatttttct tagaatatct
      481 cctaaaaaaa gaaaaaggca cgaaagcata aatgctgact gaaataatga ggcttaatgg
      541 gaaaaaaaaa gaaaacttaa tactttacca gttgttaaag gaaactcatt tgtattcttt
      601 gcatcttaaa taaatacacg gtgcttgtgt catgcctaag atgttattgc acattctttt
      661 gctgttcctc tgtagggata tctaatagtt cttaaatccc cgtaactgag cgctgtcatt
      721 gtttcggccc tataataaaa acttccccc
//
LOCUS       KCKM01001837            1027 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28923apa ultra-conserved element locus
            uce-6555, sequence.
ACCESSION   KCKM01001837
VERSION     KCKM01001837.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1027)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1027)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1027
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28923apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1027
                     /note="ultra-conserved element locus uce-6555"
BASE COUNT          314 a          168 c          222 g          323 t
ORIGIN      
        1 gcatggtaag aagcacgtaa gggaaaggag tccaatagat ttcatgtctc ctactcaaag
       61 catgttcctc tctgaagaaa accagttctg gaggagtttg ggagagcgag gggctgtgct
      121 tgggggaagt gagtaaaccc tctgcagtcc tatactggaa tgtgtttgat tttattacgt
      181 agccagagct taagcgagct acattgctca gtgtttctga gctgctctgg tgtttattga
      241 gagttacaat aaaaactaaa gccgatattt aaatcctgcc tgattagtga gaacagaaat
      301 gtttgcggga aagtctgaat tagttccact tcataacaga gtaaatagca gatttcagcc
      361 ttcgtttaaa acaaaaggtg aatctcatac ccagaatcca gtgtgtctca aaaaattatt
      421 tccttggaag tataaattgg gatgccgatg aagtttcaga acaaaacggg tatttttata
      481 ctttgttcat ttcatattta tcactagctt gtttgctaat tttcatttgc aagaggcaat
      541 tcttccagct aactggctgc ctcaatgggc cactgatttc tttgaagtga cagtctgtaa
      601 atatgcataa aaaagagatg caattagcgt gtgtgtggtt cagtgcagcc tgatttcatt
      661 ggcaagttta cccacagtgt tgataagcta cattatctag aaaattggcc gctgaaaaac
      721 agcacctctg attgccagca aaggttccag ataacagggt gctgaagaga aatataattg
      781 aggttgaata tgttaaccaa ggtgtcacat gctccttaga agcgctaatt tatcagcatg
      841 ttggaatttt tattaacatt tggaatgcat ttctaccaca ctaatgaagt ggaattggca
      901 gttcaggttt tagttattgt catttctgag aagttaaatg taatttctcg ttagacacag
      961 ttatgtaaat atatttgttc aggggctgaa aaaattatac attttgcaaa atacaaatat
     1021 gttgtta
//
LOCUS       KCKM01001838             709 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28939apa ultra-conserved element locus
            uce-6255, sequence.
ACCESSION   KCKM01001838
VERSION     KCKM01001838.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 709)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 709)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28939apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>709
                     /note="ultra-conserved element locus uce-6255"
BASE COUNT          240 a          136 c          108 g          225 t
ORIGIN      
        1 tttcaccaag tacccagtgc taatctcttt ccacaggact ttgttgctaa caatgcaaaa
       61 atgtaagttt attttaaatg tagtctctgt cttaaaacaa atttttttcc tggctttctt
      121 actaagagtt gactggaaac attgcagaat acaaccatgt agtatctttg aacacatgcc
      181 ttatgttaga gcatataggc tgcaacattt ttcactgttc tatgttaaat catgcattca
      241 gttgtttcca tttatactgc atcaaagcag ttgaaatcca attgaaaagt ttctttagac
      301 agccattgtg caggaacatg atgtcaatat taataaaggc tgaatttccc cttggctcac
      361 ttcttacaga taagcttttc aataatacac tgcttgcacc aaaggtctga tgggactggg
      421 aatagtaaaa aacactaata aaagaatgtt gaatgttttt atattaaatt tccccacagg
      481 caaactgaaa agcctactta gagtatgcca atcaacatgg cacttattaa atgtaacaag
      541 agtcctgtta caacagatct ttaaagcccc taaatatgaa ttaggaaata aagacaaaag
      601 acaattacag atgtatttat agattgaagc cctggacacc tcacctgata ttactaacat
      661 gacactatgt ttgatcttca aaaagactcc ttttctatca gcctacagc
//
LOCUS       KCKM01001839             984 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28953apa ultra-conserved element locus
            uce-7237, sequence.
ACCESSION   KCKM01001839
VERSION     KCKM01001839.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 984)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 984)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..984
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28953apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>984
                     /note="ultra-conserved element locus uce-7237"
BASE COUNT          302 a          186 c          175 g          321 t
ORIGIN      
        1 cacagccacg atgtgtcaaa cattgtagaa gtatgagagg atattttatt agctgataag
       61 ctggactgct attcaccgag gaagaagatt atcaaacaaa ttacactgag aaccaataat
      121 aggggaaagg ttaatgattt ctgtaagcca ccaaattcac ccgcccctgt agtttactaa
      181 gaaaattaga gattcttcat gctgagctta tggggacact ttacctatat ttcagccctt
      241 ctttcctcag agatctttgg catcgctgct ttcttgcttc agaatttaca ttaaggacaa
      301 ttataaaacc caccattcag gaaaatatac aacttcttat cagagggatg tggatgttct
      361 tcttgccagt ctacagacat ggagattaaa tttcagagag agatttattt tgtgctattg
      421 tcctgttatt caccagagga ttgtgcaatg caagtaatct gatcagaata atgcataggg
      481 acatatttca gaaaaccaat aattgtggta acgttgagct ctgcaaggtg ccaaaataaa
      541 gtccaaaatc actctcactc ttttccacaa ttccttaatc atggcatcat aatgtgctgc
      601 tctgttgtcc attaaagcca caagcttgaa gtaatcaatg ccggacattt ggagatttat
      661 tgtaatttta gatctacagc acttttgcag gctgaaaagc aaaattatat tttataggtg
      721 tgccatatct tacattttac agcttttact tctttcagct ggctcggtgc gggtttctgt
      781 tgttggctcg aggttgtttt tttcttttaa cctgagtgct gcaggctttt ttacgatgtt
      841 aggaagcagt taaggcaaac aacagaaaaa attactaaaa ctgactgtat ttaaattctg
      901 tttacttcct taaccttttg acttacctat acaaaaagta atctttcata aacaagcccc
      961 aaacaaaatc attgcttatt ttac
//
LOCUS       KCKM01001840             977 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28968apa ultra-conserved element locus
            uce-2369, sequence.
ACCESSION   KCKM01001840
VERSION     KCKM01001840.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 977)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 977)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..977
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28968apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>977
                     /note="ultra-conserved element locus uce-2369"
BASE COUNT          236 a          235 c          231 g          275 t
ORIGIN      
        1 caaggtgaga cctcgtacta tggagctggg cgtattttat ctacagaccc atcctgaagc
       61 cacagcactg gtttgtgctg tccctttggc tgtagcatcc cagaacctac aacctcagtg
      121 caggctcggt gcttgctctt tggctagaag tagcctgcaa aaaaatgatc tcgtaatttt
      181 aacactttca tttttgttta acagcggggc tctggaggtt tgcaggcatc tttcaggagg
      241 ctttggatcc agttatagtt gttagttacg ctgtgcagtg gagcagcact cacacaaaac
      301 caacatggca gctggtgctg gggtttcatg gacacataac agcccaaatg ccaaaaagac
      361 gaggggaaaa aaaaatctat ttaagcaatt ttttcctctc tataggaact tagtctgtca
      421 gcagcataaa cacttgcaat catgcacttc ctaggatgca tgtgctatcg aaaagggagg
      481 tgttaattgc tgtgctaatt acaacatgat tgctttgcac ttgttttgca cttgcaggtg
      541 attaaatttt taacgaagca tattacttgg cactgttagc acagttaaca catttctctc
      601 tctcccccct ttctctctcc tcccccctcc cactcatttt ttttttgcct tgggagaagt
      661 cctgtgctgc agacccttcg ctggctgtga tgtgctgttg tgcttggaac cagcctctgt
      721 ttaggctgag caccccagct tcccgctcgc aaagagcagc agcctgttat cgtcaggctc
      781 agcgtgacgg cgccggccag atgcgaacgc agaacccacc aaggtattag ctaaaaatta
      841 gacaaggctg ttgatgccag tctcccagat ttcatttaaa aactgtgcca gctcgagcca
      901 gtcaggcggc agcggtagag ggtgtgtggg aaggtggaga aatgacagca agttccccgt
      961 gatttatttc tggtttg
//
LOCUS       KCKM01001841            1044 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28982apa ultra-conserved element locus
            uce-5379, sequence.
ACCESSION   KCKM01001841
VERSION     KCKM01001841.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1044)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1044)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1044
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28982apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1044
                     /note="ultra-conserved element locus uce-5379"
BASE COUNT          296 a          198 c          220 g          330 t
ORIGIN      
        1 ttcagtgaaa aatgatgttt taaagtaagg cacatgctga aacagacaca cgttttcact
       61 agctgtgttt atacagtgag aaggcgaatt atcattacca ctcctgatac tcctgcatgt
      121 gttttgcgta ttgccttgct cgtttgtgtt ttgtcgaaat acataataaa gaacgtgttt
      181 gtttccagga tctcagctct gctttgttcc gatcgcagcg ttctgggtaa aaatctcctc
      241 ctgtgtgttg ttatgtgata gatcactgct gcgatgaagc ttttattccg cagaaatgtg
      301 ctttgcaggg gtgtcctgcg ataaaggaag cgttgtggta gaagcaaacc ggcgtagaac
      361 tgtggaaaaa aaaacaggca tcttgtttgg aaatcgaatt taattcacaa gcactctcaa
      421 tctctagtaa tataactgct ttaaattttc agacagtggg agtagctcac cgttgcccaa
      481 gtatgcctca tctcccaaac caaacaacag ctacatgttc aaacgagagc ccccagaggg
      541 atgtgagcga gtgaaggtct ttgaggaaat gtcgtaagta atgcctttta tatcagctgg
      601 tatctgcaac gcagtaaacc tgtttactga gccattcaac tgcagatgaa taaactatcc
      661 cagctgatga gtttttcagg agcacactat tctttttgta caggagagaa gtcgaagtgt
      721 tcgcgctgct ttgaagagga aatggagtct tttatgcttg aactcttttt gcgcgtttgt
      781 aaaaggcaac aaaaatccga gcagaacaga tgaggtacat tgaattcccg aagcatttat
      841 aagcctcttt ccatgtattt ttttttaaac tttttaaata tccatggctc aaaacaaaaa
      901 ctcttctttg tcgtaatttt ttctcgcttt caagcatagg ttactttttg atatgtgtaa
      961 aacatctaaa atggaatgaa acctatgtaa acgttttgtg gacggtagca tgctcatggc
     1021 atagactttg ctcgatattt ttgc
//
LOCUS       KCKM01001842             902 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 28998apa ultra-conserved element locus
            uce-2187, sequence.
ACCESSION   KCKM01001842
VERSION     KCKM01001842.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 902)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 902)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..902
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28998apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>902
                     /note="ultra-conserved element locus uce-2187"
BASE COUNT          221 a          206 c          221 g          254 t
ORIGIN      
        1 tctttctgcc tttagaacaa aaatcacaac tgagcctttg gcattcagta tctattccca
       61 gtctgctcag ctttactttc tcaccccgtg gcatttgcaa tgaaaaggaa agcacatgcc
      121 tggatttaat tctataaacc ctcttccttc gaccctttct taagcatgtt gtgcgtttgc
      181 aggtgtgtgt gtttgtgtgc gcgtgtatgc gtgtatttgt ggcaggagaa cacaggatct
      241 aaccattgga gtgcaatgga tatgggaggg gagcagtgcc cagcacagat taagggagtt
      301 ctcattactg aaacgataac ttccatctaa cacaataaga gtgtcactct ttctcacttt
      361 gtagagagca ctgcctattt ctgatcatga cataaaatac ttgctggagc ctgggcattc
      421 tcgaaacgct gagctccttg ctgcgtgtgc tgtagatgtc actgctgtct gattgtgctt
      481 gaattaacac actgttttga cttgtggaaa atgcctaaag gacaatgcaa aaagcttttg
      541 tgaatttgtt tttaaagaaa gaaatccggt ttcttcgtgt ttccatttag aaggcagaga
      601 gtgtgtgaac tgtggagcaa ctgctacccc tctctggaga agagacggca ccgggcatta
      661 cctgtgtaac gcctgcgggc tctaccacaa aatgaacggt caaaaccgac ctctcattaa
      721 acctaaacga aggctggtag gtgtctctgt ttctcctggg tttggggata aattaggcaa
      781 agggaccaca cgcaggcacg agttgagcat gtcccatctc tgctcagccc ctgtgtggag
      841 cgagctgtcc tgtacacggg ggtcagtcac gtcgaggtca ctgctgcgcc tcggggcaca
      901 tc
//
LOCUS       KCKM01001843             429 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29013apa ultra-conserved element locus
            uce-4762, sequence.
ACCESSION   KCKM01001843
VERSION     KCKM01001843.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 429)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 429)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29013apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>429
                     /note="ultra-conserved element locus uce-4762"
BASE COUNT          161 a           57 c           75 g          136 t
ORIGIN      
        1 atgttacgac ttcatttttc atttgtgttt tcaagtttgc cttgaaaatc agagattgcg
       61 ctaaaggaaa aaagacaata ttatatcaaa gaaaaagaaa aattataagc atgacttatc
      121 tttaatgttt tacatcaaaa tgaaatttct gtgatatgtg tcatgtgcat aaacaacaca
      181 ggcagctttt gtctttgttg aatttaaatg aaaagtccct ctagatatta atatgtggac
      241 ttcatttgtt agcctgctaa gtcagggact tataacaaaa gctttgtaaa caaaagatta
      301 aactgaatcg agctttagaa aatgaaagga aaacaagagt caaataatca cagatcagag
      361 tggggctgct tagattgaaa tcactacaag ctactggagt ggaaaatgtt taattgaact
      421 atttcatta
//
LOCUS       KCKM01001844             945 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29027apa ultra-conserved element locus
            uce-432, sequence.
ACCESSION   KCKM01001844
VERSION     KCKM01001844.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 945)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 945)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..945
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29027apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>945
                     /note="ultra-conserved element locus uce-432"
BASE COUNT          256 a          196 c          218 g          275 t
ORIGIN      
        1 cagctctcat tttcagcagc ttttaatttt tttaattgtt taagtatagc agggatcaag
       61 ccatgtgttt tccatctggt agaagaaacg gtaggaatta ggcagaggag atagcccttt
      121 aacatctcgt gtgggaggaa aatcagggtc agattaaact gtgatgcttt tttcctggaa
      181 agtggatctc cttatccctg gtgttctact ggagacacag agcctcagta ttctaaagca
      241 aattagaagt actttttcat taaatgtgat tgcagaaagt cctgggaagg aatgtgttaa
      301 tgactggtga ttgaatgcag tggcttgcaa gctctaagca gctttagtgt ctcctaccac
      361 agccctgatt taaaattcat aaatgctaat cctccataat ttacggttta aaaagcagcc
      421 ccactcacag gccctgtggc tacagctctg tcagagtaat tatgccgcca agctgaaatt
      481 ggactactaa ctgagatatt aaacagggta ggaaatcctc ttccctggca gcctacccaa
      541 ttattccaaa taagcaaaca gattagtgag taattttcca gttaaatctg gtgattggtg
      601 ccagaattgt atgttaaata ttcagaagta aatagattaa agatgaaatg ttcccttttc
      661 tcaagcttaa tttagtgtgt atattaaaac tttttagggg gaaaaaaatc ttcactgaag
      721 tgcagtgtgc tcgctttgaa aacagaacct ttcccggcgt gtttgcactt ggggcagtgc
      781 cattcattag ctggggcacg ctgtgacgag ggaaccttgt gccacattag acacagtatc
      841 agccctgctg ctcctttatc cctcaccttg gaggagccct cctgggtggc agggctggga
      901 ggctgcacgc tgctctgctc gggaccctcg gggacagctc tgcgc
//
LOCUS       KCKM01001845             800 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29043apa ultra-conserved element locus
            uce-6806, sequence.
ACCESSION   KCKM01001845
VERSION     KCKM01001845.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 800)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 800)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..800
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29043apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>800
                     /note="ultra-conserved element locus uce-6806"
BASE COUNT          253 a          146 c          161 g          240 t
ORIGIN      
        1 tctaggtcag agaatttcag tttcaacacc tttcatctgg cacctttcac tagtgctaaa
       61 tgcacttaaa cacacgaaaa aagctttttt tgtagtcata gtactcggag agagctgggg
      121 agcatatttt ataagtatca gttctagtgt ctgcaattag aagtacatgc aagttttaca
      181 tttgcttctg cagaaaatgt ccaatgtcaa tgcacagaaa tacgttaatt gtttattttt
      241 agaaacctct ctagaaagtt ttgcatattc tgtaatatca caaaggactt cttctgttta
      301 cagttgctta gaactaagaa gatagatatt tacccaagtt ttcttggctt cctcttgctc
      361 ccttgatatt ctagagttcc ctgtggagag ggccaagaac acacagtcaa agcaaagcag
      421 caagtcgtta atttttaatt caaagtgatt ttgtgttgaa tgcaagcaga tgctgataat
      481 atcagaagtc acagcataat ttttttgatc aaagggctca agtgagcctg atgaagcatg
      541 catcttgctc gtctttgata aaccacatca attattcacc gtgaaggcag acatcctgac
      601 atgaaagcaa cagataaaga gcataagcac atgttcaaga cgagagcaga agaacgtggg
      661 ggtggggctg gaggggctga aacaggtatt aataacagaa ttattaactg gaaacaaagc
      721 cagtaaaaca gctttattgc cactttgaac tcacgtttaa ctggttatag tacatgttgt
      781 cctcagggct attcagcatt
//
LOCUS       KCKM01001846             389 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29058apa ultra-conserved element locus
            uce-5087, sequence.
ACCESSION   KCKM01001846
VERSION     KCKM01001846.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 389)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 389)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29058apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>389
                     /note="ultra-conserved element locus uce-5087"
BASE COUNT          101 a           84 c          102 g          102 t
ORIGIN      
        1 cctcaatctt cttaaataac gagggtggtc ccggcagctt ttcatcagtt gctcatcagc
       61 atgctaattg ctgtatgact aattatgccc tgaattccag ttgattttct taatgagaca
      121 gctgggttaa ttatgtaatc gtatgattac attagcccag agtgccctgg cgaaaaggaa
      181 cgcgtgattc ggcgctgaca agggggggca ttcatcccgc ctaatgacag gggagggcag
      241 cgggacccac cgtgctcttc gtgtaaacac ttagattgaa ttattaagat ctgggcccca
      301 ggccacagga tgagggagga atgagtttga aaggaaacac tctttggaga ttcagccagt
      361 catcgacagg cctgtatatc tcaggttga
//
LOCUS       KCKM01001847             882 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29073apa ultra-conserved element locus
            uce-3540, sequence.
ACCESSION   KCKM01001847
VERSION     KCKM01001847.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 882)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 882)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..882
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29073apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>882
                     /note="ultra-conserved element locus uce-3540"
BASE COUNT          257 a          182 c          180 g          263 t
ORIGIN      
        1 ctgcagaggg aagcataaga gtttcatcac gtgttaaaag tataaagcaa aatatcacag
       61 ttctcagtac gactttgtgc cagatgctag cacatcgtgc ttacagagct gactcctgtg
      121 agtaatactc ctcacctgag caagcacttg cagtgttcaa gacctccctt tgcagggttg
      181 gagagttttg aaattttttt ttctttcaag agcttattaa aattgaaaaa ttatgcagcc
      241 cattgcttag ttgtttctca taggctttag agcactcgga gagcgtgtca tctttgtacc
      301 ctgattctca gcctcccagg ctctctctct gaagaggccg ggcaagcttc agtgccacgt
      361 agcactcaga agtggcgctc agactgtaaa tattatatgc tgctgtaaga acatttgaat
      421 ggtaatactc aagcaattac tttcctttca agatcattaa acacaaatct gacttgtatt
      481 ttaataggac tgccaatgta tttaatgggg ggcagtaaag ggtaggtttt ttctaatgga
      541 tgaatgttta tattattatc cactctgaga gagcacatta ggaggagact gtataatcct
      601 catgtgtttt gcctcagtcc ttttcgcaca gtagtcaatt tttttttctc agttctgcat
      661 cttacagcac gacaacaaaa ctgcatttgc aataaatccc accaccatat tctgatcacc
      721 agacaaaaaa gaccaaatac agtaatgctg aagagaattt gcatttccat catgtctgtt
      781 aaaattttag agaaagccaa tgattggcaa gttgacaggc ctggacagtg acacctgcta
      841 tgcagtcatg ggacaggcac tgtaggactg agggtaacac ca
//
LOCUS       KCKM01001848             775 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29089apa ultra-conserved element locus
            uce-5688, sequence.
ACCESSION   KCKM01001848
VERSION     KCKM01001848.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 775)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 775)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..775
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29089apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>775
                     /note="ultra-conserved element locus uce-5688"
BASE COUNT          249 a          140 c          175 g          211 t
ORIGIN      
        1 attttgttct gatctctgat gtaaatcaag tgtaagtcca tttcagtaag gaaggctaca
       61 aaagagatca gtgctctgtg ctgagacaga caggctgact gtctcagctg gcataaactg
      121 gtgtagttgc aggagggcta agttatttta ccccagatga gaatctcttt attgtgtctc
      181 tcagaacaat cctttattga acaaagcccg aggggagaaa gggagagaag aatgatggaa
      241 agaaggagac caaaagctgc gcagggcaga agtacacaaa accctcttcc cctatcactg
      301 attacaaatt attgtacaag ctgagcccca tattgtatac ttcatttaca gtaattgtac
      361 aacagctgta taataggtgt agtttaaggt atgagtgttg ctcagagtgt agctgaaatg
      421 tccacagtga gatgtgaata tgaatatgaa tggtcctgac tgcatagtaa ttggtggtat
      481 tatgggagtg aatggaaaag ctacatatgg atgaatgggt ggggctaggg aagggtgcag
      541 cacaagagac taatggtaga ttttattttc tcacatagat gccttctcct ttaaataatt
      601 agccagcggc agtagaagca aatgaaaaga aagagaagga gaccagtttg gcacactgaa
      661 gctctgtact cattatatta aatcattcca atttccctct cttcacccta cctacctacc
      721 tattcatcca ttggcattaa acttataaca tgaacaacag aaaagttcca acctg
//
LOCUS       KCKM01001849             912 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29104apa ultra-conserved element locus
            uce-638, sequence.
ACCESSION   KCKM01001849
VERSION     KCKM01001849.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 912)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 912)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..912
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29104apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>912
                     /note="ultra-conserved element locus uce-638"
BASE COUNT          328 a          156 c          142 g          286 t
ORIGIN      
        1 aagaaaaatc atgatataaa ttcataatac atcaggcaag tatttttaat gaactttttt
       61 ttagtccata gctcaaatcc tgacatttat tatttcaatg aagatgctct tcctaggatt
      121 tctgtgaaaa aagaaagcca ttttcaaatc ttgaaacaaa ttggctccca tatgtaagtt
      181 taaattatcc atcaccctgc aggaggattc aagcaaaatc gaaggccatc ttgatgaata
      241 atcaaggtaa atttgtcaca ttttttaccg tgctgcatac tttgagagtt tcataaaaag
      301 atccacgtaa ttagtttagc ttaccaggaa aaaaaaattg aatgacaagg tcaggctctt
      361 gccctttcca taaattagag aagattgcca taaattgcat aatataatga aacaccaatt
      421 tgcatatttg ctgctatatt aaaagggatc agttttagct cgcaaagcag aacaaataaa
      481 aacatgcatt ttaataactc aaattactcc caggaagtga ccctcagcag aaagcctgat
      541 tatcactact taattagaag ccttggaaat ctaaatcctc ctttaaatcc tattctgtgt
      601 acagtgaaag atgaagccgt gagttttgtc ttagattcaa tatttactct ttactaatat
      661 gtttgcaggg gagactttcc aagcattatg aagacatgca aaaaaaatta atattcagag
      721 aaagagtgca taaaacctgt gttggcttgc aggtgcaaag caattaacaa gctggcattt
      781 gcagtacttt taattaatta attaaaaatt caaagctgac tttcatttct ttaaatgttt
      841 gaacatttta tccatcaata atgaaccact acttagtgct gtgctacaac agctggtaaa
      901 tgaaaaactc tg
//
LOCUS       KCKM01001850             640 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29119apa ultra-conserved element locus
            uce-2694, sequence.
ACCESSION   KCKM01001850
VERSION     KCKM01001850.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 640)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 640)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..640
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29119apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>640
                     /note="ultra-conserved element locus uce-2694"
BASE COUNT          241 a          107 c           91 g          201 t
ORIGIN      
        1 catcatgaat ggaagtcaaa agttaataca caaaaaagga aaaagatgaa ctagcattct
       61 aatttgttaa ttaattgcta acagaataga cttaaatatt gaaaagacta tttaaacact
      121 ttgtaagact gctctaaagc cacccgtttt gatttctttg atataaaact acgaatcacc
      181 ttaaatgaga caaccttaaa gtacattatg tctgcaattt tctctaattc aagtctaaat
      241 tagagaagac attttatgaa tgtatgctat gctcaaagct aattgaaagc aattatcaaa
      301 gtggcatttt gtctgtgact ttaagataca ttgtaagata ataaatgatt ctcattatgt
      361 aataaaaagg tcacatcttg cctttgggct agtgacgcta agagtttttc aaaagcaatc
      421 cgagacattt tctttagtga actacgacta atacaagaac catcacttat taaatatcag
      481 ttgtcacctg catagtaccc acatcagaga tgggtatttc tttcagaaag aaacaccacc
      541 tcattaaaaa ctggaaaaat atatctcttg aagtgcatac ctgacatttt caagttaaaa
      601 tgaatatcct tcacttgtca ttcactaata gtaatgaaac
//
LOCUS       KCKM01001851             881 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29133apa ultra-conserved element locus
            uce-4086, sequence.
ACCESSION   KCKM01001851
VERSION     KCKM01001851.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 881)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 881)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..881
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29133apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>881
                     /note="ultra-conserved element locus uce-4086"
BASE COUNT          276 a          179 c          182 g          244 t
ORIGIN      
        1 gttaagcgga tgggtgaagg agacaattct acgtagtttt cccaactccg agaccatgac
       61 agaaaaataa atttttgttg cagtcttgaa aaaggcacaa aaagatgttg ttctcttcag
      121 ctgaaactca acacttccaa ttactttacc agcaatttac ctccaatcac tggattttaa
      181 gttaatcccc tctgagttct cagaacatct acaacggcaa tcactttgcc tgctagctga
      241 acagtctttt gggagatctt tccgctttcc tctcaaacac tctccttttt gttataaaat
      301 attattaact taaaaagcca aatgccgcaa agacagtaag ggatacgcag tctgttctga
      361 agcagcagca aggggcctag caatgagggc agactaattt tattaacttc agggaaactt
      421 caaaaagctt tagggcttta atgccagaca gagacgaccc tgaaagtcag tttaagtgct
      481 gcataaacaa aggattaggg caagaaaaag ctgaaggctc cttgcacttc ttgtttatat
      541 tgtcatacga cctagcagaa gtgggagagg gctgcctctc tgactttaat cccccgtggt
      601 gtacagtggc gtttcagttc actgacctac attacgataa tattttttta aatttatggg
      661 cagaggtgca gcatcaaact cacttaagga cttaaaaaaa gggggcaggg gggaagaaat
      721 acccagaaga gaaaaaattt ctggctagta tagtctcccc ctctcactta ggttagatca
      781 gcagcttaaa aagggatttc aagttcaaag ggaatgtctc tgttactctt gttttatggc
      841 ttagaccaga ggacacaata gcacagagtt tatgaaatat c
//
LOCUS       KCKM01001852             614 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29148apa ultra-conserved element locus
            uce-5878, sequence.
ACCESSION   KCKM01001852
VERSION     KCKM01001852.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 614)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 614)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..614
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29148apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>614
                     /note="ultra-conserved element locus uce-5878"
BASE COUNT          128 a          226 c          152 g          108 t
ORIGIN      
        1 ccgtgcatca cccggcagcc tcagagcagc ctgggggtgt cacattcacc ccacgcacac
       61 tgcgtttttc cccacagaca cagagtacat cagtgctgaa gagctggtga aggtggacaa
      121 gatgctgagc cacctgagcg aagagtccaa gcaggcggct gccaccacgc tggtgagccc
      181 cagcctggtc cctgtgctca gctacagctc cggctcccgg cagggacgtg gggtttcttt
      241 gctggcactg ccaacagcct ctgccccctc cacagcccac cagtgaggaa gacctgtgtc
      301 ccatctgcta cgcacaccct atctctgcca tcttcagacc ctgctcccac aagtcgtgca
      361 agtgagtagc tcatgtgtgt aactcccctc cagccccaac caaagcaacg ggccgcgcca
      421 gggtcaggga gctcacgctc tttcctcctc tgtcccagag cctgcatcaa ccagcacctg
      481 atgaacaaca aggactgctt cttctgcaag gccaccatca caggggtgga cgacttcacc
      541 aaaccagcca gctcatagcg cccagcccca catcactggc tcccctagct gagtggggca
      601 gcccccccgc cgct
//
LOCUS       KCKM01001853            1024 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29164apa ultra-conserved element locus
            uce-7703, sequence.
ACCESSION   KCKM01001853
VERSION     KCKM01001853.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1024)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1024)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1024
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29164apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1024
                     /note="ultra-conserved element locus uce-7703"
BASE COUNT          384 a          191 c          172 g          277 t
ORIGIN      
        1 tactgcaaaa agtatctgaa acaatattga tcttttgtct gtcatggcca gaactgcaga
       61 catccaggtc agggctagaa gtggcagcac cacacaggaa ctccaaagag atgccctatt
      121 gaaaaaagaa gagaaaagca gcattgtaat attgtaaaaa attattaaaa gcttactatt
      181 aaattaaatc atatataagg atagcacttt atcaagttaa cttgaaaatc acagacaaga
      241 atgtaacagt gtcatacttt atgttctaaa gaatatccta tattcattta ataaacacag
      301 ttgcaaactt tgttaaaaag tatttaaaca tgctcagcac tctatacagt gttagcaaac
      361 acagttgtca tcatcaaact attgtctcac atgcaccgta taagatttgt aacaagaaga
      421 tgtaaatgat caggactaac atggcattac tggcggtggt ggctgacaaa gctgttgttg
      481 aaactactcc acacttggca catttgagcg tcaaaccgct atgaggctca ctcatctgac
      541 tgcaaacaaa cagaacaccc acaaaaagaa caaaatattg aattgtcacc aaaaaacgtt
      601 gctactgaaa cttagctttt aaatatgacg tcatgcagaa aaagtaagta gacttattca
      661 ggatgaatgc tctatattgt tgcagaactg tactttgcac tctacattat tgttagcttt
      721 aaacatcgat gctatggggc tccacttcat gcagacttta tttcttccat ttaagctata
      781 aaaagcccca aatatccagt gatcaaaact gctcactaca ctaaagtaaa cataagcacg
      841 tgctaggata gacacacaaa gtgaaatccc tctattcaga cctgctaaaa gactgttata
      901 tccaaaattg cttgagaaag agtataggac acttaaagga atagtattta cagagcatta
      961 atagggaaag aaacctggaa aattattcaa gcatcaaaac agtatagtcg tactgtatag
     1021 tcag
//
LOCUS       KCKM01001854             985 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29180apa ultra-conserved element locus
            uce-3648, sequence.
ACCESSION   KCKM01001854
VERSION     KCKM01001854.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 985)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 985)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..985
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29180apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>985
                     /note="ultra-conserved element locus uce-3648"
BASE COUNT          272 a          211 c          209 g          293 t
ORIGIN      
        1 ctgctgttgg ggaggtgcgt tacggcctcg agttgtgcat ttgcagagaa aatatcacac
       61 cggccagatg ctcaagtctg ctctttctgt gcagaaaacc ccgcacaagg ctggaacagc
      121 gtatgaaata ccagcaaaga gctcagcata tttttctgac ttaacagcaa agcacaagca
      181 tttcagtcag gatcacacta tccattaact atctaagtcc taagtctaat taaccctccc
      241 aaactgcctg ccaaagagta tttcctcttt tatgccaccg aaccggttct atgagctctg
      301 ggcaggcagc acctaagtca gatgccgctt tgttgtaatt agggcagcaa attttgtttt
      361 ctgtttggta cttgctgtta catattgcac gtaatgtatg gcactgttaa gggaaaaaaa
      421 ttggagtcaa agtgcctgga aagttaggtc tgctctgtag cactgtgaga ttgttgacat
      481 ctgccgaggt tggagagctc agtaagcagg aaatggggtg tcactctgag tggtagttta
      541 ccattatcct ggcatcctaa tgaagtgtct gcagtgcaca gagcttctgg atggcatctt
      601 aacgcacggc taagcaaaag cacttctctc cttgtcactg tcatccatct gcctgcaccc
      661 tactgtagcc aatgggatgg aaccatgcta caatgtgcta taagccattt agagttgcac
      721 attgcataat cagtcccatc aaatatgtaa aaaatgacta ttattggtta tttccctcaa
      781 actccggcac ctggagtttg atacattaaa gtttaacttt tgtgagtgct acccattaat
      841 tccacatata tttttgttaa atgggactga gttgtgaact cattgtcttg agtcttgcta
      901 atggattgca aaagttgtat gaatattcat tgcaaactcc actttatatc acataggatg
      961 aatttatcaa ttgcccatat agaga
//
LOCUS       KCKM01001855             649 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29196apa ultra-conserved element locus
            uce-7224, sequence.
ACCESSION   KCKM01001855
VERSION     KCKM01001855.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 649)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 649)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..649
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29196apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>649
                     /note="ultra-conserved element locus uce-7224"
BASE COUNT          216 a          127 c          104 g          202 t
ORIGIN      
        1 agaaaaataa tgttagtgtt gtaattttct accgagtata ccaacaacac acttgggaca
       61 catgctattg atccaccagg tcaaggacct caaaatattt gaaattattc tttagaaaaa
      121 taaaataacc cacacttttt tcgaattact gtggtctttc aaagtccata taaagtatta
      181 cgcaaggaga caaagctatt ttaccaggca ggcagatatt ccaaattact ggttcttaac
      241 aagcatggta atacatcagt caaaagcaat aaatttaaac ttaatgaaat ctcaatttgc
      301 ctacagtgca tttcactttg acattttcta cattgccacg gtgctttgat aaagtttttt
      361 aaaatgcaaa gaaagtgtct gtaaggctaa agagcagact tggtgccatt gtgcccaatg
      421 gaacattaca gtacttaagt tccatcacta tatgccctgt ggcaggctaa gcctgagcgc
      481 taacataggt tcagttttca ttatcatcat gtgattatcc attttactgc atttaactga
      541 taatacaact accagctcac cttaaaagaa ttagcttgga ggtttcattg ctttccaaat
      601 ggaattcatt tgacaaacaa atgacaatta gcccagtctc cctgttctg
//
LOCUS       KCKM01001856             915 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29211apa ultra-conserved element locus
            uce-2772, sequence.
ACCESSION   KCKM01001856
VERSION     KCKM01001856.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 915)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 915)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..915
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29211apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>915
                     /note="ultra-conserved element locus uce-2772"
BASE COUNT          242 a          228 c          202 g          243 t
ORIGIN      
        1 tctctagttg tgccttgagt cgtggagcac atttaaagga tccatttgaa ataatctact
       61 aaaccagtga gtgaaagaca gaactcataa aaagcctgta aaaatccaaa tgctccagct
      121 attacagatt tctaaaaata aagcagagta ggtttcagta gcaataatgc gctgcatcat
      181 atccatattt cagatttaaa agaaaactat ggctgccttt tagtgcgcat tgctcagagc
      241 aaaccatggc tgcttctgcc tcgaccacaa atgaaagtga gctttcagct tgccattgtg
      301 ttccatttca tttgtccttt aagtttatct agctgcttct gcacccactt tcacaatgca
      361 taggctgtcg ttccatgacc tagcattatt aaattgcact tatcaatcat tcttgccagg
      421 aatgccatcg ccaactacat taaagaagtc agagaagtct ggtttcagca gtccctcgcc
      481 ttcgcagacc tcctcccttg gaacggcttt cacacagcac catcgacctg tcattacagg
      541 acccagaggt gaggcgtaac ccaagagccc ccaggcagct taaacattag ccacggcacc
      601 cgctgtccgt cccatggaaa gtcctcgcca cgtgtgaccc acctagggag agcctgtgct
      661 tccgaagcct gataacccgg aggttttagt ggtcaagaac tgcatttggt tttgctaggc
      721 tgggctgctt ggtaaaactc ctgctgacca ttcaacagtg cccaaggagg caactcctgg
      781 tttctaggag cttggggttt ggtttgaaga gggtggggaa agggacagaa tgtgttacag
      841 agagtgcctt ctgcttgtgt ccattcacaa catagattcg gtctagctgc tcgagacagg
      901 gacccatctc tcact
//
LOCUS       KCKM01001857            1061 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29227apa ultra-conserved element locus
            uce-662, sequence.
ACCESSION   KCKM01001857
VERSION     KCKM01001857.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1061)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1061)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1061
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29227apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1061
                     /note="ultra-conserved element locus uce-662"
BASE COUNT          322 a          194 c          196 g          349 t
ORIGIN      
        1 ttatcttacc attgcaggaa aacttccatt gcattttgct gcccttcatt gtaactctca
       61 ccaaatatac tagaggcttc caactgtcct tcgtttggac tccacaagca caaatctgta
      121 ttctttcatt aaaaagggac agtgtggaat gttttcctgc atggtatttg ctcagttatt
      181 gctatctgaa ttacactcac atgcatgatt ataatttact ataacgttta caaccaaggt
      241 tttcatgtgg ttttaattta cattgcaatt aaatgaggag agcatcagac atcaggggtt
      301 aagaggtacc ttatctacaa atcataaaaa ttagttagca tttggaaaca gcctgtttat
      361 tgaaataaag atagcaaaaa aagatagaag gtaggaatgt ttatacttgc tcgtctttcc
      421 tcgtacagct atactgtctt gcagaaagtt tttaccccaa gtaaatttct catttgtttt
      481 tttagtgttt gtgttcaata attcatcgat tcccagcagc agggaagagt gagagattta
      541 tggtgtatga ttgtgtcatg tcttgtttta tcatgtcgat agatagaaaa ttgaccacaa
      601 ctacaaaagc ctatttataa ttctatttga tcaccatggg aactcatcaa aacagagggc
      661 agcaccgaag tttcattaac agatcatctc ggatctcctg ctgtgtcctg tcttcatttt
      721 cttttcacat catccttttg cttagagccc cagcatcaga gaggaggtca gagcaacagt
      781 aatggcacat ttaccattcc ccaccatccc ccagattaat attaaactgt taaaagaaaa
      841 tgagagttta ttgattgttt taagccaggc atgttctagc agcaagccgt tattcagatt
      901 cagtgagtgg caatagataa ctgatttcaa taagaagaca gagaagaatg cggtccaggg
      961 atcagaacag agggagaaca atggcagagg aatgtttaat ctttcttatg gcactaatcg
     1021 ttacttttgc aatttgtgat tgtttataga tcatttcttt t
//
LOCUS       KCKM01001858             408 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29241apa ultra-conserved element locus
            uce-4662, sequence.
ACCESSION   KCKM01001858
VERSION     KCKM01001858.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 408)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 408)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29241apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>408
                     /note="ultra-conserved element locus uce-4662"
BASE COUNT          126 a          108 c           64 g          110 t
ORIGIN      
        1 ttgagggatt tcaggctgac attattttta tgatttcaca ttttcttcgc tcttccttct
       61 gctgcaagta ttcctctaag aggcagaaag tgaaaggctc agttaagaaa aacacagcca
      121 cctccaaagt gctaaaactg caataaaccc atcatctcta acaacagcgg agcatgaaaa
      181 gataaaaaac agcctgccaa gaacgtagta accacccatt cacttttaaa tgctctccac
      241 acttcaatgc acagacctaa ttacttttct gcattcccaa atccactttg cagtgctgca
      301 atcagaaacc tggcgttaaa atattttaga ctctaaggat caagactaat tatgggccct
      361 aagctgcacc ttttggtttc cttacgaacc cgcctgctcc ccaccagc
//
LOCUS       KCKM01001859             703 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29257apa ultra-conserved element locus
            uce-411, sequence.
ACCESSION   KCKM01001859
VERSION     KCKM01001859.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 703)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 703)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..703
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29257apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>703
                     /note="ultra-conserved element locus uce-411"
BASE COUNT          229 a          120 c          122 g          232 t
ORIGIN      
        1 aataatacac tatgagatct gttgtacatc tttaatatta aacacaactg aggatataat
       61 cacaggaata ataacagcaa cttccaaggt gtaaaactgt agtcaacttt cttcatgttt
      121 tactactaaa aagtgcaagg attgagctat aaaaacgcat tttaagtctt tctgtcagat
      181 ttttaacagc aagagcgcag agcactctat acattccaca gatctgcttt ttaagaatca
      241 acatggtgca taccatgtga actgtcacat taataaccct atgctgatat tcaaattttc
      301 tgtcttaagc taaagaaaga ttgaataccc tgctgttgtg tggccaagat tgaagaggtg
      361 tctcactgac attgttcaaa gtttatgaaa atatatgaat gctcaaatgt cattggcttt
      421 gcgcctccaa cagactgtgg ttttatgaga aatcagtctt ttaatcaaaa tgattgaata
      481 ccttaaggtc gaatccaaag atatcagtta atatctagaa acgtgctatt tctgcaaatt
      541 ttgccaagcc gtacatattg tggtgcattt taaagtgtta atttgtgcat tccatattga
      601 aaattgatct tgagttttag ctttttgtca agcaaaaaca tatggttaca agctctatgc
      661 attttacgtg acggctgttg aagctgtcac atgtgcaaac ttg
//
LOCUS       KCKM01001860             620 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29273apa ultra-conserved element locus
            uce-5022, sequence.
ACCESSION   KCKM01001860
VERSION     KCKM01001860.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 620)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 620)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..620
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29273apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>620
                     /note="ultra-conserved element locus uce-5022"
BASE COUNT          208 a          118 c          101 g          193 t
ORIGIN      
        1 aaaaaaatcc ttacaaaaca aaaacagtat tttcagaatt ccactctact gctttcagac
       61 tatttccatc aaccctctta ttcattttga tttatttcca tccataagca gactaacgct
      121 tttctatgct tttattgttc ttcaagaata ggccttctat tggagaaaaa taatgtctct
      181 acgaccacca ctttgctcaa tgcagatctt cattaatctg cagccacagt acaggctttt
      241 agcagcaagc acttttgatg ggaattgaat ttgatactgc attatggttg tagggcttct
      301 cacaatagac tgtgttcttt tctgtgtctg tgcacaatca gagagaccca attaaataat
      361 ttggtgcaat aatggagaac aaaagagtat gagggcttaa agtgagggct tcagcatttg
      421 tattctccct tttctgtatc atgttaatta atttgcctga aaaccaaaag aaagaacata
      481 atgtgaaaag catagctcat ctacaacatg gaggcacttt aaatgcagat accataccaa
      541 atcaaaatgt aacaaaggaa cattctttgc atttccataa gaaaaaaata aaataaagtt
      601 gccagctact gtggagtggt
//
LOCUS       KCKM01001861             677 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29289apa ultra-conserved element locus
            uce-365, sequence.
ACCESSION   KCKM01001861
VERSION     KCKM01001861.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 677)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 677)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..677
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29289apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>677
                     /note="ultra-conserved element locus uce-365"
BASE COUNT          211 a          132 c          129 g          205 t
ORIGIN      
        1 tagtcttttt gccatcatct ttttctttct gaatggtcaa cgatggaagt tcgtatttcc
       61 cctttttgct caagtaaaga cagtacagtt ctcatgagct gcaagcatga caatagtttg
      121 attcaaagca cagcatacag taactaagcc tgatattgaa aagcacaaca ctaaaacccg
      181 cctctgacac ttgataagat tattattata gagtggaaaa agcttttcct tttctgcttt
      241 tctgcaaacc tcgtaaggcc ctgctcagat ttctgcatag ttaatttgtc agtttataaa
      301 ttaccacatt acgttaacac tgaatgcttc aaaacacaaa tatatgcaca gagggcttga
      361 atatttgaag tgttttagta ctatagggaa ataattttgt tgtcaagctg tggcagatat
      421 agaagtgcta ggggatacat gaccatttca tcaggatggt gtcgatgatg gcctatgaac
      481 atccaagggg ggaaatcatc ttttatcact attgtgtacc atgcaggtcc agatggagga
      541 taaaacatgc atgagttgcc cgcagctctg aaaataatta tactcatttg ccagaaatgt
      601 agaaagtgca tccaaccaag ttaccaccca tcatagtgac actccttttg catactgatg
      661 aagcttaaag ccagaga
//
LOCUS       KCKM01001862             849 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29305apa ultra-conserved element locus
            uce-1539, sequence.
ACCESSION   KCKM01001862
VERSION     KCKM01001862.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 849)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 849)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..849
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29305apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>849
                     /note="ultra-conserved element locus uce-1539"
BASE COUNT          247 a          161 c          175 g          266 t
ORIGIN      
        1 ttaaatggct tgggatttgg tgcaaacaaa catgattgat agctggacag acatgctcgt
       61 catgaaaaaa gaaccatttc tgaagcccgg ttggggccaa acatttacca ccttgcttca
      121 tagtaaccag tcgagatgaa gcacgtcgtt agaacgttgt tggacaccgt gttgaaatta
      181 tcccccccat cggttgtgaa gaactgtgct acattcaggc taaccattga actcagtata
      241 tatatttttc cctcctgcct ttttgtctgg caggctactg ttcttgttgc tcttctgtgt
      301 aatgaagttt aaatgcttgt ttggaacact ttatttaaca gtttagaagg cttgatagaa
      361 agagtgcttt agtctgaaga gtatacattg gataggaaag tatttccttc tcttgtttct
      421 caagtctctc tccgccttac gtagctcgag atctttgcag cttggttcat ggattctagc
      481 cttgcccgtt gcgcagtata tatataaatt gagatgataa accaatgaac tatgtcaaaa
      541 gcactctcag tatcacattt gacaaaaagt tttgtacttt tcacatagct cgttgccctg
      601 caaaggggtt aacagcacaa ttttttaaaa ataaattatt tataggatta aaatgacttc
      661 atttgtatac atttggaatt aaaacaatgc aagaagtgtc gtgaaacacg gtatcactga
      721 tgcttttccg gagtgtcttg agacccaatc aaaagcagtg tctggaagga gctttacgca
      781 ggcagtgaag catgttttag gagaaactca ctgtccatct tcacagaaaa aaagaagtgt
      841 tcagagtgc
//
LOCUS       KCKM01001863            1038 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29321apa ultra-conserved element locus
            uce-2970, sequence.
ACCESSION   KCKM01001863
VERSION     KCKM01001863.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1038)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1038)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1038
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29321apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1038
                     /note="ultra-conserved element locus uce-2970"
BASE COUNT          289 a          204 c          207 g          338 t
ORIGIN      
        1 gaaaggacca tgtgatgtca ctgttgctcc aggaaaaact gctgaatgag atttatcagc
       61 tactaatata actattggag aaaactatgc tatgtcttcc ttttgcccct gattataaca
      121 gtgttttgtt catattaata cagttcctag tcattgcagg gatgatccat gatctccttt
      181 tcttaactgc tctacaaaca cctgatcttt cttctccatt gctgggcatt tcttaagaac
      241 tatgtttcaa agaaatgtga tacacttctc tggacttagc agtgagagag gctcctgcct
      301 ctcttacaaa atgctgtgta catatatgtg tttccagatt agttcacgta gactaaactg
      361 cctttaggtc tgtgagagag acttaaagaa tgtccttctg gctttaaaag taaaattttg
      421 ttaaatttct tttcaattgg aaacggaaga gttccaggca taatcgtttt tcctatttta
      481 tgtagatttt tagagcaagg gatctgcagg tacggtgcac agtgtacttc agcacattcc
      541 caggaagagc taacagaatg gcaaaaacga tatgcttccc gcttgatcag attaaaacag
      601 cagaaggaaa acaaacaatg ttcgggcagt tatatggaaa ccttgattga gaaatggatg
      661 aattcgttat ctcctgagaa agtggtaagg aaaacatact acttccctat gtgctcatat
      721 ttaaaactaa cagatgagcc tgtttttggc ccttactatc agagctggtc gaattactcg
      781 ttaccaagaa attgtccaac caatttactc ccctttccat cctgccctat gtcttcttgc
      841 aaagataccg gagactctgg ctgatttctg cagtttcttt tcaggaattg agtagagttt
      901 gtgaattaca gcttgtgggt caatcactgg ttcctcgttt tgcgtattta ctattcccag
      961 tgcaggatgg gtcggccaag tctcatggta ttgttcctgt tccttaacta gatggcagca
     1021 gttttttaaa ctggagaa
//
LOCUS       KCKM01001864             282 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29335apa ultra-conserved element locus
            uce-886, sequence.
ACCESSION   KCKM01001864
VERSION     KCKM01001864.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 282)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 282)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29335apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>282
                     /note="ultra-conserved element locus uce-886"
BASE COUNT           91 a           45 c           52 g           94 t
ORIGIN      
        1 aaaattaaaa aaaataatta aaaagcgcct cggtttttaa agcagaagtg cataatgtat
       61 taattggttg ctattagcat gcaattttat tgagcatagc acacagaagt ctgattgtga
      121 gcgaggagtg ttttcaatga aagtggagtt attttagctg cagacatgtt tacatttctg
      181 tggtttagtc tataactttc tctttttctt gcttcagaat tctgctccat gaagcaaagc
      241 tcttagctcc cagacattcc aaaaagtctg ccaaaataat ag
//
LOCUS       KCKM01001865             949 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29365apa ultra-conserved element locus
            uce-3799, sequence.
ACCESSION   KCKM01001865
VERSION     KCKM01001865.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 949)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 949)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..949
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29365apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>949
                     /note="ultra-conserved element locus uce-3799"
BASE COUNT          294 a          172 c          198 g          285 t
ORIGIN      
        1 agaaatggaa gcaaatgttg tcctagttcc ttggatcatt tacatgaaca caccgttcat
       61 aagtaagcta catagctgcc taataaagaa agagtgattc aggaggctat attttaaggt
      121 tagtagtagc taaattacag caatggttga cagttgtgtc tgctttctgt ctcagtagca
      181 agataagact aagataaaaa gatgagaaat agagagaatt aatatagaca tctatttaaa
      241 aaataaaata tgcagtatta gcagagcaag tcctgcttag ggacactttt aacagttatc
      301 aacaattctt tagaaaacag ccacagttta catgtgcagc cagttgcttt ctaattgcta
      361 cagcaggcta ccactgggaa gaacaaagga aatatttagc acatcgtaaa ttcttctgca
      421 gccctgccga gtggctggag ttcagattac acgtttataa ccaacgtttg agagcaattt
      481 ctcctccact ttgagaaagt gggtggggaa gctgttcaac actttcttca aatgcctgaa
      541 gtaatgtgtg tctgaaagaa attcgagttc aaaattctct tccacttgtc ttttgattta
      601 ggcttgcaac gtaccacaat tcattgaaac actcagaaaa cttttgttaa aaatcagatg
      661 tgccattgtt gttgctgtta taataactat tggcttccaa ctttgccatt cttgtggaac
      721 gtttttctga aatcttgcaa gccagtaagc gtttgcttcc acaaatgtga aggatcttgc
      781 aaatgctgca ggggggtgtg ctggtaactg gatgggaggt attagtctcc ctaagtcagt
      841 acttaatcat gtctgtgtct tgtgaatgag gtgttgaggc tctgacaatt gtaaagattt
      901 catgatctag cagaaaatac actggtgccc cgatcaaatc aagaccccc
//
LOCUS       KCKM01001866             610 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29379apa ultra-conserved element locus
            uce-2858, sequence.
ACCESSION   KCKM01001866
VERSION     KCKM01001866.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 610)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 610)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..610
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29379apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>610
                     /note="ultra-conserved element locus uce-2858"
BASE COUNT          163 a          138 c          123 g          186 t
ORIGIN      
        1 gctgccttaa tctcacttcg tgccattgcc ctctgatgag agaatcctct tggtacctcc
       61 gatttgtcat tgaagtgaag ggaagggctg cgtgcactgc ttgctcctat cttctgcggt
      121 gagtctacct tgacaaagtt tctcttgcta tctttagtct tctccctgga gcatgtagcg
      181 catcaggaca agagggatct gagccccaca gcttcatttg gacctgttaa ctgtaactac
      241 tgatgtcgtt tacaaggata aacccttaaa gccaggccaa ggtagacaaa gaacgaacac
      301 tggagtaatt ccctttggac agcagagatt ggtgttcaag ttattgaaaa tctgtgtaac
      361 tcattttctc ttttgtcata cttaaaaaat ccatgaagtt tggctgagtg caaacaataa
      421 gcttttattg ttgctgccct tcttcataaa tgtgtaatct tctgggacct tcagaaaagc
      481 tttggtacaa caaattaaaa gtctctaaac tttcctccgt ctccttggac atttcgtaga
      541 cctgcaaata tcaagcagta atcaatataa cgctgctcta atacttgaag gcaaactggc
      601 agctcctgag
//
LOCUS       KCKM01001867             555 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29395apa ultra-conserved element locus
            uce-350, sequence.
ACCESSION   KCKM01001867
VERSION     KCKM01001867.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 555)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 555)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29395apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>555
                     /note="ultra-conserved element locus uce-350"
BASE COUNT          182 a          100 c           90 g          183 t
ORIGIN      
        1 aatttcttca aatccagaac atgctgtcca ttttttagta attttttcct ctttgtcact
       61 gagcaccaaa gtattatctt taatgcataa aatatgcaaa ttcttaaagc atcattttgc
      121 tctttagtga gtttagatat tacaaaatgg tttaattata aaaacagaca gacctagtcc
      181 tgggacctgt gcagctagaa ataaatgtgc aatcaaaact gcaattacct gcagaattta
      241 gtgtaaacag atcagcaatc acataacaaa cacaggctag tttgcattct gatatgaata
      301 cagttagatc caaagcaatt ttcctttatt tatcttagct gctcagcata aataaagcaa
      361 gggcattgaa gcaattagca taattagagt atcgtggtca ggccctgtgt gatttctaga
      421 gacgtttcac tttagaattc tttttcccgt acaagagttt ccctgagaca ctaaaatatc
      481 gctttgggca tttttgtatt tcaaatttgc aagttgtcaa tttgaaaaac ccttgacaca
      541 cggatgtgaa agcat
//
LOCUS       KCKM01001868            1120 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29411apa ultra-conserved element locus
            uce-3981, sequence.
ACCESSION   KCKM01001868
VERSION     KCKM01001868.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1120)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1120)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1120
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29411apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1120
                     /note="ultra-conserved element locus uce-3981"
BASE COUNT          304 a          234 c          205 g          377 t
ORIGIN      
        1 ttaaatgttc ttattagtat tttcatactt tattttgata acagaaaact gaaggcagtg
       61 taagttgtgt gtgggtatgt aagtactgat ttttgcataa tgatggaaaa aataacccta
      121 ctttgccaac tgcctttctt caagttgtgt ggagaaggca aatttttttt ctgcttcagc
      181 aaaatgatgg aaaggtatcc aatccttcca catttgtgca gtagcctcta attctaagca
      241 cagtgacgaa ctgtaagtaa attttaccat agagctgtgt tttccttagc ctctccatct
      301 gctcattttt gacacccctg tcattaactg tcattttcct ttaaatatac agtgaagctg
      361 aaaggccagc tctacatcac atcatttcag attaggggca gttcctttga gctgaacact
      421 gtttaggtgt cagaaagaag tctctgacct ctctcgtacc acactgccgc agggccttaa
      481 ttagtactga ctccagccat tactgcagag aggacaaagg caaccacatc atttttctac
      541 ttaggaagtt agcgtctgac ctaataactt gtccaggctc gcaggacact gtaatggcca
      601 cacaatggca atggggatta tttgtcagat tctttcctcc tctaaatgta ggataatcgg
      661 ggaagttaac tattgtaccc ctcagtcttg caagggttgt tttattgtct cactctgttg
      721 atctgttgtg gagaaaatga cagaggagcc agatattcag gaaagtagga ggtgataacg
      781 tgtagagtgg tttttgtcct gcctagaagt gtctgataat ttaaaatatt gctcttctta
      841 caagatctgc tctggtgcta ttgagtttag tggaatttta ttacttattt catgaagagc
      901 aaactcaagt tcacaatcaa atgagttctt tttttttctc tcctccttct ctgatcccac
      961 ccttcttcat cccatccccc aatctcctag cagaaattca ctctcacatt agaaacattt
     1021 tacaatgctt ttgccacagc atttttggtc tatttcacta gaaattgcac ttattgcatc
     1081 agatgtcagc attatacagt tccacagaat ctccttaatt
//
LOCUS       KCKM01001869             645 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29425apa ultra-conserved element locus
            uce-1092, sequence.
ACCESSION   KCKM01001869
VERSION     KCKM01001869.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 645)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 645)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..645
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29425apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>645
                     /note="ultra-conserved element locus uce-1092"
BASE COUNT          196 a          132 c          106 g          211 t
ORIGIN      
        1 aaatattata cgagatttaa aagtcctgcc ataaaaaatt tgagagaaat gtcaagctac
       61 tttggagtat tttggagaat agcaaccatg gagacctgaa tgattttaac tctctctgtc
      121 ttcctttcta cctgagtcct ttccactttc tctccataat gccatgttgg agtacatcct
      181 gcttagcctc caatcaacat ttcaagcact gggatcatgt ttgatattgt cagatggcct
      241 ggaaaattaa aaacccaatt aaaggctcag cacgcgggtc agctcttctg catatcaaaa
      301 ggcctcctct ggctattctg ctcaaattgt atctgttaac agctcacttt gcagagagtg
      361 aaatagcgca gcgtttatga gtaataagta ccttccagct gatacatttc aaacacaaac
      421 cactttcatg gccctggcaa aaagtacaag tcataatcaa attgtcaatt ttttcctgcg
      481 agatgcatag atccattgta actgtgattg ttaaagaagg aaatgcattt tattcacacg
      541 ttgggaaaaa aagatgcaca ttttccctac aattaaagat tttttgtcac ttttttacat
      601 tgcctttcct ttacatttct aaatagttac tataattgat tttcg
//
LOCUS       KCKM01001870            1029 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29441apa ultra-conserved element locus
            uce-6410, sequence.
ACCESSION   KCKM01001870
VERSION     KCKM01001870.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1029)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1029)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1029
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29441apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1029
                     /note="ultra-conserved element locus uce-6410"
BASE COUNT          330 a          216 c          180 g          303 t
ORIGIN      
        1 tttcaaacat gctaatatta ttaaatatcg aaatatttgc cctcttgctt atcacgctcc
       61 acaactgaag agagagcaga tgcatcctga ctattaacag tcatgacaaa ttgccttact
      121 aatgaatgtt acacactgaa agtgccataa ctgattaaac tacaatttcc cactaccaga
      181 tagagagaga cttgggaact ccagcagtgg acaactctga tgttctgcca acaggccttc
      241 agggcacagt gtggtattta gaaaaacaca ctgtaaattc catatgaata tattctaaaa
      301 gactgtgtgt atacaacagg ttttaaagaa cattagatga aacagcttag gttcgtagtc
      361 gatgagccat gtaaaatgga tgtgttttaa caattttagt atcattacaa ggctgcgttg
      421 gggaatattt ctgttgggtg cctctacccc cccacctccc caaacattgc tttcacataa
      481 aatctttctt ttgtcagtct ctttgtcggt gcaaaattgg cagcagttca aattcaaagt
      541 actcctattc atttactgac cattaaacca atgtcattct agttcacatc agccagagag
      601 ctaagctctc ataaaaggct tgcttcacca ctgaggaata atgtgtacat ttttacagag
      661 cttaaacctt aatgctttgc ctgaaactaa caatacagta tatcttatca ttcctttttc
      721 acaagcaggc agctgctgaa acgcttgcca cttcaaaata tcaattgctt gccagagttg
      781 tcctcaacac accctgtcaa actcgtgtat attgtgcaat gaaaatggtg caggactgag
      841 agctagaaat tgtgtcaaat tctgctgtaa gggtatgatg tgcaaagaac aacgtatgac
      901 aaccgtagag actacaaaca atagcaatgg agccagacac tacatatatc acaactctgc
      961 ctctacgtat tttattgtat gcattatata tttaaagcat gacaaatgtg ccattgaagc
     1021 tatgtgcta
//
LOCUS       KCKM01001871             509 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29457apa ultra-conserved element locus
            uce-5294, sequence.
ACCESSION   KCKM01001871
VERSION     KCKM01001871.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 509)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 509)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29457apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>509
                     /note="ultra-conserved element locus uce-5294"
BASE COUNT          163 a           92 c          118 g          136 t
ORIGIN      
        1 gtgggaagaa gaaaagggtg gaaaagagtg gtggtagaaa gagagtaatc acagccaatg
       61 gtgtttattg gatgatatta aaggcatggg aatcgctctg caggctcttt agcggtctaa
      121 atttagaaag aaggcaaaag ggagaaaagt tgaagaggtg cagaagattt cttcctggca
      181 gctgggctcc ctgcagttga ctaaccccac tgctcaacag tggtcatagt tgctttggag
      241 aatcacgtct cagctctttt ctccacacac accccctcca aaagcaagga aatggatgtg
      301 cattgatgta atttagtacc ttggagacgc ggacaaatta gtgtagaaca ttatcactag
      361 ttaattatga atgaccgatt aatcaaccta atctaatatt ccacattatg ttgatgttat
      421 taaagtgcat catgaaaatg acagatcgtc ttcatttgcg ttctttggcc aaatgtgcac
      481 tctacagtca tgatgtccaa agaaacaaa
//
LOCUS       KCKM01001872             916 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29472apa ultra-conserved element locus
            uce-7466, sequence.
ACCESSION   KCKM01001872
VERSION     KCKM01001872.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 916)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 916)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..916
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29472apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>916
                     /note="ultra-conserved element locus uce-7466"
BASE COUNT          152 a          350 c          213 g          201 t
ORIGIN      
        1 aagcagagtg tgtctgtgcc atgtctcctc tcctttggag ccatggagga gcgactggga
       61 aaatctgagg tcagtaagtt cgaaggtccc acattccctg agctgcccgc gcgctgcacc
      121 gccaagggcc ggtcaccgtt tgcctctgca gcactctcag ctttcctctg gccagcggca
      181 ggacagcccg ctgccctgta actgcacccg cacgaggggt ttcctctgca tcccaccttc
      241 ctccggagat gcaggaaatc tccccctgct ccatcacgcc ccatcctgga ccacggcctg
      301 gcgcacgtcc ccatcactcc tgccacgtgg gtcgcccccg gctcttctaa caccactgca
      361 tttaacaccc gttttcttct gcctcttgtt ctctctttcg gtcacttatg gctgcttctg
      421 ctcggcaccg cgtaggcacc gagagcgggc gcagctcccc ctactatagc cagttagatg
      481 tgaggtcctc cactccaacc tcataccaag cacccaagca tttccacatc ccaggtaggc
      541 tctggagcac cccggtccct ggggatgcac cgtgtctgtg gcatgcccgc atgtgccgtt
      601 ccccctgtgt cgcatgtgta gctccgccgc ctgcctagag ccagctggca gcaggatcta
      661 cccctggtag aggccatcca taaacaggac ctgcagcttg aaccctcctc tctccccatc
      721 accacccgga cgtcccagag ctgcctgggg tctgcttgat ccttgcaacg tcccttcttc
      781 tccttcttcc ctgaccttcc tccacccccc acacaaagac gagtcccctg cggagagcct
      841 gtcccttccc ctgcctcccc ctcaggatca cgagccgaag cgtgtctgcc agaggccttt
      901 ccggacccat ccgcta
//
LOCUS       KCKM01001873            1114 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29488apa ultra-conserved element locus
            uce-2088, sequence.
ACCESSION   KCKM01001873
VERSION     KCKM01001873.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1114)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1114)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1114
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29488apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1114
                     /note="ultra-conserved element locus uce-2088"
BASE COUNT          315 a          256 c          259 g          284 t
ORIGIN      
        1 ggtgacaacg caggggtaag catactctgg taccaccttc ccagaattag gaatcgaagt
       61 aactctagga atttagctcc caagtcacat ttgaaatggc acaaggtcag attttttgat
      121 agtgcctcga tttcccacct gcagaatggc tcatcctcca gaggtttaag gatgttttaa
      181 tgacaaccga gcacttgaca ttgccgggac atgtcccgga caccagagaa gccttcgagg
      241 tagatccagc ctttaaccaa ggccttttgg gaactgccaa ccccaaagcc cagcagacac
      301 ctcaggcacc cggaaagctg taggaactct tttaatgtct gtccctgtag ttgtaacgcc
      361 tgtcactgca gttcacgaga gacaactaat caataaccgt ggaaccaaat aggcaaataa
      421 aaataaaatc cattaagatg gcagaggtat ttacttgttg tatttacacc acggagagct
      481 gcactgtcag tcagtgcttc cccttcacaa gatagaagca atttgtgcag actgatccca
      541 gttttctcat taatatgtaa atgaggcatg ccagttgtta ggttagaaga aagctgtcat
      601 gtttattgtg acagatttaa tggatgtgtt tggattgtgc attcaatgtg ttttcaagag
      661 catgtcttat ctttgtttag gcagtaaatc aaacatgtaa acaacaattc attagcatct
      721 gtcagaagct cagagctaca ttgttatagt tgaaaatctc cccagaggtg aaaaaaagta
      781 tatctgactt attccagatt agtttgaata ttttctttct gtttaccaac ttgtaagtaa
      841 taattgagct gctgaatcgg tgcaggggga tagcactagg ggtcaggcag aaaccagcca
      901 aacaccaggg acccagagct ggtccagaga ggacacagtg gccacccacc tctgccacca
      961 ctggggacct ggccggtggc atggccaggc ttggagtggt ggctttggaa cgtatttaat
     1021 gccttgggag gcgaaatctc cacctgggct gctgcagctg caccccacgg ctcctcacca
     1081 gcagctccag cccaacatgg ccaagcggga aatt
//
LOCUS       KCKM01001874             550 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29502apa ultra-conserved element locus
            uce-3114, sequence.
ACCESSION   KCKM01001874
VERSION     KCKM01001874.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 550)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 550)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29502apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>550
                     /note="ultra-conserved element locus uce-3114"
BASE COUNT          123 a          134 c          142 g          151 t
ORIGIN      
        1 caggagcttc ccggtatcgc tcgctgcgcc gcacagccaa gccatctgtc agcaaaacag
       61 gaaggcacgg gttcccttcc cctcctgggc ctgtttcgct attttcggga gctgtacttc
      121 tcccccgcgc tgcgccaggc cggtgcggtc tgaaggaagg gctcccgggc gagcgagggg
      181 ccaaagcctg gagctgctgc tctgcccatc tgctgcggct ggaggtgtat tcattattaa
      241 tggaggtagt ggcagttgct gctcagatat gcagccctgc ctgggtaaat gagacattct
      301 tcagcaaatt gcttcgtttt ttgattgctg attgtacgcg tgtcaccaag ctgactcaag
      361 gttcatcgat gcatgctcag taaattagaa agaacataac tatggatcaa ccaagagaat
      421 gaattctgtg cctacaatga cccagggcca tttaattttc tgcttaattt tgttgcagtc
      481 agtttgcatt ttgggttatt atgcagtagg aaattaacaa taaataacaa atttggtcct
      541 cctgtgcttg
//
LOCUS       KCKM01001875             578 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29518apa ultra-conserved element locus
            uce-7108, sequence.
ACCESSION   KCKM01001875
VERSION     KCKM01001875.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 578)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 578)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29518apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>578
                     /note="ultra-conserved element locus uce-7108"
BASE COUNT          168 a          103 c           95 g          212 t
ORIGIN      
        1 gattttgtct ttctgaaata aacgtttgct tatggatttt tttttattgt cacatccatg
       61 gcatttttaa agtaaatagg agtacaaggt ttatattatt ttaaatgtat attgtatttg
      121 tcttcccaac actgtggttt ttagtactgt gaataacgta gtatggagcc agcctattaa
      181 acagcctgtt tttgtaagga aactgttagt ccacctaata ttctattgct tactgtgttc
      241 ttccaatatg cttagcattc cacaacctaa atgatcattt gttgaacaaa ttcatgcttt
      301 tattagtcaa aatacagaga aaacagagcc cccctgtttc aagatatttg ctaatgcacg
      361 gttaattatc acatatagct tactataatt cattttacag ggagacctcc tgcaggtaac
      421 atactagcag tttatgaagc aaaataacct cactgtagat tagaactgtt tcactactgg
      481 tcagacagtt gctgcttcta ggccttctca cttcacattg ctaatttgaa caaggcttta
      541 tttttatatt tgtcagcagc aagactgtag catggttg
//
LOCUS       KCKM01001876             614 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29534apa ultra-conserved element locus
            uce-3051, sequence.
ACCESSION   KCKM01001876
VERSION     KCKM01001876.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 614)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 614)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..614
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29534apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>614
                     /note="ultra-conserved element locus uce-3051"
BASE COUNT          171 a          122 c          126 g          195 t
ORIGIN      
        1 ttttattatt gctgtttgat gatgtttctt atcttcagca attgtttatt cttttgaaaa
       61 gtccgtgtga gactgaccag acattaagga actctttcag ttcctttcta atggactgta
      121 gcttggatcc taaagacgaa tgctccattt catgacttta tccacctatc tacagtatgt
      181 tcccgagcta gttaaaatta aacttagcta tcaaaatgct aaacttgata gctcatttat
      241 ctttctgtct cccagctcta cattacaata cagcagtgat tgatcttgcg tcttcaaggt
      301 actatatggt ataaaaacta agagaagatt aattaaaagc cgtcgcatcc agacaggttt
      361 ttaaataagt tttagattta gacaatatat cagctgaagc agaaagattc tgagaccata
      421 agcctgtaac tccaagtgag gtttgctttc cttcgggaca tagaaaaacc catggcacca
      481 tgggctaaca tcaaagtctg atttggccag gcaggcctgt ggcaggaggc tgtcgcattc
      541 atgggctctc tctccagtag tggtgaatgt gatgtccttg aggacttctg ctggctcagg
      601 ggagaatgtc aggc
//
LOCUS       KCKM01001877            1003 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29549apa ultra-conserved element locus
            uce-883, sequence.
ACCESSION   KCKM01001877
VERSION     KCKM01001877.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1003)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1003)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1003
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29549apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1003
                     /note="ultra-conserved element locus uce-883"
BASE COUNT          240 a          253 c          252 g          258 t
ORIGIN      
        1 cccccttcag tcgcttggag aagctgtaca gcaccctggt gcggttcctc agtgacagaa
       61 agaacccggt gtgtcgagag atggctgtgg tactactggc caacttggca cagggggaca
      121 gcctggcagc gagagcgatc gctgtgcaga agggcagcat tggcaacttg ctgggcttct
      181 tggaggacag cctggccgcc acgcaattcc agcagagcca ggccggcttg atgcacatgc
      241 agaacccgcc cttcgagtcg acgagcgtgg acatgatgcg ccgagccgct cgggcgctgc
      301 tcgccctggc caaggtggac gagaaccact cggagttcac gttatacgag tcgcggctgt
      361 tggacatctc cgtgtcgcct ttgatgaact ctttggtttc gcaagttatt tgcgatgtac
      421 tgtttttaat tggccagtca tgacagctgt gggatccgag accctgtgtg cgtgtgcgtg
      481 agtggagaaa ctgactgttg ccctttattt atgcaaaacc acctcagaat ccactgtctg
      541 ccctgcgctg tcctgcttct ccctcgggga aacacgtccc cgttccctct ccccttcccc
      601 tgcccttcaa atttgtcctg aatcccttat taaaggagac aaagttctgt ctacgtagaa
      661 gacttttttt tattttaacc aaagttactg tcgtttacag tgagtttggg gaaaaaacga
      721 ctcgccgcgt tatcacattg acaggcacca ctttcataac tgtttttaat ggtaaactct
      781 gaaggacaaa agtgactgct gaactcttta tcgttgtaca ttcacaatct tgcaggaacc
      841 aagaagtttc cagttgtgaa cagaccttgt ccaagggagg cctgtgcagt agcgtgtaga
      901 acttcatgta ctgtacacct taaacatact gtaataacgt ctcacatgga aaaaaaagaa
      961 aaaaagctgg atcagcagca agctgtagtt tttaaaaatg ttt
//
LOCUS       KCKM01001878            1012 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29565apa ultra-conserved element locus
            uce-2040, sequence.
ACCESSION   KCKM01001878
VERSION     KCKM01001878.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1012)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1012)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29565apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1012
                     /note="ultra-conserved element locus uce-2040"
BASE COUNT          307 a          240 c          181 g          284 t
ORIGIN      
        1 atccttcccc cagaactata ctgcccattg catctcgatg cctcagcaca cctggacact
       61 catttatctt ctccagtaga gcctggctcc cctgtaccac ctaggaattt cacaccttgc
      121 aagctgcagc cacttgttac ttgtgcggtg tatagggaag gcaaaagcgg catttaccac
      181 gctgctgaag ttctgaatta acagctgacg gttttgacct ggctcccatt agctcccatt
      241 accacctggt aacagcctgc cttccacatg ctgtacttca cagatatcag ccattatccc
      301 caccccggat cagtccccag gcagtatgct aacagcctct tctacaagcc aatttacaag
      361 gatctggtca tgtttacatt agccttctcc caatgcatga aaagagaaga gcgcgcttca
      421 gaatagaaat gagcaaatat gaataattca attttccttg tggctattaa cacattttcc
      481 ttgaataaag tgataatagg ttatcatctg tgaaatggaa attgcataac agagagtttc
      541 tggttacacc agaggaaatt aatttcacag cacatctgct gggacctgac ttgtgaatgc
      601 taagtatgag aaaatgcagc cgttcggctc cgctaccttt ataattagat tagcatgcct
      661 gcacccatgc tggaatcctc agtctagtca aaagaattac tgtttctttc ttcggatacc
      721 taatatttgt aataatgaaa tgactgaggc aattagggaa agttaaaaat gaattatggg
      781 accatattat attaaccaga tgccacttta aagtgactga ctttgtgtta tctgtctagt
      841 taaatacagt acttcaccct actatcaata aatgtaatgt atcaaattag cacacacaca
      901 cacacccaac tttaagtaat gttaagattg tgacatgagc caacaaaagc tggggaatcc
      961 ccagcaaaga gtacaagctc ttcacattct tcactgagct tatcaaataa ag
//
LOCUS       KCKM01001879            1019 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29581apa ultra-conserved element locus
            uce-5886, sequence.
ACCESSION   KCKM01001879
VERSION     KCKM01001879.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1019)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1019)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1019
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29581apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1019
                     /note="ultra-conserved element locus uce-5886"
BASE COUNT          260 a          244 c          318 g          197 t
ORIGIN      
        1 ctccacatag tgtggagggt gcagaatccg tccctgcctg gcttggatct tctttgcggc
       61 tgagttgcag atgaaagcag gagggagctg tagctaaaga ggcacttccc ccaaatgcat
      121 atgggctgac atctcccaaa ttcaacacct acagcctcag gctcaggccc gcatccccca
      181 tgcattgcag agagatggag gagggagcag gggggcaggg aacaggcagc ccattgatcc
      241 cctgcgacac ccagtcccct tgcgagcgta atttatggtg taatttgggc tgcatccaac
      301 ttaataaagg gccactgcaa attagcgaac aggtttaaat gaagagaagc aattagagct
      361 cggaggagcc catcaaagaa gttgggccaa tatgagagtg aaactgaaac cgcaagccag
      421 gagcggaggc tggctggcgt gaggcagtga tgggaaggtg gcgtttaatg ggaaaggaaa
      481 ggaaacccta aatcataaag catgacaagg gccattgtgg gccagctgac aaatgaaaaa
      541 gaatggcatt attcctttaa ataacagcag cagttagaga gaagacagct ctccccggct
      601 tgccctcgct tccctggccc gctccgctcg gccatgcagg cggcgaagaa gaatcagagg
      661 tctttattaa ttattaaata atgactctct ctgcagcgtg atagataacg ttcaatctag
      721 ccgatggatt cgggcgatgg aggctaatct gtagcacagg agctctgcac ggggacagtg
      781 gcctctccca gtcccggagg ggagtgacgc aggggccgat tagcagcagc aggcagggtg
      841 ggcagggatt gcgggcggcg atggtgggca gtggcggcgg gcagggggat gccagcggct
      901 tgaagccttg tgcgatgcca ggtctggctg gatggcttgg tctaatgggt agcctcgtct
      961 cccattcccc cacctttcct gcctggagga gccgggagca agaacacatc aacaagagg
//
LOCUS       KCKM01001880            1059 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29596apa ultra-conserved element locus
            uce-7068, sequence.
ACCESSION   KCKM01001880
VERSION     KCKM01001880.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1059)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1059)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1059
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29596apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1059
                     /note="ultra-conserved element locus uce-7068"
BASE COUNT          256 a          211 c          231 g          361 t
ORIGIN      
        1 aagcaaaggt ttaaaaacaa aatagacaat aacatgggta ttagagtgcc ttttgtatta
       61 tgcctgttgc tatactgtga ctttgcagat agccagggtt ttgggtttag ctgaaatgct
      121 gaaagtcatc ttcacctaga ttaaaagcat ctttttcttt ctctaaaaaa gcggtgagtg
      181 gaaagtaaga ggtagttacg tgagagcacg gattagtttg gctgaaactc cagagttgac
      241 agactgttac atctaaaccc agtaattcag aggtttgagg ttgagagaag ttgaagaagc
      301 ctcacttata aattatgttc tgagttgtag ctactggtga ctttggaact gatgcctgcc
      361 tttggtgttt tctgtcttcg gactgggtct gcaggggagg gagtctttcc agagagttgt
      421 tgctatgaaa tgtgtttgtg ttgatcttta tgtggagaag ctattcacca ggtttaaacc
      481 tgtcctcccc tccttcagta agcgactctc ccaaccagct ggaggccttc tggactctat
      541 cactaatatc tttgggtagg ttagaacact ttcacctctt tgttttgtat attggtttca
      601 atgtgcacca aagtcttggt gatgcagggc atacaaacaa ataatttcag cctttcttct
      661 agcttctgcc tttttttttt ttcttttttt tgttctcctc aacttcctgt ttcttccatc
      721 ttgccgtgtg ctgacctctg acctttccct ccagtctgtc tgagtctccc cttttgggac
      781 atcaatcttc tgatgctgcc aggtgaaaat attctccgct cctcgtccag catgtgaatg
      841 tattccattg aagtaatgtg gaagctgcat tatcctgata agatttcaga tgttgataac
      901 actggataga aactatctac aattaggggg gcaatgagcc cctcttgatg gagagaacac
      961 atggggtttg ctcttacttt ccactgcact ttgctccttt aatagagtta tttaagaata
     1021 tgtcactggg ttctgtcctt agtatccaaa gtggagcca
//
LOCUS       KCKM01001881             636 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29610apa ultra-conserved element locus
            uce-4200, sequence.
ACCESSION   KCKM01001881
VERSION     KCKM01001881.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 636)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 636)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29610apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>636
                     /note="ultra-conserved element locus uce-4200"
BASE COUNT          210 a          133 c          111 g          182 t
ORIGIN      
        1 acacccatgc ttccatgtaa aaggaatgac ctaggtattt gcaaacctaa atgatatatt
       61 cctttgtgta atacttgtat atatttcaca cggtttctaa agcaccgata tggtagtgga
      121 aaatatttta taccagctga gcatttaaga gggaattcat agattgccct ttggtaaaag
      181 cccaggattt taatacactt actgttgttt ttaacaacag aacaatgcag caggcggagg
      241 tttagaccag cccgatatcc gtcctcacac cggctcctca gatagcccag gacatctcaa
      301 caaacacttg aaatgctacc aaaccctagc cgccacttca catgatttat gatgtcatta
      361 atgtcaagct atcagtggac aagagtaaaa gagacaacag caaagctgac taaaaacaaa
      421 tagttttgat taaactcaag gacgttcggt acagctttca gcaaaaaggc attcatcatt
      481 tccgaagctg accttgtttt tttcatccca aatgcaaaca taatacgtgt aggtatttca
      541 acagcatctt tgaagaagcc tgtagataaa ttcccttttt taagcaaaag taattaagag
      601 cagcagtaac acctttttct ctgtggagtc atttat
//
LOCUS       KCKM01001882            1088 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29626apa ultra-conserved element locus
            uce-6290, sequence.
ACCESSION   KCKM01001882
VERSION     KCKM01001882.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1088)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1088)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1088
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29626apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1088
                     /note="ultra-conserved element locus uce-6290"
BASE COUNT          266 a          260 c          264 g          298 t
ORIGIN      
        1 aagggctgtg tactggatgc taacgcagga gtaatgtctt tcctggcaat gtccttgcct
       61 cctattagat aatcaattag tctcagaaca ttaaaaagca aaatgctgca acaggatttt
      121 ccaccaaatt atttactaaa ggatttcatt gctcccgttt atttacatct aagcacgagg
      181 gccgtggcca tacaacataa tgctgttctt ttggcaccaa gacagctttg caaccttggc
      241 cccggaggac atctggagtc ttctgggttg tggcggctcc tttttgcaga aatttgcttg
      301 cctcaagtaa tgaatgagcc cattttcact ttgactgtgg cctgcagtct acgagagaca
      361 ttaggagcaa tttgtaggca acgcgcgggt ctgttccatc taaaatatta tcaatgagct
      421 tgtcaacccg agccttaacc ttctttgtta ttttcatctg ctcctctctc agatgtctct
      481 cctcgtaccc ataacctctg aagactagca acaggatgtc atacacctgt tttgctcaag
      541 gctgggactt ggagccctgc gcgatattgt gtcggcattg gctcgcttgc tgctttgctc
      601 aacgtatatg tcagaatgtc agatgatagt tgttgtatct gcagctgttg catgagcaga
      661 gtgccagggg cacaactttc ctgcagtgag ctttaatttg ctctcccctc cccgaagagc
      721 tcccgcgctt caccttgctg cgcagctgga ggagagctca gcccacgtgt agctcgggca
      781 gggagaccag ggagaaaact tcgtgcggga cgaaggtgct acaaattggt ctttgcatct
      841 ttgctcgacg aggcgtttcg ctaactgtcc gcacaaaagt gccgcgagca ccgaggggtt
      901 tatatcgacc cgcggtgggt ttggagactg ttccaggaga gattctcgta gcctaaataa
      961 gccataacct gccaagatac tgaagggaga tctgactagg tttttgactg ctctcagaat
     1021 taggttgaca atcaaaacag atgtggaatg aggctgcaac tggattgcca aaggcaaaaa
     1081 aaaactcc
//
LOCUS       KCKM01001883            1025 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29642apa ultra-conserved element locus
            uce-7011, sequence.
ACCESSION   KCKM01001883
VERSION     KCKM01001883.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1025)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1025)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1025
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29642apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1025
                     /note="ultra-conserved element locus uce-7011"
BASE COUNT          329 a          187 c          205 g          304 t
ORIGIN      
        1 acatagagca cttctgaaat tttttttaaa acttagcttt atatttttag caaatattaa
       61 cccaacttaa ggtctctttt aaaggttaca tttgcattta caaagaactt tcaagcaatt
      121 tagctacaat gaattttaac aaggcagctt cctgtccttg ctgcttacct atttttaaat
      181 tttatgagac tcttctggca gagttttgta gccgttaaga tgaaagcctg gatgcatgca
      241 tactttaaaa gtggtggagg aggaaaaaga agaataaaaa gaagaaagga aaataatcaa
      301 tttggtatca aatttattcc aaagccgaaa agtgcatttt tttctgattg tgaaagaaga
      361 catgcaggga ggtcaaaggt caagcaaaga ggagacagta ttgtgtagga actgtcacgc
      421 atcaccacct attttgacat gcacagggcc gtttgttgtc tgtcgaacat gcaaattaag
      481 tgcctgctgt catagctagc cgatatctga aagtggaaaa tgagaccacc tgtaaccagt
      541 gaatggagtg atggacaagc attcagagct cgtcatttcc aacgccattc acaccacctc
      601 cgaattgcat atgacatgta aaaatctttt cttaatattc acaaccggga agtttgggga
      661 attatggagg cttcaactgc tgcatctaat gggttctcca agcagacagc tgtgactgtg
      721 agctggcttg ataattaggt gtccaggaag attttatgct atgaatcagt taaaagggag
      781 aaaagaaaaa gaaaataatg gcaagcaaaa ctcgctggaa tggaaatcat attaaccctt
      841 gcatgccttc ctcagcactt ggcttttata actcctgtga agcaagattt gcagagatca
      901 gacacataat aatttgtctt ctgtctctct gcagcactgt cttcctactc agaaaattgt
      961 actccattcc tgtttgatgc tttgttttcc tgaagagaac ttagaagcac tatatctaaa
     1021 tatgc
//
LOCUS       KCKM01001884             370 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29658apa ultra-conserved element locus
            uce-4080, sequence.
ACCESSION   KCKM01001884
VERSION     KCKM01001884.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 370)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 370)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29658apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>370
                     /note="ultra-conserved element locus uce-4080"
BASE COUNT          129 a           66 c           88 g           87 t
ORIGIN      
        1 ggaaaaatct tacatttttc tgggaagaag gaggtggaaa agaggaaggg gggagggagg
       61 atgaagaaaa aaaactaagc gactgtcaga tcagctcagg atctccatta gaatgcagag
      121 tgctccagag taattacaaa acagctgtaa tggaaaattg gtagtcaaac ccattttcca
      181 ccaactagaa cggtgaatgg gctccattat gttcctaatt ctcattaact taatttgcat
      241 aggaaacaat gaaggaatac ctaatgagtt agactcagct aacagcagat cgatacccct
      301 gtgaacaggg gttcgaccca taattacagg acatgtggca aagccagaat gtttctcctt
      361 ttacataggg
//
LOCUS       KCKM01001885            1024 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29674apa ultra-conserved element locus
            uce-6210, sequence.
ACCESSION   KCKM01001885
VERSION     KCKM01001885.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1024)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1024)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1024
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29674apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1024
                     /note="ultra-conserved element locus uce-6210"
BASE COUNT          244 a          271 c          216 g          293 t
ORIGIN      
        1 cctttccttt attccataat ggcaaaacat gacatacggc agcttagcat ttccatacgg
       61 gtgtgttgct ccgctttgtt tgcgcaattt aaatacttcc cgagcagggc agctgggtga
      121 gagttaggct ctgaccgcct agaaccttta cgctcgaatt aaaccgtcct gtcgcttgag
      181 gtttgcaacc cggctctaaa agtagcagga tttttggtaa ccgacccgtt cgtgggccca
      241 gactagggtt taagtctgca acgtggtttt tgcagggctg agtttacctg ttgcaggtga
      301 gtgaggtcct ggcaggtcag ggtttcgagc ttcccttttg ctgttgaaaa ataacacgtt
      361 aggagtattt gttagctact agatggttgt actgatggct tgtttttcat tttttttatg
      421 ctttttttgg tccatctatt aataaaaatg aacccgttac agagtcacca tcatgtctct
      481 tctcaccacc ctgtgagtct gcattagcca gtcaactagc cctttcggcg gcaggtgacc
      541 agcgcgcccc atcctgcttg gctggggtcg tttcacatga cccaggcatg gccactcgtc
      601 aggttgcacc gccctttggt tcccgagcat gcgggtttct ctcagcctcc tctccaacct
      661 taaccaaatc ggcagcagcc acctcgaccg cccacacatt cccggccaat cagctcagct
      721 gtttatttac caaatgtctt cacaacaact acagcagcag ccttcggcta acaaaaaagc
      781 aggaaaaatc cacaacaccc ccttcgccaa ccaactaaat ccaacgcaac atctggcaaa
      841 accttttcag caaattcttc ttggcagtca gtccggcagc ctcacctcac catttctagc
      901 ttgttgaaac caaaaactag taagtttttc ctgcttatac agtttactgc tggttaaaat
      961 aaggagtaag cggcttataa gtaattactt ttctcaatca aaggctggct gtgcataatt
     1021 gagt
//
LOCUS       KCKM01001886             393 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29689apa ultra-conserved element locus
            uce-5986, sequence.
ACCESSION   KCKM01001886
VERSION     KCKM01001886.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 393)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 393)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29689apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>393
                     /note="ultra-conserved element locus uce-5986"
BASE COUNT          130 a           81 c           71 g          111 t
ORIGIN      
        1 atttacatca attaatttca ggcccctgat gtaaaccaat tagtattcaa cacttaatgg
       61 agtcattatc tgtcagatta gcttttagaa atgcttgtca ctgctacagg accaggcagc
      121 agaactttgc taataaaact agcagaatta atggagtgaa cagcatagat aatgacttaa
      181 tgtggaacat gcagtatcga aaagagactg agcaactgtc ttcaagaaat gaagacatca
      241 ttgagctagc tactttattc caaaaatgag ctcagatggt gctcttcaga aatatcaaag
      301 gtgcctagcg aagcctttgc aaagttgtgt tctgcaataa ataaccttca gcctttgtgc
      361 cctcacatac tcacaatcta cctttccagc tcg
//
LOCUS       KCKM01001887             842 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29705apa ultra-conserved element locus
            uce-74, sequence.
ACCESSION   KCKM01001887
VERSION     KCKM01001887.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 842)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 842)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..842
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29705apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>842
                     /note="ultra-conserved element locus uce-74"
BASE COUNT          262 a          145 c          146 g          289 t
ORIGIN      
        1 tgcagataaa actagttcgt acttttgaat tgctactact ttatttctgc tgagtggatt
       61 atttacagga ctacagcgtg tttgaaaatg aatagcaatg ttcttttgtt tcattttatg
      121 cagttctgga gaccaaagga gactcaggaa ttaattgtag ccttctaata aacacaatga
      181 tctaacgacg tatttaacat tactgttttt tgtttgattc caaataaact gcagagatgt
      241 gatacgaaaa caattaccat tttgaaaaag gataattaat ctacaatttt ttcacattag
      301 atcatatatc tctaaagagt gcccacagat ttgatggtct tcagctgctg tgtatttatt
      361 tttcattttt tctagtgatg taccgcccca tcagtgctga catttaaatg agtgagtatt
      421 caacacaaat gtgatcattt gtatagcatc caatgcggca ccatactgag atgattgctt
      481 ctgggagcca tccatgggtt ctcgaatagg ggggaaaagc caggcaaaat tttatcaatt
      541 tacatttttc tgtgattaat ttttatgcaa ataagggccc gaccgtgctc ccatctcacc
      601 tgaatcatgc ggatcatcaa agacaaattg agcatcactt atttaaaaaa taggctttaa
      661 actactctac agctgtgttg gaaaatgcta agagcagggc atgaactttt ctaatgtaac
      721 aggaatggat aagaaaatgc ttttttttgc atttttgtcc acactgtgat aaacatgaat
      781 cttaacaaaa tcctaaaaat tgtctttgtt ttatattcct tatgcccttg taaacatttg
      841 ac
//
LOCUS       KCKM01001888             631 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29721apa ultra-conserved element locus
            uce-5812, sequence.
ACCESSION   KCKM01001888
VERSION     KCKM01001888.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 631)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 631)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29721apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>631
                     /note="ultra-conserved element locus uce-5812"
BASE COUNT          210 a          106 c          123 g          192 t
ORIGIN      
        1 atgctgttga ttttgctgtt tagagtgaca gattcattga aaagctaggt ccagagctaa
       61 aggcagaatg ttcaggaagg gaaggtttaa caagtcctac taataagacc attatttcca
      121 tttcctaagc aggctactgt agatcttact ctgcctggga gctggataaa aacagccagt
      181 taatgtacta aaggtcaaaa tttcagaagt gcactacaaa tgcattacaa ccaactatta
      241 ataattctct ccttttttta aggggtctgg tcatgtctaa gggaatgcca gctacatttt
      301 tcttaatgta tgagcacaag ttacacataa caacctaaca acacaatact gcctctttaa
      361 tgctaatcta ttccttgcaa tctactagat acatgtagaa tcattggtgt gtatcaagag
      421 agcaaaatca gattctgaaa atatctgaaa ggatgcacta gagtgtacat aataatgtat
      481 tttaatctgc caggccttaa aattaatcat gaattcccac agagatttta ataattttga
      541 gatgatgttc atatagtgat attcttggac agagttcttg aaatgctaca tagaaatggg
      601 tgggggaggg aagaacaggg gccatttttc a
//
LOCUS       KCKM01001889             642 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29737apa ultra-conserved element locus
            uce-2765, sequence.
ACCESSION   KCKM01001889
VERSION     KCKM01001889.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 642)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 642)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29737apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>642
                     /note="ultra-conserved element locus uce-2765"
BASE COUNT          152 a          152 c          162 g          176 t
ORIGIN      
        1 cacacaacaa caaaagctat ttatagcaat aacagttagc agcgatacag cagcctcaga
       61 caggggtagg cagcgtctca ccatgaccac ttttgcactg aatgcctctg tgaaaacaaa
      121 agagcaaaaa tcaaagcaaa accgaaagaa agatcttttt attgctatgt tttactttgc
      181 tggcagacca gagcaaaggt tttctgaaca tttaaaagat gaaaaaggtg aagaatccca
      241 gaagcgattt atcttgaagc gagataactc tagtattgat aaagaagaca atcaggttgg
      301 ttctcggttt gagagttgct gaaatttgtt ctttgaaggt ggactgactg atgttattgt
      361 tgttcttttg ttgttgctct cctcctcctc ccccctcctg ccctgctcct ttggcgtccg
      421 taccaccgtg ggcagcatcc agccccctgg cgtggccgct tcagccgtgg cagcgtgtgt
      481 gtgcgtgtgt gggtttgcat gggcggtttg cttggcgcag gacttgctgc atgcccatgg
      541 gaggggaatg ctggcggctc tgggctgtgc agaacgctct gtcagtcaca tttctcgatg
      601 tctcgcctaa cttactggcg gttgttccac tcccctgcag ct
//
LOCUS       KCKM01001890             405 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29753apa ultra-conserved element locus
            uce-4761, sequence.
ACCESSION   KCKM01001890
VERSION     KCKM01001890.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 405)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 405)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29753apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>405
                     /note="ultra-conserved element locus uce-4761"
BASE COUNT          105 a           70 c           72 g          158 t
ORIGIN      
        1 acaagcatat ttgattatgc aaaagttaat ctgtcctgca aaaacctatg cttcagtcaa
       61 tgaatatcag cctggcaagc ggttacttgc tggctttttt tttttcaatc tgttctgcat
      121 agaaattgga ttgtaagcag tgtaataata aggtgttttt tgaattactt gtcttctgtt
      181 ttgtccttgt agatgacagt ttgatttaca tggatcctca ttactgccaa tcttttgtag
      241 atgtcagcat aaaggatttc cctcttgagg tagtgtggat atagacctgg cactgttttc
      301 ttcccatatg aatcaaacac taattattta gagatgttct agctagctgc atctttatgg
      361 ttttacagct acatgttatt tatcaaagtt ctgcccttct ttata
//
LOCUS       KCKM01001891            1036 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29767apa ultra-conserved element locus
            uce-3772, sequence.
ACCESSION   KCKM01001891
VERSION     KCKM01001891.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1036)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1036)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1036
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29767apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1036
                     /note="ultra-conserved element locus uce-3772"
BASE COUNT          336 a          216 c          186 g          298 t
ORIGIN      
        1 taggaagtac ctgtcttctt ttgtttacaa gattacatct caaacaaatt accacagtaa
       61 gcctaaatag gtatatgctt atattcacaa gtttcaggcc cattgctttc atttaaaata
      121 caacatgtgc tttcagtgac ttagattaac aagatgatca gaacaacttt gaagtacgac
      181 gcatgaggaa tgcaccatcg acacagggtg ttttcttcat tcaggtatat ttctctttat
      241 gcccgtttta aaacttcaca aaccttagct ctcaggattt tatttactaa catcttttag
      301 tcctaaactg ctcaaagaac ttgataaagc tgacgttcca aacaaagacc acgcttcctg
      361 ctctcattcg gaacctggaa caccatcaat gttttgttcg gcttgcataa gtcacaactg
      421 attggccaca gtccctgtgg gcatgccgtt tcatccagac tggacggttc attagtcata
      481 attactataa ctgtacagca gagactgcag ttttatctca tcatacatct ttgataaagc
      541 tgcttctatt tctgcttcat cagcatgtga agttacatta ttggaggttt tattttccaa
      601 tctgtgatta acagtgggcg ctctgcttac ggaacgcgta ccaaaattca agataatgta
      661 caaagtaagg ccacgacgtg accactgttt gaactttgtg cgaaaaatca tgcagcggtt
      721 cttgctacac aggaagaata gattctgaaa tgacagagtc gctaagaaaa ttcaacaaag
      781 aaaataccag caatgcagtt tggaaaagag taagactgtt tctaacgcaa accgtgacac
      841 attagaaaaa tctatcagat cggtatgaag gttagacatg ggaaatttct gacaactgct
      901 gggtcaatca gcatttttca tacagtgttt atacaactgc agaaaggtaa agcctacaac
      961 ataaagaacc tcggtgaaaa ctgacagcta aagcactgca ctacagtcag caaacagatg
     1021 ctaaaacact taaatc
//
LOCUS       KCKM01001892             936 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29783apa ultra-conserved element locus
            uce-1319, sequence.
ACCESSION   KCKM01001892
VERSION     KCKM01001892.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 936)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 936)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..936
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29783apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>936
                     /note="ultra-conserved element locus uce-1319"
BASE COUNT          303 a          158 c          203 g          272 t
ORIGIN      
        1 tcacacatgt aattttcatg cagtatttga tctttggaat tacaaggcac atctttaatc
       61 aaatacttaa cttgattgag aattagcaca tgcaggattg tagatactga taatccagat
      121 gttggtatca aaaaagaaca atatgcttat tcgtatttgc agtaataaaa cttgccttcc
      181 actttatgga acagcgacag aagatcaact ggccttggaa cagcacgtgg taactatagg
      241 gagactttct gctatgacaa ttatgttgag gcataatgtt ccttgaattg tgacatgcag
      301 aaattgcatc tccgtaattg tgattgagga agattactga aggttttatg ttcattttgt
      361 gatagatggc tctttccttt gcagccaaac aggcaaaaag ttaatggcga agtgtcgaat
      421 gcttatccag gagaatcaag agcttggaag gcagctctcc caaggacgta ttgcacagct
      481 tgaggcagag ttggctttac agaagaaata tagtgaggaa cttaaaagca gtcaggatgg
      541 taagggcttt tcttaagaaa atggaagttg ccttgcactt ctgttagttt aatttcctaa
      601 tgatatgcat actgtaaacc catctttgct ggaatgaaag ggcaatattg agtaaaatac
      661 gacaattgga tgtcttcact ggtagtctta atttaaaaaa aaaaccccac agaaatcacc
      721 aaccaaaaaa accagcaaca gcaaaaacta aaccaaactt aactttgggg gactgtcggg
      781 atttgcagct ccactattgc agtgcttgaa ctcgaaattg ctggattttg tactgtaggt
      841 cttggtgttg aatagggaat gtttaaactg cacacactgg tgaattggta agatgaaagc
      901 ctgttaatgc tgcatgatgc taagcatgca ctgaga
//
LOCUS       KCKM01001893             978 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29799apa ultra-conserved element locus
            uce-7589, sequence.
ACCESSION   KCKM01001893
VERSION     KCKM01001893.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 978)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 978)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..978
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29799apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>978
                     /note="ultra-conserved element locus uce-7589"
BASE COUNT          252 a          185 c          253 g          288 t
ORIGIN      
        1 tctctttatt tgcttggatg tttggacctg tgaatccact cacctgcatc tagtgtcctc
       61 tcaggcattc attcagcttt gtctggtttg cactagccat gtatttggtt ttgttgcatt
      121 ttttcttgca aaagtaattt tcttacagtc ctggatcctc catactatgg aatgattatc
      181 gctgtcaaat ctggagatgt ggcagcctgt gatcactgtt aacagaatag ctggtagaac
      241 tcagaaggaa actggccatt ctgtttcgcc atgcagcctg tatgttcctt tgctctagtg
      301 tgatatccac tagaggacca tgggaaaggc ttggtttggg acagcagtaa tgttatattt
      361 aagtattctt ttaaaaaaag aagaagggca agaagtttct ttagtttggc gtgttctatc
      421 agaggcgaga taatagaatt tctaaaccca ttgattttat ggcattaaga atctgcttga
      481 taagtcagtc tctgtacact ggcgatcgct atctccagct gtataagcag tactgtcccc
      541 atttcatttt caataagaaa ttgagggaga cttagctttg ctggaaaata gggggaaaat
      601 aagtagcata aaatctctgt tctgttgggg tacggcatag ctatttgtta ttaaatactg
      661 taggggtcag acagaagcag agttggaaga agtgtgagga aagaatcctt aacatgagtg
      721 ccaggttctt cagtagctga tgctgggggg cctgcacgtg agcactgctt ggaggggctc
      781 cagcactgcc tttaccctgg gcagcctcag agggaacagg cagggaagct tcatacagga
      841 ggtgcttaca gctactctga gatgtatgtg atcagcccag gcatggccgc tgccaacagg
      901 aggtgttgca aggaaagggg caggaactgg agcggtgagg agatcccagt tctttgcagc
      961 cctgtatgca aagaatgt
//
LOCUS       KCKM01001894             367 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29815apa ultra-conserved element locus
            uce-2066, sequence.
ACCESSION   KCKM01001894
VERSION     KCKM01001894.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 367)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 367)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29815apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>367
                     /note="ultra-conserved element locus uce-2066"
BASE COUNT          125 a           65 c           51 g          126 t
ORIGIN      
        1 atgtattaaa cattaagatg atttatttta ctaaaaattc tgctcatgtg tatgctcact
       61 tactgctata cattctagat aaacagatat taatttcata attaaaagta atcttgtgta
      121 aataccctgc aggcctcaat gaatcaaaca catactgtgt gtcaggcctc ccactgtctt
      181 caagtggaat gtactggctg gataattaga tagtacatat tttttaacct tatttgcatg
      241 catattatat cttttgcaca ttgacaagca gcagtaacaa caaaagtcag attaccacag
      301 ggaattccca caaagaagtc ttcatttctt ataatttgca gcctaaatta aaataatttg
      361 atctttg
//
LOCUS       KCKM01001895             925 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29830apa ultra-conserved element locus
            uce-2166, sequence.
ACCESSION   KCKM01001895
VERSION     KCKM01001895.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 925)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 925)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..925
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29830apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>925
                     /note="ultra-conserved element locus uce-2166"
BASE COUNT          252 a          200 c          208 g          265 t
ORIGIN      
        1 ctctgcctgc atgggtgggt ggcgaggggc tgcagcacgc ctgatcgctt gggaatcctg
       61 gcacttccct cactcattcg ttctttcaag tagcgatgaa gttgtttggc tggatccttt
      121 atgaaagtta aaattggttt gtcattttct tttcgcttct cacaccttat ctagtttcta
      181 cattcttccc acttcactag tcaaagtgat tgaaagccga aaactgagca gatctgtccc
      241 tgcagcaact ttcctcacgt ttctcattta ctgttttatc aaacaggctc tttgtctctg
      301 cagtcccctg atgttgcctc tgttacacgg agatattctt caggtcatgg gggttaaaag
      361 ggggctaaaa aggagatcat attggacttg ctttacacag acatgtagca ttagacccaa
      421 cgcccaatag aggaaagata tactactcct atttgatgag cagcaggcca ataaattcat
      481 taatcatcat tttatgcctc atcaaacact tcccaagttc ctccatggga gttatacaaa
      541 ttagccactg aaaaggcagt aattttagtt tagctaggta agtgcttttt gattgccttc
      601 ctgaacaatg cttcccttga caagctaata aatcagccct ttctgaatca gaagtgcagc
      661 aagtgcgaac aataactcca catagtttct ccactgattt cagctggaag gcctaagagg
      721 atgatctggg atcaaagtct cttactttat tgcagagcaa aagctttctt tatgaagaag
      781 agctacagag aaatgaggga aggggggatt tttttaatca attaatgaga gaaaaagtct
      841 tgaaacaaaa aggcctaagt ctccgattgt ggggatgccg ggaggccagc agggtggcaa
      901 gagcagccgg ggcaggagcg ggccc
//
LOCUS       KCKM01001896             289 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29844apa ultra-conserved element locus
            uce-2193, sequence.
ACCESSION   KCKM01001896
VERSION     KCKM01001896.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 289)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 289)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29844apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>289
                     /note="ultra-conserved element locus uce-2193"
BASE COUNT           93 a           53 c           69 g           74 t
ORIGIN      
        1 aagaaaaccc aaaaaacgcc aaaaaacttg cagagggaaa gagttaaagc catctgcctg
       61 aaagcattgt gtaaaacata cacacaatgt tggggaaata agccaattat gtgtgcttca
      121 caggaggtgg gggactgacc tttgtgtata attagttctt ttatttaaag caaagatttt
      181 gaatagaata actaattagc tgtcataaat ggcaaattga agattttggc cagattcctt
      241 ggggagtgtg ggaggacgtc cctcctccca gcccgcgctg tgcgctctg
//
LOCUS       KCKM01001897             344 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29858apa ultra-conserved element locus
            uce-6188, sequence.
ACCESSION   KCKM01001897
VERSION     KCKM01001897.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 344)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 344)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29858apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>344
                     /note="ultra-conserved element locus uce-6188"
BASE COUNT           69 a          115 c           63 g           97 t
ORIGIN      
        1 ttctggttgt gccctgctca gccgcccccg cggccgagca ggacccccct ccctgcccct
       61 tcgctcctca ggcttaacca agttacagtt tccccaccgc tctgcctccc tctcgccgtt
      121 ctttctcccc attatacatt ttgcatttct agcctgcttg tcatatttcc taccggattg
      181 ggtgtttaat taaaatcata attaaaattg atctcctcat taacatgcac ctgctctgct
      241 gctcacgtcc tggcatttaa ttatacgctg aagatgtcaa gtctgacagg cgagaacgag
      301 accccggcca gcaacctctg acaggacttc ctggtgacaa catc
//
LOCUS       KCKM01001898             973 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29873apa ultra-conserved element locus
            uce-4884, sequence.
ACCESSION   KCKM01001898
VERSION     KCKM01001898.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 973)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 973)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..973
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29873apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>973
                     /note="ultra-conserved element locus uce-4884"
BASE COUNT          311 a          187 c          188 g          287 t
ORIGIN      
        1 atgaaagaag ctttggagac atcaagtgtt ggccagcttt acctagaccc cttctgatct
       61 accagattca tcccagcact ggataatgtg ctgctacacc tgaaacttcc ccatgattga
      121 aggaaaaact tataaaaaaa ctttgctatt tttcatgtcc taatcagcct gagttatttt
      181 tagtggtcag aagagaaacc ctggaaggct tatgggttat agtgaaaatg gtaacagcac
      241 cacaaacatt gacatgaatg gacaaggact ttgattttac tttactactg gtaacataca
      301 gtccaagttc catcagatgt ttaagaataa actgcagctt ttatctagtg ggtgtttgag
      361 caccaatgag gagtaaatga tttgattttg tgagctctga ggatttgtca gctgcctcat
      421 aagtataatt ctggctcttc atattcctgc tgcttctaat ttagcaggac aggctcataa
      481 ttgaagcaaa ttaactattt acacttgcca cttctaccag gggaagagga cacatcagca
      541 ggaaagaatg agtgggaaat taaattcttc ccacttgtgt cagatctgcc cttatataaa
      601 cacattaaca gtaatttcat gaggcgtcaa acataggaat aaatactgaa ggataaaata
      661 atgaggtgtt gctattgagc tgaactgttg cagctaatat tactgtgcat gaataatgca
      721 gcttgagaga aggcatatgt tacagcactc aaacagtcac ttcatcagtt tcttgtgatc
      781 attaagtttt gggtcccttt ggtgaaccca ctcttcttcc cactgcaaga ccagtgtaat
      841 atttaagtaa acacactgaa acacatacac aaacatacat acatatgtat gtatgcagac
      901 tgagctgttc ataggaggcc aaattcattc ctgctagaat tccagttaag acactgaagt
      961 tacactagag att
//
LOCUS       KCKM01001899             870 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29889apa ultra-conserved element locus
            uce-6695, sequence.
ACCESSION   KCKM01001899
VERSION     KCKM01001899.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 870)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 870)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..870
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29889apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>870
                     /note="ultra-conserved element locus uce-6695"
BASE COUNT          237 a          114 c          186 g          333 t
ORIGIN      
        1 aagctttcta aacacctctc tagagcttta ctcttttaag gtactaatat cctttttctt
       61 gttaagaaat gaaaaataaa ctcggagatt taatgtgtct aattgaagtc ttttttttta
      121 ctggtgcatt tctattgttt gcttttgtaa cagtgggctt ttagtagaac ctattaaaat
      181 tgtattaacg taaagaataa tgatagctga aacacatttg ggtgaaataa ctaaatttac
      241 ttttgtatat agttgggaat attttctgac ttttgttttg aagggaaata agctgtaaat
      301 aattgggtgg gtgttgggtg gtttggttgg tttttatttt tttttgtttg gtttttttta
      361 attgagtagt tggtattaca ttttcactgc tgcttgattt tgtgtttgta gagccagaat
      421 gaagactggg gaggtttgtc tgaggatatc ttatgattaa gagcaatcta gggcaaaagc
      481 ccttttgaac ccccatctaa atgattggta actaccaagt ttaccatttt ggtggcatgg
      541 attaaatggg tgctatgcaa agactgctgc acgtgtaatt aagtccttgc aggggtgaac
      601 ggaaaatggg tgatgggctt aactttctgc aacacttgca tgatggtctt tgaagagtgc
      661 tttgagtgtt cccttttatt ttcctgtttt gtactaaccg catcaacttg aagtgtctga
      721 cttctactag ctttctttgg tgttgataat taagtgggat aatgcaagtt agagaaatgg
      781 ataccaaaac taataactaa acagatgttt ggctttgttt acttacaatc aacccatgta
      841 aatgtgtatt tactggaaaa tgagctgttt
//
LOCUS       KCKM01001900             552 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29905apa ultra-conserved element locus
            uce-2941, sequence.
ACCESSION   KCKM01001900
VERSION     KCKM01001900.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 552)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 552)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29905apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>552
                     /note="ultra-conserved element locus uce-2941"
BASE COUNT          164 a           96 c          105 g          187 t
ORIGIN      
        1 acagaaaata atgtttgtgg tcagtcccca gcaactatac tttctaatgc aaaccaattg
       61 catttttacc tgaaatatat gacagatagc taaggctcta atgtttttct ctgttaataa
      121 gctcgatatg gaacagagct cctttagaat atgtacggta aagtggaaat gcatgctttg
      181 gtgactgtta taaagcaggc caaagatatg tcaagtccaa ttaatgtcaa taaggaacat
      241 ctgtatttag gcacccaagt tacttaatgc aaacatttca taattatata ctatagcaca
      301 catggagcat tatgagatgt ggtgtcccag tgtgaataat attcacattt ttcagatcag
      361 tcagcagtct tggtctggct ttggctcagc ttgcagtctc cccgtaagag catttcttta
      421 taatattgaa ttaagtacaa tccacatttt ttctcttatc tgtgaaatct tgtggttgtg
      481 gcttaactgt ttctataaaa tgaaagatcc aagtgcatgt aaagctaggg gtttgggggc
      541 tttttttttc cc
//
LOCUS       KCKM01001901             896 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29920apa ultra-conserved element locus
            uce-5505, sequence.
ACCESSION   KCKM01001901
VERSION     KCKM01001901.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 896)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 896)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..896
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29920apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>896
                     /note="ultra-conserved element locus uce-5505"
BASE COUNT          258 a          165 c          156 g          317 t
ORIGIN      
        1 gtttaattaa ggaaaaaatg actgcactga tatttagcag caagactgtg aagcagcttt
       61 caactttttc ttctgtgtct ttctgatgca gtttttcttt tccttttcct tttctctctt
      121 ttttcctttc tgttctttcc tttccttttt ccttttctct tttttctttg ctgctgaact
      181 ttttaaaaga ggtctctaat tgaagagaga tggaagccag gcctgccaaa ggatggaaat
      241 ccataatatg gatgccagtg aacttattat gaaccataat gtccccaatg acaaaggaat
      301 caaagagaga accaccgtac ctagcagtac agtacaacac gatgaactga ctgaatgcag
      361 tattagattt cataggagca gtctctaatt agacgactaa gcgacgatgc atcggctgct
      421 tcttatcatt gcattttcca tctagatcag ttacagccat ttgattcctt aattgttttt
      481 tcaagtcttc cagatatttc ttaggttagc tacaatgtaa ctttttcagg gaatagttta
      541 agctttattc attcatgcaa tactaaagag aaagaaatac tgcatttttg tgctggcttg
      601 aacaatgatg aacaataatg aaggacaaat gaatcctgaa ggaagatttt ttaaaatgtt
      661 ttgtttcttc ttactaacgg agattttttt gtaccagctt taccagtttt cagccattta
      721 ttaatgcggg aatttatctt actaaagcaa tagtcgaagg gaaggtgcat attatcacgg
      781 atgcaattta tgttgtgtgc cagtctggtc caaaacatcc agtttcttaa catgagctcc
      841 agtttataac taaatgttca ctgactcaaa ggattagatt acacctgcag tatatc
//
LOCUS       KCKM01001902             410 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29934apa ultra-conserved element locus
            uce-5240, sequence.
ACCESSION   KCKM01001902
VERSION     KCKM01001902.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 410)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 410)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29934apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>410
                     /note="ultra-conserved element locus uce-5240"
BASE COUNT          165 a           60 c           61 g          124 t
ORIGIN      
        1 gagagcaaac ccaaattatg atattacagt aaacatttaa ctatttctag aatgtgaact
       61 taacatttta aacatctgtt agttacttat atgttgaaat atatgcaaaa atatttagcc
      121 aaattgaagt cttaggccca tgacaatcat ctcaacacag tgggtagttc tgaaaattaa
      181 tgagaatgat aatactgtaa agactgttcc agagtttgcc caaattcatt atctaagact
      241 cttgttaaga acatctcaaa gaattttaac caggaaaata tattaatggt tcaaaagcat
      301 ttttcaaaac ggtgatttat aaaagtataa tggaattata tatgcaagag ctatagttag
      361 aaacacaaat aacacaggag cagcacatta tgaaggaaca ttctccaata
//
LOCUS       KCKM01001903            1093 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29948apa ultra-conserved element locus
            uce-4117, sequence.
ACCESSION   KCKM01001903
VERSION     KCKM01001903.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1093)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1093)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1093
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29948apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1093
                     /note="ultra-conserved element locus uce-4117"
BASE COUNT          350 a          207 c          205 g          331 t
ORIGIN      
        1 taaatacagt gccagtgtgt catgttgtgg aagagaatac aaagaggaca aacaatgata
       61 acttaatcat ataaaatgac tcagctgaaa tacagtgcgc ttaaatacct atatgacaaa
      121 gaatgttaaa ttctgtattt agcatgtggt ttttttaaac ataaaatctg aaaatctttg
      181 tgcttaaact ttttttcctg ttaaacagaa ttagttgctt acttccaata ctgccactgt
      241 aactgatatt acaacggatc acaattttca cagacacatc aacattaaaa catttaccta
      301 tgagaaaata agtcacttct cattagttca cagtgcgaaa aagtggtgta cactctgtct
      361 tgagaaaggc tttcagttat tcatcaagcc agttgcagaa aagtcctgat accagatgca
      421 gtgctagatt taaagaatgg aaagcaacac atcacatgtt gggaggaaaa aaaataaatt
      481 tctcgtttct tcatggatat cgtctaagtg accttcgtct tctgttgtag aaatgcctga
      541 gcccatgttg ccgtgaaaaa ttcatcatgt aattttgttt gcgagtgctg ttaaaagcaa
      601 aggatggagg aagagtgtca gtttctttca aaagtacctt aaattcagag aagtgagata
      661 gataatggga cagattcttc cttctccttg caagaccttt caagcctgtg taaagtggtg
      721 taaagtgcac cctttgtaca acagcacggt acaaggcaat tgagaatctg tcccactttg
      781 cttttgttta caattcattg tcttagggaa aggctgagag ctttaagcta atgaaaactt
      841 ctgttgccta gggccaaatt cactaaaccc gtatgcactt cataccctct caatacaggg
      901 catttctctt ctgtctgacc ttctgtcttc actgttttat cttgagaaca gaatcagttc
      961 tatcttccac ttttagcata taggaaatga agtacaacac aggcttaacg tttccctccg
     1021 ttataacacc cccatccaaa attaaaggaa tatgtgggaa ataaggatcg tcacggttgg
     1081 gaggagacca ggc
//
LOCUS       KCKM01001904             275 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29964apa ultra-conserved element locus
            uce-5106, sequence.
ACCESSION   KCKM01001904
VERSION     KCKM01001904.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 275)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 275)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29964apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>275
                     /note="ultra-conserved element locus uce-5106"
BASE COUNT           59 a           91 c           65 g           60 t
ORIGIN      
        1 ctcccgccgc actccgatcc gcgccgcgcc gccgctccat ccctcccgat ggcgctgccc
       61 ggcgctcgcc tcccctctga cgcactttaa agagtctccc ccttcaacct caaggcgagt
      121 aatagcgacc aatcatcaag ccatttacca ggcttcagag gaagctgttt atgtgatccc
      181 agcactaatt aggctcatga actaacaaat cgtttgcaca acttgtgaag gggccgatca
      241 catccatgga ttgtctttgg acttagggag ggggg
//
LOCUS       KCKM01001905             670 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29980apa ultra-conserved element locus
            uce-3815, sequence.
ACCESSION   KCKM01001905
VERSION     KCKM01001905.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 670)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 670)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..670
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29980apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>670
                     /note="ultra-conserved element locus uce-3815"
BASE COUNT          196 a          118 c          170 g          186 t
ORIGIN      
        1 tgtcacagca gttgtattaa tcaaatgaag tagaggtagt tttgccaggt ctcagagcct
       61 cctccaatcc acctcaggtg gtcactcttg tcacgaagtc ctgtggcatc ctgagcaggt
      121 tatcagcgtc tgaccttctg cgtaagaaca gattgcaagt ggttttggct gagcatcccc
      181 agatatgcag tgggaaacac aatttcccaa aagacatggt gaagggagag gaaaggagtg
      241 gtctgaagtg gtttttaaag ctcttaattg ggggaaggag aaaggcaagg aaggataagt
      301 gttcagttgg gagaggaaag aaaaattgtg ttgtagtgcc tgggatacgg tacatctctg
      361 aaactgctga gagggatgta gtcatctctg caaatcaaga tgagctggct ggccaatgaa
      421 gcatgcccag cattttattt ctcatattgt ttggagatag ggattcagct gagtgcattc
      481 agcaaataaa gatcaaataa cctgctgtga ataatgtttt aaacccgggt tcctatcagg
      541 atctagttat aagcccatat actccgttgg ataaaaaata agttacacat ggctggaggc
      601 agtattactt tccatggaag atgaaatctg ttttgaaata gaaaatgttt agtgattccc
      661 cctccttttt
//
LOCUS       KCKM01001906             872 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 29995apa ultra-conserved element locus
            uce-1834, sequence.
ACCESSION   KCKM01001906
VERSION     KCKM01001906.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 872)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 872)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..872
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29995apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>872
                     /note="ultra-conserved element locus uce-1834"
BASE COUNT          260 a          133 c          152 g          327 t
ORIGIN      
        1 agtgaaaagt tctctttgaa tttacaaaaa tccatttaac agataggact agtacacatt
       61 agcaagcaag tggaatgaat gcactcgggt tttattttac aagtacttgt gcttgacaaa
      121 tgtgattttt tttttaaaga aaagttttct tcgaatatgg gctgggtaga ttgctgccag
      181 gttgctctgg ttttatacgt agtttttcta aatttgtttt taataccaca caatttgttg
      241 aagccttcaa gttctcttaa ttagacacca taaaataaca tgttttgtta acattcagga
      301 aatgacatca agtcttttgt ttttattttt tggctcaata gatttttaaa tgtatgatta
      361 tcataaccta atattgtctt tgtcttcact gcagtggatt tccgatcaaa cttttcccct
      421 tcttttaata ctttagggaa ttttcaaacg tcgggatgtt tggctgtaat gccccatgat
      481 ttgttctccc tgaaagaaat catagtgaca atttattaaa ctacagagca acctggcttt
      541 tcggggtctg caattctatt ttgtgttcaa tatacctagc attaaatctt gattcatttc
      601 atcatattat ttaggttata tttgtcatgc aattacttta gctgctagtt ttctggcttt
      661 ttttagaagt ctagaacagg gtttcagtat caaatcagtg gggcattact ttgcatgttg
      721 aaaaaaaggg ggttaaaagg ctaaaatcta aattgcacca gcagtagtgt atacactgaa
      781 tatgaagaaa ttgaaaacct aagaaggaac cgtattttaa aatatttaaa aggctgtgtt
      841 tctgtgttta ataccaattg ttcacaggta cc
//
LOCUS       KCKM01001907             852 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30010apa ultra-conserved element locus
            uce-6790, sequence.
ACCESSION   KCKM01001907
VERSION     KCKM01001907.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 852)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 852)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..852
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30010apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>852
                     /note="ultra-conserved element locus uce-6790"
BASE COUNT          237 a          151 c          177 g          287 t
ORIGIN      
        1 attgatctga ctctttattg caatttccag ttattaatat gattatggtg ttcttaatgg
       61 aactttaatt cctgtaatat cgctttttta gtacattcat ggaggtgttt ccttgattag
      121 tggtcagctt tgatctttac cactaggtca tgtcgaaacc tcagtgttgt atatggaaaa
      181 caggcaaact gcttttccct ttggatttta tgcagcaaat tagcaatatg taaataaact
      241 gaagtgagaa gtcagcaatg tgttgccatc cactaacatg catttcacgc tttttcggta
      301 tcattttaac agaatatgag tgattgcctc ctttccttac aggtagatct tgccagtttg
      361 cacatcaaga ctggtgccaa gaacatgccc acagtgtttt tccgaacaga tgcccaggtt
      421 ccagatgagt gctttcttgt gctgattaat gatttgttgg catcaagtga ttagaccaac
      481 aaatttcttg aaagatcttt tccaatgaca aacgatctgt ggtttcattg aacttttttt
      541 tttctttcag gtattcgtag agggagcttt taaagcggtt gactcatcca actttagcac
      601 tgagtccact gaggagataa attgctaaag ctaatcatgc ctaaatactt tgatttgggg
      661 gaagatggga atctctgact taatgtcata tttgctttga tatgacttca ctaacttcaa
      721 gcaatgtctt tgtggctgca caagtgtaag agacagcaat tagatattca ggatcctgaa
      781 tgtggggatc tggagatagg gtggaagaaa aatggggata acatcacgct gtacagccgg
      841 aaagcatctt ca
//
LOCUS       KCKM01001908             658 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30026apa ultra-conserved element locus
            uce-1466, sequence.
ACCESSION   KCKM01001908
VERSION     KCKM01001908.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 658)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 658)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..658
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30026apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>658
                     /note="ultra-conserved element locus uce-1466"
BASE COUNT          219 a          103 c          144 g          192 t
ORIGIN      
        1 aaatagtagt gtgggttact cctgaattaa taccctttgc gtttatttct aaacagcata
       61 tctgccagga tatttttgca taaaatataa actgttatct gctttctaat tactagtaac
      121 ctcaagatgg aaagttattt gaaagagaca gcaagggacc cactttctag atttgccttt
      181 gctcatgtta tctaccaaaa ctgttaatta aatgatgaaa tgtggggagg gggggaaagc
      241 acagtttact tacatagatg taaaataggt gcatgttcag aaagcagttg cagaaatcca
      301 ttctactcat tctctgtgtc aggatctttg ctttgtttca ttgcagtaaa ctgtgatcct
      361 aaagtccatc aatatgaccg aaagaagttt tggagttgag aaggattcct tgagtgctgt
      421 aaaaaaaacc aaaaaccaaa caaaagccaa acaaaacctg aaaaactaaa aagaaaaaaa
      481 tatctctata aaaaatgagt aggagggggt gtgattcata gtaatttgct ggggtgacag
      541 ttgtgggtgt aggacaagca gtggtcagct gatgagcttt aggccttttg atccctttag
      601 ccattctgaa tgtctgtcag atgcattaag tgaaaggagg atggagggaa cattaccg
//
LOCUS       KCKM01001909             652 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30042apa ultra-conserved element locus
            uce-7516, sequence.
ACCESSION   KCKM01001909
VERSION     KCKM01001909.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 652)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 652)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..652
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30042apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>652
                     /note="ultra-conserved element locus uce-7516"
BASE COUNT          178 a          129 c          113 g          232 t
ORIGIN      
        1 agtttcacaa aatcatgttt tataaactgt tgagaaacac tgacatgtaa tgaaacccta
       61 ttccctatat gcctccttct ttgtaaatga tttgcttccc ttacttagtg tagaaataaa
      121 cagaaatgtg tctgtatatt tgctggtttt tttttcctct ggtcatcata atcaagggct
      181 attacagcaa tagatcttat ctctagaatg gcagtcccct tgcaccttca gttcaaattt
      241 ttgtttatgc ttggctgcaa ttgtggctgt ttctgatagt tttaggtcag ccatgacaga
      301 ctatgggtga cactaaataa acaagctggg agtctgggac caggaaggaa tgatgctcat
      361 gctcagattt tgattttctc tggttaatca acatttctat ggagagtaac ccactgcgta
      421 aagtaactgt ttgtctgatt atgcatatta ttccatagga ttttttaaaa aggttaaaac
      481 cccctccaca cctcatataa ccaactagaa agaacgaatc ctgatcaatt ttagtttggg
      541 ttatagtagg cttcagagat ttgttttttg tttaacctat gttcaaccat ttcttcctgc
      601 atcctccctt ccttctctca gttgaattcc atcacagtaa gttgatctga gc
//
LOCUS       KCKM01001910             737 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30058apa ultra-conserved element locus
            uce-3689, sequence.
ACCESSION   KCKM01001910
VERSION     KCKM01001910.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 737)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 737)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..737
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30058apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>737
                     /note="ultra-conserved element locus uce-3689"
BASE COUNT          217 a          141 c          144 g          235 t
ORIGIN      
        1 ataactctta atatcttccg tcgctttcac acacagtgtg cttactgaac taaagccttc
       61 tatttccttc tgaatagaaa ccactcctgc ccagaccttg agcagctagg gatttgagtg
      121 cagtagacaa tttcaaagac tgctctttct atttaacaat cagtgcatta gactaaaata
      181 ttcacacaga tgcactagca attgaaaggg tgtgtggtgt agtgacaagg tccttctgtt
      241 acctggaact gtagaatgat gaatgagcat tagtggaata ttcttttggc ctttaggttt
      301 accttgatct tctcacagaa tgcaaattga cattataccc acatttctat agtatttatt
      361 actgtggtca tgatgtgagg gcttttttca atatgaatag tgtaaaaggg gaaacatatt
      421 actgcaaaga ggcattattg tgctgggaat gtataaacag ctgagaagaa tagggcgaca
      481 tgctcataat ggaaactgaa agctcttcat tttgtcctga ttgtctatcc ttccttttaa
      541 aacaaccttc ctttttccta gctatcaata caaagttctt tttggtaaaa tgaagtgcat
      601 tcatgctgcc tgaaagaagc ttttaaagtt gatctgtgcc cacacaaaag ggaggcagtg
      661 tttgagcaca tcaagttgag gaagcaaact tggtcaatgt tcattactca tggcttgaca
      721 ctctgagcct ccatatc
//
LOCUS       KCKM01001911             684 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30074apa ultra-conserved element locus
            uce-4855, sequence.
ACCESSION   KCKM01001911
VERSION     KCKM01001911.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 684)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 684)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30074apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>684
                     /note="ultra-conserved element locus uce-4855"
BASE COUNT          198 a          126 c          154 g          206 t
ORIGIN      
        1 tgtgcattca cataggcatt tttttaacct gattctttag gcatccccat ctcccaccct
       61 ctctccctgt cacctcttga aaaggttttt cacattggag ctgtgcttga atttagtcta
      121 attggaagga aatgtaagac ccaaatcttg gttctcattg gcatggagac acttgcacac
      181 aatcatggta tgcaaagcag cagaagtctg aattcataat tggacgttcc aaaatgtaat
      241 tatgaaagat gaaatgctcc tttcaatgag aaggctgtaa atagaataat taattttgtg
      301 tttgcttgaa caattctgta ttatggacct tacactggaa ctgaaattaa ttaagtgcac
      361 caggatttat ggaggaggtg aagagagagg gaaaaaaaag aattaatctg aagtaaaaga
      421 tagatgactt tgtgagtgta atgatgcgtt agtctagggt attctttaac aaatttagca
      481 ggcatgttct gggtacaaac agcactcact gacagaatta tctcaactaa tgcagctgct
      541 ggactctgag caaattgaga ttgcagatga gtactttaga tttagagctg ttaaccctcc
      601 atgcgccggt gacggtgttt ccactccttc ggtggggagg gtgactgttt tgcccgtgct
      661 gaggtctgca tgactcggcc ctac
//
LOCUS       KCKM01001912             737 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30090apa ultra-conserved element locus
            uce-7461, sequence.
ACCESSION   KCKM01001912
VERSION     KCKM01001912.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 737)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 737)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..737
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30090apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>737
                     /note="ultra-conserved element locus uce-7461"
BASE COUNT          124 a          213 c          212 g          188 t
ORIGIN      
        1 gggggcagga agggaccggg cgggcggtgc cgcaggatgc gagataccgg gcgatgccgg
       61 ccgggaggaa gcccgccggg ccggccagct ccatggtttg ttcagcagag ggcaagggaa
      121 ctgagattaa aaaaagcccc gctaagatca gaaaggctgg cgcgcacagt gccctattgt
      181 ggagctgtca cacttccctt tactttattg cttttgtcca acaccctatt gttccacttc
      241 cttttgtccc ctattcacag ccctggcttt tcattaccca gccggccttg ttgttttcgt
      301 ttcttttgtt tgaagttcct gagaggaagg ttttattttc agcggtttga ttaattcgca
      361 gcttgagctg ggctttgttt gttatgtaat tgctgcccca agtcgggcag gccggttcag
      421 cctccccctg caccccccag ccctgattta ggggggtcct ggtgaggtga gagggagcag
      481 aacacaaggg tcttggtttt ggggtgccag agcccgtgcg ggatgttctc cccatcccac
      541 ctcggcagcc cctgtgctcc cacaacccag atcccagccc ctggcagcgg ccagagtaaa
      601 tcccttcctt cgcctcctcc ttttcccgtt gttccctcct gaaaggcaag cttggggaag
      661 gtgattttgt tcccattctc tctgggcagc gtgagggttg gtggtcccgg caaggcagat
      721 cctggcgctg ccccctt
//
LOCUS       KCKM01001913             767 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30104apa ultra-conserved element locus
            uce-5111, sequence.
ACCESSION   KCKM01001913
VERSION     KCKM01001913.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 767)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 767)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..767
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30104apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>767
                     /note="ultra-conserved element locus uce-5111"
BASE COUNT          170 a          193 c          270 g          134 t
ORIGIN      
        1 agggtgtctc ttcttcttgc ggaggcagac agcttcgtca ggccacagta cctgagagct
       61 gggaaggtgc tgaacctggg aggcagagcc gtctggggag agggagagaa aggacacaga
      121 tgggatcaga gccagctgag ctttgtgtgc tggaaaaggg aggttatggt gagcttggcc
      181 ctaaagctgg ccactggtgt gctggccgtc agggaaaaga tgaattagca ctcaaagata
      241 aaacacaaaa cgaatgatgg gagatggatg gaaaaggaac gaggcagggg agggacagct
      301 gtggggtgag cagccctggg agccatcccg gcagcatcca ggcacaggct tggagactgc
      361 cctggtggca gcccaagctg cacccgtggc agaaccaaag ggatgctctt ggggaccatg
      421 gggccctcgc actcactgga ttgttttctg gatttcgagg agcccttgga tgactttttg
      481 ggcttcttta tccgctggta tttcagagct tcgagcctct caggtgcagc agcgtccccg
      541 gacggagatg gacgttttct aggaaggaaa agcagacagg caccgtcagc ggctctcggc
      601 cacgctcggc ccttcggaac gtccccggcg ggggatcgct cgaccccagc cagctctgcc
      661 gtggaaaagg aaaaggtgag aaacctgggg ccgagggagc ggggccagcc aggcgtgccg
      721 gagcatgggg tggaagccag gcgcccgctg gtcccctcca cgtcgcc
//
LOCUS       KCKM01001914             663 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30120apa ultra-conserved element locus
            uce-6756, sequence.
ACCESSION   KCKM01001914
VERSION     KCKM01001914.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 663)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 663)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..663
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30120apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>663
                     /note="ultra-conserved element locus uce-6756"
BASE COUNT          242 a          112 c          108 g          201 t
ORIGIN      
        1 taatgaattg tgataattaa aagtgtctaa ctcaataaaa atctaaactt tcgtggatga
       61 aatagatatg atcatccata gtcttcaaat acaatctgtt tgcaattacc aaaatgaaat
      121 aatatatatt agatctttat ggtttttaaa tgacattttg cacttcccag gaagttcttt
      181 tttcaccctt tctctaagtt actaaaagcc tgaggtctat tagtaactgc aaacccccac
      241 tttcaagcta attaaagtag tagaggcttg gaggtttaat tccccagagc tgaagctcag
      301 tatgagaaag gtaatttgtc tgtccagaac aaagattagg gagcagccag caagcatatt
      361 taataaatga gcatcaaata acttctacta tggacacaga caacaccaat tatgtaacta
      421 caagggaatt gttgagtgat atgtaaacta gaagattttt aagatcttct ctgagaggtg
      481 taatctaact catactttat ttaaaagcat agaagctgaa gacaagtgtt ttctacaaat
      541 attgccaacg ctggaaaatg tacactttta gtaggtagta atactgctgc aaacaagact
      601 acaggtatac tatcactacc aaaaaaacat agagaattct tgacaataca gtcccttcaa
      661 atg
//
LOCUS       KCKM01001915            1020 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30134apa ultra-conserved element locus
            uce-7701, sequence.
ACCESSION   KCKM01001915
VERSION     KCKM01001915.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1020)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1020)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1020
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30134apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1020
                     /note="ultra-conserved element locus uce-7701"
BASE COUNT          337 a          199 c          185 g          299 t
ORIGIN      
        1 agatttgctg tgcgtgtatt cccaaaagag aagttatctc tgttttagct cagccattgt
       61 cttttcagat aggagcacta gaaaacgatc taacagtttc ttttgatact ggtctttaac
      121 aggaagagag acctggtcca aacaccatca gaagcacaag atcataatgc agccagtaaa
      181 taaagcctct agctttaaaa gctcaccatc tgggtcaggc aattggagtg ggatcaatgt
      241 cagatataag taaatgagaa ggcagaaaag gagaattgtg agcactaagc aaagaaacct
      301 gtaatgcact tcttacaaag cgctgtaaaa ctcacattta ttttgtaagt atgagataga
      361 tgggttattt ctacatacag aggtgcccaa ctaagatcaa gataagtgat attaatgtcc
      421 tatggtcagt attattgaac ctcgaaagca ataaactatg agtcgataaa tattacattt
      481 gcaacatagt taacattctt ctactgtctc tggcacttat tacacattgt aaccgcaagt
      541 ctacaataca ttattcatat ttggggtgtc actgagtgat ggattgctgt aagagaggct
      601 gtcctttaaa taaatcaaca aataaaaatg caaatgttaa cattttcagc cacaactttt
      661 tccatcttga atggggaatg aaaatttcac attatatcga cagccagcag agagaacaat
      721 taacaaccta cactgtgaat aagagagatt aatttgccaa cgtctggttt tatcacttgc
      781 atatggaact atattggact ttttgttctg ctggctttct gagggagtag gcaaaacttg
      841 agtctcccac cacacttagc acctaactca tcacctcact cccaacacac ttttaatcct
      901 tttaaatgtt cctaaattaa acctggaatg aaagttttct tctcctcgtc ctcctcttga
      961 ctgttgaatg gtgtttgatc ccaaggcaga gaagaaaacc acacagaaca gtaacctatt
//
LOCUS       KCKM01001916            1055 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30150apa ultra-conserved element locus
            uce-2287, sequence.
ACCESSION   KCKM01001916
VERSION     KCKM01001916.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1055)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1055)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1055
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30150apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1055
                     /note="ultra-conserved element locus uce-2287"
BASE COUNT          282 a          278 c          184 g          311 t
ORIGIN      
        1 agcaggaaac ttatgatttg ccacccagga acaaagctaa agaaatgatc taaggtagcc
       61 aattaaagtt ttcataaaga aactctcatc tattctcaaa acccaaaatc tccttttaca
      121 gtgcaatcct cttagcactt atctctccct tcctcattaa tccagtttca cctagctggc
      181 actgacacat gcagagccgg agagggagat acacacacat atatacacac tttacttttt
      241 ccttctgttc ttcttgacct ttctgatttg gttcagcatt tatactagcc cacctgtctg
      301 gccaatctcc cctgcaacgt gcccttcagg atgaaaaaca tagtttgata acgcatggtg
      361 acaaaccttg cagagagcaa gcggtgagca aaagagagag aaagcgctaa gggaaatcac
      421 ttctaaccag gatctgctgc tgcacagcta atcaggcagg tattcagttg ttcactcctg
      481 cagacttgct tagcatagaa ataggctgtc tgcccaggaa gatgaggtaa tgtctaggtt
      541 taatgccaat ctctgtaact ggcaggacac atcgggtaaa tatttctgct gcaggagacc
      601 acattaattt gattttgcta ccaattttca ttattgctat tatttctatc attatgaata
      661 tgtatgagct tacctgctaa cgctttggat cgagagggca caggtctcca ggtgaggctg
      721 ccctcggtgc tgcagcactg ctctcccccc tcacactcct ccccacactc agtgctgcct
      781 ccactttatc ctttcatcct ctttactgaa ggattgggca tttgtctgct catttatctt
      841 cactactgca tttatatggt attagacccc cttttccact catagcatac attttttccc
      901 ctccttattg caccacaaaa cccacctttc attcagtact gcaatactgt ggtcatccac
      961 aagtgctcct tgtgcaggca ctgctttacc tgcatactaa tacagccacg tcttctatca
     1021 gactgtcaaa aatttacaag gtccccacaa cattg
//
LOCUS       KCKM01001917             508 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30165apa ultra-conserved element locus
            uce-1770, sequence.
ACCESSION   KCKM01001917
VERSION     KCKM01001917.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 508)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 508)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30165apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>508
                     /note="ultra-conserved element locus uce-1770"
BASE COUNT          156 a           98 c           82 g          172 t
ORIGIN      
        1 tcactatact gaaagaatac tgtcatacaa tattagtttc tcggtttcgt aacattaaga
       61 aaggaaaagt aaataagatc ttacctaaag gagtttaact gaagcttaga actattttgc
      121 tctagaccct cagccttcgt tggcatcctt ataaactact gtagttaaag ctttgcagag
      181 atacagcgca gctttttaag actggctgaa cttagtgacg ttttcaagag ttctcttgta
      241 ctagacctgt gtccctggaa gagtacctcg ctggggttat ttcctttcct tgccattgaa
      301 gaagcagcat ctaaaagatc taaaaaggtg tttctcctcg cagagatagc tcttaagtta
      361 tctagatatt ttaaacctga tcatttacag acaacatact tttttttctg accagcattt
      421 aattttacat atacaacaat tgctttatat tatttgtggg accttatgct acccactcct
      481 tgccttattt tacaagatta aaaaaaaa
//
LOCUS       KCKM01001918             683 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30180apa ultra-conserved element locus
            uce-4434, sequence.
ACCESSION   KCKM01001918
VERSION     KCKM01001918.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 683)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 683)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..683
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30180apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>683
                     /note="ultra-conserved element locus uce-4434"
BASE COUNT          222 a          116 c          127 g          218 t
ORIGIN      
        1 gagcagatgc ttggacagag aaatcgatct gaatgaaaac ggtacaggaa cgtttcaggg
       61 tcttctttct aaatttattc aagtattaaa caaacagaaa ctacatcatg catcagatac
      121 ttttctttat tgtacaacaa aactatggac ttgtttgtaa ttgcagcatt tccagcaaca
      181 tcaggcagac ttgtcgatgt tatccagttt tgcacagtca ctagagtgtc gcatcatgaa
      241 ttattaaatc agtgcttcgt ggtaatacat aatttcttat caattattca tgctaatgtg
      301 cgtgtagttt acttaattgt gttattgacg atcaaaagta atttcctgaa aatcctcaag
      361 gacagaaaat ttaatcagcg taactacttt tcagatgcaa tgctgttaag tattcttaat
      421 ttgctcaaca attcacttat ttatgtacct ttctggagga aatacgagtt taatcaaaca
      481 attagattga agagttagtg tacagaaggg ctgaagttca accaaatgca aggcaattat
      541 gttgaaatga agttgggcct gcctctttgg agtggatggt ttttttaagt ctttgtgggg
      601 gagacacaaa aaaaatatta ttgggaagat cactaagaaa acagagattc tctcttctct
      661 cactgctccc cacaacaaag cac
//
LOCUS       KCKM01001919             755 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30196apa ultra-conserved element locus
            uce-1625, sequence.
ACCESSION   KCKM01001919
VERSION     KCKM01001919.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 755)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 755)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..755
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30196apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>755
                     /note="ultra-conserved element locus uce-1625"
BASE COUNT          196 a          190 c          159 g          210 t
ORIGIN      
        1 cgccacccct cccacctgca aaactccttc cctctgctca ccctcccacc tccctttcca
       61 caggagtgag atgctgactt tgcaagccat tcgctttatg aatatgaccc tcaaagggaa
      121 gaaagcctct cacaagccca gaactatgtt atcatcgtta ttaaggagct tgaaaaggag
      181 ctgggaagag gagacactgg tggaattgca gcctgattgt gattgatgtg ttcctattag
      241 ctcctcactg ttatctctct ggatggcaag aacagccagt ggcttgtaac acaacagatt
      301 acctgagttt tcagccctag acggatgttt aaataaaata tagtcccttt tagcgagaag
      361 ctcattttct ctccgaggct cccagactat ttcatgtcag ctgtgattcg ctgtgactct
      421 cctcagtaaa catgtcttat cattaataat tctttacaag cacaatttca tggagtctct
      481 ttgtatgtgt gcgtggggga ggaggggagg gggtgcatgc gcaaatgttg gtttcaacct
      541 catctcgata cagtttggga acccaaggtg cttctcttca gaatttcacc tggcttgcca
      601 aaaatgattg attaccccta gcagactggg tgtccggcta tgcccaacaa atgactttgg
      661 cccctaacaa caggccttgg ccagatagaa atcaatattt caccattaaa atctatcaaa
      721 gaagagttaa ggcaccatct gtccctgccg ccttt
//
LOCUS       KCKM01001920             611 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30210apa ultra-conserved element locus
            uce-833, sequence.
ACCESSION   KCKM01001920
VERSION     KCKM01001920.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 611)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 611)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..611
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30210apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>611
                     /note="ultra-conserved element locus uce-833"
BASE COUNT          207 a           96 c          125 g          183 t
ORIGIN      
        1 atatccatta tagaaaggtt gtagctaaat aaatattatt ttagtttaat tggattaaaa
       61 attagaaatg caaattctgg tgcaccattt ctctaagtcc ttgtctccct ttttatggta
      121 atacccttct aatggtttaa gcctatgaag aaaaaacact gaagatttta actagcagct
      181 ttgcaggggg gcagaaagga gcaaagaaga tttagtggtg aaaagagcaa ataaataggt
      241 gctccaagat taaaaagagg gtagaagtgc atgctgagct gttgaaagac ctctctgtgt
      301 ttaaagaaaa atattgtttg gttctttcac cagtgcatga tcaaaataag aggtacaaat
      361 tagttcatgg ctgctgaagc tacaaaacat catgcagaga gctgtctttg ggaacgtttt
      421 aatgaggaga agaggtcatc agactgtgac actgcttttc agaattcttc aagaacaaca
      481 cagacttcct gttccaaatg tggtaaagaa taaaacaacc ttagtagtaa tcgtacaact
      541 tttgaaccgt gttccttgga aatactgtac cgtgctcatt ttgtagcttt agttagctat
      601 ctcaaaggaa c
//
LOCUS       KCKM01001921             519 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30226apa ultra-conserved element locus
            uce-1267, sequence.
ACCESSION   KCKM01001921
VERSION     KCKM01001921.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 519)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 519)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30226apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>519
                     /note="ultra-conserved element locus uce-1267"
BASE COUNT          176 a          101 c           75 g          167 t
ORIGIN      
        1 ggacttgagc cgctgtgata accaagtact gtaccattgt atctacatat tttaaatgtg
       61 taatttatca attgaaacat acccttcaat acatgtgcca taaaagaaaa gagcaagggc
      121 aattatgtaa tagtatagtg tttgtctgac gtgccttaaa tccccatatt gttattcctt
      181 gctgaataac aaatacaaaa tccctgttag caatgttttc cgttttacca gttttatatt
      241 agctacctcc ttaaaaattg ctaatctaga tactacatta gtaggatgtc agtcaaactg
      301 caatccacag tgaagccttc ttcatatacc aatttaaatc attcatggtc ctttctttgg
      361 cattattcaa aagatcataa taattttctt gtgcccacag cacaaaaaaa tcaattattt
      421 ccccacaaag acttgaaagt acttagcgag tgctgtaaga aaagctgagg gttatatcaa
      481 attgaaattg cactcattac acacaacaca attagttgc
//
LOCUS       KCKM01001922            1024 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30242apa ultra-conserved element locus
            uce-1054, sequence.
ACCESSION   KCKM01001922
VERSION     KCKM01001922.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1024)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1024)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1024
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30242apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1024
                     /note="ultra-conserved element locus uce-1054"
BASE COUNT          310 a          234 c          220 g          260 t
ORIGIN      
        1 ataagataaa gactacgttg atcaagaaag ctgcctgacc tacaagcttt cccctgtaac
       61 acaagtggtg gcaccaggac aaaaagacac ttccatctgg ccaggaggac actgaagtcc
      121 atcttgccca gccatgcaag aggaggccgc aaaactgaag cacaagccca gcatgagtgg
      181 aggggctttg ttattggtgt taataaatac cttctcgggt caccataacc agtagctaaa
      241 ccaccttcta catccatttt agagaggctg gagtcggaat ttgagtttcc attttgttcc
      301 gagaggaaag ctacgcactg tggtcaagaa cagtacatac ctgaacctct gtcttcaatc
      361 aactgaagca atttggggtt gatggcttga ttagcctcac gaagcacaga gatgaggtca
      421 tttacttgct taatattgtt aggagtaaag aatgtgtatg ctgtgcctgt tttggtactg
      481 cgggcagttc gtccaattcg gtggatatag tcctctgagg agttagggta gtcataattg
      541 atgacaaatt tcacatcttc cacatctgta aagtgttgca gtgtggcaaa aagcaaggta
      601 caaagttttg cacaccacaa cagccaaatc gaagataaac attagacagt ggtactttaa
      661 aggaaataat ggctgcaaag aacagtgtta gaatcaccca tttctgcacg agtattgtgg
      721 aagagaaagt tatgcacact ccgtctgttc ccgtctcatc acccaccctg tgatccaaaa
      781 ccttaccata aaggagtatg catttgcttg tcattcccaa ctcaagagtc ccctttacaa
      841 atcatcaagt gacatctgaa tgcttctttg cagtagggcc actaaagctc acagcagcct
      901 cttcatgtgc tcatttgagg accttagagt aaaaacatac aaggtccttc acatacacac
      961 tcattagaag ctcaaaaaaa aaggggccac actgctcgtc ttgccaagac ctttgaaccg
     1021 cagc
//
LOCUS       KCKM01001923             783 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30258apa ultra-conserved element locus
            uce-5416, sequence.
ACCESSION   KCKM01001923
VERSION     KCKM01001923.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 783)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 783)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..783
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30258apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>783
                     /note="ultra-conserved element locus uce-5416"
BASE COUNT          229 a          141 c          148 g          265 t
ORIGIN      
        1 tcttgtccct tcctcgaaca cacacagaat tcatgctgca agagcatatg actactccag
       61 tacatcaaca ttttattcgc tctttaaaac atgaatattt aaacagaaga catttttccc
      121 catgcagaaa cctaaataga agctcttatc tgaaatagta aaagctgtta tttttttttt
      181 tcaagaggtt ttaggctgta tagagatagt tacatacaca ggcatctcaa atgagagggc
      241 accatacata catgtaattg gttgcttttt ctttttcctc ggcagtctgt acaaaacgtg
      301 aaaatgtgcc tgcttctgac tagccattaa aggcagtggt tgcaccatac tgtgatttgg
      361 ggagctgaag aaaatagcca gaactgactg atatctgata aacagtaaca ggagtcagtt
      421 tattgcacca atcgttaaat aatggtgctg attataaggc tgctaactgc agatgctgta
      481 attgtctgtc ataaatctta gtcatttgtg acaggagcac aatgaaagag agcatctgct
      541 tgagggcaaa tgacttctga taaatatcag ctctgctaaa atgtacttgg atgtgtctca
      601 atattttgga gagccattca tgttgcttcc acaaatgtga agttattatt ggtttgtatt
      661 gattttgcca ccttggtttt ttctctttat ttttttttct tttttaaaga gacagagtca
      721 gagagtgact caaggttgag ttgaattgaa tctcagctct ttatctgatc tactcattcc
      781 tct
//
LOCUS       KCKM01001924             815 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30274apa ultra-conserved element locus
            uce-3854, sequence.
ACCESSION   KCKM01001924
VERSION     KCKM01001924.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 815)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 815)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..815
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30274apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>815
                     /note="ultra-conserved element locus uce-3854"
BASE COUNT          276 a          126 c          157 g          256 t
ORIGIN      
        1 ggcagactct ctctaaaatc cattaacact gggcattgag ggcagagcac ttcatgccca
       61 tcaaagattg ttcagttgta ttccaggctg actgcaagga aagggagata gtgttgaatt
      121 agcattggag catagattgt tataggaata aaatatgaag taaaatatgt gacagaatta
      181 aatccatcag ttctaataaa ggaaacggaa gaaagcaaag aaatattgga cccttaaatc
      241 ccattaacca ggccagagag agaatgtgtt aaaagggagc tgcactgtat cttttttcat
      301 tgtttgatga aataatcttt ttcacccttt aagtggtgtg tttaaaaatc ctggtatttc
      361 tgaaacaaag agaatacaca gccaccgagc tagctggttt ttataccttc cttttctgag
      421 tattgtcctt cagtacaata ctgagccgtt tctttgttct cacaagctag cagttaaatt
      481 gtatgtaaat gtatgcaaat tagatgctgt ctaataaaga gagtcattag atggaagaaa
      541 tatttagttt agcggaaaaa aaaaagaaag aaaagaaagc aggtatgttt tgcaatggaa
      601 aaatgtaaga ttgcaaaagc ccctcaaact ttgggtaaga gctttttata aagccattaa
      661 aatattttct aaaagacttg acctattctt ggacctttcc tgtgcatgtt tttttgtgta
      721 tgtgtatgta cacttctgtg atcttttgtt aaaactcaca ccacctgtgt tatctataca
      781 tagttgaaca gacatgtaaa tattgtattc ataaa
//
LOCUS       KCKM01001925             872 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30288apa ultra-conserved element locus
            uce-6844, sequence.
ACCESSION   KCKM01001925
VERSION     KCKM01001925.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 872)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 872)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..872
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30288apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>872
                     /note="ultra-conserved element locus uce-6844"
BASE COUNT          288 a          128 c          197 g          259 t
ORIGIN      
        1 ggtggcaaag gattcttgta tttgtacagt tttcttgttt tgcacatagc tatttgcagc
       61 ttttatccaa acccagtaaa caattaaaaa aaacaaaccc tttcttgtag ttccatcatt
      121 ttggaattga caaataagtt aaaaaggctg ccaaaagaaa gcaggagttg gaggaagtta
      181 attcgcgttg atgtgtgcat gccactgata gcaagttatg cctatgacat tctgacatag
      241 cctctcaaaa aagagaaaga gtggagtgga gtgaaagact aagaggatgt tcatttaatt
      301 ggaaagccta ctgagatctg aggcagctga ggcaaaggat gcaccctttt tctgcacaat
      361 ggcattggct gaaggttgta tataaggtgg ccttattaaa gtgacaaggc aatttagttc
      421 ttttgtgcac aatgattcta cttcattgat ttacaatggg aaggatataa ttttgctagt
      481 gttggcaaaa agctcaaatg tcaggctttt caaattgcca tacttgcctt gttcaggatg
      541 aataatgaat aagtcacctt ttgtctacag ttaaatattc ttgaataaat acaaagaaca
      601 taaaagacat aaatgattgc ctgatttata tttaaaataa agatcaacat tgtgataaat
      661 ggttgaaaat gcttagtgtg aagtaatatg actatgctga taattacatt atcaattaag
      721 gggcagccca ggtgtggagt gttataaaat ggatggcaga gagaaaaccc tagtgtggaa
      781 catgccaaac ttggctctct ggaaagtggg gggggagagt gaagagaccc ttagctatgc
      841 agggggtctc atgtttaaaa ttggaccatt ta
//
LOCUS       KCKM01001926             662 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30304apa ultra-conserved element locus
            uce-2504, sequence.
ACCESSION   KCKM01001926
VERSION     KCKM01001926.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 662)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 662)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..662
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30304apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>662
                     /note="ultra-conserved element locus uce-2504"
BASE COUNT          246 a          117 c          105 g          194 t
ORIGIN      
        1 ttacagagtt gtgtatcaac ataacaaaaa tagatgagga aaaactatta ctttttctgc
       61 aagaagcctc ctcccacaca ttaactgaaa acttatgcag cattttaaac acacaactgt
      121 gttaagaaga agaataatca caatctgggc agactctgca gctgcccctt tgacttatca
      181 atttcagtaa gcacaatttc aatcaagtct agataaaata tactaatcct aaatagacca
      241 agtttgtcac ctaccacttc ctataagctg cttactatcc tgaaaaagag agagagagaa
      301 gaaatgctaa attaaatgcc aaacagtagc agacagcgct tgtttggctg attaacttgt
      361 agacaagcat tacaaataaa tctgagcatg gtctgcagca aattaaattc cagtgctttt
      421 aagaacaaag aattccttcg gaaagaggat tagcaacttt acacccagga atgacagttt
      481 aatttaattg ttccacaatc cgatatttaa tatgcaaata tcattttgat atataacagt
      541 gaatttgaaa aagtgaggaa acaatttcaa catacaacaa gactgtgtct cttctgaact
      601 gtaattatac agaataaagc tggttgaggc ttttttttat tattgggatt gaattctatt
      661 aa
//
LOCUS       KCKM01001927             719 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30320apa ultra-conserved element locus
            uce-4077, sequence.
ACCESSION   KCKM01001927
VERSION     KCKM01001927.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 719)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 719)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..719
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30320apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>719
                     /note="ultra-conserved element locus uce-4077"
BASE COUNT          191 a          173 c          182 g          173 t
ORIGIN      
        1 ttggttgaga cttaatacct aaaagagagt ataacttggc actcatggcc agggcaagca
       61 aatattgctg ctctattttc aggtccacag acctcgccgg cagggccacc accttcatga
      121 aggacctggc aggcctggcc aaggtgcctc cccttcactt ccaaaaaaag ggggtggccg
      181 gacagccccc gggctgcggg cggtaaggaa acaagttaat tttgctccca aaagctttgg
      241 tagctcatta gagaaaagag ccttcgaaaa tgttgctaaa atatgaatgt tttgcagggg
      301 ttgccacaga aacatgtaga gtgtataatc caaaatagga tgtctagaca aactcctact
      361 gtctgacctt ttatgtattt cctaatccag ccaatcttgc caagcaaatt ggtgactaag
      421 cagcaattca ctttacacgg tgtcgtaaag gtctgacaag gcccaggtca cggttataaa
      481 tttcagtctg gctacttcag caactctcgg cttcctttac cagcacggct cccgtgtggt
      541 ttctgggctg tgatgtgtgc tctggatcat cgtgaagtaa ttttggggcc gtaaaatccc
      601 aaagccgcag ctccgctgtg aaacagagag ctctttcagc cggccaggac cccagagttt
      661 acacaaaact gggagggagt ctggggtgaa agggaatgga aggcaggcag ccatctcct
//
LOCUS       KCKM01001928             898 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30336apa ultra-conserved element locus
            uce-190, sequence.
ACCESSION   KCKM01001928
VERSION     KCKM01001928.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 898)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 898)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..898
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30336apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>898
                     /note="ultra-conserved element locus uce-190"
BASE COUNT          286 a          173 c          183 g          256 t
ORIGIN      
        1 agccttgctt aacatatatg gctacaacag ggccctcggg tgaacatgta tcatttctca
       61 gaaaatgtgc tgaggtagag aagaggagag aggcagatat aaacactctg cccttcgcgg
      121 tcctttctat gtgtagaaat acaacaaaag tcttccactt ctcatgtata ggaacagaac
      181 ttgttactga tggaaaaggg ctgctgctaa atagtacaaa tacaacctgc aaggggcaag
      241 ttctagcatt tccaggattt tgttccttgg acctgtggaa gtcagtacag ttttgccact
      301 tagaaccctc tgtgttattt gttactgtca gtggaaggga aatctgtaat tgttaagagg
      361 gaaagagcct gtgcaaattc ttcccagtgc aaagtgaaca gtcaatcact tttataagga
      421 caggaacaac tgaaactatc cattcgtata ctttccttta gtcaacagta ttacctttag
      481 taatctgggg aatgtgcatc cataaattac agaaagtgtt attgcattgc tgaataaaca
      541 gcaacatttc catcagcagc agtggcagcc ccacaaaggt ataacaaaca gactcaatca
      601 ttttcttgtc aagctttgca atgactgcag agtttactgc tggagataat gttgctttcc
      661 tcagcattgt gtgccaaact gcaaactgct tattaaaaca aaacctcttt ttctgagcag
      721 catgagttgg ataatcactt attgcactca agaaaaaaca ggtttgatgc ccagaggtgg
      781 ttagcaatca agcatatgca ttaacatttg gtttgtaaaa actggttaaa aaaaataagt
      841 gatctaaaaa ggaattatga gaaccagtgc cccaggttga tcatttccct gctaatat
//
LOCUS       KCKM01001929             906 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30352apa ultra-conserved element locus
            uce-7003, sequence.
ACCESSION   KCKM01001929
VERSION     KCKM01001929.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 906)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 906)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..906
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30352apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>906
                     /note="ultra-conserved element locus uce-7003"
BASE COUNT          251 a          200 c          201 g          254 t
ORIGIN      
        1 ttttgctctg ggaaaatata catatgagga gaatagtatt acacttgatg aatatacaca
       61 gtttcaatac cgagaaaaga cctttgcatc tcttctggct ttgcccacaa gtctagggcg
      121 ctttgctgat tcacattttg atccctagga aactgaggta gccagtcaaa ttctttttaa
      181 accaggatag aaaatgatct tcaggtcagg ttcctctaga aaggtgcatt tctctcaaaa
      241 gacagcatat caggctctta ggagaaagct ttggactttg cagacggacg gtctgtgtcc
      301 cttaaagcag gctttgctat cttaatttct gtttcctctg tgaaaggcct tgcagcaggc
      361 ttaacgagct acgaaacgcg atagctcaca gaattctgcc cctcgtgtgc agcgcggtgt
      421 ggtttccgcc aggcctgggt tttgggaagc ttattcaatt actctcctct tcaggtttgc
      481 gtttgtgaaa aacagtgatg gagtacagtg tcacaggtca cttctgatta aacatcccat
      541 ccttctcgca gacatttagc tcagaaccca tttgtgtgcg actgccattt gaagtggctg
      601 gctgattacc tgcaggataa tccgatagaa accagcggcg ctcgatgcag caatccgcgt
      661 cgccttgcca acaaacgcat cagccagatc aagagcaaga agttccgctg ctcaggtaat
      721 tcgtttatcc aggctgtact gcgctttcaa tccagaaata agcaggtcca gagagcctac
      781 taatcgaatc tgcaggacag tgtttgctat aatggatatt atggagcatc tcttaaaatt
      841 aaatttggga aattcggtta gttctccaga aagccaatta ccttatggat taaaaaaaga
      901 aagaaa
//
LOCUS       KCKM01001930             638 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30366apa ultra-conserved element locus
            uce-3466, sequence.
ACCESSION   KCKM01001930
VERSION     KCKM01001930.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 638)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 638)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..638
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30366apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>638
                     /note="ultra-conserved element locus uce-3466"
BASE COUNT          220 a           99 c          115 g          204 t
ORIGIN      
        1 ggtaaatgag cactgatttt tattagcctc tctggtagat aagaaggttt cagtcttaat
       61 gaatgcaaga acaaatattt aacaaaaagt gaaaagcaaa gaccggaggt atatatccta
      121 aagtgaaaga gggaggagaa taatgagttt gaaaagaata aaacacagat tgtttagtgg
      181 aaaagaatgt tacaaaggtc tctatgtgaa tcttcggttc cagggggttc taccaattcc
      241 ttttattact atttcaagta accaggtaca tatggcatgt ttgtaagtaa agcagtcaat
      301 gaagttagtt acacctctgc atttattacc ttacccctga gtattattaa cttttacatt
      361 ccccataaaa tataatttat cacttaaata atttgctttg tgtcagggtt cagtgtgctc
      421 cagtgctttc ctgctcgtta aatgagatat ttttacttaa tgagcccaga atgtcctttg
      481 cgtttaacat tagaattgat ttcaaacact ccatttttct aacatatttg tgtataattt
      541 cagaacatgg acttcatccc acgatcttac actgaagaaa aaaagagcta caaagaataa
      601 tgatccatga attttagaga gagaaacagt aagtatgg
//
LOCUS       KCKM01001931             877 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30382apa ultra-conserved element locus
            uce-7236, sequence.
ACCESSION   KCKM01001931
VERSION     KCKM01001931.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 877)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 877)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..877
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30382apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>877
                     /note="ultra-conserved element locus uce-7236"
BASE COUNT          296 a          182 c          145 g          254 t
ORIGIN      
        1 tgcaatgtac gtttagagag atttcttgaa cacactttta aagaggggat ttgattttct
       61 taccaacaag atggcaagac agaagatgta aaaatactta ggttaacacc tctacaactc
      121 aaggttgcca tacgaggtga cccaagtttg tacttggtaa aatttcaaaa gcaagatgag
      181 aaggcccctg tactgataaa gtctattctg tcacacttta aatctatctc ccaatacaca
      241 cagaaatgca gcaggcactt cagatacatc agagtctctc caagattctt ttccagtaca
      301 tttacccctg ccaagccctc cccttccccc aacacacaaa aatccattac taaagggtct
      361 aatctcagct atcagcacag agtgcctttt atggagccat taaaccattt ctcttgttta
      421 cagtgcctga agaaagatgt gaattatgtc tgtgacaaaa caggcgataa catttctaaa
      481 ctgctatcaa aatgcaaact gaaatacact taaggacagg gaccctaatt cgtgtttttg
      541 ctattttcct tactcactgt aacttaacag ctctcacctg atgattcaaa caaattattt
      601 atgctggaag tacaacaggt aggcatttta ataataatat ctacttccaa taaacgaaga
      661 gttttattga acggttcatc caggaaggta aagttctggt tacttctcag gtgatagcaa
      721 tgacctaggt ctatctgtag tcattaaaaa aaaatccaaa tacaatataa tgagttcaca
      781 tgaggcctga aatgctctgt ttctgcaaca gttagttacc attcaaacca gacatttgat
      841 ataagtattg aaatatctga tgcagtgagc tacaaaa
//
LOCUS       KCKM01001932             529 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30398apa ultra-conserved element locus
            uce-589, sequence.
ACCESSION   KCKM01001932
VERSION     KCKM01001932.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 529)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 529)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30398apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>529
                     /note="ultra-conserved element locus uce-589"
BASE COUNT          163 a          103 c           94 g          169 t
ORIGIN      
        1 gcagcaatta cactgtaaaa gtgctgcaca agattgattg ctctgatctg tagttcaatt
       61 gtaaattaga atacacatcc ccctggggac acacggcccc tatttgtgat taagaaaaaa
      121 gccccataat agactaatag ctaaagttct ctctctttta ctttcaggca attagcttga
      181 tgaaatggcc tctttttgtg taccctggaa gtgtaaaccg atatcataat gaagtatatg
      241 atgtttattc tattattttc accttgccat gtacgcagga atgcataaat aatggctgct
      301 ttgtctagta catttactga ttcagaagta aactatgtct taaagatgca gtgtatgatc
      361 ctgcagccct atgttaagct ggccacctgt ctagtcccta taaaaactaa tgttctacct
      421 aaagaagttg aagcccattt ttagtcaggt ggttaaatac tgtttgcaag acactttcat
      481 ttgtaaggaa ccttaattgg aaaatcctcc taataacctc gtgagaaaa
//
LOCUS       KCKM01001933             711 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30413apa ultra-conserved element locus
            uce-1300, sequence.
ACCESSION   KCKM01001933
VERSION     KCKM01001933.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 711)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 711)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..711
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30413apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>711
                     /note="ultra-conserved element locus uce-1300"
BASE COUNT          219 a          130 c          147 g          215 t
ORIGIN      
        1 aacagaagtg tacatcgtta tgagtttggc cagttctggc aactattatt tagtcccaag
       61 aactgccatt cgggttcctg agttggtgac atttgtggac cgctaggtgg aaaccagaag
      121 taaacttttg aaaaagctag ctgcaggatt ttatactagg cgagcttgta tatagatttt
      181 ctgaagttgc caaaggggag cacaagtttc atcagcaatg ataaatgcag agtggcctct
      241 gttacggcac gtttgtattg ctgtgcaaat gtcttgcaag ttttgaagcc tcgcacttga
      301 gttctcttag cctgttggaa gaaatctcat ttaactggca tttttacatc tacattaatt
      361 cttttaaaac actgaagtga gtgttctaca gctatgtaaa gaaacgcatt atcaaagcat
      421 taagatatga ttaaactgac attttcttaa gaaaacgaaa ggagcaggaa aaagccattc
      481 taaaaggact gagtgctaca tactccagat attatcttca gtgcttactc agggatcttt
      541 aaagaagctt attaccaagt accctaagaa gacaagtgtg gatgtgtaca gatcagagga
      601 atgcaagtta atgcacctgc cagattttac tatcgtacaa agcatgtcaa tcagcactca
      661 gaccttgcgt ttaaaaatgt gttccctcag atttttttca acgctgtatc t
//
LOCUS       KCKM01001934             821 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30429apa ultra-conserved element locus
            uce-7540, sequence.
ACCESSION   KCKM01001934
VERSION     KCKM01001934.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 821)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 821)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..821
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30429apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>821
                     /note="ultra-conserved element locus uce-7540"
BASE COUNT          195 a          201 c          228 g          197 t
ORIGIN      
        1 tggtggcaga gaaagtacct aagtgaatat ttttaataag taactgtaag ggggaaaata
       61 ttttccctac taatactaag aggatcgttt cagaaaaatc tcccctttga ccatggtaag
      121 gatttgccag cagctaattt cagtggcatc tggcgcagcc tttcgccttg cgcctgtcgc
      181 aggcgtcgtc ggggaactgg gcgagcgtgt gagatttccc ttcccatttc agcgtccccc
      241 tctgtaactt atccctcctc agcaccctct gccaaacctc ttcttcctcg ccaggtttcg
      301 ccggcggcac agcagatgca gcccacgcag acgatacagc caccgcagcc gactggaggt
      361 cgccggagga gggtggtgga cgaagacccg gatgagagga ggcggaaatt tctggaaagg
      421 aaccgagccg ccgccacgcg ctgcagacag aagaggaagg tctgggtgat gtcactggaa
      481 aagaaagcag aagagctcac ccagacaaac atgcagcttc aggtgtgagc cactgtctgc
      541 acccccgagg acacagaggg gttctttgtg cttggagggg ccggcggcct tgctgccttc
      601 agggctgccc ccgcacggcc ggctccgagc aggagcacgg gcataatcaa agtcgattaa
      661 tcaagatgtg tgtgcttcaa ttaaagactt aattacattt tagtgggata agccaggaaa
      721 aagctgtctt gggatttaga agccttcact agatggagtt gtatttattt tattttcttg
      781 tcactgcttt ttgtggcgat ttttttttgg ggaagtgcca t
//
LOCUS       KCKM01001935             852 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30445apa ultra-conserved element locus
            uce-7753, sequence.
ACCESSION   KCKM01001935
VERSION     KCKM01001935.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 852)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 852)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..852
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30445apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>852
                     /note="ultra-conserved element locus uce-7753"
BASE COUNT          238 a          160 c          180 g          274 t
ORIGIN      
        1 ctgaaattta gatgtggtag cacctttcca tatttagagg tacagccagc acgaagggca
       61 agggcttgag ttgtgatgct ggtagggaaa aatgaaacac atttgcgctc atccgttggt
      121 actttctaat aaatcataag cagctgacag ttatcgttgc ctgatgttct gcttgtactc
      181 acagaaatca aatcggcagg actgagttgt ctgtaatcgt agctgggaag ttccatgttg
      241 gcatgaaatt agctcagtca atggctggaa aatgatggga ctgagatgga ggtttattgc
      301 ataattagtt aaacaatatt tcatctgtgg gttttatcaa gctctaagac aggcatatct
      361 gttgtaatta tattttacat cagtaatgtg acactttaat gaaatgtgtc cctgcgcgag
      421 cgtcgggata cattgcatta atgtaaaacg cttttgttgt acgctttaca tttggaaaca
      481 gatttaagta ttaagtggct aatgtctgca gccagggaat cctttccgaa tttgtaacac
      541 tgaccagaac agaccgcatt acactctcca aatggtgcat ttttgcattt gaatgtctga
      601 attatcctgg tttcttagag acgaccacaa caccaacatc ttaaatcctc aaaatattgt
      661 ccgcttcatt gaatgctcgt gatctaagca tatgtgtaat tattctgtaa ttctccccaa
      721 aatgtgattc cttggaaatg catactagat ttcccctatt gtagctgcaa tgactatttc
      781 tttgtgcctg cttctttaag tacggtcaca aggaagtctc tgtgccttag tgcaccgcat
      841 gtgtaatgat ga
//
LOCUS       KCKM01001936            1019 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30461apa ultra-conserved element locus
            uce-3927, sequence.
ACCESSION   KCKM01001936
VERSION     KCKM01001936.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1019)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1019)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1019
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30461apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1019
                     /note="ultra-conserved element locus uce-3927"
BASE COUNT          364 a          185 c          179 g          291 t
ORIGIN      
        1 atgactatca cgaaaggatc tgggaagtgg actaggaaac cgaatggata gtcagtaatg
       61 gtgactttcc taaattatgt cctttgtgca tcctatttgt agaaataaaa tggcattaaa
      121 aaaaaaacac tcaaactctc aaccacagaa taattgattg cacacatatt gtttatgtca
      181 aatctcagaa gatggaaatt attattacac gaaacatcag ttgcgctgca cttttctgga
      241 tctccactca gtctcagcaa gcccttttgt tttctaatga ggtcagagaa attaagtcgt
      301 gtattaggaa ataaaaaaaa ccccagaaag ttctcaatcc aaaattccag cagatactca
      361 agtctgagcc actgcacact cctagaacaa atggagaaag cagaaaaagt cttgctttgt
      421 aacattaaat gtgattgaag actgtacagt tcttcttacg cttttagacg ttttgtcact
      481 ttacctggag aaatatacac tgcttattct gaattgctgc tgatgtccag cacttgtcaa
      541 aacctctctc tgtcaagcac ttcacaaagt gttgcaaaat gacagatcag gatgtctgaa
      601 tagatggagc cccaggaaaa acagaacaga tagaaaattc atgactctaa actacatcaa
      661 agcgacttct gtcaacatca tgtcaaaaga aggaaaaaaa gaactgttca ttttagaggg
      721 tttttttcat tatataaaca cttttttcac gtatgagcta agtgtaagga aaaattaact
      781 tggtgtacag tatgatcatt tgaatgtgcc aaaaatactc cttaaataat ccaggaataa
      841 ggaaagttct aacagtagat actgtctggc agttaaaacc aatgacatcc aaaagaaatg
      901 catgaagaat ctatcagctt aaaataggac aaaccatctg gctccaaaga aataaaagta
      961 ctctgctatg catgtttgtt gggtttgcag aatcctacaa ctggattaat tttgtattt
//
LOCUS       KCKM01001937            1081 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30477apa ultra-conserved element locus
            uce-3687, sequence.
ACCESSION   KCKM01001937
VERSION     KCKM01001937.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1081)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1081)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1081
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30477apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1081
                     /note="ultra-conserved element locus uce-3687"
BASE COUNT          336 a          184 c          220 g          341 t
ORIGIN      
        1 gaaatattaa gctgggagca cagattatta gtagcatctc aagaatgtga cttttcaggt
       61 gtagtaattg gcattttaga gtttctttct ttttagacaa aagggtattt catctgactt
      121 tctgcttatg aaaattctgt gatctaagtc tgctagattg catgttttcc catacgatgg
      181 tgattctatt tcctatttca ggctgctaca gaaaaaattg aggggaaaaa tataaataaa
      241 atatgcccaa gcacgcaagt caatgatctg tgtgttaagc ttattggcac atacaggaca
      301 attttattgc atgacctact ggttaaaaac atcaaaaata taagtcaagt catttgaaga
      361 actgctgttt agtgagttag aatgaatgaa gtctttattg agtacatgct tccagattcg
      421 tcactggttc tgttctagtt atgccctctc ctagtcttaa ctgccccagg cagtcttttt
      481 gaggccactt gacctgccag tcatatttca gaaactactg atatggtact tgctgattta
      541 gtttagattc caaacaggct agctgctgga ttacagacta atgacccatc agatgctaaa
      601 ggcaaaggct taaagtgcac tagtgaatta agcctcaacg ttgtctgaag ggaagaattt
      661 attatgtcat taaacttgat tcaataagtt tcatttcttt agatgcattg tactaagcaa
      721 gaaataagga aataatgcga ccaagggata ccatcttgtt tctcttcagg taaagcactg
      781 atattcaagt acagcatcaa gggatgccat tttgtagaat ttcggttata ttgataaaac
      841 aataggttga gaaaattgtg catagctgat caacgaacca tgggctcctc aacccaggtt
      901 cccttgaaat atatgcttca gttggtaagt acataggaaa gtgaggcttg cctgatttga
      961 tgagaccctc ggtgaggttt caggggcttt ccatcaaata tcaaagcctc agtggtgtaa
     1021 agatattagt agtaagttat agatggcact gggatttaat gcaaaactta atacaagcac
     1081 a
//
LOCUS       KCKM01001938             493 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30493apa ultra-conserved element locus
            uce-5992, sequence.
ACCESSION   KCKM01001938
VERSION     KCKM01001938.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 493)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 493)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30493apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>493
                     /note="ultra-conserved element locus uce-5992"
BASE COUNT          147 a           96 c           89 g          161 t
ORIGIN      
        1 ttggacttca tgatattttt tattattatt tcttgttcag ctcctgcagt ctcggtccct
       61 ttagcaaggg tcccctcaca aaggcaatcc ctgtaccaga aagcctcaga tttgccctca
      121 gctcttccat aggcattgat taggtgtctt ttatcttttc ccttttcaaa aaaaaatcaa
      181 aaaagaaaag ggacatgatt taaaactaaa atagagcgaa gcacattgta caaaggatta
      241 tttcaagtaa ttctccttga aactgtaaca aaggaatgtt tcctggggat taaatggact
      301 gtcaggtaat cagaaaagtt gttttaggtt ttcctcaaga agaaaagaag cattttggat
      361 ggattttgtt tctggtgctt tgtgacactt tacagcttat tccctcatgt cacaccagtt
      421 tatttcatta ttcataaaca tgctgaatgc caaaatgatc tgaggagcta tggggctctt
      481 acacgctcaa cca
//
LOCUS       KCKM01001939             539 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30508apa ultra-conserved element locus
            uce-1047, sequence.
ACCESSION   KCKM01001939
VERSION     KCKM01001939.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 539)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 539)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30508apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>539
                     /note="ultra-conserved element locus uce-1047"
BASE COUNT          148 a          120 c          104 g          167 t
ORIGIN      
        1 tccttttttt ttttgccatc tactgtctca ctacttccta gttaaacctt gtctcaagtt
       61 atcaacactc tggaaagata agcttcttct cacttacaac ctgtcactaa taatcgaact
      121 ttcaagactc catctcgaaa agagactact ggaggcacac aggtcacagg aattaactgc
      181 caccagtcct cgcagaaaac taagctcatc aatctatagc ttctcgtcat aattagaata
      241 acggctttga aaatttgggc tgatgttgac tccgtcttat gccacaaaga ccgctgatta
      301 aaatcttggt gtgaaagtta atgataagtg ctggtggcgt tgtcgtggtg acagggacaa
      361 acaattccct tgccgtgaca ttttcaatgt cctgcagaag aaaaactgtc ctctttagtg
      421 tggcactgta tgaagcttat ttatggctac agggcttgct ggattgatga ctgtcgtaac
      481 atactgtcaa atcctttact gacacattca ttttttgagc ccctggtgtg gcaggaata
//
LOCUS       KCKM01001940             727 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30523apa ultra-conserved element locus
            uce-6496, sequence.
ACCESSION   KCKM01001940
VERSION     KCKM01001940.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 727)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 727)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30523apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>727
                     /note="ultra-conserved element locus uce-6496"
BASE COUNT          209 a          142 c          170 g          206 t
ORIGIN      
        1 atgcttagat caggtggcac tgtctgttag aaaagcaagc tctgtaatga tattgattgc
       61 ttccaaggcc atattagaga tgaagacaag tcccaggaga caggttgttg tcaccttgac
      121 cttgggtcag agctagacca ctgacccctg acacccagga cttctgcacc acgtcgtgat
      181 atctttcatg cctgcagaca aagtcagcag gggacacgtg tcgatgtggc tcttgccaaa
      241 tcagaattga ctggcctgta ggaagctgga gagcagcggg aaatgtgggt taaagtatgt
      301 caataatgtt tcacaagaac aatttctccc aagaattgta gctgttggaa tgttttgaca
      361 tttattcggt agagaaatgt agcatgtttt gtgaagcact tcaagagagc tgctgctaac
      421 tgccgcggcg tattgatctt cctgttaaat tgcatgggca cacttgggag atcattgaga
      481 ttcaggcaac aggacagaaa ggatcggctg cacccgatgg tcactaatgg taattggttt
      541 cgatccttgc acttgaagaa gccgtgattt actcggttca cagatgaatt gtagacacta
      601 aatattttga aaagaaaata tactgtgatt tctttctctc atgtcattta caaattattg
      661 cctccacttc tgaatgtttc atatgaagta cataaatccc tatgactgga tatagaaaac
      721 aggctaa
//
LOCUS       KCKM01001941             897 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30551apa ultra-conserved element locus
            uce-3516, sequence.
ACCESSION   KCKM01001941
VERSION     KCKM01001941.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 897)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 897)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..897
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30551apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>897
                     /note="ultra-conserved element locus uce-3516"
BASE COUNT          283 a          163 c          172 g          279 t
ORIGIN      
        1 aaaaggagtc tataggcaag aaaactgctc tgcaaaatct aaaagccaga gaaaggacct
       61 caaaagaata aactcccaga cttccctgtc atatttggtg aagattgccc atcaactttt
      121 aggcatgttt ttcattatat gccagtgtaa acttggcaca tttgtggatc agaatcattg
      181 tgtgcttaaa aaacaatagc agaaattcaa attgattctg cattctgcac agagagggac
      241 ttcgccagaa gcaatataac ctaaaggtct ttggggtacc agtttagatg caggtttggc
      301 accaaaaaga ccagagaagt gggcagtaaa aatgaacagt aatgcgaaga tattttaata
      361 acggctgctc tgttttctat cttagtgcac ttctatttta tttgcacttt tgtagtttca
      421 tcttgatgac atggctatta ttttatagca gtttcaagca gttaattaat gaactgcata
      481 catgtgacat gacaccacct tgcccaatta tctctggcat ctatttttat ggtacaaagc
      541 actgctgctt tgtgaattat tttagattgt aaattggctc tggaagctgt tattttaata
      601 gccaaaacaa tacaagagca gtgcttgatg gctgacatgc agcaatgaca aattgccttg
      661 catgatctca tgaaacccac caaaggactt gaagatgttt gataatgttt ctctgttctt
      721 tagatgtaaa tatctctctt gttaagtctg ccaacacctc atgaagtcct ttaaaaagag
      781 cttgccatac tgctgacaac ctgtaaatgg ccgagcagta cagaattaga agagaatgta
      841 taatatagtt ttggactgat ttttcacagg atctcttttt tggtcatagc agaccaa
//
LOCUS       KCKM01001942            1087 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30566apa ultra-conserved element locus
            uce-6598, sequence.
ACCESSION   KCKM01001942
VERSION     KCKM01001942.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1087)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1087)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1087
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30566apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1087
                     /note="ultra-conserved element locus uce-6598"
BASE COUNT          302 a          259 c          220 g          306 t
ORIGIN      
        1 tgtgcgtgtt tagatgcatt tatacacata cacagttctc cctatgagca caccttctct
       61 ccagcctctc gttcagagag aaagagctaa aattgtcaaa gacgagaatg tgtattttcc
      121 aggctacttt gtcagatgtt cgcgtgtgca tcttataaat atttcatacc aaatatttaa
      181 cattattcct tccccaatcg gatcagcttt gaaatgctcc tcaaagtgaa ttctccccta
      241 acaatggctt gacgcaaaag ccttttttct ctcttaagaa gaggaggctg catatggtct
      301 gctaccatag cagcatgaat agttcttatt taatggaaaa taaaagatac tttacattaa
      361 ttcagtgggg gatggaagga tgggcacatg cgtaccttgt gcttcaaaca tggaggagca
      421 tcataccttg acctcccctc tcctggtccc atgattatta cccagtttgc attagaaccg
      481 taatgggaag tgacaagttt atgtaaatga tccacacaag gattttgctc ttgtaaaaca
      541 gagcagttac tctgggcttt ctaattattt catgccttgt ggttctgtga tggggcagag
      601 atgactatta cttgaaaagt atattgtgat tgacaagtca ctgtccccct ggaactcatt
      661 aaggcctgtg ctttgcaaga gggggtagga aaccctacca ggcacaccac gcacacacac
      721 acatccgcac gcacacgtgt cctcacccca gtgccggctg ttctttcaga tcatttgtgg
      781 ggatttttgc actggtagag aaaagcatca tctgcatgta tctcaaatga gtaccacctc
      841 ctggctacaa attgaccaat taccctctcc tttcccgttt tcattttaaa aatccgaaag
      901 attagcagca acacacctgt caaacatgcc gcagtctttt aattttagtg cactggatgg
      961 aaaactccac catgtcacag tacactattc aacaggggtc agagaggtgc tgggacaggg
     1021 gaccagggct accacaaaag ctgccaccat ttctgctgcc cagtgccttc caaatgtaca
     1081 aagggcc
//
LOCUS       KCKM01001943            1181 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30582apa ultra-conserved element locus
            uce-6906, sequence.
ACCESSION   KCKM01001943
VERSION     KCKM01001943.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1181)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1181)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1181
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30582apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1181
                     /note="ultra-conserved element locus uce-6906"
BASE COUNT          322 a          250 c          238 g          371 t
ORIGIN      
        1 gtggtttcct ttaaaaaaca catagacctc ctgtttctct ctgaccagca ctgctgggtt
       61 tggagctgag ctggacttgt gcgtgcttat ccatgggact gaagctgatc caggtctaga
      121 gcaattctaa ctcaggcttg gattttccaa tatgttttta taatcatgct taattatgtg
      181 catgagaaat aactaattat caaagtgcct agctttcctg ccccaggaaa acataccaca
      241 attattttgc cggttagatt ttgtaaccga cataactatt gttaccagaa aaggtactaa
      301 acatagaaaa tattatttcc ttctcatgag tgtttagtat aacaatataa gcactgaccg
      361 ttatgtactt tggtattatt ttcctttcct gcttatagtc ccttctcatg tttctccatc
      421 attttaggcc cctaataggg ataggatgaa cccattgatg tcggcacatg gaggcctgct
      481 agtggcatgc ctttggtttt agtctcctag cagcagccat tcatgttatg tgggctttct
      541 tttttgggca ttgcccaccc ctgaaactga cttcaggcat ttttcactgc ctgttctgca
      601 tgaatagcca caggcctctt gccaattgtc cccccttctt gaaagccagc ctcagccaaa
      661 ggccttttca agtgtgatcc cagagtgcca cacaggcttt cagggtattg ttgtcgagat
      721 gagggccctg cactggaaag tggggtcaga agagaaagca caataagggg tgatggaggc
      781 ttcatgcagt cctcagatgc tggcctgttt attaatttac aaaactaatg tcactgtctt
      841 tagagaagag attgagtgaa aaagatgccc tttgaagaga agaactgctt ttggtgcact
      901 accaaaacat cgctcccctt attaaattga ttttatggaa gcaagtacag ctaataaaag
      961 ttcagaaaca ccaataaaat attgaaggtc tggattcagt gttttctttt tttcctcatc
     1021 agctcagaca caattcatgt taatgggttt tacaagtttt ccttgggcaa aaaagatcct
     1081 taaatataat gggtgcaaat atctggtctt ccttatgcat gtcacatgaa ctattagtca
     1141 agacggtaca ataacgcaag ccctttaaca gaggtcttcc t
//
LOCUS       KCKM01001944            1121 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30598apa ultra-conserved element locus
            uce-7642, sequence.
ACCESSION   KCKM01001944
VERSION     KCKM01001944.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1121)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1121)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1121
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30598apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1121
                     /note="ultra-conserved element locus uce-7642"
BASE COUNT          287 a          266 c          217 g          351 t
ORIGIN      
        1 ggacagtctc ccctgagtgc ggtggcaaca gaagcatgaa aggatgtttt ctgagaattt
       61 tagaggattc cttgaaaacg atacagtatg aaaaccccac ctgacacacg cctgactttt
      121 tcaggaacgt agttggctgc aagaaaaatt tgatgctgcc ttagtttgtt tttcatgttt
      181 ctcagttttc cacctgcttt tcttggcttt ccagagagga gtgaagggct ccttgagagc
      241 cacctctggc gtgactatta caagagacaa tgaactcgaa catgcttctc tccctttttt
      301 cctccaaaga tcatgaactc ggaactcagt tgtgcatgca tgaaagttct ataaacatta
      361 cttaaacagc agccagaaga cctttgccag ctctggccta cttctcccct tgttggggct
      421 cagcactccc actcagttga ctacttgtcc tactctttgc cctctctgct ctgctgcaat
      481 tgtcctggaa ttttcctcta tgcaactgct gtccaagcca gctgcaccca ctacatcttc
      541 agcagtggac cgaggagggt attaatcata tttttgagga ggacactctg ctatttatct
      601 ccctgacacc tccagcgttt gggagcccac tgctgcacac agcccattga ctagtaatat
      661 tacacattac cgtgctccat tgcctctccc tgccctcttc attgagtgac tgttcaacag
      721 tggagttgtg tttgttcaat cagacataat ttataccttt tttttttgtt ccttctggag
      781 agctcttgct aattttaagt ctaagcactg cgttttccat ataattctag ctccgacgtc
      841 gctggaactg aacatagtca aacagatccg attccagact tgttcaaact tgttggtttt
      901 aagttgtgaa ataggtgatt tataaacaaa gtgtcaaggg agatcatctc atacttactt
      961 taaagatacg agttttattt catgtataag aatatatatc ttctgtctct aaagggaata
     1021 cctgcaacag cacgttgtac cgcgatcccc tggctattgt ccaacatgca aagtctgcaa
     1081 aggacaagag attaataatt cagttaattt atagcaagtg t
//
LOCUS       KCKM01001945            1292 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30614apa ultra-conserved element locus
            uce-1933, sequence.
ACCESSION   KCKM01001945
VERSION     KCKM01001945.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1292)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1292)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1292
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30614apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1292
                     /note="ultra-conserved element locus uce-1933"
BASE COUNT          365 a          224 c          285 g          418 t
ORIGIN      
        1 gcctacaata gagctcccat ttcaggtttt cctttctgca tttaggcttc ctttcatctt
       61 gtaaagggag tgctaggaat ttggggtctg tagcttttta ttgaaattag tgcttagctg
      121 tgctgacagt actgctagga aaaacaacaa agtgctaagt tatgtataaa gcttcaggat
      181 ttcgttttag tggaggttaa agttgccata tatttttgat ccattaggtg atgcaaataa
      241 ttatctcatg ctacagcatt ttccttgcat aattgacaga ataggtggtg aatcctttag
      301 accagtttgg tttgctcatt aggtatttgt tattagtcac acatggtact gttgaattta
      361 tagttaattt cgttttactt gaacaaagca gttttacagg ataatttcag attatattaa
      421 cgagagggca caacaggaag agaagaaagc agcatgataa acgttgtgac cttctagtga
      481 gaaacagtat ggcaggcata aagggctgct gcattaaacg gaggaggggg gagaaggaag
      541 tgggtaatta tttgtagcag tgcttttact gttgttggaa tgagacagac taacagtggc
      601 agcagtcatt ttgctgaatc aaagtccatg ttagtcgcat tatacactgc cacaaaaggt
      661 tgttaaggct ggtattagca tgtaccactg aggacattgg aaggactcga tctgtcacac
      721 taaatcgcct tcttgccctc aaccattgaa gtctccagct cctctgacat gttctttcat
      781 taatggcctg gccttgacaa ctgatcctaa ttgcctctga accgcacttc atgtattatt
      841 ggtgtctgcc tgccctggtt catgtcaaca agccgcagcg tgcgcagggt gtgcccggtg
      901 ccttttgctg aaatgatgct cacatagtca tttacctctg agggtctggg tctcactggg
      961 aatgaagtat aaagctaaag atcttcctgt ctcttcttag taatacttta atgtggatct
     1021 ctgctgtgta cttattaggc atgtatggag gctcagtaaa gcatcaagcc aattatgcac
     1081 gattccatta aagcatagac tgtagatgca aaataaaact tgtctgcatt ttagttactg
     1141 agtaagtgtt tgtttattca ttctgaaaag cttattcaac taggaagtat ggcttacact
     1201 gcatttttca taagtaaaaa ttctgtacta atttaaagga atagtataaa agaaatatta
     1261 tctgtaatat tgacagaggt catgtggatt ga
//
LOCUS       KCKM01001946            1039 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30630apa ultra-conserved element locus
            uce-3196, sequence.
ACCESSION   KCKM01001946
VERSION     KCKM01001946.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1039)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1039)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1039
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30630apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1039
                     /note="ultra-conserved element locus uce-3196"
BASE COUNT          322 a          249 c          218 g          250 t
ORIGIN      
        1 gtatttgatt tataagctga tgacgggata tcaaaattat tcagacttag agcaaagggg
       61 tagctctaca atgcttgaaa gcctttcctt ccccagcctc tgaagcagct ttattcagaa
      121 ttgctgccta agccatggag cattttgtaa cccagccttc ttcccacccc ttaacacctc
      181 ctcttctctt ttcccccatc ccatcagcac tatcccccca gcacaaattg ccacacatct
      241 gtacaaagga caagcagaag aataaggtga cagttcttta aggaaagaat aaaaatgcaa
      301 attaacaaac accaaatttg ctgtaaacat taaatacttc agacatgaaa ccttctgtgc
      361 tacaagagtg ctttcagcat tatctattca cagcagttcc tctgctcctg agggtcataa
      421 acactgagag atggagccag caaaaaagct ctagttgaaa ttcagctcac agcaaaagca
      481 atttccgagt gtgcaaagtg ctgtcagcag gcctgatgtt tgtgtatgaa atatagacaa
      541 tatgactggc ccatcggcag tcactgtcag cctgatggat ggggcctgaa aagaagtaaa
      601 gcggctgccg ttagggccca gtctatcaga cgcttgatgg agattcgggg gcttaataga
      661 ggtaaaagtt tcttctaatc ggacaaaatt tccagcggtg atcacaaaga aaataaaagg
      721 gatagcgatg tgatacgagg gcacaagcaa ggctttccca tctcagccac aatacaaaac
      781 agaagaggaa agcaatgcat tctcagtacc gaagaaaatt ggtatctttg ttcttggacc
      841 tcgactgtcc cagaacagac agggcagtcc tacagcaaac tgtgtacaca agcatcttct
      901 ggggttcccc atagcccagg cctcttacaa aatgaaaaca tcacctttgc aattgttttg
      961 gtgccctctt ctgccctgac agggaagtgg ctcgacacag caggcaggca ctcacaccgg
     1021 tgcagaaaca gttatgaaa
//
LOCUS       KCKM01001947             673 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30646apa ultra-conserved element locus
            uce-4975, sequence.
ACCESSION   KCKM01001947
VERSION     KCKM01001947.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 673)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 673)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..673
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30646apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>673
                     /note="ultra-conserved element locus uce-4975"
BASE COUNT          233 a          130 c          137 g          173 t
ORIGIN      
        1 cttaaaagtg ggagtttgaa gaccacatct cttctaaata caaacagaaa aaaagtatgt
       61 gcaatgtttc aggaatatcc tctaggtctc atctgatcaa taagtgtaga gaaaagtctt
      121 ttctgtccct atatattgcc acttatggtg gcaagcagtt gctacaaaaa gcttcaggta
      181 tttgcagata cttcagacag agcaaaatac agctcaggtc atgtgccaac ttttaaaacg
      241 tacttttatc tagctgctta ttctttgagt caggtgtttt gtcataacaa accaaaacaa
      301 aggctttttt tattgctcaa gatattcaat ggcttttgtg gtcctagcgt cagcaggaac
      361 gtcagaggat tgtatccaag gagctaaatg tgcaagacct agggtcaaag cagctgaata
      421 caccaacctc agaaaacaca gacaatgaat tgcaaatgac actcaaaaca aaacgggaaa
      481 aaaaccttca cacagaaaac tacaaaagaa ctccacagat actgaattgg ctttctgtac
      541 acactgatcc tgcttaactg tgtgtggtaa ctaaccaaac cttctgagac tgatagtcat
      601 aaaacagagc ctcgggggtg ggggaaacat aatgggatgg gggagaactg taagaaaaaa
      661 gattgcatcg gtc
//
LOCUS       KCKM01001948             775 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30662apa ultra-conserved element locus
            uce-4474, sequence.
ACCESSION   KCKM01001948
VERSION     KCKM01001948.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 775)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 775)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..775
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30662apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>775
                     /note="ultra-conserved element locus uce-4474"
BASE COUNT          238 a          137 c          153 g          247 t
ORIGIN      
        1 atgggcaatg gagaggaacc agcagatgtt atggaaaagg tgccttttaa aaaaaattaa
       61 gcagaattaa cactaattat ctagattgac catggatact aagaacatac actactctag
      121 tttctgtcat gatttcaatt acagcattgt aacttaaggt tttaaatttt attaagtgct
      181 tgtgctgatt attttttctt ggtggcctgc cccccatgaa tgcaaaaggc ttttttgcaa
      241 tttactctta acctatccac tgtgtattag acaactctat taattattat agactgttat
      301 tgcagctttc ctgaccttca cattgggtcc tatcttggct gatctaaatg cattgtttta
      361 atgatttcca aaaaaagaaa aagagaggag gaaaaaaaaa agaaaaaaaa attcaaggca
      421 agctttgatg tggctttagc tgcctcgatc gtctggccgc atctcagaga tgtgtcacct
      481 atgccgggag ggaataggga aatcacgttt tgaatggtaa tgataacata ctaatcactt
      541 cctttctttg aagatagaag cgagatattc tgtcagcatc cctggctgct agagcttgga
      601 ggcactggtc taggtgtatt agcttaagtg tgcatgtcaa tacagcttgc atctcccaag
      661 atccataggg gctcattaga gcaaggtaga tcgtttcggt agacagccac tcagataata
      721 tgtatggcac ctcctttttt tattattatt agaaagcatt tcttcaattt taaaa
//
LOCUS       KCKM01001949            1047 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30678apa ultra-conserved element locus
            uce-1059, sequence.
ACCESSION   KCKM01001949
VERSION     KCKM01001949.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1047)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1047)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1047
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30678apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1047
                     /note="ultra-conserved element locus uce-1059"
BASE COUNT          332 a          201 c          202 g          312 t
ORIGIN      
        1 ttgcaacagt ttgcagactt taatcgttgg tgcagggcca atagaactcc ttggatataa
       61 aattttggtc ctgagaggct gaaaccttct ctcctaaaga cccaaacagg tccacacaga
      121 ggtgtgatgg aattttgcag gcatctgtca agcagaggag ctatgcaaag aaaaggagaa
      181 aaaggaaaaa aaaaaaaatg cattcttttg acccaactga aatatacagc ctctaacgca
      241 gcctcagcat cagaactaac tcttaatatc tattatttat atctgacctg ggttaagtct
      301 tggaaaagca actcctgcat ttctagtggc caccatgaag gacgtattta tatggagaca
      361 ccccccatga aagactcata agcttcgtga gcacacctga gtagttctga agtgtgccta
      421 actagctgca cggagtgtca tggtgtgcac tgattgcctt atcttctcat ttatcacaga
      481 tgagttggaa ccaaccttgc tgaaatctac ttgcattgtc ctgataaaat tgcaagatcc
      541 atgttgtttc tgtatacagt ttcctgttga ggagctgaca tacacctacc ggattataaa
      601 tggcaacatt cataaaatat aatcaacact ctcataagct gttttactat aaccttctca
      661 ttgccagtgc tcagaatcca acttctaaca aatacagatg ctcagtgtag ctgtttaata
      721 atgaggaaag gtcaaatgaa aagacagata aaattgattc acggcgacgg tctcaacaag
      781 atctttttct tgctgttctt agatttcaga tcactgtaaa ggttgtaagc attctctcta
      841 actgatctaa tgtcaatatg tgtgacaaat aaggaatgat tacttcagct ttaggcatta
      901 ctgagatgca tgtgctttgc ggattttttt gtgtaaggta tacatgggcc tttcttatat
      961 gacaaaataa aatagcatta agtagcatct caggctttta tctgatattg gggaagggaa
     1021 gaaaatctat catataattt ttccaaa
//
LOCUS       KCKM01001950             802 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30693apa ultra-conserved element locus
            uce-442, sequence.
ACCESSION   KCKM01001950
VERSION     KCKM01001950.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 802)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 802)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..802
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30693apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>802
                     /note="ultra-conserved element locus uce-442"
BASE COUNT          266 a          152 c          158 g          226 t
ORIGIN      
        1 cactgttggt gcgagatgcc agctccctgc gtgctcctcg cgtcctccga cacctcagac
       61 tcagccagag cctcggagag ctgaggcaca aaactcaccc caaagagacc cagcttgacg
      121 aggtcccggc gtctccgact tcaataagtt gtaattacac aaaccgattt ctctctttaa
      181 tcatggggca agcttttaaa aggaaaacag ccaagtcagt caggttctac acatgatatt
      241 tgcgggcaga taattcaatg actgtggaaa attattttaa acgttaagat gcacaaagtt
      301 cagtttttcc ccgttcctgc tagtatcaca caagctattg ataagatgtc taaatttatt
      361 gcagaataat tctgcaggaa aagagataaa aggttcctga ataaaatatg aggcgagagc
      421 tgtaaattgt agcaatgcat atcatttcat tcaaatgtag gaagcaatta ccatctgcta
      481 tactcatcag ttccctcctt tatgacttaa ttatatgttt aatgctatca gatcaaggaa
      541 agggcacaat agatgaatga gtgaaagaaa tagaaaagat tcagcaacaa gacaaaaggc
      601 agatgaaaag taacccaaga acagaattga tttcatttgt tgggagagaa gttaatttaa
      661 atagtatatt ctatcatctc ctgtgctgtg ctaagataat ataaatcatg tgtttgtgaa
      721 tttgcttcat acaattttaa caaaagcatt caagtttccg aaaacctggg gtctgcaggt
      781 tttgatttat ttatgaaatg ag
//
LOCUS       KCKM01001951             872 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30709apa ultra-conserved element locus
            uce-2489, sequence.
ACCESSION   KCKM01001951
VERSION     KCKM01001951.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 872)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 872)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..872
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30709apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>872
                     /note="ultra-conserved element locus uce-2489"
BASE COUNT          267 a          181 c          166 g          258 t
ORIGIN      
        1 caagcatact tcagaagcta ctcgtagatt gctcagagga tactcacttt atcagatgat
       61 gcaggataat ttcagtaaat agtaaacagt aatttttctt tcataaccac ccctacataa
      121 attgaaataa agatattgta ctgtaaaatt gtactcactt ttgattagct acttaaaaat
      181 aaaattataa tcgagtatta ctaaaaaccc aaagaagaaa ttaatccaat tttcattata
      241 cctcaggagg tggattttat ttttttttaa cctgctgccc tgtcaggcct tattattttc
      301 acaaagatct gacaatcgtg gggtcgtatt tgttagctgc ttgtgacaac attcaaaagg
      361 ggcactatat atcaccaaaa cagctcacaa actggctagt cacattattt attatgagcc
      421 acacatgtga caaattattt aactcagtga ctcctaataa gtcaaagagc aagcaattag
      481 ctaacgcagt atgagggctg tttgtggcaa tttatagatg ctctcaagct gtcacagcac
      541 ttcaaagtac cattaggggg ggaacctctt aatgactcac ttgagatgac aagcattaca
      601 cagcacacat ggcagcgatg aatttggcag cagattctgt tacttgaagc ttcctcccct
      661 tcccccccac ccagctgttt acacgtttcc agtttgtatt tccctcctgc aagttgctcc
      721 tcgctggaaa tttggagagg aaggcactgt gctcctttag agccaagcaa gtgctgttca
      781 aggccactct gtgggtaaat cctggggact acaagaaatt tggagagctg tgtgactctt
      841 agctaggaga ggtaatgcag gtaaaatctg ct
//
LOCUS       KCKM01001952             894 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30725apa ultra-conserved element locus
            uce-2515, sequence.
ACCESSION   KCKM01001952
VERSION     KCKM01001952.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 894)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 894)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..894
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30725apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>894
                     /note="ultra-conserved element locus uce-2515"
BASE COUNT          292 a          157 c          154 g          291 t
ORIGIN      
        1 tccaacctca agatgcatcg ttgacgtgac gactttgcaa gggaccatta tttaacacac
       61 aagattgttt aatgttagga tgtgagagtt tcccatgtca tgactgtaat agaatttgtt
      121 tcattattaa ctgtagcata ttaatttatt tgctgctatt attatgaagc tttcacatca
      181 acaagaaaaa tgcaagttac cttttgtgtg tctgaatgag aagtgttaat tcaaaggttt
      241 gtctaagttt gtgtgcttat ttctccaact gtagcaatta tttcatggtt cgtaatgcca
      301 ctgatatgat aaacaatatt tatgcctccc tgtaaaacat tttataactt tcttttaatt
      361 gccttcacag tctttaaaac tgtagcttag cacttcaata ataagcttat taatttgttt
      421 aacgtttaag ttcttacaaa gaaagagaca agcattaatt ttgtttagtt aaaacaagct
      481 ttgcttttga acagcaggtg gtaattgaaa caaaacaagg gctcattaga ggagcgtctg
      541 gtggctcatg atacaaacag agcacactac aaaacccaaa cacaagagcc ctgaaataaa
      601 gtggtcatca tctaattaac agaacatgtt ttaattaccg ggtaaaccat gcagcgcagt
      661 gtgtcaattt aactgatgtg ctaagtgcca gtttacaata tcagaaacag acaaataatt
      721 ggaatctaat tacatccagg tctattgcac accagtgcct caagcccatc ttaataaaca
      781 agtttttaca tcaaaccatg aatagcaaat acagccgtgc tgttaattgc tacattgtga
      841 tattgggact ttgccagctt tgactattaa aataagctct tgtgtggatt gcag
//
LOCUS       KCKM01001953             697 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30741apa ultra-conserved element locus
            uce-3812, sequence.
ACCESSION   KCKM01001953
VERSION     KCKM01001953.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 697)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 697)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..697
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30741apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>697
                     /note="ultra-conserved element locus uce-3812"
BASE COUNT          166 a          141 c          194 g          196 t
ORIGIN      
        1 ctctttcctt ccttgcttta ccgtaatagt tagccctgga gaaagttttg ggatcttgag
       61 atgcataccc agtctggctg ctttggggtg caaaggccat tttgggagat ggacctcctc
      121 cctgcctccc ctctgtggaa gggttgatgt tggaagcatt gctccatgtt gcgcgccatg
      181 cggcgagtca aactccgcta agtaactaaa taaagatgta attttaatga tgattaaatt
      241 gaagcacctc attaatttca tgtgagaggt ggggaagtac acggcagctc tttccctaaa
      301 ttcattgttt gtctggccgc gagacgtccc ctctcaacgt ctggttgagt ctaatttaag
      361 aatgtaaatt taatggttca gtaagtaaaa ttgcctttat tgtttggaat ggtttgcaca
      421 gtaatttacg agctagcaag gctcatttga taggagtata tgatggagta ggtgactaca
      481 gtgaaggacg tgtttatctt aaggatacag gggaagaacg cagatccgca gcatctgtaa
      541 tcagggacct tgggataaca gcgctgcctg gagactcggg cgtgagctgg gtccttgggg
      601 tgaaggagcc ccgagatctc ggtcgttggg cacaccgagg cgtggtgtgg catccctcgc
      661 tctacatggt tctgtcactg gagacagaag tgagagg
//
LOCUS       KCKM01001954             742 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30757apa ultra-conserved element locus
            uce-4719, sequence.
ACCESSION   KCKM01001954
VERSION     KCKM01001954.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 742)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 742)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..742
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30757apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>742
                     /note="ultra-conserved element locus uce-4719"
BASE COUNT          242 a          134 c          135 g          231 t
ORIGIN      
        1 agatctggac agtgattaac tcattgcagt ggactatatg caagcacttt ctaacagaag
       61 aaagtaacag ctgcactgcg tttacacata gttatcttca ctgatttatc agcttgcact
      121 cagaacaaac ttttcatctg cccttgtctg caaagccaag ttattgtaat ggaggccatc
      181 agcaggcaaa gaagggaagg aatttaaaag tttgggagaa atgcatgtca aaatctgttt
      241 aagacaatat gaaaacctgc tcatgtacat acaaataggt gaaaattctt tttcagcttt
      301 atttacctga gaatgaattt cagtttgaag aggcctttat gtcgtttcaa gcaaagcacc
      361 taagatataa gcaattttca acaagagtac tacacatttg tctttataac attttgtatg
      421 taacagcttt tatgcaaatg acactaaagt ggcacctttt ttctaaattg gacattttta
      481 tggttataat tttcttctgt aataacagca aaaaaatggc tgtcccagtg gagttgagca
      541 tttcatctct agcgctattt tgtgaagttg gaatgacaag tttctttcat ttgtgcaaag
      601 aatgactttt ttgtcattct tgtctgactt ggttgaagca gatacacttg gaagcagcac
      661 cagtcccctg acaccaaccc cttctctgcc agcaagaatg gtatcataaa gtcagaagaa
      721 aacttaaagg aactaaaaaa ta
//
LOCUS       KCKM01001955             548 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30772apa ultra-conserved element locus
            uce-6398, sequence.
ACCESSION   KCKM01001955
VERSION     KCKM01001955.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 548)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 548)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..548
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30772apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>548
                     /note="ultra-conserved element locus uce-6398"
BASE COUNT          173 a           99 c          101 g          175 t
ORIGIN      
        1 aaagttcttg taaaattaga agacatagcc cagtccttta attagaatac acggtgaata
       61 gggatagcat atggagggga atgtcaagaa aagggtgcca ggggcagatc ctaggaaatc
      121 tgtattcatt tctgcctcct atttgttcag taatctctac catcataact aaatcttgga
      181 gcactgatgt agttcgagtt gttgttgact caacgtcaaa attcaatcac tgggggtttt
      241 gcatcagccg ggctacttat ttgtctaata aatccgtcat tttgtaagaa aaatatttga
      301 gcagccgtac ttgacctctt ggtatccaca agccacattt atttctacca gtttacaaat
      361 gcaaaacgga gatgaacatc ttaacgcctc gaggtactgt gttgatttct gattggattt
      421 tagatggaaa tgtctatttt aaataccccg tgattaaatt gtacatataa tagaattcat
      481 gcctctcaaa tcaaatcctg atttgcaaac cccaatttta ctttaggaaa aatattattt
      541 aagcataa
//
LOCUS       KCKM01001956             850 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30788apa ultra-conserved element locus
            uce-7697, sequence.
ACCESSION   KCKM01001956
VERSION     KCKM01001956.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 850)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 850)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..850
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30788apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>850
                     /note="ultra-conserved element locus uce-7697"
BASE COUNT          213 a          255 c          226 g          156 t
ORIGIN      
        1 gcagagaggc aaatcccttg tctccagagt acagggagca tcggcacatc tgccgcttga
       61 gccaatgaca gacacaacca cagaggctgc agaaactgcc aggcccaacg cgttccctct
      121 tgtgccatgg aggcagtcaa tccgtttgaa gacctgcaga ggacatcatc gtatgatcac
      181 tgacacccct ccaccaaagc tgcccctgaa tcccatctgt acagccctca gctcccctgc
      241 tacaagcagg agggggcagg agacccagag gcagtggcat gggagaagag acaagcaagg
      301 gctggtaaac accccccgcc cgtccccaat cccagtactt tgaagatccg tgtgttttga
      361 atttaatttt gattttctcg acttcagcag attaaagttg aaataaccta caaattactt
      421 aatgtgttgt aaatcttctg aaattaaggc ctaatgggta acacatgtcg gcaggcagga
      481 gacgcggagg ggaagcaggg tttctcacca gcacgaggaa tgctgcgggg atgcgagcca
      541 gagcagaggg ggctggggaa ggggatgtgg agtcacagcc cttccccacc aggctcccag
      601 tgcccacctt gcctctgggt ccgagctaag aagccacccc gggccgcgcc atccccacac
      661 ctcctgccaa aggggacacc agctgccggg gccacactgg gagcctgatg aaggacctgg
      721 gcggcaggat gctggtgggc tagcgtgggc cacatgccaa agaaaatcca cttcaacacc
      781 tcattttcca gctgccctca ctgctcagac cttcagcacc tcctagagcc ctgtccccaa
      841 actagacgtc
//
LOCUS       KCKM01001957             865 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30804apa ultra-conserved element locus
            uce-3093, sequence.
ACCESSION   KCKM01001957
VERSION     KCKM01001957.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 865)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 865)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..865
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30804apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>865
                     /note="ultra-conserved element locus uce-3093"
BASE COUNT          264 a          167 c          137 g          297 t
ORIGIN      
        1 ttaggaaatt aatcaatagt caggatgata atgatcaaaa agaatattca tggaccataa
       61 ttagtgatct tctgtcttta gtttttcctg acaaatataa tgttctgatg aagttgtagt
      121 ttaattaact tcatcttaac agtatctaaa cccctttttt ttccaggact cagccatgct
      181 gtcatacgcc tacagcgatg ttgccattgg tcttgacata atcttcctgt atgtactgtg
      241 aaaattgtat ctatctttac tacgaaattc atgaagaact ctgattttga gcaactgttc
      301 aaagagcttt ttatccttcc aacctgagca ttcatgtttt tatattttgc tctgtgagga
      361 gccactcaaa aaagggattt ttctcctgcg tcttactttc ctccttccat tgcctttccc
      421 aacacctccc tttcataacc tcatctggat acctattagc tctctctttc aataacactg
      481 ctctggcttc tacgaaagtg ctttttaatg taggagatgt acttcagcca taacaccggg
      541 gtcactttct gagtaacatt ttatgggatt gattaaactt taacaccata actgttgact
      601 ttataggcca aggaagagac actgagtgct aagcttggga taatttgcgc ttcacaattt
      661 tttaaaatca gatacaggta gagtttaatg tgtttgataa agcaacccgc tcttcacacc
      721 agtgtcttct attgtaaaaa acccacaaca tttaacatga aataaggtct ttaacactaa
      781 tgaagtgaag ttatagtaaa taaccatata aaaaagaagt gtttaactct atgggaagaa
      841 tatgaaaaaa gatttaattt gctct
//
LOCUS       KCKM01001958             644 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30819apa ultra-conserved element locus
            uce-6700, sequence.
ACCESSION   KCKM01001958
VERSION     KCKM01001958.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 644)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 644)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..644
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30819apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>644
                     /note="ultra-conserved element locus uce-6700"
BASE COUNT          211 a          120 c          108 g          205 t
ORIGIN      
        1 tctccttcca gggtccccat ctgtgaagca aatggacaga ggataaagga acagcctgta
       61 gcactttcaa tcattatttt cattgattgt gtttagctta aataatagga agtataccta
      121 tgcctatgta aaatcacttt gcatttcact cagcccctta gaatacacca ggatgcccaa
      181 gcatcccaac attgctaacc tctgtaaaat gcaataggaa aaagtggcct aaacaaacaa
      241 aatgttgatc tgccttttat taatttcatt ttttatcttc ttgtatacag acgtttgaca
      301 gctgtgacat tcatgggcaa tgcatttgaa aaagaagaca taaatattca gagacatatt
      361 agaatgctgt tcaatgtaag cacctgtcta cttagtgttg acagaaaatc atttactttg
      421 ctttatgcat gttctctcca gagactacag aggtcctatt ttatttaaag agctggcccc
      481 aacatcagta ctagctcttg aaaatgcaat atatacagct aattgtattt attaaggaaa
      541 taactttggt ttatattttc aataatactt aaacaatttt ttcaacctct acttcagaat
      601 ttccttccct tgggaaaatg aaggaggaaa gggaagaggg aatg
//
LOCUS       KCKM01001959             416 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30833apa ultra-conserved element locus
            uce-7858, sequence.
ACCESSION   KCKM01001959
VERSION     KCKM01001959.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 416)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 416)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30833apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>416
                     /note="ultra-conserved element locus uce-7858"
BASE COUNT          134 a           61 c           54 g          167 t
ORIGIN      
        1 gatttttaaa taagtttctc tattttatgc atatgtattt tagaaagaaa tggtgtagct
       61 tagaaataaa atgctacatt tttcctgctg ttattaaatt atattaaagt aggaaagcac
      121 ttaagcagaa aagtgtgaat actgccaatc tccaaatgta acgcttatta tctttaaaag
      181 cattttgtta cttttataat acctgaagtg atataatagt gtcagtcact taaccacatc
      241 ttagagtata atatcttcat cttaagtact attatttcca gtattttaat aatttcacac
      301 agtcctgaaa tgtgatcttt tgtgctctga tgacacttaa attaatagca taattttctg
      361 gtacttgcaa cagttgcttt ccattttgat tttttacatt tttctatatc gcatac
//
LOCUS       KCKM01001960             494 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30847apa ultra-conserved element locus
            uce-3539, sequence.
ACCESSION   KCKM01001960
VERSION     KCKM01001960.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 494)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 494)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..494
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30847apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>494
                     /note="ultra-conserved element locus uce-3539"
BASE COUNT          139 a           98 c           98 g          159 t
ORIGIN      
        1 ccctgacaca tctgaccagt gaagactcta ggggtggcaa attaatagaa gcattgcttg
       61 ttaattgcat aagaggaaag ccaagaattc atcacctcag tcatggccat tgcttccctt
      121 tgaccccctt ctcccacaag gcttttgctg gtggtcacat ctgtggtttt tctgtatcct
      181 acgtatttgc cgtataatta ttcagcatca aaccttatta atcaaatcga tgctgtgttt
      241 taaatggaaa ttgctggatt aatacaagct ttcatttcat cctggaaatc ttgatggctt
      301 tagcacatgg aatccaattg gaatataaaa gaagggatgt agagacctga ttgaattagg
      361 agaggcatgc tgcacattaa attacatatg ccagcagggg tccatgcttt tatagtaaaa
      421 tactactgta gagtgtatac atcttatacc tcctgtgatt tctttacact ggtcagtgct
      481 cttgtgctat atag
//
LOCUS       KCKM01001961             815 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30861apa ultra-conserved element locus
            uce-5724, sequence.
ACCESSION   KCKM01001961
VERSION     KCKM01001961.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 815)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 815)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..815
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30861apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>815
                     /note="ultra-conserved element locus uce-5724"
BASE COUNT          245 a          145 c          164 g          261 t
ORIGIN      
        1 tttgagaatt gttagatgca gataatacga tgtggatttt aagactttag atcctaaatt
       61 cgatctttag agcggtgcca aatggtagtt gtaacagaaa atctcatcct gaaatactct
      121 cgggaagatt attaaaatac tacaggtact gacatcagct acaaagatct acttgtgcat
      181 atttctttaa aggggaggaa aaaaacgcct taatacacag tattaccata gctaggccct
      241 attatactat tgtaatcata gctgaagcaa gaacggtgat taacgatggc aatttattgt
      301 atctgacgag gggagaaaat aggagatgtt gtcgttatca taaatcatat cataaataac
      361 caaagagaag cactcagaaa gcttgtgtgg tgtcagcagc aagccctttc aggcacgtta
      421 gcccaggatg tagccataga aaccccaaag tcatattgtt atcttagtct tgctgcagtt
      481 atgtgataca acagtattaa catatagatt aggccattta taatactagg tgtcatttca
      541 ggttggcttg cttatatagc attttagttt tttattgtgc cgaatgttag ggaaacgctg
      601 catttttaca ggtcagtata gagccattta taacgtatcg gcttcacacc tctgtcagtc
      661 tcgctaatgt actctgttat tgattggctg tgctctgtga attgtcgttg cctaattacc
      721 ttgtctttgc taataatttc attttttaga agtcaaaatg ttcctttaaa gagaaaacct
      781 ccgtgcctgc acgtctactt cggggcaagt tgccc
//
LOCUS       KCKM01001962             257 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30877apa ultra-conserved element locus
            uce-33, sequence.
ACCESSION   KCKM01001962
VERSION     KCKM01001962.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 257)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 257)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30877apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>257
                     /note="ultra-conserved element locus uce-33"
BASE COUNT           82 a           52 c           34 g           89 t
ORIGIN      
        1 ttcaagccta tgtactaaca acaaaatgtg gctcacacac tgattagaac acttttaatg
       61 aagaatttta ttcaagattt tttcattact ttattcttgg tagtgtgaac tgtgaattaa
      121 gctgaataca aaaggttttc actgcactga attacctgtt tcaccttgaa aagccacaca
      181 aaatgaagct cttaaagcct tttgaaaatg acctttttcc tcagcaatga tttatctttc
      241 ccctcgaaaa tcccttt
//
LOCUS       KCKM01001963            1052 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30891apa ultra-conserved element locus
            uce-2080, sequence.
ACCESSION   KCKM01001963
VERSION     KCKM01001963.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1052)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1052)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1052
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30891apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1052
                     /note="ultra-conserved element locus uce-2080"
BASE COUNT          340 a          184 c          191 g          337 t
ORIGIN      
        1 gagaattaat attgactgtg tatagagcga cagcagtact ccatctatcc acagaatcat
       61 ataaacatat ataattactc tgaaaatcta atctatttct ggatgcttgg tccatgtgat
      121 aacttttgtt tcactgcata aaatgataaa tgatatgcaa agaagcaatt atggccattc
      181 ttgaattgga aagagataga aatacacact ttgtaaatac aggtctactt ttcctaaaag
      241 gcgtttattt ctctaatttt aaaaatgtat gtgttggtat atggatgaat gttggtgtgt
      301 ggatgtttac ctgtcggtgt ggaagtaaaa tgaaaaattg tgtctttgta tatactgctg
      361 gttgtatgta taagcatata ataattcaca gccccgtaag ctcttggtgg acattcctgc
      421 ctcagtcatt cagctcctac catgaaagtc ccctaacaaa caggattaaa attcactcct
      481 ttcaaccatc ctaggcattt attccttcct tttcattgag ctacatttgt ctgatttaac
      541 aagataagat ttgagtgctg atgcagcccg ttgttaatgc agcagccgca tccaccatac
      601 catcgacact atgcatcaga gggatgcata aatcaggtat tcaaaaaaaa ttagatatgc
      661 agcacaccag ttttatagtc ccagcctcag aaattgaaat ggcccagatt aatgtattat
      721 atcttacaca ctgtccgagt gaatcaactt taatatattg aacagatttg cagaacaaga
      781 ctttgttatc taaggagcac tcggaagaag gaattgacct gaggatttga tttggttcag
      841 gtagttcatg ttgtacggcg gcatttgaat agtttcacat aaaaataaaa tttgtatcag
      901 aaatatttca catcattcta ggcttgttca tattgaagct ctgcagtggg gcagtattac
      961 agaaacaatg tccagcaaaa aagatgattt taacctttgc ttcagacatg tcgaaacaat
     1021 ataatgtaat tttaatgcaa actgctgttt ca
//
LOCUS       KCKM01001964            1011 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30907apa ultra-conserved element locus
            uce-4968, sequence.
ACCESSION   KCKM01001964
VERSION     KCKM01001964.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1011)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1011)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1011
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30907apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1011
                     /note="ultra-conserved element locus uce-4968"
BASE COUNT          249 a          201 c          232 g          329 t
ORIGIN      
        1 tttatcggag tccctctgtt ctagggagta gaaggatgtg caaagactaa gtggtctctt
       61 gtgatatttc cagctagaga aggcttgagc ttcgacctct tccaatggtt tgttttctaa
      121 aatgcaaaca gagggacccg atggggttgg aaactgggtg acgctcttca gaacgggctt
      181 acaaatctcg ttgcagtaca gtgaattggt gtatggcatt agctttccac tgtatgactt
      241 atttcggata gcgctgcaat acccatctga atctagcgat aagtagcttc attatattgt
      301 ttgcatttgc ttagaacgaa aaccttctcc tttctagcca cagattaggc aagagaaaga
      361 ccaatttgca gagctcgtaa atgccacttg ttaatcatat gcagtacaat tattaatttt
      421 tttttctttt cccccttgga tgtattaagt caacttttta gctttttatg taattgaaat
      481 ttgtcctttt gttacctggg catgaattat ttttgaaatg ttgtcattac ctgccctgct
      541 gtgaggttta tctcttctgt tcatcctaat taaataaaac atactgttgt ttgccagtct
      601 tgtgttgaag cgaattacct gcctgaaggc ttgggctagt gtcgggcaca cttcttgcag
      661 cagcagccgt tgactaacac atttactttt agattttcct ttcaaagggc tcagtttgtg
      721 cagtgtgaca ggtgaacgga gaatgctata caggactttc aagagctgaa caaacagtaa
      781 aggacttatt gctaccgcag tggagcggca agtacaaatg taaggcagcc tttgtggcag
      841 aggagtgttt cctttgccgg ataaaggcca ctcaggagac ctgaagggct tgcttgggta
      901 tgttgggggt gaaataatct cagtcatggt ctcatttaag cccaccctac ctgcgtgttc
      961 tcctgggcaa tttctagtgg ggttgatctc agctctcttt gtagcatcac c
//
LOCUS       KCKM01001965             763 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30922apa ultra-conserved element locus
            uce-5080, sequence.
ACCESSION   KCKM01001965
VERSION     KCKM01001965.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 763)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 763)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..763
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30922apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>763
                     /note="ultra-conserved element locus uce-5080"
BASE COUNT          239 a          126 c          129 g          269 t
ORIGIN      
        1 ggaaattggg taattatttt cttggtcaat aagcacgagg atgtcctcac agcatagaca
       61 tttaatagtt cactcgttta taagcaatat cactgttaaa atgttccgat tgtgattttt
      121 ttcatgatta atttaagact gaaaaagcat tatcatatgg cattgtctaa taaactgtat
      181 gataaattaa ctgagattta aaggcaattt taaatcattc gcttcagcat ttaaattata
      241 gttacaggct agatgacttt ctatgcacgt gaactctatt attctgtcag actgaccagt
      301 ggccttgact gtgcaaaggt cagtggtcac agttgtcctg aattaccagc ccttttttca
      361 tgtggaccct ctgctgcgtt gcatgctgta atcttcttaa tggcttcatt ccaatattca
      421 cacataatat tttagattta ttgactgtta gaaatactac catgccagta gcagttccgc
      481 tactcctaag gtatttaaaa ttggaaaaat aaatcagtgc aagaccttca ggaatccttt
      541 gttttcttgg aggggggaaa aaaccttctc tttcctgtct tctgacaaaa acatttggtt
      601 ttgaatatca taatttcact gtgaatttgt ctattttttt taatttaaaa aaaggcaaaa
      661 aactaatagc tgcttctgtg ggagtaaatt tcctaataca ataataccta gatcatgact
      721 ttaatagtgt aagaggttag aggaaaaaca tttatcatgt ata
//
LOCUS       KCKM01001966            1144 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30938apa ultra-conserved element locus
            uce-19, sequence.
ACCESSION   KCKM01001966
VERSION     KCKM01001966.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1144)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1144)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1144
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30938apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1144
                     /note="ultra-conserved element locus uce-19"
BASE COUNT          408 a          196 c          206 g          334 t
ORIGIN      
        1 tcagcaagct tctgtctttt cacagctata tagtctaagt aatgggaaaa tactatactg
       61 caactgccaa aaacgttttt catcctgaca ggggaaagac aaagggttcg ctaatgatat
      121 aacatttatt atcaattcag tcaattcttg acagagaatg aaggaagatc atttgatatt
      181 taaagggatt gtatacttag ggtatattga attatccaaa gatcactcct aaggagaaaa
      241 cagaaaataa tataccattt atggagactg aaagcttctt gaatgtaagt cctagctgca
      301 acttaccttt aaccttgagt gtctcttatt tccttttcca gtatctataa agtcaagaaa
      361 actgaacaaa gggtacaaac tgagggtact gcaactacca gagagggaaa gcaaaaatga
      421 tttcaaattc agagtttaaa gagttaaaga agtaatacta tttaaacagg gttgcagaac
      481 tcctattaaa aatggcagta ctataaatgt tctagtattg tcaggaatgt tctgttggat
      541 gacactatac tgtgatttgt acacacagcg gaccagagct gatgggtgaa tgaaatgatc
      601 cataaccctc actgacacat ttagagcagt tcagctgcac acagagaaca gtccatcatt
      661 tgcacccttc tgtgaaagct ggctttacca agtgtttcaa tgaaatatgt gcaacttccc
      721 atttaaatta gtaccacatg aaccatgaag agcaccacag gtatctgttg tagtaccagc
      781 ctaatgcaaa agtggcctgt cttgtaatgc tctaacagga aagacataca accattcatc
      841 tgtaacatat taaaaccaga agaaataaat tactctatag atgaagaatt attgcttgtg
      901 gagagaatgt gcaaaggtag ttctaaaaag cagcttttac taaaaaatta ttgcaacagc
      961 atttgaattc ctaatgcata ttaaacctag ttcgcataat cataaatcat catttttaaa
     1021 tcaagaaaat ctgcttgaaa ctttttaaag gtttatttta ctagttcaga cctatttcag
     1081 cattaccact gagggaagca cagtaggagt gactataagg gtgaaatata aagtttaacc
     1141 gttt
//
LOCUS       KCKM01001967             609 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30954apa ultra-conserved element locus
            uce-3402, sequence.
ACCESSION   KCKM01001967
VERSION     KCKM01001967.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 609)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 609)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30954apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>609
                     /note="ultra-conserved element locus uce-3402"
BASE COUNT          205 a          110 c          113 g          181 t
ORIGIN      
        1 gcatttccta accagctgtg ggatttacaa tgcagaacat gtgatttttt taggattaga
       61 ctgtgataaa agcaaacaaa agagattaat caaaacaagt aaattagtat tacccatctt
      121 agatgttctt taatgcaaag ccaatagctc ttgcccttta tgcacgtgct cctacagtaa
      181 ctaatgtaca gtgcccatca acaaattaca actcgtgaca cttttgctgc tgcaatatta
      241 agcccaaagt cctatggaga aaatatatgg gttttattac caaattgttc ttgtttacaa
      301 ttctaatatc ctcttcatta tctacttttc cagacatttt aggcagttct gaagacctgg
      361 ggcagcacta gtcctgtcat aaagagaaat taatgttgtt aaagatggcc tagctgccct
      421 ctgggacagc tgaagatgtg aaaatatagg gttctgtttt aaagatgaaa atgattaaag
      481 gcacaggcac cttgctctta gtgcagccac taaaactttt aataaaatac ttcagcagaa
      541 aaaagctgct ttacttcttc cactataagt cttaaggaaa aaaatgagag agaggtgggg
      601 agagagaaa
//
LOCUS       KCKM01001968             746 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30968apa ultra-conserved element locus
            uce-4038, sequence.
ACCESSION   KCKM01001968
VERSION     KCKM01001968.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 746)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 746)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..746
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30968apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>746
                     /note="ultra-conserved element locus uce-4038"
BASE COUNT          254 a          118 c          132 g          242 t
ORIGIN      
        1 attatcaagt attttcaatg tcatcagtga aaggttaata gaagctcata attttcagat
       61 atatcttttt gattagctgc tcagaaattt ccttaaaaag ggggtgtaaa ttgttccaca
      121 ctgaaacccg gagactgtgt ccaatttgtg cataaattga aattgtcttt ctaatagact
      181 cttcggaagg tgtggggttg ccttcaaggt aatgatttaa acataaactg acccttgatg
      241 agggagttgg agtttcagtt taatgcgttt ctgcagtttt ccttcacctt cggtgccttc
      301 aaattccgca caaataattc cttcataaca agtgcctttt cagaagatgt atgctgctga
      361 cagttaatat aaaattattg cccctgaatg catttttgta attacttccc agagaactgt
      421 ctttgtgtta gaagacattt cacactttag taacataagt gtttggggag aacatgagta
      481 ataattacaa gcagtctttc agtgaaaata aacctaaaaa ttataaaaaa agctaatgtt
      541 aaagttggtt agagacagtg aggaatttat ttagcacgtt atgcctgtct gtgtattttc
      601 caagtttaat aacccttcag taactaaact ttaaaaaagc aataaagaac agagaaacgg
      661 ctttctaatt tttaagcaat aatgaaacta aaaactgatt acaagtgaca tgctactagc
      721 aacagaataa agaaacttaa tctgaa
//
LOCUS       KCKM01001969             273 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30983apa ultra-conserved element locus
            uce-5243, sequence.
ACCESSION   KCKM01001969
VERSION     KCKM01001969.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 273)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 273)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30983apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>273
                     /note="ultra-conserved element locus uce-5243"
BASE COUNT           90 a           48 c           56 g           79 t
ORIGIN      
        1 ggaaagagag aaaatgaaat ccagatttgt aattcctaac aggagaaatt cgatcctttc
       61 caatgtttaa gtaatatttc ctgtaaaaca tacgaggcca tctgcagagc tgtttccaga
      121 cacattttga agtggcaagg gcaactgaaa gagacccgaa tggaggctgg catttcacct
      181 ctgggagatg gagcattaaa ggttttctca aagctggttc tacaatttta caaagtattc
      241 aaccactgca tagttcataa tttgtttaat tta
//
LOCUS       KCKM01001970             916 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 30999apa ultra-conserved element locus
            uce-6856, sequence.
ACCESSION   KCKM01001970
VERSION     KCKM01001970.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 916)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 916)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..916
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30999apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>916
                     /note="ultra-conserved element locus uce-6856"
BASE COUNT          277 a          178 c          176 g          285 t
ORIGIN      
        1 ttccacccac tttacatctg aaatattaac tgctacttct gtccctgaaa cccaactaat
       61 ccattgtgtt cctttctgtt ccctttctat aagtttttaa tttgttttag tgatatttgc
      121 aaagctttct cacagcccga tagcacttat tgcagatgta accgtgatct tttgtaatca
      181 gaaataggta taattgggtg tctctggtaa aggagctcaa ctgtcagagg attaagccac
      241 atcctgatca atggaagtga cttcctagaa aacaggcagg gaaagatttc ctgtagttaa
      301 cagcaataaa ggaaaggaac tttaaaaaca agtctctatt tgataactgc agaaatctag
      361 ctaagtctta gggatttagc cagggaacat attggttcca gcagactatg gtaaagttaa
      421 ttaaggatga ttaatggagc attttccttc caatgatatc tgtgacagaa caaagctgtc
      481 tgaggcttgt caagcagaat ttgagttgaa tgagtattta tgtgatcaaa tctgaagggc
      541 tgcctcttga cagagcaagg attcatcaat caattgcgct ggcttgcagt ggtgggaaat
      601 tggtctatca gcatagttcc actcccatcc cccatttttt cattcaatca tcccttaggc
      661 tacaatgcat ctttagcttt tacctctgac caccttaagg gctatcagag aaaagtaaaa
      721 gcaagagcta aaacatctat tatagtggtt atttctcagc tgtactcaca aaattgattt
      781 cttttaagca gaggcccagg cactgtaaag cgatacaagc ctgttcaatg aattaattgg
      841 ttttaataga aatttagctt tgagcctgaa gaatatccag tgctctcctg ctagaaagtc
      901 ttctattagg gaaacc
//
LOCUS       KCKM01001971             989 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31015apa ultra-conserved element locus
            uce-3688, sequence.
ACCESSION   KCKM01001971
VERSION     KCKM01001971.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 989)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 989)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..989
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31015apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>989
                     /note="ultra-conserved element locus uce-3688"
BASE COUNT          288 a          202 c          194 g          305 t
ORIGIN      
        1 tagacatgct tgtaacaaag gctagaataa atacacatgc aatggaaact attgctcttc
       61 ttaagatggg caaattccgt ttccaaacaa cagtgctgaa ggtgaggttt agggatgcac
      121 tcatctcagc agcttgtgtc tgcttatttt gggggaaagc catgagcttt cacagctgag
      181 aatatgtcac cgggatctca ctcagatgcc acacatgtgg gtgtcctagc aaaaggtttg
      241 tcaacaggat tcaaggtcaa tatatatcaa aaaatgaggc ctggctaatt tactttcatt
      301 catgctctca gagttacaca gcaaagaagg ggttaaccat aaagtatttc accttgaact
      361 ttgctctctc tttatctagc acaacataat aaaagatcaa gagttcctgc ttattatctt
      421 attttttcct ccttgttcca ccaggctagg gcccagacta gttatggatt aacactgtga
      481 tcaatagtaa gcttgctgtc tcactctcgg caggggaaaa tgaactcaaa atgcagtcaa
      541 actcttattg atcaaggata taggtctcac tttcattacc tctgtctcct gataacccac
      601 atataatgtg atgagttgct aatctctctg attttcaatg gacccttcac ccctcctgtc
      661 tgcacagtag agcttttatt tttgcctctt ctgtgtaatg ctcgtagtat taactctcac
      721 tctattacca tcagacctgg tcaatcagaa ctcataaaag gacttttaaa tagaattggg
      781 ccagctgtgt taaggttata tttgggtatc ttcaagcaag ggagtcacct tttaatagta
      841 aacagatggg gtaggtagag aagactgctt cacctacaga cctgataaag atgaagtcat
      901 ttgggctgct caaactcatc tcagaagatg tttatgtgga tgttagcatt aaaaatatat
      961 gcagcgccgt agtgcattta tagctttta
//
LOCUS       KCKM01001972             770 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31030apa ultra-conserved element locus
            uce-3122, sequence.
ACCESSION   KCKM01001972
VERSION     KCKM01001972.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 770)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 770)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..770
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31030apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>770
                     /note="ultra-conserved element locus uce-3122"
BASE COUNT          229 a          158 c          129 g          254 t
ORIGIN      
        1 ttttttcttt ttttactgta gcaaacacat gcaacatgca tgagctagtg gaactcatgg
       61 atcctgggag ctcatgaaac agagctgacc catctcaatg aactgctttt ctcttttgtg
      121 cttgtgtgta ctgcacatcc tttcggaact cagtcccaaa tcgtaatgat gtcccaaatc
      181 acaggattaa tgtatctatg aacagacctc ttatgcctct agaatgaagt actccttgct
      241 aatttctctt caagacacca gcttaattgc attttaaaca aatgggctgc tttgctggcc
      301 aacttttaaa tgagataaca gcaatgttca ctctccagca gtgatgagtg ccttgcagta
      361 gattcaaaac tctgttcaat aacaggttta atctcacacc agcagattta ctgcagaata
      421 aactgccact gagctcataa ttagtaaaac aaaaaaaccc aacctactaa atattatttt
      481 ccaaagcagc aggctatgtt ttagtggaaa ttttcagtcc tttcctttgt atgttttatt
      541 gattttatgt atgatattgg gaattcatgc tatgatttaa gataatggtc tttatcgatc
      601 acttaagcag ttgtttagct acatagtaac aaaatgatgc tcccattcac ggaatatgtg
      661 atactgacag cagggagacc acagtgcttc ccttcttaat gtttatttct tttttccaaa
      721 agcatattct ctgctggaaa acagcaactg caaacatttg tgctttagaa
//
LOCUS       KCKM01001973             673 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31045apa ultra-conserved element locus
            uce-3011, sequence.
ACCESSION   KCKM01001973
VERSION     KCKM01001973.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 673)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 673)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..673
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31045apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>673
                     /note="ultra-conserved element locus uce-3011"
BASE COUNT          214 a          128 c          122 g          209 t
ORIGIN      
        1 gagcgagtct caagcataag taaaaccatc ctgcaccgta tttcattttt caaatgggag
       61 catcaccttt tgaaaagcta gaatgtctca gtcatcagac gagctgtggt tgttaagggg
      121 tgcaggccct tatccagata ttttaaagta aatattttat ctagggaaaa gtatggaatt
      181 cataatttga tggcgcaaaa ggccaataat atgtgacagc atgatctcat tagaaaaagg
      241 aattttagcc cagtgtgatc tgagtgacta gttccgaaat gtgcagtgaa ttttatagtt
      301 cgtctggctg gcagagttcc atgctcctgc attccccaat ggtaaatatt tgtaacagat
      361 ttcacattgt aacacaaggg ctcctttcac agagcaggtc atgtaacgct gcaaaaaaat
      421 caaggccagg gcaaataaac aaaaagtcat gccaagttca ccactcccaa agattcctaa
      481 gcctggctgt gcatacaaac ttcacttgct actcatcaac atcagcaatt tatggccaga
      541 tggttataaa tttacattct ataaaatttt agaggatgtt attttttcca ctcagtttgt
      601 taattaagtt tcagtctttt tatttcctca aacataacag ttcaattttt tattaacgat
      661 acagtatcat att
//
LOCUS       KCKM01001974            1325 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31061apa ultra-conserved element locus
            uce-5522, sequence.
ACCESSION   KCKM01001974
VERSION     KCKM01001974.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1325)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1325)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1325
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31061apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1325
                     /note="ultra-conserved element locus uce-5522"
BASE COUNT          303 a          335 c          327 g          360 t
ORIGIN      
        1 gagggcccct tgcaggaact ctcattgctc tttcctgatc actctcctcc ctcatggagt
       61 ggagctaatg tgcattcctc aacaccatta attctgatct ctggaggtgt tgagtttccc
      121 ctgaaacgaa tgaaagggcc ttttgaaatt caagctatca ttgggttgaa atggaggatg
      181 gggacatgga aaggaaggga gaaaagattt tttgtcatgg aggaattgaa gtgtaatacg
      241 tctataaaag ccatgtcaag ctgctgccag tttggatgga ttcaacccac cattcacagt
      301 aaagttccca ggacaaggaa gtgctgtgac acgagacacg ctgacatatg gctgcattag
      361 cctggccaga ccctggaagc aattttctca tgagggaggg gaaccaggag ggtaatcctg
      421 gcttctgaga gacacacatc ttctgggggc cgctggcaag ccctgtggag ttgctatgac
      481 aagcatgtac cccagcaggc ctcctggaca gttgtggttc tccctcgcct ttgctttcct
      541 cccatcagtt gattgtgctc ttaacgtaag gttttttttg acagacattg ttggaactgc
      601 ccgtcctgac gagaaagcca tcatgaccta tgtttctagc ttctaccacg ccttctcagg
      661 agcccagaag gtatcacagg atcccaagct ccctccacag agcacacctg ctaatgtcca
      721 aacctttttt tctttctctc tctcctctct agctacgggc atctttatta ttatgttctt
      781 ggtagagttg gctgttggtt caaagtggtg ccccagacat agtaagtggg ggcaagggag
      841 ccaggagtcc catttcagtg gtcgcgatac tttctgtggc acttaggtat gccagcacct
      901 tggcacgcac acaaattcct gggagtgggg agctctgcct tctccatttg ccttctgaac
      961 cgctgccctg accgccaagg acctgcagcc cctagtcctg agagacagga gctaggatgc
     1021 ttggtctcac aaaggtggag accaccacat agatgctctg ctcagcaggt cactgctgcc
     1081 tgctcccact ggaaacagtg ttggtaccta ttcgcctttt ttctctctca aagatggaga
     1141 aacggagctg acttggtgct cttatgaagg gttcagtgga tacccagagc tttatctttt
     1201 acgttatgta tgctgcaggt tcccacaccc ttgcttcaag gtctgaacct gctgctttca
     1261 caagttgtgc cacaaatcca gtcgcagttc acctggggct gatgaagcat gtctaacgat
     1321 tatgt
//
LOCUS       KCKM01001975             658 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31076apa ultra-conserved element locus
            uce-7507, sequence.
ACCESSION   KCKM01001975
VERSION     KCKM01001975.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 658)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 658)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..658
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31076apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>658
                     /note="ultra-conserved element locus uce-7507"
BASE COUNT          229 a           97 c          115 g          217 t
ORIGIN      
        1 aataatattt ttgcaacata ttttgtagta acagttattc catacttaaa ttaaaatata
       61 tttgggatag gcattaattg agcacacagg caaaatgttc ttttttgtga attttgggtt
      121 atctatgcat tttaacattt aacttcactg aattcaaaat ccagaaaaga aaagcatgca
      181 taaaaatata cagggcatta cttatttata tgtaaaacct ttattctatt ttgttatttt
      241 agattaaatc ccgtttcaat tctattctct cagggaagca ctaacagttt gagctcagcg
      301 tgaaagccat caaacacttg agctgaaatt tagattgggc aattttgcct ggtgaagtag
      361 aaaaggacat gtggaatggc agagaacaga atggcttatg gaaaggcaga tgttttaata
      421 acttgctgtc tagtgggagc ctcaaatatc taaatttaaa cactgcaata tattaaaggg
      481 tgttgctgtc agggaggata tactccttta ccctacaaat cagtgtaaat gtgcacattt
      541 aacatgcaca cagactttat acaacattta tttaacaatt gaaattagaa ttaattggaa
      601 ggtgttcaaa gaaattatct cagattgcaa aatctggctc aggtctgcat tgcaaaat
//
LOCUS       KCKM01001976             908 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31091apa ultra-conserved element locus
            uce-6638, sequence.
ACCESSION   KCKM01001976
VERSION     KCKM01001976.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 908)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 908)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..908
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31091apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>908
                     /note="ultra-conserved element locus uce-6638"
BASE COUNT          240 a          201 c          186 g          281 t
ORIGIN      
        1 gatctcgctg tatgacatcg caaatctccc atctctgctt tgttggtcta tatgcatgaa
       61 taattttccc agtgcttgtt tgtagctaag tgggagaaag agagaattac cgccacacaa
      121 tctcttgttg tcggcgatca gcattccgat ggtctgagct ggcttacaac agtgtaaaga
      181 catcagtggc atgtgttata atatattgag cattgtactc ctgaagaacg cacgaaagaa
      241 agaacattgt tctactaggg agcaattcat cgggtttttc ccagagactc ttgggtcaag
      301 tttttatagg cctatttgat tttcaaattc tttttccccc tttttcctct cagtgagcca
      361 tagtgtccaa acttgtctac atttacttcc catgttttgt gcatggtaga tgtcctttaa
      421 aaagagtatc tcaaataagt ctttattctt gttttgttgg ctcttattct gtgttttcat
      481 gaactctggc cctggccatg gcaactgcaa gaaaaatgtt aacattgatt gacaggatta
      541 agaaagcctc catgcctatc cgcatttcaa acactttggg aacaatggtg tttggtgtga
      601 ttgaattaat gagatatcgc ggactgtcaa aagagcacac atactttaca taaacctgat
      661 tatctttgca tggcagaaat gaaaaaaagg agggaacaga ggtttggctt tcactcatac
      721 ctccaaagga gccatcaaag tgtgtgccct ggctcagaga gtgatgtgcc cgctcaactg
      781 gcctgccctc cctttctctc cacatactgc ctggctctgc ttagcataca tcagccatgg
      841 gctttaacaa gtctattcag gagactgggc cgaaaacaac actcttttca caactcagca
      901 cctctgtg
//
LOCUS       KCKM01001977             503 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31107apa ultra-conserved element locus
            uce-4980, sequence.
ACCESSION   KCKM01001977
VERSION     KCKM01001977.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 503)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 503)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31107apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>503
                     /note="ultra-conserved element locus uce-4980"
BASE COUNT          143 a           97 c          116 g          147 t
ORIGIN      
        1 gaaggaatgc tctccagtgg actgccgcct gtcactgctc cctgtcatgt gtccgataat
       61 taaaatctga ctgatttact gactggcatc aaccatcaca gctcaagagt tagaagatgt
      121 tcatccttcc caaggctaaa tttacttggt gaaaaggggc cgcttgcttc cagcctgagc
      181 tgtcattcag ctgccgtgga aaccataaag atagctaaca gagccccagc cagcagtctt
      241 tagtttattt tattctaata tttattgcca cccagaaaat gaacataata cagacaagtt
      301 agtgagagca ctgcactagt gatttgtgag gctggtgtgg agtgagagca aaacagtcct
      361 gcagtattaa aataaaatag aacagtggtg tttcccaaaa gtatggcagg gctgtagctg
      421 tgtttatttt aaccctaatg gggtgcaatt tattattaca ttttaagtag atgtactttt
      481 ggagaaggtt agttggtcgg gtt
//
LOCUS       KCKM01001978             816 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31123apa ultra-conserved element locus
            uce-1602, sequence.
ACCESSION   KCKM01001978
VERSION     KCKM01001978.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 816)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 816)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..816
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31123apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>816
                     /note="ultra-conserved element locus uce-1602"
BASE COUNT          259 a          159 c          144 g          254 t
ORIGIN      
        1 tctttcatgg actgcataat gcagggcctg ggaataaatt atagatgaaa cccccatcat
       61 atgtttataa atacactaac attagcattt tacttcctca taaatctgca ccaaacattc
      121 aggcgcaaga tagaaagccc tgtaaaacaa tgatatattc tctgcttgca agtcttgcct
      181 agtggcccat tcatttctac cgctgttctt caaacattac tttcttcgct catgccccct
      241 catttaaaat ccattttaat ttaaagatgt tcgatgcagt cctagtggta catttactca
      301 tcctggttat acatcatgga gcagggaaaa gaaaattgtt taatctagag atacggttca
      361 ctgtggtcac cactgaacag tggagtaatt accagatcag ctccgctaaa aatgcactca
      421 gggtgttctg tgacctatca tcttctaatc tgcatagtga agtatagctt cataactata
      481 aattgctgac ttaattaaaa ccaggacctt tctgtcattt aattacaggg agaaaggtta
      541 ttgcttaaat gcaattttcc aaatgtgatt tcttaacagt tattaactgc ttcaccatca
      601 tttattgttt cagatttttc aatttgaaaa tagtccctgt gacagaagta atgacttcat
      661 gaaaaactca atctagatgg agctgagcag acccatttgt ttctcgtaag tggagcagac
      721 agaaaacttg aaaatgtcac aggaggatcc tgtgattgct ccactttaca ggagtaatta
      781 aaaaccaaga ggttgtatta aaggtgaaga gaagag
//
LOCUS       KCKM01001979             876 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31139apa ultra-conserved element locus
            uce-7755, sequence.
ACCESSION   KCKM01001979
VERSION     KCKM01001979.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 876)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 876)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..876
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31139apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>876
                     /note="ultra-conserved element locus uce-7755"
BASE COUNT          227 a          205 c          188 g          256 t
ORIGIN      
        1 ttttttgaga agtaatctgt cttggtccaa aagtttaaga gtgtttttag tatctgcttc
       61 tgcctccacc tctatcggat ctgcttccac cacggccacc gcctctgggg gctccgcggc
      121 tcgaactact gtaagaatca cgaggaggtg gatagcccct ctccatggat gggggaagac
      181 ccctgtcttg tcttccgaca cgatcacggc cacttgagta gacatcactt ctgctgcttg
      241 agtaactttc tcggcttcca tatccatctc gtgtgctgcc gtaatcgtca tatcgactgc
      301 ttccaccata agatggcggg ggccctcgag caggtggagc actacgtgag ttacctgcag
      361 ggtcaatggt caggtaatat ggcaacacca taagttatat atcacaattt caatctgaat
      421 ttacagaatt gctgtattta aatgtttaca gctacgcttt tgcatgtatc aagatgctct
      481 taaaatactc tgccatgtta acggcatttt aaagtgagaa ctgcgtatca ggcagtgagt
      541 ggattttaag actctgaagg aatgaagacg gtgtttattc aggcaggctc tttactgggt
      601 ttccagaaca gcttgttatt ttagagaaga aacactcagc catattttcc agagacagtt
      661 gcaattctga actgtaggcc ttgcttcttt agcttacagc ttacttaaca agacgatcaa
      721 atgattacca actgcacttt cactgtaggg ggtgtgccac ttccccctaa aatatgagca
      781 acccagtaaa agtcagattt tgcaacacct gtacagacta ctacgtgacc ttcaaaatgg
      841 attcttaccg taactctcat acgaatctct gtagga
//
LOCUS       KCKM01001980             901 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31155apa ultra-conserved element locus
            uce-7012, sequence.
ACCESSION   KCKM01001980
VERSION     KCKM01001980.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 901)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 901)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..901
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31155apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>901
                     /note="ultra-conserved element locus uce-7012"
BASE COUNT          280 a          176 c          170 g          275 t
ORIGIN      
        1 attccctcta gaaatgaggg gaaacttgga actttgtggt aagaggctag tttgtccatg
       61 ttgcaatgaa tagagaatag tctgtacagt ttctcatatc tgactcacta cagaagagtg
      121 gaacatatag aaattaatgt tactgaatta tttaatagta actcaaacat atgaaaagaa
      181 gaaagaaaca caagactaaa aagccattta aaatgaaatc agaagcttca acaaatatat
      241 ttttcccttg cagtcaaaaa agtaattatc aaaattgttc agaatatgtt gccaatttct
      301 ctgttccata actgctaact ttctcagttc ttctcctgcc tttgctgggc tctctgtcac
      361 tggaaacatc ttaaaccaat ttaaagtgct acacctgaat aaacatgttg taaaagtgtt
      421 tatgtattga agtgggtcag ttcaaggtat ggtatttggc tggaacttct aatttctctt
      481 tttactgcaa aagggctgcc agaaggagga agtctgagct gaattaatac atttgttaca
      541 gtggaagtag aatggaaact actttaacca caaatcaaac tgcctctttc atttacgcca
      601 gtgatagagt ttttctaaga aatatagact ctggcataca gccactgtaa gtttgtgttt
      661 gaaaaggaaa cctatatgct tatttctata aggtttactc ctatgcatat ctgcaagctc
      721 tttttcggca tgattgtgtt cacaggatta aacatttgtg aggcagacgc tccttcctag
      781 cccatcatag caaaattttc agtgagttta gcaaaatccc cgcaggcccc aatgcggcgc
      841 agtgcgcgtg gtgcctgtgc ccccaccttc ccatttaaag gacctctgtg cccagcacag
      901 c
//
LOCUS       KCKM01001981             979 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31170apa ultra-conserved element locus
            uce-7145, sequence.
ACCESSION   KCKM01001981
VERSION     KCKM01001981.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 979)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 979)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..979
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31170apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>979
                     /note="ultra-conserved element locus uce-7145"
BASE COUNT          285 a          179 c          193 g          322 t
ORIGIN      
        1 gatttctgaa tgcaagtaac cctgatacca ggggcgtgca tgacaattac aaccagtata
       61 atacaaaatg ttaattacta aattttgaga aattaatgct gattagcagc tgcatgtgtg
      121 tgacctaaat acatctattg cttgatcttt attcgtaatg cacagtttat tgttgataaa
      181 gtaattgctg aatggtgggc tgccccgcaa gtctcgtagc taaagactga ggcctgattt
      241 gtaaatcgcc tgaaatttgt tggcatctgt tttttgctgg atttatacgg acagggaaga
      301 tgaataagct gtccccttta caactcaact catagatatt attgagaatt catattgctt
      361 ttaatatttg gtcacaaaaa tggacctaat gcttgttggc tttaaaacac ctactagcgc
      421 tgctttctct ctccatcttg caaaatataa gacaaggcca aagcttaaat taaaatcctc
      481 aggttcttat ctctttccca caggaaagca aatctgtgtt gaaaaccgta aaattaagag
      541 gagagcaagg atagcataat ttagcaaaaa ttcatggcac cagattctga gctatatgac
      601 tggagggata ggtcagacat taagaagata ctgcctgcta atgcaagttc cttaaggtgg
      661 tgctctggaa acaaggcaag cagagaatgc tgcactggtt cccatttgct ccctttcctc
      721 tagtcctact ggccttaaca ataaatggag ttgtccattt aataaccctt ctgcttccag
      781 aagtccagcg aaatcctggg tttgtacctg tttgtgctga gatttcaata gcgaactcga
      841 agaaaattaa tttcatttgg ctcttaattt tttttaaatt ccttgtcttt gatgagtttt
      901 atcagtgttt ctgtctgaag gacagctttt ttggcctatt ttattgaaaa cctgtttgtg
      961 cgggaattat ttttggtaa
//
LOCUS       KCKM01001982             771 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31185apa ultra-conserved element locus
            uce-2530, sequence.
ACCESSION   KCKM01001982
VERSION     KCKM01001982.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 771)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 771)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..771
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31185apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>771
                     /note="ultra-conserved element locus uce-2530"
BASE COUNT          260 a          178 c          116 g          217 t
ORIGIN      
        1 tttaaatgag aaggccagtc actgttttag tgtatgagaa acccactaga aaaatcgtac
       61 gtttagctta tgctatttca atataattta acaccactgc agccaccagg aaaggcagaa
      121 ttgtgtattt tcggagctcc cacgctctct cagtttagct tgagtgcatc atgaccaaca
      181 actgtgacat cttatgattc actatacatt ttatatgatg atccacacca atattaatta
      241 cgataggtaa taaggaaagc ccacatacct ctcccttcac ttttaaccac actcagaatc
      301 accttcagtg cttacatcca aaagcctttg ttcccctgca aatctccctt tacagcccaa
      361 taatccttcc ccgtactcta tagagttccc aaactcccag acgccatctg gccacgttga
      421 gttgtatgtc tacttaaagt ccaattgaca tgcaaactaa atgcaaacta caaacagaat
      481 ttaacagctc atcaccagtt ttaagacaca atccgtcaaa catttcagag gactatgaag
      541 aaaatatatc ctacactggc aaatcactgg acgtaacgtc tgacattcga taaacccttt
      601 aatagcctat aggcatttgc cgactacaaa atcttctgga aaataacttt aaagttttct
      661 ttaaccacga agaacgtaac atcccttagg tgaaagttat acaggtatga gattacgcaa
      721 gaaataaaat gaaaagttaa aataaagtga gtttgaatcc tatgatctgg t
//
LOCUS       KCKM01001983             430 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31200apa ultra-conserved element locus
            uce-5580, sequence.
ACCESSION   KCKM01001983
VERSION     KCKM01001983.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 430)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 430)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31200apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>430
                     /note="ultra-conserved element locus uce-5580"
BASE COUNT          136 a           96 c           83 g          115 t
ORIGIN      
        1 gaccctgaat gttgccctac accagctttt gactgtcaca ttacaggcta atcagcttat
       61 ctgaagttac agcaggtgag atactttaaa gttagctctg ctgctttaag tgattaagaa
      121 aaaaaaaggc aaactcccaa caatactaag ctgacctttc agtgaaatac gtgttattaa
      181 tgtatttaat gagatgcatt acacactgca cggagcactg tgtttcatta caggtctaaa
      241 atgcaatatc gttaaagacc tttaacagaa acaatggttg acattttgat atttcccata
      301 agcaaaatac atccaagagc atggagttta acgccgagcg cagaacagcg gagaggctaa
      361 tctttccgtt gtccggaacg ccgaaggaaa atctgctgtt agtcaccgct cagtgattcc
      421 ctccccaccc
//
LOCUS       KCKM01001984             586 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31215apa ultra-conserved element locus
            uce-5225, sequence.
ACCESSION   KCKM01001984
VERSION     KCKM01001984.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 586)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 586)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..586
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31215apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>586
                     /note="ultra-conserved element locus uce-5225"
BASE COUNT          171 a          105 c          116 g          194 t
ORIGIN      
        1 atgtgggcaa gaaagagaaa gagctgttca tcaaactcac tgcacagcac cttcatccac
       61 tgcagttggt tgggggaggc tttaggggga ggaggaggag cgggagaagt attagggctg
      121 tgagccacta ttcatttaca aactataatt aatttgatgt ttagattaat ttctgatgca
      181 ctctcaaagg tgcactgaaa gcatttttcc tttattataa tgttgattgc ttattgggga
      241 gataaatcta actgtcagtt atgcactgac ttaccaaaac tttcagacca agcaagcatg
      301 tatgcataag gaacagctgt ttgcagctct ctagttaaag ggacagccct gtcttttccc
      361 aataattcac attaaagaaa atctatacat tgtacgtagg gacttcttct ttcttttgta
      421 gcttaacaat ttattagaca tggatatgtt agcagaatat atgttctatt tgtctgtccg
      481 tccatttttc tatcactgat atattccttt ctccaagcaa gtgatagaca gagtccatgc
      541 agagtatttt tacattatga atatgtttct atacacttac tcacgt
//
LOCUS       KCKM01001985             725 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31231apa ultra-conserved element locus
            uce-4824, sequence.
ACCESSION   KCKM01001985
VERSION     KCKM01001985.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 725)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 725)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..725
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31231apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>725
                     /note="ultra-conserved element locus uce-4824"
BASE COUNT          254 a          127 c          140 g          204 t
ORIGIN      
        1 gtgaaaagaa tctgggcagt tttatataca ataaagaaat acaaatccaa agcgcggtgc
       61 tgggggagta gggaaaggaa aagaaaaagc ccacaccaca gatgctcaag tgttcattac
      121 ccaaatcttt gcaggaagca attgaataga attacctaca aagagaatgt ggcattttaa
      181 cattatacaa tcatgttcct catggcaggt gacatctatc tccttgacag agactgtatc
      241 tcaaaaatac attcaccaac ctgtctataa attcaaataa accctgcaat ttaattttca
      301 acatatccat atgtttgaga atcaagcttt cagcagttga gtacagtttg tgttgatact
      361 actgtaccta atgaataagg aggaaacaat gcagtgccag ggcagctata gccaggtttg
      421 gcagggggct gcaggggaga aaggattcgt cccagtgttc tgggtctaat tcaagatcca
      481 gtgaatagaa tttcccagaa gttcatcctt tcttgtttgg tcaaatacaa cgtctttcgt
      541 ggtttagagg aactatgtca ttacttagaa acacaaagaa ccaaatgtat cattgtgtac
      601 catggaaatg cagccaagaa gcttttaaga taaaataaaa cctttaattc tttaataaaa
      661 ataaaacagt agaatgcatg gtcatttaac ttcttaagta tatattttca gaatatctga
      721 tcagt
//
LOCUS       KCKM01001986             626 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31247apa ultra-conserved element locus
            uce-5852, sequence.
ACCESSION   KCKM01001986
VERSION     KCKM01001986.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 626)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 626)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..626
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31247apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>626
                     /note="ultra-conserved element locus uce-5852"
BASE COUNT          182 a          120 c          108 g          216 t
ORIGIN      
        1 atttattcag ttgtttctgt tgttccagga aaacgtaaat acattgtacc ctactatttt
       61 acgtttttaa aaggtgactt atacttccca tttcaaatgc ggtttcttta atgaaaatat
      121 tgtaatgtca gtccatgcaa agcaaatgca tattaatatg cgtttacatc tgtctcatat
      181 taatattcat gcctgaatcc acatccctac acaaagccaa ttttctgacc atctgtgtga
      241 tggctggtgg atgcaatgaa taaattttat ttgtgagggg agtgataaat catgtatctt
      301 cagtttttca cccacaatct ctcctcttag gtgctaaaat gttttcattg tggttaagaa
      361 ttttttaagt aaaccaaaac gattaacccc ttagcaggtc acatagcttc atttgccagg
      421 taaaagtcca caaaaaacat acaagttaca gtatgacata gaaagtggta ctgcagtttt
      481 cggagtttta atcttttctt ctttaattat ttctatctca gaaacacact cagtgtgatg
      541 gtgcaggcca aactcctcat acagatgctg aggagtacct tggtctgcta acagcctgac
      601 tgcttgcaac tggcttgtct ttggag
//
LOCUS       KCKM01001987             678 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31262apa ultra-conserved element locus
            uce-219, sequence.
ACCESSION   KCKM01001987
VERSION     KCKM01001987.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 678)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 678)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..678
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31262apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>678
                     /note="ultra-conserved element locus uce-219"
BASE COUNT          218 a          120 c          140 g          200 t
ORIGIN      
        1 gaattgtctt aagggcaaag caaataattt ccaaacacac agcatgaaat aaaaatgttg
       61 atagttattt ttttccctac gccattagag gaagtagagc tgttctcaag atgtattttc
      121 tttaaaaaat agtacatctg aaatgtacat gaactgactg aagatgtttt gaaaactaag
      181 taagcctgtc atgagcttgc caaggctacc aatgtaaagg caaacagctg tacagtggca
      241 gcagagaggc actgtgttgt gtttaaatac agtcaggcag aagccagtgg ataatgctca
      301 gtaatgggtt aatcaatact tattatggtt ttattggttc actaaagaga gaacagaacc
      361 tagtgagcac agagtcgaaa aatcactgca tctgatctag ataacatctt ctctccctta
      421 gggatttccc tattcaagaa tccaatttac catgcctgat tgacaaggat tggatcctag
      481 ggaatcacat aactcttttt aggacccaat aaaatcctaa tggatttgtc tgaccggtca
      541 ggagattcaa gttttactaa actgaggggc tttgttgcaa ttagcctgta ttctacttgc
      601 agttgaaaag ctattaggag tcattgcttt ctaaaatgct ggagccatgc tgggttctga
      661 ataccagata gagttacc
//
LOCUS       KCKM01001988             431 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31278apa ultra-conserved element locus
            uce-4760, sequence.
ACCESSION   KCKM01001988
VERSION     KCKM01001988.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 431)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 431)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31278apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>431
                     /note="ultra-conserved element locus uce-4760"
BASE COUNT          124 a           80 c           87 g          140 t
ORIGIN      
        1 attataaaac ttttagcaag aggctaatga aatgcaaagc tttctataag accagcactg
       61 gccttcctat caaatcatct gaaatattta tttgccctct tgaataattg ataggggcat
      121 cagctctccc ggtcaattga tttattaagg gactgtttgg aattaaacag cttaaagata
      181 ttagatttag cagcgacctt gcttgttagc atattcattt acctacggga gctcccatta
      241 gatattgtta atacatgacg ttcccagtca cggcctggat ctcctcaaat tgcattaaca
      301 ctgggctgtt tagccacaga ataacaggtt tgattgagtg cttgggcttg gtgtaattag
      361 attttcctag aaaaggggga actgttttaa tgctgtgtgc actaaactag atatgtcatc
      421 agcattgctg t
//
LOCUS       KCKM01001989             260 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31293apa ultra-conserved element locus
            uce-7962, sequence.
ACCESSION   KCKM01001989
VERSION     KCKM01001989.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 260)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 260)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31293apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>260
                     /note="ultra-conserved element locus uce-7962"
BASE COUNT           86 a           54 c           35 g           85 t
ORIGIN      
        1 aaacttctaa atctgacatt atagagtgtt gaaaggaaga atgtctgttt ttataaccta
       61 cctcagttat aataaatatt taaaatccac attaacatcc tcttatagtt acaatctgcc
      121 ctctatggaa cagtgtccaa cttagattta attagcaact gaacctttcc agccagagct
      181 tctagttagg ctgaagatcc aaatctccag tgaaatgcct ctgttttctt aaactacctg
      241 cactgtaata aatattagcc
//
LOCUS       KCKM01001990             517 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31309apa ultra-conserved element locus
            uce-3526, sequence.
ACCESSION   KCKM01001990
VERSION     KCKM01001990.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 517)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 517)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31309apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>517
                     /note="ultra-conserved element locus uce-3526"
BASE COUNT          153 a           95 c          104 g          165 t
ORIGIN      
        1 ttagccgggt tgtgaaatag ctcttcagaa agcaaaggtg taattcctga caactaatag
       61 cgtaaaagat catcccctta cccgatactc ttgaagatca acacagaatg tgactctccg
      121 ttagagaatt gttatttcaa gccctgcatg tgtttgaaaa gcaaagaaaa gaacctgtgc
      181 ttcataattc agaaaacaaa taattttatt ctgtttctga tcttcattta tagcaccagc
      241 aacaagtggt gcaggctgtg gaacgtgcca agcaagtgac catggcagaa ctgaacgcaa
      301 tcattggggt atgtggtctt tccatttaag ctctaatagt gtttgtaaat agcttttttt
      361 tttctttttc tcttttatga actcatgtcc atcaggtggg caatattagt ggacagaggt
      421 gaagtcaagt ggcttaatct ttactacctg aaaatttttg cttgcactgt gccgagaaga
      481 caaacagggt aatttatatc tgtgttgtat acattcc
//
LOCUS       KCKM01001991             992 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31324apa ultra-conserved element locus
            uce-7211, sequence.
ACCESSION   KCKM01001991
VERSION     KCKM01001991.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 992)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 992)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..992
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31324apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>992
                     /note="ultra-conserved element locus uce-7211"
BASE COUNT          211 a          250 c          261 g          270 t
ORIGIN      
        1 gttattcccg gagaacttgg gtccgtcggc agcaggagat gaggagccgc ggcgcgagcg
       61 tcccggcgag cccctgggaa tcgctgcggg gttgaaggcc cagatggccg cgggctgctc
      121 ttgattcatc ctcccccacg ccgagctggg agggatgggg ctgctcgccg actgttcctg
      181 ttcctggcta atattgtgat ctgctgttcc tgtttctcgt gtaagagtgg gaaacttttc
      241 tctctgtctt attaaatcta tttttcaagc tgtcacttaa ccaggtctag tgacagagtc
      301 ggatgtttat gtggccctgg acacttgaac tctggtgttt tcaatcacaa cagcaccttt
      361 tgccagccgt tgtgaattaa atactcctcg tgacctttta ccctcgccgc tcttaaattc
      421 atgctttaaa aacagcttaa tgaggggttt actggcccaa ttggaagttt ttattaaaac
      481 ctattagtgt gctagagtag cctgcctgaa ggaaacgatt agcccaaagc aactaaactc
      541 ggagctggcc cctagccaca ccaggttttc tctaaactgt ttccagaccc acgttaaccc
      601 taacactgca gcttgcatgg tattcatatc ctctgctata atttatagct tgtctgattc
      661 tctccccagc ctttctccgt gttcacgaaa gcattctgtt ttaatgtaat tagacctgca
      721 ctaaagggca gcgggccttc gtcggggcct gactcgttgg cgaacctcaa ttaagttgga
      781 agtgttcccc ccaagtcttc tgccctgggt aggagctgcc ctatggttgg agtgtggagc
      841 ctgcctggac aaagccgtga tggtcccagg gtgctggtta agcttcccaa gaggaggatc
      901 ccagcacggg gttggtgacc cctcggggtt agaaatgaag ccgcgttatc tggaagacac
      961 agcttggagt aaggagctgg agggtggaaa tc
//
LOCUS       KCKM01001992             291 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31340apa ultra-conserved element locus
            uce-3426, sequence.
ACCESSION   KCKM01001992
VERSION     KCKM01001992.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 291)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 291)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31340apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>291
                     /note="ultra-conserved element locus uce-3426"
BASE COUNT           75 a           47 c           76 g           93 t
ORIGIN      
        1 aataataata acctcctttc tggtgaatct gctcgggaac cttttacgtt attagcaggc
       61 aggcctgtgt cctttccttt gatgatggta acaagttcta tgacattgcc actttgagtt
      121 cttgcttcat tagattgggt gactgtttat ttgaaattgt aatgaaatat ttactttata
      181 gagctataag gattaagggc gataattgag agaggctgat ccggagcttt cagtgtaata
      241 gggcccccct tgtttgaata cagagcgcgg ggagaatgga ggggcgaggg a
//
LOCUS       KCKM01001993            1076 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31356apa ultra-conserved element locus
            uce-5265, sequence.
ACCESSION   KCKM01001993
VERSION     KCKM01001993.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1076)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1076)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1076
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31356apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1076
                     /note="ultra-conserved element locus uce-5265"
BASE COUNT          306 a          299 c          214 g          257 t
ORIGIN      
        1 gaatctcccc gtaagaataa aggatgagac ttctcccagc tgctcataga atagttcatc
       61 tccaccccgg ttgggtggtt tgtaacagac tcctaccatg atatctgcct tgttgatctt
      121 cacactgact ctaatccata aacactcaac cctatcatca ccatcattaa gctctagaca
      181 gtcaaacccc tccttaacat agagggctac gccactgcct ctccttcctt tcctaaccct
      241 tctgaagagt ttatagttac ccactgcagc gctccagttg tgtgagtcac cccatcatgt
      301 ctctgtgatg ccaactatca acaaatcaat ggtccagata catagtgagg agaaaatgaa
      361 gagtgcctgc tccctcccac cagctctgta cctcacaaag gaaggtgaag atgccctgat
      421 gttccttgag aagcttggca atggtgaggc tgctctgctt gatcccacct agtgggtcga
      481 agaggaggtc acggttgagg gtccccttcc tctcctccgt ccacacgtcg atctcttcct
      541 ggtggtacgc gaaggtgcag ttatccccgt acttacagtc ctgcttgtta agcatatcta
      601 caaagcaaca aacagcacac accaccacac agggagggcg gcccagtcag aaactaaact
      661 ctctctcgtc tcctcccact gcccacacct cacaagctgc tgaaaacaag aaaatacaga
      721 agtaaagaaa aaagagaagg catctcctcc caagtttgtc tataccaagt cagtcaggaa
      781 agctaatgca aactactgaa cggtgacaat ctcaagtaat gttatcggtt gtagaaacac
      841 tctcaaaatg gaggcctcct ttaactcagg gacagaccat gattaaccaa cccattttaa
      901 atccaatcca gattaagttc tcctagtggc ccagaactaa ggagccgtat taccctagct
      961 gttgcaatct ctccacctca ttaagcacat tataatgaca ctgcctcagg taccagtctg
     1021 gatagattgc ctgcatgtat agagggatgg gctggagcaa aagagcaggc acagag
//
LOCUS       KCKM01001994             578 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31371apa ultra-conserved element locus
            uce-6239, sequence.
ACCESSION   KCKM01001994
VERSION     KCKM01001994.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 578)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 578)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31371apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>578
                     /note="ultra-conserved element locus uce-6239"
BASE COUNT          217 a           70 c          163 g          128 t
ORIGIN      
        1 gaagtaataa taaaaccaga cctaatgggt caccatatgt ggagaggagt tctcctgggt
       61 cttaggatat acacttaaag agtgaaataa agaaaaggaa aaaagcagta atattggcaa
      121 ctgttgttag gtagtataaa caatagccag ccattggctt ggagcagagg atcaagttcc
      181 aatagcactc aatagggagc cttccttaaa aaattagaag aagctgggct ggagctggtc
      241 catgctggga atggcagaag aagcaaaaac aagagtaaat gaatggaaat taagcagcag
      301 gaaatgggga tttggcacaa ggctggaatt tgaaactgca gagaggtgtc agtgataaag
      361 gttggataga gtttctggcc aaaaacagaa agaaagaatg cagatgtgtt cattgaataa
      421 agtacagatg tagaaagtgg aagggagggg gctggcaggg ggagagagga ataaagaaaa
      481 gaaaaaaaca tgaggggaaa taatgctgaa agtaggtgca ttcacgttta atgttttctt
      541 gaaacaattt ttctctgggt ctgtagagaa tgacagtt
//
LOCUS       KCKM01001995             448 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31387apa ultra-conserved element locus
            uce-1932, sequence.
ACCESSION   KCKM01001995
VERSION     KCKM01001995.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 448)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 448)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31387apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>448
                     /note="ultra-conserved element locus uce-1932"
BASE COUNT          143 a           77 c           89 g          139 t
ORIGIN      
        1 agggtatccg gttgaacgtg tacacgtggc tgggaattgc aatctattaa tactggagta
       61 cggtggaacg catgtctact tcttattgta ggcagaactc aatatatctt gcttcctact
      121 tacaaaaaga tgtttattac ctgtaactgt acagaggtgt gtgcttcaca gcagcagtga
      181 ttggtaataa gcctcctttt ctcatttaca ttgatagcaa gcattagtga agatatatgc
      241 atttcatttc atggttcaga aagaacaaag tatatgtata tgtgatagca gtgggtggtt
      301 aatgaaatgg tctgacaaac ataagctaat acataatcat accagaatgt ggactggaac
      361 acctgttcct gcttcacagg cttacaattc ttaaagaaaa gttactattc tcaagaactg
      421 aaatcactac tatttagaca tcaatatg
//
LOCUS       KCKM01001996             525 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31402apa ultra-conserved element locus
            uce-746, sequence.
ACCESSION   KCKM01001996
VERSION     KCKM01001996.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 525)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 525)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31402apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>525
                     /note="ultra-conserved element locus uce-746"
BASE COUNT          181 a           82 c           91 g          171 t
ORIGIN      
        1 tatccaaatg gtatggatct gcttgagtgc cacgttagat caaaataaaa atggtttaaa
       61 ataggtaatg aattttctga agaagatgtg actagttttc atcttgttga gcattttttc
      121 actagtgcaa ctttggaatt tttatgagaa ttttggtacg ttaatgacca cctcgctccg
      181 tgctggaagc aataaacaca aagcttttaa agactttctg acttgactaa ttgaggtcgc
      241 tttcgtcaga ggcagaggat gtgtaaccct taaaacggtc ttcatttgca aaggtaaata
      301 aatcaaataa gattttaatc tcacttaatt tatcttaata taaccaataa aaacagggag
      361 gagaaagttt cattttagaa tgtaggaaag actttgagga cacctaaaat ctcattttaa
      421 aacgttcaat ttgtatcggt aatctaaaaa gccttagctt agctagttaa atttggacaa
      481 actattccct attaaacaac tgtaaaacct cataaccagt agttt
//
LOCUS       KCKM01001997             641 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31418apa ultra-conserved element locus
            uce-3452, sequence.
ACCESSION   KCKM01001997
VERSION     KCKM01001997.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 641)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 641)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..641
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31418apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>641
                     /note="ultra-conserved element locus uce-3452"
BASE COUNT          216 a          108 c          100 g          217 t
ORIGIN      
        1 tattccggac ccaccagagt ttgtatacgc tagtagatac aggaaaaaac aaagcacttc
       61 atatgggaca agccaaggaa aaagagtcga gaccctagtt tctttttaat gtaagaactt
      121 aaaattcaaa gccatttctg catcttgagt tagtataaaa catatttaaa aattcataca
      181 gttcaaattt ctttgcctta cacaggccat aagccactgg tgtggtgggt cagttctgac
      241 actgaaaaat gaatccagtt agagaacctc ctgaaggctg ttgatgatcg ctataataaa
      301 tagtgcacac tttaagtcaa actttttcat tctgtgttca aaggtaatgg atttttcgta
      361 accatagtaa ccttagtgta tttctggata aatacatgag gtatatacat tctagtttta
      421 tttttgaata taaactacca cattatgtat tactaataat atgaaaaata gaatataggt
      481 tagcataatg acagctcaaa ccagtgtgca tttttcttct gcaaaaaaat aaatatttat
      541 caaaagtata ggttcaatta atttctcccc tcagttttct ggtattcttg tagtgcaatt
      601 tatctttttt gcaagatctc cattaatctc ttattgccat a
//
LOCUS       KCKM01001998             781 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31434apa ultra-conserved element locus
            uce-972, sequence.
ACCESSION   KCKM01001998
VERSION     KCKM01001998.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 781)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 781)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..781
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31434apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>781
                     /note="ultra-conserved element locus uce-972"
BASE COUNT          218 a          138 c          163 g          262 t
ORIGIN      
        1 catacactta aaatacacac aacaagttac agatgtctgg tatagtgaca gcgaagtctg
       61 ctctgttaat aacaatactg aatatgtaaa ttcccccact ttttagaacc ggcactttag
      121 gttgcattta ctgtaaacaa agatgtattt ttgggggcag ttggtttggg tttattgttt
      181 atgtaaatct ctcagaatgt gacatagcca gatagcttcc tatgttgtgc tgatccacat
      241 tttaggccag cagccaaagt attttatctt ttacttcatt atagtgatct tccaattagc
      301 tgtggtctgt aataccctga ttttggtggc agtggtttgg ggaggattgt ttgatagttc
      361 tgctcgagag gcaaaatgag gggccttatt atagaaagtg cagaggttgt gcagtagctg
      421 agttctgttg caaagtttgc cgataaggga aaactggccc ttgagcatcc attctattct
      481 gtatattaac acttctaatc tgcactgctg ataaaactgc aagccatttg cctttggagg
      541 aattagttct gcctcacttg tgtaaccagg cgatggtgat taacctttaa actgtccaat
      601 attctcagca gactcctgct ccagattaga aactatttag ttatgaccaa ctaaattaac
      661 aacatttcct cctctgaaga ataagatttg gaaggtatgc attttaaggt ggaatgtgga
      721 taatgtcctt atttactcac catttttgct gcgtaaaatg tgtttgtcgt ttaagaagaa
      781 a
//
LOCUS       KCKM01001999             484 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31448apa ultra-conserved element locus
            uce-610, sequence.
ACCESSION   KCKM01001999
VERSION     KCKM01001999.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 484)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 484)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31448apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>484
                     /note="ultra-conserved element locus uce-610"
BASE COUNT          145 a           96 c           72 g          171 t
ORIGIN      
        1 tgctatgact catttcagta aagcaaggta tttctgcact gagatgtcct ttgtagtaaa
       61 cttttggacc atttcacagt ttcacacagg gcacctatga aaataaatca ctctttcata
      121 cgatactttg tgcctttctc tagttacact tctcaccagc ccccacagcc ccccttcccc
      181 ctgccaaatt caggggaatt ccagaacatt ttgcaattag ctaaggatta tatttcctta
      241 tttttattaa ttttatgtaa agtgggattt atcagtggag cattcattga cactgacttc
      301 aatttattct gatgaaagtg actgacatct gtgtgtgctg ttcatcagtc ataatttaaa
      361 ccattcttaa ttgcattaaa tgtaaattaa gacattcaat ttcagccatt atttttcata
      421 aaacactgtg aactgaattt tagtgggtca taagatctta cattcaaaat aaatagggta
      481 aatt
//
LOCUS       KCKM01002000             434 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31464apa ultra-conserved element locus
            uce-5269, sequence.
ACCESSION   KCKM01002000
VERSION     KCKM01002000.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 434)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 434)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31464apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>434
                     /note="ultra-conserved element locus uce-5269"
BASE COUNT          115 a          107 c           83 g          129 t
ORIGIN      
        1 taattggatg gtgtattcat gccgaagctg ctcttctgaa agtgcctgcg tacgcggctc
       61 cagcattaac cacctcctga aagagactct ccgaagagct cggttttcta ttattacttg
      121 ctagctgagg ggttttgtgt agataatcat gttatttaga taggatgttg gtttaattcc
      181 cttcattaca ggctcccagg gttgtaattt tttttctccg cgtgatgtat tccccgtggc
      241 acatttcact caaatcaaac actttacgct tttattacaa acaatacccc agcgtccccc
      301 gttatcagcc cggcgcacac acgcacgctc ctcgcggaga tccagaggtc agttctaatg
      361 actaatcgat ctcattagct ttcctaatta aaaactttac taccgcaatg gaagacaaac
      421 tacaaaaagg aaaa
//
LOCUS       KCKM01002001             861 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31479apa ultra-conserved element locus
            uce-6618, sequence.
ACCESSION   KCKM01002001
VERSION     KCKM01002001.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 861)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 861)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..861
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31479apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>861
                     /note="ultra-conserved element locus uce-6618"
BASE COUNT          277 a          180 c          168 g          236 t
ORIGIN      
        1 ttcttagtta gcccacacct ggcttctctg aacttcacaa atttgtagat tgttcgagaa
       61 atcctcacaa gaaatcaaac tgtggtctag tgtcactaac tcaagatatc aattggaatt
      121 ttcagctaaa attaataatt tagaacatta aatgcatgaa aagaggcaca ttagggtgga
      181 aactacagaa ctgaagaagt tactgatact tcagctctac attgaatcta cctacaaaga
      241 caaactcact attatagcta caatatctac tccgctaact aatacaaagg gtccatttgc
      301 ttgcaatagt ttaaatcctc ccaaagcaac tcaggaactg cagaaagcct gacctgcgag
      361 gcaagggtga tgcttggctg agactgcagg aggttggctt ggctttgctg aggtagttgc
      421 gttaagagat tctgcgcttg caggagacct ggagagagaa aagggtgggt ttggtttgtc
      481 actaagaaga ctaaaacatg aactgaggta aaacaagact cttgccaaat actgacagtt
      541 acaaattgag atgcaagcct tcacttcatc cctgcatagg tatcttctac ttttggactt
      601 ctaagtccaa aatccccttg catattccca gagtatatac ggtgacagaa ggctgcaaga
      661 gagaagtctc tactaatccc ctttgcagaa ggaatttgta atgatctaca ttatttcagt
      721 tctgcgtgca ggaatcattc attctccctt tcagcttggg gttaaacctc ttcctatacc
      781 caacagctga ccatgaatta gggatccatc tgaaaataaa caattgaaca ataaccagat
      841 caaactgaac aactgtatgc t
//
LOCUS       KCKM01002002             759 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31494apa ultra-conserved element locus
            uce-3652, sequence.
ACCESSION   KCKM01002002
VERSION     KCKM01002002.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 759)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 759)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..759
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31494apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>759
                     /note="ultra-conserved element locus uce-3652"
BASE COUNT          189 a          159 c          144 g          267 t
ORIGIN      
        1 cttgtgctta tctgtaggga cagttttact ccttcccaga gtcacacaca cagctagcag
       61 caggcttggt agtactttgc tctgtgcatt atctcatttt tcttcttagt tgcctttcct
      121 cccattgtta tgtttctttt tttaatcttc ttcatttttc ctttttttcc cctctccttc
      181 tcttcttttt tttctcctcc tggctggttc ttgctttcca ttccttcatt cattctttcc
      241 tctcttctct catttatttg tttagagcaa attttcaaaa ctataaaccc attatagcaa
      301 agagactgtg ttgaagcagc ctctgagcct gcagatgtgg tgggccctgg attccaataa
      361 cagaacttat ttggaaaaaa acattatctg taatgtggaa atggtttggc ttgagggtaa
      421 aatttatcat cattacccta atatcatctc aagcctcagc tctggcagca gctaaagaaa
      481 acaccaaggc ttaattcagt cagtgcaagg aaagagagac agaggatgga aaatatgatt
      541 tatgatggaa atcaatgcaa tcataatact ttatgcttgt aaaattgggc tgtttcaaca
      601 gtgctcacgg attgcatagg cagatttcca ccaaaaaaat catggcaaga tagaatgcag
      661 tagtttgatg gtgcagctgg cacaaaggga ctgtatccag ggtttggggt gtgaatggaa
      721 caggctttgt ttttctggga gtttccttcc ttccttcct
//
LOCUS       KCKM01002003            1074 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31510apa ultra-conserved element locus
            uce-5410, sequence.
ACCESSION   KCKM01002003
VERSION     KCKM01002003.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1074)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1074)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1074
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31510apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1074
                     /note="ultra-conserved element locus uce-5410"
BASE COUNT          336 a          219 c          194 g          325 t
ORIGIN      
        1 aaaaagcagt aaacctaaat ttacaaaaat caaaatagac ttagacactt taatgtccag
       61 gaaaccgatt ttactattta actacagact acacagagca tgcagaaaaa aaagagagaa
      121 gcattttttc ccgcttctca aacaaggtaa aggtcttatt cagcactcaa attttcctga
      181 ttattacgtg aagccaagat gacccttttg tccttttttt tttttccttt ttaagatgaa
      241 ttgccatcgc ttcagcgcta cgttttgtca gtttgggtac agcagagtca ataccttcac
      301 cttgacacgg aaacttcgtg atttatcagt tgtgccgtga ctcagtgcta ccacgacctg
      361 gcgaggcgca gccactcatg gcactgggag cagactttgg tcacagctac ttggaaaaaa
      421 ataaagcact ctctgatgat agacaaatgt gtcttgttag caacagccaa aaagcgcttg
      481 acttgtacta ataacaaaaa ggccatgttg gtcaccatgg gtctaaagac gaagcaccct
      541 gtcactgcct tggttgggaa attagcaaat aatgttcctt ttccttgata aatgggtgac
      601 agttctctct caccaatcat tttttaacat tttgatgcat gtctatgatc ccgctggagg
      661 aacagaaaag tttactggcc ctcaattttc agatgatgaa tggaacactc taaatgtgcg
      721 atttctgtat gaggtatagt tcattttaag caattctagt aaatgggtgt cactgattag
      781 gacaaatagt ctacttgtgc aatagcacaa atggtatgtc tcattcttct ggcctccttt
      841 gagacagaaa agaaagggga caacaatgac cctgataaac ctggaattgc tactgtttaa
      901 aaaagagcta ttatataata tacattatcc aacacgctat tgacttcacg ctactaaatc
      961 acttctgtgt gtttagcatt gccctattaa ttaaaaatgt atgtcatgcc gaaaaccctt
     1021 ctttataaga aaagacagtt aaccagaatc tttttccctt tgacattact gtct
//
LOCUS       KCKM01002004             935 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31526apa ultra-conserved element locus
            uce-6228, sequence.
ACCESSION   KCKM01002004
VERSION     KCKM01002004.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 935)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 935)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..935
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31526apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>935
                     /note="ultra-conserved element locus uce-6228"
BASE COUNT          204 a          285 c          211 g          235 t
ORIGIN      
        1 aacgtggcag gagcttcaaa cccggcacta cctccctgcc ataggcacgg gcgtgtcgag
       61 cagcagacat cacctccagc ttcacttttt gattaatgtt cttccaaact ttccttggct
      121 ccccgcgctc ccactttctg tcacccttct cattacagat gtatctttgc atcgaggaaa
      181 gcgggaggaa aaattgttct ttcagggtga cagctgagcg agggctatat tattaaaggt
      241 accaatcata ggtgccgagc tatcatcgca cgatgaatgc acttgtcagg agcccacggc
      301 ggccggggga gagagggagg gagggagcgg gacggcggca ctcgcttccc cgctcctctc
      361 ctcccacccc ccgctctccc tctcctttaa tgttggccac ctccacttgc ctgaacttgg
      421 accttcagcg gcgacaattt ctctggcctc gacagcacga ttaatttctc ctgccctcgg
      481 cggggcctcc gagtgcggtg gaagtccagc tggcctgctg ctgataagat gtaccttttg
      541 atttgttttg tctttgattg ccttttctgt cacctacaat ggctggccgc ctggagacct
      601 ccacatcgcc tgactgacgg atctatttat ctataggctg ctccccggct tctcctcccc
      661 ctcgttcccc tcctccccca aaccaccacc ttgtaccact gaagtcccag tctaatagaa
      721 gccgtgaagg ctcatccacc ataaaataca tctgccatcc tccttctctc caagataaaa
      781 gcctgtcagt gttactttcc aattccaggc agcttgatta atggtgaaaa gccactgcga
      841 gatcgacttc tggtttttac aagcgctgtc agccggccca gggttatgcg aaacacactc
      901 tcatagaaaa caaaacaaaa tgagaaaagg ttggg
//
LOCUS       KCKM01002005             907 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31542apa ultra-conserved element locus
            uce-4882, sequence.
ACCESSION   KCKM01002005
VERSION     KCKM01002005.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 907)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 907)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..907
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31542apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>907
                     /note="ultra-conserved element locus uce-4882"
BASE COUNT          255 a          204 c          184 g          264 t
ORIGIN      
        1 acaaaaggtg catttctgtt atttctggcc tctgccacgt aggatcaaca ggaatctgag
       61 ggggtccgcg cctgcgactg gcaatgacct gcccacctgg gctcctgagt ggttacagtg
      121 gggccaagtg tatttcagta tcatgactga cattttgaaa ctgagttcaa gcaacaggga
      181 gcgttggcct gacaatatca gctcagtggc taatcgcttg acgtatttgt catcattgta
      241 acaaacttgt gttgaaacac agtctgctac acttatcata tttacagatt taaaatatga
      301 cctttataag tgaaataaaa gagtcctttt ttccccccta tgtctcctcc ctctgtgttt
      361 ttaataaaaa ccacgaacca acacatgtat ccatccttcc ttctgtgata gttagggatt
      421 ccactctcaa atactataca gataaaatga atcttcatgt gttagcgatt cgcaatgcag
      481 taaattctcc tttccaaacc tgccgtcttc attaaaatct tatttgcttg gtaatctcct
      541 ttgatcgcta aagttataag aagccccctc ctcttctttt gatactatca gtgtagcttt
      601 tgaccagaga gcgtgatgaa ttaaatgtat gacagatatg acaggtgagg agtgcttgga
      661 gagggcttaa acagcaggga taagacaaag cccccattta agaacaaaac ccctacccga
      721 tggctagccc gttaatgacc aaccactcta tttgtcctgg tggatgagga gcaagctgat
      781 actacagaca aagctttgtt agccaccggg ctgttcttca atcaggccac aaaaccaact
      841 aattgaaatg cccagttttt ccgtcaggat ttgatataca agctgggagg gttgtaggta
      901 aactctt
//
LOCUS       KCKM01002006             817 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31558apa ultra-conserved element locus
            uce-6272, sequence.
ACCESSION   KCKM01002006
VERSION     KCKM01002006.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 817)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 817)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..817
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31558apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>817
                     /note="ultra-conserved element locus uce-6272"
BASE COUNT          268 a          177 c          122 g          250 t
ORIGIN      
        1 taaatggcag caaacaggaa atgtttaaac tgtgtcaaag cctttgatga atctttacaa
       61 ctgctcataa aagatcatcc tgcttaaaat aatattgatt tttcatttat tttcctagat
      121 actagaagat ttacgtttca tctgatcagg atcaaagctt ctccctcctc ctgatcacta
      181 ggattaaatc agcaatgtca ttttacacat ttaaaaacta cactgctcaa gcaagatata
      241 aaagtgcaac gaggctgatc atagagacct tagaataaaa acccctcaag attccccgtc
      301 tctctcgctc tctctccctc tccctttgct gcagagcagc tgtgcctcac acagattcac
      361 atgaatgaaa atattaaggc gagaaaccac ccacttagtt tattttccat atgactttcc
      421 tgtaattatt ttgtaaactg ttcacacaac aatatataaa aacatctgca aaaacaggta
      481 attaatgtgt caagccaaac taatgcattt tttatagtgt ccatgcttcg tcaactgtaa
      541 ttataactct ttttaagcaa atgatgatgt gtttgttgca atgtgcaagt ggttatttta
      601 gatgctctgt ttactattac tgcaaaccga atataaaaac tctacagcta ctttgttgca
      661 catataagcc ttcatccaca caagcacaag caggctgctc cctcattttc caaaggcttt
      721 gcctatttta aagaaataaa aatatcttaa aatgaaaatt ggctttggag aggctgacca
      781 ggccacccgc tgaccaaagt aacagtagcc aggacat
//
LOCUS       KCKM01002007            1019 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31574apa ultra-conserved element locus
            uce-6245, sequence.
ACCESSION   KCKM01002007
VERSION     KCKM01002007.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1019)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1019)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1019
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31574apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1019
                     /note="ultra-conserved element locus uce-6245"
BASE COUNT          290 a          211 c          215 g          303 t
ORIGIN      
        1 ttagtagagt tctaccacat gaaataaatt gcactgcaca tacagtaact gataatggct
       61 ctttctcttc tctttctagg tgatgtcatt gtctatatta atgaagtttg tgtccttgga
      121 catactcacg cagatgtagt caaactcttc cagtctgttc ctattggtca gagtgtcaac
      181 ttggtgctat gtcgtggata ccctttgccc tttgatcctg aagatcctgc caacagcatg
      241 gtgccacccc ttgcagtaat ggagaggcct ccggtagtgg taaatggaag acataactat
      301 gaaacttatt tggaatacat ttctaggact tctcagtctg ttccagacgt aacagatcga
      361 ccaccacact ccttgcactc cattccagca gatagtcagc ttgatagcac attcccacca
      421 cctgcccatg atgataatgt atcaatggct tcttctgggg ccacccaagc tgaactcatg
      481 accttaacca ttgtgaaagg ggcccagggc tttggcttca ctatagcaga cagtcctaca
      541 ggacagaggg tgaagcaaat tctagacatt cagggatgtc ctggtttgtg tgaaggtgac
      601 ctcattgttg agatcaacca gcagaatgta cagaacctga gccatgcaga agtagtggat
      661 atacttaaag aatgtcctgt tggaagtgaa acttctttga ttatccatag aggaggtaag
      721 tttggaaagt ctgtgcaatt acaaaaatgt gtataaaagg ttctaaacca taagacatac
      781 atatactcac tacatccttg tgtgctagat tgaaaattgt gggaggtaac accatcggtg
      841 gaaaagtgtg tctgcaatta agtatcctag gcaaaatcta acattgttgt acattccttt
      901 ttgtgttttg agtgtcaatg gttccacctc tgtacaaggg taaaactaga ccagttctag
      961 acatttcacc tcataatagt ttgtatggtg tctgcacaag cttgagatat aattatata
//
LOCUS       KCKM01002008             978 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31590apa ultra-conserved element locus
            uce-27, sequence.
ACCESSION   KCKM01002008
VERSION     KCKM01002008.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 978)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 978)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..978
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31590apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>978
                     /note="ultra-conserved element locus uce-27"
BASE COUNT          335 a          167 c          177 g          299 t
ORIGIN      
        1 acaaccaact tgtaatgtac tcagttgata tcaaaacaaa cagaggttgg aggatcgcag
       61 agttctaaga ataaatcttt tatttctcag tcttcctctt tagaaaatca ttttcttagc
      121 attgttttca taaaagcttt caaatgccct aaaataatgc agagaaattg gcttttattt
      181 tgaacaggat ttctcaatat gtaccgcatc tcttggcata tctattatat taactcaagc
      241 cttaatgata caatgcttaa aaacagagta cagatgtgta taaatgaaaa atgtaataga
      301 tttccctctt aatgtaatag aattggcacg aggtattgga aacaggagtg aaagtactca
      361 ctcaagcatt gtgtttgcat gttatttaaa tacaagtggt tgaggtataa gtacctctaa
      421 gtacacctga aagagatggt gccttgtaat cattgtttca gcaattgaca gttgtttaca
      481 caacagcagc acattctcta ctgatttgaa taataaacat gtttaaacac cagctggata
      541 atagaaggat aattgaaaca tagtttaaag ctctgattta caggcattgt ggcaacactt
      601 ttatttgtgg tacaacacta tacttctgtg ctgcctcttg aaaaaattaa acaggcattg
      661 tttcaaacaa ctttgggata tatttaactc gattaatcta tcatgtattt gtgtacctag
      721 acagacaggc agaaaaaaca caccatcaaa acttcataaa ggcttatgct ggtgaccaca
      781 cgctacttgt gctgcttagt tttgttatac ataggttggg cccttactac atgcacatac
      841 ttcccaagtg tgaactgtag agctcacaaa gtttataaag ctctataaag tacaggcttt
      901 ataaaggaag accacagaag gctgcacagt aagattgctg agtaaatcag aggcaaaaca
      961 gagaagttga ggagcagt
//
LOCUS       KCKM01002009             993 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31605apa ultra-conserved element locus
            uce-2310, sequence.
ACCESSION   KCKM01002009
VERSION     KCKM01002009.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 993)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 993)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..993
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31605apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>993
                     /note="ultra-conserved element locus uce-2310"
BASE COUNT          260 a          199 c          189 g          345 t
ORIGIN      
        1 gatgaagcaa tactctcact cctctccata gatccaccag cctcatgaat cacacatgct
       61 gctttaattc cttgtgcttg gtccttgtat ctcctgcaaa attctcactt gaggaactgt
      121 tcagccctga ggttgcaaat ctgttagtcc agtgtctgca aataatattt tttcttttat
      181 caaagtttaa aagtctgtat ttagagactg acacttgcta ggtgcctttc ataaagcatt
      241 tttgtaatta ctcttacatt taaaatgtta cacgcatgca aaatgtacat taaaatgctt
      301 tcaaagttag tgaactgatg tgctacccag acaggagcac gtaaccatac gtgtgtgtat
      361 acacccacat atcgatgtaa tagcttctcc aaatgttaga gttttttctc agaagacctc
      421 tccagaaatg ctgtgctcta gggttctgct cctatgtttt tttcatgaga acaaagatta
      481 gtccttcatg gtcctaaact caatgcatgt gcatgactta aaggcattac ctaccaataa
      541 ataggagatt agctgcggct tgtgtatttc ctgatcagtt caggtttttt cagatggctc
      601 gttgttatcc cgtttccttt aacgatggga cactttaatg agtttgccat ctgacataca
      661 tctgcttcct gttaaacaat accttcattc ttctggagct gctaaactca tcttttatcc
      721 tacaagattt gtatctgcac cttgaaaata gcatggacaa attggtcggc gtgttcattt
      781 tcttgttgag gtttttcggg ggtcgttttc gagaaagaat ggctaaagaa gcgtctcctt
      841 taggacttgt ttgttggaga atgggaggac ttgggtatga tttgcctaat taagggcggg
      901 tcagtccagc tcttgtttga agtttagcaa gataaacttc tgtggattac attatattat
      961 tatttctaat aattattctg tcctcccagc gaa
//
LOCUS       KCKM01002010            1076 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31621apa ultra-conserved element locus
            uce-5634, sequence.
ACCESSION   KCKM01002010
VERSION     KCKM01002010.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1076)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1076)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1076
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31621apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1076
                     /note="ultra-conserved element locus uce-5634"
BASE COUNT          238 a          223 c          261 g          354 t
ORIGIN      
        1 aatggagttg gtggcattgc attgagatgt aaaacgttcg gtaattttct cctggcatag
       61 gcactgctgg cgcatgtgcc cgacgctgct gtttcttacg ggacagatgg gcagccgggc
      121 ttttgtgtca acatagaatg tgctcccttg gttcttgcca tgttccttgg aacccctttt
      181 tcttttatct catctcctgt gtggcttggc tgtttctctg gggtgcagct ggtgctcact
      241 aaagtgtggt taagccagag gtttcacttt ctcaacgaga gctgctgatt gactggcctt
      301 cacgtcagga aacatgagca ggtgcggagt cagggttccc atttatttca aaggtcagga
      361 caaatccttt ccctgtcctt tacctttaga ttagagagac ttttatttct ttggagaaaa
      421 atgggcaaat aggatttaga gtattattag aatcattata tcactgtcgt tggtcctggg
      481 gttgccaggc cttttctgat tatcagatgc aacaaatgac gtccaatttt attgaccagt
      541 ttggcttcaa cgatgagaag tttgctgatc aagatgacat cggcaagtga gtataacgtt
      601 acgctggctt tgactgtagt ctcagggggt tcctcttacc tggctgtggt tttgctgatg
      661 ataattacaa gccttccctg atgtgaggca cttgccaatc actcctgtct tcttatatat
      721 caactgtgtg cgttgataga agccctcctg agcagtttac cgaggaggac aacagctctg
      781 tctttcaatt ctgatgtcct ggttgtgcca acaggagaac acagtgcttg ggaataactc
      841 agttatagtg ctgcttttga aagccgtgtc tgtctaatga catggcatcg ctggggtcac
      901 tttctctggg cctcaacata attatttctt tttttttgcc ccctgctgaa tctatctacc
      961 agagcacgtg aatagcttta cttttgattt ttcctgagaa agatgagagg aactgtatgt
     1021 gagtgtactt ttctctaggg gacagtaagg aagggcactg tgaacttacc tttttt
//
LOCUS       KCKM01002011             945 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31636apa ultra-conserved element locus
            uce-1762, sequence.
ACCESSION   KCKM01002011
VERSION     KCKM01002011.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 945)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 945)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..945
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31636apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>945
                     /note="ultra-conserved element locus uce-1762"
BASE COUNT          294 a          166 c          175 g          310 t
ORIGIN      
        1 agtgacctac agaaggtagg tatctgcatg ctttttgtta cttaccagga acattaacat
       61 tcacatttaa aattcaaatc agctaaataa acaatttctt tcagataaat agctgatttt
      121 gttcctctca tgttatatta atattaggat tatgaagtct tctgcaccct tgccttactc
      181 cctgactatc tgataattgg gttggcagag tatagctggg gtcatcttgt ttagtttatc
      241 tgcacaagag aaagagtggc aaataataag ggaaagcagc aataaaatag tgaaaaaaat
      301 tgaaaggaag atttaatctt tgaccaattt gaaacatatc ctagagaatc catggagaaa
      361 aagataaagt gtgactatga gtaagttaac taaacatgtt acagcatgtg agagcaaatg
      421 gagttagtcc attgtacatg tttaatttcc tattagtctc tggcgtttac tactctggtc
      481 tgagttgggg catctgtaaa ttcagttaaa tacagtgcat tgtctaaaca tatcacagct
      541 ccaatcagtc acccaggctg ctgataagaa gcctcttgta ttattgaatc tacaataggg
      601 aggctctgca ggcacaaaga taacagctag gtatttcact ttaagtatgg gaagaaacag
      661 tgactcgcct ttgctgctgc agctctgaca tttattacta ctccctgatt tgttttatac
      721 agctgatgtg aatttggttt caggtgcttt atatctcttc ttattcctaa cttaagacct
      781 ctatctgaaa agaagtaagg aaaaacaagt aaaccaaaat cagctttcat agtattacat
      841 atgtatcagc accctgagca ctttctagtg ctttaagaat gtcttgctgc tttcacctct
      901 gaaggataaa actggggctt ttgtttattc tttccctatt ttgtt
//
LOCUS       KCKM01002012             225 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31651apa ultra-conserved element locus
            uce-5825, sequence.
ACCESSION   KCKM01002012
VERSION     KCKM01002012.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 225)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 225)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31651apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>225
                     /note="ultra-conserved element locus uce-5825"
BASE COUNT           69 a           43 c           37 g           76 t
ORIGIN      
        1 atctgcatgc cagcttttta tttgttttac taactatatc tatttccatt actgcaaggc
       61 tgatggtttg tctcaagagg aaatcaaatc cattaattca gaaatttcaa gcacggctgc
      121 ctctgccata agcagcattt cttatgctaa tagcaaatgt gctgagactg aaaagaactg
      181 acacagctct gttttttatc ataacttgag catttatgta aaaag
//
LOCUS       KCKM01002013             943 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31665apa ultra-conserved element locus
            uce-1732, sequence.
ACCESSION   KCKM01002013
VERSION     KCKM01002013.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 943)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 943)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..943
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31665apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>943
                     /note="ultra-conserved element locus uce-1732"
BASE COUNT          307 a          157 c          229 g          250 t
ORIGIN      
        1 cagacaatag gctacctttc ggtgtaagga ggttgagagg caagaggcac aggaaaacaa
       61 aattaggagc tatgctgaaa gcaaatgagg ataaggcttt cttccaattg tgaccagctg
      121 tcttcttttg tgcacccact ggatgctcct gatgtgctgg actagaagag acatgagcaa
      181 agtagaaaca atgacatttt gctactgtat gaattccctc tcccttcact taatcctgtt
      241 cttattgggg ccttatgctg aaagctgata attttgatgg cccctgaata aagccagtgg
      301 cttgaattcc tgccaccagc ccccttataa tgaatagggc taatgaatgc tagtaagtgg
      361 taggaatctg tgaccagctg catcaaggca ggtaatacag ctcagattta attgggagca
      421 ggtattggaa ggctgtatta ctttaattgg tgagggggtt ttctaaatgg aaaggacaaa
      481 gtataatgga caaattgtgc tgtacaatag cacttaagcc gggattgtat gcattcgtta
      541 atctgttgag gaatgaggca attctaaaca attttctcag tgaaaccaac tccagaaagc
      601 ttgtcccttt tgttctccct tgggaaaatg caagattgaa acagaaaata cctttaccga
      661 ggcaatcatt tgccacgtgt ggaaagcgga tacagctgta aactatgaaa gagggatctt
      721 tgtagtacaa taaaggatgg aaaaagagat aaagctgggg ataagagtgg gcctgtcact
      781 gcatccaaag gaggaataaa gtgatgacat ttacagtgac agatgagact gtaaagagaa
      841 ctcaggacaa tttagagagg gaaatttgat atttaaaaga aagggctgtg ataattaaaa
      901 gtagcattac attaaactgt tacgcatgtc attagtgaca gaa
//
LOCUS       KCKM01002014            1146 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31681apa ultra-conserved element locus
            uce-3982, sequence.
ACCESSION   KCKM01002014
VERSION     KCKM01002014.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1146)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1146)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1146
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31681apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1146
                     /note="ultra-conserved element locus uce-3982"
BASE COUNT          354 a          248 c          235 g          309 t
ORIGIN      
        1 cttgaggaca cagagtgctt tattctgcct ggctgttcct ccatatcatt cctgaaaagt
       61 tttcataagt gtgctaatcc taaaaacgtt tcggtttatg agtaggtcag tcttatgcca
      121 ttttacatct atcctcctac ctcccatacc gtgcaccacc tgggaatcca aaagcaggct
      181 cacaaaacag cataacattt tctggctatt tatttatttg ctgcacttac tttctaatgg
      241 agtgtgtgca acatcatatt taatacatga ccttagaaac ttaaaaacac atccgcttct
      301 cccaaagaat atacagctgc cagagaaaag gggacattca gtaaactgca tgtcactatc
      361 agctattgat agccagtgat ttgttctgaa tccaaaggct aaaccaaacc tcatgctgct
      421 gtgtgtcaga tgcaattggt ccaaagtcaa agttttacag ctcagacagg gtgcacttta
      481 tccttcaggc tgctacttaa gatagccatg accctgagga gaaccagtca acaaaacaga
      541 cagacaagag gatgtgattt gtatgcatcc ctgagcctgc tcaaatcacc tctgacctgc
      601 aggtcaggct gcaaatgaca gcagagtgca tgcacctgat cagacagcac attctcatta
      661 gaaagcctgg gaaaaggggg cagctacact gtgtttactc atagaccaaa tgcaatctac
      721 ccaggaaatg agaagaaaaa agatcaattt agctcaacag aaggatgtga gcgacatgta
      781 agtatgttat gaaattccaa ataaaactgc ttattcttat aaaccctgac gagagcttgc
      841 tgctggggtg aggtaccaag aagacaggtt agcaatgaaa aagagttatt tttatgctgc
      901 agaatgccgt gccaggagtc ttcactgggg tgcatagccg ctactctaat agactgagat
      961 ccacgatcaa agtcatttac aggcttgatt tgctgctgat actagttgaa tatcagtaca
     1021 gtttgctaat tcgatagtca tgtagtcatt gctggtaatt tacatcagca gtatgcaaat
     1081 ttatccaaca gtgaaggctg ggtttatcca gcagaagggc agcattcaca caaaaatcca
     1141 ggcttt
//
LOCUS       KCKM01002015             652 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31697apa ultra-conserved element locus
            uce-5709, sequence.
ACCESSION   KCKM01002015
VERSION     KCKM01002015.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 652)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 652)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..652
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31697apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>652
                     /note="ultra-conserved element locus uce-5709"
BASE COUNT          184 a          118 c          141 g          209 t
ORIGIN      
        1 aggggaaggg aggggggaga gaggcgctga tacagtttgg tttcttttct tattttcctc
       61 tcctttctcc ggcgctcagt cttttgtgtc agctttcaga aatgctctgt ttgactggca
      121 gcctgtcaca gatcagttac cacctaaagc cgcttggcag ggagaggtga cggcccagga
      181 agggatctaa gtgggtttat cagtgcttct ttacgcctcg tgagctcctt gacacaaaag
      241 gaaagggtat taaagatcta aagcgagccc aaaagcgtga aagctcctta taggctgcaa
      301 gatgcggatg tgactaaatt tttaaatatt tcgagttgat gctattcatt ttgccaatag
      361 agtagaaaga atttttgtta cagaaatgag tgtatgttcc acttgagtga gatttcgaaa
      421 agggaggaag tccctaaata tgtgctcgga atattacaac taccctgtat ttacaatcat
      481 gcatctcttt tgaatatata taaaatctga catatctttt ttatttaaaa aaaaccacca
      541 aacccacagt catttagcac atacggtatt caactccctg ctactgttgt tgaattcatt
      601 tagagctttt gtgtttattt gtttgttaaa gtttaaacat tataacgtag ta
//
LOCUS       KCKM01002016             444 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31713apa ultra-conserved element locus
            uce-6316, sequence.
ACCESSION   KCKM01002016
VERSION     KCKM01002016.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 444)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 444)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31713apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>444
                     /note="ultra-conserved element locus uce-6316"
BASE COUNT          151 a           76 c           65 g          152 t
ORIGIN      
        1 tcctagcaat cagctagtaa cacaactgct tgtgctaatg aacccaaagc tgttaatgtg
       61 gtttcttcag ttaaattgat tcatgaattt tgaagagaac attatctaat gaattttctt
      121 tgaatagaaa gcaattaaaa ggacaaatca gtctgattaa ccccaaagtc accctactgc
      181 cacaaatggt gtacagtttg aaattatatc ataaaaaact agagcagatt tgctatctct
      241 ttgccctcta ctaatccatg taaattaatg aacaacaaag ttaatttctt tgatgaccct
      301 tttctcgtat cacctggatt atgctgatgt ttaatttgct taatgttata ataaagacta
      361 aacagatttt ttcaatgaag tgattatcat tcccttcagt taagaagtga tttttattat
      421 ttaacacaca cagaacggtg tatg
//
LOCUS       KCKM01002017             614 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31729apa ultra-conserved element locus
            uce-6601, sequence.
ACCESSION   KCKM01002017
VERSION     KCKM01002017.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 614)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 614)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..614
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31729apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>614
                     /note="ultra-conserved element locus uce-6601"
BASE COUNT          192 a          125 c           91 g          206 t
ORIGIN      
        1 aaaaaaaaga atactggcac acttaattct tatacccaat catccagtac agtttatcaa
       61 ctgctttatg actggcacta gtgcacagat tgaaggattt caagactact gtatataaat
      121 ctagcaactg cgttaggcat aagctccctg gccttctaac actaagcaaa gctgtactga
      181 caataaaagt aaaccaaaaa gacctgacaa caattattct gaacacttgc taaatgtcat
      241 cattaaagca ctctcgtgat taaacaaagc agaagtgagg aaagaagaca agattgtgtt
      301 tgcgcaaaaa actataacta caattagttc caaaatttta tacatgttaa atgttttgtt
      361 atctattctg ttatcaaaca aactttaaac tctgtcttcc aatttgttcc tctcaacatc
      421 aacattttta aaaatttgct ttatttgtat gtgttttttt tttccccatc ttatttattt
      481 ttcagaggag tctcagctgt ttgggacctg aggttgattt gctttgaggc ttcgtagtgc
      541 tcttctcgca gctgcagatt tggcaatcct gtagcttctg ccaacacctt taaactttcc
      601 ctttcctaca actt
//
LOCUS       KCKM01002018             389 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31744apa ultra-conserved element locus
            uce-5970, sequence.
ACCESSION   KCKM01002018
VERSION     KCKM01002018.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 389)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 389)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31744apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>389
                     /note="ultra-conserved element locus uce-5970"
BASE COUNT          115 a           87 c           72 g          115 t
ORIGIN      
        1 tgtctgcaaa cattttaatg agcaaaaata gttgattgta aatcaggaaa atgtactggg
       61 ctttctaagc tccaagttgg caacagcttg ttgagagtaa atcctctcat ggaaggtttt
      121 gctaatctga ataaattcaa tttcaaaatc cttccttgat ctaagcttgc ttaagctctc
      181 accaaggcct gaggaccctg agggtcaatt ccaataacaa aagataagaa aaaactgccc
      241 tttctcatat ctctttgcaa tacactataa gctgttacct cactgcaaaa aatctttagg
      301 tttaatgaag tcgccttttg atacttttgg aggatgaagt tcaacgcttc ccaccccggt
      361 gcatgtctgc tccgcatgcc gcccgggac
//
LOCUS       KCKM01002019             620 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31760apa ultra-conserved element locus
            uce-6317, sequence.
ACCESSION   KCKM01002019
VERSION     KCKM01002019.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 620)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 620)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..620
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31760apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>620
                     /note="ultra-conserved element locus uce-6317"
BASE COUNT          189 a          115 c          131 g          185 t
ORIGIN      
        1 gtgggcgcgg gagcggggcc tcccgtcggc cgcagtttcc aggcagccgg tgccagcaaa
       61 acccgatacc gtgtgatgtg tggaagcaag gtacaactgg aataaatgaa atttcaaaaa
      121 ataagcccct ttttaaaggc tgattgtaac agtcctgctg ggtattgtaa atgcctcagg
      181 tgcacttgat accactgttg cgttggctac taatttttat ggaaagatgg attgaacttc
      241 aatttaagaa tattcggtaa tccctctcag gacatactgt aacagctggt atttctgtgt
      301 tgcagcaaat cgattccata cagcggtcag cgatgcttat ggctgtgctc cgcttccaaa
      361 gcattttaaa taaagccagc caaagaaaat aacatcatca ctgcaaaaat gtagcttaat
      421 ttgcaagtta gaaaaaaaat aaaatcctca ttccattcca gcaaaatatt aagcatttta
      481 ctggtaagga tttcatcagg tcatttattt ttcattaata tatatttagg atctgggggg
      541 aataacttta tgccgtgtat aagtttctta aataatgagg agcttgaggt ttttttatac
      601 caaatgattt accatgaagt
//
LOCUS       KCKM01002020             797 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31774apa ultra-conserved element locus
            uce-6189, sequence.
ACCESSION   KCKM01002020
VERSION     KCKM01002020.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 797)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 797)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..797
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31774apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>797
                     /note="ultra-conserved element locus uce-6189"
BASE COUNT          277 a          134 c          140 g          246 t
ORIGIN      
        1 ttatgttatc attcaagagt cattgattta aaagagaaaa ataaaaacca ggccacatga
       61 ctattggcaa cagaggataa aacacattgt ttccagacaa atccccatca aagacatatg
      121 actcaggact ctgaagtcag aatatcttca tatcttaaat ttccataagt acttccaaga
      181 aaagctggag tttggctgta ggatttgcta cacactttcc actagtgatt gataacaaga
      241 agtaacatta gcagtatttt tcccccgtca ttcgtctgaa gctaatggag tcaaggattt
      301 gttacttgat ctaatggcaa tagctttccg atagacatgc acagaatcat tgattagttt
      361 gtcctctcct tgtttgcgtt ggaacactgt tcaatttaca ccaattaaag aatgcttggt
      421 ttgtgtattg aagaataatt aaggggtgga attccctata ggctactaaa aatgacatct
      481 gacttgaatg gtgattacag catgaagaca gcattagtat ttaaatagtt tgactgctat
      541 ataaaatcat taccgcatct taccatgaaa aaaagcatta gttaattttg cctataacaa
      601 aattagatgt atgtatttgc ttggtcactt taagtaaatt tgacaagact aatcttaaag
      661 caagcgttcc aggtttggtg gaagttgcag atagagcact gtttaaagta atcatcttga
      721 tagatatata tataatctcc aaccaaaata caaatatgca caaatgaata gcagagtttt
      781 gccagagacg ctcaaat
//
LOCUS       KCKM01002021             995 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31790apa ultra-conserved element locus
            uce-6329, sequence.
ACCESSION   KCKM01002021
VERSION     KCKM01002021.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 995)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 995)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..995
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31790apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>995
                     /note="ultra-conserved element locus uce-6329"
BASE COUNT          370 a          207 c          169 g          249 t
ORIGIN      
        1 catattaaaa ctgcaccaat gtcaccttgc agaagatcca cacctatttt aaacaaaaca
       61 ccactctctt gtctattcct atccagagac ctatttaaac agactggcat ttgaaataaa
      121 gaagcaggtt ttataaggaa agcaggtttc ccacagttag gtgaactgca taacaaaata
      181 gactaatggc aaaatattac atatacctac acaataaaaa tatggacaaa actttctccc
      241 ccccaattat acagtgtttc tcctatataa aaatgcatac tgcttcagac agaagccact
      301 aaaatccatc tgagtagtat agcatacaga gaatcctgtt gtctagcaac caagtgcacc
      361 aagaataatt cctgcttata ttcagagatg tataaatttc ttcatgccag tgcacataca
      421 cacacacaca cacacaagca catacctttt gcccctctga gtacaaatcc aaatccttca
      481 ttgtcttttt tctgcaggac cactgccttt tcttctatta tgcagtcact gtagagagaa
      541 ttccgaggat agcgaccatt attacatccc ttcatcacca ctgtagtagc tgctcctcca
      601 gtgtgcaggt tcatcatcat cacagcccgt taatcaaata atattgcagt aaccaagcat
      661 gggaaaatat agaacaaata gtagcgaggg gaagacaaag accaagctga atgataaaag
      721 agaacatgac aaagcaactt aaagggaata aaaaaggcag agaggaaaaa gaaagaagaa
      781 gaaatcatgc atggtggttt gtgttctata tgaatgactg aatgaacatg tgatcatgta
      841 atctgtgggc tagctaggac tctaaaagga aaaaaagtaa gtgaactgaa tgacagtatc
      901 attaataaac tcctcaatcg tggatgtacc agatgcatct tctagtgaag ccaaaatgaa
      961 accaaccaga agaaaaatga ggcagcattt taaat
//
LOCUS       KCKM01002022             823 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31806apa ultra-conserved element locus
            uce-962, sequence.
ACCESSION   KCKM01002022
VERSION     KCKM01002022.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 823)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 823)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..823
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31806apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>823
                     /note="ultra-conserved element locus uce-962"
BASE COUNT          219 a          176 c          166 g          262 t
ORIGIN      
        1 ttttttcaaa agagaacata aaaagctact gatcgaaaag tgagttcgtt tcttaaatgt
       61 tatttacata aaaaaacatc cactgttttt tcctgcaggt agtgctttac aggctacata
      121 agaggaattt tcaaaattcc aagataaaac cattttcctc caaaagcaga aaaggaaaac
      181 atcagctctt ttttttcccc ctctcctctt aaatcagtga caagttacaa gtttgctagc
      241 actaacagat actgtattcc atgatctagg gattgtgtta attaatgtgg ctctcatctg
      301 ttggaggtgt cgctcttcat tagcctgtat tttacacact gccgtgcttc atttttggaa
      361 tgaggtggtg aggggataac ctagccagcc atccttgttt gatctttgcg atacatacgc
      421 aatgcagaat gcctcagctc tcttggttcc ctgccctgtc ctgctaatcc cagctgagct
      481 cattatggtg tagccttgct gctactcctg gagccagagc tgtccaagct aattactggt
      541 agcagcagag ctgcctgtta agggtctggt gtggatctgc taacatggtc cttggtagtg
      601 acctgcaaaa agcacgaggg agttgctctc tttcttgctg tgcacagcct gtcctttggg
      661 tttagtactg atcccttcac acagctcttt tagctgtagt aagtgtaaaa cttggtgaag
      721 gaaactctta ctttagaaaa catacagttt gctgctttga tctcataatt cataggccat
      781 tatactcaga caggcaaagt aagaaaatgt ccttttatac tag
//
LOCUS       KCKM01002023             337 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31820apa ultra-conserved element locus
            uce-7167, sequence.
ACCESSION   KCKM01002023
VERSION     KCKM01002023.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 337)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 337)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31820apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>337
                     /note="ultra-conserved element locus uce-7167"
BASE COUNT          113 a           58 c           72 g           94 t
ORIGIN      
        1 aaaaatgaca aaggttgatt gtattgtaat tcagcattgg agtaacaggt tgtaaaaagg
       61 gctataagaa tcagatgaaa tatgtgtcag tcttaccttt ctatgttttt agactctctg
      121 accccagaga tagaagctga ccgcagcggg ggcagaacag atgctgaaag gacaatacaa
      181 ggtaggaatt tgcaaaaggc tataaatcta gatcttgcta tatgagtttt tcctcagctt
      241 tagactgcta ttcaagcatg tagcctacca tctgggccac atcaaaacaa gttcaaacaa
      301 ggtcaagttc atcttgcttg tttataagag agaatac
//
LOCUS       KCKM01002024             790 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31834apa ultra-conserved element locus
            uce-4992, sequence.
ACCESSION   KCKM01002024
VERSION     KCKM01002024.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 790)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 790)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..790
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31834apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>790
                     /note="ultra-conserved element locus uce-4992"
BASE COUNT          249 a          151 c          134 g          256 t
ORIGIN      
        1 accacactag caggtcatct tgtactagaa tgtgatgaaa ttagctctct gtagagttag
       61 acatcccttg ttgaaaggca ctgtctgcat attcagtatt aagattacac taaaccccta
      121 aaatacactg gtacgatttc tgagcttgtt cctccctcac atttcatgtg gtgtatttct
      181 caaacagcta acctgttcat tctctctgtt taccagtatc tgcctgatga agtagaactg
      241 aaaacactgt tttgtcctgg aacgtgaaaa agtttggagt tcaaaacaat tgcttgctac
      301 aaaaataaag gcaggccttt cctatgaaat ctatgaactt gaaacaggga tacagaacta
      361 gttgttgcca ataactttaa cttcatttat ctatatttgg caaaaattgt gctgcagctg
      421 gagatgaaat gctgagctaa ataactgcag cgacgtgagc tccaaaacag caattactaa
      481 gctgtgctgc cttgtgtaag attttacttt tatttattgt atttaaaaca actctctagc
      541 tatgtacagt acaacaagaa ctccctgatc aaatgatgtc tgattgcaag gcatgtcagc
      601 tccactgtca atatagttaa gtgtttagca atgcaaccat gtcttttgaa gccaaattaa
      661 agtgatatgg atggcagttt taccattcta catacatttt agtatctcta ggtgcaagga
      721 ataactaatt ttaaacctaa acttgactta ttccaaacac tgagtatttc ttattattat
      781 tataaaagct
//
LOCUS       KCKM01002025             396 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31849apa ultra-conserved element locus
            uce-4779, sequence.
ACCESSION   KCKM01002025
VERSION     KCKM01002025.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 396)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 396)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31849apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>396
                     /note="ultra-conserved element locus uce-4779"
BASE COUNT          141 a           56 c           69 g          130 t
ORIGIN      
        1 aaaatatata ttgtgaattt ggagtgacta ttgtgtgaag cacttaaaga tgactgctga
       61 aaagggctgt atacccacca gattattaaa attgcaaact tagttttcca ttaacgtttt
      121 ctattttggc atcttaaaaa gagtggaagt tgatttcagc agaacatcct gtggggaaat
      181 tagttcattt tgctaaagta tcttaataat tacagtgaca tcaaggttaa ttgcttaatc
      241 tgtattgcca tagtgcagtc ctgtagaaat cccgacacaa tctgttctac aattagtgcc
      301 agaatatcca tatatagaac atgttgtaac ctaaataaat aaataaataa gatctgatac
      361 gattaataaa taagatttac aaaagcatgt gtgtgt
//
LOCUS       KCKM01002026             869 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31865apa ultra-conserved element locus
            uce-3328, sequence.
ACCESSION   KCKM01002026
VERSION     KCKM01002026.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 869)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 869)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..869
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31865apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>869
                     /note="ultra-conserved element locus uce-3328"
BASE COUNT          285 a          135 c          202 g          247 t
ORIGIN      
        1 tgaggatgaa gctgagtcaa caaaactcat tgcacccgaa atatattgcc atgtgggtgt
       61 ttttctcctg aaatgttaag aggtaaaaag cactagcttt tatccagcat gccatccagt
      121 catctgagta attactggct taaagcaaat gatgtctaca taccagagac agataaagtt
      181 aaaagtcaat tcattttttc tcctcaagaa atgatttggg ttttgaagta aattgaacat
      241 aaagagtagg aaggaagaag aaaaatgtga aattttatca taccatttta agttcgatta
      301 tgtcacatag aaagcaaaag gcaatagagt ataaaggaat ctaatccata aaggaagaga
      361 aaaaggttaa aggagtcaac agtaattaaa tggtgattga agctgaaaga aaattggtct
      421 gtgttagctg aaggccattc ttgccttttg ggatgttatg catcggtgaa gaggggaaag
      481 aaaggttttt cttgttttga tatggaaata tatgtcacat cttcttagcc tatggtgctg
      541 tgactcaaga ctgcactgag tttctggtac actgattcta gtgtcctatg catgcttgtg
      601 tgtattgtgt aaagataaga tgctctaaca aagcttggca aggtcaaaag gcatgggagc
      661 tccggcagtt tgcatgctgt tttgtcttgg ggcaaaaaag aaaagcagcc taaagcaaat
      721 ggatctaaat aggggtaaca ctgacacacc catgtaaaag ctgtgcaata tccatgacta
      781 ggagatgcag tgatccaccc actatgtgtt taaagtctgg ctgtttggcc agctcttctg
      841 aagggatatt cagaggtgct ggcatgaac
//
LOCUS       KCKM01002027            1112 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31880apa ultra-conserved element locus
            uce-318, sequence.
ACCESSION   KCKM01002027
VERSION     KCKM01002027.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1112)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1112)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1112
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31880apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1112
                     /note="ultra-conserved element locus uce-318"
BASE COUNT          343 a          206 c          220 g          343 t
ORIGIN      
        1 ccataggtgc catgtccaga agcttcccct cttctcattt ccgaacacca gctaagctga
       61 gaccgtttga actcgttcca cttctgagtg agcaaatttt gaccatgata gtttcagtta
      121 gatttaagag gcaaggcaga agtagaagtc agtgtagcag tgaggtacat taatctatgg
      181 tgtcagtctt tctttgcgtt gcttttttat tcttacagtt tgatagataa ttcatttata
      241 tgcaatagaa aaaatttact ttgcttcatg cagcacattt ataaatgcat cataaagaaa
      301 tagtttttaa aaaggttatt gctgctttga aaaaatatcc tggacttggc tctctccttt
      361 tgataccgtt ttccctgtga tgtaactgag tgattttgca gcagaaagct ccaaaaatta
      421 aacctgaact ttccaaatag cttcctaata accgttgccc aaatcaatgg ggctccatga
      481 atattttgac acagtttaaa tgggtttgta tcctcaccat tgagatctgg tgatttagcc
      541 tgtcaggttg caaatgtgga aatatcacct ctcactgagc aaagtccaat atctcattag
      601 aaatgaaaat agaagagaag ggaagcacaa atgctgtcag tggcagtgag gaaagaaatt
      661 aaacctccgg aggcctgtat atcttataca aaagattatg cactgccagg ctgtataaat
      721 catgccaagg ctctggggct gcaatgggct agaaaataaa aaaccataaa agtgtcatat
      781 tgaaatacag tcactgagaa ttcttttatg atgagtctaa attcgcctga cattctcgca
      841 gattcagggg cctgcttgga ttgtttatac ccagactttt gctgtcagtc acgaagtccc
      901 agtttccaca gcaaattatt ctaaacaggg cttattatca aggcataaaa aagttaaaac
      961 acagatggct ggagagttcc tgtttaattt aaatgccctg tggcccacat caatgtgagt
     1021 ctgtcttgtc ctagatttac tatcaataaa ttggctgcac ttattagata gcagagtttt
     1081 aagatgatgg ttggaagtat ttcaaataga gt
//
LOCUS       KCKM01002028             503 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31896apa ultra-conserved element locus
            uce-7983, sequence.
ACCESSION   KCKM01002028
VERSION     KCKM01002028.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 503)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 503)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31896apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>503
                     /note="ultra-conserved element locus uce-7983"
BASE COUNT          153 a          113 c          106 g          131 t
ORIGIN      
        1 ccaggcgagc cagagtattt agtattatca tttaaagctc tcatagttta ttacggggaa
       61 gtaacgggct cgcattctga agcctgtctc cacccattgc attcctggtg atttttcaat
      121 tgcaaactcc aaggcccagt tatttcatta attcagcacc caagtagcga ggcttttctc
      181 tcacatcttt cagtctcctt ttagcaaatt atcccatgac ggaggattta ttcagtcaaa
      241 gacctcggac tttgagaggc aacaaaagaa tcaagagact ttctggtcca cctgcctggc
      301 gaatgatgag gcagggtaaa gcctccccta gagaaaccaa tcaaaccatt gtgtggcaca
      361 gtcagacctt ttcaactgtc aagccaggag agcaggaaaa gagatgaaag aactcaggat
      421 gaagctacca tttacagaac catgtgggaa tggtctccga agatttaata attgggatgg
      481 aactcaactt tctgaaaact aaa
//
LOCUS       KCKM01002029             715 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31912apa ultra-conserved element locus
            uce-4078, sequence.
ACCESSION   KCKM01002029
VERSION     KCKM01002029.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 715)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 715)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..715
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31912apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>715
                     /note="ultra-conserved element locus uce-4078"
BASE COUNT          244 a          118 c          146 g          207 t
ORIGIN      
        1 aataataata aaaaaagata taaaaatgtg aaagccatta aaaaatgctg tttaaactta
       61 aaaataaatg caatggcata gccacattct ttaaaagctt tgctctgctc agaatggctt
      121 tgttattagt gattcttaat gcatgagata gtggtttgga ataaatcttt aagtaattca
      181 aaacaaggac tcttcagtaa atagttgaaa ttaaaggggg agttagagtc atctggtttc
      241 cattaggatg ataaaatagt tcacttgaaa ccttttacaa gatgctttgt tactgggagg
      301 tgtctgtgca tctcactcca tcactggcca tttgacacaa cataaaaggc ttcaaaagcc
      361 atgctaggcc tcttaatcaa aaactaattg taatagatat tggggagtgt taacactgtg
      421 accgcgaggt tgtatcttcg gtgtataagc aggagtgaac attaaacaca accctgagtt
      481 gataggcctt atcagaattt cagagctaag tgctaagtac tgcagcccgg tatctccggg
      541 ctgttgcttt gtaccacttt tggagttaat tgcactgtag gacttcatct tcccaacaaa
      601 atttatagca tcctcagaga aattggaagc ccgctgaaga aactgctgca gtttacagga
      661 gttcagagaa accatgggga aaagaaaaaa aaatattgta atttctagca agagg
//
LOCUS       KCKM01002030             862 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31942apa ultra-conserved element locus
            uce-6923, sequence.
ACCESSION   KCKM01002030
VERSION     KCKM01002030.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 862)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 862)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..862
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31942apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>862
                     /note="ultra-conserved element locus uce-6923"
BASE COUNT          266 a          187 c          163 g          246 t
ORIGIN      
        1 caaagtcttt gaataaagtt tctgtatttt ctttgtcaga gcatgtgatg tgaaaaaccc
       61 cagctgcaga tttgaagaca ttttctgcct agaagtgtgt gttattcacc tcagtcgagg
      121 ctactctgcc aaagtctttt ctgcatggaa cctgtctgca atcacaaagt agctagagaa
      181 ggggctatgt cagttttttt tttttatcct cttaaaagaa gaacaaagaa aacgactcgt
      241 caaaacttag ttcccagtga tcgataagga gcagacagag ataagttttc ttaatggctt
      301 ccttttcaaa agaggcgtat gatgccgtcc gcgaggtaac aacttcttcg ggaacatcac
      361 agcaagagac actggttcat gtaaggttca cccattaccc tgccctccag ccagctggag
      421 gctaaccagc ctgatcaccc tacccctccg caacacaggc ccaatgattt ttacatcaag
      481 cagcctgatg tactgctctg ccatctacca atcccttttc aatattgatc cattcctaaa
      541 tgagccttcc ctgctttgta ccatgagcaa taattaaaaa agcagcacat tgattttaac
      601 taatattatg aaggatctgg atgtgcacat gcttacaaaa tagcggactt tacccatcat
      661 tcatagcaca acaaaggatc ctgattaaag tttggacaca gggaaagaga aatgtgtctg
      721 caattgaacg tgtcaaaact tatacctatt ctgttttatt ataaatcttg tttcggcacc
      781 gagggaccca gtcttataat tttcattaaa ataaattaga agatgcagaa gcctggagtg
      841 aatacagtgt aagaaactga aa
//
LOCUS       KCKM01002031             735 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31957apa ultra-conserved element locus
            uce-424, sequence.
ACCESSION   KCKM01002031
VERSION     KCKM01002031.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 735)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 735)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..735
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31957apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>735
                     /note="ultra-conserved element locus uce-424"
BASE COUNT          230 a          138 c          144 g          223 t
ORIGIN      
        1 gcaaatgttt aaaaaaataa tattttctct tttttaatgg aagccagaat gttatgagaa
       61 agtgaataag cacagacctg aagattatga aatttgctta agtgctaatg ggttgattgc
      121 tgaattacat cctgctgtct ttactggaaa ttgattgact ggtgctgcag gtcttcacac
      181 ttgatgctcg gatttgactc gaaaattctg ccaagtcttt tactctgaaa tttatcttaa
      241 ttagatctga aagacctgcc acagcagaat agtcacaccg attaaaatga aaaacaggag
      301 aaattactga tcaaattaat cataatgtcg ggttacagct gtaggtctgg tgtaatttgc
      361 cactccagtg agttacatcg gcctaggcag aggaaagaga gctggtttta cgctgatcca
      421 taacacaagg cagcttcggg ctgcccatca ggatgtttgt tctattcatt ctcttggctt
      481 attctgacct tagtgttgca actggaaaca tgtaagacaa aagaaaaaga aacctcttat
      541 acaaggggtc atgctagaaa cacgagcttt ccaaaccctt cttgtttcat tttttccctt
      601 tctccagcaa ccttctactt ttgtttgaag taaccaacaa ttaattatgt ggaaactgga
      661 aaattagaag gtcagatttt accacctcag gcacaagatc tcctagtacg tcaggacatg
      721 aggaaattag aatca
//
LOCUS       KCKM01002032             692 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31973apa ultra-conserved element locus
            uce-1976, sequence.
ACCESSION   KCKM01002032
VERSION     KCKM01002032.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 692)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 692)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31973apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>692
                     /note="ultra-conserved element locus uce-1976"
BASE COUNT          238 a          128 c          132 g          194 t
ORIGIN      
        1 ttttaaaatc atgaaaatcc acaaaggttc taaattggta cccccatatt tctcccatga
       61 ttatagggag cgtcttgatc tagtatccct tcgcaaacaa atcaaaggct ttttattatc
      121 aaaagccagt cctgtgctca agaaaataag cttgaccact accgattgta aagaaccctt
      181 aaagctgggc acctgcagaa cataacccaa cttctcacct gctgtgctgt gttcatggca
      241 ccctgcctgg aggtaagctc tgcggggatt ggtaggctcc atgcctcctc aatactagga
      301 agtaatttag ttttattctg tagactacct tgtggaaggt tacacaactg agcctaggaa
      361 aaattatgta aaaagcaaat ttaacacaag cctactttag taagagcaag tccatgaaat
      421 cttcctaaat gctgtagcta attaagtctt aaagagagga tagatttaaa atttggggtt
      481 ttagaaaggt tctaagtata aagagggtaa ccagaatata aacctttgtg agaatcagaa
      541 caaagatgag ctctggattc agaggtctca taattccttt tttctgaaat tgcaaacaag
      601 agtgaaagat agtgtgtgca ttctctctct acgttatgag aacttaaaaa tgtagacaat
      661 acaaagaaaa aagcaaaatg atgtaaaaca gt
//
LOCUS       KCKM01002033             925 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 31989apa ultra-conserved element locus
            uce-4511, sequence.
ACCESSION   KCKM01002033
VERSION     KCKM01002033.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 925)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 925)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..925
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31989apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>925
                     /note="ultra-conserved element locus uce-4511"
BASE COUNT          237 a          195 c          249 g          244 t
ORIGIN      
        1 tgcttcctgc ctgtaacctg aattgagagg ctgaaattca gaccaaatca gactgtagtg
       61 atgtgatttc taattacttt caaggtcggg aatgaggatg tcagagctat gtgaggaagt
      121 cccctgcatg acggcaagct ccgtacaacg tcagggttaa cggcgctgtg caaagcggtg
      181 ccatctagtc cggccagcgt gagaggagag gaagcacctt tgggcaggaa gcttgttctc
      241 agggtcagga agagcctttg aagggtttgc ttctctcatg gccattactt tgttttaact
      301 cttggttttc ttttttcccc taatgggaat taacgcagcg atccagagca gccctgcaga
      361 ggtacctgtt ctactgcaac cgctacatga accacatgca gagcctgcgc ttcgagcaca
      421 agctctacgc tcaggtgaag cagaagatgg aggagatgca gcagcacaac atgtcgtgga
      481 tcgaggtgca gttcctgaag aaagcagtcg acgtcctctg ccagtgtcgt gccacactca
      541 tgtacactta cgtctttgcc ttctacctca aaaagaataa tcagtccatt atctttgagg
      601 taggagaaaa tgtgcttgtc aggagtttgg attacaaagc taaccgaaat agagatttaa
      661 tgcttggaga agctcttgtc cccagtttta ccaaagtgag tctgtcttaa tgctctgttg
      721 tgcaaaagtt ataggtctgc tgggtgtcct gcacctggag gaggaggtgg aggtacaaga
      781 tgctttcctc tgaaacacaa aagggagtga gattctgtct tgaattggca aagatggcgt
      841 taaagcttaa atcacagtag ggaaagcagt gcttgacact gttgtgtttg taccaggagt
      901 cagtagaggc tttgccagtg ctggt
//
LOCUS       KCKM01002034             765 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32005apa ultra-conserved element locus
            uce-3333, sequence.
ACCESSION   KCKM01002034
VERSION     KCKM01002034.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 765)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 765)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..765
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32005apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>765
                     /note="ultra-conserved element locus uce-3333"
BASE COUNT          200 a          141 c          140 g          284 t
ORIGIN      
        1 tacttttctt tcaagatgtc tcatttatgt tcttcagctg ctgttctgtg atatttgttc
       61 ttacttttca ttaaaaggtt ttattatata aacaaatgca tattttctta tttacctata
      121 cacactgtgt atctctagac ttgtctttac actggcagct tttgtagtag acatcctgcg
      181 tagcgtattc agtttatata tgtcagatcc tcaagggcca tggcttttgc cagataaagc
      241 acttttgatt ttgaggctga tgaaacacag tgctattatt gatctgtgca tgacacagcc
      301 tgtctctctg ctggcagagt gtagcaacat ttatccagga atttgtgaaa tgtcactcgg
      361 atcatgttca taaggtaaac tgtgcaaaaa ccagcatcca tgttgagaat ccatgaggga
      421 ttgaacgtta ctcttactcc ttcctatccc ctatgtcaga caagtggtat ttgttaaggc
      481 aatgtctgtg ttttgtatca gttgttgaag aaagtgtgtt tatcactcag aacactctgt
      541 gcaatatagt gatactgttg ctttactcag ttctttagga cacttgggag aacagtattt
      601 taaatctgta aaagtgatct aaatgttgta agtctacaat ttctgttctg tttgtaacaa
      661 aattactgtt cccgtacagc tccagccagg aagctctgct tatattttgt aaagaattta
      721 gcttttctgg cttcactttt tcttcagaga aatacatgtt cgtca
//
LOCUS       KCKM01002035            1145 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32020apa ultra-conserved element locus
            uce-5286, sequence.
ACCESSION   KCKM01002035
VERSION     KCKM01002035.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1145)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1145)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1145
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32020apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1145
                     /note="ultra-conserved element locus uce-5286"
BASE COUNT          396 a          208 c          251 g          290 t
ORIGIN      
        1 tctgccaaac tgtgccatca ggtcttttta gtcatattcc accagctgag gatatggttt
       61 tcccaagaga aatactgaat ttatcagaag ttataataaa aagaagcaaa ttccccaggg
      121 cgttcacctg cagaataaca caaggccttc ctcccttgga aaggtagatc tgtagttaca
      181 gccttgtaca gagacatagg cataaaaata gcattaaacc aaggaacaag ctctacatta
      241 tactctagtg ataactcgga actgggtgaa acattaaact tggtatatga gtgggttttg
      301 ggaaaatgtt tctagtgcct gtggctcagt gatacatctt agataaatgg caatgatttg
      361 tatttgtccc actgtttcaa gcttctagat aatactggtt ggttttgtta gttgaaattt
      421 ttaatgagag gacttaagaa gacaaaacaa gatgaaagag acaaagagta actctctata
      481 agcttgaaca gacattgaga acagcaccag ctgccacatt tgtacctact ttgtagggct
      541 gcaggtatgc aaggccttca aatgaggctt ccaggtagca atggaaaccg atttctcatc
      601 agccgcataa ctacgccata cacactacgt gcaggatata tggtaaaaaa gaaaaaacaa
      661 ggcaagaggg agcaggggat gaaacaaaaa aaaatgaaaa gcagattagt aaccaataca
      721 agtcatggat ttcttttatc attcgtagcg ctgatacatg cctgagggga ggaagaatac
      781 tttcataata tcgccaggtg gctgtcaggt ttgttcggct gctgtcggta gaataaaacc
      841 gccaagaagc ctggtatggg gaaacaacag aaaagcacaa aggaaccaag aacatgtagt
      901 gacaatgcca ccgcactgat tttggagaaa ggggattttg ctcagatcag gatgtgctcc
      961 attaggttga ttaaggaaat accagtaaaa aattaccaaa accttttgtc aatcacagta
     1021 cactttacat ggtaaagtaa gagttaccag ctttgtgtaa agactagaaa atactcagca
     1081 tacaaagatg ctcaaaaaag cattgcagtg atttgttggt gacaagtcca taggggacac
     1141 tcaca
//
LOCUS       KCKM01002036            1042 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32035apa ultra-conserved element locus
            uce-6464, sequence.
ACCESSION   KCKM01002036
VERSION     KCKM01002036.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1042)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1042)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1042
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32035apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1042
                     /note="ultra-conserved element locus uce-6464"
BASE COUNT          255 a          299 c          254 g          234 t
ORIGIN      
        1 ggtgtgaaac gctgctgctc agacgtgtgg ctgttgtaca cctcctctcc aaagcgcaaa
       61 tagctcccca ggctgcgagc tggggagaat ggcccacagt aagtgatggg ctctgactga
      121 tgaattttca cagcaggaaa gcaggagaga ggcaggagac acacacatta cagatttcac
      181 aaacagacag tagcacccgg gaagacaaac accccaagat gtggctgctg gatcagacac
      241 cagcccccag tgctacccag tgatggagaa gtccctgccc tcagccccaa catggggctt
      301 ggaggcagct ctcgccctgc ctgtccctgc caagagaggg ggtgacacca cttctgcggc
      361 cagctcccaa ttttcctcat tacctgctct aagcttctct caaaaataag tggttcctgt
      421 gcaaagccgc taatttggtc ccagcaaata agaaaataag tctggatgtg aaagactggc
      481 gggattttga ccagatgcat gtagaggttg ggtgactagt cttaattagg ccatctttgt
      541 ttacatttga tgtttatcag ctaattggca tggcaaggtg tgagtcacac agctttcctc
      601 tggcatgaaa tcagtttgca ggagaaaaac tgggagaaca aatgatccca attataagaa
      661 aacctactgt gctaattacc atcccacgga ggatggagcc tcccacccgc gggctcacaa
      721 agccgcccgt cctaccatct cccctgcgca gccctggcac tctcctccca cccgcacatc
      781 cctgcccagg gacttgccac gtccccccat caccgcagga gcaaaggtga cacttcacca
      841 gctgctcctt tggggctgca cagcatttct cagggactaa cgctgctgct tacaccactg
      901 ccttttcttt ttttccccat ttggcttggt ggagaccatg tcacagcagc agctcatagg
      961 gactgtcttg tgctcccaac atcgtggtgc ccaccagatc aaagcctgga tgtttgctac
     1021 agtggagctg gactggaatc tc
//
LOCUS       KCKM01002037            1019 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32051apa ultra-conserved element locus
            uce-4915, sequence.
ACCESSION   KCKM01002037
VERSION     KCKM01002037.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1019)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1019)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1019
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32051apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1019
                     /note="ultra-conserved element locus uce-4915"
BASE COUNT          309 a          219 c          191 g          300 t
ORIGIN      
        1 aattttattg ccctcctttg tattgcctga ctccctgacc ttgtagttta tggttagtcc
       61 aaccttcatg tttccatcag aagacatttc tccgctaaaa ttagattcaa gccttttaga
      121 gctgctgata caaaagaaac ccctacgaaa tcctgaaggg tggaactggg gatagtaaca
      181 gcacaggagt aataagcttg ttccctagca agcacgatca aaatgatgga tcttgccaaa
      241 actgccagtt gcccaatttt tgttcttacc aaagctatag ggtttccttc acacccttta
      301 attactcaaa ccttacttaa ggaacgtggt tcaaacaaac aaacataaaa aaaaagttac
      361 aacaacgtag catgatcttg acatacaaga tgtcagaacc attataagcc cctttattgc
      421 cgaatgatgt cttttgtgct tagaggcatg cttgctattc atagatctac tgctcagctg
      481 ttccagtttt tagttctgca taaatgccca ctcattatgt ccagagggtt ttgcctgtag
      541 ctttgtgttt gtagccttga ggcaaatgtc ttgatggctt agggaactcg tagcgaatga
      601 ccaaataaca tcggattttc cacagcaacg aagccattat gggacagcat ttctatgtaa
      661 cagcaccctt cagtgtgcaa tcattataac taaggattta accaggctct ggggacataa
      721 aatcactttg aagccaaaaa tccacagtga aatcttaagc attggatttc tgaaatgctt
      781 ctcagagctg cttcagtcag gcagctttgt cagttacagt aaaaccaagc gaaggagaag
      841 gaattttatg cacatcttat gaatccaagt attcagacct gtgcatgcag tgctgggggt
      901 gcagcatgca ttcattgcac acacagtttc tttacagtca catatggaac cagcataagc
      961 acacacacaa gtcctagtta atgttaatat tttaaagcac agaattttat ctattgcta
//
LOCUS       KCKM01002038            1134 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32067apa ultra-conserved element locus
            uce-4982, sequence.
ACCESSION   KCKM01002038
VERSION     KCKM01002038.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1134)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1134)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1134
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32067apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1134
                     /note="ultra-conserved element locus uce-4982"
BASE COUNT          326 a          215 c          232 g          361 t
ORIGIN      
        1 gagaagagag tatccagctt ccttctcagg tggcagcttc agtgtctttg aggcactaga
       61 gagatgcatc ttacagagta gaaaccagtc acactgacct ccaccacata gctgaaaaaa
      121 ggtttagaag catctttaaa atggagtttg tgcctcattt tttgaagtag tatttgacct
      181 ataacttctg ggtaattacc cttaacaaag acaccactgt gactcatggc ctctggcatt
      241 gtcagccacg tgagatctga agggtcccag atacccagta attaaaaagc tgtttgattg
      301 ctaaggcaat ataaaaatag ttattaccta ggatacatca aaatgtaaac ctgaatctta
      361 aactatggaa ggaaacactt ctcatatttg cagggtttgt agtgtggaag ctttcacaga
      421 tgaagcagct aagcaaatgg ttataaggct gtggatgtaa ctgttctttt aaatatatct
      481 gtgttcctgt aatagtgttg tgttgttaat gaaccttgtg tcttatttca gagagattcc
      541 ccctctacat ccagacagtc cccagctaat ggtcatagca gcactaacaa ttctgtttcg
      601 gtaagattta cagttccaca cagagaaagt gtgaaagttt tgttggtgct catctgccat
      661 tactgttata cttatcgtgt ggtcagtgga gaattttgtc ctgctgatag atccaaggtt
      721 attacatatg taactcccca ttttcttttt aagggtcttt tccaacatag tcttcttatt
      781 aaaagccata tagtgaatta aatgttaata tctgtgatct gacacttcag tcatccttaa
      841 atcattgtta gcagtttcct caaaactaag cagaggttta atttccaccc tgaactttgg
      901 aagcagtgtt tgaagaaaga gtaactgtgc agttgatatt tcgagacatt ttagactctt
      961 taagttttgt gttttgagag acctctggaa cgtgtgctgg tttccgctat ctgagttaac
     1021 gaattggtgt gccctctgct ctcgtggtac gtgcacatac tttgtgaaac atgagccttg
     1081 cctggacatg aaaagcaaaa ggaagtggct ttaaactgca ctacaaacca agct
//
LOCUS       KCKM01002039            1272 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32082apa ultra-conserved element locus
            uce-1131, sequence.
ACCESSION   KCKM01002039
VERSION     KCKM01002039.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1272)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1272)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1272
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32082apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1272
                     /note="ultra-conserved element locus uce-1131"
BASE COUNT          387 a          202 c          216 g          467 t
ORIGIN      
        1 ggacagataa ttttttcatt atcatttgga ggcctgattt aaaatatatt actttgagaa
       61 atacaacatt gagattttaa ccagccatat tgtgctacag cttattgttc tgttgcaggg
      121 ataatgcatt aatgtgtgaa tttttataca tttatctgtt atatgtagtc atggcttgct
      181 ttgcgatctt ctgttttatt aagctggaaa tttataaaga tgtatatttt aaaactactg
      241 gtcattaggt agtatgtcgc agtttgagaa gtattttttg tttgttttta agagtaactt
      301 tttttactat cctctctgta ttttcccatg agattaaggt cgtatttttt atgcatgttg
      361 aaaaatattc acttatcagt atgggtgcaa ctgtaaacaa gtgataaagt gacaacattt
      421 acaacagcaa aactgacagc atttgcttta attttctgcc atttttgtaa ttatatcaat
      481 caagaccaaa actaaaatga tattttagca tgctataaga aatgaggaat tcagatctta
      541 aaagaccatt acaattagct ttgaaacatt caccatttta acataattgt ttcatatagc
      601 ttatacgtct tcatttacag gcaaatattc tgttgatctt ttataaacaa agtagcaccc
      661 atctgcttct tgagacactc ctggcgccta ttcattgcaa aaataataca tgtcctaatg
      721 acttccacat attttgaaat ctcccttttg aaattggtct tggcagatta tttgcaggta
      781 cttgagttgc atctgtttgc aattttgcaa atgcggaaga ctttaatgtt gagcactgca
      841 agagggctat tttaatcctc agataacata ggctgtcatc aaaagccaca tttatctttt
      901 cgaaggtggg gcaaatgttt aatgttaaaa gacagtaaaa ggtcaaggtc aaggctgagg
      961 tctgaatatt ttcctttcat aaacttgtgt cttttgtcat ttacttcttg catttctttc
     1021 atttaagttt cagcttagct tcccattgcc aagaggatgt tttgctgata aaaatgaaag
     1081 atcaggaaga gagtaaatct gaaataattg tgaacttcgg tctgttgtac ttattattac
     1141 catgtggtta gcagctgacc aacttaagcc gtttttattt acacgacaaa actgagcagc
     1201 attgtcccag gaaagtacaa cttttctttt attcaatcac tagactatgt taaaatggag
     1261 ttaagggtct cc
//
LOCUS       KCKM01002040            1138 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32096apa ultra-conserved element locus
            uce-5391, sequence.
ACCESSION   KCKM01002040
VERSION     KCKM01002040.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1138)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1138)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1138
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32096apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1138
                     /note="ultra-conserved element locus uce-5391"
BASE COUNT          353 a          233 c          210 g          342 t
ORIGIN      
        1 gaggcgcctg gcagtgatgt ggcacaaaat caaaataact ctacaaatca cgcattttcc
       61 accggatttc aaaatcaaaa taactctgcg atcataattt tcacatgcgt gcagcaaaat
      121 catgacatct ttcccctaag atcaggataa tttatgtacg ggacacaaca tcactgcact
      181 gaggagaagc tccaatctgg ggaagtgaat gggaaaggaa attcatcctg ttttcctctc
      241 ctcaaataaa tgctgtagct gtgaatctat gcaactccag tctttactgt gcaattgaat
      301 gggaagtctc ctgggtgaag agctatctgg tgaatccctc gcagcactga taattatgcc
      361 attctggctg cttacttaat ctatttgaat ccagaggtga gttaagccac ttcctgacca
      421 ttaaagtaaa ctacatgggt aaatactgct gtcactgagg ggtgtgatga agcttaacta
      481 caccaacatc ttaacctcgg ctcggtgcaa ccccagctat tccatcacag ttcataaatg
      541 cgattgcagg tccatctttt gattcagcaa tttaataact tcgagtgctg tcagtactgc
      601 tttgaaaaat ggctcctata aaatgtaaca gcctcaatca gattgtaaaa gattcaccca
      661 ctgaagattc ttccatttca actataatga attaatgttg agctgtgtag aagttcaagt
      721 gtcatttaaa ctaatgtgaa tctactgtaa ctttaaattt taactggact acgaccaaga
      781 atttactggg aacatcacct tcaattttag tgatttttca tggtaaatat gaattgcaga
      841 ttttacttgt tttcttttgt tttaacagca aaaagtcaag taagcaagac agataacatc
      901 atattttttg agacttagct gctattgtga ctttggaaca gtacatttct ataatggagc
      961 actgctatcc aacacaacat ttgcaggaat ttttatgtac ttaaggcaca tgtcacatta
     1021 ttggactgta tgtagcaaca aatcatgttg tcctactaaa tccattctgc ctctcgcccc
     1081 ctctcaaaaa cgggtaaaga gaagggtaag tgttggctga cacggcaaac ataagctg
//
LOCUS       KCKM01002041             574 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32110apa ultra-conserved element locus
            uce-3741, sequence.
ACCESSION   KCKM01002041
VERSION     KCKM01002041.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 574)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 574)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..574
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32110apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>574
                     /note="ultra-conserved element locus uce-3741"
BASE COUNT          200 a          116 c          102 g          156 t
ORIGIN      
        1 aagaaagaaa gacaaatgga tcctattaga gattccctca taatcaaacc tgtcttttcc
       61 ttcatcacat taaagacatg agctacattt gcaaaatata taaagaaaaa tatagggtta
      121 cttgatgacg atatagtact gcagcctgac agctgtctgc aaatattttc accatgatta
      181 tccttactaa aagtaaacca ctgggtaaag atagctcaaa cgtgacaagg ctcaaatagg
      241 atgcaaccaa ctctatcctg aatacttttg gctacatatg gaaaaaagag agatttggga
      301 ctatgattgt tccccccagg ccctcctcca gaagcgtaag accaagcaga gaagcgtgta
      361 ccttccttcc atgcagattt tgttaggaga ctggctttgg gagttagtga ggtagaaatt
      421 aatcagcttt gtcggggaat gaaacaaaaa agcagcatat ttctccttcc aaatactgca
      481 ccaaaagtaa taaatagtac aaaacaacct caattatttc taatcactct aaattctctc
      541 tgtggagctt gtgttttcta caaaccagca aatg
//
LOCUS       KCKM01002042             774 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32126apa ultra-conserved element locus
            uce-4776, sequence.
ACCESSION   KCKM01002042
VERSION     KCKM01002042.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 774)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 774)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..774
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32126apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>774
                     /note="ultra-conserved element locus uce-4776"
BASE COUNT          213 a          155 c          147 g          259 t
ORIGIN      
        1 tcgatctttt tagcactaaa atatgagcca ctttactccc cttctcgatg ctgtgatgtg
       61 aaaaataata actcggatcc aaattaaaaa tattgatctc tggaaggtgt tgaaagtaaa
      121 taaacacctt ccgaagtttt cgggtcagcc aagaaatggt attcagcaat aaatgtgtcg
      181 gcatgtcaga atccagggtt cttgatctgt ttttcctttt gaattgattt ttcattactt
      241 acttcctaaa agtgttggaa tttggtcctc taccgttaaa tcccagtgtt tgggcaaatt
      301 atttctttgg ggcttatgag gtgctcctaa tccactcgct cattgattga ttgatttttg
      361 actcaataaa cttgcattac ccttgcttta tttaagactt ccatcataat tttttgtaca
      421 tttaggcttg acttttttat ttccttctaa cagatgagct gacattggtc tatcaaacat
      481 gtgggaaaac aattgccaca aggttaattt tattgctggc tccatgcatt ttaagtaggt
      541 gccaggtatt ttccactaca ggctgataaa ttgctgctga accactaaag catgagaatg
      601 agtagaagca ctgtaacaac aacaacagga accccatata catgcatcac atagcataag
      661 cattaagcgg attatttttg cttcatcagt ttgacttcgt tttgcatctg accagaggca
      721 ggtgtgcagg aacgcaatga gctccttacc cgttccggct gcgcgctgat gctg
//
LOCUS       KCKM01002043             771 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32142apa ultra-conserved element locus
            uce-6103, sequence.
ACCESSION   KCKM01002043
VERSION     KCKM01002043.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 771)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 771)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..771
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32142apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>771
                     /note="ultra-conserved element locus uce-6103"
BASE COUNT          248 a          164 c          142 g          217 t
ORIGIN      
        1 aaagtgaagc aatgctcttc atgattgcaa tggacattaa aaaacctaag agcagctcaa
       61 aagagaaaac aaaatgtgac atattttatg gagtcctgaa gtcctccagg tcctcagaat
      121 gaacttggag ggtggagtca tgccctgttt tttaaattgt ccctcataat aaatattgca
      181 ttacaaggaa caattaattg tatagattag tctaacttca tcaattttat ggccatttta
      241 ttgctatttc ttacagctct gtgaagaaca gccctcctct tccatccttg tgtttaaagg
      301 gttaaatgag atgagtgaca gcctttctgc atgatttaca acttcgagcc ctgtagtgaa
      361 accagcgctt gatggatgat cctgaaagac ggagactaac cataaatcat gtctttgaat
      421 cattgacaaa gataaaggag agaaagaaaa agcactggca ttgacattca ttctcccaat
      481 aatgtacatt gactagttac aatacagaac cttaattaaa aaagcgaact caaatagtca
      541 cctcagtgta gggaacgctc tgctctggaa ggctcatgaa aatcacaaat aaaagttcaa
      601 gccacatttc tccctgggaa aagccctcag atgtgctctt gccacagccc cgcaccggaa
      661 agaaaactcg ataaaccctg gtcttaacct ccttgttatt taggacctag ctttcttttt
      721 ggccctgttc gtaacttcat cttattatcg ctagagctaa acgcctaggc a
//
LOCUS       KCKM01002044             876 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32158apa ultra-conserved element locus
            uce-6693, sequence.
ACCESSION   KCKM01002044
VERSION     KCKM01002044.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 876)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 876)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..876
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32158apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>876
                     /note="ultra-conserved element locus uce-6693"
BASE COUNT          283 a          174 c          193 g          226 t
ORIGIN      
        1 ctctatggag gaataaagag aatagtggga aaatgccaaa agattattag cttagccaaa
       61 gattacacat ttgcactagt aattaaagta ttttgcattg gatgcaggct ttggcaagtg
      121 ccactgacaa aagatttcac acatgcaagc atgcgtgcaa gtacacgaga tctttctcac
      181 atgcacacac acagacagag gcaaacagaa agaatgaaat aacccattaa gaaatatttc
      241 cgcataatgc aattattaca gctgtataat tgaatgggga aaccattgat ctgtagtaga
      301 aaggaaattg ctcttttcat tgtgttccta tgaatatgtg aacattaatc tcaatctata
      361 atcaacgttc atttcaaatc tgattgcgtg ccactaaaca cccgtagcta tgctaacatt
      421 atgttaatac ggttcaacat catagctccc agcttcacag cacaaatatt tttctttggc
      481 aatcaatagt aatttcagct gagtggatgg aagtcacgtt ttaatggtaa tctttcctcc
      541 aagcctccaa gtggaaactc gactggtacc ttaacacgac ggcagtgcat tgcatgtaat
      601 cagataaatt aacctaaaag agagagagag aaaacacaga tcagaaataa aaagcggcgc
      661 caagaagctc tacattttcc tgatagatta aagtgctcat taccatgaga gagagagtgg
      721 atttcaagag gaggaactga attcccttgg ctttgagccg tggctgtaga gacggcgggt
      781 cacggtgtgg ggtgcctccg acaacggggg aacatggcaa ttcagtgagg gctgacccag
      841 gctctgcttc ctggagcctg gctggcctct gggcat
//
LOCUS       KCKM01002045             655 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32174apa ultra-conserved element locus
            uce-7656, sequence.
ACCESSION   KCKM01002045
VERSION     KCKM01002045.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 655)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 655)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..655
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32174apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>655
                     /note="ultra-conserved element locus uce-7656"
BASE COUNT          181 a          131 c          154 g          189 t
ORIGIN      
        1 ttattttaat taatcgggat tttgttgtca ggctaaacca gactaaaaat aaacagctgt
       61 atagtacttc attaagctgc ctgcttggag tgattttccc attgattagt ctcagggcta
      121 atgctggttc attcctcatt tcattgctaa ttaacatcag ctctgctcat gaccacttga
      181 ccgcactcag tctgtgaaca tgtgctggtt tggcaagtaa taactgcttc ctcctcctta
      241 aaagagagaa ttaagggaga gaatagctat caagtgtaga tctctggctg attctactgt
      301 aaggagagca aactgtaaaa ccgtatcggc ccgtacgaat ggtaataaac atggtttaca
      361 gagcgcagga gtttgattga ggaactatgt aaatacagat gatgagctca agctgctgta
      421 tgaattgaca ggcttggctc gtctcctgtc agtcgagttg attcagtctc ttctgggaca
      481 atcgcggtgc agattacctg acccaggggc ttacggctgc tggccatcag ggagaaggct
      541 gcttaggatg gacagcactt gcttttctaa gtctccacaa tgttcttgga gtccaaataa
      601 ttaaatatgt tggcgacggg tacagcaaga gcaggaaaca taatgccaca gttat
//
LOCUS       KCKM01002046             992 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32189apa ultra-conserved element locus
            uce-3239, sequence.
ACCESSION   KCKM01002046
VERSION     KCKM01002046.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 992)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 992)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..992
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32189apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>992
                     /note="ultra-conserved element locus uce-3239"
BASE COUNT          267 a          188 c          214 g          323 t
ORIGIN      
        1 cctgctgctt gggaccctgc agttgtttag agaaatatgt actcccttga aggacataaa
       61 gcacagattt gttttcggtg gaagtgtctc acttttgaaa ctactttccc caaattaact
      121 ttcctctcag ttttcctact tttattcttc acacgaggtt tgaaaatggc ttttcctatg
      181 gactggtttt tgtgttctgg atgttaaaca aagaaatgct tttgccaata aaaccattat
      241 atgcaagtag ccttctaatc tcttaatttt gattgtttct tcgttacctt acaagataca
      301 tatttcttct ctctttagga tatctcttgt cagatttaag gcttatttaa aatgaacaga
      361 aaactgaagc aattttcttt attccatttc agtctcctaa ggcctatttc cccctggtga
      421 gctcatagca acaggggggt ttaagggaat tcagctttct gcaaattaat gtctcacatc
      481 atgaaaattc aggacttttt tttttcctat atcttgaaaa agtaatacag tgagtgcgag
      541 tattatttct tgccagcggg tggaagatga atgattttgt cacagtttta ctgcttgatg
      601 agcagtgtcc tgagggtcag gcttaagtct gtgtcactat gctgctcatt actcttgagc
      661 taaataaggg ctgattggat ctaaattgcc tagcacatgg gccacagatg agctcagtga
      721 gtaggggatg acctgctatt caggctggga gtaaccccgg tgtgcaaatg ctgcattaga
      781 acaccgtggg agaatgagag gctaccgacc gctgccagca aaagaaatcg aaatgtaaaa
      841 actctttgat gctgcaatgt tagaatttga aatgtaggaa gtgacaggtt gatggtactt
      901 atcagctttg gctggattag agaacagtgt catcttgctt atataatgac agaagaatga
      961 agctagcgcc caactccttt gcggtgccgg gc
//
LOCUS       KCKM01002047             767 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32204apa ultra-conserved element locus
            uce-718, sequence.
ACCESSION   KCKM01002047
VERSION     KCKM01002047.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 767)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 767)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..767
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32204apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>767
                     /note="ultra-conserved element locus uce-718"
BASE COUNT          225 a          138 c          149 g          255 t
ORIGIN      
        1 atagagtgaa agtctctcta gagggtaatt attctttggc cgcttaggga agaagtcccc
       61 tgtcactgtt aaggttaata ttaaggtagc tccgctatac tttctcatat taaaaaaaaa
      121 aatcctcctc agaatgttat actattaatt gccaatttgc atatgtgtgc agctgctgtt
      181 ttggctccga tcttccatcc gataagcttg ctggaggtat cacagagcac ttggcagctt
      241 tcctatttga aaagaaagcc ttcctaacta cagaacagct gatagtctat cagtgataga
      301 ccctgatggc gtgaattaca attacactac ttttcacact aaatctgggt gatagctact
      361 tggaaagaag tttcatcatt ttttaccaca aactggaaaa agaattacat ggtcatgctg
      421 tgcttttaaa ggcagtttgg ttcacttttg tctatttaac acctaattcc gaggagtcca
      481 taggcatctg gagatctgaa cgtcgcgtaa tgaattcact gtttagatgg gagatttttt
      541 aaatctacct caaattacat ttattaacaa ggcgagcagg aagtgttaga gttgttagac
      601 gcttcattta ttaaataatt tgtgggtatt ttcagttgtc atattcagag tcatgggggt
      661 ttacttattt tttaattagc aattccaaaa caatgctact gcaatttaac aattcatcac
      721 gtaatctggg gctgttcagt tcaggcacta atgctggata attcaga
//
LOCUS       KCKM01002048            1074 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32220apa ultra-conserved element locus
            uce-4347, sequence.
ACCESSION   KCKM01002048
VERSION     KCKM01002048.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1074)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1074)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1074
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32220apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1074
                     /note="ultra-conserved element locus uce-4347"
BASE COUNT          276 a          292 c          263 g          243 t
ORIGIN      
        1 ggagcagagc tggaaagcag ggcacgggca gagaagacaa atgggcagag tgggtcgtat
       61 atgagatgga agagaagaaa actgtaatcc atttagctag atgaggaaag acagatcaat
      121 agatatgaac tgcaaagcaa tggggactga ctgaggacaa ctgtgtaact tatcccacct
      181 agcgacatcg ctcagattaa tgttcccatc gctcgacgca attcttccca aagctgaagc
      241 caaagcaact ctcccctgag caaatcttca ccagcagctg tgggctcctc tctccagcag
      301 aggtgcacat cctgcgaccc atctcagcct ccccatcccc gttcctcccc ctgctccgca
      361 gcagcaggag ggacccagca gctcaacacc aagactccca tcgccccaaa gccacgatcc
      421 cgagagcctc gcgacacgcc gagaaaggaa gaaaatgcag aacccagccc ctccctgctc
      481 ccaacttaca tttaaaggct ttaggtgagg tttcgctagt ctgaatcttt ggggcaagca
      541 tgcgtttgcc aaaaacctga gcatcaaaac ttgcataatc gaaggtgacc ttggagtact
      601 tctccagctc cttggccagg ttggcccggg gggttgctgg gaccatgttg ggccggtaac
      661 ttccatactg agggatgtcc agttgcttca caaagcacat aggcctgagg atgaaacaac
      721 gagcaacagt gatttttctt ttcctcaaca agatggccat tgggaggggc tggacatgtt
      781 ggggatgcgt agctgcaccc tgtccccaag gggctactgg tgaagaggag gcagcaacag
      841 ctctttcggt ctccctcaac aagcctgcat ctgggtctct tagattcctt tttatttttt
      901 ctcctttttt taactttttt ctcttttcct cttttttaag caaaacacca aggtgtcaac
      961 cccatccacc tcaatattct cgcaggttgc tgcatcgtgg cagcatttcc taagaggagg
     1021 agaaatcctg gcatcgctca cttaggggac cctgtcagag gagggcacag aagg
//
LOCUS       KCKM01002049             931 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32235apa ultra-conserved element locus
            uce-712, sequence.
ACCESSION   KCKM01002049
VERSION     KCKM01002049.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 931)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 931)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..931
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32235apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>931
                     /note="ultra-conserved element locus uce-712"
BASE COUNT          319 a          161 c          186 g          265 t
ORIGIN      
        1 tttaaatttg gctttcaatt actttgcaag cagagcagcc ggatacagtg gagctaatga
       61 catgtagaaa ggcagaggtg ctgtggagtg caagaaaact gttgcttaac tttcaggaaa
      121 caactctgaa taacaaaaaa tgagtgctgc agatccgtgt agcataagat cataaagatg
      181 atactttgcc cctaaaaaat aaataaatag gcaaagcagt gccacaaatg tgttccgaaa
      241 attcacagag agtatccgtg tttgttttaa cttgccacta caaaagaaga ggcagggaac
      301 aatagtgagg tccagctgtt gtttttcttg aagaagtccc agctccccat acagagaaac
      361 tacacttgag atgagctggc tgagacaaat gttctgtcta cactttaaat ggcagctggt
      421 tattaaatga ctcccaatag gatgaacact tgctattgac aataaggtaa tataaggacc
      481 atgcagagca atcaggacgg gaatgtgaat gaaaaatctt taatctgaaa ttacagctgt
      541 cagggttata ttataaaaca tgaaagttgc atctgcactt agaattaatg tgtcccaaaa
      601 gccaagtttc tcataaagtg catcttgcag atacatcttt tataaataga ctactggtct
      661 ttcataaatc aaaccgaact gtagcctata ctaaggaatt aaaagggtca tctcttctgg
      721 ggttggtatt tgctgaatag tatttgggaa aaatgaacat tgatttacaa agtccagcag
      781 atgctggtag tagtattact ttctaacaat attcactgac ttcaatgtgt caaacaaatg
      841 acttcagttc tttcattacc agcctcagca tgtagaagca tctttttcaa aataagagag
      901 catttttgaa agagctgctg tttaacaatc t
//
LOCUS       KCKM01002050             915 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32249apa ultra-conserved element locus
            uce-4887, sequence.
ACCESSION   KCKM01002050
VERSION     KCKM01002050.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 915)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 915)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..915
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32249apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>915
                     /note="ultra-conserved element locus uce-4887"
BASE COUNT          278 a          193 c          203 g          241 t
ORIGIN      
        1 atatttgtag cgcttattta aaaacaaata aagtttgcaa ggcagatcag gctgcagcat
       61 tcatagcact gatagtaagc tcacagccct tagaatcaca tacttcacac aaagtcactc
      121 agagaaaaat tttctacaat atcttcaggc aacaaaggac atttctggcc atcgtgcgaa
      181 ttctgtgtga ctcaaactct gatacaaacc caggattttc ttctttgtac taggtatggg
      241 aaagcccgct cctttgagag ttaaaatagc tttcgaagac ttctgattta aatttcaaac
      301 tcttgatcat agtcagggag taaatgtttt tatcctgaaa ttgaaaattg ggttctttag
      361 ctctataccg agtgaaaata ttaagcattt tgttgtatcc actatgtgag ccaagttccc
      421 cactgtgccc tcaaatccac agtgaatgaa ccatatttgg atctgcttat cagaaggaga
      481 catttaggaa gacaatgagc ctgtcctgct agacggagac tcctgatgct tttagatagg
      541 cctgcggtga gctgcaaaat gggccctaaa atcaggctga catggtcgct taacaagccg
      601 tggtattagc tgttggctca gagaatttct agtgtcaccc acagggctga tgatggcagc
      661 catcataatg agaatgcacg aatcaaaaac accaggtgaa gattttgcct tggaagaaag
      721 aaaagacaga aggagggaat taccatgccc cttgactatt aagctgctgc gtgcagctgg
      781 atcagtgacc aacagtgact gggcggatta tgctctgggg atactcgcta tagcctcgca
      841 cttcccacac ccagtggctg tcaaagccaa cgctgtgaat gacttcaaag aaagtgaagc
      901 aagaggctac atggg
//
LOCUS       KCKM01002051            1168 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32280apa ultra-conserved element locus
            uce-5158, sequence.
ACCESSION   KCKM01002051
VERSION     KCKM01002051.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1168)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1168)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1168
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32280apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1168
                     /note="ultra-conserved element locus uce-5158"
BASE COUNT          322 a          224 c          255 g          367 t
ORIGIN      
        1 tgactaagtg agatttataa agctcatcac attgtatttt tttttctttc ttcaagtagt
       61 gccaaaggac ggtttaacct tccaccacta ccgctaccat cacaaccttt agacttatta
      121 atactttcat tcatgtttct gtgtaccagt gctgataacg ataccatctg gggaagagga
      181 cttgacttta ctcgtgtgtt ctgtttagta gcagacttgt gataaagctc atgtttgttt
      241 agactgtgct agagcagtac agtttcagaa ctgtcttcac tcactgacag aggctttctg
      301 agaaagcgaa tttgcaattg aactgttatg cgggatacta gcttctggta gagctatcag
      361 cactgggtct tgaactaaga tctgtttagc cttccagtat acacaggcaa tcttgatggc
      421 cttcagacta gagattttga tgcctacgta gagttctatt aaaataatca ggtactctgt
      481 agctttgcaa ccctcttgtc ttacagatgt ggttaggtgt tgatgtacca aatcaaggta
      541 gtaaacagtc caagatgcag ttggaggcca tcctgccctg ccctatgctc tgtgaactga
      601 cctagctagg ccttgttcct ctatctgtga atgcgtgact catcgatatg ggcgtttgtg
      661 ttgggcccat accaaccttg tttagtccca cagtgtttcg ttcgccccac ggaagcaaag
      721 aaagcagcag atgaagccaa gatgagattt gcccacatag atggagatca tttgacgttg
      781 ctgaatgtct accacgcttt caaacaaagt gagtgtgcgc ctgctttagc aaaattataa
      841 tgctttgtgc tgctatcttt cgttcctgag ttgcaaggac aattgaaagg cctgggcttg
      901 ttttttgagc tgtttcttta taatcttaac aaagtatgtg aatttaagta ctgcgttcct
      961 ttggggagtg gggaataaaa ctgaaaagag agccaagaga taatgtaata aactgatgag
     1021 tatgaagaca agccaggctt taaatcactg ctgggtaacc ttggacagaa ggaagtacac
     1081 actcctataa ttaagaaata ttggaagttt gttatccgag attaattata gaaaattcta
     1141 cgtaattgct tagtaatttt tcaaggag
//
LOCUS       KCKM01002052             554 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32295apa ultra-conserved element locus
            uce-6881, sequence.
ACCESSION   KCKM01002052
VERSION     KCKM01002052.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 554)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 554)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32295apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>554
                     /note="ultra-conserved element locus uce-6881"
BASE COUNT          179 a          105 c           85 g          185 t
ORIGIN      
        1 aaaaagaact gaacgtatat atgggctgca acatttagca atctcgaatg acatctgagt
       61 aatgttgatt ttgtttagat gacaacctca ttatggtgca taattgcgaa gcaatctcct
      121 agtaaacact gggttaaaaa ctactggaag atgcttgttc ctcttgttat taattagtat
      181 gtgtccactc cgccagatcc acagcccaaa cttcatttgt tatgttcagc caaatgcatg
      241 agtagctttt gagtaattat tttccaacat catctaatac ctctctgcac atcaattaaa
      301 aatcctctta acaaggaact gcattttgtt tgagatcaaa tgcctagtcc aaagctgtat
      361 caatcatgta gagctaatta gtgggtctgc tttatatcat ttgttttact ttattattct
      421 attatacact tcctaatgaa accaattgaa caatttttaa atctttgttc aattaattga
      481 aggcttaaag gccagctacc taggcaggct tttcctgctt taaaaagcat acatgtaaag
      541 aaaaaaaaaa tccc
//
LOCUS       KCKM01002053             644 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32311apa ultra-conserved element locus
            uce-4300, sequence.
ACCESSION   KCKM01002053
VERSION     KCKM01002053.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 644)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 644)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..644
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32311apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>644
                     /note="ultra-conserved element locus uce-4300"
BASE COUNT          202 a          115 c          158 g          169 t
ORIGIN      
        1 ttgcctgtgg ttggaacact aaatgcctga atattcactt tccataaatg ttgggcaaaa
       61 tattctgtgt gtataaggta caaaactgtt taaaagcaat tcagtaacat gcctgttgct
      121 gtctatttgg aagtgtttgt tgcagcgcaa cccttctaat ccttgtgttt gcattttgta
      181 gtcgtcaaca agaaattgaa gagaaactca tagaggaaga aactgctcga agagtggaag
      241 agcttgtggc gaaacgtgta gaagaagagt tggagaaaag gaaggatgag attgagcgag
      301 aggttctgcg cagggtggag gaggctaagc gcatcatgga aaaacagttg ctcgaagaac
      361 tcgagcgaca gcgacaagct gaacttgcag cacaaaaagc cagagaggta acgctcggtc
      421 gtttggaaag tagagacagt ccatggcaaa actttcagtg tcgtttgtgc ctcctgttcg
      481 gttcagaaag agatggaata cagcaaatct aattcccttc tcatataaac ttgcattgct
      541 gcgaaaccta atttctagac tattcagagg agctcactgg tacttaaaca gttactctcc
      601 taaaacctga acaaggatag ttgattttta atggaactga ccta
//
LOCUS       KCKM01002054             635 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32326apa ultra-conserved element locus
            uce-7036, sequence.
ACCESSION   KCKM01002054
VERSION     KCKM01002054.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 635)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 635)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..635
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32326apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>635
                     /note="ultra-conserved element locus uce-7036"
BASE COUNT          213 a           95 c          135 g          192 t
ORIGIN      
        1 agggttgaag gttttataga agaacttcta ctgggatttt tttttccttc tgctttaaaa
       61 gaaatttgtt tactaccagt ctttgaaaag cataaaaggg aggaaactat agggtaaaga
      121 agtaaaactt ttacgtgtaa ggaacacttg gagctttgtg agaaggctgg ttttggtaga
      181 atgtgtgaca tgtagcccaa tgtgagtaat attatatctc aaataaaaat cagcccatga
      241 atatacataa tccaaaaggt aattctccca atctctgaaa tgtaatggag ccactccaga
      301 tcactgaggc atgaatattt accgtattca ggctttactg ctctcgatct gggttcaatt
      361 ttgcaaatta aaatgaaggc tctgtggata gagagattaa agaagagcat cccaaagcct
      421 gcctgtttcc ttggtgtggt agcagtgatc tggttaccct tctgttaggt tatttctttt
      481 tacttaatgg agtaggtcaa aagcaactga gagtggaaag aagaggtcat tattgggtca
      541 caaccttgga gttaaaggct cactaaggaa aataaacaca gagtgaacat aaagctgcat
      601 ttaaaaataa aacttgcaat gaaaaataat atttt
//
LOCUS       KCKM01002055             279 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32341apa ultra-conserved element locus
            uce-5856, sequence.
ACCESSION   KCKM01002055
VERSION     KCKM01002055.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 279)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 279)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32341apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>279
                     /note="ultra-conserved element locus uce-5856"
BASE COUNT           83 a           30 c           49 g          117 t
ORIGIN      
        1 gtatattaaa tagctgtaat gtagctacaa gaagcttgac taattgaggt gtgagttctg
       61 attcaaatct ttttcatgat gattttaaaa aaaaattgga ttttaaaggt attaaagtat
      121 ttttgttttg tacaagagtt tgttgctctg tataactcct gtatgcattg tatattgcaa
      181 tttattactg tcagagattt gtagacagtt tcttattttc atattgaatc atgttacttt
      241 tgtaattcag gtaaacagct gggttaattc atgtttacc
//
LOCUS       KCKM01002056             905 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32355apa ultra-conserved element locus
            uce-5821, sequence.
ACCESSION   KCKM01002056
VERSION     KCKM01002056.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 905)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 905)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..905
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32355apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>905
                     /note="ultra-conserved element locus uce-5821"
BASE COUNT          316 a          165 c          172 g          252 t
ORIGIN      
        1 aaattaaatg agaagacttg caagccatgg aagattaaca agaaattggc tattttttca
       61 ttattaaggt gaagccatta gctcaagtag atttagttac taagaagtcc acatgtcagg
      121 ttaactacga aaagctatcc aggccatttt catccaatga gttaatttaa gagcagactt
      181 tttggaagta tgcactaaat ttgagaaaga cacttgtgct acaagatacc tgcatttaaa
      241 tttagccctt aagtgattac atggaattgt tacaagtcaa cagtaagtgg tttataaaat
      301 gtaattttat ttaatgttac tttgctgtta cagagggcat aacattttca caaggctttt
      361 ttgggactac aatcaatgat tagcaacaca caatagtggt ccaaactctc taagtaacaa
      421 tcactggaca aactcgacac cttctcacat gtgcacaaac ctgcatggaa aagtacttat
      481 acttggacat gtgaacttca attggttttc ccattccagt gtattaagaa atgacatgca
      541 cttgagtctg ccaaaaagca ctgcctgtac cccggcagta acatgctgct tctaatacat
      601 agtaaagtga ataccagaac tacgaaggca ggagtgtaag tgaactttta ttgggaaggg
      661 catcaactta aacagcagca actgaagata agagaagccc ctggttttga acacgcaagc
      721 ttctgtatta caggttacag gaagcaattc aaaatttgtc attttccaaa ctagaaatgc
      781 tcaactcgat ctggcccaat acttccgtat tcctactgaa aaaaatacac tgtagcatgt
      841 gaaagtcaat tatggagagg aaaccctgca gaataagaag ggaatgtgga gaattaaaag
      901 ccatg
//
LOCUS       KCKM01002057             876 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32371apa ultra-conserved element locus
            uce-4944, sequence.
ACCESSION   KCKM01002057
VERSION     KCKM01002057.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 876)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 876)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..876
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32371apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>876
                     /note="ultra-conserved element locus uce-4944"
BASE COUNT          232 a          159 c          172 g          313 t
ORIGIN      
        1 tcacagaaga acgctgtgcc cgttgaaatg cttaacttgt atcttgcaga gttaggctgt
       61 ggttttcttt agtaggtatt ggtaatatat ctggtcagaa aaataaagct catggtgaag
      121 tgcaagcttt ctgtcaggac ttttctttta acagatcact cagtgttaca ggctggcaaa
      181 ctgcatagcc atttgcatct tggagaaaga tgcaggcttg cccttttctg ttattctgag
      241 aaaatgttca gttgaaattg catcagatca cttaatattg cagtttgata tagtgtcttt
      301 ttgtgccatt gagccaggac ttcggaacat aattgcccag cagtattgat ttaattgcct
      361 aggtttattt gtggactcct aattattgac tggaggtaaa tttaatggag aaacctttat
      421 gaacactggg aactgccgct gctgctgtta cacataatga actgcatcat atccctttag
      481 atcattcttc aagctaattt tattccactg tgacagtacg atagcattta aaatgtcata
      541 gacattttgt ttttattact gacatattcc attttactgc tgcattagaa tttttggggg
      601 gactggggga agcactagtt gctttttact gtcttttcat agagtgccct aaagcctaat
      661 gataaagggt agcacacctc tgttttgcac ttcacctgta tctttatttt ctgtactctt
      721 atgacttgaa gatgtctaat ttctgtcagc tttacaagaa tgttagtatt tcagtgataa
      781 atatttttgc attctggagg ctcacagact ccatttagag tttgtgtcct tgttttatca
      841 actactatag caactcatgc agtgaagcta caccac
//
LOCUS       KCKM01002058             521 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32387apa ultra-conserved element locus
            uce-2565, sequence.
ACCESSION   KCKM01002058
VERSION     KCKM01002058.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 521)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 521)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..521
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32387apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>521
                     /note="ultra-conserved element locus uce-2565"
BASE COUNT          152 a           92 c           91 g          186 t
ORIGIN      
        1 gcaactgtct cctgtcaact aatttgatag ttctctatca ggtaaaccat ttgtgaatac
       61 attgattctt tttatttttc actgttctgt cttcactatt cccaggtttt ctctgaacca
      121 gttgggctaa aattgatttt tatttgttcc accggccttg tggaaaatta gcttatgaac
      181 tggtttttat aggaagactc aaagcacaga acaggttgaa aaataagcct atagcagtca
      241 aaattgttgt ctgaaatgtc ttcagactgg aaggctgaat ttattgctca aaacaagtac
      301 tagcattgtg gaggtgtgca gtcctgctca ttatcactgg aaaaggggga accaaaaagc
      361 acagtaaaaa attaaatttt aataatgcta gtgatatttt ctaaatcctt cttgacagaa
      421 agattctcat tatttttatc tgtctcagag taggctcttt taatgccatc tcacaaatgg
      481 ccttagccat gattgttttc ctttctttta tagcatttga a
//
LOCUS       KCKM01002059             786 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32402apa ultra-conserved element locus
            uce-4066, sequence.
ACCESSION   KCKM01002059
VERSION     KCKM01002059.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 786)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 786)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..786
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32402apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>786
                     /note="ultra-conserved element locus uce-4066"
BASE COUNT          263 a          134 c          125 g          264 t
ORIGIN      
        1 ttcatatata cactgatata aagtgaagca tttatgctca catacaatta atgcttacag
       61 cttttagata gctatttttc ccagcacagt gtatattttt tcacttgccc taattataat
      121 caaaatagcc cacatatcct cagtgacagg taagatacac aaagtgaaag ttactgaaaa
      181 aatatcatga tttagcatat tatattttct aagcaagcta agaaaaaaaa atttgctctt
      241 cttggatgaa tgtcactaat ggaagtgcaa cacagcatct tggctaccta cgtaagtgat
      301 taattaaaat agttaatcaa gataaacttc tgcacctagc taacagagga ctgaaagttt
      361 atcatgtcta aatatgtttc tcatacattt actgcaaatt agtttttgaa agtgaatttc
      421 aaggtctact gactccgagg ttcactaact cagatttcat taagttttca caaatgatct
      481 actgtagcat tattctttta tagtggtgca gatttaaggc ccactatgaa aagcaattat
      541 actgtcagaa aagtgtattt tgacttatta aaaaattgaa aggtttcata aaactattta
      601 ttttgatgtt cattgggagt gcatgttgac agtgttaggg aagaaagcac ttttctgggg
      661 catatctctt gccgtcctct catcatacct tcttgttgaa gacttgagac aaccttacct
      721 accagataca ttaaaaacct gtgtaggcaa taaatatgag gtactttatg attctgccct
      781 gtaact
//
LOCUS       KCKM01002060             760 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32418apa ultra-conserved element locus
            uce-1562, sequence.
ACCESSION   KCKM01002060
VERSION     KCKM01002060.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 760)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 760)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..760
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32418apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>760
                     /note="ultra-conserved element locus uce-1562"
BASE COUNT          292 a          133 c          118 g          217 t
ORIGIN      
        1 atgcaaataa ttctgttcca actgcctctt tacattagct aaatgaagtc atcagtaaac
       61 aaaattggaa gaaatcttaa cacaactgct gtaaacaact ttaaaagttt tacatcccca
      121 aagattaaaa ttgctagaag acagttcaga ttaactggag atgttcaaca ctgatcaagt
      181 ttatagtaaa aaaataatct ctcttatctc acccaaactg atactggtca cagcaaatta
      241 taatcaaaga tagatttctt ggagggtgat aatgccatta gatttaagga attaaaaata
      301 catgaaactt ttgagttaat gaacagggtc cttaactgct catttaattc aaacagctgt
      361 ttgttaatgc cctaagcagt gtcataaact gtgaaaatac tgttgagtgc aagacactag
      421 ttaatgctat aaagcaacac atgctctaat attaaaagga tttaatggga ttaatagaga
      481 ataaaacatt aactccctat tatgatgttt ttaggaccca agggcaaatt ctggataaaa
      541 aggactccgg ttctaaaagc acaaaaagta aactatagca ctgtacagca aatcatggca
      601 attttatgct cctgaaaaaa agtggaaccc tgataagatc acatctgttc caatcacaga
      661 ctggataaaa tcactgttta ctaaagtcct aaataactaa atatgtggaa ccccaacaag
      721 atcccatctg ttaagattac aatttggata aggtcccatt
//
LOCUS       KCKM01002061             373 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32433apa ultra-conserved element locus
            uce-3110, sequence.
ACCESSION   KCKM01002061
VERSION     KCKM01002061.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 373)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 373)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32433apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>373
                     /note="ultra-conserved element locus uce-3110"
BASE COUNT          116 a           64 c           72 g          121 t
ORIGIN      
        1 tccgtggtag gatgctagag ttgcatacta aagatagcag acacatgctt catggaagta
       61 gcactactgg aatataaaca agcccccttc gtccagacat ttttggttat gtttacagat
      121 taaatctcag gatgtgtata ttagatgttc ttgtttcagg atattaatgg caaaatgaac
      181 ctgtttttga tgtttaagtc acattaatgt ctgatggact gttaaaatgt taaagggtac
      241 accagacatg ctgtagtatg tgacatatgt tagtcatacc atactagctg ggaatttgga
      301 tttgtttata atgaacataa attgactgaa tttaaccccc ctctgcctcc cccaaaagtt
      361 aaatcacatt aag
//
LOCUS       KCKM01002062             783 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32447apa ultra-conserved element locus
            uce-2386, sequence.
ACCESSION   KCKM01002062
VERSION     KCKM01002062.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 783)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 783)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..783
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32447apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>783
                     /note="ultra-conserved element locus uce-2386"
BASE COUNT          276 a          164 c          107 g          236 t
ORIGIN      
        1 cactcccacc ttttttcaat tattactatt ttttacaagt ctccgccact tcggcctctc
       61 tgacacagac tatcttcatg cctcttctca gaaggaagtt aaaaaaacag acaaaaacta
      121 ccaaatctca acgctgcttc tcagcacata ataaaatgca tgaagaacac agcttgcaga
      181 tattctgccg gctacctata gtcaaaagcc ttgtttctta cacaacaatc ttcaagaaaa
      241 tataaattca ttatttggag tgttgagaat atcttgcacg ttgaactaaa atcacctacg
      301 cacatgtaaa aaaaaattaa tatttagaat gaacgaagca tatcattcca cctcactcta
      361 attcatcaca cctcacctgc ttgccaacat tttttattgc cagctgttca ggtgtcatct
      421 tatcttcttc ttcaacagcc tgtgaaagaa acacaggaaa ggtcagtgtt tcagatttca
      481 tttacttttt ccccaagcca gaagattctc aaaatataat tataaaatca aacagcaaca
      541 catttcagaa tgtcaaaagg aaaggtactt cagcttttca gcagacatgg ttttaattac
      601 taagtgttag tgcaaaagat caagacaaac acttatgaat ggttttattg ttggatattc
      661 acaaaaaaac cttaaacgag caggttaaag acagctaaac caaaaagcag aaccaaaaat
      721 aatgttacct acattgtttc aactactgga ggtttgattt ttatactgtt tgaagtaatt
      781 tat
//
LOCUS       KCKM01002063             833 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32462apa ultra-conserved element locus
            uce-1383, sequence.
ACCESSION   KCKM01002063
VERSION     KCKM01002063.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 833)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 833)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..833
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32462apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>833
                     /note="ultra-conserved element locus uce-1383"
BASE COUNT          235 a          141 c          176 g          281 t
ORIGIN      
        1 cattaaaagt tctgtgcctt cctgttagct cagcgttgcc catatgacac tgatttacat
       61 gcttgtttac agtgtatgag gaacaataaa atgaacatac tggcaagctt ctcattttta
      121 tggtgccagt tgttatgcta gcatcgtttt caatttactt acctttgcgc agtcttctta
      181 tctggtgcta atagttttaa tcacttaaag ttttcaacat gtgggagacc ccaccaaata
      241 cgaattttgg ggaagtagaa ataaaaagcg agagtgagag agagagaaag agctgaaaca
      301 tttggagctg agcatgctgt ccctgtttgc tatgtaaagt atgcctcatt tctttgatct
      361 tgagtaataa taattctggg gagttatact gttttcatat gcttcaaagc tgtgtcaaag
      421 ttttgctgct taagggtact tctttattct attggctctt gggtactgag atgacaggtc
      481 ctctgtacta ggtgcaggct ttttcaagtc atagccttca gcaaaacatc aaattaccaa
      541 atacagggta acatacttct acacaaatgc ctttcctgta gatatattat accatatata
      601 ttaaatactt tagtgttaca cggtacattt tatgtgcaat agaaagtgat ggtttgaggt
      661 agccttaggg gtactttttt ccacaagcag aaaaagctag tgtataccgt atcaagtatg
      721 gtttttacag gactttctgc ccgaaggcct ttgtaaataa gtaatgatca acagattggc
      781 tgtgggtttt tgaaaagcat gcctgtgtca gtttgcatga tgggggaaga ttt
//
LOCUS       KCKM01002064             762 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32478apa ultra-conserved element locus
            uce-3720, sequence.
ACCESSION   KCKM01002064
VERSION     KCKM01002064.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 762)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 762)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..762
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32478apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>762
                     /note="ultra-conserved element locus uce-3720"
BASE COUNT          251 a          119 c          143 g          249 t
ORIGIN      
        1 tgaacaggtt atttacaata aggaaaatga gtgtttaact aggtgctgta acaagacatg
       61 caacagaaag gcaaatgatg aagcagctta atgtagctgt aaactttggt ttaatagatc
      121 tttgactaac ccaggttatg acacataatt taacatatat gtatcccaat tcagtgaaaa
      181 cctctttcag taacatgtta aatagtaccc atttatgcag gctttcccat taaagtaatt
      241 ataattataa gaacagaaag aaagtttatt cttctttata gtgaaaacaa atgtgttttt
      301 ctccagaatc tgccaagcct gtgttttaat gatttaacag atggagttgg cacatgtgaa
      361 cctggaagat gcatctgtct gatttttcca gtctgagggt tttttaactg cattaatggc
      421 acagacgatg gtaaaatatc acctccccag gctgctttgc tctcctaaca cataatgtct
      481 tttaaggaga aaaaaaaagt gataggagac tggggtgagg aaaaggccag agaaatgagg
      541 atttgaaaag tttagtattt tctgtcatca ctgcattaga cttttaagcc ttttgcttcg
      601 aatttcatgt ggatatggtg tggaaacaaa aattttaccc aggtagtatt atctgtgacc
      661 tcggggtttt attaattgcc ctaaataaac ataatttaaa tatgtagacc aataaccact
      721 agtttttcat tctctgtaat ttaaatggtt gcacattgca tt
//
LOCUS       KCKM01002065             252 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32494apa ultra-conserved element locus
            uce-5311, sequence.
ACCESSION   KCKM01002065
VERSION     KCKM01002065.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 252)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 252)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32494apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>252
                     /note="ultra-conserved element locus uce-5311"
BASE COUNT           95 a           35 c           40 g           82 t
ORIGIN      
        1 ttagaataat tatgtgttgt taattgaaga atgttaatca tgtcatatta ggaggaagac
       61 agggttaaac tggtaaaaat tcaattcact taggccttat ctcttgttgg aatgaaccag
      121 atgattaatc cttaatattc ttcagggata cagagaatat caccaattaa attaacaact
      181 acaaagttta tgctccgaga ttcaaaaatg aaagacagaa acactttaat ttttcacaag
      241 ttgttacctt aa
//
LOCUS       KCKM01002066             713 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32509apa ultra-conserved element locus
            uce-6140, sequence.
ACCESSION   KCKM01002066
VERSION     KCKM01002066.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 713)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 713)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..713
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32509apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>713
                     /note="ultra-conserved element locus uce-6140"
BASE COUNT          218 a          143 c          110 g          242 t
ORIGIN      
        1 ttgggcgcgt gggctttaat ctcagagtat tcacatccct ctttcacttc tgtgcctttg
       61 gttaagtaga gacagtaact ataagtccct cagtgactaa aatgccaaac cacacacgac
      121 accctctttg cactccctat taaaatttta caggtcaaaa atccaaaacc cacttaataa
      181 aaattgttct tcatcgtaag tgacaagaga gaacaggtca atctatggaa taatggtgca
      241 gtaattagaa cctttgtagt tgataaagtg tgactgttaa tcaatgtttg gctaattaat
      301 caatatttta atcattagac cttttaaatt tgttttaatg agcatttcct ctaattccct
      361 tgatcctgtt gcttccaaca cttctgttat ctctattaaa cagcaaagtg agtgttctta
      421 tacccagaat attctgtaag tttgtagatt ttgtagttta ctgctaagat acatgaacat
      481 atctgaggat gagcaaattc agatccttaa ataaaaaatt attcttccac cgtgtgccct
      541 ccatgtttgt gttagaacag tgtggggtgt ttggcagaat ggacctccac aattcaatgg
      601 tgcactcctt tgataaattt tgatatctta ctattcttaa gaaaacatat gctactgaat
      661 aacagttact cattccctga aaactcctct cttccattta aaaaccttac tca
//
LOCUS       KCKM01002067             552 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32523apa ultra-conserved element locus
            uce-5220, sequence.
ACCESSION   KCKM01002067
VERSION     KCKM01002067.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 552)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 552)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32523apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>552
                     /note="ultra-conserved element locus uce-5220"
BASE COUNT          184 a          115 c           85 g          168 t
ORIGIN      
        1 actactgtag tcacttacac tcttacaaaa catgtgataa ccccaatagc ttaatattca
       61 gcatatataa ttcatttaca tgatatagca ctcttgattg tggccctaaa acagttttta
      121 ttcatatcta gcagctttct agatcaacca caaaaacttc tacagccagc aatcaaacta
      181 cggaaccttc ggaaattaaa gacccacaat attaaaatac acagaacaaa atatctgagg
      241 tataagataa aaaatgtaat tttttcctct ttttagagtt gctaaaatga tgcactactg
      301 catgtattgc aatacccagg cctcggaaag cttccttttt ccccacattg gaaggttttt
      361 atggttttgt catttagtat ggagcaaaac ggctgtatcc ccctcggtat atactagcct
      421 gtaatgaaga aagaacgaga ccgacatcat cagcatggct cctagtcttg gcatcagtca
      481 agggtgcaaa agcattctga aacaaagcaa ttcgatggat tgttttttac atttacttct
      541 tttaacaact ag
//
LOCUS       KCKM01002068            1102 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32539apa ultra-conserved element locus
            uce-182, sequence.
ACCESSION   KCKM01002068
VERSION     KCKM01002068.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1102)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1102)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1102
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32539apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1102
                     /note="ultra-conserved element locus uce-182"
BASE COUNT          299 a          232 c          217 g          354 t
ORIGIN      
        1 taaaaatggt atttattaac catctgaata taccacattc cataagagct gaagctcctc
       61 ctccttccca tgctcagggg ttagagattt cctctctaaa aatttctttt tgtttgtttc
      121 taacatgaac ctttaccaat gttgttgcag tttgcaataa caaaaggctt ttttgcttgt
      181 ttggaaaacc cattttactt ccagattaaa ggttgcaagt tattgatcag ctaagtcaat
      241 gcaatgaagt ctcctattat gaaaacctga agtatgcaag ggattaaaca tctttcttct
      301 agattcaggg tgcgtggggg gggcacatgg taatgctaaa aatgtttgag gctgcaaaga
      361 ttaaataaag gaacatatca atttggagcc agtgaattac atccagctgc gacagtgaat
      421 taagaaccga ttaatggcta aagcttttct ccagtttgga tgccgaagca aactcattaa
      481 gcttttagag tagctataat gtgtgtactg tgggaactgt tcaatgctat tcaggagact
      541 ttaactgtaa gctcagagca tttcccgcag agcttctgat gctattttct ttatataaca
      601 tgtgtgcctg aaaatccagc caaaaacaag ccctttgttt ttctactttg ttgtggtctc
      661 tctcagcttt acgtttcttg aacacaggta aataaactca taatccagat ggtgcaacag
      721 atgtgagagc agcactctga aatcaacaga cagtgggcaa tactttccat tttctctttt
      781 aaacgctaac taatatgtaa ttcggaatct ccggtgtagt tagcatctgc tcccttcggc
      841 cagccaaagg ttacaggtgt tcctgatgtc atttcacagt aaggcgtggg cctggcttgt
      901 gagtgagtgc ccaggctcta atctttccct accacctacc agttttctca tgctgggcct
      961 ccatttgctg catcttctgt gtcagctcct gctctctttg ctgggcctga agggctcggg
     1021 cctttgcttc actgctaatg ttctgctgaa tgctctcttt ctccaatcta tttgaaaaac
     1081 cataagtaaa taacgaaaaa ta
//
LOCUS       KCKM01002069             496 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32554apa ultra-conserved element locus
            uce-7069, sequence.
ACCESSION   KCKM01002069
VERSION     KCKM01002069.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 496)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 496)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32554apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>496
                     /note="ultra-conserved element locus uce-7069"
BASE COUNT          116 a          102 c          164 g          114 t
ORIGIN      
        1 ctgctgcaat ggagaagagg gtctgcggcg gctggggagg ggtctgctcc tgtgctggag
       61 ctggaaacct ggggctgaaa tacggtgtct ctgtcagggg cgaaatccat ggagggacac
      121 cgtcgggtca cgctgactag tagggctcag cgatcaaacg tgtcacacct gtcttggcca
      181 tgggtgcagg tgttctaggt cagctctcgc tgtggttatc aatcgctgac agttgacagt
      241 ttaattttac accacaagta cctcattact tgtgtaggca cttgaagaac atgtgggcac
      301 tgggttggat cagtgatcaa tgacaaaggt tgcgcagggt gcaagtggta gcagtaaaag
      361 tgaaggtctc cgtgcatgag ttggcagtgg tggggataca tgacaagggg agtttagctg
      421 acaaacagtc tgtcagggct ggaagaatgg aggctcgccg gagagctggc gctccattat
      481 aaaatacagc tcgcca
//
LOCUS       KCKM01002070             549 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32570apa ultra-conserved element locus
            uce-6892, sequence.
ACCESSION   KCKM01002070
VERSION     KCKM01002070.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 549)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 549)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32570apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>549
                     /note="ultra-conserved element locus uce-6892"
BASE COUNT          169 a          110 c          116 g          154 t
ORIGIN      
        1 agtccaataa aagatattag ctcttttccc taagcaaaat ccctctcatg agtcaggccc
       61 ctacacttgc aactagtgtg atattgctgg ccaggtttca ccccagtaaa attctaatct
      121 atactttgtc ttgtagaatt aagaggaaaa tgcatatcag cagaatctcc tctctacttt
      181 atttcattta taaattacga gaatgatgct attatatatt attaatttct gctgttctcc
      241 aactcggctg cagcagtgag ctgcggatgt tggaacggtg taattatgtt ctagtagggc
      301 agccatccgt ttcctttcaa aaatttacag gattcttaat catgctgctc atttgggtgc
      361 gcagtagcga ggatggcgaa acacaaacag ggcacgttcg tttacacagg aacacctgct
      421 tagcatgata gcagatgtca gtcagcaagc agaacacaaa agaaaaaata tcaacaacag
      481 caaaagtaga agcaatttta actcaggtct ggggatagct cgtttagggg aagctgaagg
      541 aaggggctg
//
LOCUS       KCKM01002071             721 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32586apa ultra-conserved element locus
            uce-5640, sequence.
ACCESSION   KCKM01002071
VERSION     KCKM01002071.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 721)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 721)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32586apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>721
                     /note="ultra-conserved element locus uce-5640"
BASE COUNT          182 a          178 c          197 g          164 t
ORIGIN      
        1 tttggagtat taaatgacat aatacgatac tcttctcttt ttgaaagggc tcctgaatat
       61 tctaatcaat catgaagggc atgctagaga ttttagtctt ggggtagcca aggagtacgt
      121 gcagcagttt tgctttcaca atagccacgc tcgtctattt cctcagtatc tcagaggtcc
      181 tgctttcctt aacccagcga cgtacatcgc cccggctata catcttgaca gagcgaaagc
      241 aaaataatca cggcactcag cgatgccatt aacatttcgg agtcccgagg gattaaaaag
      301 gctggacccg aggcagatgc tgcgagagca gaggggttca gcagcgcccg tcgcagcctg
      361 ggctgcagct gcggggaggg attgacaccg ctgactgtgg aacccagctc gggagaaact
      421 ccgggcacag ttccggcatc cgaaataaat taaagtaaac agtgttgctc tctctcatcc
      481 accctgttag cagcctctca gttgagctgg agaccacaca cccagaccac acagcaccag
      541 ctgaactcac tcgcacgcaa catctcgaag ctgtcactcc gctgaggtac ggggaggaaa
      601 aaggggggca ggagggcgag tgtgtgtgtg tgtgtttaga aaagccgctt gctctcccct
      661 cctatcatta cagctggttg cgttttgcgt ggttgggaag gagggaaaag atgggaggga
      721 t
//
LOCUS       KCKM01002072             703 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32601apa ultra-conserved element locus
            uce-2893, sequence.
ACCESSION   KCKM01002072
VERSION     KCKM01002072.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 703)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 703)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..703
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32601apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>703
                     /note="ultra-conserved element locus uce-2893"
BASE COUNT          236 a          129 c           88 g          250 t
ORIGIN      
        1 ttgttattat tattattatt agtttatgta ttttactgct atttttagta gggcaaagtt
       61 ttaactgttt ttataatttg agaaccttta atgaaaatgt aaatataaat actataatta
      121 ttaatttttt gtaacttgca tgttgaagaa gttgcagctt agggtttgtg agattgtcaa
      181 tgttagagtt ctgttctttc tttttgttga tgggcatgaa tatgctcatt tgtttttgta
      241 tattgcccat cccttcctta cagccagaag ctctaatgct gctagatcac tccgtaccgc
      301 ccttacatgg acatggcaac tgacttacac attcactccc atcatcttca tctcctgtgt
      361 agtacactca tagattttta cactcccact tcatccaccc taggcatttt ttcttcctat
      421 aagttcccct ccaccacccc tttctttagc attgttaaaa ttttatgtgc agtcattcat
      481 tccttaaaac acacacacac aaaaattata gaaaaaaaga aaatgtttaa aaaaatatat
      541 atcaaattga ccaaaaaggc aaaaaagcaa caaactctgc ttttcaaaaa acattatata
      601 tgtagatatg caaacaagca aaagtaagtt ctataaaatg tacaggattt ttcaactgta
      661 atatgctaac aactttacat aagattaaaa aatacaacca aaa
//
LOCUS       KCKM01002073             168 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32616apa ultra-conserved element locus
            uce-2041, sequence.
ACCESSION   KCKM01002073
VERSION     KCKM01002073.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 168)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 168)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32616apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>168
                     /note="ultra-conserved element locus uce-2041"
BASE COUNT           48 a           21 c           35 g           64 t
ORIGIN      
        1 tgggccgata gttccctagg tagtttttgt actaatgaga ggaaaattat atgtacacta
       61 ttaccaggat aaaagggtct attagaggtc ttttgcttga catatttatg tatttcaaat
      121 actaagtagc acagtgaatt aggtttactc tgggcatttg ttattttt
//
LOCUS       KCKM01002074             490 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32630apa ultra-conserved element locus
            uce-1653, sequence.
ACCESSION   KCKM01002074
VERSION     KCKM01002074.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 490)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 490)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32630apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>490
                     /note="ultra-conserved element locus uce-1653"
BASE COUNT          187 a           87 c           77 g          139 t
ORIGIN      
        1 cccccaccaa tcaaggattt ttttaaaaaa aaaacagacc aaaaaaaccc caacttactg
       61 aataatatgc caaaccacat gtgtaaagga ataaaatgga atagttaaca ttcagctcca
      121 tgccattcat ttccccctaa aatgtaatga taattagatg ggtcataaaa tgctcttctt
      181 ttcattatga ctgatgaaat gcattaaagc tgacagggta ttacctgaca gtaattaggt
      241 tttgtcatga attaaattat ttgaaagcag gctatctccc caatcatgca atttacagca
      301 agattttttt tttaatctgt gctacagaag agagaaagag agatagaaaa tagcagtttt
      361 tctcttcata atcatatgaa ttattcacag aaaaaaaatc atcagaaaaa aatcgtgcag
      421 atgaagaggc ttgccactta atgtactgca cagatgtgat catcagcggt tgccgacaat
      481 gaaatataca
//
LOCUS       KCKM01002075             851 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32646apa ultra-conserved element locus
            uce-7215, sequence.
ACCESSION   KCKM01002075
VERSION     KCKM01002075.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 851)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 851)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..851
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32646apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>851
                     /note="ultra-conserved element locus uce-7215"
BASE COUNT          183 a          213 c          165 g          290 t
ORIGIN      
        1 atacagcaaa tgccatgcac aaaatcttcc tttttaactt ttctcttgta tgaggacaac
       61 agacagcgga aatttaagcc gggctatgat tccagggaag gtatctgaat tccactgaat
      121 acagaaaata tgcagaatag caactgattt atggtgcctc atttgctgtc tgaatagaat
      181 gatgttctct gtattcccaa caattttctt tttcttcttt tcctcctccc tcatggtttt
      241 ttctcccctc tgcccaagtc attattttaa gggttttggg tattaaacct aaaggttcat
      301 caactcacat ctttacagct ctgtctttct gtatacagga ccctgtctgc ctgtttcctc
      361 tattgcacta ttttgtttgt actactgtaa tcattttgct ggcccagatc tgtgtgggtg
      421 tgctggcagc tttacaacaa agttacatgg gaactgagtt aaggttgaat atttattaga
      481 agaagccatc tggcgtcagg ctgtctgtac aggggggctt atttctttag tagtctctcc
      541 tttttctttc gagctcttcc tccctctctc tccgtttctc atttacgcgt cgcatacatg
      601 tgaaaagtgg aacacacatc ttgacatatt gatttgattc ttgatattta tagcaattaa
      661 ccccgctcgt gtgattctcc ttgtcccctt gccccatacc tctctctccc cactctttcc
      721 ctggggtggg ggatgctcgg ggtttgttcc tgcggcagca gccccacgga tgctggaggg
      781 gtcccaccac agacctttcc tgctcacatc gatatagctc cgggcagcta tagcttcgct
      841 taaacgtccc t
//
LOCUS       KCKM01002076             354 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32662apa ultra-conserved element locus
            uce-2297, sequence.
ACCESSION   KCKM01002076
VERSION     KCKM01002076.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 354)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 354)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32662apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>354
                     /note="ultra-conserved element locus uce-2297"
BASE COUNT          105 a           55 c           75 g          119 t
ORIGIN      
        1 aaaaaattat cagatttaat tttatttgtt ttatattcag ggcttttttg aaggaattcc
       61 tgcagggaaa tggttaatct atttttaact aaagcttact tttgtaatct atccagtgct
      121 tagagttctg tcattgatct atgatttatg tgatttaaac cacctcttgg ctgtaacatt
      181 ggtttctatc caagatgctg agctgaatac taattacgag atcaaattta tgctgttggg
      241 ctaagcagct gaaggagctt tccatgcagg actcccttaa accatgccac tgctgagcat
      301 tagcgaaata tttgacagtg gggttcaggg gaaaaaggct agaagagggg aaaa
//
LOCUS       KCKM01002077             417 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32677apa ultra-conserved element locus
            uce-2257, sequence.
ACCESSION   KCKM01002077
VERSION     KCKM01002077.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 417)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 417)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32677apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>417
                     /note="ultra-conserved element locus uce-2257"
BASE COUNT          156 a           55 c           85 g          121 t
ORIGIN      
        1 cattttcaaa taaaagtgct acagtttttt aaatagaaag gtaaacagag aagaaaagaa
       61 ttgaagaaga aaaaaactgt tgagaagatt cttagtaaga aaattgaaac aggagggaat
      121 ggcatgcaga gaaaaatgca agttcacaca ccaaagttag aggatttggg attaattgaa
      181 atcctcaagt ggtgcatggt aagtgactgc ctatttagag ccaatagata ggtttccgtg
      241 aggttaagga agcgaaaaat cccatacgaa gctagtgaga tgttaaattc taattagaag
      301 tgttaattaa aaaaaaacat ttccaatttc atcagtgaga gtgcttttgt tgttctgatt
      361 ctctttgcta cagtgaatcc taagtatcct aactcatttt gtcccagtat tatttac
//
LOCUS       KCKM01002078             624 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32692apa ultra-conserved element locus
            uce-2284, sequence.
ACCESSION   KCKM01002078
VERSION     KCKM01002078.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 624)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 624)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32692apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>624
                     /note="ultra-conserved element locus uce-2284"
BASE COUNT          181 a          118 c          148 g          177 t
ORIGIN      
        1 acgaagtgta ggcagccgca taaggaacca gagggcagca cagatttgtt gtgtgagaca
       61 agtgtcagct ctgatcacgc gaaacctcgg ttcctaccac ctcctccttg ctggatcagt
      121 tgtggttggg agccgtttac atatattaag tttgcaatca gtcctatgta aaataccacc
      181 agattgtggt cagtggttgt atgcagactt tgtcattttg cttactgacc acacgttccc
      241 attgatcaat tctaaattgg attattgtta ggtttaaaag cgcctcaaca gcagaaagtg
      301 gcggtggagg ctggcaaagc agagatggat agcagaataa acagggaaag tgacaagatt
      361 tcagactgaa ttgatcactg tcagcgagtt agtggtcagc tgtctgacct ttggtgccca
      421 aaccaaacat cagaataatg tttagacaaa cacatttgat ttttgaggta atgggtatgt
      481 caactaaatg acaaacctta gaaaggtcaa agggatatcc atttttcaga tttttttcaa
      541 gcattaatcg tccatttggg gaacagcgtc tttctaagct ggagagaaag agaacttcac
      601 tttctctatg tgtgtgctca tagg
//
LOCUS       KCKM01002079             570 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32708apa ultra-conserved element locus
            uce-1159, sequence.
ACCESSION   KCKM01002079
VERSION     KCKM01002079.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 570)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 570)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32708apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>570
                     /note="ultra-conserved element locus uce-1159"
BASE COUNT          164 a          107 c          127 g          172 t
ORIGIN      
        1 gcgctcctag tttttgcatc tgattactcc ctttatttgc atttttttat ttctgttacc
       61 tagtgggtta ggaaaaggaa gtgcttgagg aactgttaaa catgtagatg gaagaagctc
      121 tgtgtctcta aattccctga agttaggagg tggatgtggc aagagtgtgt agtagaggga
      181 ggtagtatga gtaggaagct actattgaca ttgttctgtt gcagcaattt tagatggaca
      241 aattgcagtt gagaaaattt catgactcgg taaaatgagc aatgatgaca tctgtggatg
      301 caggtctgtt catatctttg cagagccttt agggaaataa atatctcgga acattcggtg
      361 aagtgaagct cactcaataa atcaacctga cacaataaca cttctggcac atgagctcta
      421 cttctcctca gcaccaccta cccctctgtg ttcctgtgct accaaatggt gctccccaca
      481 ggcccctaaa tcaaatcaga gcacacaaat acagtgagaa tttattggga attggttttg
      541 ttcggcaaaa acattactta ttagatgaac
//
LOCUS       KCKM01002080             789 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32723apa ultra-conserved element locus
            uce-3486, sequence.
ACCESSION   KCKM01002080
VERSION     KCKM01002080.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 789)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 789)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..789
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32723apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>789
                     /note="ultra-conserved element locus uce-3486"
BASE COUNT          242 a          142 c          146 g          259 t
ORIGIN      
        1 agtatacata aatttattga aggttgaaaa gaggtcaaga tacataaaat ttctaaaata
       61 tctactaaat acataatgtg attttgtggc agtgagtttt cagtggattg gtttaccact
      121 gttgcatgaa agttttagag taaccttgta aaagtgtgta aaataaaaag ttccaggcat
      181 ggtctcttcc ctgccttttg atttgctaca aatatttagg aaagaagagt gcactctgct
      241 ttttttaaaa gatatacaat caggaaataa aatgagatgt tagctctctt ccacctcccc
      301 cccctaatcc ttcgccatcc cttcaaaatt actgttgact aacaagttgt gtctcttttc
      361 tctgaggcag tgggtgcaag acaactactt gagacaagag aggaacattt atcctccagg
      421 cttctcatac ttactcaagc agaaagactc tgcatgggga gaaggttctt tacagcattc
      481 cacattttta atgagcttcc ttgcaaaggg tatgggcttt cccttttttc agctaaagct
      541 tctactcaaa gagggatttg ttctcattaa gaagggaatg ttaagggatg atagtttaag
      601 gtgttcgcat actgctgttt aatcaccttt atgacaaaga ttaaacttta ctgaaaaaac
      661 tacaccatat tagacagcct acccagatac aagtgagtat gcagcgtgtc tttttttaaa
      721 ctctcgttag ggtttatttc tgttatatcc ctttggagag tcgatgtcat taacagaaat
      781 aattatcat
//
LOCUS       KCKM01002081             654 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32739apa ultra-conserved element locus
            uce-7895, sequence.
ACCESSION   KCKM01002081
VERSION     KCKM01002081.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 654)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 654)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..654
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32739apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>654
                     /note="ultra-conserved element locus uce-7895"
BASE COUNT          170 a           97 c          120 g          267 t
ORIGIN      
        1 tttatgtcat tattttatgt ctctgtaggt tttgtgttaa actcgtgtac agagttagtg
       61 tgtgttattg ataacgtgga actggacttg gtggatttta atgtcttttt tcatgtttat
      121 atggaacatt ttgaagcagc aattaaaata attaaggagg gtgaagaaat ctttagcatg
      181 caacaaagat ttctgcaaaa tgttaatttc tgtcaaataa gtgaatatat gcacagatgc
      241 ctcctgacag aggctgtgat ttctgagtgc tttgcatgcc aaataacttg tttaccccct
      301 caatgtttgc caagtttact gtcaatttac aaataatttc cattttgctg tttattctgc
      361 tgccttttga tggatatgtc ttccagactt ttatcttgca tgtagacaaa ctaattaata
      421 ttttcccttc aggcaaatat ttttttctta gatctaaatg tgggttagat tcttcttcgt
      481 ttccatatgc tttgttctgt caatcatttc tcttctgtgt tactaaaaat gtacctttgt
      541 ggatgtcatt tctcatgttt tacagattta tttcccctac atctatatgg ggatgtgtgt
      601 atgtagagag acatatttgt tatatatgtg ttcatgtgtg tttaagcaga gaga
//
LOCUS       KCKM01002082            1221 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32755apa ultra-conserved element locus
            uce-2246, sequence.
ACCESSION   KCKM01002082
VERSION     KCKM01002082.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1221)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1221)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1221
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32755apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1221
                     /note="ultra-conserved element locus uce-2246"
BASE COUNT          338 a          245 c          280 g          358 t
ORIGIN      
        1 aaaggtttgc agaccaggaa aagttttctg tccagattag tgcaattccc atgcaatgag
       61 aattttgaat agagaagcca tgtcttgtgc ccccacttta aggaccattt tacaccatgg
      121 ctcaaggggt cccagaaatt acagggatct ggtctaaaat ttttctgcct gaattcctgt
      181 tgccggccac tcgttagggt ggagaaaggg caaaaaaagt atcagaaagt gctgtgggac
      241 tgtttgtctc cttttcccct ctctcccact gcccctcttt gcctcatctg agacgtttct
      301 gaaataactc acagcccccc cttcggagga accgatgttt gggggtactg agcaggacct
      361 ttcctctcgg tcggtcaggc cccgtatcaa aacactcctg actgccggga agtcggcgct
      421 gctgaatccc gaggcgttcc agtgccagtc agctgctgtt tgaactaagt cctgaccgca
      481 aaatcaaaag tgggtccaaa gaaagctgta aacagtgtgc aatgagccat ttgaaggcag
      541 ctgatgcctc atttggggtg acatgttgtg gctgatgagt gtggatgatg tggggttttc
      601 gataagtgcc tcatcagtat cctcatcatg atcgtgttgc tcagccacgg cgtgtgccct
      661 gacttgattg taattgcctg aatctgctcc tgctgctcag gagcgcacag taatatgcaa
      721 taaaacagca agaagtgaat gttaaccatc tgagttctga catggctgct tgcagttcaa
      781 gttttccatt aaggacgaaa aaatccatat agacacacaa atatggatat ataattgcat
      841 atttagaata attattgttt gtatatgcaa taaactcatt ttataaataa tgcatgatgg
      901 tcatatacag atatatagat aaatgtatct atattcatct tccctttgac acctgtatat
      961 atcatgaatg tcacatgctc atggtgtgta ggtaaataga agagggataa gagcattagg
     1021 accatacttt gattcaaatt tttaggaaca taagctgaac ctgtagataa atctatgcat
     1081 agtcttcata gatcttaata acacgtgtgc atacagataa gtaattgatt tttagatgca
     1141 gttaatctac tcatgtaaat gtgcgtgtgt gtacttgtgc aggtgtgtgt ggggggagta
     1201 gggtacacat gcatatgtgc t
//
LOCUS       KCKM01002083             730 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32771apa ultra-conserved element locus
            uce-6298, sequence.
ACCESSION   KCKM01002083
VERSION     KCKM01002083.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 730)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 730)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..730
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32771apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>730
                     /note="ultra-conserved element locus uce-6298"
BASE COUNT          204 a          138 c          150 g          238 t
ORIGIN      
        1 aatatcccct gtaatttaag ttcaatatat gttgggcaac ggaaagacac tagcaactaa
       61 tttttaaggt ttcttacagc agtagcgggt ttataacttg caacgaaagg aggaaaaaag
      121 gcacaagcgg ccagggtctg ggctgggaga atcccaccga tgccttagtc ataaacgtgt
      181 acaatggcag ggttttattg tctcttgtta agcagttcat aagtgacccc gtttgtttct
      241 gaatagccgt gttttgatga cttatagtat atgcaaaaac aaactttccc gcggtgtttt
      301 ttttttctcc gtcatgcttt tcttttcaaa cagccagatg attttaaaaa gaaaaacacc
      361 cagaaatgat aaatcgcgtc gcatagctaa tggctggagg gcgcgtttac caattcataa
      421 tcatttattc ttggtgatgt atgaccctta ctcttaaatc tcaaaagctt ctatttgaag
      481 gtgtaaatag ctttttcccc cttgcagtaa accttactgc attagcagtg attgatctcc
      541 tgtacaattc gtcccagagt gctattttag agggggaaca ctggcttttg gagattaact
      601 ggggagtctg ttacatatta atgaacctag gagatatact aacgttttgg taatttagtt
      661 atttgtgtct atagctttcg ccgttatttt ctcttagacc cccgcggttg ttatacaccg
      721 aattaaaaag
//
LOCUS       KCKM01002084             530 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32787apa ultra-conserved element locus
            uce-6280, sequence.
ACCESSION   KCKM01002084
VERSION     KCKM01002084.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 530)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 530)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32787apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>530
                     /note="ultra-conserved element locus uce-6280"
BASE COUNT          190 a           74 c           95 g          171 t
ORIGIN      
        1 ttttcatgtg tttatttgga aatgtaaaaa aagatcaagg tgttctagat cacatcagtg
       61 tatgggaggt gataaaactg tactatatta agctctgcta atatataagt agaaatacta
      121 aaaaaaatga tggtactata tgttccaact atcagacaaa tcaaatcgat gtttcatgtg
      181 agaaaataca atgaagtcca aatattatgg ggaaaaaagg catttttgtt tcactaaggt
      241 gtacatgtta aataatcaaa ggattcaaca tgacaatatg gttatagata gttatcttaa
      301 gtgccttctg tggtgaggaa ccgaaattaa gaacttgaac aaaacatgat acatgaaagt
      361 gcaggttcta caaacactgg gttgcttatt aaaactactt tgatccctcg tttctttgat
      421 atcctaggtc ttataaagaa ttcactttca ggggtaaata taggtagttc agagagactt
      481 tatgacatac tgtacatact gctcttccag agacactttt taattactta
//
LOCUS       KCKM01002085             696 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32803apa ultra-conserved element locus
            uce-5573, sequence.
ACCESSION   KCKM01002085
VERSION     KCKM01002085.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 696)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 696)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..696
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32803apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>696
                     /note="ultra-conserved element locus uce-5573"
BASE COUNT          206 a          120 c          127 g          243 t
ORIGIN      
        1 gctcatttga tttttcatcc ttccagcatt ttacaggtta attacacttt cctgacttgt
       61 aacttccttt ttggttatga gacacagtgc cagaaccagc tgctgctgct gtagaataaa
      121 tggccaattt tgtccattgt acacaaattt gttacaaata actgagctgg gaatgcatta
      181 ggcaacattc ataatatata acccacagct ttcgttttta tgatttagtg atatttctgg
      241 atatttgtaa atgtgaagat tgtttctgcc atatgtagcc acttcatttt aatttgccag
      301 tgtcagtaat tccggagaat aaaggaacat tttgtattgc atgcaaacag atcctcaggt
      361 gcttgcgata aaacttaatg gccaccatct ttacttgtag tcattgtaag caatttcatc
      421 agaatgggca atatttttta atttaaaaga ttcaggagat ttagcaactc tctattgtca
      481 tatatattta gaatactgat tttgtcagtt tcgagcgtat aaatcttggt cctttgatct
      541 ccagtcattt tgacaagaca gaaaatagcc tcttggagta aattggaaca gtatagaaat
      601 atgtttggga tttatattaa caatgattgc tgcagggatg aggccattat ggctcccgtc
      661 tgacagaaca gcataatttc atacggaagc tactag
//
LOCUS       KCKM01002086             725 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32819apa ultra-conserved element locus
            uce-1746, sequence.
ACCESSION   KCKM01002086
VERSION     KCKM01002086.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 725)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 725)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..725
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32819apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>725
                     /note="ultra-conserved element locus uce-1746"
BASE COUNT          236 a          128 c          135 g          226 t
ORIGIN      
        1 ttcaagaaaa tatttaaata aactttcttc atccagaaat gagatgcagc ttatttacat
       61 ttttatttga tgaagcctgt tcctgctatc tttgttctta atttggtctc aaaagaatta
      121 gtagtaagag gaaaaatagt ctgtaaatat gtatgaaatc aaatttagag agtaggctaa
      181 aaggtattga ctgccagcag tgctaaacgg caggaggcaa aatttcctcc atagttttct
      241 tcttggctgg aaacacattg ccttccatct agattattta atcctcaaaa tgcacatcaa
      301 agcttctcat cgggtggtgt atgtctttat aggcagctga atgtcaaaga tctagcttaa
      361 agatttttga aaaatgtaaa acataataga tcccagataa taacacagca gtgaagatcc
      421 tgtactattc cttccagcaa agtactggta tcacaggttg taactaatct ttgtggcaaa
      481 agggagagca aatttcctgc atgagaattt gtgacatcca tccagcagat agaaacagaa
      541 tgatctagtc gtgttactgg gctaatataa gcttgttaac aattccctgc tctctttaca
      601 cttgtggctt gccagaacaa taggctatga gttatctcac tcctacagcc caattagaca
      661 gtggaaaaat gtatgcaaaa taggtgtgga acattttcct cttgtatatt cttaacagga
      721 tgcag
//
LOCUS       KCKM01002087            1044 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32835apa ultra-conserved element locus
            uce-2960, sequence.
ACCESSION   KCKM01002087
VERSION     KCKM01002087.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1044)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1044)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1044
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32835apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1044
                     /note="ultra-conserved element locus uce-2960"
BASE COUNT          353 a          188 c          167 g          336 t
ORIGIN      
        1 ttcctttaat tttctaatgt agtaaaatca ttggggcctc tcatccctgt atttgagaac
       61 acaagtcccc ttgggggtta cctggaaaac ttctctttct ccttagcctg cctcgaacag
      121 atagcatcgt gcctggagaa ctctagcact gaacactgct tcagctccag aactccaacg
      181 cggggaactc tgcatataaa actaaacttt ctggcaagga gaggtaaaac atagtaacaa
      241 aattcagttg aaatttatgc cactcaaacc actgttgcat tgatttttcc tgtccattat
      301 cccctgatat caacaaggac attaccactg ccttatttaa acatagacca aaagatggta
      361 attataacac cataacattt tcttaatcta acattaataa tacagcaaaa agattctcct
      421 gcaaaactaa ttttgtcata tttccaagct ccattctgca ttatttcatc cagtagccag
      481 ttcaggttct ctttacctgg tatggtgtac ttcactgaat tgttttgtca gatgctgtca
      541 agccaaccta ccattgttaa agaaaatcaa agtaaatcat tttggcatga gccttccagg
      601 aataaggcac agaatatgaa gggtttgatg aaatcaagga tttgatttca atattgtaaa
      661 agactgcctg tcaaaaatgt attacattct ttcaaacaat tttgaataaa taaacgtgtt
      721 taaaactgtg acagtacaat ttagataaag ttttaggaga tatttttaaa ttataataac
      781 ttgaggtaaa acaatacttg cagtgctcct atttaaaaag aaaaagccct ctgaatgcta
      841 atagtagata gagatttcag aacacttgca tcttgtgaac atgttgaaaa atctaatttg
      901 aaaatatcat cttattgtgt aagactgaat aatgtcaatt aaattatttc ggtattctga
      961 agatgaatac aggaaggtac cgttaacttc tagattgcat agaagatttg taatatgctg
     1021 aaattgattt catattaatt ttgg
//
LOCUS       KCKM01002088             808 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32850apa ultra-conserved element locus
            uce-3874, sequence.
ACCESSION   KCKM01002088
VERSION     KCKM01002088.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 808)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 808)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..808
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32850apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>808
                     /note="ultra-conserved element locus uce-3874"
BASE COUNT          221 a          208 c          151 g          228 t
ORIGIN      
        1 ttctcctgct tgtttaccct cctaaacaaa ttacgcttga tggagaaaaa agagggaaaa
       61 aaatcaggga aaaaaccttc cctttctacc cacccttgaa aaatatgccc aagtgatgtc
      121 tctttctggt atttcacatt gctgggagtc aggaaaacta gcctgtgcac tttccatgtc
      181 ttctgtttta ataaactgca cattagtttc actcagcagc tccagcccct ggctatccgt
      241 cccgctgtat attagtttta aatacacatt gcttgcaata acactggagc aggaagctgt
      301 gcctcaagtt aagaaatggt taggattgct ttacatttgc agtctcattg aaaacattta
      361 ttcaatcaaa gggaaaaata aatgtggtcc ctccgctctg tcaagtataa actgttattg
      421 atcccctaaa tgaaatttgt ccatgctgat cgatcaaaca cattatcttt tttccccagt
      481 ctattaccag caattggaaa ctctcaagca tcaatagcag cttgaccaca cacaacggta
      541 caattagcct accagctccc aaaatccaaa ttattcccgt tcccctcctt tccccgcgga
      601 cagcgggatc tctgcattat gactctattt ttcctgagat gaaggttaga aaaagtcaca
      661 tttcataaaa tgctgggaat tgtccgtgtc gtgttaaact ccagccacgt ggtaacggcc
      721 atgtgacagc gtggggaggg ctcttggcag ggtcctgggg ctgtgccagc tccgaaccct
      781 gcccagagtc cccttctcat ccccaccc
//
LOCUS       KCKM01002089             930 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32865apa ultra-conserved element locus
            uce-7202, sequence.
ACCESSION   KCKM01002089
VERSION     KCKM01002089.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 930)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 930)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..930
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32865apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>930
                     /note="ultra-conserved element locus uce-7202"
BASE COUNT          284 a          187 c          184 g          275 t
ORIGIN      
        1 aaattgtgga ctagatcctg acctcaggct atatcttgaa gacagccgta aaatcaatag
       61 aatttctcca aatttacaca aacataattg acaacagaac tcagactctt atctctccat
      121 gtatcatcac tctcagcatc ccccaagtgc tagtgccacc atactgctac tgaggcagga
      181 tcatcagggt gaagtgaatt tccttgcaat ttattacatg atcactgctg aaatacagct
      241 ctctgataaa ggaatgaagg ttcctttcag agccacagat ctcagctgtg atgctgtggc
      301 ctccagactt tcatcagtct aaattatttg atacaattta attagtccaa tcaaaagacc
      361 cagcagttct tataactctg ctcaggaaag agaagaggaa aaaaatccag tgctttgttt
      421 acttacaatg ttgctcctaa cgcatgaaga cacaccaaaa taactgctgt ttattttacg
      481 agatggaaaa aatattgaac gccctctggt catagaagcc attttctttt gggattacaa
      541 gtgcagagat gaattaggta cacttaggat caatatctgt ttctcttctc ggctcaagat
      601 gggatttgtc aaaattcgag agcagcttct attgagtgtc agctacaaat ccttccagta
      661 ctgagtcata tactcattga aagttgaaat ataaatggca aagggctttt tcagctacaa
      721 tatcagaggt cagaatggta gatcaccttt cttccttctt tttaatgagc tttggtttga
      781 tgaagtgacc ttgtgggtct ggaatctaag gacatacagg gtctttacaa gctatggctg
      841 tgtcaggttc tgtgtagcac acagatctgg gaagtaaaaa gcaccacaca gtgtagagga
      901 tgtttcagga cctggtcatt agtgctgata
//
LOCUS       KCKM01002090             544 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32880apa ultra-conserved element locus
            uce-6461, sequence.
ACCESSION   KCKM01002090
VERSION     KCKM01002090.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 544)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 544)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..544
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32880apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>544
                     /note="ultra-conserved element locus uce-6461"
BASE COUNT          128 a          167 c          144 g          105 t
ORIGIN      
        1 gcagcggggc cggggagctg ccggcacttt gaagcgagtg aaaaaatcgg cgttgagatt
       61 tgacacccag ccctcgacca atccgggagg gcttttcacc tgccatcacc tcctccgcca
      121 atgggaggag gccttcgggc cgagagccct ccccggccaa tggggagccg gctctgccac
      181 ttagttaatg atgcagcagt acagggaaga ctatcacatg tgagctggaa ggctgccagc
      241 atggagacac ggagagagca aggtaaacaa ctttccaacg ccaaaatgat gacatttaat
      301 ccctaaatgc tagcttcccg tctcgactca tccttaaccc ctttcggctg gtggtggaag
      361 cgtctggaag gcaccgtctc tacctgtttt ttaaaaactg gacgacgtgc cctgcaatga
      421 tcactgcgtc accggtcgcc actttcccaa ctacgcagtg acaaacctcc gagctctgaa
      481 gcgcagggcg cctgttaacc cctccgccaa accctcgcca acacgccagc ctttagagag
      541 gcgg
//
LOCUS       KCKM01002091             376 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32896apa ultra-conserved element locus
            uce-4305, sequence.
ACCESSION   KCKM01002091
VERSION     KCKM01002091.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 376)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 376)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32896apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>376
                     /note="ultra-conserved element locus uce-4305"
BASE COUNT          128 a           41 c           73 g          134 t
ORIGIN      
        1 tatgttttag agatttaaat ataaaggaat gcaattttaa cgtattgtgt cattaagaaa
       61 tttaggagct tttagacaga ttctgaaggt agtggaaaat gagatgcagt gttgcattag
      121 acatgttttt agtattttct tctttttgta aaagctgtaa ttttcagagt ttagaaccaa
      181 tttaatgtcc ctggagttag agcttttttg tatccattgt ccattagatg aattactaag
      241 ccaagaatgg aatccattta taatatataa aatactggaa aatgtcttaa aaatagtcta
      301 ggcagggaag aaagcatcag gagttcatta aattcgaaga cagtgagttc tgaggttctt
      361 cttataatca gataat
//
LOCUS       KCKM01002092             830 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32910apa ultra-conserved element locus
            uce-5980, sequence.
ACCESSION   KCKM01002092
VERSION     KCKM01002092.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 830)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 830)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..830
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32910apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>830
                     /note="ultra-conserved element locus uce-5980"
BASE COUNT          257 a          164 c          168 g          241 t
ORIGIN      
        1 agagttaacc tggaatcctt tgccatttgc aatcctatgt gctggtttcc tgctagggag
       61 agtgcagagt gaattcattt tcagctgaat atgtcattaa ggaacaggat ttattaatga
      121 cttattaatg cagacagagt caaactgaac tctggttcaa atcctctagg attagaagga
      181 aatgcacaac tgcttacagg gcacgtggcc tgtatacagc tagttgctgc catcagatgt
      241 ggatatatag gcaatattaa gtattctgtt taatattgtt tgcttaaact cattacactc
      301 aaaataataa aaacttccca atttacagtg gcatttattt actgtcaacc accagccaag
      361 gtgaaagaaa tcccagttca gttctgtata taatctcaga gtctgtcatt cacatgtaga
      421 aaactcagct ctctatttag cacagtgttg gtgaaagata gacgtttaca gggcccctct
      481 gcccttgagc tgttccatta gtgcatggaa agcaccttgc agcctgtgac aagcgcagca
      541 gatcggcact aaatcaaaaa tcagtgccag ccagggatct aagccaccat gaaggtcaca
      601 gccatcagct gcatgccatc tcaatccaaa caaaacatgc tggatacagg gggattttca
      661 ctactcacaa taggagacaa acacatcatg ttagagtaat cccctgatag cagtgaaatg
      721 cgtatctgac cttttaaaca cttttgagta tttaataaaa ctttgaagat ggggaaagga
      781 gatgttgata atttttgggt gctttttata gtgtaactga aattttgtct
//
LOCUS       KCKM01002093             691 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32926apa ultra-conserved element locus
            uce-1381, sequence.
ACCESSION   KCKM01002093
VERSION     KCKM01002093.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 691)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 691)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..691
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32926apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>691
                     /note="ultra-conserved element locus uce-1381"
BASE COUNT          240 a          107 c          125 g          219 t
ORIGIN      
        1 tgagagccct ttgataaaac acttcttcaa gtgctttgcc agaaattcaa catactctaa
       61 taaccatatc agagcactct tgaggtttat gtttaagaac aaatttctac aaaaatatca
      121 gtctgaaagt acatattttt cagtggtgca aggaccataa aaaaatgttt ttgtaatgag
      181 acagcatttt ctttcctcat gtgaaacact ggtgggaatc atgataaata aatacaatgc
      241 caggttagaa aaaatgttgt agtttcatgt tgttggtttg caaattgaat ttttacataa
      301 aatttacact aaatggaacc tcattataca gtgatgaggt ccagtatgat ccaaatcatt
      361 aaaatcactg tactgcttaa tgattcacta agtgatactg cagtgccata aatttagcac
      421 tagtttcatg attcaaaaca ccagactgag acaccagcaa atcgtatgtg gatcattaaa
      481 tttacaatga atgtcagaga tgaaataagg gggaaaaaac actttgagag atagggataa
      541 tatgtgctct aaggtgacat ccatcaagat aaatgatctt ataccactcg tgcttggata
      601 ataatagggg gctgtttttt tgttattctt tatttcgtaa tttctaaagg ggttggaagt
      661 ctaagcccct taagaattaa agtagctgtc a
//
LOCUS       KCKM01002094             965 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32942apa ultra-conserved element locus
            uce-5873, sequence.
ACCESSION   KCKM01002094
VERSION     KCKM01002094.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 965)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 965)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..965
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32942apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>965
                     /note="ultra-conserved element locus uce-5873"
BASE COUNT          366 a          173 c          167 g          259 t
ORIGIN      
        1 tggaagactg tagaatcctc agcagccact cttacctctg tcctgacaga caagaaacag
       61 atggtgcaat tttgcattat ggcaaaaagc aggtccctcc tcactgctgc agacggaaag
      121 gcttgaacac acaatgttat ttcacactca tgcttattaa ggtctataca ctcataatat
      181 ggatgacaca ttcatcatcc cgaagcaaaa atgtatcacg aacaagaagt acatatatac
      241 agaacctgca cctcaaaata ggccacttga agtttaagga gcagagatga tgccacaaag
      301 acagaaagcg tttataaaat ctttaaacat tagctacagc aaagtagcta caagaaatgc
      361 cctcagagat agaaaatcta agaaaaatag tactggcatc taattacagc agtagagttt
      421 gctgctttta tctgtaattg gactgtatag tctttcattc taatttactt tacatctaaa
      481 ctgtgataat caagacaagc agaacagaat ggcttgtaac tggctatacc accgacacca
      541 gttaatgcct aattataaca actaaattaa agaagggaca gtaaggaggt tgagtatcag
      601 tttgaaacat ttaattctgt agaaagaaat agagatttta aatcctacgt aaaaaaatca
      661 atattatggc tcattatatt ggtattgcta aacagattaa tgaaattaag tattttgttt
      721 tttaaagaaa agttctatca tgatgtaaag atagctttta acaaaagacc acaacagaga
      781 aggaaactca cattccagac caatttataa actaatctaa tctggaaaaa acagtaggtg
      841 gaattgactt tcccatgata tctctgagag ctgcggaaca ttttacatga ctgtggattt
      901 actgcagcat tctgaaaagt gtgcacatag tataaaacag aaagaaaaca ctggatccca
      961 caaaa
//
LOCUS       KCKM01002095             965 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32957apa ultra-conserved element locus
            uce-3946, sequence.
ACCESSION   KCKM01002095
VERSION     KCKM01002095.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 965)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 965)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..965
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32957apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>965
                     /note="ultra-conserved element locus uce-3946"
BASE COUNT          305 a          190 c          166 g          304 t
ORIGIN      
        1 tcagatttca attcttctaa atatatttta agatacacag cttctctaaa atgagaggaa
       61 ataaaatttc tcattctttt aaaggctgtg tacaggaatg gattttcaca atgatgaaca
      121 gccttatcag ggtgaaagat cctcagctga aagctcacaa agggacccct ctgtcccttc
      181 tccatttttt catttccact cttctcttga aaggggtctc tcaccagaga acctgaagaa
      241 agattttaaa gtataggact gaaatccatc aaacccagga ctgcggtcca aacccaacca
      301 gctgtcaaac ccagagatat gaatgtatgc tcacttctgc ctaataaaat ttgaatcaaa
      361 cactttgcat ctgattctcc atgtgagctt ttatgcaaac ttctaaagtg caaggaatcc
      421 tggggtggaa gagctattct gagagctttc acatagttca tgtaattagg gaaaccactt
      481 cctttgattg taagtgttca aaacagctga atttcttctt tcaaaggagc tctgtgattt
      541 gggtcatctc ttttacttgc tctttcatgt ttctcaagat gagaggtgag actgtagagc
      601 acattattta aaaaaaaaaa agattccact ttttgtttta gggattgaac ctggactatt
      661 caaaaggttg tcatttggaa atctatcttt ctttccctcc ctctgtttcc tttctttcct
      721 gataagctct tcagtggctt cagcgaatac agtccaaaat gccaatttaa acctagggga
      781 aaactgagat atggtatata aaggaaaaga aactcatttt cctttgtatg gttgcggctg
      841 aatatgtaat tataaaagag ctctagctac aggatctcag tccctatgtc acatttactt
      901 tttcaatggt tctaaacact gaccaagcaa aaagacagaa atacaaattt taaaagacaa
      961 ataaa
//
LOCUS       KCKM01002096             401 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32971apa ultra-conserved element locus
            uce-4580, sequence.
ACCESSION   KCKM01002096
VERSION     KCKM01002096.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 401)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 401)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32971apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>401
                     /note="ultra-conserved element locus uce-4580"
BASE COUNT          130 a           70 c           90 g          111 t
ORIGIN      
        1 atatacagtc agtttattaa agcagggaca gagcaatctc taggcctttg gtcaatctag
       61 gttgctcagg gctgaggaat ttccatttaa aatatcgctt caggtgataa agactgattc
      121 aatagagatc ggctaataaa gaaagtgctg gaagcgacta ttaaattcta gcttctgtca
      181 gcttaacagc aaaaactttt aatgaggaaa ccattaaagt tgacctaatg aatcagaaat
      241 gcttttcctt gctggctaat tatagagtgc ctaggatatc tttcgacata tgtaatttag
      301 aaaatatgga cccgttgagt ccccctgctc tcgaagaaaa cctgttgcaa agcagaaaat
      361 gggaaaatgc tctctgggga ggatgcaggg tttgacacgg a
//
LOCUS       KCKM01002097             779 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 32985apa ultra-conserved element locus
            uce-7283, sequence.
ACCESSION   KCKM01002097
VERSION     KCKM01002097.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 779)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 779)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..779
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32985apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>779
                     /note="ultra-conserved element locus uce-7283"
BASE COUNT          258 a          149 c          148 g          224 t
ORIGIN      
        1 aggtagtata atggcaaaac tgacacaact tgatagctgt aaccttattt acattggctc
       61 tgacagtatt catcacatta taaagcagta ttaatagcat gttaattgaa ctgctaaatg
      121 caatcaacta ttaacattat cagtcgctgc tgcagtccac taatacagta tttactgaaa
      181 actaaagaaa gagaggtttt gcttaaaata ttgctgaaga agccaaaaga acaaaattaa
      241 gctgaccttt tgatagatgt ctgtttattg atttaaattc accattttgt gaacgatgtc
      301 gaagaggtct gttagaatag aagcatgtat aataacatga gctaaacaat ttttatttct
      361 ttgtgtgtca ttatggagag attgaagcaa gcttcaccta agtgtagtga tgcaaaaaaa
      421 ataatagtat ccagtctgga tgtgaaaaag cagaggaaaa caagagcttc atattaaagt
      481 gccttctagg tagctgacat gacgcatcta gtcagacgta aataatgaca gacggaaact
      541 atcatgaggt ctgtgaagca tcaacatgct gccatcattt tctttctaac cttgccttgc
      601 tagcagctct cagacttaca ggctgagaga tcatttaaaa agcaaatcct aatgatgctg
      661 cccactgtaa aaacagctag tgagattggc atcaatttag ctcagtttgg gaactcaggc
      721 tctcagccat tgctggcttc tgacacccca aatgggcgct ccctccctcc ttccccagc
//
LOCUS       KCKM01002098             581 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33001apa ultra-conserved element locus
            uce-1413, sequence.
ACCESSION   KCKM01002098
VERSION     KCKM01002098.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 581)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 581)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33001apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>581
                     /note="ultra-conserved element locus uce-1413"
BASE COUNT          223 a           98 c           84 g          176 t
ORIGIN      
        1 cataaccaaa ctgtgtttct ttttgaagta tgttatctaa attcaaattt gaagaaggtc
       61 attaaaaaaa tctgcctgtg attttaaagg agaacagttg aaatgtcatc ttcaaagtgg
      121 tggcaagaag gtacaatgtg cactcagaac aagttcctcc tcccagatat acacacacgc
      181 agacaaaccc tgccatatca taccatacaa acaattttaa ttgtgtagtt acagtcaata
      241 accactccta gtcagaacat ttctgcataa agaaaattgt gatacactta taaaaacagc
      301 cagctgtaac aaaataactg gtgttttcat agcaataaac tcataaaaaa gaaatacacc
      361 tttatacaga aaatttatac agctgtagct ttaaaattga ttgtaaacca aaggaagaca
      421 cattgcaaac atcaattatt ttcacattaa ttgcataagt ttctaaggtg atctattagt
      481 tttatttacc taagcttatt tgcatgatag taaaaattgc atacaacaat aagagtgaag
      541 cttatagtat gaattgcttg gataacatag agcacttttt a
//
LOCUS       KCKM01002099             963 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33015apa ultra-conserved element locus
            uce-3244, sequence.
ACCESSION   KCKM01002099
VERSION     KCKM01002099.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 963)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 963)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..963
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33015apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>963
                     /note="ultra-conserved element locus uce-3244"
BASE COUNT          291 a          202 c          178 g          292 t
ORIGIN      
        1 tacatctttt atataaagtg tgcctataat agaggtaatg gtttcacttt ccgaaaccct
       61 gtgcaaaatt cgacattaga tatactattt gatattcaca caaccaccag cagaagcctg
      121 catcaggtgc ccatcagcaa aatgcaagtc acttgcttac agttagtaag gttttggttt
      181 ttgttatttt tcttctgctt ttttttctcc cttttttccc cttcctttct taagaagaag
      241 aacttttggc ccaggagcaa aaatgcagta accctcatgt aagcattagt ttattgtgta
      301 ccaaagaaaa ttacatcctt gaggtcttgg aaggcacagt tatacccatt ttgcatatat
      361 attgtgcatt acttggggag ctgggtgggc agaaagactg tgttgtacgt atttgttctg
      421 gctattgttt atgtaggtct gactgaatga aggaacagtg ggtatcattt caatttctga
      481 tgtcaacatc aaattactta tttaatttca tgcctggcga agcattgtat agctacacgc
      541 agaatcattt cacttcattt gttatgctgt gttttcttgg cgattggctt gccttccaac
      601 tgacagcttt aattacgaca tgaatttgat tgcactgccg aggaattaac ataatgcaac
      661 aaaacattta agcacccaac cttagacaca caaacacaca catacacacc ctcgcataca
      721 cacacaaaaa agcagccact gcagccgact ggcttctggc acacagacac acaaacaaac
      781 acagagcttt actggtgtta ttccactgta gatacagcca agattaccaa ggatattctg
      841 gagaaggaaa agtactaagg atttcagagc atataaccca aagattgttc ctcaaattgt
      901 cttccttcgg gctccgtaca caagtgggag gaatgagaga attgaaaaca tcccatatta
      961 gag
//
LOCUS       KCKM01002100            1378 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33031apa ultra-conserved element locus
            uce-1806, sequence.
ACCESSION   KCKM01002100
VERSION     KCKM01002100.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1378)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1378)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1378
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33031apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1378
                     /note="ultra-conserved element locus uce-1806"
BASE COUNT          469 a          258 c          238 g          413 t
ORIGIN      
        1 accttaatat gtggaaataa ggagggatta tttctttgat taagaatttt acaatataaa
       61 ttgagaagag acaggctgaa ggttccaaat aggcatacaa aaccccccat ctcctgctcg
      121 ttttcgtagt tagttcatta catctcctcg gtggggtatt ccccaccagc agaatgactg
      181 ctttgggtca tttttccatt cttgagtgca caaagagtgc aagactgttg ccattatgta
      241 cctagatgga tacaaaaacc cttcttagtt caaagaagaa agtacgtgaa accactgggg
      301 ttttcacagc ttctcagaat atcttaatca aaacgaaaga catgaacttt ttaacgtggt
      361 caaagggaac tttaaaacag cagtatggac ctgaaaagtt tgaatctgtt ttcctcaccc
      421 tgtataacca actcaaatgc ttcaagccct tttaactcgt tgctaaatgt ttatctacac
      481 atgctgtcag aaataacctt gttaggaagg tgaagttggt gtctcagcaa atcagaccca
      541 tggagtaggc gttgagtggc ctgtgactcg ctttcctttt tctctttcag caccatcaaa
      601 aggaaaagtg agaaaaacag cacaaacatt agttaaagcc tgaatttaat cccatgtcct
      661 acaggaacaa tttcattaca acgaaagcag acagacagta tctgtagggt tttttttgct
      721 ctgtttttgc ttaagcagtg atatttatat aacatagcct acagctctcc caaagattgc
      781 ggttaacaat ccctttaatt aaacgattaa taggaaatgc aggggcggtt cttacgaatt
      841 acctgattta ccatcactga agacagattc ttttaaaaat ggctacaaat gccttgttca
      901 caaaagactt tattatctaa tgatgcatac tgaaaacata cagaaatctg catggtccac
      961 tttacatgca gcagaacaat cttcacttta cagtaagtaa gtgtcaactg ttttatgcaa
     1021 gagacaacac tttaaagtca catttcttaa agaaaagcct catttacaaa agaaataaaa
     1081 ggtaaagaag caattaccgc ttttaaaaag cagctgcttt gttcaagagt ggaaggttta
     1141 tgcctgtatt gaaagacaac atgatcacaa aaaatgaaaa caatgaacaa atttttagca
     1201 taaagcagta cactttcaaa atgacataca aatagttaaa aatttcttta tgttgtctat
     1261 ctgtccttta gatataaggt ctttcgaatg agatcccaac gtacgtattt actaaatgaa
     1321 aactcttctg tatcggttct atgtcatagt gaactgtatt taacaaaatg tatacaaa
//
LOCUS       KCKM01002101             791 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33047apa ultra-conserved element locus
            uce-6674, sequence.
ACCESSION   KCKM01002101
VERSION     KCKM01002101.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 791)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 791)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..791
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33047apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>791
                     /note="ultra-conserved element locus uce-6674"
BASE COUNT          259 a          132 c          162 g          238 t
ORIGIN      
        1 ggggaggcag aatcgggtcc tgtagaagct gctgctgaga cagtaagctt gcaaggagct
       61 gctgggggcg agtgtgccca tttctgaatc gcacttatgg atgttttgca gtgaaaacag
      121 gaaagcagaa acatgtttca tatctgacta aaaataaagg tactcttaaa cttgtaaaag
      181 acaacatttt tatttgaatg atatgacaga gctgccacag gagtgttacc tgctataaag
      241 aaggcgtaag aattattacc tttattagac cagtgacact gagctttagc catacatttc
      301 taacttctgt ccctctacag agacaatttt cttttcttaa ataaactgtc atgctagtgt
      361 taatatattg ttggctccct catactctga gaatactgct gatataaaac atgtatatgt
      421 tagattggta atagtatctt tagtgtagct gactagaaca aatgtgtttc cctcatggct
      481 gtgctaatgt gataaaggaa aattggctgt tcatcagctt ttggctgggt aaagacagta
      541 gagatggaac cacattcttt tttatgcatt aataccactg agaacttttc actagttata
      601 tttcatgtgc gggcatgttg tgcaaagatg ttgtaaaaca tgagataatg ctacaaataa
      661 caaagtagaa aagcctgtat cttttatgat gataacagtc aaacaccaaa tgacagtaac
      721 aggctgtaaa aaatgtgatg cagaaaaaaa atgcgatgta accaccatat acacatatac
      781 ttagactctt g
//
LOCUS       KCKM01002102             498 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33062apa ultra-conserved element locus
            uce-93, sequence.
ACCESSION   KCKM01002102
VERSION     KCKM01002102.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 498)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 498)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33062apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>498
                     /note="ultra-conserved element locus uce-93"
BASE COUNT          116 a          142 c          103 g          137 t
ORIGIN      
        1 gccccctttc cccactggaa accctgtaaa tctccccttt tacaagccca aaacctacag
       61 ccggcaattc ttcccgttct gcgtgtcttt aatccgttta tttccaacag cttatggttg
      121 ggtttgccat ttttttttgt tggtcctcga gcagccaagt tcacctaggc tgcagcacca
      181 cacttacatg cccggcatct gaagttcctg ctctgggatc tttgggcgac accaggccca
      241 tgttatctaa ggaactgctg agctcattca tctccttttc acggcccgct tccttttatt
      301 tttagccaaa tccgtcaggc ctgacaggcg ggtaatttga gccagagaaa gggcaaagct
      361 ccaggtcctt tccacaaagc aattcttctc ctccctcctg ggaaggctcc aaacttggcc
      421 tgctccaggc agatggattt gttgagtcat gtgagatcat ttacacaaaa acacagcgag
      481 gcagtgaaaa ggaaaaaa
//
LOCUS       KCKM01002103             274 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33078apa ultra-conserved element locus
            uce-5356, sequence.
ACCESSION   KCKM01002103
VERSION     KCKM01002103.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 274)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 274)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33078apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>274
                     /note="ultra-conserved element locus uce-5356"
BASE COUNT           79 a           65 c           45 g           85 t
ORIGIN      
        1 ggacctaaac gcctgagtct cctggtgagc ccctcggagc ttactcatcc gctaccaaac
       61 atgagacagt tgacaggttt ttaactgatg aactcctatg ggtcacatta cttaattata
      121 cagtacatcc agggatacgc acatgggtct tttatggtaa atgatatgac tgtcttaaaa
      181 actcattaat atgtcattaa ccaagcagac atttactaat taaacaatta gcccctctct
      241 tctattcctt tgttccactc agagatgctc attt
//
LOCUS       KCKM01002104             961 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33093apa ultra-conserved element locus
            uce-6752, sequence.
ACCESSION   KCKM01002104
VERSION     KCKM01002104.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 961)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 961)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..961
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33093apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>961
                     /note="ultra-conserved element locus uce-6752"
BASE COUNT          284 a          191 c          204 g          282 t
ORIGIN      
        1 cagcattgag taattccatc ctatcaccag gaatccattt taaaagctaa gacagatggc
       61 agcagaatgc accatgccca ctttcacacc ttttcagagt gataactatg tgctcatttt
      121 gtagactctg aactataact gctttcagtg cagcgacaca ataaatcatc acaacaaagg
      181 cagaaattta gtacagtacg aggagagaga gaggagaaaa aaaagtactg ttctcagtat
      241 ctaatgcaga tcataccatt ggatgtcacg gttcgtgttt gattttggaa cgttttggag
      301 cgagttccgt attgccctga aaaatggcta gcttggggtg acaattcatt ccatgcaccg
      361 ctctgtgacg gatgaaggct ggcctgggac tctgcagggg gattcaggcg ctgggcccag
      421 gctaaatcta aatcttgggg ctcttccttc agtttttctc cttctttgcc aactcgttga
      481 tagattcttc cagtgctgtc attcagtaat cttctcatcc ctgtaatttg ttttttaatt
      541 tcccggcttt catctcctaa tgaaaacaga gccacagtta tcactgtaaa ttagcaaaaa
      601 acggtaatgg gtagagatta gtgattttag atgccagtaa gagttggagc acaaaaatga
      661 ataaatgaag acgagaaaga aaagagatgg ttgagcagtc attggcatgt accaacgcag
      721 tgatggttga cgtctctcat ggttgaatga cctgctgatc gtagccttct tgatgccgtt
      781 tctaaagctt tgatgagtaa aattattttt ctgcagaagg aaataataat agctacagca
      841 gtttcaaatc ttttaaaaga ctgatcctat tccagcactg acatcagtgg atattttcct
      901 caagtaaagc ctaaaggatc acaacattct atcactttgc tttgagctga aggatatatc
      961 c
//
LOCUS       KCKM01002105             906 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33109apa ultra-conserved element locus
            uce-4844, sequence.
ACCESSION   KCKM01002105
VERSION     KCKM01002105.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 906)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 906)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..906
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33109apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>906
                     /note="ultra-conserved element locus uce-4844"
BASE COUNT          297 a          137 c          204 g          268 t
ORIGIN      
        1 ttcacttgta actttatgtt ttttggaagt gacagtacat aaattccaag tcactcaatt
       61 tggttaggtg tccgtttttg aactaatcta catgctagaa tgttggattt catcattttt
      121 aatagaaaat tcttgtcttt taagaagcag ggtattaaaa aaaatgaaat tactttttta
      181 agatcagagt aaaaaaaaaa atcagtccaa tccatgtaaa ttttattaca agacttcggc
      241 aacaagcatt tgagtgctgc taaaatatta attggataga aatgaaaggg ctttgctagc
      301 tgataggata tcataatcat agctgcagta gtcgatggta aatgatgata aatggcatta
      361 ggaacctttt agcaaactgt aataactacg aggagggaag cagtatggat ttgcattata
      421 tctgataccc tctagtacca agtggattgc caatactgct tgtttagcat tttctaaggg
      481 caataggata ttgatttctg acttacaagg aacggctcta ttttcaccat tgaaaagtat
      541 tgcaggttgt taagaagaaa ttgacttgaa gaggcctgac tgctgcccat catggagcaa
      601 ataaagcaaa actgccgaag catggtggag cagcgagatg gggccctcag caatttgttg
      661 ctattaattt accatgcttg acagcaaatc gatcggcatc tacttcatct gctagagaaa
      721 atgctgtcca gagcagataa aaggccctgc gtggtagagg gaatagactg gattggccaa
      781 acggaggctg cagttaatgt gtaaataagt gaaatcaagg ccactgttgc cgagaaagct
      841 gtttttaatt aggctagggc tttatagtga gctatttaag aaagtagtat ggagagtaag
      901 gggaga
//
LOCUS       KCKM01002106             468 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33124apa ultra-conserved element locus
            uce-2145, sequence.
ACCESSION   KCKM01002106
VERSION     KCKM01002106.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 468)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 468)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33124apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>468
                     /note="ultra-conserved element locus uce-2145"
BASE COUNT          152 a           85 c           85 g          146 t
ORIGIN      
        1 agcttatggg tgattcagtt gcatcagagg cttttagact gatcaattct taatcacaaa
       61 gcgcaaaaat tattctcaga ctcatgtcag tttctttgga cacctttgtt aacaatctgc
      121 ttcaaatcat ttttttaaag aactgcagac actgttttta ttgactcccc acttgtaaaa
      181 tgtttatagc ttgttaattt atatttaccc ctttactttt gcctgcaaat caacatcact
      241 tagcacagtt tggttacact ttgtccaaag gaaattacag aagcctgcta tggggctaaa
      301 atgaaggaaa gctgaggaaa atcaatacac tgatgattaa acagatcgta gcaaattcac
      361 ggctgtaagc tgcagcatgg agacatcagt gtgatgccta tctagcagtt aatgtgcttt
      421 caggcagttg aggaaaattt tacaataagg caaaatgtaa cagaaaaa
//
LOCUS       KCKM01002107             621 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33140apa ultra-conserved element locus
            uce-5114, sequence.
ACCESSION   KCKM01002107
VERSION     KCKM01002107.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 621)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 621)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..621
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33140apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>621
                     /note="ultra-conserved element locus uce-5114"
BASE COUNT          219 a          113 c          107 g          182 t
ORIGIN      
        1 gactaccatt aaggaaaaaa ataacagtca ccagtagatg tctgcctatg aacagagctg
       61 ggatgaaaag tgaaagaaat cccacttttt gttagcccaa ttgtaaaaaa aaaacacaca
      121 gaaagaatca actagctata aggaacaaag taagtgatct cttcccatta taatcaggac
      181 acagagcttg tgatatctct gggagctcaa tctaaataac gtcctatcct ctcgtctctt
      241 tcacattatg aataaaaaca tgaaattagt tttatgtcag aagaacaacc cttaagacac
      301 ttgtaactta taattataat ttctaagctg tttggcttgt cagtatcaag gaattcacag
      361 cccaggactt ccaggatttt ataggctgag acatgctgtg ctagctactg aaaattaact
      421 atgaatctct catctgcatc ctgatttatt aactacagtg agaaacagaa agttaaaaaa
      481 tgtactgtat gtgcatagcc tgctagcgta gaagaagcca ttaactatac tcagtaaagt
      541 actagcaatc gatacgtgta gggggattct tcctgcagat gtattttggt ttttttcctc
      601 taaataaata ttgcaaaatt t
//
LOCUS       KCKM01002108             673 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33154apa ultra-conserved element locus
            uce-1148, sequence.
ACCESSION   KCKM01002108
VERSION     KCKM01002108.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 673)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 673)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..673
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33154apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>673
                     /note="ultra-conserved element locus uce-1148"
BASE COUNT          243 a          137 c          106 g          187 t
ORIGIN      
        1 acagcactta taattacaca tgcacaaaca tgattaaaat tagtattact gtagatatca
       61 aaagcaaaca gacctaatta aagaaataac tgcaacaaac ccagatgcaa cccaaaacaa
      121 aaaaggacaa ctccaaatct aatgaatcct ttgaatatta attacagaat tcctaacaat
      181 acactgagaa agctctcttg gagaattcag tttactgttt aacagtttct gactaatttt
      241 attaacctgt acatctgaga ggatcaaccc cctctgggtt taattagaag aaaattcaat
      301 ttaaatctaa atgtcaacag tggttactaa ttatggcagg gccctggacg agacatccag
      361 tctgtaatca ggcagttctc tgctaacaat tgtttctttc tgagttatga gtgcattagg
      421 attttccttt ttctaaataa atatgattca gcatgggaca cgactaatat taagagcacc
      481 tactgctagg tgcagacatg cagaagaggt tgccaaatta aattacaggg atttctcaaa
      541 catatagctg aataataagc agctacaaaa ctaggtcagg gtcgcaagca gtcgaccaca
      601 gcccctcccc ccaacatgca aaataaatat acccactatc tctgaataga aatcagtctt
      661 ttgttatgtc ctt
//
LOCUS       KCKM01002109             402 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33169apa ultra-conserved element locus
            uce-4141, sequence.
ACCESSION   KCKM01002109
VERSION     KCKM01002109.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 402)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 402)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33169apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>402
                     /note="ultra-conserved element locus uce-4141"
BASE COUNT          145 a           81 c           53 g          123 t
ORIGIN      
        1 acatgataat tcctgacagc tgctgcttga gcacaagtta aattgaacag tttatctcag
       61 cataaagatg ttataaggtt ttatgtttaa tttaaaaaaa ttaacataaa acccagagaa
      121 agcagagtta ggcaatcttt cacaaacatg acatactaca atcactgtat aagctggatt
      181 agtacttatt accatgctac tagagaatta agctgttttt agaccaccaa agacctttaa
      241 attgcaactt ttgtctctgt aagagaaacc tatatttaaa acgtctgcta aattcaaatt
      301 aacagctaca tcattaactt accatctcgc aaaatccccc atatttcaac tgctattatg
      361 gcattcttat caagacctat cgccgctgca acgcataata ta
//
LOCUS       KCKM01002110             856 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33184apa ultra-conserved element locus
            uce-6587, sequence.
ACCESSION   KCKM01002110
VERSION     KCKM01002110.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 856)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 856)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..856
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33184apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>856
                     /note="ultra-conserved element locus uce-6587"
BASE COUNT          251 a          165 c          173 g          267 t
ORIGIN      
        1 agcagacagt acttactggc tgcccaagtt caggcattaa aaaatggcat atcctgaaat
       61 gtagaaagct ttgaagggcc gttcccaata ttagtggttg ttttgaaaaa atattgccaa
      121 cagtgaagag ggtctgaaat ggcaatggga tttttcctgc atcagccatt tttataccaa
      181 gtttttatat caagtgctta aaaaaaatgt gttagcgcat aaactcttct gaaaagtgaa
      241 gactaattta ttatcatgtc attattagca caatcacaaa aagggtcact ggtctttcct
      301 ttaatttctg tcacaggctg caggccgcat tatgctgaat caaggatatg ggaagataat
      361 taacacagca tctatggcaa gtttaatagg tgagtgatga gagctaacag ttgtgcttca
      421 gaatccatat tttaattact accgatgcta tttgaatcaa ttaaacctgt attgggaagg
      481 agtaaatcac tgacattttg tattagagga aatgtactac aaaattttta ttgatatcat
      541 ttttcaccat ttatctgtcc tctatgtttt agcacactta ttacttttta taggagaggt
      601 ggagtcacct tctctaactg ggatggcacc ggagaggtgc tgttgctctc cccggtcatt
      661 tcaggcaaac gtgggaagct gtgcccccat ttacaagctg cccaaagtct tttgcaccat
      721 tttttgcgct ggtacctgca ggttttattt cgttaccgtt accaacaggt gtctcgccca
      781 acgctgctga atcagcagtg tcgtcaaaag cgccaataaa ccattgtaac atatggaatg
      841 aaatccctac tgctga
//
LOCUS       KCKM01002111             962 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33200apa ultra-conserved element locus
            uce-1291, sequence.
ACCESSION   KCKM01002111
VERSION     KCKM01002111.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 962)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 962)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..962
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33200apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>962
                     /note="ultra-conserved element locus uce-1291"
BASE COUNT          273 a          178 c          190 g          321 t
ORIGIN      
        1 aatctcagca cgtgtgaagt tcactgcttg gaagggagat tggcacacta ctttgggcat
       61 tttatgcatg gtttttctgg ttaggttctt acagagtaag cttttcctct atcatatgct
      121 aagcagcata aaatatgagc tatcagtgtg aattgcaagt ttcgtagcct ttgctttgtg
      181 atcatttgca tattcagagc ctgccttggg ttttcttgtt tttattcttc ttttaaaatt
      241 gcatttacct gaagaacggc ttagttccga gtgcacaaaa taagcatttt ctctgcagtt
      301 gactttaatc ctaccaaaag aattaacact tagagcagaa aaccttcttt gggtcctaca
      361 gggcattaga acatctcagg tactggttgc tggtttaata aaagggtagg atttccattt
      421 acttcaggca ggcttaatgt attgttcttg tagtgagaca gtcagaatga gtcaggagcc
      481 aaagaataca ctttatagac acaaataatc gtaaattcag aatgtcacct ttaggcagag
      541 gcatttttat tattgttagt ggagctgctg agtaggtttg atgttttatt ctcttgagta
      601 ctaaatgttc cagagtacca cagccctatc tttatcaggc tcacaaggag ggagcacagc
      661 caaacttgct tcctatactt ctctatgatt gatagcagat ggcatgcttt aaaataaacc
      721 tatccattag cagtcctcag tgtttttact caaggcattt acaactgtct caaccagaaa
      781 acacattcac tccacaagct agtttcagtc tgcaacagct gtacaggtgc aaatctttca
      841 ttaactctta aaccgtgcag aaataaagac tgcgctgtat tttactttta gtagagaggc
      901 tgttcttcaa agaaggagtt aatgtgttaa taaatactaa gataggggga ttttttcctt
      961 tt
//
LOCUS       KCKM01002112             514 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33216apa ultra-conserved element locus
            uce-4588, sequence.
ACCESSION   KCKM01002112
VERSION     KCKM01002112.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 514)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 514)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33216apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>514
                     /note="ultra-conserved element locus uce-4588"
BASE COUNT          165 a           87 c           98 g          164 t
ORIGIN      
        1 caatatttat agattgcacc actgtgattc attatcaaat aaagtccatt ttctgtggac
       61 ccaattgagt taaagaatat taaaatgaat tctaacttcc ttgttggtta tggaaaggca
      121 tcattttatt gacatcttta tttagcaaaa atgcctggag agatgtattt ggcaaataat
      181 attaccctta cagatctcat tgcttcagaa acatgatttc tctgaagaaa cactagatct
      241 tgtaacagaa atatctttaa atcttttaga tagccagtcc acagggaaag gtttaagaaa
      301 ggatcaaagc ttgtcctttc agcttgaatt attccattac agctgaatgt gacataatta
      361 caaaagatgt tggatgtgga atctcatcag gattatctga cactcatctt tgttgaaaaa
      421 gtctccccag ctgttgctct gatagcacaa atgtgacagg agtgcagagc acaaaagtag
      481 ttgcaagtga ccgctgcttt ggggctggtt tagg
//
LOCUS       KCKM01002113             792 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33231apa ultra-conserved element locus
            uce-1550, sequence.
ACCESSION   KCKM01002113
VERSION     KCKM01002113.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 792)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 792)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..792
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33231apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>792
                     /note="ultra-conserved element locus uce-1550"
BASE COUNT          275 a          132 c          129 g          256 t
ORIGIN      
        1 gtcctattta ttgttgtgga aagcagcaga gtggctttgt aaatttatag attaactcat
       61 ttaaaatcca agtttcaaat tatgttttcc cactttcatt atcctgggtt cccctaaata
      121 ccaatctaag tttcttgaaa tggcatgagc taccaatcag aatctcaaaa aaatatatat
      181 ctatataaat tgaaattgta atgagcctta ccagtgtatt gctagcactt tggttcattt
      241 gatatgaact ttgttttttt aaagtaccac atggtaaggc tttgaaactt cagtttgtaa
      301 aaaaaaactg taacagcctt acagcctttg aagtcactac tgatataact ctgaacagat
      361 ccattcaagt tcaactaaca tcagacaaat gtttagtgta tcagaggaag ccacaaaagc
      421 aaggatttca tcaatatttc acaacagcct cagggaaact gtagattgca atgctgtagg
      481 gcagctaatg gaattacaca caagggtttt gtacatttaa aataagcagc tactaaaaaa
      541 attacccttc agtttgatag aaactgtata aaattgcaga tgggaaacaa ttaaatagct
      601 accaacattt atccatgtca gcctgatagg tcatttaata acaggtattt cttcccttct
      661 ttcttttttt cctggtaggg caataataaa gattaacatt tatgaaaagt agcataaaat
      721 atagtacagc cagatgaata attaaagatg cttctgaaga atttgtttgc tattgtatgg
      781 ccatgaagac tg
//
LOCUS       KCKM01002114             357 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33247apa ultra-conserved element locus
            uce-1350, sequence.
ACCESSION   KCKM01002114
VERSION     KCKM01002114.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 357)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 357)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33247apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>357
                     /note="ultra-conserved element locus uce-1350"
BASE COUNT          128 a           58 c           45 g          126 t
ORIGIN      
        1 ttgtttttca aaacacctcc agatttgtct ttctttttaa tgttcttcac tttgcttctt
       61 agaaaagggg ttaaaattag taggcacatt tcatattagc gtatttcatg caataaagca
      121 taaattattt aaaataacac gaccttttat cttgcacctt ttgaaggaag caaattaaaa
      181 atgtaaattg ggagctaatt aatatgcaaa tgtattcatt cgcagttaac aattagcaat
      241 taaacctgca gtgtctacaa agagcacgga caaaattagt aacttaattt atcattaaaa
      301 aatgaaaacg tacacaaaat tttaattgac tttcaaaata tttcccctgc tttttcc
//
LOCUS       KCKM01002115            1089 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33262apa ultra-conserved element locus
            uce-6580, sequence.
ACCESSION   KCKM01002115
VERSION     KCKM01002115.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1089)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1089)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33262apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1089
                     /note="ultra-conserved element locus uce-6580"
BASE COUNT          291 a          241 c          208 g          349 t
ORIGIN      
        1 taaagagcgt aggcaactgc tcggcggcaa ctagccacat agctggagtg ttttccattc
       61 taggcaatat catactaatt tgatgcacac atggatgctt cacacaatct gcaaattcat
      121 cgctggcatc ttgcattagt catctgacag attgccaagt gtttcatatt cctttcatgt
      181 gactttatta caaaacacac gcacacacgc actgccttgt ttctgccagt agccacttca
      241 gtgagaattc actgcagttc tgtttacaac agccatggag agaaatctgc acttatttgc
      301 aactatgctc tgctttaaaa tgcaaaagtc ctggtttgcg ttgtgccgct ctcttcttat
      361 ataatgacat taagcagcag cctgcagaga aaaccagact caatgaaaaa tgtaatcgca
      421 ttgttttgct gttcacgata cttatgctat taattaaata ccgatttttt ttttctgctt
      481 tgtgccaatt gacatcatct tctgcatcta gcacacatgc aaactgcgta gcctcctgac
      541 ttgccttctc tttttaatct ccttttccac tttctagtaa cggcacagct aacaagatga
      601 atggagcttt ggatcattca gaccaaccag acccagatgc cattaagatg ttcgttggac
      661 agattccccg ttcgtggtca gaaaaagagt taaaagaact ttttgagcct tatggagctg
      721 tctaccagat taatgttctc cgagacagaa gtcaaaaccc tccccaaagt aaaggtacag
      781 tagttgtgct ctctttgctc tcaatttgtt tggttttttc tgatgatctt gcttgccttc
      841 aggatttcca aagagatttg gattggggct ctctgttctg aagcatgtgt tgaggtatgc
      901 agcagtccta agaggggaag actcctgaat acttatcgat tactgtcttc ctcttcttct
      961 taaattgcgg tttaaatatc tgttatctga aagcgtgtgt tccaactgtg cagaaataac
     1021 aaaagattgc cgtccttgtt taaattatta ttggcaagaa acatggaaac ctgagcggtc
     1081 actttcctg
//
LOCUS       KCKM01002116             227 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33277apa ultra-conserved element locus
            uce-66, sequence.
ACCESSION   KCKM01002116
VERSION     KCKM01002116.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 227)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 227)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33277apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>227
                     /note="ultra-conserved element locus uce-66"
BASE COUNT           79 a           41 c           24 g           83 t
ORIGIN      
        1 gctaattgtc atttctatac agtagcactg cacgacgata cattttaaca atctataaat
       61 aattgataat tttttttctt tcatcttcct tcctagtttg cataaaacta atgacttggt
      121 aaatgttact cacttcaaaa tattccactg ctcctatgaa aattaaacta acactgtaac
      181 cttagcaaat aaggagattt cttttcttat tgtaggctaa aaaaaaa
//
LOCUS       KCKM01002117             818 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33293apa ultra-conserved element locus
            uce-5609, sequence.
ACCESSION   KCKM01002117
VERSION     KCKM01002117.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 818)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 818)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..818
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33293apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>818
                     /note="ultra-conserved element locus uce-5609"
BASE COUNT          261 a          135 c          118 g          304 t
ORIGIN      
        1 tatatgatta tttttatgtc atagcaaatg aatatttgca gagacaaagt atttgatctg
       61 ataacagagg ttcacttgaa agaatcaagg ttattttatg tcattttttt ccttgcccta
      121 tataagatgc atttaattat ctcatgctat ctcactctac tcaaattaat ctgtctcata
      181 tatattgttg ctcaaattag aataattctt taatcagctg tgttatgcat gccatagtag
      241 actagaatag gaaagctact cacagcatac tgacgatgca tgtattttat ttgttattgt
      301 aatttaaaag taaaatcaga aatattgatt tctacttgac tggagagatg atttagtttg
      361 aatatcagac cgatcttaat caggtgagaa ttaattgagt tggaggtatt agatattcag
      421 tgatgttaac tgaaccatga tcaatctaca gagaagcttt cttttgtact gtgttggaaa
      481 taacaagtag cttatactct acaatgtaaa acaatctttt catgttcatc ctactacttc
      541 ctctggctca ttaaatgctc tagtaatctg ttctgtgcat actgagtaat cttcaaagta
      601 acaagctagt aaatcacaat tgaatacaaa attaaaatca taataacttt accataaaaa
      661 gctgctgata atattttata ttgttttaat gtttttgtat gcattttaca agcatacatt
      721 tttaaatctt gtccttgttc acattttaaa gggaactgtc atcctccttc caccataacc
      781 ctcaaatccc ctttgtggct tgggtatctc ttctccac
//
LOCUS       KCKM01002118            1020 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33309apa ultra-conserved element locus
            uce-646, sequence.
ACCESSION   KCKM01002118
VERSION     KCKM01002118.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1020)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1020)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1020
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33309apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1020
                     /note="ultra-conserved element locus uce-646"
BASE COUNT          343 a          155 c          209 g          313 t
ORIGIN      
        1 ccagatgtga aatccatgga agtgatgcat ttcaggggtt aatgagactg ctatgttcca
       61 ccagacaatt atagatgcca tgtactttca gtgttctata tatgaccagc aaagaggaaa
      121 aagaaaaaga ctattaaatc ctgccaatga tttctcacag gctgtttgct gaggggtatt
      181 cttacatcag tcaaaggctg atatgaaatc tatatctttg cttcaaaaat gcaccttctc
      241 ccttcactga gagagtgaga agagattgta ttttaagtaa aatatggtga ggagtagaga
      301 aaaaaatgtt tcacttaatc tgaattatat ctggtatttc agaatacatg tgctcattac
      361 taagcataat aaaatttggc attttctatt gtcagagggt ttataaaggc taaatttctt
      421 gatttattta aatagacaga taggaaagag caaactacaa aaacaagtgc tatatactga
      481 aggcatgtga attacctcct tcccaaggat aatgcaaatt agaagtatgt aaagctttgt
      541 ctgcacctgg gatctttaat gaggataaag aaaaatcaga cggagattct cctgggagaa
      601 gagaggatcg ttatttgaat aacctgcagt gaattctaat caatgcaacg tgactttgaa
      661 aatgaatgtg gtctttcaac ctgctgtaca tgagccataa tattaatcat aacttcatgg
      721 tacagtaaag cccatgacaa atggttattc agtggactaa cgaaaagact gttgatagtg
      781 ggaggaaggt gagggccata tatccagtat tttttttgtt ttgtttgaaa aatcatctgc
      841 ctaaatgtat aaatatatat atgcatatat gtgagcatat gtgtgagtgc acacacgtgt
      901 gcatatgtac gtgcccccag ttaagaatgt agacatgaaa taagttcttt tccttcagga
      961 gtaacacgaa gaaggagtgt cttatcctgt tatgcttcaa agaatattgt ctagtgttac
//
LOCUS       KCKM01002119             956 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33324apa ultra-conserved element locus
            uce-5319, sequence.
ACCESSION   KCKM01002119
VERSION     KCKM01002119.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 956)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 956)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..956
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33324apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>956
                     /note="ultra-conserved element locus uce-5319"
BASE COUNT          256 a          195 c          195 g          310 t
ORIGIN      
        1 aacttgcaga tgctttttta atctaacttt gtgagaaagg ctctgacact gaatttgaag
       61 gaggtatgac tagactcttc aggcatttga acgctttcac catttataga tttcatctca
      121 tgttgcaaat tcccaccaag gcgctgttat tttatttttc taactttgaa accaaaatct
      181 gttcttcagc ctagggggag gccttcatgc tgcaatcctg gttcttagct gcttgtaata
      241 ttctttcagc caatacctct agcagtcttt ctgtgcatac atttatattc ctctgttttg
      301 ttcctgcaga tgcagttgag gtggttggtt tcttctctcc ctccttctct agtgcaattc
      361 cttaaggcat taccttcctc tccaggcaaa taaatgcctt gaggcaagca gacgtcactg
      421 ttgtggtctc gtttgcatgg gaaattgtca ggcctgatct gacctgcctt tccatcagga
      481 ttataaaggt gacggatagt caatttcagg gattcatgat ccattttagc acagcgcttc
      541 accttacagc taagtaatac ggctgtgata aaatcagctg taatcactgc atcttactca
      601 gcactgcctt ggctgtaaat attaccttca tatatttaaa gaaagaaaga gaaatactca
      661 gatggaagga aaacaaaaaa gagatctaaa gagaaaaggt cggttgatat gtctgaccag
      721 agcggtattt cctctgatgc tgtagtattt ttgaaggagg taggttcctt gcagttcgaa
      781 ggaggcagtg tcagatgcac acctgaaaca ttgcccatta acgtgggatg gttcactagc
      841 agaactaggc ctgaaatgta tgctgctcga gcagctaatg aactttaggg atccttcatc
      901 tttattacaa gtgtttcaaa tcctgaacat ttattaaatt atttgctcta agtttg
//
LOCUS       KCKM01002120             894 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33338apa ultra-conserved element locus
            uce-5806, sequence.
ACCESSION   KCKM01002120
VERSION     KCKM01002120.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 894)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 894)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..894
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33338apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>894
                     /note="ultra-conserved element locus uce-5806"
BASE COUNT          289 a          182 c          173 g          250 t
ORIGIN      
        1 ttctactgta aaatagttct aaaaacatgt ctagaaagcg atgtctaatt tcaaaagtta
       61 gtgttcctgg tgaaaaaaaa ataaaagctc cacatagctc cagaaccata ggcttgcctt
      121 acgctgcttg ccacgagaag accttgtcct cgtttttaca agcaagtacc agacctgacc
      181 tgttagtcca tttatgtaaa taataagtcc aattcccatc gcaaggccct gctaaagctg
      241 tgccattaga gctatcgtgt catttagaca gtcagtggag aatcaaaagc tgcctgtgct
      301 gcagcagccc actgctatgt ttctaagaaa atgggctctt aaaaaaggaa atgtcacacc
      361 acagtgtgag agataaacag aggtatatct ttagagcagc aagcagggat ggtagaaaca
      421 ctctctgtaa atgactttga tcccctagtg tgatgaatca tggagtcgca aatccttttt
      481 agctaattgc tatcagcttg tgagattttt ccttccatgt tcaatatcaa ttttcagggc
      541 cataggagat agcgcttctc cccggagtct gctggcgact tactgctaaa actgagctag
      601 caccacttaa cagtttaaag ggggaagtca tttaatacga cactgctgct agtaactaaa
      661 agggaaaaat attaggggca aatatactga atagtaaacc gttctaatgt caatgacctt
      721 cctttgaaaa ccatcctttc cataaccgca tagtgtcagt gcagcgatct cagaaaacct
      781 ttaattattc aaaactgata agctaggact tgggaaaaag gagagtgaaa tttggttatt
      841 tttcagtcct aatgacttca tgattaaaaa ctgaaaaaac tcccaacttt ttaa
//
LOCUS       KCKM01002121             794 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33354apa ultra-conserved element locus
            uce-3247, sequence.
ACCESSION   KCKM01002121
VERSION     KCKM01002121.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 794)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 794)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..794
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33354apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>794
                     /note="ultra-conserved element locus uce-3247"
BASE COUNT          228 a          137 c          180 g          249 t
ORIGIN      
        1 gaagagctgt gtgacaaaaa gctgagttgc taacacgctc ataacttcat aatggaaaac
       61 attttcttaa agctatttgc atagagaaaa atgggaaata gtgtgtgact acccacaggg
      121 gttagaaacg tgaatgctta ttggagtaaa aggaacttga caggctacaa aattcctgct
      181 catgcattca gtgctgttac ggtcccagca cacactctca cacacgtatc tgcaagcaga
      241 aaagatgtga tacgtcagag aagctcttgc tgtttgccag aggtcttaag atgagcttct
      301 atttcattcg gtagtaatgc cctttttgtt gacaaaagta aattgatgac aggcaagagg
      361 gaagcatttg gtggaaaaat tctgttgacc cttctcagat tgaatttgac cacagaacag
      421 gataccagca gttgcagaaa tgatagatta ttgtaatgac cggcagaatg gccttttggc
      481 atgtttaaat ggcaataaat ttcactagga agagggcaat ttaactactt tagggcagtg
      541 aggatactct ttgtttgagg tgtaaataaa ttgcggttca ttaacagtgc acatattacg
      601 ttcctggtgc aactctaaag caggggatgt taatatttaa tttaatttaa gcaggtatgc
      661 tttgcctgtt tgatgtttgg gtttgttttt gttgttttgg gttttttttc tttttttcct
      721 ccaggtatca gtaactttgg gcaacagttt ttcagtggcc ctttaacccc cgaaggccca
      781 tatgtgcaca gctc
//
LOCUS       KCKM01002122             515 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33370apa ultra-conserved element locus
            uce-3625, sequence.
ACCESSION   KCKM01002122
VERSION     KCKM01002122.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 515)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 515)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33370apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>515
                     /note="ultra-conserved element locus uce-3625"
BASE COUNT          130 a          118 c          118 g          149 t
ORIGIN      
        1 cattggattt tatggttttt tttgttattg tggtgggttt tttgttgttt ttttttttta
       61 aacctgtatt ccactggagc tcacaattag cagccaggcc tctgggacct aattaaccaa
      121 ttcaattaac aaaaaaagca tacaagtcac cctgacattt gtcagccatt aggagggatg
      181 tcaggctggc aggttctacc aacacattaa tgatgattag ctcatttgca gctcactttt
      241 accccaggtg tccacctgga gagactggca cgaaacacac agcagacagg gagaggggct
      301 ggggctggga agagctttac cacaagtgtg gtgaccctca aagggagttt tgacctttta
      361 ttgaacgtat aatcaataag ttttttgcct cagttaagag aagctgctgt cccctcatct
      421 ggctcctgcg ctcactaacc ttcagaagag cgctcgccca aagaggtggg ggaccaactc
      481 ttgccccagg ggccaaaacc ccttgttttt caact
//
LOCUS       KCKM01002123            1096 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33384apa ultra-conserved element locus
            uce-5053, sequence.
ACCESSION   KCKM01002123
VERSION     KCKM01002123.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1096)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1096)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1096
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33384apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1096
                     /note="ultra-conserved element locus uce-5053"
BASE COUNT          339 a          217 c          186 g          354 t
ORIGIN      
        1 gaaagttact atcccttaag tcatttgaga gaatggaaag ccagaattaa tgtctaatta
       61 tgtttagttt agtcggagca tgcaaaattc atatctcatt tacctaccca catgcagtta
      121 ctattcccat aagagacact aaagagaaat tagagctttt tgcaaatacc agcctagaga
      181 gtttcacttt acagaagtac ttcacaaaaa ctcctttgta accatgatgg aaaaacctaa
      241 ggattttttt caatcacatc acagctcact gactgtaaaa gtttttgttt tggtttgggg
      301 tttcccccct gcctttttta aagcctttct aacattggct attaaggagt tctcactttt
      361 tatcacttta taagggaaaa acagctcagt ttatcttttg cttattttct ggagcctgca
      421 ggaagcctct gccatccgaa agaaagtcat acataataga gcagctttag cccagtaagc
      481 ccgtctttcc caattcatca gtcaaagtgt tatgcaagtg gccccctaaa ttgataaatt
      541 cccacagtgc ctgttgaccc agctgccaag tgctcatgca gcaggtgttg ttttcatgac
      601 caccctgaca gtaatacaaa ctgtttagca gttgcattga cctcttagct attaacattg
      661 atacaggctt cactagggac tagttttcaa acatgacaga atttcttaag actagaggtc
      721 atgaacaagt ataccatata agaataaatt tgatatgctg ctgagtttaa atcttgaaag
      781 ccgtgagttt tttccacatt attcccatgc agtaaatctg gagacaagta acgagctttt
      841 ggcatctctc ccaggactaa aggtatactt tttaatttta gaagctgtac ctgaagagat
      901 gctatattca ttctatgaca agtagtaaat ttagtctatg acaagtagtg aaggaacatt
      961 ttttttcttg acattttctc ttataaagga aaacaccaaa caactaatgc acaaattttg
     1021 gtgatatact taagcatcat tccgatacct agtatgttgt gtacagttaa ttgaagcatg
     1081 actttcttcc catata
//
LOCUS       KCKM01002124             822 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33399apa ultra-conserved element locus
            uce-6288, sequence.
ACCESSION   KCKM01002124
VERSION     KCKM01002124.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 822)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 822)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..822
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33399apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>822
                     /note="ultra-conserved element locus uce-6288"
BASE COUNT          280 a          145 c          180 g          217 t
ORIGIN      
        1 gcgcttggtt agaaataaag taagtggaga gtcacaacgg agagaggcag ggaatcgcaa
       61 gagaatttcc ataaagaaag ttggtgtact tccagaggca tacaacgggc tattttaaaa
      121 gctgacatcg agagagagag caagatacgg aaaatcagag caaagtagtt agaatcctgt
      181 gtgtaaaagc cgcaggtgat tcttaatagg cagtaaatta gctgaaggat agagtactta
      241 tttttgtggc aatagcaatg ctttcatttt ccagcaagtt tttaaaaaat taactgaaaa
      301 gtgatgcaaa gaataggggg ataattgtga attaggagcc aaattatgcc aggcacaact
      361 gaataagttc tgacttttct tactgacaga catgtatatt aatagttggc acttattgaa
      421 ccaaatatga atattcatct tcatttatat ttcaaggcct ttcattcctc aaggaccaca
      481 gtgcttttga ccaattttca tccacattac taaaatgaca gctttcactc ctgggccctg
      541 acagaggtct gcagaattca ttggaggtcc tgggaggagg gaaccagctc ccgctcccag
      601 ctgtccacaa acactcatta agagaggcaa atatccagca gaatctctgt gagaattttt
      661 aatcacgcaa aggctctgct aattaggtag ctgatggggc atagagagca caaggacgaa
      721 ttctttaaac aaaggactag aaactttaag agctttaatt acttgggcac agagttcatt
      781 tcagaacttg ggagcaaatt attctaataa caataagacc aa
//
LOCUS       KCKM01002125             939 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33415apa ultra-conserved element locus
            uce-1362, sequence.
ACCESSION   KCKM01002125
VERSION     KCKM01002125.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 939)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 939)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33415apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>939
                     /note="ultra-conserved element locus uce-1362"
BASE COUNT          258 a          189 c          219 g          273 t
ORIGIN      
        1 catgctgcaa cgcgtcccaa gtccccaggc tgaagcgttt gacgggagac gacacgcagt
       61 attttgtgtt cgcaaaactc tgctgggaac gagataccat agacagagaa atgcactccc
      121 agggaccacc aattgggcag agctaccttt agtaccgcct cacttgtcgt ggtggaaatc
      181 caacccctgc caactggggg aggcttgctt tggtgctgtt ctgcccgcac taattataaa
      241 agagcacaga cgcagccttt ttccaagcat ggggaggtgg gggtgggaga gaagcatgcg
      301 tctatgcaaa gagcacaact attttttatg ctttcaaatt cttaatcctg tttggagctg
      361 tcagtggggg ttaatggaag ccttggatag gagaattcca atctggttgg cagatggata
      421 ggttggttat agctgcataa ctatgtcttg cctgcaggca caattcagaa cactgttaaa
      481 gcaatataaa gtctctgtca agctgaacca tttggatcag tagcaaggag aaataataat
      541 aaaaaaaagg gagttcattt ctgggccttg cgcatttatg ctagtatgca aaaactgatt
      601 aattgtcatc gtgtgctggt ctgctatacc tcggatttct acttctggag tagattttgc
      661 atgctaatat aatcattctc cctcttgaga cattagcaaa taatcaaatg aaaaacagga
      721 tcataattta ctgagattcg ggcaattctc tatgcaaatt tgacttgtta ttgctgctgc
      781 ctcgttaatc tgaatgcctt tgacaaactc ctttgattta tgaactcatg acaactccaa
      841 tgtgtatata ttttgctaga ttgacattat cattaagagt gggtggactg agctcacatg
      901 aatggctgat tttattcgct ggtgtctgct gctcaacag
//
LOCUS       KCKM01002126            1038 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33431apa ultra-conserved element locus
            uce-2468, sequence.
ACCESSION   KCKM01002126
VERSION     KCKM01002126.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1038)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1038)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1038
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33431apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1038
                     /note="ultra-conserved element locus uce-2468"
BASE COUNT          256 a          194 c          215 g          373 t
ORIGIN      
        1 cttcaataca agagcacgtt tagtatgggg aaggacttag aataagtaca ttggttttgc
       61 ctggcagcag ttttaagtgc ggatgtcctt tagcataaaa cgtatgtttt caggaaaggt
      121 attgtgactc tggaatttct tttgctgcaa atacaggcta gaattccgtt ataagacaag
      181 tgaaaggcat tgtttcagct gctggttcac cacctgacac ttgaatgaga gatgttgaag
      241 tgggaagaga aatgtgtatt ttctgagcct tgccttatat gggtgggagg gtgataattt
      301 cctattggat tgtgcactcc agcctcacag gattacctgt aagaactgca tcacttccca
      361 ttgtggtcat cctcattcca gcagcacctg tgcattcaac acatggtttc tggttatgat
      421 gttatgaggg tggaatggtt gcatctattc acctttcatt tgtgtgttga tgtggcattt
      481 atattaagta ggagtaattt ttttttctga tttttttttt cttgtgtcac cagtgcacct
      541 attccattct tccatcgctg tgctcctgtg aacatttcct gctatgccaa gtttgcagag
      601 gccctgatca cctttgtcag tgacagtagt gtcttacaca ggctgattag tggagttatg
      661 accagcaaag agattataat gggactttgc ttgttatcac taggtaattg tttttctcat
      721 tactagctat ttcttagtac tgcattagga gattgttaac accctctaac cacaatatga
      781 gctaaaagca tgtgtgatag caatgagccc ttagaaaatg attcagaatg cttttttaaa
      841 attttgtttg atggctgggt aatttattca atacatatgc tttcctgttt ttcctcctct
      901 tccactgatt gtgaggtagc agatatgtgg ctgttgatta gccaacgtta gttttggtat
      961 acttaacaca gcaatcgcat tctcctaact tttgttataa tattcccctt tcccatttct
     1021 tacattcatc ttctgcca
//
LOCUS       KCKM01002127             778 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33447apa ultra-conserved element locus
            uce-641, sequence.
ACCESSION   KCKM01002127
VERSION     KCKM01002127.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 778)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 778)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..778
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33447apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>778
                     /note="ultra-conserved element locus uce-641"
BASE COUNT          219 a          172 c          187 g          200 t
ORIGIN      
        1 ctccttgggc agctcgggtg ggcagcactg ctcgccaatg tgggacggaa aaacggctca
       61 aaaagccatg gtgtttagag gcttaattag cgtattgggt cattatgaca ctcggctcgt
      121 ttcattaccc tcctaatgcg ttattagtgg gcggttaaat actgtctgct ggggccggcc
      181 agttttcccc tggtcttgcc aggcgcggtg ccggacagct cacctgtagc gaggaagaaa
      241 tggagcccca attagaaagc tttcagccca gcacccatgg aaaagccaaa agctgataaa
      301 ggtcagcgtg aaatttgaat gacagggcta aagtctttta ctcataattt tgtgtttgca
      361 atagaattca gagcaattca cagccttaaa ggccttaagt gagaacagca attaattgta
      421 atgaataatc tgacaaatct ggttgacata tggctgctaa tgccctcctt tctagtggga
      481 gcagtggagg gattagatta actcaaatga aatctgggac cgccatgcca tctgcatgtt
      541 cagcgaggag cggtacacgt taaatggtga gtgggtagat atctgtcttg ttctcatccc
      601 tccctgagcc ctcagcagat atgggaatag cgcttttatt attgcgccag ctgcctgtca
      661 atccaataac accggaaagc cacgcagtac aacctagaaa gctaatatag caaaaagctg
      721 ttaaaaatta accagacaaa attaacataa attgatgtgt tcctccattc cacggtgt
//
LOCUS       KCKM01002128             285 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33462apa ultra-conserved element locus
            uce-7930, sequence.
ACCESSION   KCKM01002128
VERSION     KCKM01002128.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 285)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 285)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33462apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>285
                     /note="ultra-conserved element locus uce-7930"
BASE COUNT           88 a           44 c           66 g           87 t
ORIGIN      
        1 ggtaaacatc tgaagaacat aaatagctgc tcttctttcc aatgagtgac cttgtcaaag
       61 tgggtagaat ggagggatgg gggaggtgtg ccatcatgaa aaggaaaagc aataaaggat
      121 tccttatgac agcaatttgc acatttactg ctctttgata tgttaactag attttgcaaa
      181 atggaattct ttgtctttta gaggtccttg ggcagtgata gctcacagtc agaacaatgt
      241 tttgcaatag gcctaatgca tcttctaatt aataaggtaa cttgg
//
LOCUS       KCKM01002129             850 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33476apa ultra-conserved element locus
            uce-2138, sequence.
ACCESSION   KCKM01002129
VERSION     KCKM01002129.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 850)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 850)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..850
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33476apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>850
                     /note="ultra-conserved element locus uce-2138"
BASE COUNT          253 a          123 c          161 g          313 t
ORIGIN      
        1 tttaaaccta aatgtttatt cggtagcttt gatttagcgt tttcatcatt tacttgtttg
       61 caagaattat ctgttctgta tccacctgga gcttatgctt tattatattt tgcgatctaa
      121 attttggcta aaagaaaagc cctcaaggtt gacaaggact aggattgaca gaactatggt
      181 tctttgaaat ccctgttgtc catttaaatt ttaatgtttc tatcatttgt tcctcagtgt
      241 aaattaacag ccatggcagt gtgttgggtt tcttttctga agtcaagact ttaaatttaa
      301 ttcaatagcc tagatttaca gctattctat atttcacaag gcagaatcaa taatgtgact
      361 gaagtgaaga agataaaaat ttatggtatc ttgcaattta atggttgaaa agatgcaatt
      421 ggagagatca taaattgtga aggagtttat gcttcattgc tcctgattca gtgcttgctg
      481 ttagaacttg atttgtgact attcacaagg tgtgattaat ggtgtgatcg atgcttgctt
      541 cagtgcagta aagcagttgt aatgctcttc attagaataa ataaaataaa ttgactgaag
      601 ctttataaaa actgtgtaac atttaaaatc taaaatgtca attttttttc ctgttacaat
      661 ttaggtttct tcaggcagtt tccacctaca tcacatcact cattgtcatt ctttttagat
      721 attatagaaa tccatgtggg tttgggttag ctttatgcaa agctcagtga aggggaaaaa
      781 aaaagttgaa tagggctgac tagagtcaga gattttctgg tagctgtgtt ttgctatcct
      841 gcaaatgtac
//
LOCUS       KCKM01002130             687 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33490apa ultra-conserved element locus
            uce-5512, sequence.
ACCESSION   KCKM01002130
VERSION     KCKM01002130.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 687)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 687)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..687
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33490apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>687
                     /note="ultra-conserved element locus uce-5512"
BASE COUNT          187 a          145 c          150 g          205 t
ORIGIN      
        1 ttttcaaacc agaatgtggc atttgtcttg gtgtgcatat ttaattttgg tcactagtag
       61 gtgtagttaa attagaagca tttccaagac ttgtattttt taaggaccat tagtcctttt
      121 agagctcttg ctatgtgaat aatgaatgtg tcagtcacac tgcaaaggat aagccagact
      181 gcaaatacaa acttttcaag ccttgctgtt tctctctaaa agaaatttaa tctgtgcttt
      241 gccagtccgg tgcttattcg tggttgttga gtgatgcact gcgctcgttt caagagttta
      301 gcaacacttg caacctaaaa atcaattata tgaaaaacaa taaaaaatat tcttattgca
      361 tgccattaaa aaaaaaaaaa gatacaaaag gttaagcaga gcagccggca tctgcacact
      421 aatgacatga ttgttatgat aggtgtttgc tttaccctgg agtggtaaca ttgtaattca
      481 tccaccgctg aatgagtggg gacaattaat gcagtcaatg tgtcccacgt gttccctgca
      541 gcattaacaa ggcagctcca ggtccctcgg cagacacggg gctgaaaatt gagccggctc
      601 ccccgttgaa tgtgatcctg attacctccg cgggggccac ctgctgcttc gtgcctgctg
      661 gttttgtgcg ctggccgcct ccgtccg
//
LOCUS       KCKM01002131             677 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33506apa ultra-conserved element locus
            uce-918, sequence.
ACCESSION   KCKM01002131
VERSION     KCKM01002131.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 677)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 677)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..677
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33506apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>677
                     /note="ultra-conserved element locus uce-918"
BASE COUNT          198 a          160 c          119 g          200 t
ORIGIN      
        1 catacagagc tgccagctgt acagcaaatg tgcagctctc aaaccgaggc ctactaggcc
       61 acaggctcca tcctgagatc tgtaaggcac cttgctgtca ttggcaagcg ttccctgcta
      121 tcgctgctac catcgctcca cactacacac aacttaaaat catctgatta ttagaatttg
      181 tggtccacac tccattttat cctttattta atctatcccc agatcacaca tttgtttaaa
      241 tgttttggct ggtttacaaa tcatgcagcc atctgcacag taggtgtgac accatttttt
      301 agacaaaagt tacattacaa aacaacaaag ataaagtcat ttgaaatgct ttggtgtttg
      361 ttattctgcc ctgttcgctt ggaccaactc taagaaataa atagaattat ctgtgtaaat
      421 cgatgaacat ctatgaaaaa caacacccag cagaacgcag agcttgctcc attacctacg
      481 ttaatatcat gacagctgag gagagatgac ctggcccact tctcatctct cctgtacaga
      541 tggctattaa agagaaagta tcccttttgt atggtccatg cagaaaccct ttatgggctt
      601 ttcaaataag ccagcattgc ccacaggaga gtagcttcct gttagtatta aatagcccag
      661 attttgtcta ttttgta
//
LOCUS       KCKM01002132            1159 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33520apa ultra-conserved element locus
            uce-6059, sequence.
ACCESSION   KCKM01002132
VERSION     KCKM01002132.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1159)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1159)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1159
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33520apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1159
                     /note="ultra-conserved element locus uce-6059"
BASE COUNT          335 a          193 c          221 g          410 t
ORIGIN      
        1 caattccagt ataatgcatc cagcttggta gagttcaaac ccagtaatca tgtactgttg
       61 tcctgtgcaa tgtattgtga gttacttgag ttattccatt tctttcatac aactcatttt
      121 agttaaaatg gtacctgtat gttaatggct ctccagttgt agctgtttct taatgctgtc
      181 atctttatct caagttctta gctgttcaga agtgaaaaga gacaaacttt gagtcctcaa
      241 ttagtaattc attcgctttc actattaaca tgtattgtac ttacattgtt tttaacataa
      301 ctgagttaat ctaaatatgt aactactgaa gcttgaaaat tatgtgcaga tgctgtaact
      361 tataaggtga tttacgaata tatatttgtg ttttttctgt tcgctgttaa ttcgcagtta
      421 aattctaaat cttcgtggtc agttttaaat ggatgatgcg tttttaatgt ttcttctctc
      481 cctccaaaga acagcaatag tagtagattt aacaatacca tagactcatg actatgaaat
      541 cgtggctatt tgtgttaaca tgttgttcct gttgttgatg tgatacaaag ctcctgcaaa
      601 acagctggca cagtccagtg cactggcttc cctcactgga ctcggtaagt atgttcctta
      661 tttttgagag ggcttaaagg gggagtttca ctcttgcctt gcgtttctag aaattgcatt
      721 ttgaaagtag attttaattg cccaggagta tgggtcactt tccgataact ttatcattat
      781 cagcaccttt gtttgttcca caggtgatcc taaagtggga tggtttttgg agtaaaggac
      841 tagtcagtgt gagttagtgt atgagaatcc tgccctgatt ttgaaaatac gtacaaactt
      901 tagataaatt tactcatcaa agtgtgattg tttcggaagc atgctgcagt cttcagagaa
      961 aggaatactg ttgtatattt ttctcctgtt ttgatccatc caaacaagaa gggaaagttg
     1021 atagaagagt gatgcgaaag tctataaata aaaatgttac tgtctttgaa ttatcatttt
     1081 attgaaaagc tacataagca cagaggctcc catatcgtat cttaccagaa acaacacagg
     1141 agaaagagtt gaaattcta
//
LOCUS       KCKM01002133             312 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33534apa ultra-conserved element locus
            uce-2308, sequence.
ACCESSION   KCKM01002133
VERSION     KCKM01002133.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 312)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 312)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33534apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>312
                     /note="ultra-conserved element locus uce-2308"
BASE COUNT          109 a           51 c           63 g           89 t
ORIGIN      
        1 ttattttttg actgaatgat agacatcaaa gttggaaaaa aaagataaaa gtgtaaatga
       61 tgagtcagtt tggcacagtg caaagttgtt aatatttgac aggtctcagt gtcaaagatt
      121 tcatggactg tcaaaatatg ggcaaacaag tccttggggc agagaaggag aaatatttac
      181 attccctaga cacccagtag agtttcattt cttttgacac cttccttctg tactggattc
      241 agacataaaa gaagtctgac aggaatataa gatgcctcaa aggcaaacct tacctatctt
      301 tcaggagaca at
//
LOCUS       KCKM01002134             284 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33549apa ultra-conserved element locus
            uce-305, sequence.
ACCESSION   KCKM01002134
VERSION     KCKM01002134.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 284)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 284)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33549apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>284
                     /note="ultra-conserved element locus uce-305"
BASE COUNT           97 a           48 c           50 g           89 t
ORIGIN      
        1 tatatataaa ctctctctat aaatgcagtt gtttgaaata agcaggattt tcagcaatgt
       61 tgtagcattt gtgtatctac acagtcacta tctcttccat atacacaaac atccgcctac
      121 ccagaaaata attgtggata attcaatgtt cagattcgat aatggatgct caaataaata
      181 tgagaattcc aagcaaattt gtgcaaatga aaaaagattt cctctgacat aatggcatgg
      241 tgcaaggctg tctgtaatga gctgtaattt gtctggaaga gcat
//
LOCUS       KCKM01002135            1060 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33564apa ultra-conserved element locus
            uce-7652, sequence.
ACCESSION   KCKM01002135
VERSION     KCKM01002135.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1060)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1060)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1060
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33564apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1060
                     /note="ultra-conserved element locus uce-7652"
BASE COUNT          322 a          185 c          193 g          360 t
ORIGIN      
        1 aacaacttaa taacttttgt gaaccaacca ggaagcagac ttttaccaca tgcattcgca
       61 ataacgtaat cagaaaacgt gtcaggaaag ggacttagag cagtttgcag actcctctcc
      121 aggcagaaga gcaaaaggtt ctctctgtat tttattgacg gtttgctgat atcttaattt
      181 tgagtgcaga gctttttttt atgattcagc tcagcactac tacagccaag agcgttaaat
      241 atagctgcat ttgtgaataa aatatctgtc ccttgtctaa ggcaacgtgt gattctttta
      301 tttcactttt tcagacttta tttctaaaat cctcaaaaat ctatgttttg ggaggcagct
      361 ggaagtgcac tgtttgcaca ctaatgtata ctagcagcca ttcattttct ctgggaattt
      421 ttatgtaagc tcccttattg ggaatatgct aatgacatcc gccatgatta ctgattttct
      481 ttgaatcgtt attcctctgt gggcaaagca atcagaacgg gagaacagga gatttacttc
      541 ttgcttgtgt gccttcttca accatctgct ctatcctgat tcatttgaat aagatctgct
      601 gttttaaatt ctttactctg gcattctgaa gcattttaaa gcttaaaagg agttaatagt
      661 tatctatcag tgtcacaaac atggtactgc gatgcattct aagagcaagt ttgccttcca
      721 atggtttaca gggccagatt aattttatta aagtaaaaaa ttacaatgtt ctttaacagc
      781 ttcattattt cagacaagtc ttttgtgagc atatttatta tctggagcat ggagtataaa
      841 agctgaaaga aagggagcta atttatgaag caagaacatt ttaaaaatgg aaattgttaa
      901 tctactccct ccctcaaaag aagagggcaa aattgtgatc aatttaatga aaatacaacc
      961 ttgtaaaatg cactgcagtt actgaattct tgtacctgtt cttttacctg ggtgaatttt
     1021 tgaagtatat ttatgcaagg tcattctgat tttaagaaag
//
LOCUS       KCKM01002136            1038 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33580apa ultra-conserved element locus
            uce-1929, sequence.
ACCESSION   KCKM01002136
VERSION     KCKM01002136.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1038)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1038)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1038
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33580apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1038
                     /note="ultra-conserved element locus uce-1929"
BASE COUNT          340 a          196 c          195 g          307 t
ORIGIN      
        1 cagtctcagg acagtctgca gcagtcggta gcagtctctc tgactgtcct cttcccttcg
       61 gccagcacac ccatgcagac atctacgctg agatatccgc accctgatgt agtggccatc
      121 ggggcaaaaa agggggccat ggggaagctt ttataggtat agttatatac cttatctcca
      181 aatggaagat ttcaatctgc aaagatctat caatctggca tattacatgc agtgagatac
      241 acacatcaga ttctgtttgg tttgttaaaa aagaaagaaa gaaaataaat gcctgaaaaa
      301 tattcttctc ttgctataaa cacatcagta ctcattttct ctatattcta cttcgggcca
      361 ttttgtgtaa aatctttaat taaagttttt ctttgaaatt gtcatcatca aagcagaaga
      421 aagaaagtaa aaaacggaag gacacagctg tgcatatatg aagtgctatt cagtaccaaa
      481 tgaattggaa caaaataagt atcgtgactg ttatgctctt agttttggct ctgtattctc
      541 agtagcacag tctaacttgt cactttatat tgattccatc tgtttacact ctgcagagta
      601 ttggcttcct acagtgaaca tttcctattt accagctggt aaagataggc tcaaaccaga
      661 tagaaaagaa ttagactatt ttcagatact cataaacata aaatcaaaaa ttaatggggg
      721 aggggagata aaagtggggg gagtgaggaa aatatatggg cctgatgctt gttcatattg
      781 atagctcttt actacccatt agcaatttat agagaccttg gaatttgtgt gaagagtaca
      841 caaaataaat catttttcag tcctctttac attctgcttt acatgaatag ccttcttgta
      901 aataagaatc aatccagtaa tcagtaatct ttaaagggaa atagttggag cctgaacttg
      961 gctaatataa tattaccacc cccaccagcc agccataagt gaaaaacctc cgtataaaat
     1021 ggatgcgcac atgcagta
//
LOCUS       KCKM01002137             575 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33595apa ultra-conserved element locus
            uce-6167, sequence.
ACCESSION   KCKM01002137
VERSION     KCKM01002137.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 575)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 575)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33595apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>575
                     /note="ultra-conserved element locus uce-6167"
BASE COUNT          171 a          101 c          118 g          185 t
ORIGIN      
        1 atgctccagt taaaatcagt ttaacactag cacaactctg taaaatttag tggacctggt
       61 cttgattttc actagtttga ataagaaaaa cataattgtc tcttattact atggagaaat
      121 agatttcatt tctttcttaa atctttgttt gtttaaacac tgtactgtcg cattgaacat
      181 tggattaggt gcagcaagag tttacagaga aattgcatag ctgtatttgt acagagctgt
      241 acctgactcc cacctcctgt agtgtgagca gtggtaagtg aactgtttct gtgttgttca
      301 ctcactctgt cagatcgaaa ctcagctcaa tagcattaaa ctagctccca tttgaaagat
      361 ttgtcttaca aaaccctgaa aactgcgctg aacatgcata cattgatttt gttgctggaa
      421 tctcctgagc tttgatgaaa aggagactcc acatgcaggt gaaagagggt ttacctcttc
      481 aatattaaaa agagaagatt aaggattttt gttcagctaa ggctgaacta atcagtggcg
      541 tgtgagggta agagagttgg actcatgcct gtagt
//
LOCUS       KCKM01002138             973 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33611apa ultra-conserved element locus
            uce-1177, sequence.
ACCESSION   KCKM01002138
VERSION     KCKM01002138.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 973)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 973)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..973
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33611apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>973
                     /note="ultra-conserved element locus uce-1177"
BASE COUNT          283 a          222 c          191 g          277 t
ORIGIN      
        1 aaagatgaaa atatactggt tttattaatt tgctgaaact aagcccactg gatttacttc
       61 aagtcacctg tatcatgcaa ttaccattaa actacagaca ttataccact atcaaaacta
      121 tttttttcag acctctgtga gttggtgtag tctctctgcg taacgaaaca ccactttgtt
      181 gaagtaacca tatttcattc atgctgatat aagtgcaatt gcctgtacat tgccacatgc
      241 tcaacccagc aaatgcccgt tctacacaat gaggaaactg tctgtcattg ggcagttatt
      301 tccctctcgg cagcttcagg cccccaagca ggtgctggga agctcatccc tgctccccct
      361 ctcagcacaa caccctgccc aggtggctcc tcctattcct tgcaaggaga gctgcctatc
      421 tgatttttgg agctctggca aaaagcctga gctcattgat tacagatcac tgttaataaa
      481 gagcatttgt aatgcagcag tggtgataca atctccacac gccagttcat gatggccctt
      541 cagtctccac aattaagtcg tccagcaggc atggcccctg ttgcagctgc tctgtcaatc
      601 tcattttgta gtacaaatga tcttagaccc agtgtttgac atggggtttt aacaccaaag
      661 aaggcaattc tgcaacttca aatgagccta attggttgtg cgctcaggcg ttcactcaag
      721 ctgcttcagt ccatcagaga gagatttcca actaattgaa cagctcagaa gaaaaagaac
      781 caccgaaatc acaatgcagt gggccctttg agagggtttt catgataaaa acgttcaaaa
      841 caagattttt tgttgttgtt aaatcagcca cctgtcaaac tagatagagg tttcattggt
      901 aaagaagctt ttaatgaggt atggcataga aatgaatggc tattaatagt gaagtataca
      961 ggtaaatgca att
//
LOCUS       KCKM01002139             874 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33627apa ultra-conserved element locus
            uce-7288, sequence.
ACCESSION   KCKM01002139
VERSION     KCKM01002139.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 874)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 874)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..874
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33627apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>874
                     /note="ultra-conserved element locus uce-7288"
BASE COUNT          272 a          149 c          172 g          281 t
ORIGIN      
        1 tttgtaaaat ctggcatgct ttgttcagag agtctccctg ctttgacaaa ctcttgtgac
       61 aagtgcagga ggagcgcagt gtcttgaggt ctgatccatt cactactaac ttctccaaga
      121 gcatagataa ttacaacatc tagctgaaaa aggttagttt aaaagcaatt tttaaagata
      181 tttcagtgga gggaaggaga gcagggatga agagaccaat taaccaattt ttcttggcct
      241 ttccctcacg cgcagacacg ttctgcacaa acccctgttt tgatgtatta ttttaattaa
      301 tcccggtctt ttgatttctg caaaaagaag gttagcaaat gtaacaatgc tcgagagttt
      361 ctttatcgta aaagacacat aatttcaagc atttaataag gtagatttat tctgggtagt
      421 ttagtttgca cattcactca aacagccctc cccaaagaca acattaaaaa tgtgattagt
      481 tagctgccat caataacaca aaataggaaa acactctctg aagggacagc tttgtggagg
      541 gcactgcaca gtgtgtagta aaaatatatg gcctaataag tttacatttg caggctcatt
      601 tgttaaaact cttgaatttc taatttgtgt ctgaaagata aatggatggg gcctcagtaa
      661 agtgtgagat taatactgat ggatggggat tcaggttttt gctagcctct tacttctgtg
      721 caacccagta ggcagtttat ggggaaaacc aaatgtaaat aaaagagagg acattattta
      781 ccttggtcaa ggccaattac cagttatatt gttcttttca actttattgt ttgaatgtaa
      841 attatcctta tctaattatt gtttaatgca tttt
//
LOCUS       KCKM01002140             480 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33643apa ultra-conserved element locus
            uce-2160, sequence.
ACCESSION   KCKM01002140
VERSION     KCKM01002140.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 480)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 480)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33643apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>480
                     /note="ultra-conserved element locus uce-2160"
BASE COUNT          136 a          106 c           88 g          150 t
ORIGIN      
        1 agctttgctt actgtggtaa atcaaacaaa ccacatcatt cccgaactcc acaagcattt
       61 acacgtttga ggtttcactt ctttggaagg ctggctacca gcgtatatct ctgcaattta
      121 agttggttag aaagctatct acggaagatt tgtatttata ctacacctat ttcttgttgc
      181 actcttctgg ggatgccaga gatggttttc ctcctcctca actttcgtct ccgctgtagt
      241 acagattgtg aatgaacaag agagcagcgt atactagcct ctctgtcaaa accaactcct
      301 gcaacccata aataggtctc attagccttt agaaatagta aacaaatttt catggctgga
      361 acacagtgga ggtatgtgag cttggattaa gcctgtgaat aaacataagg gagtccttat
      421 gtagctctta tgtaaattat atcacagtat atcacagttt tacatctact tccagctccc
//
LOCUS       KCKM01002141             342 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33659apa ultra-conserved element locus
            uce-2033, sequence.
ACCESSION   KCKM01002141
VERSION     KCKM01002141.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 342)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 342)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33659apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>342
                     /note="ultra-conserved element locus uce-2033"
BASE COUNT          114 a           65 c           46 g          117 t
ORIGIN      
        1 acaaaaaagc ccacaatatt ataatctgta gcctataaag attttcagaa acattttttt
       61 attaatttga cactgatacg cctccatttc taatatccca accctgcaac attttaaatg
      121 caattaaaag tggttatgaa agagtgtgga cttccttgtg aagtaggaaa tcactcttgt
      181 gattaacatg caaacgagct catgctggca gaatagattg gggttttaaa accccaatta
      241 cttttgtatg attatctatt tacccgtaca cagactattt tcatttttca tctaatacaa
      301 agtcatcctg cttacatttt tagcacagca attaatattt ac
//
LOCUS       KCKM01002142            1050 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33674apa ultra-conserved element locus
            uce-6669, sequence.
ACCESSION   KCKM01002142
VERSION     KCKM01002142.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1050)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1050)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1050
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33674apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1050
                     /note="ultra-conserved element locus uce-6669"
BASE COUNT          287 a          229 c          204 g          330 t
ORIGIN      
        1 aggctggttc tctcttactt taagaccctc aatatcctga aaaaataaaa tgtattgcaa
       61 aaccttgaca ttctacagaa attaaatgct tttggacagc tgctgtccat ggtaaactac
      121 tttctccagc agtaccaaaa tgtttttagt gtgaattcag aaaattcaag gataacacag
      181 accactgagc agttttgttt aaaggttgtt tgcataattt ggaaatgagt ccttttatag
      241 agagaacaca attcactcta gaagcatggc aatttttcca aacaaggtgt aggctattaa
      301 acggttaaga ctaagtaggt gggcagctaa agtatctgcc acttctaaga gcaaaaatag
      361 catgtaccct attaaaagca gcctgatagg gtcagtagcc cagtctcaga ataccaccca
      421 agaacaattt caattttaat agcttttact atgtatttca taagcatgcc cattgaaatt
      481 gagtcatcaa agcctcccag ttcctccaag acagatttta gcccgagagc ttggagtaat
      541 tatcccactg gatgttagcc tgtgtagcta tttcaacctc gttcatcatt tcaaacagct
      601 acatactctg cctgctaatt tcatcagatg gattagcctc tcttacttgt ctatcttttt
      661 tttttatttc tggggggtga aatattgcct tctttccttg ttttaataag ctgagcaggc
      721 atgcaccacc gcaccgcttc tgcctcctat ttctttcagc tcagagaatg atcttctggg
      781 ggaagagctg ggagtaaatg tgaaggtgaa aacttggcca ctttcacctg caggctggaa
      841 ccagctgctt tccacccatg tctgaaaata cagtcttgag cctatctgaa tttatctgcc
      901 actctgttta cagtctattc tgagcaggtc tgttcttccg tgtatctttc ctttcttttg
      961 cactgtatgt cagtggcttt ccggggctgt gcatgaggcc gtatctctgc taatgcacat
     1021 catggaacag cctagttggc aacagggaag
//
LOCUS       KCKM01002143             945 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33690apa ultra-conserved element locus
            uce-2959, sequence.
ACCESSION   KCKM01002143
VERSION     KCKM01002143.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 945)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 945)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..945
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33690apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>945
                     /note="ultra-conserved element locus uce-2959"
BASE COUNT          214 a          228 c          266 g          237 t
ORIGIN      
        1 ctgtgctcat attgcctttt ctcttcagtt tggggttaga aaaaaaaaag cagtccagcc
       61 tggaattgtg ccctgtgcct ggccctggtg tccccctctg gcaggagccc cgtgccaccc
      121 cctggggctg aacccagcct ggggacaggg agcaggtggg accctcctct gggctcaccc
      181 gctcccgacc aaagcgcaca acgagctgtc ctttaagaaa gcagggggaa acctaacgcg
      241 ggcccagcga aaggcagaga attttaatag tttcaaaaaa aattaaatgg gggcaaaaac
      301 cttaaaatct ggagtcctga ttacctttct gtgattgttt cagacttgaa gcagcaggcc
      361 agcacggctg gtcaacgccc tttgatcgtg taaatatcct gctatttcct attttaatgt
      421 tcttcagatt tagtacttgt aaataaacac acgcatcaag gagagattaa acatttttgc
      481 taaagctggt gtcttgcctg tgtttctggg ggcaatgtag gtggtggctt tggggaaggg
      541 ctgttcccag gagcagcatc cgagtctgtg gctgtgccag ggtgacacga tgcaaaacca
      601 cgttgcgatg gactggcatc gctggggttg tgggtatggg gaccctgaac tgtggccgtt
      661 tataccccca aagcgaccct gggggctgtg ccagcccctg gggcgggttt tggtggtgga
      721 tgcacgcagg gtttgagggg gtttgtccat cagcactttc ctgggtgccc tatgttcaat
      781 taatttaaac cgtttgattt cacttgtcgc ctttcaaagt gctcaaagct gctggtgaga
      841 tgcagaggag cttatgttga aagcaagaag tagagacctg ctcagctgca tcaccacaca
      901 ccagggtccc aaggagctca ccagggctga gatggcttcg cttct
//
LOCUS       KCKM01002144             875 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33706apa ultra-conserved element locus
            uce-6446, sequence.
ACCESSION   KCKM01002144
VERSION     KCKM01002144.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 875)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 875)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..875
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33706apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>875
                     /note="ultra-conserved element locus uce-6446"
BASE COUNT          295 a          135 c          162 g          283 t
ORIGIN      
        1 ttctttaatg aatacttttc tcagtgatgt tgtttgttgt ttaagatacc tcccagcatc
       61 atttttaatg tcattacaat atgcaggctc tgcagcttgg cgaacttaaa ctaccaaaca
      121 gctcataaaa aaaactgtgg ctcttatggc actacagata gcagcttctg tattagattt
      181 gtgctacttt aatgctgcct tttctatatc tcaaggctgt ttcatgcaaa tatataagct
      241 taggtatcct cacaaacaag cagccataac atttcagtaa ctttgtttta aaagaaagac
      301 ttttgaacat gcaggaaata ttagtacatc aaacaaagtg aaagacaagg tagtttaact
      361 tgttggtttg tttgctgaaa ctctaaagta aatatactgt agctaaaagt gttccatttt
      421 tatctgcctg ctgcagtaat ggctgtgtta cttcagggct tacacttcaa taattgatca
      481 gggtttgtat agcaccggct aagagcaaaa ataagagtgt tgctttgaac aaactgctgc
      541 aatgttatag cattaggcac agaaacaaga ttctggaaat atagatatat aaaaaacagg
      601 aaaaagatgg ataagttgaa gtggtaaata ctgcttcagg ctagaaagta atgagaattt
      661 ttccatagag agttttgacc tgctattcaa aaattgtttc ttgtcttaat aaatcctaaa
      721 agtgtaattt acttgcaaaa gggaaagaac aaaggcacca aaattctttt gataacaaca
      781 cttgttaagg ttgataagtt gggtttcaaa tgtgtgaaga aaaatgtgtg acagtttgtt
      841 ttaaggtgac aacctaagtg ttcagatact tccat
//
LOCUS       KCKM01002145             811 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33721apa ultra-conserved element locus
            uce-3481, sequence.
ACCESSION   KCKM01002145
VERSION     KCKM01002145.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 811)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 811)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..811
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33721apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>811
                     /note="ultra-conserved element locus uce-3481"
BASE COUNT          266 a          159 c          150 g          236 t
ORIGIN      
        1 taaaccaaat acctgcacgt tataataatt gtcctaacca ttttttggta cgaattccta
       61 tgagaaatgg attctgtgac actgtattaa cactgaaatt gaatattgtg aacttaaatc
      121 tatgcatgta caactgagta atattgcatg aaaggaattt tattgaatgc aagtacacaa
      181 ttgtgcttgc taaatggatg ctggactttt taataaagta ctaaagcggc tgtttggtac
      241 taccttgtcc taaaatttct accaattgta ctctatgctg tttgcaaaac caatctgatg
      301 agataagcag ctaagcatca caaagacaat ctttcttgga tttgtcctca attgcttaaa
      361 aaataaatta tgtcctaagg gacaagtgac aagggcccag gaggctgagg aaaactacct
      421 cataaaacgg gagctggcca ccatcaaaca gcagagtgat gaggccaata ctaagctgga
      481 gcaagctgag aataccatca gggagctcca acagcagcag caatgggtaa gcactctggc
      541 agcacatcat ctcatctttt tcactcgtgt tttatttttc ctcatcatga catggtctct
      601 gtgctgtccg tgtgaatgct tgttcattgt gatttgcatt cttaaaatta cacagattgg
      661 acagagtgat attttgggct gttcttactg atagatgaga tttataacct tggatagatg
      721 taagctgtta gttaaacatc cccaaaacaa aatatgctga gacaaaaact cacaacccca
      781 aaccacacca ctaccaatga aatacttaca a
//
LOCUS       KCKM01002146             912 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33737apa ultra-conserved element locus
            uce-7138, sequence.
ACCESSION   KCKM01002146
VERSION     KCKM01002146.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 912)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 912)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..912
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33737apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>912
                     /note="ultra-conserved element locus uce-7138"
BASE COUNT          267 a          208 c          174 g          263 t
ORIGIN      
        1 ggctgtttat taagatcttt taaggggttt agaatgaaga cacactgccg gtgtacaggg
       61 agcacagaag gggtaattta aaacccatgt ttttcctccc cctcaccgaa aacatgccca
      121 gcattgtgca gctgtgctgt cagcttcatc actccctcca tctccactct tgctaattaa
      181 aaggttgatc acagaacaat gctcttctca ttaatttcgg ctttctgatt gggcaggatt
      241 cccgctcgct ccgcctgatc ttttccacac tgctgaagtt aatgtgacag gagcccgaag
      301 atggattacc cgctgccata ttgcccatca cctccaatca gcagctatct gggtaaactg
      361 attgttctaa tttgctctca ttatttttac aatatcagga gaaaataacg cacacagctc
      421 actgtcaaag ccatgaaaat cagccattag ttaaacccag acactgagtg gctttattag
      481 aagcactgca gtttattgat gcggcttcag taaactaaga taatacctgc cctcttcaaa
      541 cacacttttt ttggtgtatt tacgttgaaa gaaaatattt attaggatac ttttggaaac
      601 actcgccgtc tcagcctgtt atcttgatat gctggcagac aacaaagatt aagaacaatg
      661 gaggcttgac ttccacataa agaagggcaa aatatgcagc agtatctgca cagcagcctg
      721 cctgcgcgtc ttggctatta ttctacagct taaataaaaa tcatctcagt actaatatga
      781 cagctgaaca tgtaaacaca ccccaatatt gcatgaaatc tggtactact gaaaaagcaa
      841 acatggtacg tgcataactg tgcaagctgc atgtgcaagg tcaacaattc tgttttgagg
      901 ttggattttt tt
//
LOCUS       KCKM01002147             614 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33752apa ultra-conserved element locus
            uce-5600, sequence.
ACCESSION   KCKM01002147
VERSION     KCKM01002147.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 614)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 614)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..614
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33752apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>614
                     /note="ultra-conserved element locus uce-5600"
BASE COUNT          183 a          110 c           99 g          222 t
ORIGIN      
        1 ggttgtttgt tattcactct tttcatgtac agcctgatgc atctttgtca tgattcatta
       61 tacctaacag ctatatcaag tgttgcaatt actgcacaat acagatttaa gcctataata
      121 tttctagatt ggagagagaa aaataatata ttaagtgctt gtgatatctt tatgtataag
      181 tttgagaatc attaaatagc tgtcactctt ccttcctcct cagcatcaat tactccactc
      241 tggttttact tactccactc tgtataatga gtccccagag catgtttcat tgcaggagaa
      301 tgaacacatt cttcacttgc ggtcagtggg atgtggttaa tttgaaatca cttaaactat
      361 tatatctgtc aagcgtggtt attttatttt cagttcacat cagtgtttta gtatgcatgt
      421 cggttactgg gttaaactgg cagattaatt tccaagcatt ctgttgtaat gctcttcatc
      481 actgtcttta catgtacact tctgctgaaa attaatatgt ttccattaaa atttgcttca
      541 aagaaatcta catgtaatat aaacagccat atgataaaca gcactcaata ttgaatgaaa
      601 actggcaagg tgaa
//
LOCUS       KCKM01002148             917 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33766apa ultra-conserved element locus
            uce-5218, sequence.
ACCESSION   KCKM01002148
VERSION     KCKM01002148.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 917)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 917)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..917
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33766apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>917
                     /note="ultra-conserved element locus uce-5218"
BASE COUNT          302 a          181 c          167 g          267 t
ORIGIN      
        1 ttaaagacat acaggacttt tactttcaca aatgaattta tatgttccca atgtgattta
       61 tttcttctgt aaagccataa ttataacaag aagtgcgctg gaaagcaaga cacttagcag
      121 ccactaaatt agtaaccatg ttgtggtttg tagaacaaaa tattttgttt attcaaatta
      181 acctaaaagt atacaatttc acaaaataaa agccagcagc attggtatga tcagaaggag
      241 agaaggagac tcttatgcac taaagaatca gcagtgttac ttactctgag gcttgataat
      301 tttaaaaaat gtgacagcta aaacccactg gcacatgctg caaagaagga tgtgataaaa
      361 taatgctact catcttcaag gctgtcagtt cagcaatcag tacttctatt catctccgtg
      421 gcctgctaac tcagtgctac catgcgatag ataaacccta atccaagtga cagcgttcaa
      481 atcagaactg atttgattgt tcacatatga taccataaga caccagaagc ctaaagagtt
      541 tataaaaatg cctagatgtt tcttgtaggc acactttctc ctagaatctc ttgcagtgta
      601 ggatacatta gctcttaaac ctggggtaat ttgtaggtca tgaaaatgct ttggtgccac
      661 agtcagttct tatcataaac taactctagc aggagcaggg aacactcaca aatacactgc
      721 agttcagacc ttgtaaaacc cacctgttct gttttcaagt ctcccttgca ggaagagaaa
      781 tccttttctt tcttcgcaga gacaagacct gctcttgaag agatagaaca cgaacacatt
      841 tgtttccatg cataaagcat agtatatggg aaagtggttt tatggcacat gcgtcgctat
      901 ctcgaaagtc attcttg
//
LOCUS       KCKM01002149             890 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33782apa ultra-conserved element locus
            uce-5690, sequence.
ACCESSION   KCKM01002149
VERSION     KCKM01002149.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 890)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 890)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..890
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33782apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>890
                     /note="ultra-conserved element locus uce-5690"
BASE COUNT          254 a          169 c          201 g          266 t
ORIGIN      
        1 cattttgccc ttaggactga atttcccaac tgactattct tttagactgt cttttgatta
       61 acaatctgtt tgcagcaggc tagggccaga gaggcagcat ataccccact gttcaaatct
      121 gtgacaaaat attcagcgga gaactactta ataaaaatca acttgctcca atagtcattg
      181 agaaatacct caactgttag caatcaattg agggctgagt tgggggaaaa aaatacaaaa
      241 ggacatcaaa gaggttctca ttcccagtct attgctccat ttaagggtcc tataatttgg
      301 tgaggttgtg tgctaaataa tttgtaagcc ttcagaacat ccaggttatt gtttgtggac
      361 agatggtgca tcacatttta ttgcttattc cttctgtggt ttctcatatg caggactgat
      421 gtgcactctg aagtctttgt ttccttgcta aaatctctaa tctaaaacag gcaatcaagc
      481 acacagacag tgcttcagaa agcataatca tagttttaaa ggggggaaaa aacatttcag
      541 ctgcagttaa gaagcagatg tgttccctga aaatgcaaaa ggttatcaga agtattaaaa
      601 taggaaaata gatacggaat ttggaggcgc tggggagagc gtgtatttta tttcagtact
      661 gcagggtagg tatgcctttt cctaggctac ctgctttgta tctggctctc tgtggagccg
      721 gcgtagagaa agcctttgga gaccggcttt tgcttccacc tttcccctga gactggcagt
      781 ctttgtcttt tacaggcaag gagcagccgt gttgtgatcc tggaactgct gctgccctga
      841 agagttaaat catgttgata tacaggaagg aaatggagta gactaactct
//
LOCUS       KCKM01002150             359 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33797apa ultra-conserved element locus
            uce-6843, sequence.
ACCESSION   KCKM01002150
VERSION     KCKM01002150.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 359)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 359)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33797apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>359
                     /note="ultra-conserved element locus uce-6843"
BASE COUNT          103 a           63 c           64 g          129 t
ORIGIN      
        1 cttcaaatca ttaatttcca gagcgatgca aatattttct aaaaataggt cactcacagc
       61 ttttaactgc tgagctctgc tctggtttaa ctactggtag cattgtaccc tagaagcgag
      121 aaaggctcta gagagattac tttcactttt ccctagatat atttagtgta ctaactagca
      181 tagttaggat attatttttc tttggttttg tcagtagcat gtttgaaata aattttatta
      241 agtggtagtg tatgtaacat tgcattgtgg gtagcagttt cctgccttaa cctagccaca
      301 tcctcagctg ttatatgaga caagtttccc atattttctg caagttgact tgaaaaaaa
//
LOCUS       KCKM01002151             692 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33812apa ultra-conserved element locus
            uce-587, sequence.
ACCESSION   KCKM01002151
VERSION     KCKM01002151.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 692)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 692)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33812apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>692
                     /note="ultra-conserved element locus uce-587"
BASE COUNT          211 a          144 c          118 g          219 t
ORIGIN      
        1 gaagcacttg gatactgaca gcttgtttct agtcagcatc ccacagcaaa gaattattac
       61 gtcttatgat tattttttat ttacatacac atcaaactga caaaatgagg tttatgcttt
      121 ctccactttt tagtttccag ctgactatca ttttctttta agattaaata agtaatttat
      181 tgaactgtaa catcaagtat ttattaggaa attgctgggt aattttaact gtatcttttt
      241 ttaaaacata aatctgcatc caaggcctcc agtaactttg tgcgactctg caccattaat
      301 ttcttccaga gtgacattct gatatgagct gaacagatgg aattgcagga ttgttctagc
      361 aaatttatca taaaaaatgc atccgacacc tgtgtaattt gcctaatcat tttcctaata
      421 agctcccacc attaattatg cacgatttcc acaatgcaat caagataaaa gtaaatctga
      481 tgacttaata cccttcaaaa taattggttc acccaacaca aggcctcctt tgctttccat
      541 agccattcca gttaattaga aaaagggtgc accctgtagg agtcagcaga atggaggctg
      601 atctcatggt gggaggcagg cctgctgttt ttttgggcag gagtcaagga tattaactca
      661 tgaaagagag gaacggcccc ccccaccccc ct
//
LOCUS       KCKM01002152             577 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33828apa ultra-conserved element locus
            uce-6344, sequence.
ACCESSION   KCKM01002152
VERSION     KCKM01002152.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 577)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 577)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33828apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>577
                     /note="ultra-conserved element locus uce-6344"
BASE COUNT          218 a           95 c          103 g          161 t
ORIGIN      
        1 ggaagtaaac cattaagtga taaacaagga aacatggata caattacttt cagaacagaa
       61 ttttatccac tctagttctg aaaatgaaga gatagtactg actggaacac ctcaattctg
      121 aatgcaaact atacaatcta ttatattaaa caaagtcaaa agcaatgtga aagatcttga
      181 atctattcaa ggcatgcacc tcattacaga cttagcaaat taaaacacaa ataggattag
      241 aaaagaataa tgtaacaatc tcccactatg gtccctggag cattaagtca taaattgggt
      301 ttgcattaaa ttgtgcctgc agtattgaat tcagggaaag agctataggc tgaagataaa
      361 ccttgctagg ctagccaact ttggttcggc tgagtgtttt cataatcaca caactgaatt
      421 tgttggaatg taaaaagaca cattcaaaaa catgcatttc atatcttaat tagaaaatga
      481 agatatggta tagcaatttc tggctatacc aaagccaaaa gctgcaggca tttgaaattg
      541 tcgcttctcc tgaagatgtt taaatatgga agctaag
//
LOCUS       KCKM01002153             681 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33844apa ultra-conserved element locus
            uce-724, sequence.
ACCESSION   KCKM01002153
VERSION     KCKM01002153.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 681)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 681)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33844apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>681
                     /note="ultra-conserved element locus uce-724"
BASE COUNT          201 a          121 c          127 g          232 t
ORIGIN      
        1 tttttaaata gctgaaatcc aaaacgcaag cacacatata ttaacagaaa agcatctaga
       61 tagaactctt cagaatatta ataatgaaga ttttagtgca cgtgttttgt ctccatatta
      121 gttttatttt gctaaacagc ctatgtggaa tataatttac ttttccgttt aaaaaaaaaa
      181 aaatccctgt tccattctgt tttggtttgt ggggttctgt tgtcatttta tcttaaagtg
      241 ctgtttcctc acatttgcat ctaccagcct ttttaatgtg atattccatt taaactgcct
      301 tttaattgta tgtgctgcct tggcagaaca tgactgatgt actagcgtta attagggctc
      361 cagtcagcag cctatgccag ctggaaactg agaaacaagc gtaaattatt ctgtcatcaa
      421 tcagctcgaa aatgtttgaa tcactaatta gtttgcaatt tgggtgacag tttatctgac
      481 gcaggcggtg tcagaaactt cagatcttag atgaataatt tgccagcaac aagcacatat
      541 tccctgcttt taaatacatg aaggtttatc tgcatgttga aaggtggctc agcagtcttc
      601 attaacttcc aactgggact atgtaaatca ggaatcagtg tgaggcactt cagtctgtgg
      661 tggcttagca gatgatattt a
//
LOCUS       KCKM01002154             826 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33860apa ultra-conserved element locus
            uce-6261, sequence.
ACCESSION   KCKM01002154
VERSION     KCKM01002154.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 826)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 826)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..826
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33860apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>826
                     /note="ultra-conserved element locus uce-6261"
BASE COUNT          180 a          194 c          216 g          236 t
ORIGIN      
        1 ggagggaggg aaggaaggaa ggaaggaggc cgggctgatt agcatgcagc agcgctcgca
       61 agcccggctc cattgtttta acacctcccc tctcctccgc gccaatctgt caccgttcag
      121 caggcgaacg ctgctgcctc gaatgctgct cttctcaaat gagacggata attagctgcc
      181 ccgcacgaat ggcgcactct tctcacccct gattgctatc accttcttgc tcctggcagt
      241 tttgacacct cgtaatcagc ctgctgcttt ttctcttttc tttccctatt tctgattttt
      301 ttctccccct tccttcattt tttttttttt taaatgcaat cccagttgcc atttgaattg
      361 agactcctct gttgagttaa ccttgtatga ttgcggggga aaggggaatg tacggtaggg
      421 aggaaaaaag tcgcctcctc tgagtctcat ctgctgagtg aaccatgggt gggggtagga
      481 gcatctcggc ttgatcctcc agtgcttttg ttcgtaaggg ggaacagcct ctcctgagca
      541 tcctctgaat taacatctca tagggaaggg acgtatgtgg agagactcct ccgctcagtt
      601 aatggagaaa agactgcgtt tctatcgagc tatctgttta gttagattca ggaatatgag
      661 gaggggattt tgaaagtaag ttcgcacggc caggaagctc tcttttcctc ccgggtaggc
      721 agggaaagaa ggtaacttct cttgagcatc ttaaaggagt ggattcactg cttgggagtc
      781 ggaagagagc tctgattgga gtgcgagatg gcacagggaa cttttt
//
LOCUS       KCKM01002155             904 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33876apa ultra-conserved element locus
            uce-7053, sequence.
ACCESSION   KCKM01002155
VERSION     KCKM01002155.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 904)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 904)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..904
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33876apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>904
                     /note="ultra-conserved element locus uce-7053"
BASE COUNT          290 a          139 c          150 g          325 t
ORIGIN      
        1 gtaggcacaa tttggagtca ttactgggta ttaggaaagt tattaaaagt cttaaacttg
       61 ttgaggcttt ccacaacacc ttccctatat tttaattggt tttatctagt tccataagag
      121 agctctttaa aacaaatcaa agtgccttaa atcacatgtc ttacccattg aaggacagag
      181 atattccttc tataatctgg caagtttttc taagaactga aggttctcaa tgatgaatta
      241 aaaggcttgg cagaagataa tttaggtgcc ttttgatggt ctcagtttca aaatgacaaa
      301 ataacaatgt tttgcaacag aagggttaaa tcttaatctc agaggtttac aaagctgcta
      361 gtcgcagtct ccttaaaatt taatatacct cgttaatgct taacttgcaa acactgaagg
      421 atttttatga ttataatcat gtgttacagc acctagtact gtttctaagc agcatactaa
      481 tcagcttaat gagatattac tgcacttttt gttgactaaa gcaaaatccc ttttattgtt
      541 ctaaagcttg tcctttactt tattttttcc caaaacatta tcttgtttta ttgtacacca
      601 gtaaatatca taccatcatt tttttgtcaa atcataaacc tatctttctc attgtagaat
      661 gtgtaatata tcgaatatgg ttaatggaac tgaaagttac aaatggattt ctattttggg
      721 tttttttgcc ggcttttcta atggaaatgg gagagatgca taacatttct ttttctatag
      781 atttagaaat gtaaacaggt gcaattttgc aagaagaaag acaggggaga tggtaaaagc
      841 ctttgcccct tctgtaataa ttagattttg aaattgtagc atattttaaa atagtaatta
      901 atgg
//
LOCUS       KCKM01002156             619 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33890apa ultra-conserved element locus
            uce-6068, sequence.
ACCESSION   KCKM01002156
VERSION     KCKM01002156.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 619)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 619)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33890apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>619
                     /note="ultra-conserved element locus uce-6068"
BASE COUNT          186 a          137 c          125 g          171 t
ORIGIN      
        1 aaaaaaaaga ctgggcagtc atttgaatca gtgagtgaca ggctgggcca gctctctgta
       61 tacattaata aattagaatt ttaattgtgt ctctgactgc aggagctgct ccagtacttt
      121 aatacgtacc aacaattggc tatgttatgg aatctgcgat gtggccttca ctgttgacct
      181 ctgcaacaca attcccagtc tgactacgga aactgtttgg tttgatcctt tcaacttatt
      241 tgaatcctga caaataagct cacagctgaa aggtcaacac agtcatattt catcctctgg
      301 agctattctt aagacatctg cacaacaaag cgcttctttt agtacctgac actggaccta
      361 gccagcacaa tctctcatta aaaatgtccc cagtggaaga gtctattaaa aggcatatgg
      421 atcagctatg gatttaccaa ataaaatatt ttcaaaagcg ttaatgtaac actttggatt
      481 atgacgctct acgctgccaa cagaacgtat gtttgcccaa tgacaaaacg cttcgtactt
      541 tccaaaagaa taacagctcg gctctaaagc ctgaggtggt tgtccagcag cctgagcacg
      601 ggggtgggag ccaggaact
//
LOCUS       KCKM01002157             495 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33906apa ultra-conserved element locus
            uce-1889, sequence.
ACCESSION   KCKM01002157
VERSION     KCKM01002157.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 495)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 495)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33906apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>495
                     /note="ultra-conserved element locus uce-1889"
BASE COUNT          164 a           99 c          106 g          126 t
ORIGIN      
        1 ttttttgtaa atcaacaaaa cacagcacca ggcagcatgt gcctcatttt atcaaatggt
       61 acacagcttg gtaatggcct ccccagataa tttgaactga tctatggtga tgaccagggg
      121 gacggcaatg attgtcatgt tagtaaaaaa aatcaaaaca atcatgttac gtcagttcta
      181 ccattaaaag acttgcttct ctgcaaattt ttgcgctcag taattaatac tctagggctt
      241 gcagtttcca agctggtact ccaggcacag agatgccact cacctgataa ttatttcagg
      301 aaaccatgca cgaatgaatg tgattgacaa atgcagcatt gctgtaattg cctcaagcag
      361 agtcagtgag aaaaggagaa agaaagagga aagttaacta gttatgtgct tacctatgag
      421 actggaagca caaaggtaag ggaaaaccga ttcatggcaa tgtaattcgc cgccacactc
      481 gtcaaggagc gacat
//
LOCUS       KCKM01002158             344 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33921apa ultra-conserved element locus
            uce-4095, sequence.
ACCESSION   KCKM01002158
VERSION     KCKM01002158.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 344)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 344)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33921apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>344
                     /note="ultra-conserved element locus uce-4095"
BASE COUNT          107 a           58 c           75 g          104 t
ORIGIN      
        1 ccttcaaaaa tttcaccagt cttttgtatt ccagtcgcag agcaatgggg ggccgccctg
       61 ctcagaaagc atacttatgc aagtattaag aactggctga gataagaagt aaagcttaag
      121 agaccttcat cattagctgc tagtggtgga gattagtgat cctactacag gattacagat
      181 ggaaagagtg ctagtgttgg ttaattgttc attaatgctt gtaaaataag atagcggtag
      241 taaaactttc tattgtcagc tctctcgaag taaaacaaaa ttggctctgc ttgtcaatag
      301 ctgtattgat gttaacggga acatgtttaa cagatcattt taca
//
LOCUS       KCKM01002159             955 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33936apa ultra-conserved element locus
            uce-7574, sequence.
ACCESSION   KCKM01002159
VERSION     KCKM01002159.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 955)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 955)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..955
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33936apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>955
                     /note="ultra-conserved element locus uce-7574"
BASE COUNT          283 a          205 c          183 g          284 t
ORIGIN      
        1 aaaagcttat tttatgaacc cataaatctc ctggaaataa acgttttcct catcttcctg
       61 tgttttaata aaaaatcttt ttttttactc actcaattac aatatcacta tcagttcaaa
      121 ttacaggtca aagctacggg gcttaatgta tgtacagcca gctctcttct cctaataacc
      181 tgtcattccc aggatttgaa tgtcagaaca caggctgccg cagtaatgct acccggcagc
      241 acagtgatga aaactttgga caaatcataa agaacattcc agatccaaat catcagaagg
      301 ttactgggga gagcctttca tcccgctctg accccttgat ctgacaagtg acacctacaa
      361 aatgaacagc tctccagctt aaattgttta actgtagcct gatcagtttt attatcttgc
      421 taatcctgat atcagccgtt tcatcagaat ggaagatatg catatcatga attattttga
      481 caccaagacc ttttaatttt tgccagcgat atttcactac agcaatcagg gcctgcagtc
      541 agtgatgctg ctcgcctcct gggatgtcag aggacagtgc actcctgaca gcaccaaatc
      601 atctgggagc tgtaacgagc tattgctgca attattatta tctcctgtag tcatgcattt
      661 cattacagtg caggcagata gaggtttcgg ttttgggcca gtcttattta ggcatctctg
      721 ccattttatg ggctgtaggg ctccgtagtg taatttcttt tctcctcagt agacaaggat
      781 aggtgaattt ctaataaaaa caaaacacta gctaggtact gcagaaagag ggagcacaat
      841 acagtacatt aaccagcagt gaaacagctt aaatggccca ctcgtagttt atgaaagcag
      901 tggttaatca gcaatatggt ttgctgcaga gagaagtaga gaacagttta tcttt
//
LOCUS       KCKM01002160             762 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33951apa ultra-conserved element locus
            uce-1375, sequence.
ACCESSION   KCKM01002160
VERSION     KCKM01002160.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 762)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 762)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..762
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33951apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>762
                     /note="ultra-conserved element locus uce-1375"
BASE COUNT          237 a          146 c          138 g          241 t
ORIGIN      
        1 acttagctgt atcattagca ctaagaatgg aataaaatac catttatttt gcaaaatttg
       61 tcatggcata ataggaatga aaccttaaaa tcctttttct ttcttctgcg tgtaacagtg
      121 gaagcctgca gcagaaaatt tttttacttc tgtctgtgca tgtatgtaat cagtctgtac
      181 acataacacc ttgttttctt ctgttgcagg catattgaca ggcttgcatc ccttcacaaa
      241 ctatgctgta accctaactg cttgcacttt ggctggctgt gctgagagct tgcatgcatt
      301 gaacatctcc actccacaag aaggtaaagt aatttcaaag gtcttgactt ccacatttca
      361 gtcatgaata ataaaacagg agaagagcta aatgctgcaa agccatttgc tggaaaaccc
      421 caacctaatt tgatgacaaa gtgcattgcc agaccataat tgctccattt tttggggggg
      481 tgcgaaaatg aatcaaactc catacccttt aatgacatgc atctttaata gctgtaatgc
      541 agattaatgg gctttttaat tgctgttaca ttgttcatgc aagagccttg tcattaatat
      601 gaagcatctg aaagattaat gaaagcttcc tcattttact atggctcaga agtaaatcta
      661 gagacagtct gactaaaaag aattgattgt atggcacagt atgaaattga gaatcaaacg
      721 gttgatttcc atggtttctt ttaactgcta aacaccagca at
//
LOCUS       KCKM01002161             842 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33966apa ultra-conserved element locus
            uce-7173, sequence.
ACCESSION   KCKM01002161
VERSION     KCKM01002161.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 842)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 842)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..842
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33966apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>842
                     /note="ultra-conserved element locus uce-7173"
BASE COUNT          165 a          207 c          204 g          266 t
ORIGIN      
        1 ttcagggttt tatttctaaa aataagacat gagggagaaa gcaactgtta aaatctcatt
       61 tattttttgt cagaggccga agaaccgctc tggttcgtac gggtgccgat taacaaaacg
      121 caggacgttt ctttcccctt cagtcgcttc cgcggcgcgt ttcacgttgc cgggtgagcg
      181 cgtcgctcct ttttaacggc tgaaatggtt tgcaaaggcc acttcaagtt tctcggcttt
      241 tcactccctt ttgtgtgaga ctgtcagcgc ctgagccccg gccatgacat gcacagaccg
      301 gctggttttt ctccttcaga tcagcggctc tggacagctt ctctttctct ggcagccgct
      361 tcaacctgct ctgtcttgtc atctccgagt tcaatatctg ctgctctgaa ggaaaaaaaa
      421 tgggatgggt tggaccattg tatttggtct tttgaccctc catgttgccc atgagcagtg
      481 aaggataact tttgacaagc catgtcagat gtgacaggca atctagttgg gttgagtgga
      541 aatgtgctgt acaagtttga agccttagtt gggggcattt tcctggtgtt cagtgcattt
      601 aaattgacac cagacctcag cgttgctcgt tgcagagccc cgcgtttcca aagcgtgcgg
      661 ttttaagggc ttctcatatg cgttttgcat ctcattccgc cagtccgacg cagcacagcc
      721 ctcgccgtgt ctcgttttcc atccccgagg agcacgcatt aaatttagtt tccctctgcg
      781 cgtgtgtttg gcttttattt tcttgtagga gattatgttt tgccgttccc tgtattttct
      841 gc
//
LOCUS       KCKM01002162            1068 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33982apa ultra-conserved element locus
            uce-871, sequence.
ACCESSION   KCKM01002162
VERSION     KCKM01002162.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1068)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1068)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33982apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1068
                     /note="ultra-conserved element locus uce-871"
BASE COUNT          333 a          172 c          221 g          342 t
ORIGIN      
        1 ggctttttgg acttcgtcaa cataaacatg tattcaatag ttttcatttt tatggtaatg
       61 aacatagagg gtcaatgaaa tatagaggga aaagtcgtaa atctgcaaaa gtgaaaccta
      121 cccaaggaac aaagaaaggt caggtaaacc atctgtgtaa gtcacagtaa tagtacctgc
      181 tgtttggttt atgcagggat actgctttat tattctctaa aatggaactt atccgctaga
      241 tcaagttaaa actaaaggaa agctgtggag atgataaatg gcatcgcatg cgtctttcag
      301 aatagggaga cggttgtgtt cctcggtttt tgaatacttt aggttttatt tgtgaagatg
      361 gtgcaccagc aaagaacata tcaagggggc taggaaaaat cactgtttaa tattgcagaa
      421 tttactgctt ccattctgac catgagccta aatttacaca atgaaatttg attatctcta
      481 ataacaatat tagatcctgc actggatgga tgagaattga ggtggttttg ttgattgcaa
      541 gggtttaatg ttgcatttca gaatctgatg tggtttagcc tcccttccat taactggaaa
      601 acccctgagg ttttacaatt atttcttaaa gataatacat ttaagattgc attggtaggc
      661 tgaagaaaag tcataaaggc aagaagggaa gcccttaata actcttgaga ttcagacatg
      721 ttcagcagtt agattggctc tgacttcacc aagggtcgac aatgtgtcat ttccatgaag
      781 ccaaattgcc ctctgcctat atgatattaa tgtgcaaatc aatatttcag ggattaaatt
      841 tcccttcttc attttttatg gtttctacct caataagtct caagtctatt agaagaggct
      901 ggatgattta aaatctttca ctgcagaatg gcttgtcgta gccttgtttc acagaccgtt
      961 tttggatttt cgttataaaa gactgaaggc attccaaaga agttgatagt caatataggg
     1021 acatgcttac tgttgtaaag cccttgttcg attaagagct aaaaaggt
//
LOCUS       KCKM01002163             870 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 33997apa ultra-conserved element locus
            uce-3879, sequence.
ACCESSION   KCKM01002163
VERSION     KCKM01002163.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 870)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 870)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..870
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33997apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>870
                     /note="ultra-conserved element locus uce-3879"
BASE COUNT          280 a          178 c          146 g          266 t
ORIGIN      
        1 aaaaagagat aacaaactcc agaaagtttc caaatgtgat gaatccacga ttactagaaa
       61 tatcttgcag atactgttga ttctagcagt tcaaatccca ccaaaaagaa actaaaagta
      121 acatggtatt ttaaaactag ctttaaacta tacattaaat atcataatat tcaaaatctt
      181 gaattttttt ccactgatgg aaaataattg cttatcactt tgcttccttt aaaaatacag
      241 tacccaagga gaatcaattg atggaaaacc tgatgacaaa aaattctatc ggtctgaagc
      301 aagttttgga gaatctgatt aggtctcatg ctgcaatact aggtattcca tttttgccaa
      361 agggccagct attattatta acatcatttg tctgaatcat tactctgcac cttggttcag
      421 caaacactat gaagatggca tggtaataaa tgaccgcagg attctttcct gcttcagcct
      481 gtttttatct gccacctctc taccgtcagc tccatctttc tgaacctctc tgaatcccca
      541 aaagggacgg ggcgtctatt tgttttccac taggttacca ctctgtctat tgttgtttgc
      601 actaaagggt acgaattcaa ttcattcttg tgacataaaa gcactgatac agtaaatttt
      661 ttgcccaaga gaaaacacaa agttgctgaa tatgggctaa gatgtgaaac actcgtatgt
      721 acgtgaagga gctttccgag acagtcttcc tcactgaata ttgttccttc tccaccacaa
      781 tctagacaat cacattagag cattttaaac tcacactaac cttggcaaat tggtacctct
      841 tgcaaaacag tgactgtgga ggaggggtta
//
LOCUS       KCKM01002164             791 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34012apa ultra-conserved element locus
            uce-2068, sequence.
ACCESSION   KCKM01002164
VERSION     KCKM01002164.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 791)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 791)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..791
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34012apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>791
                     /note="ultra-conserved element locus uce-2068"
BASE COUNT          277 a          146 c          109 g          259 t
ORIGIN      
        1 ttcttgaaat ttacagacaa acgtagataa tttcttttta attctaagat gaaaatcatg
       61 ctgaaaccct cagtctctcc ttttctgtct tcatttgaaa atcaatctca gaaaggggca
      121 aaaaagattg taggtttaaa ctaattagga attaacatcc ttacaattat cataatttgt
      181 tattaacaaa actgagattt cttaccatga ttcacaacag cttctgctga agagaaacta
      241 ttaattacta gacagacagt tagcttacaa gcgagctgca ttttaaaaac ctcctttaaa
      301 atacaattgc taaatgcctt acagtgctgt aatgtgagac aggttcaaat cttattactt
      361 cactgaaatt aaaacctaag ttttaatact gttcaagtcg aacaatgatt ccacacttta
      421 ttgcttttga aatcccttga tgatcatagg aaaaaatgcc ctcgagaaaa agagactctg
      481 ttttcgataa acagaaaata cagtttgcac tcttagcctc tttgtcatca caaaaaaagg
      541 atttaatgcc aattctttaa aaaaagactt tttttcacaa aatgtgcacc ttgtgtgcca
      601 tttgtaaaat cagctcactt tcttttattt attactgcag cgcggcaagg caataaagca
      661 gctactgata gctaataaat tacatgcctt ttaaaacaat tctccagcta caaaaacttg
      721 taactacaaa ggcttacatt tacatggtac atcgtgtgaa atgtctgtat ttatgttcta
      781 gttaaccaca t
//
LOCUS       KCKM01002165            1105 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34028apa ultra-conserved element locus
            uce-2539, sequence.
ACCESSION   KCKM01002165
VERSION     KCKM01002165.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1105)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1105)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1105
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34028apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1105
                     /note="ultra-conserved element locus uce-2539"
BASE COUNT          264 a          235 c          212 g          394 t
ORIGIN      
        1 ctggactgaa gggttttcct tttgtctgaa tatgtactgg tttgtggctc tgctttattt
       61 ccactttcat cctcctcccc ttctctcttc tacctgaaac attgaattaa atctacgata
      121 gtgatatgtt tagacagagg cgacacttga ctataccagt tccttagtgg ctttaaactg
      181 ctggctgcag tactgcaaac aaattcagac cctggcttgg ccagcaggtt ccccccagct
      241 atctgtgtat tcgctctcca ggctttattt tacctgcgct attggagact gcagagtcac
      301 agcctatgtc tcattgttat gcatggatgg gaaatattcc tgtacttatt tgcattcatt
      361 agctgttggt agttcctctg ttgaggtctc tagccttgtt tttacagtgc ttttggcagt
      421 gtttctgcac ttggtgtgtg aatttttatg atctgttgca tgttattcat gcaatttcct
      481 gccctgtaat ggtatcagtt ttccagacac agaggaatac aaacgaaaac ccaggagcct
      541 gcattagcat aaaatgtccc agttctgtca gtttgattaa tttgtctctt tgtctccact
      601 ctatatgata agtgctatta atggttgcaa cacttcatat gtcaaagtct ttcttcctaa
      661 tgacttgaaa atgtggttta tttccccctt ttttgtatta tttttctcat ttagcattcc
      721 actcaagtat agatttatgc catgctcttt cattatctta ctggttgcag cactggagtg
      781 attacatatg gtgtagggta tgagcaaaga tgcgatccca ggggcagcag ctgctgatgc
      841 aagctgaaaa tagatccagc gtatgctcag cacttttccc agaggtcttt tatttattag
      901 gaacagtctt ggtacaggac agcttggacc ctcatttagc aagatgactt tttgcctttc
      961 aagaacagtg caatgacttt gctctattta ctgactgctg tgtaattttt tttcactgcc
     1021 tcctatcgaa gcactgactt tacctaacat aaaatgtaat ataatcctga tttataatga
     1081 agtcaagaaa cgacaggctc cattt
//
LOCUS       KCKM01002166            1006 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34043apa ultra-conserved element locus
            uce-3217, sequence.
ACCESSION   KCKM01002166
VERSION     KCKM01002166.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1006)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1006)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1006
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34043apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1006
                     /note="ultra-conserved element locus uce-3217"
BASE COUNT          334 a          159 c          202 g          311 t
ORIGIN      
        1 aaacagaagg aatccaattg gaaatttgtg gaagaacttc ttaaaaaatc cactgatact
       61 caggtaagtg tttaaaggaa gaaacaatga acaaggaagg tgtcagggat gctttcagga
      121 caaggcattg catgaaacaa agcccaacta acaagcgtaa atttggaatt ctagtgtttt
      181 tatcacaggt aaatgaacat ccttgatgta gcttaactat ggcagtatcc agttccctcc
      241 ttgttagcag ttacacttgc tttaaagtgg atgtgcttga tgctaaactg tcagataaag
      301 gaaaaagata attatcctgg aaggggaggt atatggctac tcagacaaga tgtattcaga
      361 ataaaaactg gatgcttaga aaatgtaaac cagatatgga atgtaaggat atcaagttga
      421 ggagacatga tgagggagat agtcagttgc attgaaaatt cagctctatc ctcatcacag
      481 cgggaaggtg acttgccttg ctgagcaatt tgtcttacag gcttgaatca agctctaact
      541 gataaggttc tagtttctga gcattcattt cataccttat catttttctt tctgcagaac
      601 tgttaatgca atgcttcatg gcccagaggt cagaactgac ctccttttaa aatgctttta
      661 aatatgctgt tcatcctgtt tttaaatatg ttatgttgca gctctgtaaa tttgttctga
      721 agttgcatgg tacaaattgc aaatgccata tcagcaacac ttataaagat ttctttaatt
      781 tttgtatgct taagacaaga ataaacatgt acaatttggt ctcagataaa attaaaaaaa
      841 tccagcaaag ttctactgtt gaaagcagaa gaggaatcag ttcttttttt gattattatt
      901 gccttgctca tgcagtagca accactgtga ttgaaactgg agtaggaaac aatacttgtt
      961 acaactgcag tttttacaaa gagatatttt gtagctgtta agatag
//
LOCUS       KCKM01002167             647 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34058apa ultra-conserved element locus
            uce-2062, sequence.
ACCESSION   KCKM01002167
VERSION     KCKM01002167.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 647)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 647)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..647
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34058apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>647
                     /note="ultra-conserved element locus uce-2062"
BASE COUNT          175 a          120 c          113 g          239 t
ORIGIN      
        1 caaattacag aatttgtctg ggtatggatt acaagtatcc ctaaaatcca agagtgtttt
       61 ttagggtttg atttagttgg ttcagaaaat cctgatccag tgtttgaaat ctttgccatc
      121 aaccttgaaa gcagttaatt cataatttcc cccatttact gttttttagt tctttttaaa
      181 gaaatgcaga agaaaaggtg tttgtaagtg acttcccaaa ttattttttg ccatccatga
      241 gtgtagggct gcctgtttga atgtttccaa gaaagtattg ttcttatgtg acaacaggtc
      301 agaaagactc tgcattaatt acactaacat atggttatta acagattcta gctcagggag
      361 caatacttta caatgttatc ttccacatag tcagatgtta gccatattgt cagtgctggc
      421 agctattgtt tcactcattt acttcacaga gctaattact ccctaataat aactttacct
      481 tggagttttt cacttgcttg tgccagcaaa cctgttcaca ctacatatgc taattattgg
      541 cacttattca ttatgttaag atagctttaa gttcaagctg tgcagcctgg ctttcggtat
      601 ggagccagct ggctgcaaag ttccaccttt tttttttcct ttttttt
//
LOCUS       KCKM01002168            1008 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34074apa ultra-conserved element locus
            uce-1997, sequence.
ACCESSION   KCKM01002168
VERSION     KCKM01002168.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1008)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1008)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1008
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34074apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1008
                     /note="ultra-conserved element locus uce-1997"
BASE COUNT          296 a          218 c          183 g          311 t
ORIGIN      
        1 aggcataact ctctatgtct ctcaaatatc tctgctattt atttcatttt tatagcttct
       61 aaaatgtcag gtgctacact taaagacctc ccttgtactc atcagttttc tttcagaaga
      121 ggttgtcccg agtttgaagc atacaaggtc ttgtcttaat gcttatatga gtacttctgc
      181 ccttggatat tattctcatc ttcatgatgc tatgcaaatc gacagctact tccctgtgct
      241 tccagccaga acttccgcat atagagcgag tagctggaaa ataaaaaaag gggtgtgagc
      301 gtcagaaata tagaagttca gccctgagca tgtctgcata tgtgtgtata ggtatgtatg
      361 tgtttgtaga tgtgtgcaca tactgtagtt tgaaaagtga atctgtgtaa atcaatgcat
      421 ttatttagct ctctcaccaa ctctctccct gagttaacac cccagcacac acaatgctag
      481 cgaaggtgat tatctctgct agcataattc ctctgtaaca tctgctttcg cccataacac
      541 tccactaatt tttccctcat ttcattacac ataattttct ttcaacacaa tctacatgta
      601 ttaagtggta atgactttcc agttaagagc aaatcgacgc caagggaccc ccccctcgat
      661 tgcctgccgt gcctgactcc ggctattaaa gataaatttg gtgcctcaga aagctgcagt
      721 aagctaatca atcaattaag cggttaggac atacattatc aaaattccac agtgcggggg
      781 tgcatgagag catgctgata tatttggtat gattttagga agaaaaaaag gaaaaaaaat
      841 tcaagctact aatgaataca atttgaggtt gaaagtcaat attcagtgtc ttctgaaatg
      901 aaaactccag ctattacaca ccaccgacaa cttggtgtct atgctcgtac aatttccact
      961 gcagcttttg tacctcatgc agtttaccag tgataccaaa atggagct
//
LOCUS       KCKM01002169             270 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34090apa ultra-conserved element locus
            uce-4730, sequence.
ACCESSION   KCKM01002169
VERSION     KCKM01002169.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 270)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 270)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34090apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>270
                     /note="ultra-conserved element locus uce-4730"
BASE COUNT           97 a           46 c           52 g           75 t
ORIGIN      
        1 gaatatccaa aaaaataacc agtttttttt tccagccgct ggaccttatt gaatgtcatt
       61 gaagaaagtt ttgaatgcca gataaagaga ggcgaattaa agtgtgtgac agcagaggat
      121 aagcaaacac aaagagaact ctgtcacact ttgggcaaaa tccgtgggct ttttaccaag
      181 cctcttcgct atgattgaat taagtaatag gaaaacattt tctttcagtt tagagccatt
      241 agacaaaaac ttcaaaggga ataacacttt
//
LOCUS       KCKM01002170             379 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34105apa ultra-conserved element locus
            uce-554, sequence.
ACCESSION   KCKM01002170
VERSION     KCKM01002170.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 379)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 379)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..379
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34105apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>379
                     /note="ultra-conserved element locus uce-554"
BASE COUNT          108 a           75 c           82 g          114 t
ORIGIN      
        1 gggtgggggc ggggaaaatg ctgcagtttt cgtgaaataa taaggtggaa aaaaaggcat
       61 acaaagagta ggtttttcat tgtctgtaaa atataaacac agatgaattc tgtctttggt
      121 ttgttcatgc ttttcactct gcacagcagg gatgttctta agaagttgcc ctctgcgaaa
      181 tttcactaaa tggaaaccgt ggaccctgca tgatgcgatt ataatcacac cagccattct
      241 ttttacataa ttttttgttt aaaatccagt agtgcttctt gtttttaaaa cacatatcta
      301 tatctacgcg cgcatctaaa acggcgccag tttgcgtccc cccagcaaag cgcaagctga
      361 ggcagtaact ggctgtatc
//
LOCUS       KCKM01002171             616 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34120apa ultra-conserved element locus
            uce-6401, sequence.
ACCESSION   KCKM01002171
VERSION     KCKM01002171.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 616)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 616)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34120apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>616
                     /note="ultra-conserved element locus uce-6401"
BASE COUNT          187 a           97 c          116 g          216 t
ORIGIN      
        1 tggattaaga ttgtccagag catcttgatg atggcatctt aaaacttctg agtgccttcc
       61 tttgcaactt tgatgttgtt ctaatgtagt ttgtgtgtac atgtgtttaa tatatattgt
      121 tttttcagtt atgaaacgac attaacaggc tgcacttttc aaatattttt ataaaaattc
      181 tgagtttagc tttctgaaca ggtttttgaa atcaatacag agagagctgc taacaggagg
      241 taaactacaa accacaaaca ctttcaatag gatagctctt tttatataac atttgatatc
      301 attttcacag catgatctct actttcatac tgtgatagct tttacctgga gtttagatga
      361 ttcatttttg tagtggatac ttaactttta tatgaggaaa atgcaagaga agccagcaca
      421 gccttaaatg aactatagtt gcagcattaa atgaactaca gtacagtaat aatgtagaat
      481 gctcagatcc ttgccatcgc acagggttgg atttgtgaat gctttatcag tccaaaactg
      541 aggagatgcg gaggcctgaa atttttctta caggtttttg gcatatctaa ttcaattttt
      601 gaaagcagat tgggcc
//
LOCUS       KCKM01002172             639 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34136apa ultra-conserved element locus
            uce-5782, sequence.
ACCESSION   KCKM01002172
VERSION     KCKM01002172.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 639)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 639)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..639
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34136apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>639
                     /note="ultra-conserved element locus uce-5782"
BASE COUNT          184 a          138 c          113 g          204 t
ORIGIN      
        1 aaatctttac cacgtaagca atgccatctg atgtagagat aaatgcagct ataaatgtct
       61 gagccatctt tgttacgaaa ggtggggaga aattgaatcc ctgtactaat tttaatttgt
      121 attcacacat tagctatatc taatttgaaa acaattaaaa gacaagaatg agaaaaccag
      181 atgtgcagca gtggaatgcg ttacagagaa gcaggcttca ctttgtgtta ttttctaaca
      241 cacggtttta tttttgctgg tgtctgtcac aaatcctaaa atgccattac agagttagca
      301 gatggttccc aagtattcat acctgataaa gcctcctggg tgatcaagca ccgaaaaatc
      361 aatatatttt tcaactttca atggctagct attcagtttc attacatctc gctattcctc
      421 catggctact gtgatatgga cacttacttc accattgcat taagctctaa tctccgagcc
      481 ggctgataca ggcagttaat gaatagctgg agtaccacct cggtgtgctt cacaattctt
      541 ctgatctcag taggatgttt cgagtactgt gatcttgtgt ttagtaacac cccacttctt
      601 ctcccatttt tttttccaca catgcactga cacccctct
//
LOCUS       KCKM01002173            1040 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34151apa ultra-conserved element locus
            uce-1560, sequence.
ACCESSION   KCKM01002173
VERSION     KCKM01002173.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1040)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1040)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1040
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34151apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1040
                     /note="ultra-conserved element locus uce-1560"
BASE COUNT          294 a          246 c          189 g          311 t
ORIGIN      
        1 ttgcagtttg cgtgttgcag agctgtgaaa caatttggga ttgtcattca gcacggggta
       61 ggatggagaa ttactgcacc agagtccact aagtgcagat ttctacagtc ctgaaacgag
      121 agacccccgt ggaagctgct tcagctaagc accagataca ttaaaatttt tcaattacgt
      181 aaaaggaagg aggccttcct tgctgttagt tcttccccac cacacacaaa acaaacacga
      241 gagatttata ttagctattg ctaattttgg ataaagctgt ttatatgaag aacatagttt
      301 tctcccatta ataataataa taaaaacccc acaatgccat tttgaaattc tggacatagt
      361 ttcccccaat ttcaattgct ctcgctccct gagcatttat cagctacctg attagaattt
      421 gtttccacac aaaccattga tcatcagcct attactaggc aaatgacagt taattaccca
      481 ctacattaac cactgggacc tgagacctgc ttctgctgcc atcagtcaac atgataaatg
      541 tggcaagttc agtaatgcat ggccagccct gagctgcctg ctatagtgtg aacaaccctc
      601 aatctcactt ccaggcccag gaaaatctat ggcaatctgc ataattacaa gctctgggtt
      661 aataacagac aaatgatttg ttgcatctaa acaaagtcct tggaatgggc ctggtctcct
      721 gtggctgccc aggctgctgt tgtgccacca gtgtgcttcc cactacatcg tgcacaaaac
      781 agatctccga cgctgtatcc ttccaatttg ttgccctcca atttatggat tctgcatatg
      841 tgatttttaa tcattaaaga actcttgaag caatattatc ttaattattc tctgctgtaa
      901 ccagggaatt aggcttcaga taaaattttc ttcttctgtg cactttcctt gcctcactgg
      961 aggctccatc agttttcatc tacacctgga ctctgaaatt ctaatgatga attattgccc
     1021 cttttcctaa gagggcgaac
//
LOCUS       KCKM01002174             985 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34167apa ultra-conserved element locus
            uce-2953, sequence.
ACCESSION   KCKM01002174
VERSION     KCKM01002174.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 985)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 985)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..985
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34167apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>985
                     /note="ultra-conserved element locus uce-2953"
BASE COUNT          284 a          231 c          219 g          251 t
ORIGIN      
        1 ggcatgttcc tcgggctccg ctctagctgg ctcagcctat tgtacttgga agagatggag
       61 aagtcatgtt ccaaaacccc ataaaataat aaagcagagc gctgtttaaa acaaagcagt
      121 ggctttttgg gccattatgt gctccagata atacaccaat gacactaaat tgaactcatt
      181 tagctgtaaa cataatattc catttcacag tttccagcgg taaaccaggc ctcgctgtgg
      241 agaaaagaaa caatatgcaa tgagcaaagc tcatcgcaag agtacccaca aaagggtcaa
      301 gaaaaaaaca ctcaagaaaa aaccagcatt tttcagtggt ttggagtcat aactcagcta
      361 agacacacat gataccaaaa gcaacctgcc caatttaaac agtggagagc aggcactgga
      421 gtttatgttg ttcccctgtt tatttaaaac ggatgggagc acttgacaga aaaatcaaac
      481 ttctggtcat ggctcattaa tctctgttgt atctgtcaga tatgtgtgtc tagagtttca
      541 acaaggctct agaatcaaga ttactgctga gctcttttgt tttctctaat tttgaaagag
      601 gggaaatgct gccaatcatc ctatacgaga ggggagcatg gtgccattgc tccagccctt
      661 tgcagggggc atgtccctgc cccttggttc ggatctgatt tcagaggcag caatacctct
      721 cttccctcct catcacaatc tgagttttgg ctggctgcct cccctctccc ttgaaaacca
      781 gagtgactgc ggaccaccaa agcacatccc cattggtgtg accagggcta tctgtggtgg
      841 atgctccttc atccctgctt ttgcacacaa aagtgttaat cgcactaatc cactgaagac
      901 agtggagctc ctccagtgta aaaccagggt aagtgatggg ctcagcaggc ctagagtggg
      961 ctcagcagga ctgaaacgaa tatgg
//
LOCUS       KCKM01002175            1016 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34197apa ultra-conserved element locus
            uce-2784, sequence.
ACCESSION   KCKM01002175
VERSION     KCKM01002175.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1016)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1016)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1016
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34197apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1016
                     /note="ultra-conserved element locus uce-2784"
BASE COUNT          302 a          213 c          221 g          280 t
ORIGIN      
        1 aggtagagtt gaatgtgtag ctgcacgcag agccaccact agaaggaggg aatgaaagct
       61 catagctcaa acaagaaagt atttgaaagc caggtggaca tgtgaaaaca tgcctaattt
      121 aacttgtcac ctttaaatag acttaatgtg gctggagatc ttaggctgct tcaaatgtac
      181 cccacgtagg tgctgtacat atgctgaatg cataatataa ttgaatatgg aacagaaagg
      241 ggatcagtcc ccggagaggg agattgtttc ttcaaactag acattaatga taaagtgagt
      301 gacatttatc tccggtcctt ttatgaatca ctgagatgca aacactgaac accttgcctt
      361 tgctgtgagc tatgcctcaa gccatgggaa gctgcctgcc attcacaagc cagtgccttg
      421 taggcagctc catcttacct gagttcgcag atgggccatt ccccaggtgg gtctggcaaa
      481 acacttctca ttaatcattg cttaaagccc tctcagtggg aagacctcag gttagacatc
      541 atttggaaac aaattgggtg aaaaatagct ctgacaataa ggagcccaca ctgaattccc
      601 ctgtgaaagc ttcagcggtg tgaaaacaga ctcttccagg acactaaatg atctgtcagt
      661 tagcaaatga cattataatc cagttttatg ccacagacaa atcaaagcct ttactgcact
      721 tcctcatttt tccctctttt tttttatcct ttccctcctt taaagtgact gtgtagttga
      781 gttaggggag gaagagatct gctacagagc ttacaaaaca tttttcagta aggtgaaata
      841 gtataagatc gtccattgta agtgatagag acgaaagaaa atatctcaga aaggaggcaa
      901 agtgtttggt atgtgaccca ggaaagaaag gctgaagttt ctcttctgct ttgccactgt
      961 gcccccagta ccctttcact atgtccttca catttatggg cagagatcct gattct
//
LOCUS       KCKM01002176             407 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34212apa ultra-conserved element locus
            uce-4654, sequence.
ACCESSION   KCKM01002176
VERSION     KCKM01002176.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 407)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 407)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34212apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>407
                     /note="ultra-conserved element locus uce-4654"
BASE COUNT          131 a           62 c          106 g          108 t
ORIGIN      
        1 aaaaaagaaa aaaaaagaaa gaataaaagt ttaataaacg tgtgctgtgt tgtggatgac
       61 tttgtggcga cctttgttgc aaatggccta tgcatgcgga ataatggtct ccgtgcagag
      121 agggaaatgg cttagcgcta tcatcgttgc ctcggtaacc atcagagtct ccatctagca
      181 gagagaaatg agttatgaaa aggcttgagt gaagaaggga ttaacacatg atcccaggga
      241 cagcatgtca atcaaaatca gcggagaaat tacactgctc tatttgagaa tgtctccgga
      301 aacgcaacct tagtgggtgt atgtatgggg atgtatgcag gcatgatgga gagatgtata
      361 gctctgagcc ttgtatggaa tatatatatt ttttctgttg caagata
//
LOCUS       KCKM01002177             667 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34228apa ultra-conserved element locus
            uce-5566, sequence.
ACCESSION   KCKM01002177
VERSION     KCKM01002177.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 667)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 667)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..667
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34228apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>667
                     /note="ultra-conserved element locus uce-5566"
BASE COUNT          198 a          116 c          119 g          234 t
ORIGIN      
        1 agaaagagta acctccttgt gattatgaat ttttactcca ttcggtcgtg catcttgcaa
       61 caagacctga ttgtgttgta atatttttag aaatgttaca accacggttc ttccttccta
      121 cctgtagagc cagctcttag tctccatcta ctgctgaact tgttttactg ttactcacac
      181 cattgtcaaa gtgcatgcta aaaattgtag attatttctg ttcactgcac actacattgt
      241 tttaccatgg ataatgtttt atttataagg aaaataaatt gtcagagtta aaaaacacag
      301 tgcattttgt tctaggcaac acattgcttt tatcacacaa ataatttatt ggttctgctc
      361 ccagacgagt tctgtgctga cctttccagg tatactgaat attggtgcat aatttgtctt
      421 gttgggaaaa agtatttatt ttagccatta atacatgctg tcataacctt tgtgttgagg
      481 agcaagttta ttgttttaat tctgagacaa aatatagagg gatgtacaga aaacaaaact
      541 tcctatctta atgcctttgt attctaagga agagctatgg attagaatct gaacctatca
      601 tataatgtct ggtaatggat tggagccaaa actaggacag tcttaattcc tgattatggg
      661 gcagaca
//
LOCUS       KCKM01002178            1088 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34244apa ultra-conserved element locus
            uce-1423, sequence.
ACCESSION   KCKM01002178
VERSION     KCKM01002178.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1088)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1088)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1088
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34244apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1088
                     /note="ultra-conserved element locus uce-1423"
BASE COUNT          331 a          221 c          197 g          339 t
ORIGIN      
        1 gtagcaagct gtctgttaaa gtgaaagaat tttgagaagt ctaggaaaat ggtaagaagg
       61 tgactaggct tgtgttgtgt cttgtccaac ccacaagtct tctgcaggtt atttttctcc
      121 ggtacaaatg taatttaata atcgagatgg atattgtttc actttcagct atctgctcta
      181 tactccggtc tcattctaca ctagatgatt accttactgt cctatatgca caatttaaag
      241 ggaattacct attacttcaa ttatttgttt cttatcaact gatgttacac tacaaggatt
      301 tgcattgaaa ggacacaaag aaagagcaag tcatggcaca ttgccaaata aaagagtaat
      361 gttctggtga atttagccca aataatttac tgctatataa aagtggaaaa gtggaaggtg
      421 aaccctttga ccaataaatc tcttctgcat gtgaaaccct tatcttgtcc cctccaatat
      481 attccacact aggaagccat catcattggc tctggtttgt tatttgtaaa ccttgatctt
      541 ctgcactcgg tgtcctaaat atggataatt agcatcagtt tatcacgcct ctgcatattt
      601 tctcttctct ccaaacatgc atgcttctat tggctgccat tctgtcacag aagattatgg
      661 agacagattg cagagaatga atgtgctaaa cgagattagg aaggaataga aatagcaact
      721 tggccaataa attcctcgtg agagccttat catacaatta cacgttgact tgtttcacac
      781 tctcccagcc tcttaatcca acgcccccac caagaataaa atttcactaa tttctgaatt
      841 actgcatatc ctcatgactt gtcactgaga atggttggaa gaagcaacac ggtcaaaaat
      901 aacacatcaa acttccaaaa agaaaagaaa ctttatagac agaaagagat gtggcttgaa
      961 accgtgtgtg gccatatgta aaagttcttg ttcctcctca gtttgaaggg cgaaggcttc
     1021 agtatcatgc ttcctccatg cttttactcc ctaatacctt gcatttggtg ttatggcatc
     1081 ttgtagag
//
LOCUS       KCKM01002179             807 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34259apa ultra-conserved element locus
            uce-2797, sequence.
ACCESSION   KCKM01002179
VERSION     KCKM01002179.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 807)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 807)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..807
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34259apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>807
                     /note="ultra-conserved element locus uce-2797"
BASE COUNT          226 a          183 c          169 g          229 t
ORIGIN      
        1 atcccatttg tagcagcaat gccagtgctg ggattcaaag tcagagcctc ttagggttac
       61 agccctgctg ctgcttctgt gtgagtggaa gcatctaata cctctggcat cagagactgg
      121 ggctgataaa gagacaaggt gatctaaaga gagcgcacat ggaattttcc cccccttttt
      181 gttttttctt accagagaga taaaggagat gagagtgggt tgatatttga cgaattggtt
      241 ttattcagag gagcgctatc atttttatgt cctttttgaa aacgcaccca cagtgtctga
      301 attcctgtta atgcaaagtt cagataaagc tgatgaaaag cagctgccat cttgatagtt
      361 gccatggcag atggcatcag cctttatgct tttatcagta ttagtatcag aacacactct
      421 gtgttccaag ctgagataaa aatcattgaa gctgtacctg gaataggcag atcaacactg
      481 caggtcccac acagttttga atcttttcag aacagtctgc ataaaagcta gagacaacac
      541 attcttgtta ttcattagtt cagcagtgct gatggtattt tgtaaacttc acagatgaag
      601 cagcttttct aaagagctgc tgcctccctt cctccttccc tcccaccccc aggaatgctc
      661 aggctttgaa aagaaaaacc acaccacata cgagcataca cgcgtgcgtg aaaaacactt
      721 taccctgagt ggacaatgga cagtgacgtt cctccttcac taacttgctg cattttgcac
      781 tgcacctcaa tcaatctgct gtgaata
//
LOCUS       KCKM01002180             890 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34275apa ultra-conserved element locus
            uce-6246, sequence.
ACCESSION   KCKM01002180
VERSION     KCKM01002180.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 890)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 890)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..890
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34275apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>890
                     /note="ultra-conserved element locus uce-6246"
BASE COUNT          273 a          195 c          194 g          228 t
ORIGIN      
        1 gaggatgcca cccagaaaga aaaaccgaac gctgaaaccc tgagcccaca gtccccaaca
       61 tctggtccct taacagctat taggaaatac ttttccgtta ctgacaaaat aaaggccgct
      121 cgacggcgag caagccgacg gcgtttaaac gaaacattac gcccgctcac gcggttggta
      181 ttttcggatg caggacctac cataggcaca ataaaattct catgtgtttt aattcattta
      241 cgcatgcctg catttaatat gctttgtgac catgtctgca attaatatga tttatgagaa
      301 aagaacatgt gcgatatttt ggggtgtggt gatacttttt tctcctcctg tgaacgaaag
      361 atttaatgaa acagctcaag gaaaatcgtt ggcggttaac gtattaagtt gaactgacag
      421 aatcgtgagt aaacttcagc ggagttaatg atatcctctt atctgaccct gacacatttg
      481 cagcatgtaa tttacagaag ctctgtccag ggaatcttga cgaatgctcc taacgatgtc
      541 agggcaatgt tccattctaa tgcaaaacag atgtgggtca gataccctca ttcatcacca
      601 acacggaaaa tgcgatgaac catcggcgtt acctgctgtt aactcttggc gctgcgaaaa
      661 aaatctctcg aaacaaacta tcgcacgaag aagaacacag aaaggatggt cgtaacgcac
      721 tggagtgaga aattttggag attcattaaa attaattagc tacgtggagc tacaccagca
      781 ggatcctaca gccacgttgc ggattctttt tatacacacg atgatttgtg ctgaagacat
      841 gaaggaaccc gacatttcgt gccaagaacg gggaaccaca ggcttggttt
//
LOCUS       KCKM01002181             809 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34291apa ultra-conserved element locus
            uce-1420, sequence.
ACCESSION   KCKM01002181
VERSION     KCKM01002181.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 809)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 809)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..809
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34291apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>809
                     /note="ultra-conserved element locus uce-1420"
BASE COUNT          220 a          164 c          171 g          254 t
ORIGIN      
        1 atcacagtct ggctggtatt ttaaaagatc ttttgcacac atttggatac agatgagaac
       61 aattaaatac cctctaataa ttaatgtata tacaatctat agaatgcatt ctcttcttat
      121 tagaggctgt ggggtttttg ttgcaatcta gctaataaag gctttctttt ccacaagaga
      181 attttgacag ggttgactcc agacggcttt ccagctgagg tctggggcct tgctgaacct
      241 tcaaaatttt cccatttgag ctgcatcaaa gtgaaggaaa ttcaaggatc actaacgtct
      301 cagatggtag cacttgccct aacaaccaag gttcaggaat tctttggagc aggctgaggt
      361 catttttctc cccttttctc ctaatgcttt tctctattaa tcagagctca cagctcagat
      421 tggtcttcaa cttcctccca atccttgcta agcctgtcat ttctagctat tatttacttt
      481 aatggacttt ggctgatccc ttatgaagct ttggatctga gaataataag gctggagagt
      541 aacgggcaca gacatgggtg tgggtttgcc tgcagattaa ccgtggcaga tgggctttat
      601 tgcggtttcc tgtgtgccga gtgttgattg agagggtata atgagagagg tggtgtctgc
      661 acaatggctg cagccacttc attgcacctc gcgtctaaac aaccccattt ttctaaatct
      721 ttgggttgtg aaattttagg aagtcagagc acaagaacaa gtacaaaaac aactgtaaat
      781 aaccatgaat gttaatccaa ccctaattg
//
LOCUS       KCKM01002182            1067 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34307apa ultra-conserved element locus
            uce-4212, sequence.
ACCESSION   KCKM01002182
VERSION     KCKM01002182.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1067)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1067)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1067
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34307apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1067
                     /note="ultra-conserved element locus uce-4212"
BASE COUNT          289 a          280 c          222 g          276 t
ORIGIN      
        1 gcgtcactag ctgggcagcg gcggctctgg aaacaccgct ctgaaaacac tgacacacgc
       61 caggaagaag ggtgggctct ggagggggaa cggcccacgc agctcttgcc caagtcacaa
      121 cgccccaatg gcaccaaccc aaccaccgag gtgtgcacag accacgtagg cttaaccccc
      181 tggtcttcac ctgtctcaag gactttgcag gcctggaggc caccgaaccc ggtggctccg
      241 gccaccactc cctccacgga gcacccatgg tacggcgtaa acacaggctg ccctcacgta
      301 tcatgctact gcaaacttga gacaatctac aggtcagctg tagccatttt tggagcagcg
      361 cggatgtctg gaagggcctg ccaaccgaga gccatcacca cggcaaggac tccctttctc
      421 acccagctgt ggactatatt gcatctgaca tgatgagcat ctcttgaatc tacctttcaa
      481 attttcggca aaccattttc tcactgtcct tcacaaagtt gacattttcg gcagcatgat
      541 aggaaagatg tcatgtcggc tgcttttcaa gttgttgtca cagtggttag caccagttct
      601 gtcatctttg ctttcctcac aatcccccat cttgagccat gtcacaaata ataatacttc
      661 caatgttttt gtcaaatttc aaatactata acccagctgc acgtcttcgg atttactagt
      721 tatgttaatc tttgttgctc atcttcccag aagctgaagc attaggaact cattaattag
      781 tgacaaatgc aggatataca tagaactgga aaaacactac ccaaagcctt gcacttaatt
      841 tattagctcg ataattttga aacctaatta aatcctcaag tcaaatatac tttgaaaatg
      901 taatcttttg agggaacata tttattttcc ctttcgtaag aacacaaagg gtatatagct
      961 tagcgccgct ataatttaag atccacttct gtgctctaga caattccagt acgtgatggg
     1021 gctggaaaac atgaaaagct gaagtcgcac cagcttgttt ggaggct
//
LOCUS       KCKM01002183             890 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34323apa ultra-conserved element locus
            uce-5675, sequence.
ACCESSION   KCKM01002183
VERSION     KCKM01002183.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 890)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 890)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..890
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34323apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>890
                     /note="ultra-conserved element locus uce-5675"
BASE COUNT          278 a          173 c          174 g          265 t
ORIGIN      
        1 tatttggttg acttcaaaat tttaagattt atggaaaaac cacagtgcaa tacttccaat
       61 gacagcagtt ccgtggcttg atttttattt cagtaagttt ttcataactg gtttccattt
      121 atttcttctg aaaccctgtc agtaaaaaaa ataaatcagc atttcaaggg gccaagtgaa
      181 taaacagact taaccaaaaa gttttgtaag tactgtttta atttagagtc aaaaagagat
      241 taccaaccac tcgttttgtt aggtttaatc taaatacctg ctccttgaat ttctctgctg
      301 ggaggtattt atattatcta ttcagcacta cactaaccgt caggctgact gttccctgca
      361 gctctgctga ctcaaaataa tgacttgtag gggagctcta atgacagaac aaggggcaat
      421 tacagacaca gcacgagcct tggaataacc gtgtgatgta ttttgcgcca ctgattgacc
      481 tcgtgttcag gttcatttgg gctctgctac catagatctg gcttacacct gaaggtatag
      541 ggcttgttaa tctcaatata agaagacaga ttagatcaca ccagattgtt cagaaaaggc
      601 aaaacagctc tggcgctggg ccaataaacg gtagcataaa gatgagttgt gaaagcaaat
      661 attcctgtgg ttacagtcga gtctgtggtg aacagattat tcagccactt ttagtgttca
      721 ccctcgtatg aagacgagaa tgctgctttt tcccttagat attcgagaag actatcagga
      781 atcttgaaag gtcagaataa actagatttc ttaagaaaaa aactaccatg agaaatggtc
      841 tatggaccaa gagcaaaccc aatgacacta catcccttca cgttcttgtc
//
LOCUS       KCKM01002184             873 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34338apa ultra-conserved element locus
            uce-5777, sequence.
ACCESSION   KCKM01002184
VERSION     KCKM01002184.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 873)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 873)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..873
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34338apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>873
                     /note="ultra-conserved element locus uce-5777"
BASE COUNT          285 a          179 c          167 g          242 t
ORIGIN      
        1 gttgacaaat gtaaaacatt aaaaagaatc ttcatagaag cagttagaag caagtgtaga
       61 gtacaaattt aatcccccta atcccttgtc aattataagg aatctcctag cataaagttg
      121 tatcaacagt gcagttttca aacccataga aaaataaatt aagccatcct ttccctcttt
      181 ccacttggac tgtattcact gtagctccct caaaggatta ggaacactgt ctgtaataaa
      241 cacaggcatc aatttttaaa atctgctctg aaaatggcaa catttcacaa gctgtgaaaa
      301 tgctttggtt tagggcatgg cctgagaggc aataggccag caggatagca ctgggattag
      361 ccctaattac ctcatgtttc accttaatta actactgata cagaaggtaa actctgcagg
      421 atccgtggcg agaccttagg ccagtaggca agatatctaa gccatcattg tttacacatg
      481 ataatctctc ttttgaattt actttaattg ctcagaaaga ttagctgaag gatatgcatt
      541 acatattgat tagcaatgct aactagataa tatataattt tcatgtatgc tccatacatg
      601 cagtctacca gttttagagg cacattcttt attacctgat tgtcaaagga tcaacatcta
      661 actttgctta tgatagcatc aatcatgaag aagaaagacc ccagcctttg gtaacgtgaa
      721 cggagggaga aaaacacaaa aaaggatctt cactctgttc tggtagatac tattgtgctc
      781 ctccattgtg tgaggtaatc ccctcctgca cgcatcccag ctcagcacaa gcaaattggg
      841 agcacagggg gagcggcaat gaagcaggca gga
//
LOCUS       KCKM01002185            1073 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34354apa ultra-conserved element locus
            uce-3584, sequence.
ACCESSION   KCKM01002185
VERSION     KCKM01002185.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1073)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1073)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1073
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34354apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1073
                     /note="ultra-conserved element locus uce-3584"
BASE COUNT          328 a          222 c          177 g          346 t
ORIGIN      
        1 gacaaacttg tgaccaaaag caagaaagat gagaaatact gtgcaaacat tacattgtac
       61 ttgactgttg ttgatttgct ctagatatta cagaaacatt ccaataaaag acatttatct
      121 acccacatat cacaggagcc agatacaaac aggtaagtta aaatataaaa atcctgcctt
      181 atatgccttt tattgtttag gtcaatcatg gcataatttt tgtattatct tgattgtagc
      241 tgcctgcaca ttattatcag aaaaaatgga caggcagtat aacagctgag agtttttttt
      301 ggtcaggtta taaatctctc ttctttatgc tgtcaagagt aagggagaaa catatttcaa
      361 cagcaacttt aaaacgaaac tcacgaatta ctaccattat gttaagtgct agatatccca
      421 ctgtgcagtt ttgctttgtg aatttttacc ttcttccatg cacactttta gccactgatc
      481 gcacagcctt tcagtgtttt ctgccttctc ctttaaataa actggctctg gctccttcca
      541 tctggttccc cttccgtcag caaccctgca cctgttcaca cctcctctcc tgttggattc
      601 cactgaacat ttcctcctct gccagggcta ttctggcact cgcaaccttt ctgtcattca
      661 atccatctgt cagaagtgaa ctttgtttac cgcaagcttc tgctttcttc ttcaagaagc
      721 aaagcccctc aaggtcattg tcaaatgaac tgtcggtgtg gatttaaatc tacttctgct
      781 aaccagcaga agaagtagtt ctttacagtc ctgtatttgt gaagatcagt ttggtgtata
      841 ggaggaataa tacagaagca agagcgtaga ttttaattat catttgttaa ctccaacagc
      901 taatgtgttt ttcttcctat atgtgtatct gtaccttctt gcagagacta gcagaatcta
      961 aaatgtgcag acctatgcaa agaagtggaa aaggctaaca aaaatataac aaataaaata
     1021 ataaatgaca gtttttaact ctcattttaa cacaaagata ttgactaaaa atg
//
LOCUS       KCKM01002186             648 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34370apa ultra-conserved element locus
            uce-1662, sequence.
ACCESSION   KCKM01002186
VERSION     KCKM01002186.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 648)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 648)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..648
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34370apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>648
                     /note="ultra-conserved element locus uce-1662"
BASE COUNT          198 a          141 c          112 g          197 t
ORIGIN      
        1 cactgtactg taagttgcaa actgcaatta caattcgctg caattatctc tggttgttaa
       61 tagcacaaga tagcatgtca ctttctacca agtgtataat ttatcatttg tttttttttt
      121 cccccttcat gaactcttgt ggtattccaa atgtataatc ttgttgtatt tatttcccag
      181 tggtccaaca aaatgcacag caagtgctga ctagaacaaa ctaaaaggca gtgctattga
      241 caagccgtca cttgagcggt aatgaacact ctgcctctac tttcacctcg ccaaactaac
      301 agctttaatt tatgataaag caaacgagag acaacctcca gttttattat accctcagtg
      361 ctgtttcaaa tcaagtaatt agaaggtcaa gaggcaggtc tagaaagcca aatacaaatg
      421 caagccctct gcactgacat ttttaaaaaa tcttgactgt tcaaagagca ttttatccat
      481 ccctcttcgg cagagcagcg caaggcagtt tttaccaccg taaccaatct gaaacagtgt
      541 ggttcaattc tttgctgagt aattcagccc atatgttaag aaagatacct agcagataat
      601 gtcccttccc caggccttta atttaagaga gaggtacagg tgagtttt
//
LOCUS       KCKM01002187             813 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34386apa ultra-conserved element locus
            uce-8041, sequence.
ACCESSION   KCKM01002187
VERSION     KCKM01002187.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 813)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 813)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..813
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34386apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>813
                     /note="ultra-conserved element locus uce-8041"
BASE COUNT          195 a          184 c          181 g          253 t
ORIGIN      
        1 tcagccttac tttagtcaga actaggtcct tttcatttaa atcatatttt acacaacaca
       61 ggcctgaagc tgtagctggt cccttgtaat tcatgtgaag cttgttggtg gtaggtagga
      121 cacctatgaa gttatttgtt ttccaaagaa actttttttc ccctgtaaaa aaagcaaaat
      181 tttaaaaaag tcacccttat ttaccacatc ttcacagaat ttgctgaagt ccttttccct
      241 cctggctgta tctgcccagt gctttgaaat gcttttgcct attgctgtgt gcatgcacat
      301 atgcctgctg caaatttttg tgtgtgtgca tatttatatc tcggtggctg tgttgccaag
      361 gagctctgaa agaaagcaga gctgagataa cttctaatcc acctttctgt gataatgtgg
      421 cgcaagtgaa aaaagccagg ggtctttctc caccctagct acgctccagg tttggtagac
      481 tggggccttt aacaggcact tgggactctt ctgtctcagg tctggtgctt ggcaggagag
      541 aaagcaaata cctgggcgaa tggcaactgt aggccttcac tcgaagaaga cttagaagct
      601 gaatgaatat ttctggttga gtctgggcag acagccacca tcttgagtca tcttgtgcct
      661 gctatcagca ttctccatta atttccccca tccatccttg tggaaaaggg gtcatggagc
      721 ttgaggggat ggacatgaaa tgattgtacc acccttcgat agttcctgag ccgtgagtcc
      781 ctctccttgg tttctgttcc tcccaaggtt ctc
//
LOCUS       KCKM01002188             669 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34402apa ultra-conserved element locus
            uce-3291, sequence.
ACCESSION   KCKM01002188
VERSION     KCKM01002188.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 669)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 669)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..669
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34402apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>669
                     /note="ultra-conserved element locus uce-3291"
BASE COUNT          188 a          117 c          133 g          231 t
ORIGIN      
        1 tatctgttgt ttggcaattt tgctaagtct gtcttcatta cttcaacatt gtgcatttgc
       61 taatttggaa gccccttcct attgacagct ctgctccata cacctgcaag caatttgcag
      121 agctccaata taggagaatt gcagagatgg cagctcgcac ctattttatt tttttttctt
      181 cgcttttctc aatgcacagc aaatttggct ttcagtgcgt tatctctttt gttaatgcaa
      241 aaagattccc tgggcgaaaa aattgctcat aattaccaga gagatgggga aactgcatta
      301 gaataaataa acctgaaatt actgtaatta tgttgtgttt gatgggctcg gcttgtaatc
      361 aagaagagaa tacagtgaaa tgatgctgac cctcttgggt ttgcagctgt acgcgcactt
      421 tggggtcttt ttttgcagaa aagagtcatt ttgatcatca ttaagctgtg tgtaacctat
      481 ttcagaagtg tttgaaaatg aggggcactt tttttttctt cccaacaagg aaaaaatata
      541 tcccaaaatt acattttgcc atttacaggc tcatccataa ggttgtgttt gcggggtgac
      601 aattgttaaa ggtataatat tcgaaatcag gacttaatca ttgtaatgag gtattgtttc
      661 aatataagc
//
LOCUS       KCKM01002189             749 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34418apa ultra-conserved element locus
            uce-7627, sequence.
ACCESSION   KCKM01002189
VERSION     KCKM01002189.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 749)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 749)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..749
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34418apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>749
                     /note="ultra-conserved element locus uce-7627"
BASE COUNT          259 a          133 c          131 g          226 t
ORIGIN      
        1 ttattattta ataatatgaa agttttggtt tatctcaaga aaatatttat agtagtttta
       61 atacacagga tccatccttg acaggaacga tgaaacagat ttatcaccct tgacaaatta
      121 tattgcaaaa cgtcctctcc tgactgctta caacaggaat attaacaaca cacacaactg
      181 gaacaccacc tgcaattctc atttctttag gctaatatca tagcaccctc aaatccctct
      241 tcatggagac tgtacagtac tcggaatgct agttacttat aagagtaatt ctatgaatga
      301 ctgaaacctg tagcccttta aatcaaacta agtagcgttt tattaaagtg cccagcaaat
      361 caatctaaat ccaaggataa taaagctcta atcaggtggt agaaaaaata ataggttgtc
      421 atgcatgagg aaaaataggc aatcatggaa tgttttcttt aattaggttg tgtaaagtgg
      481 aaggactgag taggaactgg caagacattc atcatgagaa aggtgggaaa ttatttagat
      541 tactgaggaa ggaaaattga gtttgaaata ctaagatttg actggacaga aaattaaaac
      601 cattttgcta ttcgtgccac ttactttttg gcaacttatt agcaggtatg gccttccaat
      661 gtagcatgaa tccagatatt tctgtagttt aaagaccccg tacaactcac tctaactttc
      721 aatggtgtta gtgcacacac attcagcct
//
LOCUS       KCKM01002190             902 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34434apa ultra-conserved element locus
            uce-4641, sequence.
ACCESSION   KCKM01002190
VERSION     KCKM01002190.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 902)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 902)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..902
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34434apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>902
                     /note="ultra-conserved element locus uce-4641"
BASE COUNT          264 a          201 c          183 g          254 t
ORIGIN      
        1 ctgcagcagg aggactgaca cagaagaggt cctaggccag ggacctctac ttcatcttgg
       61 gaactggatg aaaagtagcc atgagctggc accgtgcaga gttcgtgtct cagctgcgag
      121 cactgaccac aggcttggta ccctgctccc tcttaaacac tttccatgaa gggcggaggg
      181 agtaggcaca aagcccattt aattaggcat cgtgtaggaa ggatgaactc catcccaagt
      241 gaaaaggagg attgcgtgtc tcctccagat ggtgaattat tttaattttt tccaaggcag
      301 gagaaagtaa gcaggtgtga gtacagggcc tacctgtatt ggttttaatc agcaacttta
      361 agcaaactca gtgttctcat cagaaaaagg gaaaaataaa cagctgagca ctgtgattca
      421 tttacacttc aaatatactt tgagttggtt attcctcaat taatcaaata gctggtgtat
      481 ccctaaagta gtataaagtg acacgctgtg tgaaatcaat tttcccttcc aaaatcatta
      541 aattcagtag cctgtgacta catccctgct aattctagta ccggtccttt catcctccat
      601 taactttggc acgcctaaca ggctgtcaaa aataatttcc cagaacgtaa ataattcaga
      661 aattaaaaat taataaataa taacagagag ctactgggag atagactggg tcaattagtc
      721 agctctgcat tctgtttctt cgcagcaggg gggcagccac attcgttact agaatctttc
      781 ctccgattcc taggtctgat ttacggctct tcattactgg atccagtcag acacaattac
      841 ctccatcact atctcagttc ctaacttcaa agaaacacac attttcttgt ctgctttttt
      901 tc
//
LOCUS       KCKM01002191             892 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34450apa ultra-conserved element locus
            uce-2639, sequence.
ACCESSION   KCKM01002191
VERSION     KCKM01002191.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 892)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 892)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..892
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34450apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>892
                     /note="ultra-conserved element locus uce-2639"
BASE COUNT          309 a          170 c          149 g          264 t
ORIGIN      
        1 ttttttttaa atcaaggcat ataatcttat actacggtgc caggtatgca caggtcacat
       61 tgtgctcatg tctcaaacaa ggttaagtgc aaacatacag atttattcag atttgcaagc
      121 atgcaacctg ttacttaact acattaatac cttctctcct aaaccaaact agtatctata
      181 tgtttgcttt cacgaaccta gaatctttct tttcaggact cctaaaacaa gcagtgtctt
      241 tgaattctga aatgacacaa atatcaagaa agtccacatt gtgcaagaaa gcagcagcta
      301 tgtttttcaa cttggactaa aaaagaaaag agaaaaacaa aaaccgttca ctgaacagca
      361 gattagcagt aatgttcctc atgaatcgat aagagtgcct gatgctgaat atctaacagc
      421 aaatgctgaa tttgggttta atattttaag ggtttattgg agattaagct tcttgctgtg
      481 ctggtctctt caaatccctg atctgtttaa ctaaataggt cttctcgtca ttaaattgtt
      541 catcctcggt cctgtcattc tgaaacttgc tgaggaactc aataagtttg gtctggttct
      601 ttagaaggat gtctaatata ggctgtgtct tgttaggatt ggctacaaac acctgcaaga
      661 aaataaaagg catttagcgt aatagaggaa acggaagcct aagttaataa caaacccagc
      721 caacaaaaca gcggtgacaa taattattct atattccagc acctctacag aaaaaaataa
      781 caaagtaaat gcaagtttta aaataaaatt cctcctttta ttagaagctg aacactagta
      841 ccaaagtaaa ttaaatttgt gggcagccac aataccctct gcaaaaaaca cc
//
LOCUS       KCKM01002192            1047 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34464apa ultra-conserved element locus
            uce-83, sequence.
ACCESSION   KCKM01002192
VERSION     KCKM01002192.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1047)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1047)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1047
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34464apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1047
                     /note="ultra-conserved element locus uce-83"
BASE COUNT          336 a          166 c          204 g          341 t
ORIGIN      
        1 gccagatatt gtgatattaa aattacagac aatattttaa aatagtttag cattataaaa
       61 aaaatttcta agatttcaac agttgcttct tatgacagtt ttcatttttt tccttcctac
      121 tgacagttcc cataatgact ttaatcatat agtctggaaa tggagcaggt tactgagcag
      181 caacaaactc actggtcaat gtcggtgtca gttttctggg agcaggactt tttgagcatc
      241 aaggaactaa ttttaacagc ctactggaaa agtgttaagt gcattaactc cctgtcaatc
      301 acatttttag catgctggcc aaattattat tatttggctg gagacattct attgaaactt
      361 atttgtatgg tattcttatc tgtgtacctt atgtgactaa tgatgattgt ttatggagag
      421 gtgcctgtcc aattattttt gaaggaacac aagaatgcag aatgactgga agcatcaggt
      481 ttttgccaga gaatgcctca ggtaagagga gaatggctag aggctataag gaatcacaag
      541 agacaagtca gagtcgtaaa ttgggaaact gacatatctc atctaatata cttgctaact
      601 aggcctttaa aaaccttgac atttaactaa gtttgtggaa aagttataga ttttgtcctt
      661 ttctattggc tataactcat taatatgatg aactgaagtg tttataatca ttaccagcat
      721 tagcagacta gcatatggga tcatttagag atccagttaa gcacctaaca actgctcagt
      781 tgtttatgta ggttgtgcct tttcaaagtc aagtcagtca aaaatgatat tgcaagttat
      841 ttaccctttt ggtacttcag tgtgtgaaat gggatgaaag aatgctggta ttcagctgag
      901 acattaaaat aatgcttcgg aagccctggc ctgcttagaa cggactgcaa tctttactgt
      961 aaaacagaaa tttctgatgg tttcaggaaa aaaaaagagt agtgtaaaaa caaattttgc
     1021 agtgaatgct gcctattaac tccaatt
//
LOCUS       KCKM01002193             940 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34479apa ultra-conserved element locus
            uce-5539, sequence.
ACCESSION   KCKM01002193
VERSION     KCKM01002193.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 940)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 940)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..940
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34479apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>940
                     /note="ultra-conserved element locus uce-5539"
BASE COUNT          296 a          161 c          183 g          300 t
ORIGIN      
        1 tggtcgtact taactaggac cacacagagc aaaggagatt ttttaatagg ctgtttggaa
       61 aagagtgaag accctaacga atgaagtatg tagactttga gatctttact gcgagcctta
      121 tttgcttttg gtaacaagct aacctcccat gccattccct cccccctcca attttaattt
      181 gatggaaagc cagcagtact gcagttttat gcaaagcctc cagtgaactc acaatagatt
      241 attatttctc actttgtctt tacgtatatc tttaaaattt tatgcatcag aatgcaagat
      301 tacctgaaaa cacaaatgca acacaacatg aacaaaatca gatgaaaatt ctcactcttt
      361 tagctaggaa gaaattagat ttatcatcag aaaagcattc tcttttcatt ttctgaaagg
      421 tgctttttga cagacccttt gcagtggacg tcatgctcac aaaacatgct gtcacagggt
      481 tatttgaata tggtgacagg ctcattatca tgttgaagac aactgacaac actgcagact
      541 agaaatggac aggcttgcca atcagctgtt gaaaggattg cagttgaaat agaggttttt
      601 tttgttctga gaacagtggt acaaattgac tacattaatt ctttttatta cagttgcata
      661 cactgtagtt aagggtccgt cactgtttcc attataaatc cctgttttca agggtttatt
      721 agtagaccat aaaaaatggt tcctgttgaa attttgcata aaaaatatat attaccctaa
      781 cagaatgaag tttctgtggt aactgtgtgg aggagggagg gcagagaaga gggattgact
      841 gatttttagc tgaaaattgc ataaagctga atgcattatt atttttatag aaacttagat
      901 gtccaagagt tttatagaca ggtttgtgcc tcaggagttt
//
LOCUS       KCKM01002194             444 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34494apa ultra-conserved element locus
            uce-6519, sequence.
ACCESSION   KCKM01002194
VERSION     KCKM01002194.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 444)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 444)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34494apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>444
                     /note="ultra-conserved element locus uce-6519"
BASE COUNT          142 a           75 c           84 g          143 t
ORIGIN      
        1 tcttttgaag ggaaaattaa ttctgaatta ctggccctat aactgcctac ttcttcacat
       61 catctgtcag caaaataagc agacaaaagc tggctaagtg gatttctgtt agctgccatt
      121 caaaaggaaa gagacaggtg ttgaatgaag cttcttttcc caacatctag ttaacaatat
      181 atataggaga agtttaattg cttgcatcca cctgcaccct tgtcatttct tggctttatt
      241 gattttaatg aaaatattaa gtgcacttca ggagtagcag ctaagtgaca tgttgattga
      301 aatatacagg aaaatgtata atggaagcag gctattacag ttttaataga atctgaaaga
      361 agtaagatct agagccacat tttccaccgc tattcttatg catatagcaa gttctgcgag
      421 ctgaataaat gtttggttct tgtt
//
LOCUS       KCKM01002195             488 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34510apa ultra-conserved element locus
            uce-912, sequence.
ACCESSION   KCKM01002195
VERSION     KCKM01002195.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 488)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 488)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..488
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34510apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>488
                     /note="ultra-conserved element locus uce-912"
BASE COUNT          139 a           95 c           88 g          166 t
ORIGIN      
        1 caaatattta aacatttttt ttgttttttt ttatatttct cttttctctc tgtttgtaat
       61 aagattaatt atgtgcggtg caccactgct tatccccatg aaagaaaatc taaaacgagg
      121 gatttcagct tcaagaaggc tattttgtcc tgtttccgat tctaaaggga ttaatttacc
      181 atatcgtata gccctggaag actgtgataa ttgaaaacat ccatattcat tgcatgttca
      241 aagggatctg tctgactttg taatgtaaaa agtgcatttt taacctgaac ggggacctgc
      301 atctggtatt gcttaatcct attagtccga cagttccaaa gctttagtgt ataatcatta
      361 gcttgtgtta atcctcagac atgcctccag cttcagcctg tcagaaggag tccctgcagg
      421 gaaaatgtgg aggtgctgat agcacaacac caactaatct tatcttaaat gctagcagca
      481 gccactat
//
LOCUS       KCKM01002196             652 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34525apa ultra-conserved element locus
            uce-7044, sequence.
ACCESSION   KCKM01002196
VERSION     KCKM01002196.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 652)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 652)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..652
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34525apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>652
                     /note="ultra-conserved element locus uce-7044"
BASE COUNT          219 a          111 c           96 g          226 t
ORIGIN      
        1 ctgattttct tttaaaaaca gttaactaat cattaaaggt aattattaaa ctttaagttt
       61 cagcaaatgt ttaaaataca atgtgctgta gaagctcata taaactccac ctgtaaatga
      121 catctttgca atactcctgc acataggagg ctcaaagcta tttcttgcca gcagcagtga
      181 tccacagact ttagatgttg ttaaaaagct tacaatatca gcagggcaac tgctgcctcc
      241 attagaaaca tgatactaag atgctgatta ataccaggag ggggctttaa tcagccaaag
      301 ccatatgcta tttaacttaa gatgaaagtg caaatgataa tcattatttc agaaaggatg
      361 tatttaaaag aagagcagaa cagcaagtgg catcttttta tcattagagc ttcttcatgc
      421 agcccttttt ttctaaaggt ttataagctt ttatgaacat ctggatcatt tcttcattat
      481 ataggcttcc aatatcatta tgtttgatgt agcattttca gtggagctat gctaaacttc
      541 taaatataca attaatacct attaattata gttttcaaac tggtgaaatt atccatcatt
      601 aacttaatca cttgtatttt atcttaaaat tgtattcact cttttataat cc
//
LOCUS       KCKM01002197             980 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34541apa ultra-conserved element locus
            uce-1395, sequence.
ACCESSION   KCKM01002197
VERSION     KCKM01002197.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 980)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 980)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..980
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34541apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>980
                     /note="ultra-conserved element locus uce-1395"
BASE COUNT          288 a          183 c          237 g          272 t
ORIGIN      
        1 caagatgggc aacatcaaat acttacatca ggtcatgctt tgacaagcca atgggaattt
       61 cagactattt aatatatgtt cctatacaag ctagtgtaag catttttttt ttttccatcc
      121 ttgcattctt cagcgttctg gaacaaggtg tctagcatca acgttttgaa gaaggcagca
      181 ggatcgttcc tacctccttc tgaaaaaagc tgtgtgcttt tactatccct ttctatcaca
      241 ttagccacct tagatggtca caaaccaatg actgacacat gaaagtagaa gaaaaaatta
      301 taaaaaagct atcatcagag agtttttctt caggtggttg ttacaggggt gttcttcgct
      361 cctcgctggc atgcgtagca atgtggaggg agggagagtg gaaagaggta atggagggaa
      421 aagaaatctt accttggctt caccagtggc aacatgagca tatgcaatta taagatagct
      481 ggcagatgac agagttagtt aatgtaacaa gccctgtaaa gcatttagcc acattctagt
      541 gtttaatcag ctgtgtaaag tgcaatatct atctttcaat tttatgccat taagggagac
      601 aagattttga ttaggtactt aatctgggca agaggaaaac aggcccagag caagcccaca
      661 ataggcagca gaagggacat tcgacgaagg attcgataaa ggagaaagac agaaatttaa
      721 cataaaagag aattagtgca gctcctttca atttagtgca cagattttta tggactaatc
      781 aattagaggc tgtggctgtg ctgctgggaa gtggtgccgt gttagaggct ttgccatatt
      841 aattccgttc attaccctga ggtcagccgg agtgctttgg agaagccccg ctgctgagcg
      901 ggtcatgtcg tgggtatcgt ccctttgttc caaggggcga ttgggtaaag ccagcactga
      961 acggcagttg ttcgtagagc
//
LOCUS       KCKM01002198             576 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34557apa ultra-conserved element locus
            uce-5667, sequence.
ACCESSION   KCKM01002198
VERSION     KCKM01002198.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 576)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 576)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34557apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>576
                     /note="ultra-conserved element locus uce-5667"
BASE COUNT          189 a          119 c          138 g          130 t
ORIGIN      
        1 caaaagctga gacatttgtg ctgaggcaat gaaatacaat tgttgctaga aacgattctt
       61 cacttctcaa gccccagctg taacactgca acaatacaag aactgaaata aaactaatac
      121 tgtgtcataa ataggaggcg tgtttcttcg agtggcattc tttaattgcc atgacactac
      181 ctacaaagaa atcctttatc taagattaca gggcagcttt tgcaaagcct acatccatga
      241 aataatgcaa cgaaaggctc agaaagctca cccttgcctg tatgcctggc ggagctgact
      301 aaaagaccag tagcagctgg caggaaatgg gtaagaaagc tgaccacaga taaactgtag
      361 gatgctaaag agtagcagaa gatatactct gggagaggaa gccaagctgt caggtcacac
      421 tgtagtctag tgcatacagt acatacagtc cgctattgaa gtatgcggcc accagataat
      481 ggtcagggga cacagctgtc aggcgacgat gaagtaactc caaggagcct aaagcagagt
      541 gtggtacagc tgcggatgtt tctgttgagc aggata
//
LOCUS       KCKM01002199             467 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34573apa ultra-conserved element locus
            uce-6105, sequence.
ACCESSION   KCKM01002199
VERSION     KCKM01002199.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 467)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 467)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34573apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>467
                     /note="ultra-conserved element locus uce-6105"
BASE COUNT          160 a           88 c          102 g          117 t
ORIGIN      
        1 gttttcatca caaacataaa tgtacttggt ataaaacaga aggtcaggaa ggtttaagac
       61 atggtatatg agaaaacatt ttccagattt cagcttcctc caaggtaata tgcaagtgta
      121 attaaaacag aacctggaaa tatagagtac agtactctat tgaaagtgtg ttgtatgagc
      181 tgaactccct tcattgatag ttttccaaaa cacacagctg caataatctt tatccaggag
      241 aagggaataa attaagtctg aacacctctg catatagtac agtacagtgt acagcactgc
      301 accccatata acctctgaga ggtaatggaa agctgaagga ggcgcaagtg gaaaacctct
      361 cggaccagca aacactttct tcttcagaaa gcatacagat gggaagaaaa gctcatgaag
      421 cagaggcggc ttaagtactg ggacggcttg tttctgaagc ggtctgc
//
LOCUS       KCKM01002200            1001 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34589apa ultra-conserved element locus
            uce-6945, sequence.
ACCESSION   KCKM01002200
VERSION     KCKM01002200.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1001)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1001)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1001
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34589apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1001
                     /note="ultra-conserved element locus uce-6945"
BASE COUNT          318 a          193 c          227 g          263 t
ORIGIN      
        1 gcagcgcagt cacacacgcc tataggtgag atgagaacca gactcgcctt tttagtagcc
       61 tctaaatgcc gctgtatcca aatgaacttt ttcattaaat ggggcgtaca gcacaagtcc
      121 aggtggcaaa aacgtgagat taacttgcaa ggctgaggtc tagccatcac agggtaaaaa
      181 agaaattttg gtgtagtcag caggcgcccc aaatctccac tggcaacatt ctctagaaaa
      241 tataagtaaa ccctaaaatt ccaggtcagt gtcttgtgga aaggacctcc ctctcccagt
      301 ggtttccatt tcgttttttg aattattaaa agatcaaatg ctggaatgct ggatagcctg
      361 aattcatttg tcagatcacg aagtactcat aacatttctc agccttaata acacatctgc
      421 tcttaaaatg tggtctcttg ataatagctg gctgaaagtg tctgaattta gggattattt
      481 gagacaacag atttccttct atttggaatt gaatgaggca tctgctccct caccgtcagc
      541 tttgtgggat attctcaagg caatcataaa agggcagatc attttgtaca ttatgagaag
      601 gaaaaaagac ctctgttggc aattatgaga cttggaaggg tgaattaggg acccacaaag
      661 atatcacttc gtgtccaaaa aatctagcta ctccgtccat tctgccctct gcatagagtg
      721 ggacagattt atctgatgag cagagaggga gggggcaatt ctcctgtcaa agccaatgtt
      781 aacgaaaagg aaagagaaag aaaatgagtc aggaaaggat gtatgcgctc catcttggat
      841 aactgaccca acaacgtatt agagagatta ggaggtggga tggagagcaa ggcatgaatc
      901 ccttggtgga ttaaagggaa ttctgccaat atgtatgcca gtttgctacg ttggaaaacc
      961 aggacaaaaa aaaagagtgc ttgcaaatta tttaacacat a
//
LOCUS       KCKM01002201            1083 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34604apa ultra-conserved element locus
            uce-1530, sequence.
ACCESSION   KCKM01002201
VERSION     KCKM01002201.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1083)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1083)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1083
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34604apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1083
                     /note="ultra-conserved element locus uce-1530"
BASE COUNT          314 a          223 c          202 g          344 t
ORIGIN      
        1 ataaaatgca tgaagttcag aactcagatt aaaagcatac aaatctgaaa taattttatt
       61 gatgactata ttctgtgaac tcaaaaaatc cagagagcac aaagttgata atgatgattt
      121 tttaaatttt tccttggaaa attcaaattc tgtaggctgt ctagcctagc agctcttatt
      181 tgtatttgca aaacctatat gccttttttt acagcacaca tggtggctat tggtatgcac
      241 aggcacaatc taatattgtc ccccacaaca aaagccatca ttctggcaaa aggagacagg
      301 aaaatctaac gctctcctac catgaccaag atggtaagag ctgctgcagt tgccaaatac
      361 gatacacaaa acatttaatt tataatagtt agaacttggc ccttgaccaa gcccgaagaa
      421 ctatgtctta tttcacttgc tcttgaatat gtctctttca gagataaatg actgtgctgt
      481 ttgccagttc tctcctctgt ttggcgtttt gtttagctcc gcttgtgaca agccaagagt
      541 tgatgcatct gcttgaatgt gtaatataca tctttggtca acttagcttt tttccttgac
      601 aatattatgt caaacaatca catcacaact ggctctgatc tctttgttgt tagctaataa
      661 attaaagagt atttattatc tgcaatcctt ttttcccttt taatggtgac acatttgtgg
      721 tgaattacag ggcagcttta taaactaggc tgtgggccag tatcagcccc tgcgttcatg
      781 tgaatgttcc ctctcccact tggcctccca gcctggtggt aaatcaaggc agctgtcaca
      841 gcacactaag ttagtgtgcg tcattgggga aagcaggaag cgttgggggt ataattctgt
      901 ccatcaaact aatatgttat atcagtagct ttgtaatctt ctgctataag ttatgggaag
      961 tgacacctaa gaattcactt tgaaagcaat gtgttcctca gactttaagc caaaacagac
     1021 ccaatctgca gcaagagttc ctctgtttat acgagtggat ttgtagcagc tagccgcccc
     1081 atc
//
LOCUS       KCKM01002202            1101 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34620apa ultra-conserved element locus
            uce-4789, sequence.
ACCESSION   KCKM01002202
VERSION     KCKM01002202.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1101)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1101)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1101
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34620apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1101
                     /note="ultra-conserved element locus uce-4789"
BASE COUNT          291 a          237 c          175 g          398 t
ORIGIN      
        1 taaaatgcat atgtgtgtat atacataaat gtatggatat gtataaacac aaatataatt
       61 ttaaatcatt ttttctttat taaactaact caaagcattg tgtatctgac cagattttta
      121 agccatgaac tgttttcaat tttttctttt gcatatatat aatttttttg tcacatctca
      181 tgcctttcat ttggcttaaa tgtttcattg tagattatca gcatctgtag aatgctgaat
      241 gggtaaacca gcatttcttt gcctctggcc tcatccccag tctcgcacct aaggaatagc
      301 tgctggccct gccccaatcc catcctggtg tttggatcat gctgctgtca gccaggtcct
      361 ttggcacggg attactgaat atgtttccac cttcttctgg caggattccc ttcaatgaag
      421 atcccaatcc caatactcat tcatcaggac cctccacccc tctgaaaaac caaacctatt
      481 ccttttcacc ttccaagtcc tacagtcgac agtcctcttc ttctgacaca gatttgagtt
      541 tgacacccaa aactggtaag gcgcttccac ccgctttttg tttaatttgt gtttttgtat
      601 tttcattcaa cccctttttg ctttttggca ttcaagttat caaaatgatg tggaaattgg
      661 agacttcaga tagcgcacct cgagcttgaa agagtttctg taggatgaaa atttaaatcc
      721 tgccgctgtc tccacttttc tgtataaagt taaaatggca tttgtagcac acctgtattc
      781 aagtcaaaaa tcttggagca ttaaggagtc ctaagtgttg cccttttctt atttcctcca
      841 tttcatatca catgagagta catttctcac cacaatatgt taaggacagt gttagtaaaa
      901 ctgcgtggtc ttcaagccta atgtgttgtg ctatgagtat attgtgtaag tttcactgtg
      961 attttaactc ctttttgcaa aacccaatac tagaaatgta gcatctactg tctttttatt
     1021 ttccttggtg tatggaaata gctttccatt atacacagta tttttgaaag tatccagtca
     1081 tcttcacaaa gcatttttct t
//
LOCUS       KCKM01002203            1105 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34635apa ultra-conserved element locus
            uce-7673, sequence.
ACCESSION   KCKM01002203
VERSION     KCKM01002203.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1105)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1105)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1105
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34635apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1105
                     /note="ultra-conserved element locus uce-7673"
BASE COUNT          275 a          241 c          236 g          353 t
ORIGIN      
        1 gtgacttcag aaaggtccaa tttttttcaa ggggctgtga taatggcatt tgtttgatat
       61 aaaacttgtg agagaagcta ttaagctgca ttgcttccaa gatgtcatct tttcacagat
      121 gaagtgggtg tttctgcccc aaatacaaaa aaaaaatgtg caaaacgtct gggaaggtta
      181 tgtaacggta tgtggcacta ttcttgtgcc ttctggtctg gaatgaggtg tgttagctgc
      241 atcacctcac ctgttgttag attcgcttgt taacggtaat ctgaaattcg gaataccaca
      301 attagtgtgc aagcacaaat tctttataaa tcatacatta ttacagcctc cccccaagcc
      361 ctggattcta gctcagttag cgagcttttt ccacaagtgt gtattagctt tttggacatg
      421 ttagacaccc aggaaatccc ccttctcgta acattctccg cttggatctg atctcaacag
      481 ggtgtcgtag tcaatcttca gcacagttct taagtggaga ccaagaaccc tgggccttta
      541 gaggtggtct agcaggagag ttccaggtat caatatgact tcacaactga atgacatttt
      601 ctttgtttta tgagaaacct tttgttgcac atcagaggtc tggaaggatt ggtctgccga
      661 aggctttctg gtccaaagcc cattagcctt acagcttgtt ttaaaataat tttcctcccc
      721 tttctacagt aatttctcaa ggagatgctg cctgtcccac gcgcatgcga agcgcagcgg
      781 ctttagttgt acatttcaca ttgtttcttt gcaggtcgca cagcattttt atctgcgccc
      841 gcaattgcac aatgcgcgca tgcttgtctg ccaatgggaa ttccatgagc aaaagagcta
      901 aattttggtt cctctctaag taaagctgta atgtgctttg ttgcaaatac ttcaattggc
      961 aggtattctt aaattgctgt ttataccatg ttcagatttg ttcatggatt tttcaggcgc
     1021 tatacttttc ccccctcaca ggtgctctgc gcgcagcaaa ttgagtcagc gcattgcttt
     1081 tgggataaag cgtctcctct ggcca
//
LOCUS       KCKM01002204             568 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34651apa ultra-conserved element locus
            uce-1133, sequence.
ACCESSION   KCKM01002204
VERSION     KCKM01002204.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 568)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 568)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34651apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>568
                     /note="ultra-conserved element locus uce-1133"
BASE COUNT          187 a           93 c           95 g          193 t
ORIGIN      
        1 gcaatatggt gtcaagaata aactttaaaa gggctctcta aaagtaatgc ttggaaggta
       61 ttcatctgac cttcagtgac agagcttatg ccttgcaaat tgattaatac agatacaatg
      121 tcaaataatt tttcatacaa ttttttaatg tttgttaaat gctggagcag tatgtaaaca
      181 gagtatttgg catttttatt aggctgcgga actcagtcat ttcctttgca acaacatctc
      241 ataaactatt ttgacagtct aataaactat aaaaagctgt ggtaaaaact ggctctgaat
      301 gttataaccg tacaaaatgg aaagagcaag agaaaacatc tatcactgag attattatca
      361 ctgttgccat ggcaacctgg ttgcaatggc aatatctcca tggttctgct gtttgttatc
      421 atctttcttg attttacatc attgaaattg tagtaattac actctgcctg atgaaaaatg
      481 catgctgtca tggcaactaa gtcaaatatt cttaatcatt tcacctcttc aatctaaaat
      541 gtaattgttt gtcagtaaaa taggttat
//
LOCUS       KCKM01002205             375 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34667apa ultra-conserved element locus
            uce-748, sequence.
ACCESSION   KCKM01002205
VERSION     KCKM01002205.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 375)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 375)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34667apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>375
                     /note="ultra-conserved element locus uce-748"
BASE COUNT          108 a           78 c           81 g          108 t
ORIGIN      
        1 ttctgcttaa tgcacaaaat cagtaattaa atatatttct gctggtcttg tggccatatg
       61 cctgtaatat gtaaaaatat attttctttt cttttttaaa ttccttttgt tcccagtact
      121 gactgcctgt cagagtgaac cctccagatt cctgtgtgct ggtatccatg ggctctttct
      181 tgccaagctg ccagtctgga gcgtcacacc ttgctgcctt taaagattgc cctgcagaga
      241 tagaggaaaa tggcaatttt tacatgatgc agtctggcgg cccaggagat ttgaagtcag
      301 aactggtgcc aagatttacc caggagagca agcagaggca aaacagagaa cctgggccaa
      361 aggaaaaaaa aaaaa
//
LOCUS       KCKM01002206             732 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34682apa ultra-conserved element locus
            uce-7775, sequence.
ACCESSION   KCKM01002206
VERSION     KCKM01002206.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 732)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 732)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34682apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>732
                     /note="ultra-conserved element locus uce-7775"
BASE COUNT          237 a          129 c          115 g          251 t
ORIGIN      
        1 aaaggacttc cttttccttt attactttat agtacaacaa aagcctgacc tgaaagttaa
       61 taaagagagc atgtttacta attaggcttt actctcattg gtccatgtta attgcaaaat
      121 atcaatttat ctcacttatg aatatgcaaa tgtatgtcag agtggcacaa gtttccagta
      181 cgcagtactc tgctagcttt aattagatca aaagcgggtc cagctcaatt caacaagatg
      241 ggtcctactc tttaatcagg aaaataagtt tgtctcctaa cagtatcttc ttttgacagt
      301 cagcaaacac taattaacag acatagctat attaattgca ttaccccact gtattcttat
      361 cagctagctg atgttgcctg tttgctaatg caaatagttg ctgctttggt aaagtcaact
      421 tgcaaaagtc tttctaatgc taactagcaa tcaatgcata taagatttct aagatttctg
      481 tagggaattc tgcataatag atgtgttctg tcttttgagg tatccacggc catttagtat
      541 aattattcct tagagctgca cctatcatat tatcagcttt tttggaggat aaagaacaca
      601 acttatttgt ttaagaacaa aggactataa taatttcctt taggaatcac taaatcacta
      661 agttaaatga agatgtatga caatggaaaa cttgcattta tagtaattat gcccttaaga
      721 tttctttaac at
//
LOCUS       KCKM01002207            1093 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34697apa ultra-conserved element locus
            uce-6084, sequence.
ACCESSION   KCKM01002207
VERSION     KCKM01002207.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1093)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1093)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1093
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34697apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1093
                     /note="ultra-conserved element locus uce-6084"
BASE COUNT          293 a          267 c          284 g          249 t
ORIGIN      
        1 ccaggcaaag ggctgatcta caggagagag ctgggcagaa ggaggtgagg gtgcgtgggg
       61 cctgggaacc ctcccacaca gctccacagg gaagaaaagg agttgaatga agcaacaaac
      121 tctgcacacc tgggaaacag ccaaaacttc acagctttcc ctcctcaaac agcagtaact
      181 gatttttttt ttttcctctc tttctacaaa ggtgcagcac actccaggtg gaaaccaggt
      241 accagcatga caccagcact ggaagaggaa ggatcgtgga agcttgctcc aaattagaaa
      301 cacgcagaga gcaacatttc ttcttcccag ctgccagaag aggatgcgat caggacttgg
      361 acttactttc accccatctc tgcccccaaa accccatccc aaaagcaggg tggggaaagg
      421 actaatgagc tgctgatagc cggagagcag atcgcagagg ctccactccg tctgcccagt
      481 gttcagacta cctgttcagg actacgagat tgtacagtag tctgcacatt ggttaggctg
      541 tgctgggata caccacacac tgccagtgcc gcacggggac ggcaacacct gcacggcagc
      601 gggacatgct tggagagggt gggctgcggg gatagctgca tgcagagctc acttatccct
      661 cagcctggga gggtataacc cttgggagcc atgcttgatg atcactttta cctgcctgtt
      721 caccatccta ttcacaaccc ttttattcct cctccatttc tctcatcccc ttcttatttc
      781 tttcagcttc atgcacttgt tccaggagca gttgtgttca gggtggcttg tgtttcagat
      841 gctaaacttt gccatagaat gcagagatag acacacaggc ctagcagagt tataactgaa
      901 ctgtgccttg ccacctgaga agacgggatc aagcacagaa aggtgactgg aggaagggga
      961 tttcacattg taaagaatgc tggtcattaa tctaaagaaa aacccacaaa ggattgaaag
     1021 ttggaggttt gggtggtctg gaagttgggc ttgctttgat gtctgtctgg aaaagaaaga
     1081 agagaaactg tga
//
LOCUS       KCKM01002208             595 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34713apa ultra-conserved element locus
            uce-2732, sequence.
ACCESSION   KCKM01002208
VERSION     KCKM01002208.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 595)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 595)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34713apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>595
                     /note="ultra-conserved element locus uce-2732"
BASE COUNT          141 a           90 c          164 g          200 t
ORIGIN      
        1 ggggggtggt ggcggaaaaa aaaaaaagcc tggagattgg taattttctt ttggtggact
       61 gcgcaatagg tatggtaatt ttaaaagagg gtgatttata tgagcttcag taaatgctgc
      121 atattgtatt tcaaagagtt tcctgtcatg acctcataaa aagaggagga ggcttgtatg
      181 tgttgcagcg cctagtatat gtcgattttg ttgcatcgtt gggcagcagc gctgtaagaa
      241 ggaatgtcag cttttacata acgctctttt tgcttttgac tctgtgaggg gctgtaaggg
      301 tccatctttg tgatcacaga tggagtggaa tggcttgaaa atggtaagtg aacggggaga
      361 gcctgctcgt ggggttttgt ctcacttctc gtgtgcatcg tgaatttctt ttgttcgggg
      421 cggcagatcg tgagtcataa aataaaatta gagacctttt tttttttttg cgagatatgt
      481 ctgcctgtgt gcgtgcatat atctatatat ctatttaatg tatctaactg tgatggcact
      541 tcatggcgtt tccattgaac gttgcatttc agtcgagcga ggatggtctc tgctg
//
LOCUS       KCKM01002209             632 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34729apa ultra-conserved element locus
            uce-3489, sequence.
ACCESSION   KCKM01002209
VERSION     KCKM01002209.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 632)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 632)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..632
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34729apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>632
                     /note="ultra-conserved element locus uce-3489"
BASE COUNT          254 a          105 c          115 g          158 t
ORIGIN      
        1 acaaagagcc aagattttca ggaatgagtg ctaaagctat aacactaaat aagcctggct
       61 catttaaaaa gcaactctaa aattcctcct actcctgcac tcattttaaa atcaccaata
      121 agcactagtc agactgcaga aaaactgttt ctaccagcag gcttctgaat atgcataatg
      181 ccaataaagc taattacatt tcaaaaataa taatctatgt gcaattaaaa tactggcaac
      241 attttaatgc aaaaaattgt ttaaatatac taacatccta gtcttgggat atccagtcaa
      301 gctacgcaaa gagatgcgtt tgtcccttgc atactcccaa atgtggaagt aggatcacaa
      361 actggatctg gaagaaaggg taaacagcat gttagttaaa tacacagagg atactatgtt
      421 cggagatgtt gcaaacatta gtgaagacaa atacataaat gacctggaga gaaaataaat
      481 ttagtttgga aacaaatgtg tctcatgaaa aataacttca aacgcgcaat gtagaggaaa
      541 cgtgaggata ggggaagaaa aagtaaaatg aaagaaacct agaagcagca acagtggaca
      601 atcagatgaa tatttgcatt gaaaaatagt tt
//
LOCUS       KCKM01002210            1073 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34745apa ultra-conserved element locus
            uce-7295, sequence.
ACCESSION   KCKM01002210
VERSION     KCKM01002210.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1073)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1073)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1073
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34745apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1073
                     /note="ultra-conserved element locus uce-7295"
BASE COUNT          330 a          244 c          178 g          321 t
ORIGIN      
        1 gatttcagga acgctgctta cagtttacac tgcatgaaca caagatacag caactgcact
       61 agtccagtcc tgcagaacat tccactaagc agtcttatct gtacacggaa caactcttat
      121 caaagctgct tctcttcaac attcatccac ctctgtctgt gagatcagga tgagtgtgtc
      181 ccctccatca gaaagaaaca atacagcacg taatcaaggc acaaccaaaa atttaaaata
      241 catttttttc ccctcttgag aatgcttttc tgtacaagtg gtttttgtaa tctaacactg
      301 tgtaaaaagc tatcagcttc ttcaagatgg ccactgtagg catgataata ttccaggaac
      361 acttaaattt ttacaataaa atttaggtcc atatcattag attactttat atgcactggt
      421 ctctcatctg attttaggcg ttttctacgt ggttgtataa aatcctcatc ggagtcctca
      481 gttatttcac catcatcctc ctcctgctca aattcaggca aaggctggaa ggtcctgtct
      541 gggtagatct ctgtgagttt atcttcaaag tacaatgcaa ctgccttccc tgcctgcgct
      601 acttctgaat cagcctgtaa acaaaagaag acaggaatat tcacctgttg gaaatgcaca
      661 tcccttcacc aagtgtgcat ggtctgaaac gcttaccttc aaattaatct cttgtgtttc
      721 tgcataaact tgaacaactc tcatcatcta aaaaggatac cagagtcaaa aaaaatgaaa
      781 ttataatcct ttctaaagtt atgagattgc ataggattgg atgactacag tcagccataa
      841 caacagaaca gtttgttatg gactacacct ctttagttct caaacttatc ggaagcaggt
      901 ttaaaacagt cttacgagag tgacatgagg taaataaaac ttcaacaaaa cacacaactt
      961 ttgtacaggt aagtgcctcc cagtcgtttt caaaactgca ctcgactcat gactgctctc
     1021 ctcattataa actttagttg cctggacctt actgtggaaa agtctcgctt tag
//
LOCUS       KCKM01002211             527 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34761apa ultra-conserved element locus
            uce-6171, sequence.
ACCESSION   KCKM01002211
VERSION     KCKM01002211.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 527)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 527)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34761apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>527
                     /note="ultra-conserved element locus uce-6171"
BASE COUNT          193 a           92 c           97 g          145 t
ORIGIN      
        1 aaatagtatg ctcagctgta ccacttgagt tttaacaggt gttttttgat gagatactag
       61 gtttttcaga aagttatagg tatacttaac taagtcatca ttgattgctg ttaaggtgta
      121 gctaaaaata tttaacttct tcgtaaccta tcaaggagaa acactgatct aatttgtgca
      181 caacacagcg tatcgtggac atttaatgaa cagtgcactt gacagcttta ataaaacata
      241 gcatttgcca gcagagataa ttagaattga agcagcaaaa ttctagtgtt tggcaacaca
      301 gatgaaacaa cttcattaaa atgtacagcc tcagcgaatg aaaggcagga aagcactgga
      361 ccctgaagaa tcagccttct caaaactaat tgcttcaatg cttaaaaagg acagctatga
      421 aatatcaagg gcataacaag gaaatactag tataaaaaaa agaaccactg aggataaatc
      481 aggcttttca aatacgactg caccgtattt aggccgctaa acttttc
//
LOCUS       KCKM01002212             907 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34775apa ultra-conserved element locus
            uce-5657, sequence.
ACCESSION   KCKM01002212
VERSION     KCKM01002212.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 907)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 907)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..907
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34775apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>907
                     /note="ultra-conserved element locus uce-5657"
BASE COUNT          249 a          208 c          206 g          244 t
ORIGIN      
        1 aacagagtcc ataaggaacg ttttaatacc cccaggcact ctggagagct cgctggacat
       61 ctgaacctct tgccctcccc tcttccctct tagagctgcc tcctcccagc agtctcgatg
      121 gtacccccag acattccctt tctcggtgac agcttttgcg atgagtcttg ctgtctttgc
      181 ggggactgtc ctgacacttg ggaagctggc agcagcctcc cacaacatga cagcaacaaa
      241 ggcagtgctc agtggcagca ctattttact tttatctttc atcccagcac cagatctgtc
      301 agcagggatg atggagcagt ggcttaagct tgctcatatc cctccacctc ttcttgtctc
      361 cagtcactgt ggctaaagga gcagcaccct ttaaatgaaa acctcacggc aaagagctgc
      421 tgacactttt tcactataaa gatacatagg gtggctggta gctaatgaat gtcagtgctc
      481 aaaaggataa tctctgcttt tctctgatac aatttaacag tgtatttccc taatttgagg
      541 ctgatttagt cgctggggta tttggatgcc tcttctatgg tgccgatagt taattaaaca
      601 gatgttgcag agggaatcat taattttagt gctgcagatg ggagcggaat gactttgtga
      661 agttaatgtt tcagcaaaac aataggcttc tgtcatcagt tggtataaac caagtaaatt
      721 aagagaacga gtagagtaaa ggagatagct tcgaaagaat attaattatt cattttagaa
      781 tcatactttt cccccccata aatcatcgtg cgaggagagg aagggaaaaa aaccttgcaa
      841 aagctgggaa gaggagaagt ggagcaatcc ccaagttagc agcctgaaag agagctgcac
      901 gctgctc
//
LOCUS       KCKM01002213             781 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34790apa ultra-conserved element locus
            uce-4361, sequence.
ACCESSION   KCKM01002213
VERSION     KCKM01002213.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 781)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 781)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..781
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34790apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>781
                     /note="ultra-conserved element locus uce-4361"
BASE COUNT          234 a          165 c          148 g          234 t
ORIGIN      
        1 attttgttaa tccagggggt tattactctg gtcccttatt aggatctata ctgctgccaa
       61 gcaatcctat aaccttctca aaagaagttt acctccgtgt tataaaacca gtagtggtat
      121 ttatactgtg caataattag tgtattactt gaatccacta acaggttcat tttatctccg
      181 cacaaaaccc ctagtctgct tatagaaagc ttgtgcctcc tttggtgctg ttaaagtggt
      241 gaaagagtga atgaaggctg gtagcacttt ctcctttcgc cgtgccttaa ttcccatctc
      301 tttttgctct catccaatta gtgcagtgta ttaagcggtt tatcatctca tagtcagcta
      361 ttgagagaaa caaggcgaac actttgcaat agagcctgct ctcctttgac accctcaggt
      421 acttacatat tccactgtgc tatgaataat agaggaagaa tagagcgcta attccctcat
      481 caaagaatgc cttgtctgct gctttgctca acaacaccat tctgatcaaa agaaaagcaa
      541 taaagcttag cataacaaaa cgaaacctac ttattagctt agtggttaaa ttaatgcaga
      601 gccgctgcta ttcaaaacca aggtttgaaa acagcctcca acaacctgat aatgctgcct
      661 tcgggatgaa ggaattttaa tctgaaattt gaagctggca cagatgagtt aatctattaa
      721 actgctataa ggagggtgcg ggagaactat tcaattaagg cacatttaag gtgctccgca
      781 g
//
LOCUS       KCKM01002214             647 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34805apa ultra-conserved element locus
            uce-1083, sequence.
ACCESSION   KCKM01002214
VERSION     KCKM01002214.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 647)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 647)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..647
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34805apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>647
                     /note="ultra-conserved element locus uce-1083"
BASE COUNT          220 a           83 c          102 g          242 t
ORIGIN      
        1 ttaatgctga caatatatta aatgaagaaa ttaaatgaaa caattctggg agggtatata
       61 taatgataag aaagtaaact agcagtggtt acattttcta tggtagacat aattgatatg
      121 tttgttgtct gtgattcaca cattatttta agtttctgag ggggattttt attgcaaaat
      181 attctgcatt ttaaatacta tttaattatg gtttgtttcc ttagggatta tatcaccatg
      241 tgattttaat ttggtatata ccctaagggg cagcatattt tcaattatga aatatttcct
      301 ccagaaacaa taatggttca atgatttatt gcaggatcct attataaggt gcctcataca
      361 agcaaaatct gaaatgcaat tggcttaaca atatagtata ggcaggacta aaatgcatgt
      421 gaactgagca tatgggcctt tttcacaaaa atcatattta tatactttca tcctttgcat
      481 aatacttcaa ttattatatc ttgaaaaaag aacttggaaa gctgagagct atgaaacatt
      541 tacattatta tctcttcaaa aagttcattt ttggacaagt atcatttgga tagggattaa
      601 cttaatcaga gattttgaat cttctttact ttaattttta atctctt
//
LOCUS       KCKM01002215             835 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34820apa ultra-conserved element locus
            uce-4674, sequence.
ACCESSION   KCKM01002215
VERSION     KCKM01002215.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 835)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 835)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..835
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34820apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>835
                     /note="ultra-conserved element locus uce-4674"
BASE COUNT          229 a          226 c          148 g          232 t
ORIGIN      
        1 tgaatagatc agatgccttc gtctcccgat gatgggcacg agcacatctg gagcagcgct
       61 gtgacttctt ctcaccacca tttgctaatg atggcccagg ttttaccccg cagaagtgct
      121 gtccaagccc cactgccttc ccctctcttt tctcttgcca accccaacaa aattcctctc
      181 attttgggaa aaaagtcact ggcaggaggc tgggaggtgg tggctcaggc gatctctccc
      241 cctcctctcc accatccacc gttcccacta gagatctggc catctcgcat tcacaacgtg
      301 tccagcaaag tttgtgtcaa ggggtttaaa ctttagattt gtgtgaccaa ggaattccca
      361 attctgttgc atgtgttccc ctgtctctcc ctctcctccc tgtctttctc ttggctgtga
      421 aacagcacaa ggagactctt tgtatgctcc taatcctgaa gcaacacagc tttagcaaca
      481 tccagggata aaagcaccat caaaccacaa ctttatgggg gcaaatctcc tctaatccct
      541 cgctttagct aaacaaagct tcttgcccta atccgctatc gctttaaaaa aaaaaaaagc
      601 tcagattttg tttttagtaa gaagatgatc caaaggacta attttaagag agactaacca
      661 actctgacag cttttaaaat agacgacaag aaaatagatg caaacttccc tctcaattca
      721 agggttttca ggctatgcaa taagaaaaat atccagggtt taactgcttt cctttaagct
      781 cactcttatt gtattaaatg ctctgaccaa ctcagattca aatcaccaat gccat
//
LOCUS       KCKM01002216            1071 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34836apa ultra-conserved element locus
            uce-1427, sequence.
ACCESSION   KCKM01002216
VERSION     KCKM01002216.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1071)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1071)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1071
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34836apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1071
                     /note="ultra-conserved element locus uce-1427"
BASE COUNT          330 a          175 c          168 g          398 t
ORIGIN      
        1 ccatattgca actcattctg acagtgaaac tgtagaattc ctctgattta agtaccatct
       61 ggttatgctc agagctttaa agctattatc tcagcataaa atttcagcat cctatacttt
      121 tttcttcgcc aaactatcca tttttaagcc acaaatattt ttccactcct ttcagatttt
      181 atctaaaagt atattttaac agtatttaaa tagttcttaa acaataacaa tttatcttga
      241 tagatgacat gctgtgtttt ttcattttat tttaattagc cattgtggaa ccaaattccc
      301 ttttgtttta ttcctttgaa tactgtttaa ttatagttat catgccaaat atcttaaagg
      361 ttgttttacc aatacagttt catttaacat aagccatgtg gaatcaatag tcctgtttcc
      421 taaagtgaat gcttggaaaa tcttacattc atatgttaag agtacacatc ctttcctcat
      481 tagttggaaa gtacagggat tttggcacag gttctgtgtg gaagcattgt gcagctttta
      541 tatgggtttt gtttttagcc tttgatgaca ctgtttagaa taggaagtat ctaataagta
      601 aagcattttg tctaatgtgc tgccagtgtg tttaatatat gcctggaggt ctgaaacatt
      661 atcttctcca ctacagtaat atgcatttaa ttctctgaaa gcagaaggtc gaacttttaa
      721 aagggactca aagtacattt tcaactaaaa taatttaaaa cacatgggat aggggaccag
      781 agtaatgtac ggttggtttt tatggtttaa tcatgatcat gttaatgcac accagtagct
      841 aattaaagaa aacttttatt gttcatttta aatgggttat gtaaagagta agagtattga
      901 tataatacag cccaatgata aatggtaccg ttatgtttgc taacagcaag ctcatattgc
      961 tgttcttgac atatttaaag tattggccca tttattccat aataaagcaa agaatctttt
     1021 tagacttgtt ttacagagag tcattccctc tcatctcctt atcccattag a
//
LOCUS       KCKM01002217             861 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34851apa ultra-conserved element locus
            uce-3462, sequence.
ACCESSION   KCKM01002217
VERSION     KCKM01002217.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 861)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 861)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..861
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34851apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>861
                     /note="ultra-conserved element locus uce-3462"
BASE COUNT          259 a          167 c          122 g          313 t
ORIGIN      
        1 ctgaaatatt tagaatgggt tttagctaat tttccatctc cttctgttat aacctttttt
       61 tttttcttat cagcaagttt gatttctttg tcactatcat acatcacctg atccatttcc
      121 ctaggagcat ttctccactt ttagtatcaa aacactgtag aggttccttt gtaaatgaat
      181 gatacgcatt taaaatacct ttgtaataat aaatatcaca tgaacatatg tatcaagcaa
      241 aggatttcaa ttttgatgac acttgcttcc caagaacaga cattctggag gatgttgcca
      301 gccccaaatt gattgacatt tgtttactta actctctctt cttgaaagtc tgcacaccta
      361 tttcaacctt gaacagtttc caactgtggt atactggaac attttttcat ttattaagtt
      421 cagtgttgcc aacccaaaca aagagtaatc agtgatgatc caagcagacc aagctgtcta
      481 gcaccataca atgtatctgc atgctaattt tcaaattccc tcacatttcc agagaactaa
      541 tgggatcatt ttcattctgt tacagcaact caacagttac tgaatcacca tctgtgtttt
      601 cgttaacctg aatcagatat gaattctgtt attgcaaggt agagcagctt gtttaatgat
      661 tcttaatctt ttctttaatt aaatcatgca gccaacctga aaaatctatc ttaatgcaaa
      721 ttaggagctt ttttggcatt cgcttacagt aatgcactaa taaggttaat ttatgaaggt
      781 tctcttccag tctgtacaga tgatatttgt tcgctgcata tttttagcat attgtccctt
      841 tttaaaaaaa taataattaa a
//
LOCUS       KCKM01002218            1063 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34866apa ultra-conserved element locus
            uce-131, sequence.
ACCESSION   KCKM01002218
VERSION     KCKM01002218.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1063)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1063)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1063
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34866apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1063
                     /note="ultra-conserved element locus uce-131"
BASE COUNT          333 a          190 c          231 g          309 t
ORIGIN      
        1 ttggtttctt gcaatggtgc ctggtttgcc agggagccca gcactcagca actcagcagt
       61 tctgactcca cactatccct gacccagcca ttggagcttc cttggcatgg gctatgagct
      121 atttctataa ctggctgcaa tcttcattga gtaaacaagg cagataccct ttttaatgaa
      181 tgaaacacgt tccgttttat tatagcggct caggaaaaaa atgggggtgg agagagttct
      241 aataattcag gtatgattaa aaagaggata tttactggct tgtaggcctt ggggagaaaa
      301 aaacaacacg gcggcacagt ttctatatac atccctgggg aaaagttcaa gaaataagaa
      361 aatgcatata accattgttc gtgtgcatta tgcaagcttt aaaaaaaata gatagggctg
      421 agtttcagag tatcaggaaa agtatttggg ctgcatttaa gtgagaagga ttagcttgca
      481 tgatgttgat ttataaatgg caacaaccaa tcccttatat tctctcctgc agtcatctct
      541 cctgcacagt aattcccaat gttccctttt gaaagccctt gatactcagt tagccccgag
      601 gtataatgtt tgataatata actactgctt ctgtcactgc gttttgtaca aacgcattat
      661 atgtggccca gaatggtaaa gatttatgta tgggtatgga aaataaaaat cagcattgat
      721 taaaagcccc agatagacca tccaatcccg cccagagaac atcagttatt ttgcattttg
      781 acgtggcgat tgataactca taaatgcaag caggaatgac aaatgcggat ggaaactggc
      841 tttgacaaaa acgataacag tatcagtctc gaggggcgat ggaggtataa gcaggagctg
      901 tttaaaatat ttaatcattt tatgaaggct gcaagatgtt gtttgaccct gaaggagtgt
      961 gaatgtcaca tggatcagaa attgccaagt ctttgaagtg aaataaaaaa aatggtgtta
     1021 ttatagatcc ttcttgacat cctatcattt ttgtatagga tta
//
LOCUS       KCKM01002219             955 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34881apa ultra-conserved element locus
            uce-726, sequence.
ACCESSION   KCKM01002219
VERSION     KCKM01002219.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 955)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 955)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..955
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34881apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>955
                     /note="ultra-conserved element locus uce-726"
BASE COUNT          282 a          252 c          206 g          215 t
ORIGIN      
        1 accgagaaga aaacactgta ctgatactcc ccaaaataac cacgaaaaca acatttggca
       61 ctttacctag accaaattag caaaatgttt ttgcaatacc agtggcttcg cagagacacc
      121 aggaaaaagc ggcgttaatc aatactgatg agtttgtcct tgacatagtg accgtgtcat
      181 cgggctattg tcatgtgata tcatgtcatt tccccacctg gctcatgacc ttgtccttta
      241 aatgacccaa agcttccctc aagtagcagg aggcccctcc ccgctgtctc agcaaggtcg
      301 aacgggtcag cgtgtcctca tctataatcc accaccattt gtcagcaggg aggctggagg
      361 aggcaggctt gctacaaggg gagaatgccc aattaggcag ctgtcacaca aagcataggc
      421 tgcaaaatta tcccctgtca aaagaaagag cagctgcggg tgccaattac agcaaccttt
      481 caacccttta ggtactggaa actacacaga agtaaatgaa gtacaattag tgataacaaa
      541 tcgatgaatt aggacactaa attagaaatt actagcaggt gagcttaggt ctcccataat
      601 attaagggca tggcacaccc caggcaaggg caggaatgcg cggatcgcac agagcacgtc
      661 gctttcgtcc tatccagctt tctcgcgtgg agcatgtttt cctccatcat tttctcctca
      721 caagccttgt ccgagccaga cagtacaggg agaggaggaa aaaaagaagc aacccgaaga
      781 agaaagaagt tgtagcacct gaagttccct ccttatcctg gcgaatgcag tttcctccct
      841 cctcacaagg aggtcctcag agccagcaca atctctcccc agcaagtata ctccatttca
      901 gcccaacagc tgacatttgc tgcaactcgt gttccagctg cacaagagtt actcc
//
LOCUS       KCKM01002220             537 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34897apa ultra-conserved element locus
            uce-4442, sequence.
ACCESSION   KCKM01002220
VERSION     KCKM01002220.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 537)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 537)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34897apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>537
                     /note="ultra-conserved element locus uce-4442"
BASE COUNT          203 a          106 c          107 g          121 t
ORIGIN      
        1 aaaaaagaaa aaaaaagaaa aaaccactta gcaaaccaca aatttcagag acctagtcac
       61 atctgtgttt tatcagcttt ttccggatag tattacacca aacaattgtc tgcagatcgg
      121 tagacagctg agactttaaa gtgctgaatt actgagaaaa tgctagagat aaaaaacagc
      181 acatgtatcc tatcaatgta atgaaaccaa cctgctgcta gcgccatagt gccttagttc
      241 taagtaccct gtagaggaac ggaaggcttt catttaactc ttaagaggaa agcaaggcaa
      301 agaagagtaa aggtcatcta ataccagcct taatcacaga cctgaaatac tctcagatat
      361 atgaagggag gaatgttcgg tgttcaaaat aaaacaccaa ctgcagacaa caagagtgtg
      421 tctgatcata ccgggggtag catttcctgt tggaaattcc caagactgcg gctcatgtca
      481 agtgaagtta cagacacaga gcatggcaaa agctgaaact aaaaaaacag gctacac
//
LOCUS       KCKM01002221             218 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34911apa ultra-conserved element locus
            uce-2728, sequence.
ACCESSION   KCKM01002221
VERSION     KCKM01002221.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 218)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 218)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34911apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>218
                     /note="ultra-conserved element locus uce-2728"
BASE COUNT           33 a           50 c           75 g           60 t
ORIGIN      
        1 ggcggggcgt gcgggtgcgg gtggtgcggg tggtagctgg cggagctgcc ggcgctgccg
       61 ctgtgttgcg tgtactcctc gcagggaggg aatttgggct cgatgtagtt ggagtttatc
      121 aaaaacgaac tcatggtcat taatttgtga agtgcaaaaa tactaatttt tctcgcgttg
      181 tcgtttttct gggctcggcg aggcccctcc ccttcccc
//
LOCUS       KCKM01002222             812 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34927apa ultra-conserved element locus
            uce-4853, sequence.
ACCESSION   KCKM01002222
VERSION     KCKM01002222.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 812)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 812)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..812
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34927apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>812
                     /note="ultra-conserved element locus uce-4853"
BASE COUNT          249 a          165 c          160 g          238 t
ORIGIN      
        1 aagtgcacca caattgtcag ctagtgacag gctcagggga ggccaggact aagtaaacat
       61 ggaggataaa ttatacaaga agagcacagt ttggaggaaa acagggccct ctttatacaa
      121 cacactcgtc cttaaaatct ggagtaagat cctatcattg atgaaaatcc aaaacctcat
      181 gttcttaaag ggaagagtga gaggaaaagc agtcactctc ctttgacggt ttgaaaaaag
      241 aaaagatgtt tgtaccactc actgactggc taatgaataa tcagatttca cagcttgagt
      301 gctggggtgg taatttggtt gcacgccatg ctccaaatcc atggaatagt gcttcattaa
      361 tgtgaagacc tgtataatca aacaattagc agtctctctg ctgctaaagc agcttttcat
      421 cagcatatat acttcgttgt aagatgagtc tcaaattact ggatctgaca gcaactagtc
      481 ttttactaaa tcacagcagc agtaaagcag ggtggacgga acattcattt tttaacctat
      541 ttctgcatct gcaagaggtt ccctttatcc atgccacgtg ccctatgtaa ctactaatgg
      601 gaaagtgaag acattatagg tgaactgaag tttcatttaa atgagtaaat cacatttttt
      661 aacattatgc ttagatgcca taaattagcc gtgatatgtt gctacttctc acttcaccta
      721 cttcttactt cacttatctt ccaggaagga tgaagagact tctacttgca ttctggtact
      781 ggaatgtctc cctcttctct tccttctaca gg
//
LOCUS       KCKM01002223            1161 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34943apa ultra-conserved element locus
            uce-3535, sequence.
ACCESSION   KCKM01002223
VERSION     KCKM01002223.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1161)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1161)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1161
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34943apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1161
                     /note="ultra-conserved element locus uce-3535"
BASE COUNT          390 a          226 c          250 g          295 t
ORIGIN      
        1 taaaaaaata aagatccctc cctttggtat acctttcata tagaaggggt gcaaaatctg
       61 ttcaaaactg atcatgattt attttgaaag actcctccaa catcaaatga ggtcatcagg
      121 taaaaggccc aggagtacac ttaaaacaag ctgtcataaa cctctgtgat ttagcaacct
      181 ggctgtcctt gcctggtcca tcacctgcct gctccagagg gatggcacgg taccttccat
      241 ctttctcaaa ctgacatgac ccatcaaagt gacagggagg agaaagggct gttatttgtt
      301 ccccagctgg cgacagtaat tctgtttatg aactaggtac ttcattgcca aacaatctgg
      361 aagaccatga taatgcctga cttgctgcgc ctcacagaaa aaggcaggca gggaaacatg
      421 cactctcatt ttctgaaatt ctatcttgtt ctaattttac aaggaattaa agcatttcaa
      481 gtggtggaag ttagagaaca gaaaataacc gttgttgtgt tgcacagcat accattcaca
      541 gctagcgtga aagaccttcc gtttcaagcc tttgcccttt accttgatgt ggccaatgct
      601 ttctagtgga ggttttggaa ggagaagaaa tatcacagca tttctttctt tgttgagaat
      661 gaagaagtga tgaggaagga ggagtggaaa gaagtgagga agggggagga gaaaagataa
      721 aagataacag gtgtgagaca tgagacacga accgcagaga ttgaagggta ttaacagatg
      781 agcacagaaa acggaatttc gaatttcatt atgcaactgc tgctcatgct acaggttaaa
      841 gagactgatg agttagttat gtgcaatgaa gcaacagctc tgaaatccgg cgtcatactt
      901 accaactaag cattacaaga aaaaaaggaa gagagagaga aagaaaagaa ttctataaca
      961 ttatccagat ccagcaacct tattcattgc aattgagata catcctaaac actgtctgaa
     1021 atgctcgctt aaagtctgtg aaaacagtta aatactcaca cacatacaca caatttagaa
     1081 ggaaaaacaa atggcagctt gatatatggc ttctgctccc cagctgtttc acagtattaa
     1141 gcgtgctaaa attacagcca g
//
LOCUS       KCKM01002224             681 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34958apa ultra-conserved element locus
            uce-4912, sequence.
ACCESSION   KCKM01002224
VERSION     KCKM01002224.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 681)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 681)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34958apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>681
                     /note="ultra-conserved element locus uce-4912"
BASE COUNT          213 a          125 c          115 g          228 t
ORIGIN      
        1 tactgtctga cctaaaggga tgtttataaa gctttgcaaa cagtaacttt gtacgttact
       61 acagagaact atggataaat acataaggaa gaacacacgt gatgagctat ggtatgaaac
      121 actctagctt ttgtttaagt tgagttttaa cgtcttaaaa agacatttat gctgtggtat
      181 gtttcctgga ctgaatatct atgttatata aaggccattg aagcactccc ttcccccttc
      241 tgtttatagc ctttttagtt tagaacagtt gtcatccttc tgaaagtgaa acaccacttc
      301 tgatattttt ccttttctat atctgcatca atcaaagaaa gaagaaatca atgatatttt
      361 atcaagcata aaatgctgtt ttaacaaaac aggggttttg ctgaagaaat gtttcagtaa
      421 ggaaggaaat accatggact ttattacagc tgcctaatgt tttccacgaa ctgcagaaaa
      481 taattcattg tatcttagtg acctacaata acagctgact gcttgcactt gatggaaatg
      541 tggtttgtgc ctactaaaaa ttaactattt aacttctcca tattcttttg tatggtaaca
      601 cattgtgttc tgttctgaac tgcttcccaa gatgtgaacc ccagacacaa acaccaattg
      661 ctctgcgatg ttcttccata a
//
LOCUS       KCKM01002225            1241 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34974apa ultra-conserved element locus
            uce-1309, sequence.
ACCESSION   KCKM01002225
VERSION     KCKM01002225.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1241)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1241)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1241
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34974apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1241
                     /note="ultra-conserved element locus uce-1309"
BASE COUNT          366 a          304 c          258 g          313 t
ORIGIN      
        1 aaaaacacct gaaaaaagag gaaaaaatct catctgctct ttcagtgttg ggcaaagttg
       61 taggggaagc gcacgtggac cctactcagc tgcaggcact tcaaaatgca attgctggtg
      121 acccagcttc atttataggt gggcagttct tgccgtactt tattcctggg ttcgcttcgt
      181 attttacacc tcaacttcct ggaacagtgc aaggagggta cctcccccca gtctgtggaa
      241 tggagagcct tttcccctac gggccagcag tgcctcagac aattgctggc ttgtcacccg
      301 gtgcactgtt gcagcagtac caacagtatc agcagaacct ccaggattcg ttacaaaagc
      361 aacagaaaca gcagcaagaa cagcagcaga aacaagttca agcaaagtca tctaaagcag
      421 agaatgagca acagcaaaat gccagtgaca cttcggaaac aaaagaagac agaagttctg
      481 ctacagaaag cacaaaagaa gaaccccagt tagattcaaa aagtgcagac ttttcagaca
      541 cttacattgt tccattcgtc aagtatgagt ttatatgcag aaagtgccag atgatgttta
      601 ctgatgaaga tgcagcagta aatcatcaaa agtccttctg ttacttcggt cagcctttga
      661 ttgacccaca agagacagtg cttcgtgtcc cagtcagcaa atatcagtgt cttgcctgtg
      721 atgtggctat cagtggaaat gaagcactta gccaacacct ccagtcaagc ttgcacaaag
      781 agaaaacaat caaacaagca atgagaaatg ccaaagagca tgttagatta ttacctcact
      841 cagtctgctc ccctaatcct aacaccacat ctacctcgca gtctgcagct tcttctaata
      901 acacctatcc tcatctttct tgcttctcca tgaagtcctg gcctaatatt cttttccaag
      961 cgtctgccag gaaagctgct tcttcccctt cttctcctcc ttccctttcc ttgccttcaa
     1021 cggttacctc aagtttgtgc agcacctcag gggttcaaac ctcactaccc acagaaagtt
     1081 gttcagatga gtctgacagt gagttgagcc agaagctgga agacttagat aattctttgg
     1141 aagtgaaggc taagcctgct tctggcctag atggtaattt caatagcatc agaatggata
     1201 tgttcagtgt gtaggagtga agacaggatc ccttgcttaa a
//
LOCUS       KCKM01002226             710 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 34990apa ultra-conserved element locus
            uce-2666, sequence.
ACCESSION   KCKM01002226
VERSION     KCKM01002226.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 710)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 710)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..710
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34990apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>710
                     /note="ultra-conserved element locus uce-2666"
BASE COUNT          182 a          146 c          190 g          192 t
ORIGIN      
        1 ggatggcagc cccgcgctgg ggagagcaat gggaaagaca tgtggccgta gggagccgcg
       61 tggaccggaa gacagccaga cctggcatgg ctcagcagcc ttgtccccaa ggctggcaca
      121 gcagttaaca tgtttcacgg tgacctggga agcagctaga gtgcagggga tggagataaa
      181 gtacctttgc ttacttggtg gtcagagtgc cgattggaaa tgccttttct gacagtatgt
      241 tcatcatatt ttgagcttcc tagatgaagt gacattgctt atctcctcga aggcaaaagc
      301 attaaacctg tttcttcttt gctcttcagg agaaaagctg cccttacatt cctccgaaga
      361 agctcaaaat ctgatgggcc aatcatcagg taaaacacaa agctacaggg aaataagcag
      421 gcttctgttg aaatacattt cttgcgtagg actgtgacgt tgttgtgctg ctagataaat
      481 tgtggtattt gcagagaagg cagcaggttt tcttggtggg cagagggaga tgggcagcac
      541 tgtggctgcc attctccttt gtacagcatg tcaaagaaaa gtgcctggat tttattgcgt
      601 aggtttttgc tgtttgcatg taactgccat ctgtgcaaca gaaagacatc agagtcatcg
      661 ctcttattct tgcatttaat tttgcatcaa ctttgctcag aaacagtagg
//
LOCUS       KCKM01002227             386 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35005apa ultra-conserved element locus
            uce-5693, sequence.
ACCESSION   KCKM01002227
VERSION     KCKM01002227.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 386)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 386)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35005apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>386
                     /note="ultra-conserved element locus uce-5693"
BASE COUNT          116 a           70 c          100 g          100 t
ORIGIN      
        1 ctgtgtgcag tggggaggga tgtccatgtt gtttgcactg ctaaaaccca ggtttctgtt
       61 ggacatcagg acttcttccc tcggcaaatt aatggtgacc aatggctgaa ccagcactgt
      121 ggacataaat catgggaagg agcagcgaga aatgagtaca aggcttttct ttctatttag
      181 taatttatca agggaagtgg cacattaata aacagatctc ccttgaggtg tgggaataac
      241 agagataaat atgactgtca aatctggcct gcttccttct gttagagaag gaggagactg
      301 tgggaatgca aatgcaaaaa actgtatctg gaaagacgcc tattatttgt aggacagaaa
      361 cacaactcgg ctgagatgga gcctca
//
LOCUS       KCKM01002228             634 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35019apa ultra-conserved element locus
            uce-5671, sequence.
ACCESSION   KCKM01002228
VERSION     KCKM01002228.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 634)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 634)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35019apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>634
                     /note="ultra-conserved element locus uce-5671"
BASE COUNT          196 a          110 c          118 g          210 t
ORIGIN      
        1 tgaaatcctt actgctttcc agattttttt tccccagcta gatttctccc ttcctcattt
       61 tattttatgc agaactgata tcagaacgtg tggctctttc atttgaattt aattcagctc
      121 tttctagtca tcttgccggt tatgttatag ataacattat atattgtggg tgcagaaact
      181 atatgcgagg tgcaggcacc aagaagacgt tatctgatgc cagtgtgtca ggaagagtta
      241 aatctttttg acaattcaat ggttcccttt gggtttgcac aaatggcacc tgttgttgaa
      301 gtcaatagag cttacaattt aatttcatct gcctgcaaac aatctctctc attagggggt
      361 gaaatgatga tagaattcac tgaggcatgc agtttcactt tctacagggc aatacgtaag
      421 tacagtcatc attttcagtg aagggaggca caattatctt ggaaactgat tgtaaagaag
      481 aagaaaggaa aaaatatctg ggaaaaacat cataaaaagt cagtcactac attttttcgc
      541 tgacgccaat ttgcaatcta attattatgt ttaacacaat ttgaaaatgt ggtagtcaga
      601 aaaaaagaga ctagtaatat acttttccat ctat
//
LOCUS       KCKM01002229             403 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35035apa ultra-conserved element locus
            uce-4402, sequence.
ACCESSION   KCKM01002229
VERSION     KCKM01002229.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 403)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 403)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35035apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>403
                     /note="ultra-conserved element locus uce-4402"
BASE COUNT          158 a           65 c           62 g          118 t
ORIGIN      
        1 taaaataaaa agttcacctt ttcagagtgt gctacacgaa gctttgcttg ccttttatat
       61 agtaaagtaa ttttatagta ttgtgtcaca atgaaggaca aagataagcc aactgtttag
      121 attcctctcc tttatgttgt ggctttgatc actaacaatg ctgcgtgaac agccaacaga
      181 aggctgacat ttcataaaat atgcagtgat aaaaactaat actgtagcat ctgggagaga
      241 tatataaaat gcagaaatac acctaataac tgtgatctta aattacaagt tactaaaagc
      301 taaataagcc acatacctac aagaaaaaga aaaattaaga caggactttt gtgcttctac
      361 tcctaaaaac aaatttaaaa aaattaattg aagatatgct atc
//
LOCUS       KCKM01002230             559 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35049apa ultra-conserved element locus
            uce-7907, sequence.
ACCESSION   KCKM01002230
VERSION     KCKM01002230.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 559)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 559)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35049apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>559
                     /note="ultra-conserved element locus uce-7907"
BASE COUNT          150 a          106 c          122 g          181 t
ORIGIN      
        1 tttttttttt tttttttttt gcagtcttag cataaaatgg tcaaatgatg ttccaccgca
       61 gaattcaatt tcacagttca gttgggtcct tgattacact gccaaattca gattaatgtg
      121 catttaacta acatggatca gggactcctg gccggcagcc agctgtaata gtagcaaccg
      181 tgagctgtgt agagtttgct gctctgtcca cccctgtgca ctgccaccga aattgattga
      241 ttaaatgaac tcattgccat aattatttgt aattgtgcta catcataagc ctgtgtcaaa
      301 ccacccccct gccctgagat gctctgcacg tcatcaggag tcacatgtgt tgtgttgtaa
      361 atgtggagat aaaaaggcat ttttgtttca gctgggggga tttgtcttag attcttttct
      421 ttttggatag aagcaaactg ttatgtttgc gcatgtgaag ggctcatttg ctttcagtgt
      481 aagaagctta gaagagcttg gaaaataaaa agaaagagag gaacctgcaa atgaacaagg
      541 cctcccattg ggataattt
//
LOCUS       KCKM01002231             976 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35065apa ultra-conserved element locus
            uce-1863, sequence.
ACCESSION   KCKM01002231
VERSION     KCKM01002231.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 976)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 976)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..976
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35065apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>976
                     /note="ultra-conserved element locus uce-1863"
BASE COUNT          337 a          198 c          177 g          264 t
ORIGIN      
        1 aaaaaagctt agttttatga gatgttactc cctggtatat gacatatgat tgtaaaaaaa
       61 aggcagtatt caaaagacgt cgaagatcat attagaaata aacggcactt ggggaaaata
      121 aaaacatgca cagtaaaaag aaaaaaaaac tcctgcagga gattcttttt cccataaatg
      181 aaacgagaat taggtttcca gtttccatac ttttcctaag aaaatccagc tagtgtttat
      241 ttaaatagct ataattgacc attctcggga aatattaagt cacggttata tcacactatt
      301 tctgtttctg cgcaaaaggt tcagggcttt tataccagaa atggaacaca acactacctt
      361 cggggatttt aataaatgta gggaagactg ctagcaaaag agttgctgtc caaatagact
      421 gacatacaca ggccaatgta gcctctaatg acagagtaag ataatgacag gccccactca
      481 aaatcagcag gaagaggaag atcaatcttg gcagagtgaa ggaaaaatgc tggctttctt
      541 catgttagct catctcatac atatctatct tcagctgctg cccagtactg tggtgctctg
      601 cattaactac acagtggatc aataacaatt acaccttctc aaaaacatga cacatagcag
      661 gattgggttg acatttcact taggccaaca ttgatctcag tgcatctgat tccagtccta
      721 aattcaagtc aggcctgggt ctagctggaa taaacacaca gttaaaaaca aaaaaggaaa
      781 ccagctgctt gtgccttggc tcagaagtaa acagcacatc catctgtgca tcccccatct
      841 ccaatccact gttcttcctg ttgctactag tgattctaaa gttgatcaaa gactactttt
      901 tatatgaatt actcaccgtg acatcaatgt tgataatatc tccatcctga agaggtcgac
      961 tgaaacataa acagaa
//
LOCUS       KCKM01002232            1012 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35079apa ultra-conserved element locus
            uce-7511, sequence.
ACCESSION   KCKM01002232
VERSION     KCKM01002232.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1012)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1012)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35079apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1012
                     /note="ultra-conserved element locus uce-7511"
BASE COUNT          351 a          209 c          196 g          256 t
ORIGIN      
        1 aaaaataata aaaaattgtt tatataaact ctatagggca cttttttcct gcactgctgc
       61 agagctatca gcccacgaga agaagcacaa gttaaactag tcaaaactgc agaatgtttt
      121 cagaattaga ggtgcctgat gaagagaccg ttctttgaaa tggtgccttc tccagagatg
      181 gaaacacaaa ggaagctgaa gactcgtggt aggaagacaa acacagtcca ggtacacagg
      241 cagaaaaagt ggtgaagcaa caacggatgg ctcctctgct gtatcgattt ttctggtatc
      301 tttaccaaga ggcaatacag gaataaagca gaaacatttc agaccacaaa aaagctgctt
      361 atatcccaca agcaagaaag aaatccactc cttacatcaa actaacctca cattctgggc
      421 aaaaccaatc cccctctggt tcggctgtca gtttcagaca cttagcatga taaacccgag
      481 gacagagttc gcagcagagg acttggcctt cccgatgaca aacccagcaa tagaaatcat
      541 tccgtccatc ctgtggtaca acatcaacag ggtctgtggt gagtggctgc ttcatatagt
      601 aaaacggacc atgtcttagt tctgactgaa atgtaggcaa gaaaaacagg tttggtttca
      661 aaacaaattt gcattttttc aaataataat attcataata cataagcaag cagcagttta
      721 cagagttgat taacatctat gcaagcacag tatcttattc atagcacaaa atcattcata
      781 aagtagttca cttcttattc agatgtcaaa tgccagtttg tactcaagat ggaaaataaa
      841 cttttgtggc aagttaggac actgagtgta aggcatgcaa tccaacaaaa gtcatcaaca
      901 cttctatctt caagaaagaa gtattgctag agaagccatt aggccctcta aattcagaat
      961 tccacgagtc tctgcaggct aaatactgag atatttagtg gtggctaaac ct
//
LOCUS       KCKM01002233             377 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35095apa ultra-conserved element locus
            uce-242, sequence.
ACCESSION   KCKM01002233
VERSION     KCKM01002233.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 377)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 377)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35095apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>377
                     /note="ultra-conserved element locus uce-242"
BASE COUNT          123 a           57 c           64 g          133 t
ORIGIN      
        1 gagagagaca gacaacttat ttaaatcctg aatacagtca gacctcatat gcattgttaa
       61 aaaaaagccc taaagaattg catatggatt agggggatga atattctatt atttcagtct
      121 gttctgctga tcttcttatt gtgactttgc gcttcagaaa tctgccagga atttggcttt
      181 gctgtactag gcagtaattt taaatgtgta tcaagcactt gatagtgtat gatttgcgtg
      241 ctgttgcatt cccattccct aaattttcca ccaatttatt acttttttca tactgtttta
      301 atatttcagg atgatgaata tatacagcat cattaaaggt aaataaaaaa tgcatgaaat
      361 taaaaaatgg aatatta
//
LOCUS       KCKM01002234            1069 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35110apa ultra-conserved element locus
            uce-6438, sequence.
ACCESSION   KCKM01002234
VERSION     KCKM01002234.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1069)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1069)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1069
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35110apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1069
                     /note="ultra-conserved element locus uce-6438"
BASE COUNT          226 a          248 c          276 g          319 t
ORIGIN      
        1 gttttacttt attgtttggt tacatgttga tctgatactg ttatttcctc atgtttcaga
       61 gaggtctgaa cgctttacac tgaaacaccc tggcatttgt ctgctgattc aaaggacctg
      121 ccagctgcag gcaggactct ccttctgctt ccgtggtagg aaaaccctcc tttccttctc
      181 tgcaaaagaa gaatggccac agatgggaag gctgaagttt agccttatac cctcagttgc
      241 ttctgccacg tgcaggacag tgtgaattta aggagtgata ccttccagcc tagattcctg
      301 ggctatttct tttcctacca gtgttgcaat ctttacacca tctgaaagaa gagttttatg
      361 tgcccaaagg ctgcccgcag aggttggcaa gggcagttgg ttaagcctgc acaaggtcac
      421 tcaggatgtc taataattgt cctaacactt tacctgttat ggaacaataa tgagagtttt
      481 tttcattatt ttcgggtgag tgaacctggc agatgctgac agccagcaga tgtgtaaagt
      541 tcgaggtgat ttgtaaggga ccggctcatc tgacgcacag taattgcatt gtgggacatt
      601 gtcactcagc gtcgtgtcct gctccggcag aacgaggtaa aggtcagttc aaagagctgc
      661 cgtagcgtga ggggcagctc ggggctgaaa ttaaaaacct catttctatc tctcccctag
      721 acgtgtgctc acggcctgcc ccagttctag atttagggat cgtttgggcg gctgagcggt
      781 tgttctcatc tggagtgggt ttaaatccct cctctcataa gtccttaccc acctgttggt
      841 gtggtagctc ggcgctcacc tgtctgctta taatttgggg ggcttggaag tttcttctgt
      901 gtcttgttcc tttgcttcag tgctctccct tcacgcccca cacacaggtg agtccaagtc
      961 ccgctgttcc tgtttgtggg tgttaggagc gatgtgaacc ttcgtgctgg aaatggagcg
     1021 ggtttgtctg acgtttgagc ccgttgacgg tcccaaatgg ggagcaaga
//
LOCUS       KCKM01002235             973 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35125apa ultra-conserved element locus
            uce-5476, sequence.
ACCESSION   KCKM01002235
VERSION     KCKM01002235.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 973)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 973)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..973
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35125apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>973
                     /note="ultra-conserved element locus uce-5476"
BASE COUNT          372 a          170 c          178 g          253 t
ORIGIN      
        1 gtcttagcat catggctgtc taaagaacat ccaaatcaaa aaattcatgt agaaaaatgt
       61 aaacggcaaa tcaaagtaaa attacgctct ttccttccct ccctcattta tcacaaatac
      121 tactgcttac caataaattg aaaaagcaag agatgtctaa ttttcacttt tatgatagta
      181 aacattggca cagcactaac ttctaacggt tccagaatga attgcgaaat agcatggtat
      241 attacataac tcaaaatatt cattcttaat ctcttcccct ctccccccat cccccaaagt
      301 acttttactt tgaaaaattt aatgatttag cagaatttga aagcagaagg tttaaaaaag
      361 tgataaaggg ggtgcagaaa ttagcagagg tggcactacc tgaaagctca tcagaaaggg
      421 gagtgagaac aatatcaggc aagaagggtt tggaagtatg gatcagaaca ggagcacttt
      481 tagcactgcg tatataggcc gatggcagag cacattcacc aatggatcgg cttctcatgg
      541 ctttaaaaag gaaaagaaag aagtggggaa ggaaaaaaga agagtgacta taatgaaagg
      601 cttgtgtcac agaaaaagca gcaacagaga aaacaaggat aaaaaggaag aaaattcaaa
      661 aatcaaaaca tttcagcacg gcagatattg gcagagctgt aagaaagaaa aaaaaatcag
      721 tggacacata agacattttg agtttttaac tgttatgtaa agcagcaaca atgccttttt
      781 taatgacgat tacagagatt ttgcattcaa aaatcaagaa actaattgac gcattgcatc
      841 aggggttgaa aaatcaaagt cactccacaa gcactcagaa attgaattta ttttatcaga
      901 aaaagcaact tacgctacat tctcattttt ctagtttcct ttggtttact cctgaaaaag
      961 catctctgaa ttt
//
LOCUS       KCKM01002236             465 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35139apa ultra-conserved element locus
            uce-1231, sequence.
ACCESSION   KCKM01002236
VERSION     KCKM01002236.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 465)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 465)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35139apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>465
                     /note="ultra-conserved element locus uce-1231"
BASE COUNT          122 a           86 c          113 g          144 t
ORIGIN      
        1 gggaagccag tctggattga ggcattcacc cctgaagcta aatctttcaa tcaccagaga
       61 aaattgtcat ttattaaata tttaacggat acgatggtgt ttggatgcca gtaatttctg
      121 ttcaatcttt tttttcttcc tttggtagag tcgttccact aaagaagacc cagagcaact
      181 gcggctaaag cagaaagcga aagaggtagg actttccagt taccatgctt gcctttgtgt
      241 gttgagagaa ggttggcagc cctgtcctgg caattaggtc agggtttatt ttgctgctgc
      301 ataccatttg cagaggcctt ggggaaggac aggaactgcc acaggcaagg gcagtgcttc
      361 aaatgaggtc aatgaattat gagtttttta acattttatt ttcgtagttt cagccctgtc
      421 tagaaatggt cctttgtaaa ctgcaggagt actctttgta ggaat
//
LOCUS       KCKM01002237             920 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35155apa ultra-conserved element locus
            uce-3323, sequence.
ACCESSION   KCKM01002237
VERSION     KCKM01002237.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 920)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 920)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..920
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35155apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>920
                     /note="ultra-conserved element locus uce-3323"
BASE COUNT          258 a          204 c          182 g          276 t
ORIGIN      
        1 gggaaatgtc tcgcttattt ctgaacgaca agcgggagct aatgaggctg ccgctgctgg
       61 gccagtaacg ggaagggaag tgtgagattg acaggatggg gagaggaatt tttttaagct
      121 cacagtttct aactaccata atccacgcta tctgggaaat acttgaatct ctctagatgt
      181 aggctgtcgt cctgaagcat ttaccttcca gacacctttc taaatttaat tctttttctt
      241 agcatctttc tctcctctcc gtaaaacggc tcttggattt atttctcttt atcgcgcatt
      301 tgcctccgaa aagccaccac tgggtaactg agacctgcta taccaaacca ctgctactgg
      361 agggacttcc ttgaacttga agaaaggcac atcaaaaacc accagtgtta ctgccatgtc
      421 aattttgatg ctaataatgt gcagattatg acgaaaattg ccaatcatgt tctctgatgg
      481 acctcctttg aatgtggaat tggaaaaaag ttccccgcac agagacctgc tgtcaagtac
      541 taacaacccg ctaagggaag tcattagaag agacagataa gagacttggt acataaaaca
      601 ttgttcttgg tgcatagaat gtatgttatt taatgttatc tctgttacct gaagtgattt
      661 cgcacaagaa agccactttc ttatcatctc aattgccaat tttcattttg gtaacttgga
      721 cgccccgggt agacttttct ctgttaagtt gatattccac caacgtgaag agcctcatta
      781 aatcaaaccc agatatttcc ataatgctcc ctacagagcc acttcactct tcacataatg
      841 agatttttct gaagagttga agccctcatc taacttgcga ttgcttgttt aggccctgtg
      901 tgaatgtgaa tacacacaca
//
LOCUS       KCKM01002238             906 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35171apa ultra-conserved element locus
            uce-2396, sequence.
ACCESSION   KCKM01002238
VERSION     KCKM01002238.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 906)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 906)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..906
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35171apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>906
                     /note="ultra-conserved element locus uce-2396"
BASE COUNT          285 a          172 c          138 g          311 t
ORIGIN      
        1 gaagagctcc cacaatagtg tttttaaatc cttgaatatg ggtcactggc caccaagttg
       61 catgcatttg tctaatatac atcacttttt ttcatctaca tttaccattt ttttcatcag
      121 agtgaaattc acccagtgtt ttgtgtttgc tataaataca catctcagct gtatttctat
      181 cctttgtgtc aacattaaaa ttcccttgtt ctatgtttag cttgaataat taccaaacca
      241 tttgcaatta gaactctagg atatgacctc acactgattt attcctccgt ttctttctgt
      301 atttaataca tttcagatac tgaaaatacc aaatctttgt ccttttattt tgatgtttat
      361 cagtaatgga aacattccaa aacaatcagc caaataccta tgctttgttc atttattgcc
      421 ttctctgaag ataaattgac tgtactcaac tctcttcagc atttttcttc acctagatat
      481 tattgccttg tgcagccacc ccaaggtgac tgttatcact taattaaatc cttgcacgct
      541 gggaagaaaa aacaacattg ttcgttcata accccaagga ggtttttttt ttcctttaag
      601 ccactaagct ttttccctgt tttattaact tattcctggc tacaacaaga catactttgt
      661 tgatgagcaa aaggttgtat tagcttttta ttttctgggt aaacttatct tttctctggg
      721 aaaaaaatat gggcattaca acaaaggaaa aaaatgggat ctctccaaac cctgcagttc
      781 tagtaaaggt ctgtgtaaac atcaagatag taaagagaaa caggggagta gcaggaagga
      841 gatgaaaaaa taaaatgcaa acatagaatt ggaacaagac aaaaaagtaa gatgacgtgt
      901 atatac
//
LOCUS       KCKM01002239             985 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35187apa ultra-conserved element locus
            uce-3193, sequence.
ACCESSION   KCKM01002239
VERSION     KCKM01002239.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 985)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 985)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..985
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35187apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>985
                     /note="ultra-conserved element locus uce-3193"
BASE COUNT          313 a          197 c          161 g          314 t
ORIGIN      
        1 ggagcaacag aaggaaaaat gaaggaaatt gtacctccag caattttatg ggcagctatt
       61 ttcttcatta agccttcttg ctctgcttag ataacataag tagattatgt ctacagcatt
      121 aaacgggttt tgaaaggata cagtgcttta gcttctaccc ttcttcaggg cacaaactgc
      181 cctttcttat ttggacagta tataaacagc acccagcata gtaagacatt gatcctgact
      241 ggggtctcaa ccaactctgc aaatattagt acatgtaata ttataatagg aggttattat
      301 ggttaatact gggtcatccc aagaagtccc aggagataca tcaaagatga atatgcccag
      361 gtaaattgtc tgtccttttc tagaatctga agaggaaagg tttcagacca cctcatgtca
      421 ctcctaatat gaaagtacgg ggttacgctc aaacatgtgt tcaaatcaga aacatacagt
      481 actatgaaat gaaccatcag gccatccatg aatttgtttt aacaatccaa caacatcacc
      541 atttctcatt catccactta gcttaatttt cctaccatca ctttcattgc tgaggttgtc
      601 tctattaagc cattttttgt gcatcattaa cttttaacca ggcatcgata gctttattgt
      661 ttaaattgcg tatgacttta tttaacgtca gcatttcttc tggctcctga catgaagtca
      721 cattttataa ctaattaaat tgatccctgg gaagcaaaag ccactaaaca gaattattcg
      781 tacccaagtg tcaatatatt aaatcaaagg gctaatgagt tgggtcactg cttcttttat
      841 ctgaaagcta ctgcagaata gaattcatac caatctctgc tttctgctta aacaatcaat
      901 tttatttaaa ccaaaggtaa gtaatgaata cattttgata tagctctgaa gaagccattt
      961 aagccagttt ttaccacttg catat
//
LOCUS       KCKM01002240            1189 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35202apa ultra-conserved element locus
            uce-4207, sequence.
ACCESSION   KCKM01002240
VERSION     KCKM01002240.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1189)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1189)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1189
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35202apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1189
                     /note="ultra-conserved element locus uce-4207"
BASE COUNT          305 a          265 c          318 g          301 t
ORIGIN      
        1 aggatgttaa cagagcatgt tggtaacctc tgcttttatg tgcctcagga tgatgtgtta
       61 agttagctgt ttgttgtact gcccggagag cttaagctcg agtggttcct cacaggcatg
      121 tcctggtgat gctaacggcc aaacacacca gctgctggaa ccttcaacag ctgcagagct
      181 gtgtgcagtg caggactatg tggattgctg ccgtcattaa cccattaata ttgcaggtat
      241 tccctgttga gtgcttctgg aaaattgtgc tgaaatggga gcacccaagt ttactttctc
      301 acatctgtcg tatgctgcct catcttaaac tgccaaacat cagtgatatc ttctgcggat
      361 cttagactgt tacacaactc tataaaagtg tagagaagaa tgtgctgctg tgtagatttc
      421 agactctaag cacgttatga ataatactgt ctttatttct acagtgggag ccaagaagaa
      481 aggtttgctc ccgggtggaa cagggaatat cctccttccc ttgatagtct tgctcaagaa
      541 agacactctg gcaacttctc tggcagagaa tcacttcctt ttgatatcca ggcactcaca
      601 ggcctcctca atcctcagtt tgccaacaga gaggaacctt ctttcagctt tggagctaga
      661 gatggaccac gtagtgactt cagaggtggg gaggggcacc acgatttcag ggccagagat
      721 ttcccaccat ctgacttcca gggcagagat gagtctcaga tggatttcag aggtagggag
      781 ccaccgtctt ctgagtatag gggcagggat atgtactctg gagactttcg ggagcgagag
      841 gggccaccta tggacttcag aggtggggac gttccttcag tggactacag gaacagggac
      901 acgttccgca tgagctacag ggatagggaa gcacataata tggattacag gggcagagat
      961 gaacctccat cagacttcag gggaaggggg tcttttgacc tagacttcag agggcgagac
     1021 ggatctcact cggactttag ggcaagagac atgtctgagg tagactacag gggcagagag
     1081 catacctatt ccgacttcag aaacagggac gtacctgatc tggacttcag gggcgtgggc
     1141 acctctgatt tggacttcag aaacagaaat gcaccatcgt cagacttca
//
LOCUS       KCKM01002241             565 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35218apa ultra-conserved element locus
            uce-4711, sequence.
ACCESSION   KCKM01002241
VERSION     KCKM01002241.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 565)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 565)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..565
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35218apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>565
                     /note="ultra-conserved element locus uce-4711"
BASE COUNT          174 a          112 c          122 g          157 t
ORIGIN      
        1 gaggaacaga gagcgagtga gatttcccaa gtgtcttatt ctctcccagg tctacaacct
       61 aacaggagtg tagagagctc agtagtttct tctcattcca ttaagtgaga tctaattgtg
      121 tctcttctgt ctgttggcag atgcagtttc tacataacaa cagcccagag acagagctgg
      181 ctgattaatg cctccagctg tcatatgccc cattatctgt gcatttgcat aacttaatgg
      241 tttaggacag gggagagagg atgcttaatt taatgtttag caggcccttg atagctgaat
      301 aatttaagaa ctgtcaaggg aggtcagtcc tacagcgatt cagcaagaca gctatgattt
      361 ctgaatatca ttaaaatcct tacttaggat aatttgaaaa aaagaagaga gggagcatgg
      421 aagaacaaca atgcctgaaa ggaagccctg cttttctgtt aaccattcct tccctgaaga
      481 ctaggagaag gatttggaca aaaaaatatc aattcatatc atcgccatga gaaaaagggt
      541 taactgtatg ctttccctcc cctac
//
LOCUS       KCKM01002242             766 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35233apa ultra-conserved element locus
            uce-4174, sequence.
ACCESSION   KCKM01002242
VERSION     KCKM01002242.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 766)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 766)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..766
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35233apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>766
                     /note="ultra-conserved element locus uce-4174"
BASE COUNT          217 a          137 c          161 g          251 t
ORIGIN      
        1 cttgaaattc ggattttttc ttccttttct tttagaggaa tcaacagctg caacaacaca
       61 gaagggaaga attatacata cgtacagcct taaggtgtca aacaggtgtt aatacttgga
      121 atcatagcga tgaattggtt ctggagtgaa aagcgaatat aataacatta ctaaagccat
      181 aaagttttag tagatatatg gaaattacat aggattgtta ccctcaggcc ctctggattt
      241 tttcagtcag cttaagattt acacaaggca attcttcatt tttgataaac ttctgaaggc
      301 tcccgcagta gctgcttaag gttcattaaa atgtaattaa ttaatgattt gctgctgaat
      361 agctgctgac tgtggttttc ttttcacttg tccgacagca tgagtcacag ttgccaagcc
      421 gacaccgaaa ctatttgcag actatagcac ctattgatga gtttttcaat ctgcagtcat
      481 ttgcatagga aagatgcccg aatacataca gtacgtggaa gagagcctcg taatttgggg
      541 gattgaagtg actgtcctgc tggtgttttc ctccagctct aaggcaacat tagtatcaga
      601 gctggcaggt aaagcttctg tgctttgcct taaactatgg ttcaggagaa aggcagctct
      661 tatttcaaat tcctggtgaa acgggtacac aagtattcat gatttgcagg cttctatttg
      721 agggtttttt cattgttgct tttttaatgt gccctataaa ttggtt
//
LOCUS       KCKM01002243             988 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35249apa ultra-conserved element locus
            uce-5930, sequence.
ACCESSION   KCKM01002243
VERSION     KCKM01002243.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 988)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 988)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..988
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35249apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>988
                     /note="ultra-conserved element locus uce-5930"
BASE COUNT          304 a          173 c          160 g          351 t
ORIGIN      
        1 tattgattta tttattaatt tattaatctc acaagatgaa gctcctgaat ttttattcct
       61 tttttgtttt ctatcttgcc aagtcctcag tgatgtccag ggaaatgtcc attcgtcttc
      121 ccaatttaca cacagacatc tctccttttt gtggaggaat gacagtattt actcgactta
      181 catacagcag acataatatc acagttactc agtaccaaaa gctatagtgt attgaaaaaa
      241 atctgatttc caagagctgt ttctaatacc tactaaaatt gatagcaaga aaaaaatgtt
      301 tttgcattac ttaggtgtta aaattacatg gtggtgttcc tttattttca aaaaccaaac
      361 ctaatcctgt taattcaaag tgaataacaa acaggactaa gactttttcc caagttgtta
      421 catttattca acctgcttgt gttttgttct tcatcataat tatttccaag tcaaatctgc
      481 gctgatttcc ttgcggacct acatacctct gactaactta aagaattgag ctgggataat
      541 tcacactatt ccttgggggt catgttctct gttttttttc aaggacattt ttattacaaa
      601 gctgatgaaa tttgcatatt aattcatttc tttcaatttt ttaagattaa atgttgtcaa
      661 catgtatcag tgcaaggctc tgacagtgct gatgaaatgg gtcagtcaag cttgaacatt
      721 tagagtaatg cagccatctg caacccccaa gccccttgtg tagtttagtg ctaccattgc
      781 aacttgatta aaaaaaaagt tttattcaat gcaggatatt aaaatattat ctgtgaaatg
      841 atatgtgtta ctcctgccat ttgcagggaa agtatatttg acaacaaaat ggatctaagg
      901 atctccttgc tgatttagag ttagtgcttt gtcaatctta attaaactcc agtaggaaaa
      961 gtgtaggggg aaaaaaagag tttcttct
//
LOCUS       KCKM01002244            1199 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35264apa ultra-conserved element locus
            uce-2701, sequence.
ACCESSION   KCKM01002244
VERSION     KCKM01002244.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1199)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1199)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1199
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35264apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1199
                     /note="ultra-conserved element locus uce-2701"
BASE COUNT          253 a          278 c          351 g          317 t
ORIGIN      
        1 gcacctctgc ccagacctct ggagaatcgc acttctccta gtaaatctgc gttcctgcac
       61 tcggggatga aaatgcagaa ggcaggacca ccagtccctg cctcgcatat aacaccagca
      121 gctgtacagc ctcccatgat ccggcgagac atcaccttcc ctccgggatc ggtagaagct
      181 acgcaaccgg tgttaaagca gaggagacgg ctgacagcga aagatatcgg taagaagaaa
      241 ctcctgcttt tctgcttgtg cctctttagg gaatgggtgc tgccattatc ctttggtact
      301 gccaagtgga agggttccgc tggctgggaa agaattacat ttttgcaagt tagtggcatt
      361 ttcagacatc gttttggcgt tgtctgtgga gagattgctg gtacgtacgg tctgtacgtc
      421 actttaaaca ggctttgctc tttgtgcctc cacaaagcag tatcaggtat ctcctttttg
      481 tttttaaact tgaggagctg gaagtatcgt gtgtttatgt tacaggaact cctgaagcct
      541 ggagagtgat gatgtctctg aagtccgggc tgctagctga aagtacgtgg gccttagata
      601 ccataaacat cctgctctac gatgacaaca gcataatgac cttcaacctc agccaggtgg
      661 gtgcagatgc tctctgatgc aggtcttttg aggcgctaat gctgtagggt ttgctgtcag
      721 tgaggtggca acgagcagct catgcccctt gtagggccaa ctcctggatg cccctgtacc
      781 tgtggagcca ggttggaaga gggcgtaggg tctgagcacg ctggttactc acgtgtacgt
      841 aaacgtgtgt attcttctct ctggtgagag gtgtcgcctc tggaaccgag aaagggggta
      901 acggtgggga ggccgcaatg gcctttgcag cgagagcgct ttgaagagct gggggctgcg
      961 ggtgctgttg gtgttcgttc acctctggct gttgcaaaaa ccgcttggca gtactgagaa
     1021 ggctgttttg cttagtgcag ccctgcacct ccctgggtgt taaccggaga ggaggtacaa
     1081 ccaagagcac gtgtgtgttt gcacaggtgt gtgtggagcg ggtgggcttg gatactgaca
     1141 gtcagtatct ggttttgcct ttgttccttc tctcagggga cggaaagctc tctcttgca
//
LOCUS       KCKM01002245             293 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35280apa ultra-conserved element locus
            uce-672, sequence.
ACCESSION   KCKM01002245
VERSION     KCKM01002245.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 293)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 293)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35280apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>293
                     /note="ultra-conserved element locus uce-672"
BASE COUNT           65 a           65 c           50 g          113 t
ORIGIN      
        1 atttatatat gtgtgtgttt tctgtatgtg tctctctgtt tatatatatt ttatatataa
       61 aaattggtca gtctgttaaa ctggatgtgt tttttttgtt tttaataaag tttgccctgc
      121 ctttgtcata tttttttttt attcctttac cacaggatag ctacagctct cagggtattt
      181 ctcagccccc aaccccaggc aacctgccag tcccttcccc aatgtcccca agctctgcta
      241 gcatctcctc atttcatgga gatgaaagtg atagcattag cagcccaggc tgg
//
LOCUS       KCKM01002246             960 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35296apa ultra-conserved element locus
            uce-4528, sequence.
ACCESSION   KCKM01002246
VERSION     KCKM01002246.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 960)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 960)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..960
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35296apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>960
                     /note="ultra-conserved element locus uce-4528"
BASE COUNT          276 a          234 c          215 g          235 t
ORIGIN      
        1 gtcaaagaaa gaaggcaatg aagacaagac atgaatgcat ccctctggtt accagatcac
       61 acagctgaag acaccatttc ctgatgcaga ctgcacctct gcttccacag atgctcccct
      121 gccctgctgc catctgctcc tctctccagg tccatctcct caaggcagag ctacctgtgc
      181 tagagcagga gccactggac tttctcctgt gacacaagca gccttgatgc cacctcgagc
      241 tgtctcaaac cagagctggg gacagatagc gagggatgag cctggggctg ctcagtggaa
      301 actccattga ttactcggtg ccgtaccttc ccgacatcat gaacacctca gccccgggga
      361 aaaatctggg ttctatcagc tcttataagc aagtgtttcg aaaggtttac agaaaagtaa
      421 agtaaacaga gctctgagta acaaaagagc cccgtttatg cattctttga ttcactgtaa
      481 aggatggtgt aaactgactt tttaaccaag cattaggcaa gatttgggcc cccgccatta
      541 tataataaac agtgacatgg ctatattaaa atatttactt aatgcactga agtgacttat
      601 agtatgagtg gctactcaat aggatggcct aagtgttaag gcgtcaggtg ccatcgcctg
      661 tataaatatt ctgtgtgcac ttgtttatag gaaaacccca tctggatttg gctaaaacag
      721 cagacaccct gctgacccca gtttttgcta ttggaaaata taacacaagt gttcactcat
      781 ctagaataac agcagcagtt aagtgccatc tgacagacag aagggtattg gcttttctca
      841 atagacagca ggcttggtgc tgtgaagggc ttcacagaag gagctcccca agatttacag
      901 catcctgtgg accagaagca aaaggctctg cctcccaact cgtagacgag acatcaggat
//
LOCUS       KCKM01002247             721 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35311apa ultra-conserved element locus
            uce-308, sequence.
ACCESSION   KCKM01002247
VERSION     KCKM01002247.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 721)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 721)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35311apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>721
                     /note="ultra-conserved element locus uce-308"
BASE COUNT          217 a          141 c          125 g          238 t
ORIGIN      
        1 acgtttacca agtttgaata atggcttatt tatgcctgta aaaaaattac tttcatgcac
       61 ataataaaga aatctgtctt tttcagtgat agtatattct tcttgtgaaa tagaattcaa
      121 tgaacagtgg cctctattcg agaccattta taattctgca acagtgctgg gtgcacattt
      181 actaaagtgt gaccttgggc aagacctgta gtcacagtgc aaagtaaaat gaagcattgc
      241 ccctgcttcc tttctcctct ttggaagtta aaaatactgt gcatggcttt tctacagttt
      301 tgcacatttg agttagctcc ttacacagcg gataccctta ataaaatgac aacagtaatt
      361 tagttttgtc atttgaactg gcactggcta catggctcaa aaatacagta ttagagtagt
      421 tgaatgtgtg tcgagtctca ttcttttttc cattttccag agagctgctt ttccattagc
      481 tttgggaaaa cacactggca gattcattta aaataagctc agctccaccc ttcatataag
      541 tgacttagcc tgtgcaataa gaaattaaga tcaagggacg ttttttcatt agcctgtcgt
      601 tctgttattt gcattccaaa gacagcatta cgaaacacaa ccatatctgt aatataactc
      661 atctcaggga gccttaagac acttactgta gcatatgcta actattacaa gatgccttga
      721 t
//
LOCUS       KCKM01002248            1011 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35326apa ultra-conserved element locus
            uce-6576, sequence.
ACCESSION   KCKM01002248
VERSION     KCKM01002248.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1011)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1011)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1011
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35326apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1011
                     /note="ultra-conserved element locus uce-6576"
BASE COUNT          247 a          230 c          240 g          294 t
ORIGIN      
        1 agggagaaaa catctcggag tgctttgtta tgtggtcagt agtgctcctg cccacaagca
       61 ttagtgcaaa tggtgagcaa accagttgat tatattgaaa tcaatgttgg cttagattta
      121 aagctctgtt tctccttgtg ttgcctccgt cccggctgct gcaggctgtg tcctgccaga
      181 tctggtgcca aagactgggc tgccccacca gccaccaccg cggcggagat ccacctttgg
      241 ctgcctgcag cccttggcca gcccggggaa gaggcacagc tgccaggcgt gggtttcctt
      301 tcccccagcc ttcctgccaa aggttggggc acagagattt ggggcaacgt taggagttag
      361 gaggttgccc agaggattgg gtagccctgg tatcagcagc tggggtcttg gtgctgacct
      421 cctcatctaa gtgacagtgg gaagggaaga cttcttgaca catttgtggc atgtcaagca
      481 cagctcagtt ctggtagctt ctcccacctt tgactaattg ctgacctgac atctttctga
      541 tagtgacctt gtttcagcta gtaattcaaa tatctttcag tgtcagaaat aataagtgcc
      601 acagtgagat gaacaagcag agcttaagtt gagcacagat taatggggtt ttaatattcc
      661 taatttaatc actcctttct gtctgaatgt gtgcaacatg atgtagcagc taattatttt
      721 tttaaccatg atgaggatct ttcctaatca tttttatatt taacatgaat gaagggaggg
      781 cagtgattaa tgagggaata aatctttcga aacagaagca agcacgtgat cagttaaaaa
      841 tacagctgtc tgatttattt ttttcccccc tttccctgta gtgcaaatac ttaaccagct
      901 gcaccttctc agctcaatag cgagctgttt tcagcccaaa agaaagacct gaaactttgc
      961 ttatccctcc agtgggtcta ttggcatctc tctgcgtgat catctttgtg a
//
LOCUS       KCKM01002249             743 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35341apa ultra-conserved element locus
            uce-2245, sequence.
ACCESSION   KCKM01002249
VERSION     KCKM01002249.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 743)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 743)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..743
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35341apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>743
                     /note="ultra-conserved element locus uce-2245"
BASE COUNT          214 a          177 c          130 g          222 t
ORIGIN      
        1 aaaaaagtgt cagatcaaaa gggggagtat gaaagcgggt ggctaagcag gttgctggga
       61 tgctaatgat tgcttccttc attctctgag tgtcacgcac aacatctcta agcccagcgc
      121 agcgcgtaag ccacacaaat agccatattt gttaacattc atgtgactct ttcgtctgag
      181 ctgtatttcc ttgagtacac cacaatgaag agtttctttt aatagggatc aaccaggaaa
      241 aacaactgtg agggactttt ctctccctct ccctccctct ctctctcact ccctctctca
      301 ctctctctaa accttttaca ctgcggttga acaagcctct ggataaagac tttatccaaa
      361 aaccccctct ttaaagttat ttcaaatttc tctgcaaggc tttcagaaat ctgtttgttt
      421 gagggcagaa ttagatgtga ccggcgtttt attgtgacat aaaaccatat ttcttccctg
      481 gaagattaaa aaataaaatc ggttaataag aaaagctgtc agcaacagaa aatggctgac
      541 ataatccgtt tatcctccga gcaataaaga tattggtcct tgggagtcta tcctctctct
      601 catgttattt cgcccaaaac attatcttcc cagcattctg atggattaag aagtcatatg
      661 ggagatagca gggaaatgac agatacaaaa aaaataatat cctttcattt cccctcctcc
      721 ctgcactctc tctctctctc tct
//
LOCUS       KCKM01002250             786 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35355apa ultra-conserved element locus
            uce-4250, sequence.
ACCESSION   KCKM01002250
VERSION     KCKM01002250.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 786)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 786)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..786
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35355apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>786
                     /note="ultra-conserved element locus uce-4250"
BASE COUNT          227 a          130 c          153 g          276 t
ORIGIN      
        1 taatagcaca gtatgaatat tcatctatgt ttaatattca tttatactca gaagtttata
       61 gctgatccct ttaagttttg gtgccagagc cagtgttcaa agggttatgc tgccattttt
      121 tctgcaaaac gtttacattt atctgctgta aaataggctg aatggcaccg aagagtgtcg
      181 tgtttagttt taaaatgcca caaataacag atttatagat ttttctaaat acattatttt
      241 agcttgacag cattaatcat tcatgcttcc ttctttcatt tttctacctg caatggatta
      301 ttgaaacaga aaataacaac gggaaaggct acaagcagta tcaaaatgtc aagtttgtac
      361 ttacagttgt atgtgcgtag acagggtcaa gagcctcaat tatttgtata tgtacacagt
      421 ggtactacat gaaaggttat gtcacctgca gctattttct tgcagattta aataggactg
      481 atattcaact ccacagtcag ccactgacat ggaacataga attgtaaaat actatgaact
      541 cttatgtcag gacctaaaat atgaactggg tgattgcaag gtgtagctgt gggcaatcct
      601 atgtattgca gtgtaactcc tttaaattac tttgtgttat ccctgacctg ttcttttcat
      661 ttaagcataa gccagaaaca acatggaagt actttccagg gagaagaaaa tcccctggtg
      721 ttgcctattt ttgcagtagt gtttgcctgg ggtttgaggg gttttgtggt ttttgttttt
      781 gttttt
//
LOCUS       KCKM01002251             272 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35369apa ultra-conserved element locus
            uce-2179, sequence.
ACCESSION   KCKM01002251
VERSION     KCKM01002251.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 272)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 272)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35369apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>272
                     /note="ultra-conserved element locus uce-2179"
BASE COUNT           93 a           36 c           64 g           79 t
ORIGIN      
        1 ctaaggactt gagctctcta agttcgtgac tctaaatcaa tttagatggt gcctcaaagc
       61 aaagagtcat gaaactggag tgggtccaga gtgaattaat ctgaaattaa tttgattttg
      121 aaaggctcca tctggctgtg tttggaaaag gcatttagac agatatataa acaaatgatc
      181 atctgtattc tatataccag atgtggtgtc agaaaaatga agaaatggtt taaaaaaaaa
      241 gagtcagctg aggggggttt tgctgtaacg at
//
LOCUS       KCKM01002252             813 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35383apa ultra-conserved element locus
            uce-7157, sequence.
ACCESSION   KCKM01002252
VERSION     KCKM01002252.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 813)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 813)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..813
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35383apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>813
                     /note="ultra-conserved element locus uce-7157"
BASE COUNT          278 a          121 c          148 g          266 t
ORIGIN      
        1 attgtccatg tcatataacg gaaaaataaa gagtaaatta ggaaacaata aaaaaaccca
       61 aagggtgaaa acaaatttcc cttttttttc cccaggagta cttcagtctg tttcacaact
      121 gtttcttaag ggtatgaggt gcctattcat agttagtaaa tgaaatagca tttttgtttt
      181 aattcattgc ttctttaaca aatgctaact cccatctctg cttctttaaa tccacaaaat
      241 ctccacgttc aattctaaga agtattataa aggctgtaaa tcttgtttta atggaatgta
      301 catttagcta tgaggagata attgacgtta tggagggcct agatgctgaa ttatataggt
      361 tatctaatac aaaggggact cattaccgaa gcactacaaa caagtagtaa tatatgtata
      421 ttgttctgag tggcgttata gcaaaagtgt tcgggtctgc agggatttat aaaacacaag
      481 aaaacagcag acatgcactt gtaaatttgt ctcatttgtc tctgaagtta aaggttattc
      541 ccttgatctg aatttgtaat aaaaacatgc tagactaagg tttgtagaga atgtttgaat
      601 atgtaaattg tgtataatga taggcaatta tagggtaaaa actggacctt atgaatgtta
      661 cagaattgca tggagcatca aagtattttc cttcagatga aatatttatc ttttatgcat
      721 gttataagca ctttttcaaa ggtattcagc aacctatttg agtggagggt tgacaaaaat
      781 caaaccatta caaccgacta agactgtagg ctt
//
LOCUS       KCKM01002253             393 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35398apa ultra-conserved element locus
            uce-4950, sequence.
ACCESSION   KCKM01002253
VERSION     KCKM01002253.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 393)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 393)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35398apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>393
                     /note="ultra-conserved element locus uce-4950"
BASE COUNT          124 a           68 c           74 g          127 t
ORIGIN      
        1 tttaatgagt ctgagactac acctgatttg ttttgatgca taagatggca gtgtcaagac
       61 aagaaatctg cactgtagca agtgacatat atttaccctt tttgacctaa gcaatctgca
      121 ttgtacattc acagcaatct gtgcgtttgc tatgtgctgt gtggtagtac ttacttgaca
      181 attccctgcc tccaaaggaa agcaagttaa aacataatac aagcattaac ggtttctttc
      241 cagtaattca aaataaatgt gcttatatta cgttatcgga tgaatgagtt ccgggaaaga
      301 caagacacag tcagacatta gagggctttt cagctcttta gatactgtga atacagaaaa
      361 taaatttctg ttactgatta ttatcttgat gat
//
LOCUS       KCKM01002254             753 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35412apa ultra-conserved element locus
            uce-2346, sequence.
ACCESSION   KCKM01002254
VERSION     KCKM01002254.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 753)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 753)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..753
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35412apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>753
                     /note="ultra-conserved element locus uce-2346"
BASE COUNT          190 a          191 c          127 g          245 t
ORIGIN      
        1 atcaaacagc aaatcttgaa ggaagtctct ctgatgagat aattttattg ctcattcgcc
       61 ctgcatttgc tgtacttaaa ataaacactt gtaccagtgg cctttttatt atccaatggg
      121 ggggggttga aatcacacat acaccagtcc tttttctttc tgctagcaaa gggaggcgat
      181 ttgatccaac gtgggctgaa acctgagtag gtcactgtac accacgataa aattccctaa
      241 tccctgagcc aaatttcccc gagggggccc tcctacttct ccttcacttt ccaagctgac
      301 ttttccattc cccctcttgt cttttcctcc ccttcatctc tttcatttcc cctaccttaa
      361 agccttgata tctgatctgc tgcctttact cgggttacag tttttacagc ttaggctgtc
      421 tattgctgta tacattcctt tctttctgct ctgccgtgat tacttaccag agcttatttt
      481 acactggtcc agatgaaagc agttcagatg aagggaaaca gtcagcctgt ttgaacatta
      541 cagatatgaa cctacacaag ggcacattgt gctccctctg tcatttcgct gcaaacattc
      601 tgcacagtgt aaccaatttg ttacattatt gtattccccg ggtttaccag gaacaactag
      661 acatcttaat tcaccagtca agaaaaagta agcgattgcc acaggatttt gactttccaa
      721 cctgtctaaa attcaaactg cctttttttt taa
//
LOCUS       KCKM01002255             240 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35428apa ultra-conserved element locus
            uce-2180, sequence.
ACCESSION   KCKM01002255
VERSION     KCKM01002255.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 240)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 240)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35428apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>240
                     /note="ultra-conserved element locus uce-2180"
BASE COUNT           73 a           46 c           35 g           86 t
ORIGIN      
        1 gggtaaccat tctcgttaga ctttgcttaa tagaccttat attttatgtt ttcaacgaac
       61 aactcataca gggttgagcc aagggcttaa tcactcttaa tacaataaag cagcacttta
      121 aaatattatt aacctcatct gtctagattt ggaactaata gaccattgtg tgtgtattgt
      181 ctttatccct gccagttatg tacatattta ttaatccact cttccagagg aaaaatttct
//
LOCUS       KCKM01002256             777 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35442apa ultra-conserved element locus
            uce-2119, sequence.
ACCESSION   KCKM01002256
VERSION     KCKM01002256.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 777)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 777)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..777
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35442apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>777
                     /note="ultra-conserved element locus uce-2119"
BASE COUNT          170 a          182 c          191 g          234 t
ORIGIN      
        1 ctttaacccg gttttgcctc cgtcggaggg cgcagccgcg tgtgcggccc cgcaggagcg
       61 gccctttgct cctgacaaaa gggccggagc atccgcggcg cgctcggtcc cttcgccgga
      121 ggcatccttc ccaaaagcag gcagatgata actgcgtctc ctgctgtacc tgtaacaatt
      181 taattgtgtg agtcagccca gtcaagcatc cctggcttat gactgggaga catgaaattc
      241 attgtcatta ttgtccctgt cattttggat cattatatcc tgctgcagaa ttttcctcac
      301 tccagtgctt tcttacctcc aggaagcggg gattatggct gaggttgggg tgggggcagg
      361 actgtgaact acatttacct caggggagcc acagattaaa ttggctttgc tctctgactt
      421 gctggattcg tctgtttgta cgccgtgggt ttaaggttgg aaatgatgaa tattctagtg
      481 aattctgtgg ctcactctct ttttctattt tttttttaat gctcctataa gcaaaggatg
      541 ggtttcatgt cccttaagaa gtgaatgggg aataattctt cagatcacgt tacctgcaag
      601 atttaagatt attcccaagc aaaacgacat tatttgcgca ccgcgctgca aacatctgag
      661 cgttccccag cgcgttgtgg cttttagggg gaaagactcc atcgaagcat gtaactccac
      721 tgtaatttat atgtgtgcct tttatgccat cttaatagtc ggtcattagt tgatacg
//
LOCUS       KCKM01002257             816 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35458apa ultra-conserved element locus
            uce-2842, sequence.
ACCESSION   KCKM01002257
VERSION     KCKM01002257.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 816)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 816)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..816
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35458apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>816
                     /note="ultra-conserved element locus uce-2842"
BASE COUNT          243 a          138 c          161 g          274 t
ORIGIN      
        1 tatgcctttc acagtattcc atatattatc atatttactt tttttctcag ttcctagaag
       61 tactccttga tgtacgacag tgtgttttga aaatcaacat cttgcttcct gctggagcca
      121 gtagatatgc catcctgtat tagctggttt ctaatttttt ctctttgtgc taggaaaaag
      181 aaatttgctg actttagatc ttagcctatc agacgaagac ttactggtgc attagaggcc
      241 tattcaaaac agggcttttc ttgcaacagg agcccctaac aattggtaat gaggacagat
      301 tctgaattgt ttgtgagcag ctgcttagta ggtaagagct tgtttggatt caattgaaca
      361 gtgtttttag aagcagttac tgacccctga cccttcctac agactgggtt gatgggatta
      421 gggaaagcta gcgttcagct tacacttggc tataacaagc tggcaagaga taacatactt
      481 tttaattatc aagttacacc tctgccaaag tttgtctgcg aatttaccaa atggggcaat
      541 gaactataag aaatcaagct aggctatggg ataatagtta cataagaaaa cagtcttgag
      601 ggagatataa ttaatatatg tgtgtgattt ttttcctttg caaatatttt gatttttcac
      661 atcttattct acatacctca tgtgtgcatt atagaggcat acattgcatg tggtatttat
      721 accagtgcat cttacagtgc atgggttaga tttacttctc agagttgtca aataggtaga
      781 caaggagaaa aacaacagat gaaatttaaa ttaaaa
//
LOCUS       KCKM01002258             538 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35474apa ultra-conserved element locus
            uce-5392, sequence.
ACCESSION   KCKM01002258
VERSION     KCKM01002258.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 538)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 538)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..538
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35474apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>538
                     /note="ultra-conserved element locus uce-5392"
BASE COUNT          171 a           89 c          100 g          178 t
ORIGIN      
        1 gcatacccta aaccttaaaa ggaaaataaa agctgctatt tcctgttttc ataaatgaaa
       61 agatgtttca agtattggga gacactgaaa gaaattctgc agtttgaaga tacttcaact
      121 taactactaa ttgcagagga ccagtgggcg taattttggc actatattag ctttgccact
      181 ccatgaataa tttgcataca aaatgcttta ttttggcaat ctattaaaga gctatacagt
      241 atttgtggct tatcgcattc acacaggaag caggatcctt ggccatctcg ttaaattctg
      301 ttgatgcata acaatttaaa gcatggcaca agctggtatg acatttaaag atgccttcac
      361 ttaattatat tacacaaata ttgggttgtt tatccttggg aataaagtct ttttgaagtc
      421 aaagttggca tgcgtataaa ggagtaaatt ttaactgatc cctcaagtgg gcctcctagc
      481 tgcaaattgg ggttcttgca ttttttaaat tatttgtgat aagaagcatt acactttg
//
LOCUS       KCKM01002259             484 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35490apa ultra-conserved element locus
            uce-4147, sequence.
ACCESSION   KCKM01002259
VERSION     KCKM01002259.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 484)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 484)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35490apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>484
                     /note="ultra-conserved element locus uce-4147"
BASE COUNT          151 a          101 c           93 g          139 t
ORIGIN      
        1 atcctccttc gggaaccaga gaaacagcaa aatagataga tgcctctaat ttatgtgagt
       61 ttaaaactag taccaagatt ggcttaatta cctgggaaca atgtatttct cctggattgc
      121 agatcagctc gttagcaata cacttttttt acttcccctt gaaattggta atacatccct
      181 cactcaaaac attgtctccc aatcaccatg gttactgcca ggttttccac aaggacccag
      241 catattcatc tgtcaagtat gctaatgggg aacggaccct gtcacacaaa ggagcaggct
      301 attcaaacat acatttggca aataattgta catgtcaaaa gaatgatgct tgttatttgc
      361 ctaatattat cccccagaag tgggaaatag ttcagctctc aatgcaaaat ggcttgccct
      421 tatcaaatag gcaatttgct gataatttag actattagag atcttggggt ggggagacaa
      481 aggg
//
LOCUS       KCKM01002260             982 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35521apa ultra-conserved element locus
            uce-7487, sequence.
ACCESSION   KCKM01002260
VERSION     KCKM01002260.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 982)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 982)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..982
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35521apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>982
                     /note="ultra-conserved element locus uce-7487"
BASE COUNT          313 a          207 c          166 g          296 t
ORIGIN      
        1 tagtcagcaa cttatttggc tatgtatttt agacattcac agtatgcaga aaaggggaaa
       61 tcaagtgaaa attaagaaga atattcacat aagaaaaatg gttgtctgca tatctatgtc
      121 ttaaattgtg ctgtggcttc aacaatttaa ctcaaaataa atcagaatta cagacagagg
      181 ctcagtaata attaagcttg taccttttcc atagttattg ccctcactga ccattctatt
      241 tacttagtaa acagtatctc ttcagctttc ctgtgtttca gtctgtgcta ggaaaacact
      301 agtctctccc aggttttagc tttctcagct cccccacatc atggtttgac ctgcaggcaa
      361 acgaagccat tcaaatattt gcttatcttg tcatctgttc tcatcagacc ttgcaattcc
      421 tgtcatgccc cacatgtcag tttaaagcat aacgtcatta atacctccag tgcactaatg
      481 gatgcttcac acatgaacgc attaatgaaa tgtgttattg ttttccctca caggacatta
      541 acaatctcac tcatgctgag cccctgaagc cctgcagtgc tgctggaaac cactagctat
      601 caaatgaacc ctcagttacg cctcagtaac tttaagttca agtttatcac taaagtgtca
      661 ctcatgtgag gagaagatac aagcctctaa ggtcttttgg gcccagcttc aattaccata
      721 aagagtaaca ggaggcaata gctgcaaggg aaaaatacac catcgtataa atgaaaccct
      781 gtcaagataa aataggaaag atctgggtgt caatgtagtc atttgtttct tgtttcttcc
      841 ctctgctgat ggcttggata atgaagacag gattgctctt ccagaggaaa gaaacacaaa
      901 tagtctagtt tcctgataaa aacattaaat ataacatgca ataaatattc ctgacaaaaa
      961 ccatattaaa attagctttt ct
//
LOCUS       KCKM01002261             998 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35537apa ultra-conserved element locus
            uce-6932, sequence.
ACCESSION   KCKM01002261
VERSION     KCKM01002261.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 998)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 998)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..998
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35537apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>998
                     /note="ultra-conserved element locus uce-6932"
BASE COUNT          286 a          282 c          213 g          217 t
ORIGIN      
        1 ctgacctagc tttcctcact ctgcacacag cagactgtcc acaagccgca caaaaagggc
       61 ttggaagaca ggggtggtca aatcctagtc agttaaggat ttgtctttgt ccaacagtac
      121 acctgcagtt gcatacagat aatgtacaga agtccacaga ccctccccct ggctacctca
      181 gcaacatgaa ctccattatc tttttctaag ggaaaggata ccttagatac aaacaccctg
      241 tctctgggag ccgtccccat ccaagtccca acagcacatc tgaaacgcac agccgccctt
      301 tgacacaggg aaactctgtc ctcatctcag cccctctgcc ctctggccca cataggacag
      361 agaaaagaag taatcacaca gcactggtgc cagaattcag caggaagcaa gctcccccct
      421 ctttctcttt ctttctcttt ctctttgtgt gtttctttca tccttcaaga cacaaacctg
      481 caagtgcgct cgtttaactc aagctgcctc gacttgcaac gtgagtctgt gaatttgcag
      541 gaacatttac aggtctgggg atcttgtaca aacaagtgct ttctcctctc tgagcaaggc
      601 tcacagtgac tgcaaaaagg caaaaggaaa gatgtctaag ctacagcgct tcagcagaaa
      661 gaaaatacac atgcaacacc ctaaacatca aagcaatccc cttgccccct cccgcagccc
      721 ccatgctgcc cactggagca tcgtgggctg atgaattttc cagcagcacc ccagctcccc
      781 aggacagtat ccccttgcat tagcgtaaag aaaaagaaat caggctctct gcacagtatt
      841 cacaaatgct gcattggatg catcagcaca ggccagaggg aggaagaagg ggaaagcgag
      901 gatgggaagg tgagaggtcc cagctagcta ctgacgatat cagtgaaagg agttctctga
      961 agtcagctac tcaagtagaa agaggccagc agctaaac
//
LOCUS       KCKM01002262             947 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35552apa ultra-conserved element locus
            uce-1183, sequence.
ACCESSION   KCKM01002262
VERSION     KCKM01002262.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 947)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 947)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..947
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35552apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>947
                     /note="ultra-conserved element locus uce-1183"
BASE COUNT          277 a          226 c          180 g          264 t
ORIGIN      
        1 ggactcattg gctagtgaat tatttattac aaatattatt aatgaattat ttattacaaa
       61 tactttctga cacgtaaaag ggagaagttt tctaggccct gcttccattt gctcacactg
      121 ttcacatcag tgtaagtccg ttgtaggagc caccttggtt tacaccagga gtgcaatgac
      181 cccgtctcct gcgcacctcc tggtagcaaa ctgagagtaa ccagaggcaa caggcccgtg
      241 tgtttacacc tctccgaaat aaggacacac tcctaaacaa gagaaacagt cccaagaggt
      301 gccacaaacc ggagaaaaca aacagcattt gagcaggaat attacagata aagcaaacac
      361 gtcatggcca cgaaagtcta aacacttgtt aaaccgtctg attttagaac atttcagcca
      421 tacaacatta ttcaactact catcactgtg agaacaggca atcaggaaag ctaatttctt
      481 aattagctct gctccggcgg taatgattgc agatcgtgtc aactaaaatc tgtttggatt
      541 tctgtaaatt ggagtccgac aagcctgcag ttccgtcgcc aacctgataa ctctcacccc
      601 cctgtctttt gttttccctt ccagcctttt tcctgtcgcc atctcggtat ttaatctgac
      661 accgccaggc agcaagaagg gtttactctt cccctcgccg agaaagagcg cgagagagga
      721 ggaaaagcaa aacatttacg tggggacagg agggctggct gcacaggaaa cctggaccaa
      781 acctaaactc ctgacaaaag cctttaatct ttcttacatt cctcaaggca ttctcctcct
      841 gtaataggac atattccttt caagtaagtc ctgataaggg aattcatttt tttttttttt
      901 tcaacaggaa atgtatatcc ttgtaagtct atcgtcttat ttacttt
//
LOCUS       KCKM01002263             963 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35567apa ultra-conserved element locus
            uce-5409, sequence.
ACCESSION   KCKM01002263
VERSION     KCKM01002263.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 963)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 963)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..963
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35567apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>963
                     /note="ultra-conserved element locus uce-5409"
BASE COUNT          297 a          173 c          187 g          306 t
ORIGIN      
        1 ttttttggta taggagatta atggacaaat agaggctaga tgacctgcac aaggtcatgc
       61 agtaagtcaa acagaacttt gtctcctgct gcatacttgt aatgcagact cacagtttca
      121 ctaaaaataa cttcacatcc aactcagcca agtgtgtgct taattttcta cgcaattttg
      181 tcaaaaccag cagtcttcac attttaccag gtcaacgtga ttcaaaactg agaaaagtaa
      241 atttatatga aaataattac aaatactcct gaaaaggatg tacgtataac aattatacca
      301 ttgatatcta attatgtttt gtggtgtttt tcttctttgt tttcagagtg cctgtaaaga
      361 tgacgaccaa agcaccaaca tttacgcagc cattacaaag tgttgtggca ctggagggta
      421 gtgccgcaac ctttgaggct catattagtg gtaaggtttt gattttgatt cattcttgca
      481 agactgatta ttttttttgg tagtgtttat gctaaggcaa acaacacttt tcatagatct
      541 taatctgatc tgagtagcta aaggtcagtg ctgaaatgtg aatatatatc cacatcatat
      601 ggtactagac ctcagcactg ttgggtgcta tttgatatcc acaaacaata ctgcatgatg
      661 ttacaaggct tcacaggcaa ccatcaataa tcctgccaat gagactggtg tctaattttc
      721 atgtattttt gaatcttcaa aaggggaaat aacattaaaa gtatatacaa ctgtgctagt
      781 gagggaactt catctgcttg cagaaagagt aatcttgttt ggatgatcaa acagaatgag
      841 gaattgggag tcaaggtgca aaaaacaagg tgtatgctag ttcttcattg acctagtgct
      901 gagccttact ctggctacgc tgtatttcta actcccgtgc ccttgagttt acttaagtcc
      961 aga
//
LOCUS       KCKM01002264             944 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35583apa ultra-conserved element locus
            uce-4232, sequence.
ACCESSION   KCKM01002264
VERSION     KCKM01002264.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 944)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 944)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..944
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35583apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>944
                     /note="ultra-conserved element locus uce-4232"
BASE COUNT          275 a          183 c          196 g          290 t
ORIGIN      
        1 agtgcaagtt gagggatgat ggcaaataca ggagcagggg gctgcaggga tgctgtagcg
       61 cgaggaaact tgtctgtgtt ttacctccgt gcaggtgtaa cccatgctgc tgcagcagcg
      121 tggaggggaa tatctccgtg ttcattaaac gataaataat ccaggttatt tctgggctta
      181 gtctcttcat ttcttcagtg cagaccggtt ccacatggct cgctaagcgg gttttggatc
      241 agcgctcgtg aaggcagaac agtggggatt gtagcgtgaa atttatcccc tttccaagac
      301 tgcgcattca gtttccttta ggtgggtatt tgagcaaagc ctgcagtgct ctgtttctgt
      361 atctacttct agcttggact tcgtccttaa cagagacatg aaaacatgag ctcttgatct
      421 gttcctttga gctgcaccct tttagtggac atgaagaaaa taagaccaga catcaatgat
      481 taatgcagga tcttggaaga aaatattgca gggtgccttg ctgtttgatt acaagccttg
      541 gaattagtca acatttccat aattctaaac caatatacac ctgttttccc actgtgatgt
      601 gaaggcacaa cttaatttaa cagaaacccc gctgtgctaa atctctcatt aaataccaag
      661 ctagttctgt aatttaaagt tgcagcacca ctattttaac tgaattgcct ttgtattata
      721 aaattaataa gaagttaatg atgcactttg ctgtattcgc tcagattttt gtcagagcaa
      781 caacaacaaa aaagaaagat aaagaagaaa aacatgtcac cagctgacat ctcaaggctt
      841 ctctggtttt aatcattttc ctgaggataa atttcattta aaagattttt taaaaaattt
      901 tttaaacttc cagcataagt aggatcaaac atcgtctttt tact
//
LOCUS       KCKM01002265             545 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35599apa ultra-conserved element locus
            uce-2531, sequence.
ACCESSION   KCKM01002265
VERSION     KCKM01002265.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 545)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 545)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35599apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>545
                     /note="ultra-conserved element locus uce-2531"
BASE COUNT          172 a           75 c          110 g          188 t
ORIGIN      
        1 ttgcacattc tatttgcccc tattccatgc attcaacctg cagagaagaa agacatttaa
       61 agattaccaa ggcaagtttg taatgaagcg gatacctctt tgtctgtcct tgcgccaaca
      121 gcagcagaag ggatactaat tagagggtga attattagct tcccatggtg cactgcaggg
      181 gcattaaaaa tgagtgtagt ttgttgcttt ccttttaggt ggttagtact ggtttaatat
      241 attcttgttt ctaggtgagc agcaggggac agtttttatg attataattg ttgcataatt
      301 actggcctaa ggttgcctat tgttaaataa aaatgctgag atactaatgt tttattgaac
      361 agtacaagta gataaaattg taatatattt ttctgaacaa tgtaagcttg ttatctggca
      421 gcttggtgac aattctaagt tgtcttgtgg ataaagagtc tgactttgca aagactaaaa
      481 ataaaatgtg attttttaaa agacttgaaa tacatttaac ttaaaaagag aagttttaat
      541 ttaat
//
LOCUS       KCKM01002266             764 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35613apa ultra-conserved element locus
            uce-902, sequence.
ACCESSION   KCKM01002266
VERSION     KCKM01002266.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 764)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 764)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..764
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35613apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>764
                     /note="ultra-conserved element locus uce-902"
BASE COUNT          214 a          179 c          169 g          202 t
ORIGIN      
        1 agcaggcgca tggggagaag cagagcagcc ccgctccctg cccaccacag caacttctgc
       61 tgagtttctc tctcagagtc ctcggaattg aaaaaagaac tttataaaat tctccacgac
      121 cagtcgagcg gaacctattt tctctcacaa tgcaattaac ggcaccaaca tttacaaaat
      181 atgattacaa gcactttggt taagtagagg aaagtatatt agatagcagc gaggggttga
      241 tcttaatgtg cattttttcg agagacttgc attttctttg tgcaaataaa gaggccctaa
      301 attctccata ggcactaaaa tcaatgcagt ggaaccatga taacaaacac aggctccact
      361 ttttgctaca tcccccaatt aattaagcct ttcacgggca tgtaattagg aacattagca
      421 agtcataaaa ttgccgtgag tctctaaatt atgtgctggc cctcagcaat ttgtttttaa
      481 ttccttttga agacaatggc actgcggggt cccatagatc ttcatagcag cctactgttt
      541 acttctttat ggctctatga agatctaact gttttctact gctcccagat gcacccgcac
      601 tattttcttg tgcgttttca ttacctgagt tagatttaaa ggggaaaagc atcggcgtgc
      661 cccacgactg ccctgccagc gcggagagag gagcagggat gggaggatga ggagcggagc
      721 gaggatgctc aaccagagtc ccggctgcta atcagcgagc agcc
//
LOCUS       KCKM01002267             576 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35629apa ultra-conserved element locus
            uce-2486, sequence.
ACCESSION   KCKM01002267
VERSION     KCKM01002267.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 576)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 576)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35629apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>576
                     /note="ultra-conserved element locus uce-2486"
BASE COUNT          216 a           99 c           96 g          165 t
ORIGIN      
        1 cttcttcatt ggtagacacc ggatgaagct aacatatctt ctgccaacat taaatttatg
       61 tgactaattt attgagacta agagaaagaa gcatgacctg aaaattaatc aatgacctca
      121 aagtcagtat ccaaaagtgt ggatttaata actactgatt tgaaaaacaa acaagtgaaa
      181 gtgttttaaa aatccaggaa acataaactg aagctgaggc ctttcacaag atcaagacaa
      241 gatagatgac aacctgtaac ggtgtatctt agggctccat gacttcagtt tggaattcgg
      301 atgcttgtat ttgcagtaaa ttaaacaaag ctgaaccaat ctagagaaaa aaaacagcaa
      361 atcaaattat cttctttttg cctaagcgtt atcaatgatg gagcctcttt ctgttgcatc
      421 atgcagagtt acatataggc atttcaaatt atgtaacatc taagcatcct atgtcataat
      481 catcataaat ggtaacaata cagcacaatg aaaactcagt aatatgagaa aagatcaaat
      541 tgctgtgctg ttcttaatat gttcaaccct aatgaa
//
LOCUS       KCKM01002268             468 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35645apa ultra-conserved element locus
            uce-6896, sequence.
ACCESSION   KCKM01002268
VERSION     KCKM01002268.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 468)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 468)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35645apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>468
                     /note="ultra-conserved element locus uce-6896"
BASE COUNT          139 a           90 c           74 g          165 t
ORIGIN      
        1 ggacatatga catagaatga acaagaaagc tgcccagttt aagtgttact ttggcatatt
       61 ctttctccag attgctatat gaagctgtac ataatataaa cacatattct tgtctctagt
      121 tagtcacatt atagttaatg accatatggt cattatggta taagatctac tgtctgttgt
      181 atttatattc ctcaagcata ttgttccttc aacttcacag tgtgttaaac tatttcaaag
      241 ggaaaaaaat cctttccctc ttgtttctgg ttgtcctatc aagtgtaacc ttggaccctt
      301 atagagcaat tagaccagcc tctatcccct cctttgtaat gaggtttctt gcatttctga
      361 gtctataacc ctttagtctt ccctaatggg acatcattat tctgaaagaa acaatgtaaa
      421 tgtaaatgaa tattctcatt aacgagtcac agagaaacct ttagtggt
//
LOCUS       KCKM01002269             542 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35660apa ultra-conserved element locus
            uce-3072, sequence.
ACCESSION   KCKM01002269
VERSION     KCKM01002269.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 542)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 542)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35660apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>542
                     /note="ultra-conserved element locus uce-3072"
BASE COUNT          183 a          103 c           96 g          160 t
ORIGIN      
        1 agttaaaaaa aataagatta gaaactggct tgtatgagcc caactgtgat taaaaaaata
       61 aaccttttat agttaagaca ggtttttttt ctttttgttc tttgactttt ccttgcagag
      121 aaagaggcta tcttcactta atcagagcaa agaaagagtg gctgaggcag aagcagcatc
      181 atatgggtga aggtcaggcc aattttcacc catgtgatgc tgctttatca ctcatggaac
      241 aaagattaag gcctttcttt tctttatcct tttgtgcttt cccccattac tttaacagat
      301 ctgaacaaat cccaggcagt tcatccaaaa gttcctttta gctacattta gttcagatcc
      361 tctaaattcc acataagact tcatgctata ccagcatgaa gaggatataa aacctacatg
      421 tgtagggaga aaaatgttat agaaaaacac aaaaatcact gcagaacatg atgacagcaa
      481 aggccttttc agctgcaaga aactaggcac atccaggaat tggaattatc agcattacga
      541 tt
//
LOCUS       KCKM01002270             678 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35676apa ultra-conserved element locus
            uce-991, sequence.
ACCESSION   KCKM01002270
VERSION     KCKM01002270.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 678)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 678)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..678
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35676apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>678
                     /note="ultra-conserved element locus uce-991"
BASE COUNT          202 a          131 c          134 g          211 t
ORIGIN      
        1 ttgcttggat ttgattgatg cactctcata tttgaagttc actcacagct ttgtgctaga
       61 agaccagggt cactccatct ggtcctctaa tgagactgtg catgaacact tgcagctttg
      121 taggccttgt tttaatcaga catggagaaa cactcctgac tgatagtctt caggatcagg
      181 tctaaacaga aaataacatg ctcgatttgg cctctgaagg tgggttgagc aaatctttgt
      241 gatgtattgg agcatttgct gagtgcaagc gcacgtggta tggttcctat ttctgtcggc
      301 aaatacaaat ttttcactca gcaggcataa tcagagctaa ctcaagagga gaaataacaa
      361 aaactcaaca gcccttagca actcagcatg gcatagaagg atttaagact ttagcatttt
      421 atctctatcg gtatgaaaat gtatgaggaa atctgaactt tggaagtgca aataaacaca
      481 tttaacacat tataaaccag ctattctacc aacgactcct ggatttttta tttttccttt
      541 ttttttcacc ctctccctcc tgaaataata atgctggttc attaatttgg gtttaaactg
      601 aaaacaattc gttgtgacag agttacgtta gaggtgaggg aggaagtgta cacaatctat
      661 tgtaatcacc tctaaact
//
LOCUS       KCKM01002271            1174 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35691apa ultra-conserved element locus
            uce-725, sequence.
ACCESSION   KCKM01002271
VERSION     KCKM01002271.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1174)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1174)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1174
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35691apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1174
                     /note="ultra-conserved element locus uce-725"
BASE COUNT          262 a          299 c          248 g          365 t
ORIGIN      
        1 tggtttcgga gcgcatgctg tcttcagaca ggttgccatc ttcatcattt tcagagtcag
       61 tgctgtcata gatctggtag aacttctcct gcagctggcg cagctgcttc tgcatgtcct
      121 ccagctgctg cttcagctgt ctgcgctcct ctcgcttctg ctctttcctc gctgaaacca
      181 gctgctggaa actctgctgc tgctgctgtg gcagcttttg cttgcgtttg ttttctctgt
      241 aactttctcg gggactcacg gactgcggag ctatttctct ttcgttttca ttgcccctta
      301 atgccacgct gggggaatgg ctcatacccc gaattatatt ctcaacccgg gcgcgtttag
      361 ctctcaggtg ctcgtcgcat aaccgatcca catcaaactg gctcatagtc ggcctgccaa
      421 aaggggaaag acactcttgg gggctgtctc ttgaagagtt gctgcataca tcctcctgat
      481 gtacttctga gcctgtacta gagagaccgc tggcttggaa actgggctcc gtgccaccat
      541 ttttgttcat gttatttttc aacagctggg aaattatggt tgctcctgga aaaggcatca
      601 tggcatcttc atatgagttc gccctcttca gcagcttgcg gagtacattt gacttttccc
      661 catctgcatg ctgcaccact gaatactcga catcctgctc tgaaccttgg ggattcatgg
      721 cactaaaaaa cgttgctctt gcctttgcaa aaaatgcaga tgctgtccct accgtccttt
      781 tcactccaat gtcaactctt cttctcttgg tttgcctgct taagagggct gtgctgtcat
      841 ggtcaggcat cactggactg ttattgtgcc atcttcaaaa gcttgtcagc tgggctcagc
      901 tcaagaatcc tgggaccctg gccaacagaa caaaaggact gatgaatcat tttctttaaa
      961 tttctccaaa tttcctgacc tcaatcctga ataaaatgca aaatgcatag gctctgggat
     1021 ttatggcaca ttacaattat tgcaatttat tatgcactct gcttgaaatg aaacattttt
     1081 aaatatttct gctccactgg tttaagatgg attaagattt aaaaaagcaa aaactgctta
     1141 agcaccagta atatgattct cttgcacaaa tgcc
//
LOCUS       KCKM01002272             789 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35707apa ultra-conserved element locus
            uce-7348, sequence.
ACCESSION   KCKM01002272
VERSION     KCKM01002272.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 789)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 789)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..789
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35707apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>789
                     /note="ultra-conserved element locus uce-7348"
BASE COUNT          188 a          192 c          137 g          272 t
ORIGIN      
        1 cgctccctct ccctctgact tttccctctt ccccttttca acccagcacc tccttccttt
       61 cccaccagga gtgggtccaa ctccaagctc actctaatgt ccagcattcc cttgctcata
      121 catggcttca gcttgccttc accaataaaa actgacattt ctccccctgt cctgcccatt
      181 atttattctt ctcttgtctc tgtcaggtga attttttctt tcagtacctt caactggact
      241 gtccctttcc tgagctggct ggcaattgtt gccctctctg tgttcaccat catcctgtat
      301 ttcatccctc tgagatacat tgtccttgtc tggggtaagt aaagcctttt ttaactgtct
      361 ctgccactta gtaaaaaagg tgtttaaggg gtgacttaca ttgtcggtgc ttttctgtat
      421 ttatggtcct gaagctggcc catgatggaa acagacaggt tagttaaaaa tcacaattgt
      481 gtaaagattt aggcccacct gcaaaatgca tttttcttgg ctgacgctct agacttcatc
      541 atactataaa catgtagcca cgaggattct tcatatatca aagtgtagct ttgtctagat
      601 attactctga tttattttca ccacttatac gcaaacagag gcatttcaat ctatatagtg
      661 catttagaaa aatatgtttt tttactgctg tactttatct tgcagaagtg tatgtaaaca
      721 tagcaacaag aaacctgttt aaagggtcac ctttagtcag acagaaaggt gtgtgtggta
      781 tttggctgg
//
LOCUS       KCKM01002273             884 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35722apa ultra-conserved element locus
            uce-5661, sequence.
ACCESSION   KCKM01002273
VERSION     KCKM01002273.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 884)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 884)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..884
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35722apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>884
                     /note="ultra-conserved element locus uce-5661"
BASE COUNT          258 a          212 c          148 g          266 t
ORIGIN      
        1 cggtctcagt tgagttctgt tttgattttt cagggaccca ttcatctccc aaaactagaa
       61 tccaagatca taaaacacaa acccacacaa gctaaaacca atcagtagct tccccgaatc
      121 cctgcaaagt caaaccattc agtgctgcac agttctgtca ataatagtaa caagtaacac
      181 tacgctcaga ctgtaatttt tcatacccag tgtgctgttg tcatatgatt tactgtgcta
      241 gcactgagag ccattgccca agccttgtct ctgcactcct cctgatttac ttaaatcttt
      301 ttacttttat cagccacagg gaatggggac acttacatgt aacaactgac aatttgaaca
      361 gaaaatacag agaaaagctg tgtaaagcaa gtggctgaga ttatagctgt tgacttctaa
      421 tattatttga cagatgagac tgctgcaatt atcctctgct catgggttcc attactggaa
      481 caagaagcac acaaaataag ggcaatttcc caaacaatat atagggccac ttaactttgt
      541 caagagccat ttctgcaagt gaagtccccc ctggttaaag atacaaggac aatgtgctgg
      601 caacttcact cgagcattta gtgcattcca cattaactgc cttttcagtt gttcttttcc
      661 tgatctcttt gaaccaaata ggatattatt tcttaatata tttgattaac aaataacatt
      721 ttgcttactg ttgttccctc tccttctgga agaaggcatt tcagaaagtt tgtggctcac
      781 aagatcactc tggatttttg catcccttac atcatcctgt cctgtgcccc tttcatctct
      841 ctgcaccagg agggaagacc agcccatcac aaagcttccc actt
//
LOCUS       KCKM01002274             789 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35738apa ultra-conserved element locus
            uce-6121, sequence.
ACCESSION   KCKM01002274
VERSION     KCKM01002274.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 789)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 789)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..789
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35738apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>789
                     /note="ultra-conserved element locus uce-6121"
BASE COUNT          274 a          128 c          143 g          244 t
ORIGIN      
        1 aagccacaaa actaaataaa aagagattat tagctacatt gcagtaagca aacagtaaag
       61 tcttaagtga tcaatacctg acaagagaca tgccacaaac ttcatgtata ggtcaggcac
      121 acacaaagtt ttaaaatcga ctgacttctg gacaaggcac ataaaatgtc actttttatc
      181 tctcagttga tatttttctc agagagtaaa aaaattaaaa aatcacctcc ctcagagatt
      241 tgatcaaaaa gatagtgact cctgatgcaa gtttaagggg gaaaactgca atcaagtgga
      301 aatttttgtc agtaccttaa tctctgattt gtagaaggtt gtgctttggg atatttggta
      361 tgtctgagaa ttgccaccaa agagcccttc tgttctttaa tggctgtact aaatcttaac
      421 aaacgtgagc atgaaaacta ttgtgctgta cttgtaaggc atatatcaaa gttataaaag
      481 cttggaaaag cagttgaatc atgcatgctc tttatggagc tctgatcaga ctgataaagg
      541 cggttcagct tcaataaatg ctttttaagt gaatgttttg gaaagtgaat aggaaattca
      601 aagctcatac tattgccaaa ctgctcccat agcactttga tcactttgtt actgacattt
      661 tgttgaaaat gtcttgtttt tattaaaatg ttggcatctg gggattcaga aagttaacta
      721 tagtcactga aaaaataata tacagtaaaa ctgagtgaca taacttatta agtactttgt
      781 acacatttc
//
LOCUS       KCKM01002275            1198 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35754apa ultra-conserved element locus
            uce-431, sequence.
ACCESSION   KCKM01002275
VERSION     KCKM01002275.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1198)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1198)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1198
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35754apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1198
                     /note="ultra-conserved element locus uce-431"
BASE COUNT          255 a          290 c          278 g          375 t
ORIGIN      
        1 aacctgccct gcgttttgtc ttacgcaaaa gcagttgcac ggtcctgttg ccgcaggaaa
       61 agtcgtagcc ccggcctgac cccacgggtg ttttttgcca gtgtcagggc agttcctctg
      121 gttcttacac cagcagtgac cactgcagat aagaatattc cctctcccgc tcttcagtca
      181 cggttcttgt gtgcgtatta ctactttatc cctggcaaca cttttttttt cacccttgtt
      241 tgcccaagat gcagccagtg tttccttgca gggtggtgga gaggcactgg gacgcttctt
      301 tgagatagtt ggtggcattt tccctggcag tgaactcagg ccttctccca gccccgtccg
      361 cacctgtgtc tttacaaaac ccccattaaa atagctcgat acccgacctc tgggcctgga
      421 atttgagtgt gtttattgca ctgcctaaaa cttgcattgt ttccttgtct aacacactct
      481 tgtaaaaact ttttttcttt tctctttcag tcttggtctt tgtaatgggc aaagaagggg
      541 tccatggagg cggattgaat aagaaggcat actcaatggc aaaatacttg agagactctg
      601 ggttctagtt gctaggcaga ctgttaagta ttaggggaag attgctatta aactttcctg
      661 gcggtgagct ttaaacctta cattctggaa actttattag caatgcaggg tgatggggta
      721 tgaacctgtg tctcctttgt atccctttgt tggtggggaa aggtgttact tttttcttta
      781 attctgttca tttctgtttt gtttccttgt gtactccagc attggttata gtcatgggaa
      841 aggaaggtgt ccatggaggg acactcaaca agaaagcgta tgaactggct ttatacctga
      901 ggaggtctga cgtctaagca gcctctcccc atccacctag cagctgtctg caccaccacc
      961 tccttgtgtt cagtgctacc agactgtaga tggtagtttg tgttttttat ttacccatct
     1021 cctaacgtca taatcccagt tgcccctcgt tcatgtctgt gttaaccact gtatgtaacc
     1081 gcgtccccgt ctggcaccgt ggctgcacca cgctgacgat atgcatgaga ccttgacaaa
     1141 ctctcgggag gggaatacgc caagtgtagg cttcgcttcg tcttagcaat taatgtga
//
LOCUS       KCKM01002276             826 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35770apa ultra-conserved element locus
            uce-4769, sequence.
ACCESSION   KCKM01002276
VERSION     KCKM01002276.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 826)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 826)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..826
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35770apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>826
                     /note="ultra-conserved element locus uce-4769"
BASE COUNT          274 a          127 c          157 g          268 t
ORIGIN      
        1 agatgtactg ggaacaatat tgcaacagct gttcttatca tgaaagaaag tgttctcatc
       61 acggaacagc agaagaaagt actattcctg tagctattta tctgaaggta agatactgaa
      121 tggttttgac taatagattt taaaatgttt aactggcttt atctttcata ttttcagaga
      181 ctacatatag accaattgaa gcatgaacgt ggattgtatt taaacatata caaagaagtg
      241 acagctattc atggttcaag tattaaacag atcatactac caagttttca aaggatttta
      301 gacataatta tctcaagcta aaaaaaccca caaactaatt ttggcaacag ccatgataat
      361 aggtcaccat gtcgtgttct gttcgaaata tttttttgta aatgtctgca ctgaagattt
      421 ctttttgttt gcctttatgt aaatttttta cgtagctatt tttatacact gtaaggcttt
      481 gttctgggag ttgctgttaa tctgatgtat agtgtaatgg ttttatttca attgttttta
      541 tgacaccctt tgagcaggta cgtgtctaat tctggttgtt atcagtgaag cctctgcttt
      601 gtagcaagta cctagagtgt aagattgtct taaaggaaaa tgtcaaactc ctttttcatt
      661 ctctgaaagc gcagtaaaga ggaagggtga tagccgtgac aagaataaat gaacatttga
      721 aaaaacatgc aaagctcaac agccggaaag ggaataaaga gtttccacaa agaagtctgg
      781 ctattgagca aggaacagaa tgaaaaattc ctagcctaca tacaga
//
LOCUS       KCKM01002277             966 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35785apa ultra-conserved element locus
            uce-453, sequence.
ACCESSION   KCKM01002277
VERSION     KCKM01002277.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 966)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 966)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..966
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35785apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>966
                     /note="ultra-conserved element locus uce-453"
BASE COUNT          271 a          186 c          169 g          340 t
ORIGIN      
        1 tgtgatctgt ttcacatctt aacatgtaga acttgccata caaccaaaac tgtgatttat
       61 gtatatatga ctgccataca taaaatagca ttcctagtaa agtctatacc agtgtcaggc
      121 atgtacaaaa atcttactct gactatacct gtttagagtt ggatttcttg gttctctctt
      181 tctttagact gttaacgtgc ttttctttac cacagcgtgt gatggaagtt gttttggaaa
      241 gagatttgaa tgctgtatac agtctgaaag catatttaaa gctgttgcat tcgatttttc
      301 ttttaattcc ttgataccac tgctaatgta aaggacatgg attgaagaga ggatcttctt
      361 ttcctaggca atgtgttatt gatgagctgg catttgccct gtggctctcc ctcaggattg
      421 cttacatcta ttactcacac gcatcgattg gttaatttga taattctatc accaatcagc
      481 ttgtgtctga ccttttgcca tggcaatgat ggcagagtct tcatttttac atcgcagacc
      541 tgctagattg acctttctga ggagaatgtc aagacatccc ttgatcttaa cctgtcacta
      601 aatttgttag aattacactg tcccttaacc ttgatctatt gtatttgtaa tgttcaggat
      661 atgcagtttg tgtagaaata ttcttaaata acttacgtca gtcaaggaat aacattttca
      721 taattaaaaa ttagcttcct attaagaaag tgtacatttt agaaagtttt catgtccgtt
      781 ttccttccat acatctgtgt agttctccct gcacagtcag ctagcccctg aaaagtacct
      841 ttcttttcag taaccgctaa aattagagaa atttctcact acttggagac tggtgaacta
      901 aacatggttc attcagttac cctattaagt aaggactgta ctatagggga aatctaggac
      961 cccaaa
//
LOCUS       KCKM01002278             716 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35801apa ultra-conserved element locus
            uce-6072, sequence.
ACCESSION   KCKM01002278
VERSION     KCKM01002278.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 716)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 716)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35801apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>716
                     /note="ultra-conserved element locus uce-6072"
BASE COUNT          202 a          122 c          132 g          260 t
ORIGIN      
        1 aacccagctg gcctttcaaa tattgctcat cagtcttttt gcttgtctta tttgtctggg
       61 actcagttat tctcctgctt gcttctactg tggctaccat gaccatgaat ttactattaa
      121 atcacagata atatctgtgt tccttttaaa acaaatttac attgtttagg agcagatggc
      181 tatattaaca ctcagtgaga aaaaatgtct tttagaattc gtttagaatt ctgtcagtaa
      241 tcctgaagtg taacattcac agccattgct gcttttgcag cacattaagc ttttatgaaa
      301 gtaaaagtta attacatatg atgactaaac tccagggatc ataattagct gaactgaatg
      361 gctgcacatc agtaattaaa tgtcattcca cttcattgta ctgagccctt aactcaatcc
      421 ttaaaatgtt gtaggtattg gaatctgttg tatccatagc ggaaaatcta aatggataac
      481 attatataaa atacattaag tgaaaaccat aattatgtgt cagttacagc acttatgcat
      541 tattctatga ttctgtgttt atgtagatta acatttctca gaggttgtct atggaaaaga
      601 ctgtaccttg ggcagctctt ccttccgtag ctttaacgtg tgagttgaga ggggtgggga
      661 ggaggagtgt tttggttttc tttatgttgt gcatgaattc tttttctgct ctttct
//
LOCUS       KCKM01002279             832 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35816apa ultra-conserved element locus
            uce-583, sequence.
ACCESSION   KCKM01002279
VERSION     KCKM01002279.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 832)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 832)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..832
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35816apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>832
                     /note="ultra-conserved element locus uce-583"
BASE COUNT          240 a          154 c          157 g          281 t
ORIGIN      
        1 ttgaaatgcg ccaaacagac gttcttctgt ctctaagtgg tgttctggat ccaaactggt
       61 tcataaattg tatatgcaca tctgatgact taaaacatgc aatctgtata tggaaaagtc
      121 tgaaaaattt tatttattat tttgacaaat agttacattt tgttccctct gccatgagtt
      181 agggcacact gtcgttcttt gtttcaagca agtaactgaa gtattagtaa gattttcttt
      241 ccattttctt agaactcccc aaggtctata gttttctttg cggaaacagt tgccattaaa
      301 tatgctgtat gtcaatgcag cagtgaggtg gttaattttg actgaatatt atgctatata
      361 accacttggc atttaacttg aaaaatgact ttctgcttca cctgtcagca gcccagttct
      421 catcaaataa gtgagtgaga aaaattttta aatttcaatt tcctgatgct attagacact
      481 acttcttcca tacttaaaca gtttagcagt gcatgtacat gttttggtat tcatgccatg
      541 catcacacta catgctatta caatagcttt tttgtttaaa gggtaaagag atgcatggat
      601 ctttatcttg gggttaggaa aatgtattgc aggaacatgg ccaatcaggt ttctgaataa
      661 ctttgtaaca tagtaccata accctgatgc agtgtgagga atgtaaaaca ctgggtgcct
      721 acgactccac agaaagaaag ctttctagat ggagacagca cgcaaagcga tgttgcgcta
      781 tgcttcctca gaaacggggc ctcgtggact attcgtctct ttttatcctt tc
//
LOCUS       KCKM01002280             446 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35832apa ultra-conserved element locus
            uce-3921, sequence.
ACCESSION   KCKM01002280
VERSION     KCKM01002280.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 446)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 446)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35832apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>446
                     /note="ultra-conserved element locus uce-3921"
BASE COUNT          139 a           75 c          138 g           94 t
ORIGIN      
        1 atatataaaa aaaaaaataa aataaatgag ctggcttgca acactaggtg gcagaggtgg
       61 gatcttttct gctctgagcg ctgtcctata aggcattgct tgtttaagta cagtcgcatt
      121 tagttggagc tgcaggagag aggcagagag attctctgtg tttacagcca gctcaggcta
      181 cggcgagcat ctaacctggc cccccctttc tccagcactt gaaggggaga gtgtgaggtt
      241 tgggaatctg gcctctgtag gtcagctttt gctgcgactg gattgtcaga gctggtacag
      301 cagagcccag ggggactgaa gggagacacg aatcccattt tctttgagag gagagaaggg
      361 gaaaaaaaaa gaaaagataa attgagagag agagaagcga agagacggag aaaaaggcag
      421 aggaagtgga gcaagtgaga gagaag
//
LOCUS       KCKM01002281             924 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35862apa ultra-conserved element locus
            uce-2082, sequence.
ACCESSION   KCKM01002281
VERSION     KCKM01002281.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 924)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 924)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..924
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35862apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>924
                     /note="ultra-conserved element locus uce-2082"
BASE COUNT          298 a          193 c          147 g          286 t
ORIGIN      
        1 tttaccacag taaactcagt caactgttgc tcttgctttt atattcatag tacttaaata
       61 gcggacttta aaacaaaaaa aactccaatt ggcttttcat acatccaccc tccccaaaaa
      121 taacgcactt gaaaaaccca aatgatatga aaaggcttca aggcctcttt tctccttttc
      181 acagcacttt tttttttatt tctgtttgca gtaatctgcc tttcactttc tcattgctac
      241 agaacaaacg aggaggctca gcactttgaa aagggggctc aatgtgtaat gggtccacta
      301 gaattaattt agttgcacca aatccattga gcagcgaggt ttttttctct tctcaaatca
      361 ttttgaggcg gacgcagccc ccagcctttg taattctagt aaagcactta aagtgcacag
      421 taggtgttca tcaggaccat ctggtcaaaa gcaaaacaag ctgctgattt tgcctttgaa
      481 tagaatgaag caagtgtgaa ttagtctctt caattagcac tattacaacc tgtcaagtgc
      541 atattgtaaa acaggattat tacagtattg gtcaccagtg caattattta ctctctgcct
      601 tttcttgcat ataaaaatgt ccacgtttac tagtttttga taaccgagga tcgtttcctt
      661 aatgatatgc acgtccaaac ccaccaaaat caaattacag gttatgaaac acagtctgtc
      721 aggaatacat taagcttcat aattaataga gaaatagaag agtgcccttc acttattgcc
      781 atttctgttg cataaaaaga aaaagaataa tagttatata cctttatcaa gatgatctct
      841 tcagaacaga tcatctcctc agccagacag gaagatattt tcagcgccta ataaagctat
      901 cacttttgaa caggtacata aaag
//
LOCUS       KCKM01002282             977 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35878apa ultra-conserved element locus
            uce-6252, sequence.
ACCESSION   KCKM01002282
VERSION     KCKM01002282.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 977)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 977)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..977
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35878apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>977
                     /note="ultra-conserved element locus uce-6252"
BASE COUNT          221 a          231 c          205 g          320 t
ORIGIN      
        1 ggcactttct gggaatctct gtccctgcag caattctagt aaaatcaaca gatacagtag
       61 tgaaggtaca tttagttaga ccttttcctg agttttctca tgaattttct cacttgggga
      121 gagagctgta gctcctgttt tacatatctg gaaatggagt gtggggaagt gatatggctg
      181 ttctcaacgt ggttgctggc agcagcacct agagtttctc attaccagct ctctctcttc
      241 tcatgagacc accttccttt tcatagctgc cagttccctc aggacctgaa ggtgccccca
      301 ctggttgacc ctttcatccc tggttgctat gtgccagaag tctcagagct gtcccagtct
      361 tttctcctgc tttctgttgt gattattctc actcctctct gcatacacag atggagctca
      421 atggatccct aatagcatcc tttacttaat taacatgcaa ttagcttaat gaatatttta
      481 acctcattat gtagttactc atctttatct gttgtgggta agtctagtga ccagctctgg
      541 cctgttataa agacaagcca aattagtctg gttcttcaat tatgtttgag gggcctgttt
      601 acatggcttt ttctcccccc cttttctcat cacacttatg aaggaagggc tggggaagaa
      661 agtatctttc tcttcatctt tccctgaaga actacaaatt tccttaaaga tggtacagag
      721 gcagggggtg gtaatattaa attcttgtgg ctgggtgggt ggtgtattcc gctgacttgg
      781 tcaggatgaa ccttatcatt ctacccgtgg gtgaagcttt cttggcagca acatctccca
      841 gctgtgagtc tttcctgtcc tcagcctgct atacggtgtg gtacacacct cacagcatga
      901 caaatgccct tctccatcac gttttttgta ctcaagattt gtacctgagc agaagcaata
      961 tctatgcctg accagca
//
LOCUS       KCKM01002283             166 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35893apa ultra-conserved element locus
            uce-4316, sequence.
ACCESSION   KCKM01002283
VERSION     KCKM01002283.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 166)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 166)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35893apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>166
                     /note="ultra-conserved element locus uce-4316"
BASE COUNT           53 a           30 c           22 g           61 t
ORIGIN      
        1 cttttatatg cctaattaaa ttttagcggt ccctcgctta aataaagatt tattagctgt
       61 taaaattgta gcataattct tctgccacct acacactatc ctttaacata tttacaagca
      121 ggctggctta tccactataa aaaaaagtgg atgatttaat gttgtt
//
LOCUS       KCKM01002284             538 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35909apa ultra-conserved element locus
            uce-5456, sequence.
ACCESSION   KCKM01002284
VERSION     KCKM01002284.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 538)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 538)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..538
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35909apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>538
                     /note="ultra-conserved element locus uce-5456"
BASE COUNT          169 a           97 c          117 g          155 t
ORIGIN      
        1 aaatgtgatg aaaatgcagt acagaaacct gtagtgtgga aggggatctg tcttttaaaa
       61 tcagaattct gtggctttgt ttcttattat ttagtttgag ctcacacaac agaactcttg
      121 cactgaaata ttttctcatt ttaaggaatt aatggctctc caccagccct ttaacatgta
      181 aaatgagtag gttacttgtg tccagtacat ccaaaaagag ccaggataaa ataaacataa
      241 ggagttggat atcttggaaa aaatctgtca tgggtttggg ttaatcatct ccagaagaaa
      301 ttcaacttga tgcctgaaat gtaagacttc ttggagaaag cagtaaagcc tgaggcagtg
      361 ttgatctgaa ggagtgctct ccatgggtca gagctgctct gctggcagag tgcaaaccca
      421 gttcacaaca gcggtacgct gaaaagttgt aaaagactgc aggggcctta ctgtgcacgc
      481 actcaagctt cagttacata gttctagtgt cccagtttct tattataaaa taaaacta
//
LOCUS       KCKM01002285             846 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35925apa ultra-conserved element locus
            uce-816, sequence.
ACCESSION   KCKM01002285
VERSION     KCKM01002285.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 846)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 846)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..846
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35925apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>846
                     /note="ultra-conserved element locus uce-816"
BASE COUNT          284 a          145 c          135 g          282 t
ORIGIN      
        1 attaagcaat tctgttccaa agtttcagta gttgaaaagc cagtgaattt ccccaggttc
       61 tcaaaaccag aaaaaggcaa gttgctctgt attcctcttt aaacaaataa ggttagctac
      121 ccttttgcca ttcacaattc aacattcgca ctaaattaat ttttccaaaa gtaattcaaa
      181 taaaagcttt gctgctgcta cccttttcag agctacaaga ttgaataagg catctgaata
      241 aaattgtgta ttacagcctt ctttaatatt taagcatgac attcattgat ttgtttcttg
      301 ttttctgcaa accttgacaa catgataaaa taaatcataa gaagaaaata tagtggtaac
      361 atcttttatg gacttcacat agtcatcaat ctcaagctgt gagtgaatta tcagtgcagc
      421 aaaaagatct atgttttaag agctccaata gcatactagc tagaggtttt tcacaagcaa
      481 actcaaggcg agtgactgat aagcatcatt attgttttct gagagtctag tttatagtgt
      541 gttgtggagg tgttggcata tatgtttcag aaggaaaggt ttgatcaatt ctaagtagac
      601 atctactaac atataaaaaa tataacaagg gttcctgctg agcagtatta aagtacctat
      661 tgcaccatgt cagcatgaca ggccccatgt tgtgtttttg attatattta atatagaatt
      721 aacctttctt aatgtaacat attgtgcatg caacacgagc gaaaaatatt tatcttgacc
      781 aaagcaaata tcatccttgt ttaggtttta agaaatcctt tattttcaat ttataaaact
      841 tcccca
//
LOCUS       KCKM01002286             578 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35941apa ultra-conserved element locus
            uce-1879, sequence.
ACCESSION   KCKM01002286
VERSION     KCKM01002286.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 578)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 578)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35941apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>578
                     /note="ultra-conserved element locus uce-1879"
BASE COUNT          208 a           91 c          140 g          139 t
ORIGIN      
        1 tgtgagcatc cgtgggtgag ggagtcgcag ctcgggggtg ccatgaccag gacgggcaga
       61 acatctccgg acgggcagag catcccccgt ctggtgccac cacgacgctg caaaagagca
      121 aactttggct gtgctccctt tttcaaaatg caactatgta aaggtcacag aggaggagat
      181 gaaactcgga gttgtaataa ggaaggagaa ataaaaaata atgacagaaa taaattgtca
      241 taagagggga tacagttatg atttattgtg atattctaca aatttggagg tgattaaaag
      301 ccacctaaaa ttcacattaa caagtcacat aaaaatggaa ttaaactagt gggcataatg
      361 tggcagggta taaagaaaaa tcatgacaga aataaattga cagaagaatg atactattca
      421 agttttactc tgtcgcgtca cactgacagg agactagtat tttaatttca gagttgtggt
      481 tgagtttttg gagttcatta aaggcccaca ttaagaatct cataaaagtg agaagaaatt
      541 agtgaccata atgtggcaga ggaaataaag aaacaata
//
LOCUS       KCKM01002287             957 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35955apa ultra-conserved element locus
            uce-1138, sequence.
ACCESSION   KCKM01002287
VERSION     KCKM01002287.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 957)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 957)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..957
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35955apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>957
                     /note="ultra-conserved element locus uce-1138"
BASE COUNT          287 a          191 c          193 g          286 t
ORIGIN      
        1 aaaaattaaa tggctaaact ttgcctcaat atttcgcatt gggattttga gtgacttgat
       61 gattcttttc atacagcact ttccttttct ttccttgatt taaaattaag aggtagcaga
      121 ataggaggcg gcccctgctg agcagttgtt cttgagctgg gctttaaatg aagcatgcag
      181 aatttttaat ttgggaagaa gatgatggag ggtaagcttg aagtaattcc tgaaagatga
      241 ggtgggttat agtggaaaac atgacagcaa acaaacaaaa tctttccaag cccctccagc
      301 cacccacctc catgcgctgt ggtgcttgtc cctgtcctgc actgtactgc tggagcagga
      361 tgactttggt ggctgctcca ggcaataacg tttgaaagtt tcgggtttgg ctactatatg
      421 atcgcagttt cagtagtaaa gggattattc tgagaggcat acaaatgtga ttgtctccca
      481 gcagatggtg cgcactgctt cacctttgag aaaagttaat taagccaagc atattgtgcc
      541 catagagagg aaaatgtaga tgaatattga gcaatcaaac tcagtgtctc cttttttcat
      601 gtctttgcaa tgggacacag aatcccattg aaaaagaatt atgtacagaa tcaaattaat
      661 tcacgtccaa ctttactctc ttcccacgtt ttaacagggg tgcacaccag gcccttcaga
      721 agttttgtcc acaatcaatg ggccacactg ctgtgtccac taaattaaat gaatcagtgc
      781 agaaaaatct cttgtgagat attaaaaggg tgaaagactg tttaattcaa atccttccgt
      841 agtcttttca cagccccttt tacatagtac agtataaatt attaactcac tccttttatc
      901 tcagatcaaa ttacaaaaca gaaacaatta cccccttgtt aatgaatgtg aaagcct
//
LOCUS       KCKM01002288             636 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35971apa ultra-conserved element locus
            uce-1217, sequence.
ACCESSION   KCKM01002288
VERSION     KCKM01002288.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 636)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 636)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35971apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>636
                     /note="ultra-conserved element locus uce-1217"
BASE COUNT          190 a          105 c          141 g          200 t
ORIGIN      
        1 cgccttttcc tggctggtaa cgttgctctg ctgttgggaa tatagagcga gctccaaaag
       61 taatattcag aattatgata cactggagct ctggcgtaat tctttgttga agaagttagg
      121 ggcctaaaat gttaaggctt attgttattc tgagttgata atctctgcct tgctttaata
      181 atttttcctc atgcctggat agcctgcgag ttgcacaata atcactcaca cagctttgta
      241 atcaatgccc aaagtaatag gattccgctg gccaacggca attaataaat ttgtgtcttt
      301 tttaaaacac tagcaagtcg ggcctgaaat acgactgact ggctttcctc atttgcatat
      361 ttattgcagt ggaaaaattc ttgccgaatg attgatgttg agcctgcctc ttgaattcca
      421 aacagcacat tattatgaaa tgaaaaatgc cggccataca gttgattaaa gttgaagaca
      481 gtggaatcgg tgttttttaa gattgtggga gaattaaagg catattttaa tagatgttga
      541 caagaagtga actaacaaaa gcaaagcaaa ggatttgctt gaaaagattt aatcaaacgt
      601 gtttcgtggg ggattaattg ctggggatga ctagtg
//
LOCUS       KCKM01002289             591 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 35987apa ultra-conserved element locus
            uce-703, sequence.
ACCESSION   KCKM01002289
VERSION     KCKM01002289.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 591)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 591)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35987apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>591
                     /note="ultra-conserved element locus uce-703"
BASE COUNT          156 a          139 c          110 g          186 t
ORIGIN      
        1 tgtaatccta acttcatatt tccattgaat tgttcctctc gagctgtgca gacagttgaa
       61 gtatttgagc gcagtcacac cgcgctttgg cgctgcgaag agcctgaagt tagcaatccg
      121 gaggcacagc gtgtgctgct ggcactcctc gggctgcaaa atattactgc acaccttata
      181 tagtgcttgc tttcgaaatt tcctttgcac tttgtttact atatattcca atagtgtaat
      241 attaaacaaa aacagtgtgt cctgtgccag gatgattgat tactacaccg tggcaaggtc
      301 acctcctagg aacaggctga gtgcagtaag ggctgtctga ctcatacagt taacactata
      361 tccgcattgt atgaatgtca ccagcaatcc agtgatttat tgcttggaag gctctgttca
      421 attttttctg cctgaccaaa ttgcacattt tctagaaaaa gaagcaaaaa tatttcagca
      481 cacggattac cccaagtcct catttctccc actaggttca acgagtcttt tcaaagatgc
      541 tgatcatcaa aacctcatat ttttcatttt tttttccacc ctcttctgct a
//
LOCUS       KCKM01002290             859 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36001apa ultra-conserved element locus
            uce-2196, sequence.
ACCESSION   KCKM01002290
VERSION     KCKM01002290.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 859)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 859)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..859
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36001apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>859
                     /note="ultra-conserved element locus uce-2196"
BASE COUNT          294 a          152 c          152 g          261 t
ORIGIN      
        1 aatttgtttt agcaaggaca cagacttcta gctcttagct aggcttgctt ctaacagtct
       61 attatcatat caactgttaa tgagtgtttg ctatagaaaa gtatttctag aaaaaaagac
      121 tatgtgcaac ttttgcctta ctgtccttta agacatggtt ggcaacccta catgaaacag
      181 attttcctaa caaacatttt atcaagggct tctaataact tcagagacaa tcaaaattaa
      241 ctgacagtgc tttgttaaat cagaaaaaag aggttatatg aatggtcatg atcatacagt
      301 tatctcatct tcaccggatt tcaaaaggct gtatctgtat ctagacctat atcaggagtg
      361 agtaggggga gctctaatgc caaacctgtg atgtattcat aaatcagtac tttcagagcc
      421 tgtcatgggc ttcataatga gggtcattat tcaggcagag tgtcaaaact actatcaaag
      481 gaccttctca gaatcacaat cattctgttt cttgttaaat aagcaatgta gtacacaaaa
      541 atggcaaaca agaagcaggt caatttgata cagtatgagg gcacagagac ctctagagta
      601 atttaccctc tgggaattct gatggcttgt gagataaatt atatacacct tcagaaaaga
      661 ttaatggtaa taaaatccca ggaatatttt ctgtgtccat atgtacatat ggcaacttca
      721 gtaacaaaga agacattttc taaagcagaa cacttaaaga aaattattat tagaactgca
      781 agttgctctc tggaaagcca ctaaatctta ttacaaagtt ggcagcattc agtagcaata
      841 ccttatttca atttgctga
//
LOCUS       KCKM01002291            1128 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36017apa ultra-conserved element locus
            uce-2488, sequence.
ACCESSION   KCKM01002291
VERSION     KCKM01002291.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1128)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1128)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1128
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36017apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1128
                     /note="ultra-conserved element locus uce-2488"
BASE COUNT          346 a          253 c          220 g          309 t
ORIGIN      
        1 agagattttc ttccctgagt ctactttcag gtttgctgct atcagtcgag gattagtcag
       61 ctaacatggc atctctgttg acatacattt tctccccaca gctaagacag cttaactact
      121 ttatacacca gaatctgcaa tggttaatca gatactttca aaacagaaaa gtacttgttc
      181 atttatgatt atgcttttag tactcacttg gaatccacag acaaagaaat aagcacccaa
      241 aacccttgtg cctctaagat acactcatat gaaaagcttg aattatggtt agataaataa
      301 atgaaccgaa gaagttactt ggccagattt gcaagtgcac agaatccatt caaaatcttg
      361 catatgtttt cttcttcagc atatacacat tacaaggatt aaacagaaag ggaaacttac
      421 agctttagac acgctttgtg tctcaacacc aactgcagca ctagcttctc ggtaaggatt
      481 accaaggcta cacccccatg cagctgtcag tccctggggc tgtaattcag ctctcctgct
      541 ctcactctat ccatcacatt tacacaaatc cccaaggtgg actgccttct aaatgtcttt
      601 accttgtgca ttatcctggg gcttaacaat ccaatattgg tgcagccaag gataattact
      661 ctccattgat gataaaacac cctgaatcct gtcaggcatg gcaatttgca tcttacagtg
      721 ctgaggatca atagatacaa caaagcagtg aaacctgatt agatgctgct gcctctcagt
      781 ggaaagggaa gagctgattg ttttgcaggg ttgaagaccc ggttaaaagg gaaacagagg
      841 tttcccatta caacacagtc cccaaacctg ctgttcacct agaaactgct gtggggagtt
      901 ggagacttga gaaaaaaaat aggtgaacaa ctagccaggt cttacagact cctggtaaag
      961 gaggagtggt gtttacctgt gtcagcgtgg ctcatgccat ttcaccatca cccaagagaa
     1021 tatagcagat gtgaattgtc tggagctcca agaggttcta cttttaacac gatcttacag
     1081 attcatagta aaaagaggtc aagtagctag ttcacaatca tgcactgc
//
LOCUS       KCKM01002292             597 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36033apa ultra-conserved element locus
            uce-1446, sequence.
ACCESSION   KCKM01002292
VERSION     KCKM01002292.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 597)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 597)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..597
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36033apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>597
                     /note="ultra-conserved element locus uce-1446"
BASE COUNT          166 a          127 c           87 g          217 t
ORIGIN      
        1 tcctttctat acagagatcg ccttcgtgtg atctggttcc ttaatgcaat tactcctgtg
       61 tgtatcttta cactattttc ttagcttcta actactatat ttctgcacag ttttgtatct
      121 gctagcccca gcatttacag cctacgaaaa cctcataaat ctacttcatt tttctaataa
      181 gacatgaaag tccttaattg gccttaatga aatgcactta aagggcaata aacgtgttta
      241 agcccctctt tcagggtgag ctacagtact ctcactctgc tctgttttag cctttgtggt
      301 aattaatcac ttattcatat gtggcacatc agtaacaaga tcaagcaact actgcacaat
      361 tgcatgataa taagctgctc atatatgtgt caagatttag caatcctttt taaagcctaa
      421 tttaaactca ttttacaact aagcaggctg cttctctgaa gtatttctat ccagtatatt
      481 ttttacatat ttctgttgaa atgccatctt tttattttgt ttatagagct ccattcgcct
      541 taaatctact catggcacca gagtgaatta cagcaatgta agagccttac tgttgta
//
LOCUS       KCKM01002293             629 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36049apa ultra-conserved element locus
            uce-4652, sequence.
ACCESSION   KCKM01002293
VERSION     KCKM01002293.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 629)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 629)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..629
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36049apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>629
                     /note="ultra-conserved element locus uce-4652"
BASE COUNT          216 a          117 c          115 g          181 t
ORIGIN      
        1 gagattaagt gcctcataca ttcttggccc gtcctacggt tgggtgtgaa cataaaagag
       61 agggtaggac gatggtaaaa atgtcttgtg atcccaccgt attcaaacaa aaataatctg
      121 ctctaactgg aatttcagaa accagcagat tttcatgtaa actattttgt caatagcatg
      181 gtggtatcct tgctaacctt atttggcacc agtgaataat tagacacaca ggggtgtgac
      241 tccaattgaa ggtgttggca ttgcagcact ctgtgaaaat attaactatg aggttaactc
      301 caattttctc ttctttaatt aaatgcacat ggtactaatg aggtaaccta ctgttccttg
      361 atagcactaa ttagctaaga ggagagtaca ctctcacact gcaatttaaa cctaaaaata
      421 aggttgaaat atgctaattg caggcaattt aaaacagtac aagttgtaga actagtcata
      481 ataagggaaa ctgactgctt tacagctctg cagctgtaac tttggataaa atcaaaacac
      541 gccacacaat tttagaatga tttagcaaag tatccaccag cctcttcaaa aactgttact
      601 taattcacag tagacatcat aaatgaaaa
//
LOCUS       KCKM01002294             793 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36065apa ultra-conserved element locus
            uce-899, sequence.
ACCESSION   KCKM01002294
VERSION     KCKM01002294.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 793)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 793)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..793
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36065apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>793
                     /note="ultra-conserved element locus uce-899"
BASE COUNT          266 a          145 c          167 g          215 t
ORIGIN      
        1 ggcctcccgc tccggtgcaa gaaagcagaa gcagcacggc cacagtttgt tttgctgctg
       61 ccctgtcgtg tgctgaagtt gactgatgtg cagcagaact caactacttc tgggaaggag
      121 gaactgcccg acagcaaact ggagggattc ctatcacgct ctctcagaat ggaacaaaac
      181 aacacaaata gaccttctgc ataatgactc aaaaactgtt aatggctgtc tttagtaaca
      241 tagcaacagc caaacccttg aaaagaggaa gttttcattg agaaagcatt tcattttaaa
      301 cattgaaatt tggtataatg tagagtatga aataagtttt gaaaggaagc tgatgattaa
      361 gaagaaatgc agtgggcatt taataaatgg aggaaccgca agataattaa ctggcatgca
      421 taaagattca tgctttatac caaaatttta attttgcaca taaatgtgcc tgatgtaggc
      481 agcatttaat cacctagctg acaggagtaa ctactttcat ttaaccttga ctgaagatca
      541 tgaattctaa caggtttaat tggatacatc atttaacaga atgaacagag caaatttttc
      601 tcaattcata ggttctgatt gacatgcacc agcaataagg cgttgcacaa ttaaagctga
      661 tctgtattcc tggcctgggc agcaattgcc atagtgatgt gacactgttt gatcactgtg
      721 gcactgaaac tatactgaat ttccccttgt tttgaaaagg gcaatgcttt aaaaaaagag
      781 agagagagaa aaa
//
LOCUS       KCKM01002295             955 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36081apa ultra-conserved element locus
            uce-4486, sequence.
ACCESSION   KCKM01002295
VERSION     KCKM01002295.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 955)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 955)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..955
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36081apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>955
                     /note="ultra-conserved element locus uce-4486"
BASE COUNT          246 a          199 c          212 g          298 t
ORIGIN      
        1 gattagtgca atgtgggctc atttcccact cccctcacca ggcccaccaa aaaaatacca
       61 gcactttttc tttgtgagaa gtagcagttg cttttttttc cttatatgtt tctgtagaca
      121 gttcttggat tcttgaacga ttaagtagaa ttaatgtctc ttgaatgttg aggcactgga
      181 aaaaatatcg aattctctgt catagggaac gtggtgcaga actgctgcca tggacctctg
      241 gagggagaga tgggagctgt ttcggcaggc ttgggtttct ctctgtttat gtgaaacgga
      301 cattggcata tcttgcctgg acttttcctg tggggttcat gtggtaggca gggtggggaa
      361 tagttgtctg agccatacca aggtcagcct gctagagctg acagtttctg tctctgtaca
      421 aagaaaagaa tcaatacttt tggactacgg ctgtgccctc agtgtaaaac aacaaacatg
      481 cagcgtctga catgtttcta ggtgatttgt ggcagaacct cttgtctgat ctgtatccag
      541 gagctgctgt gttactgctc tgcgcttttc ttctctctct tgcccccccc agctctgtga
      601 tgtctaatac tttactcagg tacagaggcg tgtgttctac cctacagcta cttgtcactc
      661 aataaatcac acctacaagc acagtctgca catagtgatc tgggctttaa caaaggatca
      721 gagggacaaa gtgcaggcaa gatactgtaa ttatagcaaa aataaaacat tcagtgggtt
      781 gtagcaaaga caggggctct caggagctaa taaaatgtta ttagaattgc agttttgttt
      841 cagtccttca acatccattt ttaacaaatt ttccatcttg gatttctcct gttcattgtc
      901 tttccaagct gaaacacaaa cttcagggag atgacctatt ttatataagt atttg
//
LOCUS       KCKM01002296             604 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36095apa ultra-conserved element locus
            uce-7873, sequence.
ACCESSION   KCKM01002296
VERSION     KCKM01002296.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 604)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 604)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..604
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36095apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>604
                     /note="ultra-conserved element locus uce-7873"
BASE COUNT          190 a          119 c          119 g          176 t
ORIGIN      
        1 tttgtactga gaacccagta gtattcttaa tattcaaatt tcttagaaga atggcctaaa
       61 atttgacaca aaggaaaaat aaggaaaaaa atgacactct aaaatgaacg aactgcccat
      121 tcatatgagt gggaattttg tgccaactgc aaggataacc tatgcccatt ataaatccat
      181 aagttttgtt tcattttgca cgtgtattta atccatctgt aaattgttca ttggatagca
      241 caagacgatg ctctctcggg aactgtaagg tatgtgtatt caacagtgga gaataaacac
      301 aagattttat tacaaaatgc cactgctgct cctggcatga gtaatttgtg cacctgcatt
      361 tttaaaatgt ttcaaagttt ttcccctttg tgaattcagc ggcaacacac attatcttcc
      421 aggctgccac aacacagtat ttgcagactg ggtcacgtca gcccttgtta tccagcagcc
      481 actgttttct gagcaaatag caactgaaaa tgacaatggt tcgctccaga cagggagaat
      541 aagacactgt ttccttatgg cctagtaacg cgtgtctgca agatgagcag gagacatatg
      601 tggg
//
LOCUS       KCKM01002297             453 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36110apa ultra-conserved element locus
            uce-1508, sequence.
ACCESSION   KCKM01002297
VERSION     KCKM01002297.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 453)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 453)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36110apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>453
                     /note="ultra-conserved element locus uce-1508"
BASE COUNT          141 a           79 c           89 g          144 t
ORIGIN      
        1 aaaccaaact aaaatcctca cagcagcaca gcactgaact aatctgacat cagcttcttc
       61 tcctgaaatg ttttaagcag caagacaatg tcctatgttt tttggcaatc agtagatcag
      121 atagaggagt ctagcaatac aacaaggatg tgtaatctga catgattaga caaggctctt
      181 taggaacaga acattcataa ttgagacaaa gaaaaagtat taataacact ttcctaacac
      241 ggcagttagc cattttatat ttcctttctt taatcttagt gtttttcaac aaatcatggg
      301 atttaatagc gtgttttggc agattagagg atttatggcc cagatgtttt ttgttctaaa
      361 aatggattag ggtgtaaagt ttgctggaat ccatggaaca tgttgaggca agccggtcat
      421 tttgtgtgtg attagtgcct gccttctgtc tca
//
LOCUS       KCKM01002298             299 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36125apa ultra-conserved element locus
            uce-7566, sequence.
ACCESSION   KCKM01002298
VERSION     KCKM01002298.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 299)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 299)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36125apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>299
                     /note="ultra-conserved element locus uce-7566"
BASE COUNT           87 a           62 c           61 g           89 t
ORIGIN      
        1 gaaaggcgag aggctttgag aattccctgt ttcttttcct tgcctccttc tttttctctt
       61 ccacccagaa atcacagttt gagagaattc ccccctgctc ctcccgttgg aaagaaagac
      121 agagaagaca ttcttgacat tctttgcaga gaaaaggggt taaatgtctg aatttggggg
      181 tcaccatgtt atacaaattg caatctaatc gtttttacaa gaacacacgt gtgctaagaa
      241 aaggagccat ggacaagaaa gaaaagggga cagacaactt tttttgtcct atctttttt
//
LOCUS       KCKM01002299             749 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36141apa ultra-conserved element locus
            uce-3931, sequence.
ACCESSION   KCKM01002299
VERSION     KCKM01002299.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 749)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 749)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..749
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36141apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>749
                     /note="ultra-conserved element locus uce-3931"
BASE COUNT          214 a          154 c          140 g          241 t
ORIGIN      
        1 aacaaggatc ataaaaccag tgccaaagga ataatggaag gcaaaaagga cagtgagcat
       61 tttaggtcca aatacctgtt gccttaaccg aaaacactct gaaaaagatt gctgaattca
      121 agggtgctgc cttatgcggt agaaatcact gctgaggtaa ctgctaacca gaagcaaagg
      181 atggactcag ctgtgttgtg cctctctctg aaaatttagt gagtgcctac ttgctgctgt
      241 gctgttgctg ttctttcttt tagtgctttc ttgacacatg taggagagga taaaagccta
      301 atgggtgcga gtgtcagcac aatataaatt actgcaagga gaaacttgat gcattgcttg
      361 ggatctgaaa gaggaatgtc caccattgtt tgtgattatg gatcacatca caatctaata
      421 gcaattttta tttaatcaat aatttccatg ctgaacagac agccctgtta cagagaatcg
      481 acaagcaggt actgatagcg acaaggcttg ttattaatct ttaccctgcc aacatatcaa
      541 ccaaagtact gtaaaaaagc actaccaaga tggatttaga aggtctttct tttttctttc
      601 cgtttttctt tcttttttct ttctcccttt cttcctttgc ctttcttttc tttttagctg
      661 cacagtccca ctacccttct ccctttccag gtatgtaatg tttcatacac tttatattcc
      721 aagtttattt gaaaaacctc cgacttgaa
//
LOCUS       KCKM01002300             521 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36157apa ultra-conserved element locus
            uce-3032, sequence.
ACCESSION   KCKM01002300
VERSION     KCKM01002300.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 521)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 521)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..521
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36157apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>521
                     /note="ultra-conserved element locus uce-3032"
BASE COUNT          164 a           92 c           83 g          182 t
ORIGIN      
        1 cagaaatcct cactatagat tactatccag tttcttctgc cttttctagc aaatacttct
       61 catctttgac tttgaaaccc aacagtttaa accgggttct tgtttcagtg gactaatccc
      121 ctttcataaa tcatgttcaa gtgctgaaat aatttgcaca tcgtttaaag agtatttgct
      181 ttgaaacatt cacctcgagc ccttttgtat atcctttctc tctaaagatt tgtagtattt
      241 gttttgttct ctgaggtata aaagacctgg gtaaacttta ttcctgttgt ttcaagatta
      301 gtgaaataaa atgcatgttt attcaactgg gactgaaagg agctttagta aagacaatca
      361 tacatatgac ccatgggaat gttgtaatac aaaaagtctg tcttaaaatc tctttaggtt
      421 tgttcaaaat accattgaag gacttaagtt taaggaaaaa aaaaacaggg ttgcacatcc
      481 atatttcttc tttgtttcaa agaagagaga gacaccatat a
//
LOCUS       KCKM01002301             818 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36173apa ultra-conserved element locus
            uce-5097, sequence.
ACCESSION   KCKM01002301
VERSION     KCKM01002301.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 818)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 818)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..818
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36173apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>818
                     /note="ultra-conserved element locus uce-5097"
BASE COUNT          254 a          140 c          171 g          253 t
ORIGIN      
        1 ttgaggggac gtaaattcag caacatatgc ttgatcagct gtcttgtttt ctcctaagca
       61 gtgaatttac agcatacaca tgctctgagg caactactct cttatcgttt atggtatcta
      121 aacttttttc ctgataaatc taattcagat agattgacag ttcaaacaat gtgttttctg
      181 ggtctcagga ggaaacgtat ggctcacttt tggcttagta acttacagag attaggtttt
      241 gcataatgta aatctgaggc gggtgatact ttgtctgaaa cactgtgaat gcaattagtg
      301 agataaatac agagctaaat taattttctc tgaaaagagg caatctgatt gccatgcaga
      361 aagcaccttt atttgccgta ctggtggttc ataatgtggt tagcaatgca cagagtggcg
      421 ttttgatttg cagctttaaa gaattctgag atgaataaaa catggaatta attgccaaag
      481 aacctttgcc agactagatg aggtctactc cgctgaataa aaattataat ctatgacaca
      541 ctctgtttca ctcccaaaat aaattatgtc aatgccagaa aaggttaaat agcacttcaa
      601 ataatttgca gcgccataag tcctcttcag atgcgggttg agggtaaaca cacattcgtg
      661 tgtcctatca tcccacagca gggctgatta gaatggagct ataaaaaata tccaactcca
      721 tgctttgtat taataaattt ggaccagtgt cacagctgat tttgaagtag aagctgttgg
      781 aagggagaat aggcaaattt ggatgttctg atatgtgg
//
LOCUS       KCKM01002302            1277 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36189apa ultra-conserved element locus
            uce-558, sequence.
ACCESSION   KCKM01002302
VERSION     KCKM01002302.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1277)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1277)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1277
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36189apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1277
                     /note="ultra-conserved element locus uce-558"
BASE COUNT          429 a          223 c          205 g          420 t
ORIGIN      
        1 ggaatattat tttccattca acataatcct gtgttctgaa agagcagcta ttcatataac
       61 atgcccagga atattgtagt ctttgtttct gcattttcaa aggctaatcc tacctacatt
      121 tgagctactt aggtatatca atggcaagtt actatttggc aaatgttcca aatatgacaa
      181 gagctattaa ctgcaaagca aaaaccagaa tctataactc tttgtaccat ctactgttct
      241 ttagcatttc aagtaattag cagcttattc caaaaacatt tgaatagtta acagatttga
      301 tatctatggt taatcctcat taaaattacg attacatgat ataattacat gtaaataaga
      361 aaaatgaatt caataaaact cttacccttt tcaatgttgg gcactaggtt gggaatcata
      421 cagtacgtac aattagattt acactgctaa gctaaaaata ttggtgaaga tctaaaaatg
      481 acgaacagtg ccttttaaat taatgtctta ttagttgagt gaagtacact gacaaagaat
      541 aatttatgct tattcaaact gctctcgaca tcttcaggtg tttccaaatg agctcacaga
      601 agagtgatta aatgcatctg ataacaagcc acacattgct gaaattactt accgcctcat
      661 tttatgatta attaaacatg tagattaaag ttgcaaaaga atttagatta atgagcaagt
      721 taagtcttgc tgatataagt gaattgggaa ttggatgctc tgtggaactt tataaacatg
      781 cattttataa tgagtaagac aaggctacat gttgaatcct ggccacaagg gcctttgacg
      841 atgcagtctt ttttaacatg gtttgacagc tttcaaataa cattctacta tagactttaa
      901 actttgtgca ttgctgtaaa acatgagact acataactca tgtattagga gtacgattat
      961 ttcaaagctc tccaaggtaa tgaccccctg tagcagcagc tgttcagaaa aattacaagc
     1021 tcaattgtta ttttaatcag agagagttta gtatttaaaa gcagttatgc aactagtaaa
     1081 attatatgac actccatcag tagccttata gcatccttca tagtcctgtt cctctccaat
     1141 tcccctgccc aaattccttg gtcttattag taaaacaggg tgctcagtca ttcatgaaaa
     1201 attcaaagcc atttattaag tctggtttct gtgcaaggca aggtaacgtt taaatttatg
     1261 atcattctta tcagctc
//
LOCUS       KCKM01002303             538 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36204apa ultra-conserved element locus
            uce-6098, sequence.
ACCESSION   KCKM01002303
VERSION     KCKM01002303.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 538)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 538)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..538
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36204apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>538
                     /note="ultra-conserved element locus uce-6098"
BASE COUNT          145 a          149 c          111 g          133 t
ORIGIN      
        1 gggggggagg aacaaaacaa cccccaaaat aaacaaacaa acaacaatct cgcgcacaat
       61 caccataaag tgaaattcct ttctgcacac ccacaactta tagctctgtc tgctgcctgg
      121 gggattttaa tcttgcaaag agaaaggggg gctccctgcg caaaattacg ccttctcctc
      181 tcatttgtta gctgattcca tcaaaaagtt cgctatttat aggctacaca cacgaacctg
      241 gagtaataca aaccctcccg tgttgttccc ctcgcaaagt ggccggtcct gaagcgtctg
      301 atcgggtttg tgtgtgtgtg cgtgagtgag agagacacac agagagcgct accatcaaaa
      361 aggggaaaga agagctcaag ctgagagact taaagagctg ctctgccacc agccatgtga
      421 gtacctaaca atgatcacct tttgcacaga tggtcagcga tcaggcacgg acactttctg
      481 tccttttctt cctccctccc ctttcttatt ttttttctcc tgtctccctc ccacccac
//
LOCUS       KCKM01002304             922 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36219apa ultra-conserved element locus
            uce-7131, sequence.
ACCESSION   KCKM01002304
VERSION     KCKM01002304.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 922)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 922)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..922
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36219apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>922
                     /note="ultra-conserved element locus uce-7131"
BASE COUNT          241 a          175 c          155 g          351 t
ORIGIN      
        1 aataatacag tgtcccattg ctctggacag ggctaattgc tgtattgctt cagctggtct
       61 agatgaggtc agaccatatc gtggccatgt agcagattca cagtctttaa gatttacttt
      121 tttttttcta caccttcatg taattgcagt gttggaaata ctctctcaaa cagctgggcg
      181 ctatttaaaa gtcatctcaa ggtttagtta aaccttacag tttcaacttt acgttcatga
      241 atgcagtact gttgtctgtc atggggtggc taagatttat tgacttctgt gatctgagtt
      301 atgtgattct gaacccaaca gtagagtgag aaatggtatt tcatacaact cactgttacc
      361 tggtttgtaa tccatgtctc tttttttttc cctctctttt ttttcttctt aatctgcaga
      421 tttacatgaa tgctgtatgg catggctggg ccattcctat gttcttattt ttagcaattt
      481 tgaggttgtc cctaaattac ctcatagcca ggtatttaca taaataatag attatgctct
      541 tgtaatgctt tgcttgaaag atgttttaat attcttgcac tcagctataa actgttacct
      601 tttctaatgt tgtgagttaa attcatcaaa cttgaatatc cttaatgtcg ttgctcaatt
      661 tctataactt ttgactattc taaggaatta tctttgtttc ctctgacctg agtcattata
      721 agtgatgctg catgttctca gacaaatccc tcaacactta aacttctaaa ataaaaacat
      781 tatgcagtat tcagagaggt tggagaacat tatcttaaat attgaagcct gttgcttttc
      841 cctggatgaa attctcatct aggcctaaaa ttacagtttt gcctttggcc tgtagcctac
      901 ttaatccaaa gtatcttccc tt
//
LOCUS       KCKM01002305            1033 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36234apa ultra-conserved element locus
            uce-3224, sequence.
ACCESSION   KCKM01002305
VERSION     KCKM01002305.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1033)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1033)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1033
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36234apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1033
                     /note="ultra-conserved element locus uce-3224"
BASE COUNT          295 a          207 c          200 g          331 t
ORIGIN      
        1 tgactctctg aactaaacag ctttgccagc tgctctagaa aatgaccact caagttctgc
       61 aacatgtgga actaccgaaa tgagccctgt gaggataaca tatgcacagt gcatctcgtg
      121 actcagtcct gggtattcag ctgacagaaa tgggtaaatg agcttagctg ttcgggctgg
      181 ctttgttgta cttgaacact tacatatctg gttgaaaaca gaacagtttt gggctttaaa
      241 gtaatacttg ctttgcgatg aatttctgta aaatcaacag cagctgattt agagtaacag
      301 cccctcctga taggaacatc agtgaacaat cagtcgtgag cacattgaca agccaaggct
      361 tcaactgata actttagttt agtttcacgg tatttatatg tcgacggttt taaaaatgta
      421 cttagcttac ctagctgcca tttttaatat tttccagtct tcttgaaaaa aagttattga
      481 tttgacctcc tacctaaaat aatgttcttt agatctaaag ctggttagac acattatctg
      541 actgagttta ctgaagcaaa aacattccat aaccttaacc ttttccctga ccccctgctt
      601 ttaacaactg ccgacatagt tttatgctgt tatgtgacca tgctcggatg aaatctgtca
      661 aacagctcct tgagttatta ggctgtctga gtctgacctt tctgcaatca aagatatatg
      721 acttaagggc tcagatttgc catggcaacc ggtccaattt gctgccgtga gaaaaggtct
      781 aattgttgca gaaatttaat gatctagagc gacatcaggg ctgtgagatt ttatgaactg
      841 tttacaccgt aattttcatt ttgttaatgc agtctttttt tgtaacccat tcatggctag
      901 agcataagtg gctgttttta tttaaaatag cattgcatgc tataaaagat ggctcagtgg
      961 aaatatgcca ctagttggga atgtattaac acacggtcgt acataatttc agccacccct
     1021 gcctactttt cgt
//
LOCUS       KCKM01002306             892 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36249apa ultra-conserved element locus
            uce-4584, sequence.
ACCESSION   KCKM01002306
VERSION     KCKM01002306.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 892)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 892)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..892
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36249apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>892
                     /note="ultra-conserved element locus uce-4584"
BASE COUNT          310 a          160 c          140 g          282 t
ORIGIN      
        1 gccactttca cctacacata tcttcccacc tctaggcacc tgaaccaaat cctgtagaaa
       61 ggacaaggct gcaaggtgct aaatacctgg atcttaacta ataccctggg gaataatgat
      121 aagtgatgca ttcacggaag gaaattcttt aaagctcagt gattgtaaaa tggagaatat
      181 attaatgttt cagtatgttt attaaatact taacaatgta attttttaga aggctatcct
      241 agcattgcta tctttttgca tgcacttagt taccatttta aacaactaca aaacagagac
      301 atgtggtact gaagattttc taagcatctc aaagcaatat atgtgtgtga tatatgacat
      361 ccttccataa atcctaaatt tacacagtat gctaatgctt gattccataa tttcttttaa
      421 aaatgattat accctgctgc taagagcaaa ggcatactaa aatcagtttt ctatgctttt
      481 ccaacaatga aatgcaagcc agcacaccac ataaccaata cttaccatat gttagaagat
      541 aatccagtag gcttcagaca ctgacatgat ttgcttaaat aaaaatccct tttttaaggc
      601 agtaacaaca gcctaccatt tttattattc ctttagtgac ctactataga aagactaata
      661 ttaaatataa atattgttat tgtaaatcag tctagtctat tttcattgcc tttaatgtag
      721 gagagctctg acttagttgc taggctagag gaataagctg caattaagtc attgggttgt
      781 tcgaagaaat tttcaaaacc agaaaatatt caccagatca aaagaaacct aaagagcagt
      841 ttcaagattt ctctggtata ttggagatga gatgaaacac ttcaatttgg ta
//
LOCUS       KCKM01002307             831 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36265apa ultra-conserved element locus
            uce-2261, sequence.
ACCESSION   KCKM01002307
VERSION     KCKM01002307.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 831)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 831)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..831
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36265apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>831
                     /note="ultra-conserved element locus uce-2261"
BASE COUNT          266 a          153 c          191 g          221 t
ORIGIN      
        1 tttggtagtg tgtgccttca aaaggcaacc caggctgaaa gaggaatcgg aaaaaaactt
       61 ttccatgtgg ctacaacatt tattatttaa cttcagcaga tggatccacc ttaagaaagg
      121 tccaaggagc gagatggaaa ccaaatacag tcagaggaag ttggggatgt gggtgtcagg
      181 ttgtcagtaa tctgacagct atggtaacta ccctctaatc cagcggctcc agccacgctc
      241 tcgcctgaca cggcacggac tgactgacag ctgaagagcg ggcacttttt acaggcacaa
      301 gtgacatcca gtctattaag gctgacaagc acaaagcaga gatttgccct gaatggtttg
      361 gtactgaagc ctagtaaagg ggttatttga aaggtcttag agaaagtgtc agactcaagc
      421 tcagatgata acaatattgt aatgatagca ctggacaatg aagtgctatg attgcccata
      481 caggccagga agattgcatg tggatatcga gctctacaag ccagtttaca gcagcagatt
      541 ctcaaaagca aacatgcagc agctcaaaga gtcctcattg tcagaatttt aaagatattt
      601 tttttcactg tgtgataatt gacttgtgcc tttgttattt ttgctctagt gtctaagaaa
      661 aaaaaatagc agtaggagca attactgcag atccccatag aagatacaaa tgatgaaatg
      721 gcattctgct caatctgtgg cttgtaggtt aaaacaagat gtgcaaacta atgttcttag
      781 tgttgaaaat atacagtaat aatggaaatg catgttctta gtccaaatgt t
//
LOCUS       KCKM01002308             738 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36281apa ultra-conserved element locus
            uce-3509, sequence.
ACCESSION   KCKM01002308
VERSION     KCKM01002308.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 738)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 738)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..738
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36281apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>738
                     /note="ultra-conserved element locus uce-3509"
BASE COUNT          264 a          146 c          140 g          188 t
ORIGIN      
        1 ttagcttatt tgcaatgata gaccatgtat catttttatt aacatgtcaa tgatgttttc
       61 actctctaaa gctacaaaat aatttaagca ttggagaaat tctactttga cactgtcaaa
      121 aagagatact tcacacatca atccacattc ctccttgaaa ttctatgaat catgtccatt
      181 tttaaacaaa cgtgatcaca aaacagatgt tgggaacctt tttgcaacga ctcggaagca
      241 ttagtttgat tagtagccta tctcatcctc tgaacgcatc gcgtgtgggt ccctgctgca
      301 actctccatg ctttgatagc cctgtacaat gctgcttgaa ctccatgcca caaggcaaca
      361 ctgtaaagaa gctgaaagca aagagaacgc tgaaagagaa tcatcctgac tgaaagagtc
      421 aaactgccaa aaaaatatct gtagtcaatg aaggtgacat ttgacagggg cacacaccaa
      481 gacttgtgct gttcaacata ttttaaaagt gctctagagt ggactattag caacaaacaa
      541 catttatcag catacgaagg tgttcaggag agtcaaaaaa tgaatagcag aacgatgctg
      601 aagagactta cacctagtga ctgaggaata aaagagcaga gggagtttaa gttaaaaaaa
      661 gtgaagtgac aaatggaagg gtcaagagac agagacttca gtatccaaac acaattacag
      721 gctccaaatt acccaaca
//
LOCUS       KCKM01002309             575 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36297apa ultra-conserved element locus
            uce-3716, sequence.
ACCESSION   KCKM01002309
VERSION     KCKM01002309.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 575)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 575)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36297apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>575
                     /note="ultra-conserved element locus uce-3716"
BASE COUNT          181 a          117 c          121 g          156 t
ORIGIN      
        1 tgtggcaaaa cagttacagg gcagaggagg ggaggatggg tttagtttcg tttggaggca
       61 acatgagaga aagctcaaac agcacacgca cgcacacacc ctctgctcca caccctcacc
      121 ccccagaaaa aaaaaattca tcacaccgat tttttcatgg tctggcagtc aagtgataaa
      181 attatcagat gagggtccca ttctcctttc ccgcagtcac ttttgccaag tgcaccacgt
      241 ctgaaataat gaagcagatt tgattaaatt ttcgctggct gaagcagcca cgctaatttg
      301 gagatgggct tattagttta atgaccgatc cgaataatca gaattcatta gcattagtgc
      361 cactattgtc agctcaacat tagccctggg ctgcagtaca caaagatgca tagttatata
      421 tttatataga gagaggctgt atttatacac agtgaaagag agagggagaa agcaatagaa
      481 gaactgtaca tgtgcattta cattttatac tcttaccctt tactgtgtat ctttgtccgt
      541 taaaagaaaa atcaaattat aacgaggctt tgttg
//
LOCUS       KCKM01002310             980 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36313apa ultra-conserved element locus
            uce-1556, sequence.
ACCESSION   KCKM01002310
VERSION     KCKM01002310.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 980)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 980)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..980
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36313apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>980
                     /note="ultra-conserved element locus uce-1556"
BASE COUNT          309 a          211 c          179 g          281 t
ORIGIN      
        1 gaaggaaaaa aaaaaaaacc aataagttca gtgtaagcaa gtcagagcaa cctttaaaat
       61 aataagacaa atcaatttat ttcacaaatg tctttatttc caaatgccat tgtttggtct
      121 tttctgctgt cactgcccac agcacttgag aaaacttagc tcttagtcat ttaggtgcag
      181 cagaaattat catgtaacag ccatgtgcaa agattataca ttcacctcag tgaagatctg
      241 ctgtaacaac cttgtcctat ggggtaaaaa gtgtttagga ggcgggggaa ggcaagaaag
      301 acaagtttta aatacggaca gaaaagccct actttattgc tatatacaat gaaaagtaat
      361 tacagagaaa aatgaaagct gtttcttgct gttagcagga agaataaggg aattctgttc
      421 ctttttaaag cttggagtcc attttgatat aattggttcc agaattattt atgacattaa
      481 ttgctgcatt atcgactgcc tgtcagctct tctggcagtt agtccatctt tcttaccaca
      541 gaaagccagc tcagcccaaa ctagactgac aagctaatta tacccatctt ccccttcaat
      601 gacaaatgct gctcatcgga aacctttcta gaaataagct ttcattcttt cccctttttc
      661 ctgagccaga cacaactgat atctcaaggt acagatcaca gctgaaactc tgctcacagg
      721 gctattagct ctgaacatct cacttgagcc aaaaaaccta agcatcttat gttatcaaac
      781 tgtatgtcat tccctgatgc tagttttcag tggatgtgca ctgggccgta gctgtcactc
      841 aaagccgtgg cagacagagc aaacctgact gcattagctg ggcccttctt aacagctgag
      901 gcaggcctct gacagtcatt ccaaggctca gaaaaaagac tttgtagttc cctcatgtaa
      961 acttccagaa tcaatatttt
//
LOCUS       KCKM01002311             929 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36329apa ultra-conserved element locus
            uce-6558, sequence.
ACCESSION   KCKM01002311
VERSION     KCKM01002311.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 929)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 929)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..929
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36329apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>929
                     /note="ultra-conserved element locus uce-6558"
BASE COUNT          300 a          189 c          167 g          273 t
ORIGIN      
        1 agtgtgccca gccagagggg aggggtagga gagagtctaa ctcacaccaa tgtagattcc
       61 ctctagattc ccctctttaa cgggcctgac cttttctaaa agggttacat cacacacaga
      121 cctcagctat taccccctga acactatttt ctttgctctg gaaacctcac tgaaacaatc
      181 ccgtgacaaa cctcgatttg taaaccaccc gcgagcagga ctgggccact tacaagtccc
      241 tgccaagagt gaagagggaa gtcatgtccc tctggcctaa attatttctt ttaatagatt
      301 cacaatctgg gaaggagcca gagatcctaa acaaagataa ggtgtaaaga ggtggacaag
      361 acgttaaaga aataaaatcc atatcagggc aataatggtc ataaagcaat aaagtggatg
      421 cataatagtt cctggacttt taatttgtga ctaatttgtt gcacaatgag gttgcaattt
      481 tctaattgtg attgccattt taattttact catggctgtg caactaacaa tgtatagtct
      541 agtaattaaa attaattgta ccttcacctg catatttcta ttaggctgtt aaatttagtt
      601 ggtaggctca atgattttgt tctctgagag acgccgaatt catttcagcg agcccaatta
      661 tgttacactc tgtaattcct gtatgaaaaa caagcatttt actttgatat gaagagctgc
      721 ttcaacccca tttttaaaat tgcatattca acaccagaat atagactgac aggagataca
      781 tataagtggt accttttctt tttaaaaata gtctgcttgt gagatacctc ttagaaaact
      841 aacaattaca gtccctagga ataaatccaa caaaaactca gctagatagt caccattcaa
      901 tcaatttcat gaacaattaa cagatgtct
//
LOCUS       KCKM01002312             900 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36345apa ultra-conserved element locus
            uce-7208, sequence.
ACCESSION   KCKM01002312
VERSION     KCKM01002312.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 900)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 900)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..900
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36345apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>900
                     /note="ultra-conserved element locus uce-7208"
BASE COUNT          284 a          160 c          170 g          286 t
ORIGIN      
        1 atgtaatttc catagttata aaacaacttg agaaaatgta ctgtaacaat atgatgtatg
       61 ctaggattga ttaccccaaa aatcctttca agaggaaaaa cagagaggcg ggaagagaaa
      121 gaatgtttct atccaagctt cacatcctga aggtttagct tctgtggaga aaaaaaatcc
      181 ctcacattca gtttttacgt cgggtggtca ctccatttgt gtattcatta tgcacattaa
      241 gcagtcaaat ataacccttc cagtaaatat taatagttta atttgttctg ctgaacgaga
      301 gacaactatc agaaatagca ataaaagtca cataatgaaa taagaatact agaaaatccg
      361 aggattttag tacggtccat tattcattca attcctggca gcctttatga ttacaaatca
      421 cttgattgac taactagaca ttctcaaagt gaattatgaa tcaggttcat ttttcctggt
      481 tgagagttgg tacatgttgt aactcttcca ctttgtgata tatcaagttc ttgtaacagt
      541 aataagagat ataatcaact ctttatttca ggacaaataa attgcctttt caaaaatgaa
      601 atgtggttgg taacatttta acaatgtgca gtgtaatttc ttccttgcta ttctcagagt
      661 gcaatctgct gtgatgacat agcttttgag tatttgagtt tgctgaaatt attttaagag
      721 cttcacacct tttgtccacg cacgcagacc tcggtgaaaa tttggtgctg gggttaacaa
      781 gagcgagtgg tcccgttcct tgctgaaaag gagctgcaga aacctaaacc ctgggccaca
      841 atttgccctt ttgtgcctgg ctctgatctc agcttgggaa tgccgaacag ttttaaagat
//
LOCUS       KCKM01002313             466 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36361apa ultra-conserved element locus
            uce-7449, sequence.
ACCESSION   KCKM01002313
VERSION     KCKM01002313.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 466)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 466)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36361apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>466
                     /note="ultra-conserved element locus uce-7449"
BASE COUNT          111 a          101 c          119 g          135 t
ORIGIN      
        1 ggagagacag ggaggagggg aggggagccc cggtggctgc gattggtaaa gctccgccga
       61 ggcatctgcc agcaggactt gagaggaatg tgaaaccaaa tcatttttaa agatagacgc
      121 agaatacaca gcgtcttgag ccagggttta aattcatcct tctccgcctg gcttctcgca
      181 aagctcctgt cagcttgcct ctgtctcctc tcaggactct gatattccct taaaaataac
      241 atcattctgg attctttgga attactaagg tggcgaaaga gatcatggta catactgtag
      301 ggtaagtaga aagcttgcct ttacatttgc tgcggtggtt cctctgggct ttgcttctgc
      361 tttcagagca ttcggcagtg cctgtaggat gaggtagata tttaagtaac gctttccctg
      421 ggtgatattt ccctcctttt cccggtaaag attatttgaa ctttat
//
LOCUS       KCKM01002314             890 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36375apa ultra-conserved element locus
            uce-7804, sequence.
ACCESSION   KCKM01002314
VERSION     KCKM01002314.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 890)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 890)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..890
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36375apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>890
                     /note="ultra-conserved element locus uce-7804"
BASE COUNT          263 a          198 c          175 g          254 t
ORIGIN      
        1 gcccgaagac ctgctccacg caccacctcg tcgcagctcc agtctccgcc acccaccggc
       61 tgcgtgaccc tgccactgct tgtgatacat cgtcccgtca ccctcaccgt ttacagcaaa
      121 aaagctattt agccggtgcc tgcaaccctt cagcccgcaa cgccttgaca gcagaggtta
      181 taaaagaaaa aaaagagggt tagaaagaaa gaacaatgtg caatcggcac tgcattagag
      241 atggaaaaag tacttaaagc ctgcaacatt catcaaggct gaatacataa atgccacatt
      301 ttgaataagc caagcaaaag acaatgacaa aggaaaggcg cgttgcttca ggaatctcta
      361 tcattttcat ttgctgctgt caggaacctg ttttttgcct ctcactctat cagccattat
      421 agcattaatg aagtaacctc acatagttat tgactggctt gtcagagtcc ctgcctgatc
      481 ccttaataga aaccattggt cttcagttaa aaatggggtg agctgggagg tgctgtgggc
      541 atgtgctgaa tttcaagtgc actcctgagg ttatcaaaag ccatgaaatg caaattatta
      601 tattttttaa acacacagat ttcatgcaac tgagcatata aaattgacta atactgtact
      661 ttatgcattc ctaataatgt ttccaaatat gctctgcata tgatctttcc ccagaaagtt
      721 gtgggtggta tttgaataaa cagaaatggg cctagtttta ttttgtgaat aaagtagttt
      781 cctggatgtt gcgagtctct gttccttcta atataaggta atgtttatgc actgtctgtt
      841 caaacaacat gggtaatcct ttgtctgaat ttctgtctca gatcaaaatc
//
LOCUS       KCKM01002315             921 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36390apa ultra-conserved element locus
            uce-7322, sequence.
ACCESSION   KCKM01002315
VERSION     KCKM01002315.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 921)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 921)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..921
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36390apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>921
                     /note="ultra-conserved element locus uce-7322"
BASE COUNT          289 a          189 c          195 g          248 t
ORIGIN      
        1 ccacagcact tactgtaatt tttacacacc acaatgtgca gattcgaaag gcgtgacccg
       61 agagacagct aacactggaa tctagaagtc actcagagtt tcacttagtg taagatcaag
      121 gaaaaaaaag gccacaaaac acagaaaatc tgattattgt aacccattgc acagcgaggg
      181 gcagatctca cataatataa aatcaatcca cctaaatctc cttgcagcgt gagctagttc
      241 tgagatgggc aacgcagctt cagtgcgaga agcaccaaac tccctctaca tacacacgag
      301 ggagaacctg acgcctgaga cactggctta ttctctgatg tgtggatatc atatagttaa
      361 acccattttt caaaggccaa ttctgtggtc tggcggcgag gctggggcat caccgggctg
      421 caaatgtgag ccatttgttc gggctgcacg gcatgccggt taagctgttt acttatgcaa
      481 tggtggaaat gtgacctggc tattgtggtg attaacagag tcaaatatcc tcacattaac
      541 tagtgagctg ggcaatcagg ctggattatt gttacattca atttaaatta cagtggcatg
      601 acaggtcctg aggtatttag taacggattt cacagcacag atatgctttg tgtgtaatga
      661 ataaactctg gagagcaaca aaagggggaa aaataaaata aaaaggtatt ttatgatcat
      721 tgtgaaaaat ttatggagtg tagctggcat gaaattctat aaaatgaact ggctccaacc
      781 agtccaacaa caaagcatgc acttttcttc ctgctgctta tgaattatta ttactgagtt
      841 ctcccatgtt tactcattag catcgagccc tttgcaaaac tgtgattcaa aattgaattc
      901 ttcttaattg aaaatacccc c
//
LOCUS       KCKM01002316             740 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36404apa ultra-conserved element locus
            uce-7207, sequence.
ACCESSION   KCKM01002316
VERSION     KCKM01002316.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 740)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 740)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..740
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36404apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>740
                     /note="ultra-conserved element locus uce-7207"
BASE COUNT          202 a          167 c          154 g          217 t
ORIGIN      
        1 tactgcagat gcaaacccca ttgtgcatgg gttccctgcc ctcccaagat tttgggtttt
       61 gtcaccacct gggtacagga agcagaagcc tttgtctctc accatctaat caaggtaata
      121 attacaggca gtggatctgg agctaagaag agggggaaaa ggcttttcaa tcactgcctc
      181 tgcatttcaa tcgaagcccc atgctgtaca acgctggaga acaaggtgta aatcagctta
      241 agaacatagt tctgcattca gtgcgtggtg gtttacagct cccaaatgac cttcatctat
      301 cttccttagc tgtagaggtg tataattgaa ctaaagagag gcttgaataa tgaggttgag
      361 agtggcagct ccgctgctgt tgcttaatag tgtaccagcc tcgcactttg ttttctgata
      421 tgtaacaaaa tactgtagtg ggtccaattc ttcagggtga cacttggtga tagtcccact
      481 tttaaaacag aaaagagcac tataaatctt tggctgcaac taggctcccc aaaatacaat
      541 tatatgaacc attttctatt caatatctgc tcaagaaagc tcagagagac aaactgcaat
      601 tatctgctgc ttctttcagt cacggaatct tttatttttt ttaacttttc atccttcttg
      661 caaaagattc ccctctcagc tcggaggact acactgtgac accttcgagt gagacttctg
      721 cactgggacc ttgctggaac
//
LOCUS       KCKM01002317             656 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36419apa ultra-conserved element locus
            uce-4113, sequence.
ACCESSION   KCKM01002317
VERSION     KCKM01002317.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 656)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 656)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..656
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36419apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>656
                     /note="ultra-conserved element locus uce-4113"
BASE COUNT          181 a           93 c          133 g          249 t
ORIGIN      
        1 aacagggttt gatatgttta atgtacacac aaaatcctga ctaaattctg gaaagaaatc
       61 tctgaactcg ttgaaatgtt ctcataggtc tcacaaaaga gcaatgcctt tttttccttt
      121 aagaggattg aaactcagtc ttcagagtgt aactaaggct ttatatcagg agttcttgtg
      181 tcctgtacta aagttttttt ttctattaac ggtgaggttt ttaatataca aaaatgagct
      241 aatgatgctt cagatgatat atgtaatgta ttctttttat tttatgtgta gatggctctt
      301 ggacaagtcc gagcagtaca acacactggg agggaatgcc ctctcctttt aaaggcagga
      361 atttttattt attacctgtg tttagtatgt aaacatgaca taaactagtg gatctttctg
      421 gattgacaca gatatttctt ggaatatgtg tctgagtttt tgctgcacat atattatggt
      481 ggttcatgta acctttattt tggggtggga aggaagcatc tgaagtctta tcttctcagc
      541 tgtaggttaa ttatgccttt tattccttta ctgtacagaa agcatttgga tggtagtgat
      601 gtagttgctt tgaatctgca tttttttgaa gttttatgct atgaaatgct tgatat
//
LOCUS       KCKM01002318             558 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36434apa ultra-conserved element locus
            uce-6591, sequence.
ACCESSION   KCKM01002318
VERSION     KCKM01002318.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 558)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 558)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36434apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>558
                     /note="ultra-conserved element locus uce-6591"
BASE COUNT          172 a           73 c           87 g          226 t
ORIGIN      
        1 aacccttttt ttttcatcgt tagggtatac gtgctagagt tgaatcttta acatttttag
       61 gcacagatgg aaaaagttat tggctccttg aaaacttatg ggacaaaatg gatcctcaaa
      121 gcatgtatgt acttacaaac caagctgtag agatcaagaa aagaacttta ttgttgatct
      181 caagatttct aaattgtcga gatttatatg gagttgtggt ggaactagtt aacacttaga
      241 gcttttggta tgtaatgact atttgctatg gactgatatt aaatgtttca aaggattgcg
      301 ttcttaaact ttctggattt ttgttactct cctcggatta tattaagtag ttaaaaattt
      361 ctttgctata ttacattaaa aacataagaa ctttgggtct cgtatttatt ttcacttgtt
      421 ttactaatta tttacagaac accattttaa cttttttatt ttataaatgt gtagtatttt
      481 aaacatatct ttaaaaattg ttcaattgga actacattaa cttctgattt gtttttatta
      541 ggatttttaa tacacctt
//
LOCUS       KCKM01002319             491 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36450apa ultra-conserved element locus
            uce-6800, sequence.
ACCESSION   KCKM01002319
VERSION     KCKM01002319.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 491)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 491)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36450apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>491
                     /note="ultra-conserved element locus uce-6800"
BASE COUNT          137 a           93 c           77 g          184 t
ORIGIN      
        1 attatgataa aacacattat aaaaattttg ataatgaaga gttaaaaagc tctcactgtt
       61 ttctttttat aagccacctg ttgccttaga tgcataagta tataaaattg aacaaagtgc
      121 tcatcacttg tcagccatca gtggcagcat aaaaattact tgtggtgctt gctttgcaag
      181 aagttctttt gtgtttgtga catcagcttt gttttataca attaaagtat tacacgctag
      241 aataatctaa attgcaacca ctaaatggtg atgtagttct tttttcacag agctgaattt
      301 gtttactggt tatatacagc tattgactac tgtttaatgt gacatgtccc ttttgccttg
      361 aacaatcttt ggaaaaggtg ttttttttgt gtcccattct cgtctcccac cccctccatc
      421 cctcctcccc ttctccatta tggaaggctt ttcttgtcct ttttctaaca agtaggtata
      481 aatatgttag a
//
LOCUS       KCKM01002320             938 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36464apa ultra-conserved element locus
            uce-5642, sequence.
ACCESSION   KCKM01002320
VERSION     KCKM01002320.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 938)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 938)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..938
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36464apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>938
                     /note="ultra-conserved element locus uce-5642"
BASE COUNT          262 a          167 c          200 g          309 t
ORIGIN      
        1 ggtgttgttt acccaacttg ttactacgtc cataagccta aaccattttt gtttgagctt
       61 tcttgtaaaa tctaggactt catttcctga atgctgttac tagttctagt tttgtttaat
      121 ttggccttag gttgcattat tcaattagct tttatttaag agatgagtct tatattccaa
      181 gaaacagtag taaattataa taagagttag tctttaaaga tgccatactc cagccataac
      241 tttgaattta ttctgttatt ttaaagcaaa gttagtgcct gtctctaaag gttatgggaa
      301 gctcaaatgt ttatttgatt attttttttc cttgatttca gggctttttc cgcaggagta
      361 tccagaaaaa catggtttac acatgtcaca gagataaaaa ttgtgttatc aataaagtta
      421 ccagaaatcg ctgccagtac tgcagactac agaagtgctt tgaagtggga atgtccaaag
      481 aatgtaagtt gtcttcagaa aaaaattatt gtttgtcata tcctacgtat atgtggcagt
      541 cgtaagagag aaaaacgtta tgaaattact tgattgaaac cagtatccgc attcacgtgc
      601 agagaaaggg gtatgaattt tgtacactgt actttgtgaa cttcgggggt cttagctttg
      661 cagcctaaat gccatcagtt aagaacttag agcacaacac acagcctgta tggcatggcc
      721 acgctgtgtg gggacaccca ggtgggtaat tttgccgagt tttctaagag aacaaaccca
      781 cagatacttg ctttaggatc gggttatgtc ctgtctggtc tagaagagct ttcttgggga
      841 aggatgtaag gggaacagca ctgactctta gctctgcaga ctagctcatg gctttgctgt
      901 catttcacaa gggcttcccg ctggctgtgc agccttct
//
LOCUS       KCKM01002321             906 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36479apa ultra-conserved element locus
            uce-1750, sequence.
ACCESSION   KCKM01002321
VERSION     KCKM01002321.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 906)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 906)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..906
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36479apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>906
                     /note="ultra-conserved element locus uce-1750"
BASE COUNT          256 a          203 c          185 g          262 t
ORIGIN      
        1 tgtctgtgta tatatatgca tttaaataat aataataacc tccaggttac tcgtttattt
       61 gccgtggctt caaaaatttt gtggcggaaa cggagaaatg agaatgattc catttttatc
      121 ctccagtaat gaatccctca aattaccata agccttgttc tttaagttca gggtaaatga
      181 gttagatttt attcatattt ttttgaaggg tcgaatagct gtttgatagc ctccctttgt
      241 ttattcgtcg ccaaagtcta tataatttcc cacgtggtca gccgcttatt tgcagtctct
      301 ccagaagtat ttatttaggg taagagacca cctcagcggg agcggaggag aagcagcgtt
      361 tctgcatcgc actgcctctt ccgtcccatc tcagcccatg gagctctttt gacagacagc
      421 acgaaaaaaa atctgcataa ggaaaagtaa ctgacagctg gggtcagact ctctctgttt
      481 aatgacactg ccagttacac attttgaatt gtttaaatat gagtctacag cttcaacgat
      541 catcatctca ctggttccac ttttcatacc caacagccag gaaagtgaca cgtaattaca
      601 cacttactga tggtatcgcc ggggccgata attaaaactg ccacgggagg attgctattg
      661 ctagtctaca gctgggatgt tgtcaagagg tagaaactcc agcagctttt aacactatct
      721 tcttacaggt ggaccacggg cgccggcggt gaagtaatag aaaggcctca gcacatcatt
      781 cacaatgtct cgcacaaatg aagaaaatct attaacaatc caataagtga aatacaaaca
      841 cgctgaccca agggttaaac tgtcttggtg gacgcaccgc tcgccgccgc tccgcattgt
      901 tctttt
//
LOCUS       KCKM01002322             472 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36495apa ultra-conserved element locus
            uce-6043, sequence.
ACCESSION   KCKM01002322
VERSION     KCKM01002322.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 472)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 472)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36495apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>472
                     /note="ultra-conserved element locus uce-6043"
BASE COUNT          136 a           97 c           97 g          142 t
ORIGIN      
        1 tcagatagcg tgttaatata tgtgcaacgt gtatataagc agtaactctt tttccttagc
       61 cagttagctg gagagttcat tagattccct atgaggtgca aaagagggga aggaagccag
      121 tgtggagtta ttcattgtct tatgactcaa ttctaatcac ttcagtcagt gtgactgaca
      181 gagaaatgct ttccactgtg attgagagta ttgatttctc agcccctttt ggggcacact
      241 ggagagacac aatcagagcc ttcactttca aaaaacctct tcatctgcct taatcatctg
      301 atcgataatc agcatcagtg ctgaggatct tcaacaaagc cttctccaat gtctttattt
      361 tctttcctcc attgcgctac aaatctgctg agtcaaggtg atcgtaacag atcagaaaag
      421 tgaacagtaa gcaacaacag tgacagcttt tagtgacgct tgttaggcat aa
//
LOCUS       KCKM01002323             742 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36511apa ultra-conserved element locus
            uce-5599, sequence.
ACCESSION   KCKM01002323
VERSION     KCKM01002323.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 742)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 742)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..742
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36511apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>742
                     /note="ultra-conserved element locus uce-5599"
BASE COUNT          244 a          134 c          128 g          236 t
ORIGIN      
        1 ttcactctgc ttgcaggaca catctgaaac ctaactttct aaccagaact tgggagaagt
       61 ctgcagatgg tcagtagcct aaacaagttg gtaataagcg atttttttgc ttagtaaaga
      121 actgactttg aatcatgaaa ccagtcattc ttctcttaca ccgatggtct tctcctgtgc
      181 aaagcataac agagcaacaa gcgcacatgt gtgtgtgccc gcgtgggttt ctgcaactga
      241 gccagcaaga aaggcaagag cacttaagtt catgcacatt tttattgagt agtaatataa
      301 aatgcttctt tcattgttac aagtgcatgc tttgattgcc aacatttcga agtcaaatta
      361 caaaggcaag gctgtaggct gtagtgaatt acttgggcac ttatacaatt gttaaaaaat
      421 atcaatggac tgttttgttt tgtttctttt tcttttttcg aatgaaccag ttgaaacccg
      481 taactgatat acaaagggaa aaaagtgaaa aaattacaca ttttgtggca catgacagaa
      541 cagaacaaaa tgactaaacc attatgacat taacagttat catgcattta gaatttcaca
      601 tgtaactaca aacttattta aatttcacaa ggtttgctaa acatgctacc catctatatg
      661 tgcactgaca agcttatgtt aaaaacttta agaatactct tttttcaaag cttttttttg
      721 attacaaaat ttcaaaggca tt
//
LOCUS       KCKM01002324            1060 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36527apa ultra-conserved element locus
            uce-6684, sequence.
ACCESSION   KCKM01002324
VERSION     KCKM01002324.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1060)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1060)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1060
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36527apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1060
                     /note="ultra-conserved element locus uce-6684"
BASE COUNT          225 a          258 c          253 g          324 t
ORIGIN      
        1 ctcatgcagc aagtctggcc ctgagagagg cacgtttcca cttggcgaag ctgctgctgc
       61 tgcttgacac ccaagcagct aatcagcctg ctccgcaaaa ggctttggac tgaaatgctg
      121 gaaattgcag ttctgtcatg tatgtgaagg ggtgaagact gaacagacag tggtctcctc
      181 ctggtagtgg gaggggttgc caggtggata tagtttgctg ggattttaca aatgcttttt
      241 tggagaaggt ggatactgtt tgccaagata ggtatttgct gcccaggcaa aactcccagt
      301 gtatttacag cagctctacg tggtctctgt gtgcgcagta ggtctgtgtg tgtgcatgta
      361 cgtgcttgtg tatgcctttt ttaccatgct ccggctgcct gcctctgatt taagggcagg
      421 ttttattccc cagctgcctc agggctcctc ttttctgatt gcattaaagt ctctgtaatt
      481 ctcccctcat taatgattgg catattttta cctctcacta aaggagcttg gaggcaactc
      541 ccgtggggcc ctgctcgcca aatgaaacaa tttcatcctg ctccagaaac gcattaaaaa
      601 gggtttgtca ggatcttatc gctagttagg gaagctaatc aaattacttc tatttattag
      661 ctgccgcagc aatgtgtcat tccatcaagt acaggtactg ggacaggcac ggattgcacg
      721 gagagctctg tgcatccagc gctgctgccc tgttctgcac aacagcgtct cttgacatgg
      781 gaggctgcag ggttaagaga ggtcgtgaac ttttagcaac agtgcttctg ccaccattcc
      841 cagcaggatc tccccgctgc tgcacttctt caacttgtct tttccaggcg actctccaaa
      901 gtgtcttccc agttacactc ctgagctttc accattgagt ccatggcttc tgtatttggt
      961 tgatcccttc ttgctcttcc tgattatact ttgctacaga ctatttcttt cgacatggtt
     1021 tagggttttt ggcaagttta actccttatt aaaccagtcc
//
LOCUS       KCKM01002325             892 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36542apa ultra-conserved element locus
            uce-7484, sequence.
ACCESSION   KCKM01002325
VERSION     KCKM01002325.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 892)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 892)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..892
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36542apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>892
                     /note="ultra-conserved element locus uce-7484"
BASE COUNT          240 a          166 c          213 g          273 t
ORIGIN      
        1 ggttttttcc atgaggtttc cgggaagttt cacacgggga gaagggaatc aaggagttac
       61 ctggctcata accctttgtt agtgcccttc catcccttct tcgtaatagc cagagggtct
      121 cagcttttat gaaacagcag agaggaggtg gttttgattt agtttctttg tggaaagttt
      181 cagtgtcaca attccctaga tggtacacag cgctctgggc ttctgcctgc acaatagctg
      241 gttttaaaca tttctgttta atcaagagtg aagtaaatgt cagagattca atgttctaga
      301 tcagcagttt ccaacactga tacatcttaa tcaagcaatt aggtgccttt ttttttgtta
      361 ttgtttggtg ttttccacat tggggaaggg aacagatttg ctgctttgct ctgatgactg
      421 ctagcagcag tgtttgttgt taacagagac atttacacct aaccgccagt tggcaggtgt
      481 taacactttg ttacttgcta ttcccacatg ctgaggattg tgggaaagct gtcaagcttt
      541 cggtcttgtg taacgcttcg cttttacaac aacaacaaca acaaggagaa gaggagaagc
      601 tctgagctaa tgcagaagct ctgtaggaac gctggtgaag gaaacaatag gacagcttcg
      661 acgggactaa tatgaggctt tgtgggaagt cggagatatt tccttacctt ggtttggaag
      721 tgggtagatt ccatttttaa ttactgataa ggtctgatct ttagaagaaa ccaagaatgt
      781 actgtgtgtg ccccaatgtt tctagtctgc ctctgacatt tgcactcatt tgtattcagg
      841 aaaaaaggta taagtacagc ctacaacctg agaaaataac acaggacgag ga
//
LOCUS       KCKM01002326            1000 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36557apa ultra-conserved element locus
            uce-1783, sequence.
ACCESSION   KCKM01002326
VERSION     KCKM01002326.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1000)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1000)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1000
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36557apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1000
                     /note="ultra-conserved element locus uce-1783"
BASE COUNT          331 a          189 c          180 g          300 t
ORIGIN      
        1 ttaaggcttg tatttaatac agtaaaaaag ccaacctgca tctacagcat atttagtaga
       61 aagtaacgtt attggacagt agcattgaaa gtaatgttat ctaaggtttt ttccacagtt
      121 actgattttt aagaaaaaat gggaggaatc cagatattat gctactgaca aaacaatatg
      181 caggcttttg agtggggagg gtccttttat tagaaagaaa cacactttaa ttagaagaaa
      241 tatgttaatt tcaatagcac attcttcata tctctgcccc caaaaatctt tgcacacacc
      301 tacattcttt ttatggacag tacaaaggag gataatagat gcctataaaa gtaactagtg
      361 aaattctgca ttaggataat ctgtcaccca tttccatttt ttctgaagaa agcaagcata
      421 atcaaaagcc taaatgacaa agagttgaca gtaagattct gtagtaaatg attccagagt
      481 cgctggcctg cggagatgct gaagaagtcc ccagcagacc tgattaattc cagtttctcc
      541 agctgccagg gcagcagagg ctaagcagtt tcacagagag gagcctatta ccactactag
      601 gctgaaatag atctaatcaa ctcacagccg ctcaaaagaa aactttacag gtttagctca
      661 ctaaggcagc gctttaaaat gatgactaca aaggatcatg ggagtctgaa agcatttagt
      721 ctttattgca gctcaaggaa attttctgct gtggttaggc catgctaatt tactgaacat
      781 gacaatgcct cccagattgt atgacatcat ttcaataatg gccctggtcc tcttagttaa
      841 atatttctac tactactttt ttaattctat atactccatt taatgaaata ccatctctat
      901 cttgggatta attaggttta ccgttccaaa tatatgggct agcctgcttt accattcagt
      961 taaaatgatt ctgcataatg tgccgtgaca ctaacaaaaa
//
LOCUS       KCKM01002327            1184 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36572apa ultra-conserved element locus
            uce-246, sequence.
ACCESSION   KCKM01002327
VERSION     KCKM01002327.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1184)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1184)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1184
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36572apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1184
                     /note="ultra-conserved element locus uce-246"
BASE COUNT          322 a          310 c          253 g          299 t
ORIGIN      
        1 ctatggaagt ctaaaataat taatttaaac aggcatgtaa ccaaatgtct aaaaaagttc
       61 actaccaaaa atagacgtcc acagagtcac ttgagagtat cttcaacaat caaaaacttg
      121 gggtcccaaa gaattcagag tatttcactg aacatagcta gcacaggctg aaagaaagag
      181 gaaacggaac aggcagttcc ccaacatcaa agcagtgggg gtgggaacaa tgaaaggcac
      241 ccctaggaaa tatattggta gtgtagttag ggcaacaaac ctgatccttc acactttttg
      301 gtaatgtcca gatcctctct tgcccttgag ttaagtgaat tgaaaatggt gaattgtgtc
      361 attaaaatgt actaatcttc ttttttcttt ctcttttcca tcccaggagg tgaattagtt
      421 atccctctac ttgtagaaga ccctttagat atccctccta ttgctactcg tgcacctttc
      481 attacacttc cccctacctt tcgccccctc ctcaccatta ttgagaccac caaagattcc
      541 ctgtccatga cctctgaggc ggggttacct tgcttgtcgg accaaggcag cgatggttgt
      601 gatgatgatg gcttggtgat atctgggtat ggctcagggg aaacctttga ctctaacctg
      661 ccccctactg atgatgaaga tttttacacc accttctcct tggtaacaga taagagtctt
      721 tccacttcaa tcttcgaagg tggctacaaa gcacacgcac ccaagtggga atccaaggac
      781 tttagaccta acaaagtctc cgaaactggt aggactacta ccacgtcttt gtcccctgag
      841 ctgatccgct caacagcttc gtcctcgact gggatggtac ccaaattgcc agccggcaaa
      901 atgaataacc gtgagctcaa accccagcct gacatagtct tgcttccgtt gcccactgcc
      961 tatgagctag acagcacaaa gctgaagagc ccgctaatca cttcccccat gttccgtaat
     1021 gtgcccacag caaaccccac ggagccagga atcagacggg ttccgggggc ctcagaggtg
     1081 gtccgtgagt cgagcagcac aacggggatg gtcgtcggca ttgtggctgc tgccgccctc
     1141 tgcatcctca tcctcctgta tgccatgtac aagtacagga acag
//
LOCUS       KCKM01002328             788 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36587apa ultra-conserved element locus
            uce-7489, sequence.
ACCESSION   KCKM01002328
VERSION     KCKM01002328.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 788)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 788)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..788
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36587apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>788
                     /note="ultra-conserved element locus uce-7489"
BASE COUNT          237 a          139 c          131 g          281 t
ORIGIN      
        1 gaattcacat taacaactac attactgaag tcctctctag ccctccagtg ctacagttca
       61 aggtaatatg tgacagattt gaacattctt aaggaagaaa atctccagag tgtgtggatc
      121 gcagctttgc tcactgggag attacagtgg ctcttatatc tgttacaaat gtgcagttat
      181 actgataact tcaaaagtgg aatattacat atcatgctaa aattctctat caacctctta
      241 tgttctttct ttgtttcttt tttttttttt cccatttagc tattgctggc ttgccagaga
      301 tcttgaactt gagaaaggtt agacatcaca atgctggagc agtttgtgag catcagcaga
      361 tttagcttgt aatttcattg atctatgtgg gcttgctgtt tgcaaaccag ctgctgcact
      421 gtttccccac agctactgat ctgagtagca ttgatttttt cccttacatt aacatagcat
      481 tacttcttta atgggcaata aatgactgga tgtaaataca aacagggttg caacaacaaa
      541 agagaataca ttagttcttt ttatttaaag aactctatta atattttcca ctggaagaat
      601 taaaaacatg agttattgat caagataaat tctattttta gtgggtttaa ttccacacat
      661 ttcttttgct aagaaatcaa ctttttttct tactgtgttt gctcatagtc caaaatgttg
      721 catcttacaa atacagcatt tttacctcag tataaatgga atttattgag gaagaattct
      781 agaaagca
//
LOCUS       KCKM01002329             860 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36603apa ultra-conserved element locus
            uce-5297, sequence.
ACCESSION   KCKM01002329
VERSION     KCKM01002329.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 860)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 860)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..860
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36603apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>860
                     /note="ultra-conserved element locus uce-5297"
BASE COUNT          215 a          169 c          178 g          298 t
ORIGIN      
        1 tacaataatc tttttatttt ttcttttaaa aggggccttt acactaacat taaactttga
       61 tttgttttag ccttcctcat ttagtcactt gtttgtttgc agtcagtcca ggtgcaagtt
      121 gaaactgata agagctggca ctacttgttt tattgtgaac cttattcagc ctgatattta
      181 attatgtttc catgtggatt tgtaatgtgg attaatagtt ttatttcact cctgtgatta
      241 gtttctgttt gttctaattt ctttttggct ctttcttgac cttgaggtga aaaaacacag
      301 aagatatatt ccctcaattt aatgccagtc tgaggtgttt ctcctgcatc atcagatcaa
      361 tgaaaagtaa atagcctaca cttcttgttt cacagtgcag tattgatctt tcttcagctt
      421 ttgcttccct ttttccctgc gtcttgtgtc tttcaacccc tgggaccgaa gtgattgcca
      481 tagattggac aagctaacaa gcgcgtgata aggaactggt gttttgtggt atactcacat
      541 tcatacgcct ggtatataaa gcctagacct ctccgcattg aaagagaggt gccattttgt
      601 gtatggcaca agtcactatg aaaaagagcc acagggaagg caccagagca gcagaggatt
      661 ttattctcca caccgatctt ttattcctac agctggtgcc aagctgggta aggacattac
      721 tcctctgaaa agtaagacaa gtagcctgcg gggaatgcca caagctgctt tttgctatgg
      781 cgatgtatgg gatggtggca gcccgtgggt aagtctgagc tcgatcttat aatgaccgtg
      841 atatttgtgt caagttctat
//
LOCUS       KCKM01002330             422 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36619apa ultra-conserved element locus
            uce-1941, sequence.
ACCESSION   KCKM01002330
VERSION     KCKM01002330.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 422)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 422)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36619apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>422
                     /note="ultra-conserved element locus uce-1941"
BASE COUNT          128 a           75 c           70 g          149 t
ORIGIN      
        1 atttaggaat ttatggaact tatatgtttg caggcgtcag aaagtccttt ttatatagcc
       61 ccaccgcttc actgtacaat attaatgcac tctgcttgaa aagccgtaat aaattatatt
      121 tttaatgctc ttaccctggc tttcttaaga tgcatacatt cttggcaaac aatcaataaa
      181 tagggtaatc atgagcagag gccaaagaat ttgctgaagt gctgtttttc catttttaat
      241 agataaagat ctaacaatac ggactgctgt gtctgttcat ttcaggatca atatattctt
      301 tgttttcgcc aaaccgagga aaaaataaat gattgtacga taaatgttat gcatcagaca
      361 caatgaaatt cctctgcctt ctaacttttt gcgtttaata gtcttggttg cattttgcac
      421 tt
//
LOCUS       KCKM01002331             905 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36634apa ultra-conserved element locus
            uce-4546, sequence.
ACCESSION   KCKM01002331
VERSION     KCKM01002331.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 905)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 905)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..905
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36634apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>905
                     /note="ultra-conserved element locus uce-4546"
BASE COUNT          293 a          167 c          181 g          264 t
ORIGIN      
        1 aagagcagaa cttaaaaacg aatcccaaat ggccatggtt tatgctcaga attgagtaga
       61 tggataacat cactgtagtg ttttcagagc gttgtacggt gcgctgttac atccccctct
      121 ctcagacacc tttctcttta gtatgcaaat gcacaattaa aagcattcaa cagatagaga
      181 tgaataagct aatacgctat gctgctagtg atttatcttc attagctggg agtatgtgga
      241 agtaccccaa agagcaaaga gatgctggaa agttgtaata gataaaaatc tactgactgc
      301 ctttatgtaa gacaatagat ctcgtgaata ttctgcttcc tctccaggca gtgagctagt
      361 atggttaacc aaaattgttg agtaattgtt ctgtggttga gaacaaaatg ctgaattaaa
      421 ctgttcccag cacaataatt gtgtgattac agcatttatg ttgctggcca aaagaacagt
      481 cattaggttt ggaagactta ccgaaaccac aggcacaaaa aaaaaatgca aatcacatgt
      541 aaattgtcct ctaataccta tagtggttta aaaattgaac taggagtatg gtatgtgtat
      601 atttaaagcg gtcaagccag aaaaaatgat tgtacattca agaactactt cagactagga
      661 agaaaatacc caaagattat tcattttcat tatgttgtac tccccctctt gtgagatcct
      721 gcacttcata tattacgcgt gtattctgct ttgtgaatgc tattatattt ttccccactg
      781 catagcaatc aggtattgcc tgtgagttgt aaggcaggta ggactcccac acctaactaa
      841 atcttgggcc aggcctgttc aaagagcaat atacagggga ggcaggcagc aaatatttat
      901 ctgat
//
LOCUS       KCKM01002332             719 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36649apa ultra-conserved element locus
            uce-4782, sequence.
ACCESSION   KCKM01002332
VERSION     KCKM01002332.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 719)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 719)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..719
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36649apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>719
                     /note="ultra-conserved element locus uce-4782"
BASE COUNT          191 a          142 c          174 g          212 t
ORIGIN      
        1 ccattggcag tgctaaactg agatgatatt ccaggtcttg ccccatggta ctgagctcta
       61 aagggctgct caaaggagct aatctgatat gcttgatgaa caggctgcgc ctctgctttc
      121 ttctgagaag ttacttgatc caagaagtcc tgtgtagagg aggaagaaga atgatttgct
      181 tcatcacctg aaaagggaaa ggggtgctgc gaatcaccaa ccattagtcc aaaatgagac
      241 ttgtcgggag tcgttcttaa cggagagttc attcccgatc gaaagctatt gacgggtata
      301 gacgtgtaga ccttctccat ggaaggaaat gctggctggg ttgtaagagt ctggttatca
      361 gtcacaaaat taaggctcgg gttgttcaaa taggcatcat tttggctagt tctgtccaaa
      421 gcttgttgca aaaactttga atattcttgt aacatactag ctttatccga tgaggaagct
      481 tgagagcttg tgccaactgt ctcagattgg gtgacctcag acacttctga agaattgatt
      541 gatatactgg aggtcacctc agtgtcagcc acactgaaag atatctcatg ttgtccgtta
      601 gccttgtgtg aataatgatc taacagagtt tgcagtacct catctggaat gacatttttg
      661 tcgtggttac ctttaatttc aacattcagt ccctgtgtgt ctaatatcga ggccgtagc
//
LOCUS       KCKM01002333             984 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36665apa ultra-conserved element locus
            uce-8014, sequence.
ACCESSION   KCKM01002333
VERSION     KCKM01002333.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 984)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 984)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..984
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36665apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>984
                     /note="ultra-conserved element locus uce-8014"
BASE COUNT          305 a          203 c          156 g          320 t
ORIGIN      
        1 agcatgaata tttcacccca tgtaattgaa agtttactct tgagtacatt cgtattctct
       61 ctcctgctgc atttaacatt ttacagcaga aattcaactc actcttaagg tatcctttgt
      121 tttaaacagt cttaagcaat attttgagag ttataaaatg ttctttccca tcttcagtct
      181 gcaaatgtgg ttggaataca attttaagca ggatgaagga ttaaacaaac aaaaaataat
      241 gaaaagtcaa aatgtgcaca ctgtgcaaag gtatggttga atacattttg ccttgtataa
      301 acttcacccg gtctacgtgg gttttaacat atttccatga ctttaaataa gaaaacatct
      361 taaagcacag cccatgggaa acccaagctt gattagtttt accttttact acagcctgca
      421 gagtgtaaaa cacagcacat cagaattgaa tttgtcatct ccagacctca caggaatttt
      481 gggaactaaa tagttaggaa gcatcttggt atttctcttt gctttaatca tagtagaagt
      541 ttcaatttaa acattcagga aatctccctt attgaaagca atcaactcat tgctgacagg
      601 gtctggcttt actgtgttta attttttggc atcatgcaaa acttgattgg ttacagccag
      661 tatgtgaaca ggtcctctcc ctcctcctcc tccccagaaa atgtaaaata tcctcagatc
      721 tttgctatat cattctgtgc cctatacatc ctagtatgtg tgcaaaccaa tggcatatta
      781 atgcaaaacc acacatggaa aatgtgcata ataactaata cacgcaagga aaaccttatg
      841 gccaaatagc tgtcctatat cttttggctg caaaatctta gaatccatct ccttgtcctg
      901 ttacttaact tttattttga gtgtgtctct tcatctagtc agttgtagac tcacaacaca
      961 gttctaagac tgcagcctac tctg
//
LOCUS       KCKM01002334             632 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36681apa ultra-conserved element locus
            uce-1896, sequence.
ACCESSION   KCKM01002334
VERSION     KCKM01002334.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 632)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 632)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..632
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36681apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>632
                     /note="ultra-conserved element locus uce-1896"
BASE COUNT          239 a          101 c          133 g          159 t
ORIGIN      
        1 aaaaaaaaaa atattgtcac agattcctgt gcattttttt tttaaaaaat aaaattttgt
       61 tgtgtaattt caggaaatgc tcctcagttg gacaggctac aaccagcaac agcaattcca
      121 cttctgtctg catcacggca cctttcaaaa agaagaggta ctacctctgc gattgaagaa
      181 ttcccgagaa tattttccag atagagcaaa gtgccttggg atattgccta gcagctctat
      241 gatgtgtgct atgtggtcta tgagggagag aaaaaaagga tacgggagtg gaaggggcag
      301 gggaaggatg ggataaaaaa gaagaggaaa gaaactggaa ttagtaaaaa atcagaaata
      361 gtttcaaatc aacaatgttt gcagcaaatc catgcagagg tttccaggat cagcagagct
      421 ctggcatcat tagtagtact taggaacaat gaatgatgcc cacattacca ctgcaaagag
      481 catttacaag caaacaagca tgaaaatgga caggtataca gatggaagca ggagttaatt
      541 ctgattttaa aaaaaattag taattgccta attcaaataa aaatacacaa tgtaaacatt
      601 attctggtgt cactcttaca aaaagaatag ac
//
LOCUS       KCKM01002335             982 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36697apa ultra-conserved element locus
            uce-3989, sequence.
ACCESSION   KCKM01002335
VERSION     KCKM01002335.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 982)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 982)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..982
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36697apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>982
                     /note="ultra-conserved element locus uce-3989"
BASE COUNT          325 a          196 c          153 g          308 t
ORIGIN      
        1 gagctcaagc tgcaagatgc cagcaaaaat ggaagtttat aaagaatcac tgccaggctc
       61 ttaaatgtag tagcacttgt gggactttct gcaatataaa tagtaattac cttcaatgca
      121 gaatatatcc gcaaaaataa atataccagt gcatatacca aaactcacaa atcagttttc
      181 ttcttctgaa gtaaacttta aaatctgtac gttctgagaa gaaataaccc tccaaataat
      241 cttgtgctca acatcgcctg atatgcactg cccaaataca tatacatgtg tatgcacata
      301 cacaagtgct ccgatataca tacgcaaacg ctacagtctt agtgtgaggg catctaccct
      361 gtagacaatt caatcaattt ctcaagtgac acccacacgt gcctgcacac acaaaagcag
      421 atgtggcatt aagatttaca aagttattga aacttttaac aagtaaaacg catctttact
      481 tagctacacc agaatgagga ataaaggggt ttacatatgt tccaattcta aacctatcaa
      541 tcaaacccat gttattcctt tgggagctta tttacatgca tatttatcag cctcacatgc
      601 taattccctg ctgttttatg cctgcgaggc atgtttatga gtcataattg ttgatctcat
      661 ttgatgtatt tcactgaagt aagacattat tcagttatgt ggcctaatgt caatgaatta
      721 cgatgacctg atcttcgaaa tgcaacttgc tctttaattt ttattagagc ataacttatt
      781 cagaagaaga aatacactaa aatggaagat tacatgcttt tgcagtcact ttacttaaac
      841 atcttatttt tgaaacactc ctccctacct ccaggcaaag ttttaaaagt gcaatttgta
      901 aacaccacat gaaatgaatt tttgcctgaa attagtacat atttctctaa gtgggacctt
      961 taagaagtgt ttttcttgtg tt
//
LOCUS       KCKM01002336             978 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36712apa ultra-conserved element locus
            uce-903, sequence.
ACCESSION   KCKM01002336
VERSION     KCKM01002336.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 978)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 978)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..978
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36712apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>978
                     /note="ultra-conserved element locus uce-903"
BASE COUNT          346 a          189 c          149 g          294 t
ORIGIN      
        1 gagggtaata ctagcaataa ctagcataag aaactaaatt tcatctgatt tattaattct
       61 tttaccctct agaagttcaa gaaatccttt cagaagagtt cttattgtta aaaatattca
      121 ttttaaaata taaacttccc tgcttttgcc taatttattt aacactcctt ttcaattaac
      181 aaaatacaag ccaagttggg aaaggacttg aattagtttc tccgaacata aactacagac
      241 atacaacagc tccaagtaaa atggtaaggc cttttgtctt aaagaccaga aatgtaacag
      301 aaaaaaaata taataaaaaa tgaaaattca ggtacaggaa ttatgtattt catactgaat
      361 aattatttct gtactgcccg taaatcctct ctggtaagct gtgcatctaa aactcatcga
      421 actgccaagg ggtaaacgca gctccatcca tcacacagcc acttgacaaa tacattccat
      481 aatagaagtt tatttttatg ggaggctgaa tcaaggactt tcccatgcat acaaaaactt
      541 gtcaaaatta tttatgagtc ttgctgagac acacaatatg tcatatcaaa ctcctatttt
      601 ccttccaagc acagactgtc aatatctctg ctactatcaa taatgtggaa caccgctgct
      661 atgggccctc aggattttga ggtcatttgc ccatcctagc ctgctgccag acgctgtctc
      721 tagctgcaat gcagctgaag agaggtgtat ttacaacctc tatgaggtgt agttaaggta
      781 agcactaggg acttcattca aaggctttgc caacataaaa taaaatggaa acatatgttt
      841 gaaaaaatca cagttgatta tgaaaataat gaaaaaaatt gcattggtct ctttctaaat
      901 tagaaaatcc aaaagcttac cagcattctc tggcataatt aaacaaataa tcacttctaa
      961 tgaatatgtt tgcacctt
//
LOCUS       KCKM01002337             412 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36728apa ultra-conserved element locus
            uce-3248, sequence.
ACCESSION   KCKM01002337
VERSION     KCKM01002337.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 412)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 412)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36728apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>412
                     /note="ultra-conserved element locus uce-3248"
BASE COUNT          109 a           79 c           89 g          135 t
ORIGIN      
        1 ttttttttgg tttcccccac ttcgtctcct tcctgcaggt tttgctcagg agttagccac
       61 tcaggaattc ctagtgcctg actgagcagt aatttagcaa gctctcttgt gctcttttcc
      121 tgtcagcatt aacatgtcaa ttcattttaa tagtctgggc atgcgcagag ggaatgcatt
      181 ttctcagtag gtatcccatg agcccacccc gcggtgcaga aatgtgttat agcttgtctc
      241 aggccacaga gacttcagca ggtttatttt cattatggcc aaatgtattt gttaagacaa
      301 agcatgaaca aggaaaagaa tatatgaaat gggactttaa aatattaaat gggatctatg
      361 tgtctgattg gtaatttatg acctatgaac agtataggtt ataaagggct gt
//
LOCUS       KCKM01002338             538 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36743apa ultra-conserved element locus
            uce-5348, sequence.
ACCESSION   KCKM01002338
VERSION     KCKM01002338.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 538)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 538)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..538
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36743apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>538
                     /note="ultra-conserved element locus uce-5348"
BASE COUNT          195 a           85 c           90 g          168 t
ORIGIN      
        1 taccaaacaa aacacagata atttacttta attttgttga catacgtaat gaaacagata
       61 ggagcctatc aagtactatt cttctgctga taagaccata acatcaattt aattatgtca
      121 tgtggctgct tcaaacaatt tagatatcac attgaagctt caaactaaaa tggttctctc
      181 gataagcaaa aattttactg ctgcaacttt cagtgtgaaa agggcttgca aacatttttg
      241 ttaattatgt attacagctg tccttcataa agttaattac taatagctga aaggcaatag
      301 actctatttg catatgtaca tgaaaggcat gacatatgca aaaatatgat tttaattagc
      361 attccatgat atgaagggct acaaatcaaa ctggcatgtt ataagatttt taacattaaa
      421 tgctgaattc atctggacgg gtttgcagta atggacaatg gaaggactgt aaaactagca
      481 ctgtgggata taagagccac aaaagccaag agatactttt cctttacaag tatgttaa
//
LOCUS       KCKM01002339             984 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36757apa ultra-conserved element locus
            uce-5119, sequence.
ACCESSION   KCKM01002339
VERSION     KCKM01002339.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 984)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 984)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..984
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36757apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>984
                     /note="ultra-conserved element locus uce-5119"
BASE COUNT          250 a          217 c          180 g          337 t
ORIGIN      
        1 ggggcaccgg tcagttctga aactgtaaca agccaaatct gtgaaatgac aataatcaat
       61 catgctaaac agcctcatga tttttaaaaa caaacaatag tactcaaatt tacaacttca
      121 tttggttctc cataaattaa catctttgtt agcactttct gacatcattt cttgttaact
      181 taagaactga tagttcgatt ttttttcaga tattttgatg gcatgacaaa tcagaaagaa
      241 gaggatgtac tgtttgacta gacacaagat cagttctgtt tgtggattac attttcagta
      301 agatgtatgg atctattttt tccttgttct tatatataga tcatgagact tgactgaggc
      361 aatatacata tcatccatcc atctatggcg aactacagcc atgcagctga caacattttg
      421 caaaatctct ctcctttaac agcttttctg aaactgactt cactgggttt cataatagga
      481 gtcagtgtgg tgggtaacct tctgatctcc attttgctag tcaaagataa gaccttgcat
      541 agagctcctt actacttcct gttggatctt tgctgctcag atatcctcag atctgcgatt
      601 tgtttcccat ttgttttcac ctctgtgaaa aatggctcta cctggacgta tgggactctt
      661 acttgcaaag tgattgcctt cttgggggtt ttgtcctgct ttcacacagc tttcatgtta
      721 ttctgcataa gcgtcaccag atacttagct attgcccacc accgttttta tacgaaaagg
      781 ctgaccttct ggacttgttt ggctgttatc tgtatggtgt ggaccctctc agtagccatg
      841 gctttccccc cagttctaga tgtgggcacc tactcgttca ttagggagga agaccaatgc
      901 actttccagc atcgttcctt cagggctaat gattccttgg gatttatgct tcttcttgcc
      961 cttatcctcc tagccacaca gctt
//
LOCUS       KCKM01002340             976 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36773apa ultra-conserved element locus
            uce-6875, sequence.
ACCESSION   KCKM01002340
VERSION     KCKM01002340.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 976)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 976)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..976
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36773apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>976
                     /note="ultra-conserved element locus uce-6875"
BASE COUNT          290 a          201 c          177 g          308 t
ORIGIN      
        1 cactcccaag agcagaggac aatattcatc tgcatgctca gggaaatgtt tacagttgat
       61 tatttaagcg cttctttgcc tttcaagatg caaaactgga gctgatggag tacagtttac
      121 ttcaggattt ttttcctttt tcctttcagt ccattcctct gttaaactta caaaataaaa
      181 aataattatc ccaggagaat gttatgtctg tgtaattttt tccactatat cgataattac
      241 cgtatttcac atgccccttt taattatata atgcctgaga ttaaaattca acagcctctc
      301 tcaaagagaa agtgctttaa tatctggagt gctgctcctg taaattggca tctgaaagat
      361 aggcaaaaaa aggggcataa atactaacat tcccattctt cttaactgac tgcaatgcca
      421 atgagctgca ccgactcttt acacagacct cccacattct tgataggatg ttttctagca
      481 gagtgatcca caaatattat cattcaatga caatacagtt tcatcaaggt acgtctcaat
      541 ccacaggata caagccccac acaacagacg gaaaatttgg cgcagtgatg cgcacactgc
      601 gtgtgttact tactggttat tgcagtggtc ataccgagtc ccgtatggcg ttacattaac
      661 gaatggcatg caagcacctt ctgttgaaac atctgtgaca gggaaatttc aggcagtttt
      721 ccaaatattt tttgtgctct ggaccaaatt ttcattaggg ctataaaacc tggcaggcag
      781 cattgttgtg tatgattttt taataaactg ggacatgcct ttgttagagg agtgaagaaa
      841 agggctcttt agagaattct tcctattaca aaaagttcag aaaacatatg acagctcacc
      901 aaatagtgtc ttctaacttt tttttctgtc tcctccaagt gcaagatttc ccgcttcttt
      961 agatgtgtac agagat
//
LOCUS       KCKM01002341             527 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36788apa ultra-conserved element locus
            uce-4807, sequence.
ACCESSION   KCKM01002341
VERSION     KCKM01002341.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 527)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 527)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36788apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>527
                     /note="ultra-conserved element locus uce-4807"
BASE COUNT          151 a          141 c          107 g          128 t
ORIGIN      
        1 gtgagccctg ctgcagggac agaccaacgg ccctgcgctc tgctcgcctg ctctttaact
       61 tctttgtcct cttgtcatat tttattcctg agcccagatg gacctgatca gtgtgattac
      121 tcgcacatca ctgtaaggtg gaatatacag cttcacccca ccggtgagaa aaataaatag
      181 gactctctcc ccaccaccca cacccactcc cacacttccc tccgaacttg aaataaaaaa
      241 cctgcaaaaa gatccccgat ggctttgtca gggagggggg atggtgagga ttggtacagt
      301 atataacatc tcagctctcc cggatcagtc acgcttccta attcaataag gtgagaagga
      361 gcataatttg atcatatttg ttttgcatca ctgcaaaaac agaaaatgag gggctgcaga
      421 gccgcaccaa tttacttcat ccgaccttga ttaaaagaaa attaattgcc gcatctctca
      481 ggatatctca ggcagcagcc aatggctctc cagaatggca caaaaaa
//
LOCUS       KCKM01002342            1178 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36803apa ultra-conserved element locus
            uce-2020, sequence.
ACCESSION   KCKM01002342
VERSION     KCKM01002342.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1178)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1178)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1178
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36803apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1178
                     /note="ultra-conserved element locus uce-2020"
BASE COUNT          281 a          258 c          257 g          382 t
ORIGIN      
        1 aaaaaagaaa ataacaaggg atttaatatt ggataaggca tgctctctat atgaagtgct
       61 ttataggtct tcacaagaca ttacaagcta ttgaattccc atcaaggaaa cctatttctg
      121 tttaattgtg ctaagtgcta aggttcactc tttaggtttt ccattctttt cagcttgtgc
      181 attgttcctg tgtaggcccc tctggatgtg agttgtgaag tcatacttgt ccgtgcaaag
      241 atgctggcat atgctgcact ggaaaggtcc actgtcacca tggcaactca tatgcaaagc
      301 atacatcact tcatccagaa agacaatgcc acagtgcaca cacttggtag aaagttcatc
      361 ttgagtactt ctatcaactt tctctgtttt tactacattc aagggacctt cattttttac
      421 atttggtggt gccttactct tttccttgga ggcaccattt gcagttggcc caggtctgga
      481 atgctttatc gccaaatcta gaggaatgtc attgtctgat ccgacagctg aaaaatgagg
      541 aggcagatta aaggtgggat aaggcacata gttttggcaa ggatttggta ggccaggcac
      601 atgactcaag tagtgtggat tcccaggaac agacagctta tatttactcc agaatctcag
      661 ccagtcagct tcactctgaa agtcattgtg tacaaatggc agtccaaaaa gcgggtactg
      721 gtatttctca atagggcttc caggtggtga atagtttgga tgtttcgcag gtctcatgta
      781 tttttctatc gggctgcctc tctctgagct tcctttccct tctgatatcg atgaactgtt
      841 tcctgggtct ccagtacttt cctgaggact ttttatctga atgtgcaaag gttgcatcct
      901 tttgtgaata tccagagttt ggctgaccaa tattggctgc tgagcagaat ggcttttagt
      961 caatgaacct ggggcctcat atttactgag gctgggaagc tgaatttctc tctgatgacc
     1021 ttcaggtaaa tgttcctctg acctcctctc taaggggctt ccattgactt gttcctcact
     1081 gctacccctc tgctgtttgt tcagctgctc agcctgaagt gcctccgggt taaggcgctt
     1141 tcttgttcgt ctcctaatga tctgctcacc attgttct
//
LOCUS       KCKM01002343            1081 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36819apa ultra-conserved element locus
            uce-7732, sequence.
ACCESSION   KCKM01002343
VERSION     KCKM01002343.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1081)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1081)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1081
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36819apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1081
                     /note="ultra-conserved element locus uce-7732"
BASE COUNT          293 a          230 c          213 g          345 t
ORIGIN      
        1 tttctctaga agccatgctt cgtcaataat tcaggaggag cagcagatct tacagcatat
       61 ttgatgtgcc agtaaacaga ctggagattg tttcatttca attagcccct ttgttgccaa
      121 caaaagactg acaaacacac tgagagaggg acaggcatat ggcacttttg ctttccactt
      181 tgcttttcat ttgatgatag tcctcttatc acaacctctt gccgattcac ccgcctcgtg
      241 cccgcttcct ccattgccat actttatcta ctattgttct ccttgtatca tcttacttgg
      301 gatcaagtgc tctccccagc acaaaaataa gaaaaggtat tctttttcag cctcttctga
      361 tctcccaggc taattggctc aggtgtaaac caagccagcg gggctgcgac tttgatgtga
      421 cactttagag ctgcgcacct ggtaacatcc ctgtttgtgt gtcaaatacc agccggccct
      481 gccggctgct caaacccagc taataaaaaa cgctagtaat cacgttgtat tacaaggctc
      541 aaattcatgc tgttacttta ttgcaaggtt gtcattaatt ttgcagggtg aacctggaat
      601 ctgatctgac ctgtttttaa taagtgtggg tctgtgtgca agtgtgtgag tgagtgacag
      661 aaaggtgact gccagctgtt tcttctttac atatggtgtt acccttggct ttgatcaata
      721 atgctgtttc actttaaaaa gaaactcatt ttgtaaggat gcagaagagg ggctttccta
      781 ctttccttgt ccctgtggtt tatttgtaaa gcatacacaa ttaggaaaag gtcagtcaac
      841 agcaagtaat atcttactgc tttgctagat tgttggtctc ttttgctctg tagagctgga
      901 cctgctgctg aacagttgtc ttattactgt tgcttgtaat ggtatttggt agaattacaa
      961 acctcagtaa agcctgggaa aaataataat aattttaaaa aagaaacaag gtcatgtcta
     1021 aaaaataagt caaaattatt ctcagtcaca agaactcttt ttcactccag ttcagtacaa
     1081 a
//
LOCUS       KCKM01002344             575 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36835apa ultra-conserved element locus
            uce-2662, sequence.
ACCESSION   KCKM01002344
VERSION     KCKM01002344.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 575)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 575)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36835apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>575
                     /note="ultra-conserved element locus uce-2662"
BASE COUNT          154 a          105 c          130 g          186 t
ORIGIN      
        1 ttttttaaac aatcaaaatt cttctttttt taattatgca aatcaaagtt gctgaggaac
       61 aagcgcttga ttagaccagt tgtcactgac ctaataaatt attttgaata ttttttacac
      121 aaaattggtt taattgaagc ttttgtaagt ctgtgcgaat gcgcttggtt catgccacag
      181 cacccaggaa tttataaatg ggcttggagt gttgttcagg caccagaaaa taaacctcca
      241 agctatttac tacctctatg atatataaag tttgcagttt tgattttgtg tgattatgtt
      301 cagcaatggt gacctttaga ggcaacaata ttgaagtgta atgaggagat gtttgatcac
      361 tggggtacaa tgaggagttg gcgtgactgc tccattcctg cccggaatcg gtgagatcca
      421 gctgacaggc tctaaccttt agaccgctgg aggttcggga gggatgggga tttactctgt
      481 gtatacacca tgtcagctat atgaaatttt atatcacttc tcccgtcgct ccgcgcgggg
      541 ttattgcatg tgtaatcaca ggaccggtac tgcgc
//
LOCUS       KCKM01002345             509 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36851apa ultra-conserved element locus
            uce-5956, sequence.
ACCESSION   KCKM01002345
VERSION     KCKM01002345.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 509)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 509)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36851apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>509
                     /note="ultra-conserved element locus uce-5956"
BASE COUNT          175 a           86 c           74 g          174 t
ORIGIN      
        1 aaaaaatcta aaattaataa agcatagtta agtagatatt ccatacagct gtattaaact
       61 tccaaaaaaa tttaaacaat ggcattaatg aatccattct aacattctag attatttttg
      121 ctagtggaat aagcctaatt aattatgtct gtttgatgtc actgaaacta aacagtaaat
      181 tcaataatct ctttacattt tcaccattta acctcctgca ggctccctaa tgtctattca
      241 gatctatatt aaattaagta ccaatgctaa tgaagggcaa taaacgtggc tgtcagtaga
      301 tttttctttc attaagcaca ttatcctctt actgagctgt aaatgagtaa acattagttt
      361 tgttaaacca tgcaaaaaga caggatgaaa atcattttta attgcacccc ttaagccatg
      421 tgctgtgggc tctcagtatt gttttttacc tttcagtttt ttgaatggat agaagaaggt
      481 ctctccagag aaatataaat gtcggcatc
//
LOCUS       KCKM01002346             878 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36866apa ultra-conserved element locus
            uce-2103, sequence.
ACCESSION   KCKM01002346
VERSION     KCKM01002346.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 878)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 878)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..878
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36866apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>878
                     /note="ultra-conserved element locus uce-2103"
BASE COUNT          272 a          165 c          164 g          277 t
ORIGIN      
        1 gctgttagtt ttaactgggt agtcaacaaa gacaagtatg ggaggtcagc tgctgaccag
       61 atgctgcctt caattaatat tccaacccta aaagacattt atcgttcagt ttagaaggca
      121 gagcagctga gtcataaaaa cagcccacaa aagatatttt aaagcattta taatggctaa
      181 attgcttgaa ataaattagc cctgaaaata aacatatttt gtacagtcta tgcgaaccca
      241 atttcttctc cctgtaaatt gcctggacta agtgggagtt tgtgtttgac aagagcatac
      301 atttgcttca ttattacttg tgggttattt ttttcctttt gaaaagggtt aataaactat
      361 aagatctcat tgccaactaa atgggtcctg aaccctttta agggacgaag acgctgctga
      421 agaacaagtt agaaagaaac gcagagcctg tgttgtaatg ctaacaggca attaacaaac
      481 tcatgggtgt taattatctt catactgtat catgttcaat tagctcagcc cctgcaacaa
      541 aggcaaccat gagcaattgc tttgataggc gtacagtact tcatttgtag ttaatcggtt
      601 taagccttgc agttgctagg ctaccccagt ctccagaggt aaaaagcttc acagatgcac
      661 tatgtttaaa tgactacaga gaactgttta aactcaaacc atgtataact ctttattgat
      721 ttttcacaga agatctcagc tctgatgata aggttttgat atattttcct gctacagcca
      781 gttccttgga gtattgcgga atctgtcaat atgcttctat tatgatctct tgatctgtgg
      841 ctataaaaac ctttagctgc agcccttatt ataaaata
//
LOCUS       KCKM01002347             398 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36881apa ultra-conserved element locus
            uce-4337, sequence.
ACCESSION   KCKM01002347
VERSION     KCKM01002347.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 398)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 398)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36881apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>398
                     /note="ultra-conserved element locus uce-4337"
BASE COUNT          135 a           93 c           77 g           93 t
ORIGIN      
        1 tacctcaaac aagaataact gtagcaagaa gcaagctctt agggcagcct tagtaagatc
       61 atgctacttc gtcagaacac aacagtaaaa aagccacgca aatggagatg aatggagcac
      121 aagccactga ggtaattaaa aatgtatttt ccatctccta gtaattgaat tgtgtacaag
      181 ctgcaagtta atgaggtcat ctaccctcga gcactgacag gaaagcagga ataattatct
      241 ttcaattttt tcttatgtag caattaattt taaccattcg cctacactcc actcccactt
      301 ccctcactcc agtcagtcaa agtcacagct aagccgaatt gacaagcaat tgatacggca
      361 gcggcacaga gccaccgagg cgggcaaggt aatcaagg
//
LOCUS       KCKM01002348            1174 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36897apa ultra-conserved element locus
            uce-1956, sequence.
ACCESSION   KCKM01002348
VERSION     KCKM01002348.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1174)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1174)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1174
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36897apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1174
                     /note="ultra-conserved element locus uce-1956"
BASE COUNT          339 a          202 c          232 g          401 t
ORIGIN      
        1 tatttttggc tgactctgcc accgattttc attatgtgtg tcactattac taccgtataa
       61 tctgaacata aaaaacatgg tgctgtaaca aatgacttca cagcattgac agttatagca
      121 ggactatttc aaggctgatg aaaaatttcc tgagagatct cgggtcaggt ttacataagc
      181 taaacaggaa atgattgcca ccattcacat taaaacctaa atgttttgtg taacttcatc
      241 tacatttatg ttcctgcgtg tctctctgtc gttctcagct gatgaaattt cacacttcct
      301 tagattagag aaataagttc atgtttcgtg gtttgttgta gctctgcaag gtttgggatt
      361 ttaaatagat tatttagaag acaacaaaaa gttccttcag tttttgattg tttaaatttt
      421 acatactttg taaattttta tgatacctgg gggtttgtta ctgctttttc ccaacggact
      481 actaatggaa gttagcctgt ctagcccatg tgctagatgc tgttaggata aaactgcctt
      541 tgactttcac acctctcagg ggacgagtaa ttgttgtgtt caaacagcct gtaattgtga
      601 tcccgctggc tttctcagta cgcttctggc tattagaatc attaaacaac tcagcacctg
      661 ttaacagcat tgtaaatatt caaccctgct tgtgtgcagg ttgagtccaa tataggggaa
      721 ggcttacaga gcccaggctc ataaattaga gcttctgaca agtcaattat tgtgaagctg
      781 ggcttcactg tgaaataaat gaaatggtgt gctgataaaa aggtaggctg tctgtttata
      841 gcaaagggga aataatgact agatgattca atgcagtgag catgaaactg cattgttttt
      901 attctttatc tgtaattaaa tagttaggta atgtagcttc atagaggaac tcagatacga
      961 tgcagttttt attcttggag cataccgaca tgcaaaattc aacttgcatt tatgctggca
     1021 cattcaaaat gatgtctaat gataatgata cctctgtttt cactaatgat tttaagatag
     1081 tcgttctaga tgaatggctt tgctttttat taggggaaaa tgtgctgagt gaccaagaag
     1141 ttcctgttca tgtgctcaaa attatattta ctcc
//
LOCUS       KCKM01002349            1021 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36913apa ultra-conserved element locus
            uce-5155, sequence.
ACCESSION   KCKM01002349
VERSION     KCKM01002349.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1021)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1021)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1021
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36913apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1021
                     /note="ultra-conserved element locus uce-5155"
BASE COUNT          303 a          217 c          183 g          318 t
ORIGIN      
        1 taggcagtgg tgattgcctc ttgcgaaagt cagtagtttt ctagaactct aacatatttt
       61 ctcccactgt ctttactgtg taattcagca atctaacgtc aggacattgc tcatcaggat
      121 gtccttacca taatgaacaa aacacacaaa cagaggtatc tatcaggaaa aaaaaaagag
      181 atgtttctac tagaaggaaa gcattcaaat tgcctgatag tttatgctgt ttggtccctt
      241 tgagcaaaga cagatacaat ttcaagcttg acattcaggt agccgttcta cagttgatct
      301 catttgtttc ttccaaacaa aagaacattt tgtagttgtc tccctccttt agccccacac
      361 attcttctac taaggtaaat catcaaatcc aaatcccggg ttaatgagtg ccaatcatag
      421 cttcagcccc ttttccaggc ttggcaacaa gttccccgag ccttagcaaa caattatcat
      481 tcagctactg tagaaattga ttcttgggtt gacgagagca gtcctccctc ggctggtaag
      541 gtcctgccat gggaagcaat tactgcaaga tgccagctga cagactcatt ccgtggaaag
      601 tcaggttgtc ttgatcctca ggcactctct aggcaaattg tatccttaca ctcatctcaa
      661 acctcttacg aactgttggc ttctatcagg aaaaatggat tgttcccttt gtttctgtgg
      721 catttgatag aataaaactg gacatcctgc ctgcacaata aggagattta attttaaaat
      781 tctcacacca aaatgctgca gtatgataag aaaaagagaa tcataaagca atgaagattg
      841 ctacttgcct agggaacagt aatacagcac agctagtgtg ataaaaagac ccaaattcca
      901 ctagcagtgg cctgtcttta ctgattataa ttttctttct tttcaaatgg attttggtaa
      961 cgcttccaca tcaccttgtc tgatatattt tgtttattaa ttttgttttg gattatttat
     1021 a
//
LOCUS       KCKM01002350             343 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36928apa ultra-conserved element locus
            uce-1535, sequence.
ACCESSION   KCKM01002350
VERSION     KCKM01002350.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 343)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 343)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36928apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>343
                     /note="ultra-conserved element locus uce-1535"
BASE COUNT           91 a           72 c           59 g          121 t
ORIGIN      
        1 agttatgggc accctgctga cttaggaaaa taagccttac tacccagtca ggcatttaat
       61 gtggatgtta aatcatttgt gattactaat gtctaagtac tttgtcattg ccaagctctc
      121 attttccatg agagcaattc taattgattt aaatggtctg tttcgccttg gtgcacgcat
      181 gatcacgtcg taagtggtct ttaggactat tttaattgcc aaggatgttt ttccttaaga
      241 aaatctctgt gcccagagca gaacaaatta ttattgcaat ctacaaatac acaaacattg
      301 tttttctccc ctctctgcat gttttgttac accagcctct ctt
//
LOCUS       KCKM01002351            1038 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36943apa ultra-conserved element locus
            uce-3723, sequence.
ACCESSION   KCKM01002351
VERSION     KCKM01002351.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1038)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1038)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1038
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36943apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1038
                     /note="ultra-conserved element locus uce-3723"
BASE COUNT          287 a          202 c          205 g          344 t
ORIGIN      
        1 tctgttaatt aaaactggac ttgcttgctg ccattgctat atttgaggta tggttgatat
       61 tttaatttta catgttagtt agtttttgaa ggcttctgct ctccttggat gactactaat
      121 aaattaatgg tataaagcag aacaacatta gactttgcgt cactgatccg aagacggttt
      181 aatgtgaatt tgttgggacg tgaggtttta aaggctttac tgaagaaact ggagtaaagc
      241 tgaaagcatg gctgcaaagc aaagaacccc aactttgttt agatactttc tcatgttaac
      301 tgctaacctg taacctgcat gtaaaaagga aattgtcagt ttttgtggaa atgacacctc
      361 taacctttcc ctttgctagc acggcaattc tactctgttt tccactctct ttggcctaac
      421 ctttgcttgt gatgcatttg agcatgtaga aattaagggg gttttgctct taactttggt
      481 agttcaaaaa tggggcacag atgaagttgc tgcttggctg gatctgctca gtttgggaga
      541 gtacaaagaa atcttcatca gccatgacat ccgaggctct gagcttttac atctggaaag
      601 gcgagacctt aaggtatttc ctttgtgcta cttttctgct attgaccatt ttctttgaca
      661 aaacaacaac caacttttct tcttcccctg cacttgttat gtgcttgtag cttggcttac
      721 actgtgcaaa tatgcaataa actaatacgc gctgtccttt ggcctgaatt tctgaagtgc
      781 taacttgtac tcgcaaccaa aaatatctat gttatccgaa atttccttct tcccaatttg
      841 tgtagaatga tagcatcata gtttatatgg gaacacagga gaagcacatt tgatatctca
      901 ctgacatcag tgtaatataa tgttatcttc aggagttcac cacttccatt aaacagaatc
      961 agtatggatc aactgcaggt ggtgataaca attctgaatc tatctacggc aagctcagca
     1021 gctatgagca gctgacct
//
LOCUS       KCKM01002352             493 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36959apa ultra-conserved element locus
            uce-5211, sequence.
ACCESSION   KCKM01002352
VERSION     KCKM01002352.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 493)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 493)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36959apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>493
                     /note="ultra-conserved element locus uce-5211"
BASE COUNT          153 a           95 c          100 g          145 t
ORIGIN      
        1 agactctatt agtcgtgact agaaaagttc ccaaattaaa agctgccaca caggtttcct
       61 gaactgtgga tagatatagc tttgcagcca gtaagatgtt tttggtagaa ccactgactc
      121 actgcactgc tggtttaccg ggcaggtaaa gcatacttct acattatctc tttgaaagag
      181 gaacaggaca caacctctgc cagcattttt tgtgaactat tctattaata ccaatcaaat
      241 tgagaaaatg atcaaatgaa attgcatttt gagaatcata agctgtgtaa tgcctattct
      301 gttaaattga ggcccataat tgcttctcta ctgaaaagat acaacaaaga cagcaatcat
      361 ggcatgtcat tatcccagac tagaaaaccg gcctttgcag tgaggacttc aaaggcttgt
      421 ggttctcgaa ttgcatttgg ctgctattgt tgaagcgcag gcaatcttga ttaggtgttt
      481 acactaaggt aag
//
LOCUS       KCKM01002353             878 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 36975apa ultra-conserved element locus
            uce-4829, sequence.
ACCESSION   KCKM01002353
VERSION     KCKM01002353.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 878)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 878)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..878
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36975apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>878
                     /note="ultra-conserved element locus uce-4829"
BASE COUNT          278 a          173 c          178 g          249 t
ORIGIN      
        1 tgaaagtact tctgcattca aaataaacag cccttaagac aagtgtcttc tgggggtttt
       61 agtcacttta gtcaacttct gagaacaacg ctactaacca gtggtgaaaa ccagactttg
      121 ctccctaagt gttagggcga actcatgaaa gttgaattct ttgattgttc ttcagctttg
      181 caccctgatg ccatctgctt gtttcaaatc cgtttcctcc tcttgttcag tgcactcgta
      241 attctttctt tctaaagcag tttgctgtag tttgggggtg aggggggcgt taacttagaa
      301 atctcgtagc aggaactcaa aatttagtga tgtaagcaag aaatagaaat gccatagcca
      361 ctgaagagaa gacatgcggc attgcttact taaagcccca tcctgtcccc ccaaggacaa
      421 tagctgctac caggatggca ccagcgatgg agcctattat aagattggtg gcactaggac
      481 ctgtgataaa ggattatggt aagacagaca taagaaccaa ccactttatt cacattaagt
      541 gaagcaactg aagggtattc aaacaattca aggaatacag acagcacaca aggtgatgtc
      601 tctagacaat ttcagtaagc ccaacttcct ttcctttaac agtgagcgtg aacaaagctg
      661 ttggtctctg cgttatgcta tgttgacttc taccatagat aaaaatctag tattagacag
      721 taaattccat tgtgactcac accattatct agtgaataaa ctgtcagctg aggacactaa
      781 gatatttgtg aataatttat tagtttaaag caagaagtat gagtgctgta tgctttatga
      841 ctacagcaaa tgagaaagaa aaaaaaaaag cctaactt
//
LOCUS       KCKM01002354             352 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37005apa ultra-conserved element locus
            uce-1143, sequence.
ACCESSION   KCKM01002354
VERSION     KCKM01002354.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 352)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 352)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37005apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>352
                     /note="ultra-conserved element locus uce-1143"
BASE COUNT          107 a           58 c           81 g          106 t
ORIGIN      
        1 gtatatcccc tgatcgcacc tttaggagat tatcccgtca ttaaatattt gtaggataac
       61 aggagaagcc taatttagtt tttgtttctt tttctctgtg gtttaatcac agatgaaaga
      121 gactaatagc actacagagc tttctggtga tcaaaggcca atcaatcctc tttgtggagt
      181 aattaactat ttgctaaact tgcagaattg atttccattt agggctaaga gagagggttt
      241 taaatgaaga ccgatttacc aggcgtgagg aaggaatctc agcactgatg ccaggagata
      301 ctcagagtga tgaattggag cctgctaatt ggaggatgaa aaatacagct gg
//
LOCUS       KCKM01002355             434 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37021apa ultra-conserved element locus
            uce-3744, sequence.
ACCESSION   KCKM01002355
VERSION     KCKM01002355.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 434)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 434)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37021apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>434
                     /note="ultra-conserved element locus uce-3744"
BASE COUNT          138 a           81 c           80 g          135 t
ORIGIN      
        1 ttttaatttt tttttgtatc aacagtttta aaaatcactt aaaatccaca taaaagtaca
       61 gtatgtggga ttcaaataaa ctcaaatggc ctactaatgc actagcgtgt gtgtaattat
      121 ttttaaatct agttgcacaa caatgaactc tgcttttcat cttaatctca tggaggagaa
      181 gagatttctg tggtcttggt aaaatgcaat ccacgccagg cttggactag tctggccacc
      241 caggtttgcc ttttcatata tctgatagat gtgttttgac aagttatatt aagtacaaag
      301 caggccacca gagcagcatg tggagttgat atagacagag gcagaaaggc aaataatagt
      361 atgaacacac ttttgtaggc aatatttgcc ataactgagc acccctcatg catcatctta
      421 ccacacttca tgga
//
LOCUS       KCKM01002356             851 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37035apa ultra-conserved element locus
            uce-5528, sequence.
ACCESSION   KCKM01002356
VERSION     KCKM01002356.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 851)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 851)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..851
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37035apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>851
                     /note="ultra-conserved element locus uce-5528"
BASE COUNT          275 a          148 c          161 g          267 t
ORIGIN      
        1 tgtagctctg acctgcattt aaaacagggc tgtttagctt tttgagcacc taaagttggt
       61 tctgttgttt gcatttcata gaaactactt ttgaaagtaa acaagaacct ttagtgaatt
      121 atttagcata caaataaacc agcaaagaag cctaagtagg ccaatatgaa ctaactggat
      181 tgaaatattc atctgtaaat aacttttcaa tctgctgctt tcacgtacaa atactacatg
      241 gaacattaga cacaactagc ttctagggat atttaggctc actggagagc aatttttatg
      301 tctactggca tctgtgggta gtgatatgga ctgactgtta atataaccaa cataaaattt
      361 atgtgaacac tcactgcaat agcaacacac tgtcagacag ctggtggttg atgcgtagca
      421 catgcggatt ttatatgcgc tgtgtaaact aacctttgca ataaagattt agcaggttta
      481 ttagtttagg aaatcgctat aattaaggat aattcataat ggccgcttac ccactctata
      541 gcaatagctg ctttaattta gactctgttt ctctgagccg taaataagtg tgctgatgtc
      601 ttctgcacag atgtggcatt caacctgttc aagttggttg agttttgctt gtgttttaat
      661 caaaataatt agtagatgaa cccataaaat gcactttgct caaaataaat tagcaagaaa
      721 tgtggtttgg aagttccgaa actctactag tagccctttt tggggaggaa ggagtaaaat
      781 acaaatattt tccacaaaaa aggaacactc tatatggtca cagatctgac ctgagacaga
      841 atacccaatt t
//
LOCUS       KCKM01002357             842 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37051apa ultra-conserved element locus
            uce-6471, sequence.
ACCESSION   KCKM01002357
VERSION     KCKM01002357.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 842)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 842)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..842
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37051apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>842
                     /note="ultra-conserved element locus uce-6471"
BASE COUNT          278 a          129 c          136 g          299 t
ORIGIN      
        1 tagtaactaa aagcatagat ttttttctcc gttaattata aggtaataca gtctgaaaag
       61 aaagtgaaat ataatattgt tgcaccccag ggaagatgat atacaaaatg gaagagctca
      121 gttactttgt ctcagttatt tttctttagg tgttaatttg ccaaagtatt tctaaatgat
      181 ttcttataat ttgagtattg taatctggta tttggtaagc ttttatgaag aactttaaaa
      241 atatcacttg taaatgttta ctcactgttt catgtttgat cttttttgta caatccttac
      301 accaaagctg gaatttattt tcaatggcta catataaatg cagcacacgc tctgcgtcct
      361 aacagatgcc atctgtaaaa gcatttactt taaattagtg gaataagtaa tcaaaagggc
      421 tttgtactta atgcagaact tttggtgact attaaatgct cattagaggg tgtttttgct
      481 gtatgactgt caaaatcagc aggacattta tgttagattt cctgagtggg tcaagattga
      541 atatgatttt gcaacttaaa taacataaat gaatgcaggt tatttcagaa tctccagatg
      601 ttccttaaac tccctgcccc taagcgaaac ttatagccaa tttaaatttt gcagcaatat
      661 tacagtgcag atttttgctt caaacattta acaactctat tattacattc cactcatttc
      721 tgccttaacc atcaaaaatt aaagagacga acaatattat attggaggtt tctctcttta
      781 aaacatgcat tagtaaatgg tttggaacag tctattataa aaaggctttt agtgggacaa
      841 aa
//
LOCUS       KCKM01002358             771 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37065apa ultra-conserved element locus
            uce-2077, sequence.
ACCESSION   KCKM01002358
VERSION     KCKM01002358.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 771)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 771)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..771
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37065apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>771
                     /note="ultra-conserved element locus uce-2077"
BASE COUNT          247 a          136 c          156 g          232 t
ORIGIN      
        1 atttccctgc gatttcatac gctctcgtaa tgacgagagt cctttcttcc ttgtcctatg
       61 gtagctcgga gagaagacac aggctgagac tggccagaag taggctgctt gtagcatctt
      121 atccagtgcc tcaggcaaga ctgtacagac agactcagtc aagacggatg tgtgaactcg
      181 tgtggatgta tttctgggtt ttgttcctct ctttgaatat aatcttttta gtgctgagct
      241 aattatgtag tctcagtttt actgttgagt tagagtacct gatcaacttt ccaactgtaa
      301 aacagtttga aaatcaaatg tagcttacat gcaagaccca acaaaattag aagtgttaag
      361 tacgttttgg cagttcactt ttattatgcc cagtcctcaa atgtaccagc agacaatcat
      421 ctgaatgtta gttatttttc acatgcttat gtgatcacac aaaaagtaca tgctaaaaag
      481 aagcagatgg tgacagatgg ggaaggttga ataaggtggt tttggaaacc tagaaaaatg
      541 cacttctgta atagtgtaaa aataaaaaat ctttgatcgc caagttagaa tgaacaaaat
      601 agtgcccccc caaaaaaaaa cacacccgaa aaaactttac tgataaaaag aaatggaact
      661 acaagcgttc aatgtgtatt taagaacgta tgttatatgt gttgtccaag gatagaacat
      721 tagtttttat cagccagaga cttggaaaga cagtagttgt attctttttt c
//
LOCUS       KCKM01002359             791 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37080apa ultra-conserved element locus
            uce-1471, sequence.
ACCESSION   KCKM01002359
VERSION     KCKM01002359.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 791)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 791)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..791
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37080apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>791
                     /note="ultra-conserved element locus uce-1471"
BASE COUNT          187 a          227 c          152 g          225 t
ORIGIN      
        1 ctacttttaa tttgcaataa caccacagca gagagatgca agaatgactg ctttccaacc
       61 ctcccttcca caacaagccg ggccacatct ttccctttcc acctctatct ccttccaccc
      121 cctcttcaac ccctcccatt ttaaacccag tccaagacaa cacattatct caactccccc
      181 caccccaaac taatcaaagg atgagctaag ggagggctct ttagaacgga tgcctctgca
      241 accctctcct ctcctgcaat aatcaggtga attaatgacc ctgaagttaa agtgagcgct
      301 gatactcagg cgttgcgcag cgtaggggag aaagccttca ttgttttcga gcaggaggcg
      361 ggcagcagca agggagattc atggatggag attgaatatg caattttctt tcaccttgcc
      421 aagagctgcc cctgggctgt gcctggccta aatttttttt ttcctcttgc catctctgcc
      481 ttatccgtcc ctcccacctc ccttccattc tttccagaaa attaccttca aaattgattt
      541 ccacttttac aaacaaatat aatgggaaca tgagggggga aaaaaatctt gggctgtgat
      601 gaattagggc tgtcaggtgc ttccaagtct cctttgtttt tgttttactg cccgttaggt
      661 tctttgtttt tccggcaact gggaatagtg cccctgccca tacagtccct atggtctgtg
      721 gctaccatcg caggatatgt ccatcacctg atgtcatcac tgcgttatcc ctgctctcca
      781 tcgctgcgat g
//
LOCUS       KCKM01002360            1207 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37096apa ultra-conserved element locus
            uce-6166, sequence.
ACCESSION   KCKM01002360
VERSION     KCKM01002360.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1207)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1207)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1207
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37096apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1207
                     /note="ultra-conserved element locus uce-6166"
BASE COUNT          371 a          223 c          227 g          386 t
ORIGIN      
        1 aaaagaacat cctgatgcta tcagttattc ttatttgcat gtaaactctg atattaggat
       61 tcatttttga gcatgtcact ttttagctcc taattaattg caatgacagg actgtgtgcg
      121 tctgtttata ggaaagatgc tgttgtggct gaggttttaa ttatattaaa tattaatcat
      181 ggattgaaat tggaaacctt aaattattgt ttaatgatca atgatcaaac gcataatcaa
      241 gataaagaaa attaggatgg cagacagcaa catcacaatt tgaattttac attattagtc
      301 ttctgcctaa ctaggcactt ttcttgaata tctgaactgt tttgcctttt aactgtgctt
      361 gcagttgcta tagtgatggc ataatttcgt aatggtctaa aaatgacact ggcatagata
      421 ctgacagata ggaattaatt cactaacaag taattatgta gcgaaatgtt gactgccatg
      481 cagaaggtgc actgtgacac atttactgtt tttcagggat ggcagtaaca ttagcgttgg
      541 tcattagtgg tagacatctc cgtacagtgt tagatacaga cttatatgca gacctattta
      601 gttacctgtg tgacagcctt gttcaggaca ccagaaacag ctgtcctagc ctgtatgagc
      661 caaaataatt aggcctgtca tcttctcgct ctgatttccc cttcaacctg ctccacaaaa
      721 tgcaaatatt ttgctttcat tgtcacattc accttgacat ggatattgct ttggcgcata
      781 actggatgag atgactcaga atttgcattg ttcattctaa taaatttgct tcccctctac
      841 tgcatggcag gacccatcag ataaagtctc ccagagtgtc atcaatcaac atcgctgaca
      901 gacggctttt gccttcattt gttacatacg agaacatgct taattatttg tcctgtaatt
      961 agttgggaaa atgtcaggaa atgtcaactc tctgttcact ctggaagggc tctgcttgaa
     1021 agccacaatg actgaagtgt cattaatgct gcctaacaag acgaggatca gctgggggaa
     1081 agtgaaagct tctaaaaaag taatcatggc aagttaagga aaactgcaaa tcagcaccaa
     1141 taataagatg tgaatcctat tagcaaacag ttatattttt catctgttac tcctcacaat
     1201 aaaaata
//
LOCUS       KCKM01002361            1059 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37111apa ultra-conserved element locus
            uce-3542, sequence.
ACCESSION   KCKM01002361
VERSION     KCKM01002361.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1059)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1059)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1059
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37111apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1059
                     /note="ultra-conserved element locus uce-3542"
BASE COUNT          314 a          187 c          203 g          355 t
ORIGIN      
        1 atcatgggtg ctggattaaa gtacttctcc caccatgtgt aatatttttc ctgacttgtt
       61 cgcatttaca taggctatat ttagaacagg tatggtacta gctgaatgac aagaatagga
      121 aacaaataat gtaaacactt tatgtgattt ctctaatttg gaaagagatt agatctccaa
      181 ttagtaacag acaccttctc ctatcatatt tcctaaagga tgtttgtaac aggataactt
      241 ttctgatgtt agaaagtaag aggacttagt tccttcccca aaagctagga acagtattca
      301 gaaatttaca gtaaatggca attcatcctt tagaaatccc ttcaacctag tactagagtt
      361 gctgccagag atctgaatgc ttttgcctaa atctctgtaa tccaataagc ttttgtgttt
      421 agcagcttgt tttgaaactt gtatagcacc ccagcctgtg tctccgtatg ttcgtttgca
      481 ggcaggtgag tgcccgaggg cctgattatt attcaagcca ggaggccttc acagccccaa
      541 ccagaatgta atttgtaatt aactgtcatt tacttctgtc tgcactgact tgttgttcaa
      601 aagacaatgt atctgagctg gtcagtagct tctctttgtt gtggatatga tgtctctcag
      661 atctagttgt attcgtaatt tttagaaaac caagtacttg cactcttgaa actaaagtgg
      721 gaaagggatt tcactgattt ttcctaaata aataaggtac gtgcaattat gaacacttgg
      781 gtatgtaaaa tgaagtattt gatgctttgg gatgagtttc taagcagaag agtgaagttc
      841 atgtgtgaca tatttaattg aactccatta gggatacagc cttcataatt tgaacctatt
      901 atagctgaga tctgtaaaat gaaagtgcat atttaagttg tgggaatttt tcttaaccca
      961 ttttaaacgt tccaacagta tttcctcaca gaagcaggac cactaatgta ttctgtggat
     1021 gtacccatat catgaatttg taattgtccc catggtaat
//
LOCUS       KCKM01002362             477 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37126apa ultra-conserved element locus
            uce-7667, sequence.
ACCESSION   KCKM01002362
VERSION     KCKM01002362.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 477)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 477)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37126apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>477
                     /note="ultra-conserved element locus uce-7667"
BASE COUNT          147 a           77 c           95 g          158 t
ORIGIN      
        1 ataaggggaa ctacaagtaa acattattaa ttataaaaaa aaatttgctt aaattagttt
       61 tttttcacac ctgcttcttt cttaattagc tagtagtcca catatttcag tcagttgaac
      121 tctttagtat ttattcaagc atacttgaca ttaacatact gtttgatgtt tgatatcctg
      181 agtttttaat ttaaccacat gacaacaaat ggtatttatg aaatatcagt gagctggaaa
      241 aatatcctgt gttgcagttg tgcgctgtag tgagctgaaa gctgtttcct tttggaggtt
      301 ttagaagggc ttaaacgcac aggggggaat acgtgcctcg tactgatacc cctacttttt
      361 atccttagca agatttatgg gccgctgggg gtgcaaagct accaagagag tagcagggct
      421 gctgtaagat ctgggaagaa acacaaaaat actttttaca tgatgtcata agctata
//
LOCUS       KCKM01002363             769 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37142apa ultra-conserved element locus
            uce-3937, sequence.
ACCESSION   KCKM01002363
VERSION     KCKM01002363.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 769)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 769)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..769
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37142apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>769
                     /note="ultra-conserved element locus uce-3937"
BASE COUNT          286 a          159 c          131 g          193 t
ORIGIN      
        1 acctcacccc tccccttcca atccccctaa ggaaataaca ttagcactaa tttctataat
       61 gccagccaag atatgcacaa gcaagtaaga gaaatcgaaa gcatttgcta aaatgtttgt
      121 aacaaatagt tatgtacaaa aaaaattcac aaaagactag ttcccccttg aagcagagca
      181 catggcagtt gacactggaa cagatacaac cactggctgg gattataaac cacgtactga
      241 tccagaggaa gaaaaaagtt acatgtagtg gagatttttg ttttgaacat tgaacattta
      301 ccaaagtttg gcaacattac cttttaaatt atgcaaatta tgtaaacaag aggaacattt
      361 caaatcgatc tacatgcaaa acttcatgtc atgcaaggac accaagcacc tggatttctc
      421 tctcacagac agagcccatg atgtgcagca ctcagttgaa ggaacagcta tggcagacag
      481 gtgctcgact gaagcaggtt tagacaacct gcgcttccca ctgctgatta taaaacaatt
      541 tttttcaata gaaaaactac tatacaggaa agatgtactg tcctaaaaaa tctaccaaat
      601 gtttttcttc cagccaatag taccattgca gaaaagggaa gggatgatat aaagttgtaa
      661 aacatggctc gctactttta tatcacacaa atatatcaag ttaccatccg ttacaaatta
      721 tgatatggac aaatctagaa aagaaaaaaa ttccccaggc aaaggactg
//
LOCUS       KCKM01002364             907 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37158apa ultra-conserved element locus
            uce-791, sequence.
ACCESSION   KCKM01002364
VERSION     KCKM01002364.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 907)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 907)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..907
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37158apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>907
                     /note="ultra-conserved element locus uce-791"
BASE COUNT          269 a          193 c          158 g          287 t
ORIGIN      
        1 atggtctatt tcatggcctc attaagtgaa caatgtcaga tctttagaaa gagctttctg
       61 tgattcttgc actgggctag taatatatgt cacaacagat atatatagaa aagtaaagga
      121 gcacagaaat gtgctgtatg gttggacccc aaaggaaaga gctagaacat ttcttctttc
      181 accctctact ctgaatcctt gcaataatta gccaaagtaa aatgaatatt agcttatgct
      241 taactgcctt ttcagcgtgt tactctgcat tgacccagta gtgctaaacc aattattttt
      301 tgaactttat ggctttaaat aatcctctgc tctaaaactc cctctacccc tcagctactt
      361 aaccacaggc ccgactgccc taaatccttt tcttatactt tgtagctttt taagcaagcc
      421 ccctctttaa gtagacataa tcccttctct gtagaaaaca tgaaagacct tgaacaaatc
      481 aagatttctc catggagaat tcagctaatc ctgtgcttag ctcctaacaa ggaaatccat
      541 ctcaccacca agcaccccat tactagaact aatgcctgac ttgaataaca agcacattat
      601 tgtgctttaa ttgtagcact gctctgtcac atggagaatt tggagaggaa cgtgactggg
      661 ctcctccagg aaagacaggt cacgcctttt tgttgttgtt caggtttctg tgatttaaaa
      721 gcagactaaa ttaactatta atatggactg cacatgcttc agattagatg aaacagctgc
      781 aatgtagctt tgtagtacac tttattataa aacaagtgct gttacactga attactattc
      841 tcctttacat tgtcttttga ctgttgtgaa atttgcatgc tggagcttga aggggtataa
      901 tcgtgcc
//
LOCUS       KCKM01002365             424 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37174apa ultra-conserved element locus
            uce-2399, sequence.
ACCESSION   KCKM01002365
VERSION     KCKM01002365.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 424)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 424)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37174apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>424
                     /note="ultra-conserved element locus uce-2399"
BASE COUNT          116 a           96 c          116 g           96 t
ORIGIN      
        1 atgagctctc aaggctggat gaggaggtct gtgatgcttg gccccaaagg ctcaccccag
       61 caggaacttc tagtgtggcg atggtggagc ctgtgcgacc ctgggatgcg aggtgagctg
      121 agcgccaagg gaggaccaga gctcaggggc ttccccggct tgcaggatct ttcatcctcc
      181 gtcaccacaa agccgggcca gatctgcatt tgcagcagcc cacagaagct gcctctgttg
      241 tcttattttt gttatttttg agaggatatt ttagcactga gcacattccc tcctgttgcc
      301 atggcagccg tgacaggggt tatataccgt gagaaaaata gcaaaattaa tgagtgagtg
      361 aaagtgcagc cgagagaaaa acaaggttaa aaaaagagtt aaaacagtaa taaaaacaat
      421 ctcc
//
LOCUS       KCKM01002366             859 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37190apa ultra-conserved element locus
            uce-2465, sequence.
ACCESSION   KCKM01002366
VERSION     KCKM01002366.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 859)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 859)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..859
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37190apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>859
                     /note="ultra-conserved element locus uce-2465"
BASE COUNT          243 a          234 c          191 g          191 t
ORIGIN      
        1 ccagtagggc ttagagcaaa atgagaaggt taaaacacag catttccccc actcagtagg
       61 caaagacacc cctgtggatg cacggggacg cagatgccaa gcgctactcg cgtacgggag
      121 cttggaatcg ctgcagacac aagcaacatg gggcagcaga gagaaaagcc tgcctgagcc
      181 tggcagtgct gtcatcacag cctggagcct cttctactcc aataagctcc tgctccccac
      241 ttcccctttt ccaattccga aattcttaaa ggaaaaaaaa ccaacaacaa aaaaccacat
      301 tgtgatggtg caactccagc caaccctggc caattccatc acagctacct aaactctgta
      361 tccaaatttc ccttacgcaa cggacaactc cggctttatc gacacagtct gaactcgaag
      421 cgatttttct gttgataccc agctcctacc tattcgagta ttggcaaata catcagctag
      481 tgacccactg gtccctttgc cttctccatg ggaaagtgta gaagatgctg atgaagatgt
      541 ggatgacccc tgaatagatc ggttgatcca agactcagca ttctgtaagc tctgatgcaa
      601 tgcagcagaa agagcagctt ggcgccttag cgacccctcg tcctcggatg cggaagacgt
      661 gtctgtgtgg aagcagaaaa gaaaatctag ctgcttaggg aaaagcacat cgcacggaac
      721 atgctctctt tccaattcac atatcaacag cacaggcttc tcataggagg attttttttt
      781 cacaggcggt gtcaaacgaa gttacattgg ccaaaccaga ggttaaagca gcagacgtct
      841 cccccccggg ggtttttcc
//
LOCUS       KCKM01002367             426 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37206apa ultra-conserved element locus
            uce-2964, sequence.
ACCESSION   KCKM01002367
VERSION     KCKM01002367.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 426)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 426)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37206apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>426
                     /note="ultra-conserved element locus uce-2964"
BASE COUNT          116 a           71 c          119 g          120 t
ORIGIN      
        1 ttatgaaggt ggcagattcc ttcttgactt agaagtgaag ggaaggtacg gaagggcaca
       61 gaacagagtg tgctggggcc aacaacggcc tgacttgatc aacttcaacg ggcattagat
      121 caggccttta atgaccgttt gcatgtggac tggtgtgagt aggctgagag gggatgtggt
      181 ctatggcagg atcactgcag agaaagaatg gtgctttact gggggtggaa aatggaattg
      241 tcaccgtgga atgaatgaat tgtacagttt ctcttttgta acccagggaa taattaagat
      301 agatgggtag atgaattagc tgtcctgcaa ggtcagaagt ggattgcctt attactctat
      361 tatttcactg ttgtggaact atcaccacta acgccttttt catgatattt tgtacatcgc
      421 accaag
//
LOCUS       KCKM01002368             807 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37221apa ultra-conserved element locus
            uce-4320, sequence.
ACCESSION   KCKM01002368
VERSION     KCKM01002368.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 807)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 807)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..807
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37221apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>807
                     /note="ultra-conserved element locus uce-4320"
BASE COUNT          197 a          153 c          230 g          227 t
ORIGIN      
        1 ttctccagtg tttctgtcag gtgtgtcttc tctgtgtgct ccttggcgag gtttgcatgc
       61 tgggttttta aagtcaacag tgctgtgtga tgatgcataa cagaaaacag ggatttacca
      121 aaaatccttg atgcgtaaac aaaagctttt tttaaatgca catgtgtgtt ttgaactgat
      181 attatggaaa aaaatagttt gttgtcccac cagattccct tattgaacaa tattggcatt
      241 aaataaaaga gctgaatcat agggtgactt ctttatttct tcttactggc tctggttgta
      301 tgtgatcatg tgtcaacaga gcattcattg ggttagtcat ttctggacca gtgtagggtc
      361 acttgggatt cacagggcta ggattatacc ctctcttcac agcaatgcca attgtaggcc
      421 ttatacagat gagagcactg agtgagaaat aaagtgcatg gtggatgaaa ggcttaactg
      481 aatcgctttc agcccattgt tagtccaggg gagcttagcg gggatgagag ggcagcagcc
      541 cgctttgaaa tttgcttgaa caagtgaata ggagctcccc ataaagccga gcgtgaaagg
      601 agcctgcctg ttttttcctg ccgtaacaat ggcccgcgca ggctgtgaga gtttggggaa
      661 gcttggctga ttaaactgcc cgcagctcca ggttgggggg cggcggggag cctttgggga
      721 cggcggaggt tgcgaaggga cgtttcctgc tccagaaggc atccccggag cttggtggaa
      781 gcgggagagg taaattggca gtggtgg
//
LOCUS       KCKM01002369             561 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37237apa ultra-conserved element locus
            uce-4189, sequence.
ACCESSION   KCKM01002369
VERSION     KCKM01002369.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 561)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 561)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37237apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>561
                     /note="ultra-conserved element locus uce-4189"
BASE COUNT          190 a          124 c           95 g          152 t
ORIGIN      
        1 ttccaaggga tttttatatt agcctgtaat taaataatag ttcatgttgc ctccttctac
       61 tgggaatttc atccttttca cctctcctct gctaaagcag agacatccat tacgatgagt
      121 agctacaaca cttgtcagat ccaatcagcc ccaaacaact gaagagcaac tgacgtgtgc
      181 tctcttaaag catggtttct tctcccccaa cagcccactg tcctttcgcg tgcatgtaac
      241 agtcagaaga gatcacatca cacagtgaag aaaaacagaa gcatatggta ctaaggggcc
      301 tctgcaggag atggctaaaa tgccaaggct tgcacgtaaa caaaatatat gcaaaaatat
      361 gtgttcatat agaatgccag ataaaagcag atgacaaaaa gagcatagaa atgcaaaatt
      421 ttgccatcat tacagttacc tcagattttt cattattttt gtctaaagag gtgcataaaa
      481 aatagcaatc acaggcacct aattatgcat aagcagctgc aaagttcact cttctagtat
      541 aatatcaagc cacatactct t
//
LOCUS       KCKM01002370             289 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37253apa ultra-conserved element locus
            uce-4848, sequence.
ACCESSION   KCKM01002370
VERSION     KCKM01002370.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 289)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 289)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37253apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>289
                     /note="ultra-conserved element locus uce-4848"
BASE COUNT           91 a           41 c           50 g          107 t
ORIGIN      
        1 acttacatta agggtctaat ctctcctgaa caatagctat gttagcttga atacatagtg
       61 agaaatctgt tccattaatt aagtgctgcc tgtactgctc ggatttgtag caaatgttaa
      121 tggatttttt ttttcttcct ctgttggaca attactttat tttgccaagt tgctaatgga
      181 ttaaaattga aaaggtctgt gcgttaaaaa aaagacttta gctttaaagt tctaagaaat
      241 gccttgcata taacagtgga aaatacctat atattgatat tattaatgg
//
LOCUS       KCKM01002371             826 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37268apa ultra-conserved element locus
            uce-7078, sequence.
ACCESSION   KCKM01002371
VERSION     KCKM01002371.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 826)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 826)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..826
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37268apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>826
                     /note="ultra-conserved element locus uce-7078"
BASE COUNT          223 a          165 c          175 g          263 t
ORIGIN      
        1 ccactgatcc aggaatcaac acatttggga tttttttaaa ggctcgggac ctcttaacgg
       61 taaagatctc attgaaggag gtttttcagc aatggaaaaa aaccataggc ctgcgagttt
      121 gaatcccgtg atgcatcgct ccttgaagtt acatctgctc ttctctttca tctctcctct
      181 tgttaactgg gagctgtcac attaggaggt gaattggtgg ctcctcccca cctcccagtg
      241 ccttttcact ttcttttagt gtgtaaattg ttggcagggt ggctgggccc ataaaaacgg
      301 gaatgcatag ggaacacaga ggggagcaca gttagaggaa aaacagtttg ggaattaagg
      361 tcattaattt tccactttca agggctgcca cacagacaga gataaagtca gcataaatat
      421 tccgctgaag tttcgctgtt tttctcctct cccttttttt ccattgccag cccatttatc
      481 tccatgctgt caattagagg caaaagcaaa gaactaatta ggaactgtgc aattttaatt
      541 agctgttttg ataattaaac taattggttc ccttgtgttt ccgcaatgtg cgcagagcac
      601 ttttttgata tctgggctgc agatttccca tccgttggtt aattagtcac ttttgcatta
      661 aaaaggagcc tttcttaata gccttaattt gcagttgaaa agagaatcta ccgtcaataa
      721 tttgtgtaat tggtaactgt ttgattgtaa tttagaagca cagccggaca gctctgcatg
      781 cctaattcct aatgactagg attaaagttg gattaaatgt tgggaa
//
LOCUS       KCKM01002372             746 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37282apa ultra-conserved element locus
            uce-666, sequence.
ACCESSION   KCKM01002372
VERSION     KCKM01002372.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 746)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 746)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..746
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37282apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>746
                     /note="ultra-conserved element locus uce-666"
BASE COUNT          258 a          136 c          120 g          232 t
ORIGIN      
        1 aaatctcctt tcccttaggt attatatgtc tatcttattt atgcttataa atatgcaaac
       61 ttaaactcct attaaatgtt atataagaaa aaaaatgtaa aaatattaac ctctgcttca
      121 atgtacagtt tccagaatct gccagaactg gggaactggg caacaaggcg ttcataggtc
      181 ttccgtgctt tgtctatagg ttgattctaa aaattgaaaa tcaaaacagc atttacaata
      241 ttatgattta tgtaaacaat tatgctgatt ttactccaga acccaatagt gtgagtggac
      301 catagataac gaaatgtaat cctatgtcac taaacctgtg cctctcgaat gagaatgctc
      361 caagcgtcaa ggtcatatgg attttcttct agtttctttt cagctttctt cactttttct
      421 gggacatatt cagcagccta gaaaaattaa aagaagacat aagagatcac aagcagagat
      481 tgtaaagttc tgtctcagct acaagtcaag ctaacaacaa cactctgaca atttaacatt
      541 ccagacctca gtagttacta aattgtaatc ttatcgggaa aacaagttgt ccaagtgaga
      601 taatgcagta tggtaagagt tcgacatatt tggtgattca gcaaaaaagc tagactaaac
      661 tgcctacatg tttctaaaac acaagcacaa acttgagctt gccagaacat ttattgcagt
      721 atggttttta aacagttaca ctaatt
//
LOCUS       KCKM01002373             589 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37296apa ultra-conserved element locus
            uce-4560, sequence.
ACCESSION   KCKM01002373
VERSION     KCKM01002373.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 589)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 589)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37296apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>589
                     /note="ultra-conserved element locus uce-4560"
BASE COUNT          179 a          108 c           97 g          205 t
ORIGIN      
        1 ctcactcctg caatgtcctt aagcaaacat tttccttttc tttctgtcaa actaaggaac
       61 tttgttagca acaccatagg acaggagata actatatagc tctctaattg ttaagctctt
      121 gcaagggctg agcctgatca ttcaccgaat tgttgagttg atgggattcg tgtagctggt
      181 tataaattga taatctaaat taattcattc aagcagaaat cgattttgta actccttgag
      241 agcttgtaat aatgcttacc tcctaccgtt agctgcattc tccgtttcat aaagctggtc
      301 ggaaacagct ggattcaggt gacctgctag ctcattaaat ctgttacatg ttccttctgg
      361 taaatgatat taagctgaaa tgtccttgcg ttgatttttt tcctttaatt ttatgacaga
      421 aataacctaa tttgtaacac aaaataacaa tctccttgga ttactttgcc ttgttaaaat
      481 attttatgca tttttcattt acacgaaggt aatggaaaaa cacttaaact atctgttatt
      541 taaaccacaa gagatatgtt actgaaagtc tgatagctgc aaaaatgat
//
LOCUS       KCKM01002374             464 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37312apa ultra-conserved element locus
            uce-1825, sequence.
ACCESSION   KCKM01002374
VERSION     KCKM01002374.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 464)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 464)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37312apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>464
                     /note="ultra-conserved element locus uce-1825"
BASE COUNT          168 a           68 c           89 g          139 t
ORIGIN      
        1 atgtgcagat aaaggaaata gctaaggata taatcttgtt ttcagaattg tttggtacat
       61 ctgatggagg caacaaaata gaaggaaaat ttatgaatat catagatgga aaaatgaggt
      121 caagataatt aaaagtctct ctgtcttcca aagataatct aacttactgc tcagtggctg
      181 tcacagtcat ttcagggttc acctatagtg tgcaatgtgt atgaacttaa ttaagtacta
      241 agaggtaatg aattggaatt ttttgcttag tactattttt cttcagagca tgcaaaccca
      301 taaatcgtgc aaagctgtca aaaggaaata cctactccac tagtgatgtg gaggaaaaca
      361 gatgccactt attcaataaa ctaatatcca cacagaagaa aaatgttgac tagatacctc
      421 agagtcaaag ttggtttgaa agtttgtcaa tacagaattt tatg
//
LOCUS       KCKM01002375            1054 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37327apa ultra-conserved element locus
            uce-6543, sequence.
ACCESSION   KCKM01002375
VERSION     KCKM01002375.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1054)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1054)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1054
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37327apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1054
                     /note="ultra-conserved element locus uce-6543"
BASE COUNT          331 a          183 c          194 g          346 t
ORIGIN      
        1 tccagaaggg ctctcagtcc tcctcaaagt gacaaaagta aagctgaaaa agggctgaga
       61 aaggcaagct gttacagcag aataagctta ttaacataga gggttaaacc catacaattt
      121 taatggctat cattcacatc atttatccct atgcttatgt agccattctg tgtagagaag
      181 ttcttttaag tgagcactta gggttagaaa aattctgcct tcattagggt gtacgtgcat
      241 ataacttaga gataaatctc tgcatcctaa taagtgcctg ccaagaagac aaagaccatg
      301 gcgagcccca ggaatggtct ttcaggttcc atgtgctgaa cgcttctcgt gagcagcctc
      361 agacactcat ccctgctgag gaaaggctgt gtggtatgtc catccagaag cttagatttt
      421 gtaggtttcc aattgccgtc cactttgtat gagatttcag atttcatccc ttgtcaagac
      481 ttcaaacctg gtcttttaga tatcaatcaa aagcacattt tctaccctgt cctcatttac
      541 atttatctaa tgcttaaggt catttgtgat catttgagtg tatttcagca tatggaatca
      601 gtgaataata gatttcagca tcacgctgtg aagaaagatt gtgtttttac aagacatgat
      661 gttgtttact gggtgttaat aatcactaat taataaacat atctagacat cataaaatgt
      721 tgcattttaa ggagtaaaaa tgtcaagtgt ttaacttctt gagtgcaaca gcatttgggg
      781 ccttatttgc ataaatgaaa taatcaagtt acaaaataaa gtgaaggatt atgtcaaaac
      841 ataaggctca ttatgataaa ctcgtatttg atttttagtt ctgcattcct agggcttttg
      901 cagatttatt gtaacagtgt taagttttag aaaataagta ttcaaatgac tctctaatac
      961 caaaaataat tatcatcgtg caattttctg tcttatacac attaatagtt gatttctcct
     1021 gtcaaaacta agattatgct ttggttattg agaa
//
LOCUS       KCKM01002376             846 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37342apa ultra-conserved element locus
            uce-4249, sequence.
ACCESSION   KCKM01002376
VERSION     KCKM01002376.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 846)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 846)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..846
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37342apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>846
                     /note="ultra-conserved element locus uce-4249"
BASE COUNT          248 a          181 c          204 g          213 t
ORIGIN      
        1 tgcagatact ttctgagaca aacccactca agggcttaaa atgtttcaag cgaggtgagg
       61 agatgaagcc tgcagggagg gcaagggaaa gaacacgaat tctcaaaaaa ttacgttgac
      121 ttcagcactc aaaccaggat tttattaggt atctataaat ggattttaag taggattttc
      181 ccatgttttc tcgcaaagct gatttaaaat ctaatattat tagattggtc acagccttca
      241 tattttaact gtcaaaccca aagcctgaaa ggtgattcat tcaaagcttg ctaaaatatt
      301 tgctcagcag cacaatagtg tgtgatggaa aataaactcc tctagagcat ctcaccctat
      361 cagccatggc ctgcagcagg aaaagaatga gggaaggtca gtcaattatg tgtggtaatc
      421 accgtaagca tattatctga gacacagatg tcttccctga ccccacacga catagctatt
      481 aaccccacag tagtataaaa atggggagga ggaggagccg gtcccctagg taaaccagac
      541 cttttcagtc aaggcttgtc cagcagctca gtgaagttgg cggcagcggc aagagtgctg
      601 tggcgggaag ctggccccgt gcgcggcggg cagcacggcc gcctctcctc ttcggggacc
      661 tttctataga cctagtcatg tgagataaat agttgcatca tcggaaaaat gagaccggca
      721 aattgactcg tgagatattt cgggagcgta aacagccctg gaatgccgga tgctgcccgt
      781 gtttttatgg gaacaacttt tgtgttcctg agtacactta cacagttgac gtattagtgc
      841 tgataa
//
LOCUS       KCKM01002377             414 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37357apa ultra-conserved element locus
            uce-3116, sequence.
ACCESSION   KCKM01002377
VERSION     KCKM01002377.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 414)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 414)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37357apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>414
                     /note="ultra-conserved element locus uce-3116"
BASE COUNT          131 a           86 c           73 g          124 t
ORIGIN      
        1 ttccgtttgc ctacacatcc tccaagtcct agccctagct tttaactgca gtccctggaa
       61 caagagggga aaaaaatcgt ttatggctta aaaaatccaa atggctgatt tggtgtgtgt
      121 atgttataag aatgcactca caacaacaaa aaagtcactt ctctgtcccc caccgtacag
      181 cagaagaata ataaaaaagc tttatatttt tgcagtgggt attcaaagat aatttgatgc
      241 cattgtttct gctacagatg gttcttttta atacaataac actgctcttt gtgcatacta
      301 cacacaataa aaatcgaaag cgttctcctg aataaccatt ttgttctcgc ttgtatacag
      361 gccaacaaaa gctgccgtga ggtaatgggt tctgtttatt gaagccacag aata
//
LOCUS       KCKM01002378            1207 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37373apa ultra-conserved element locus
            uce-3548, sequence.
ACCESSION   KCKM01002378
VERSION     KCKM01002378.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1207)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1207)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1207
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37373apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1207
                     /note="ultra-conserved element locus uce-3548"
BASE COUNT          339 a          236 c          257 g          375 t
ORIGIN      
        1 tattggtctc tttctttgtc ttcttgaagt agttagtctt tttagattat aaagccagaa
       61 gggaccattg tgatcatcaa atatgacctc ttgcttagca caggccatag gctctgctga
      121 attaattcct gtctgaacta gagcatatct tttcgaaagt caacttctca cttcccagaa
      181 tatgaaaagg tctcccatga tacctataga cctttcataa tggacagatt cttcccatga
      241 cacagacaaa ttgagttttt tcttgggagg tactgcccca ctctgagctg ataaaggaag
      301 acccgggaac tataggtacg ctgtgattac ttcttttgca ctctgtgatg ttccaggagc
      361 ttgtgcatct tctgctttat gagatatact tggcctaggg gagctaagtg gaaggatgag
      421 ggagaagagg aggtacataa tggtatggcc tccagcacta ttatttatga cagtatcctt
      481 ccagcaatct gtgcctgcat agggtgaagg catggtttca attctgccct tgaaacatgg
      541 attaagcaat gttgctaata catatttgtc cctgcggctg tcaaacattt cactgatact
      601 agactctgta gacagcttaa tagctaggtc ttctgtcaat gttactgcag cagtgtctcc
      661 tttgctttaa gatgctgttc agatttattc aagcaatagg tgtagcatag tgcttggtaa
      721 atagcagcac ctgactgtat acttgtatca tcactgcttc ctgacatccc aagtgaccag
      781 atgaaatgga tagactatgg aaaccaagtg ctgagaagaa tccagtgagc aaaagttgga
      841 aagatcatct gtctcattcc tattttgtgc ctcctagcag aggtacatgc acaatatgct
      901 attattctag aagtctctga acaatagcta ccatctgcag gagttgaaag tgtgtgtgtc
      961 caacaatgtt ggaagaacgg ttttataacc accactggca tgatgcttta ctggtgctga
     1021 tgcagtctaa gtgttgctgg ttttcgtata acagtatttt acataggacc tcatttaatt
     1081 tttttggata ctagagactg aaattagctg tgcaaagata agcaccgaaa gcattatggt
     1141 gtgtgcccac acatgatggc aatatttttc tacccattga aaagcaaaat acaattgaag
     1201 gattaca
//
LOCUS       KCKM01002379             544 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37389apa ultra-conserved element locus
            uce-542, sequence.
ACCESSION   KCKM01002379
VERSION     KCKM01002379.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 544)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 544)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..544
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37389apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>544
                     /note="ultra-conserved element locus uce-542"
BASE COUNT          156 a          106 c          122 g          160 t
ORIGIN      
        1 taactgtggg cagccacaaa tattctttat atctgaaaga gttccatgag aaagtgtgtt
       61 gggagtgagc agcagggtgg acaaaggtga aaataaggga agaaaattaa tctgcatacc
      121 cagcaggcag tggtcattta tatattcatc tgttttcagc actgaactta gtaagagtgt
      181 gtccatttca tggtgccgtg cagagaaaat gaagtgtgta aggtcattca ataaagatta
      241 aattaaaaac atattcctat agcaccctca gggtccatta gccttgatga gtgtacaaat
      301 actttctttg ttatatgtgc tccatcctga aagggattgt gtgcttctct cattataaat
      361 gtgcacctga aaagattgaa cattatcccc tcttttttaa ctgacctgtg gccaccgctg
      421 ggttcattag tgcagaacat cttttccact ggctgagcct gccctattgt ttgcactggc
      481 cagggtcaag tcaagggcac tcagcctaga ttggactcat ttgtcacagg gtctagcaac
      541 aaag
//
LOCUS       KCKM01002380             398 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37404apa ultra-conserved element locus
            uce-7776, sequence.
ACCESSION   KCKM01002380
VERSION     KCKM01002380.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 398)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 398)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37404apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>398
                     /note="ultra-conserved element locus uce-7776"
BASE COUNT           94 a          123 c          115 g           66 t
ORIGIN      
        1 gcatgctgca gcccggcggg aagaaatcaa taaatctcta ccaaaacgca caaagcttaa
       61 ccaaaccgag aagttcaacg gctacggcac ggtaaggggc atgcagcacg tctggaaggg
      121 cagcgaactc gaggcggcgg cgggagcagc gccacccggc ggctcatgca gggatgcagc
      181 ggtacctttc tgaagaggac gacttctcag agttaactga catcagcagc tcaatcttct
      241 gcttgatttc tggaaaaatc agaaaatatt cacaaccgag accgcctgcc ctcgccttcc
      301 gaagccctat caagcgcccg gctcggtgtc ccgcagccct tttgttcggc aggaggccgc
      361 ggcggacgcg ctgctcgttc cggggccggc ccagccgc
//
LOCUS       KCKM01002381            1053 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37420apa ultra-conserved element locus
            uce-6664, sequence.
ACCESSION   KCKM01002381
VERSION     KCKM01002381.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1053)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1053)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1053
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37420apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1053
                     /note="ultra-conserved element locus uce-6664"
BASE COUNT          275 a          215 c          230 g          333 t
ORIGIN      
        1 acaaagcagc cttcatgctt gctcccgagc ggaaatttgt gtgcgattag ccctttctgc
       61 tttgtgccga gtttacacag cgttagcaat acgttgttcc taccccaccc ctgctctgga
      121 gatacttttc attttcctat agggccagtt caagggttgg aacagagact tccagggttt
      181 gaggggagag caataaacag aaggaattga gagaaagaag ttatccagat atcacttttc
      241 cttccatgga ataaaactgt ttcataaatc ctgcaatggc tacgaaattc atcgtgcctc
      301 agaaaaaaaa ggtgttttaa tttagtgctt gcctttttat gttcctgttt ggaaaacagt
      361 atgcttaacc cgaaagttag gctttggtag gtggagggtg cagaggaatt gatcagcgat
      421 gggtttacag agcacaaatc tgtttggcaa ggaagtcgct gaaaactgtg gagtagatgc
      481 tgcagagagt acctttatga ttgatttcca ttcaagtcag actgactgca gtgtggtcat
      541 ttttctaacc cataactgct cacactgcag cagtctgcta tctgcagggt gtctgaatta
      601 tagcagtcca tgtccgtgtt accttttaca caaattactt acaccggttt ctttttccat
      661 gcaaattcat cagttttaca gcctcttgga gctgctgtca ggaagctgtt gcagaaagca
      721 caaattgata aaacaagtta attttactgt gcttaatttt tccttctctc tgttaacaca
      781 ccctctcaca gcgtgcagga agcgtatgat agttaagaga agataacaaa ggatttgagt
      841 gttcttgtca taaattactt cccaacttgg ttgcttttaa tgatccttcc agattttctt
      901 aagttttaat ggcgttgtgt attttccgtc ccgtgctttt aaaagcccgt ggctgtccag
      961 gctgttgcct ttctgtctcg atgacgttct taaaagatcc ttgccaaaca acaactaatt
     1021 gtcttgtggg gatgatgagg cagctgcaaa gct
//
LOCUS       KCKM01002382             921 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37436apa ultra-conserved element locus
            uce-2560, sequence.
ACCESSION   KCKM01002382
VERSION     KCKM01002382.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 921)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 921)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..921
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37436apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>921
                     /note="ultra-conserved element locus uce-2560"
BASE COUNT          245 a          156 c          197 g          323 t
ORIGIN      
        1 gaagagggag gaggggacag gggatagtag ccagtagcta acagctttct agtctgtgtc
       61 ttccttcatg aagtttatct tctgtgcagg gatggctgtt tgtggtggct ggtaagtcac
      121 atactttatg gtacttgagt gaagctttca agctcattga caacttgctt tagatatagc
      181 tgtttacata tctcaggcaa ctgagatagt cgagcatctg aatctggtca tagtattcta
      241 actttattaa agttactttt aaatatggtt aactgttatc atagcaggcg gtatatttgt
      301 gagggtaaaa ctggtcgggt ttttttacac tgtatctctc ctgcagccag actgttgatc
      361 ttctcatgca agagtcagga tgtcgtttag aacatccttc tgctaccaaa ttccgcaatc
      421 atgtcatgga aggagaatgg gataaggtaa cgtagggctt ataggactgt attaaccact
      481 gtttaaattt atagtatctg tgagagaact aaaaatccac cctccttata tacttttttg
      541 ttgtttgttt ttttcccctt atgcccattt ctgcaggctg agaacgacct gaatgaactt
      601 aaggccttag tgcattctcc gcatgcaatt gtggtaagag gcgcacttga actgtttcag
      661 agctgtatag ttggactaat tgtagtggtg caatctttag ccatggaatt ggttgtccat
      721 agttcttgtt ttcttttttg tttactttaa gcagcttgca tgctatctca aacgtcatac
      781 taatctgaac ttttttattc ttttttagaa tgtgagatag gaagctctaa agtattgagg
      841 ctaatatttg atgtagtgaa tgtttaaact ctgttaaaca tacttagctg ataaaatata
      901 aatcctgcaa cagtcctaaa a
//
LOCUS       KCKM01002383             438 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37451apa ultra-conserved element locus
            uce-2737, sequence.
ACCESSION   KCKM01002383
VERSION     KCKM01002383.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 438)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 438)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37451apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>438
                     /note="ultra-conserved element locus uce-2737"
BASE COUNT          134 a           88 c           83 g          133 t
ORIGIN      
        1 agttcatttc atgagagagc accaaaaggc tgaagtgatt tgtggtggtc tcaggagtct
       61 ctgccagcta tgatgtatat aaaaggaatt ttttattctg gttgtaacca taggcagtaa
      121 tgtttatagt aggtgaacat attagcttgg acgcagggca tgaattttac tctagaaaaa
      181 gccagttcat ttatacagcc taagagttaa atgtcggtat ttgaagacaa attataggga
      241 aattcattta aacccatgtt atgtggcaga atataaaaac agacagtcct atctttatca
      301 attttttaca gccctcttaa ttcactttgc ttccagcaac ccgttcccca caaaactgat
      361 tttaccctct tctccctcca gctagaacaa ggaatgaata ccctaatctg ccttggggca
      421 cacaactgat ggccatgc
//
LOCUS       KCKM01002384             892 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37466apa ultra-conserved element locus
            uce-4136, sequence.
ACCESSION   KCKM01002384
VERSION     KCKM01002384.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 892)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 892)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..892
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37466apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>892
                     /note="ultra-conserved element locus uce-4136"
BASE COUNT          251 a          172 c          223 g          246 t
ORIGIN      
        1 acagacagaa ataatgtcaa gcagtgcccc ttatctcagg atgttgtaat gtagctgctg
       61 taagcccttg cctggagacg agataagagc aaccttacaa gcttgtgggg gagcgaggag
      121 gggggccagc agtgccattg ctgggacaac aatggcagag ctgtcacttg cacattatga
      181 ctctttctgg tgccaaggaa atatatgtat gctgagtggt gaataacaag cacgaaaata
      241 aaagtcccga atgttcatct aataatgatg tatttgtaac aggattatac tgtccaatga
      301 tattctttct ttatctcctc actaaatggt ggggcagctg tgtgctttgg cacggcatga
      361 tgtcctttct tttgtgtgct gcatattaat cctttattga agtaattaaa tgtgtgctta
      421 atggcaatga gctggcagaa tgaacgtaca attgaattag cagttatgat ggggaccatg
      481 ctacaagatg aactaaatgc aattactgta ggcatttttc tccaagtcga atctggctac
      541 atgacatgac ttaattacag gttgttagac acactctctg atatcgtagt ggtgcatgtg
      601 gaggcacagc ttcgacactg ctgtgcacct gtaacacgtg cacaggcacc catttactaa
      661 gagatttagc ctggtgaaag ggtcagtgcg gattcctgat gttgctacag gcagctctca
      721 gctgtggtgg gagatgcaga ttaaaaaaca gacaaaaaac aagagtaagg tcagagctct
      781 gctgctggga atctgagggg gtctttgatc agctcctcat ctggtagcca ccttcctttc
      841 ttaagagata cctgctcttt cttgaggaca agtggacaaa gagcaagtag aa
//
LOCUS       KCKM01002385             866 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37482apa ultra-conserved element locus
            uce-6929, sequence.
ACCESSION   KCKM01002385
VERSION     KCKM01002385.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 866)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 866)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..866
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37482apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>866
                     /note="ultra-conserved element locus uce-6929"
BASE COUNT          260 a          134 c          141 g          331 t
ORIGIN      
        1 attatagaat acagcatgtg aaaattgtga ttgaatttat atttttaaga ttaaaaatca
       61 ctgcctttta tcttacgaga taaatatcct gctggtaatc aaacactgta aataagactt
      121 gtgattttta gagattgtta tgctagttat cttataaatc tgagttgtat gccaaactgt
      181 ttaagccatt taagatcata ctgtttcttt tttgcatgtt gcaaattaga cagttcatgg
      241 ttatttctta gatatgttga tcataaagga tatctaacag attttccagt acttagctgt
      301 accacttgct tctttctctt ttcttcttgt ctatgatgta taattaatca tagattactt
      361 cattttgttt catttcattt acaacattta tgagcttcac tttgtcggta tgaaatggtt
      421 gtccccttct ttcctttcca aagtggcgta attagtgtta gcatcttttt taacaggcta
      481 cataaagttt agtggctgga ttaaatcaag tcattaacat aatgtgctat acaatttgcc
      541 cctatctctt ttcgtttcca gtacatcaaa gtgccacaga gtgccagtgt aattgggcct
      601 tgctagcttg tcaggttcag tcaggctgat ggctgctgct tttactaaaa agcttccagg
      661 catgataatt aatagagaaa agaagtctga gaaatgtaaa agtttggaca gttctctatg
      721 aatatttcat acatttgaat aatcagaagt taacattatc aatttgatgt ataatacatt
      781 gattaaaagc cttgtttcag atcctgaaaa tagacatcaa aactgagaat ttgcattttc
      841 tttggcatgg tctttatgtt taaaaa
//
LOCUS       KCKM01002386             723 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37497apa ultra-conserved element locus
            uce-6219, sequence.
ACCESSION   KCKM01002386
VERSION     KCKM01002386.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 723)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 723)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..723
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37497apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>723
                     /note="ultra-conserved element locus uce-6219"
BASE COUNT          246 a          173 c          166 g          138 t
ORIGIN      
        1 atgctgtccg tgaagcagcc tagtcccgca acctccccta ctccatcttc agacaggctc
       61 aagccacctc cttctgaaag tgtgaagcct ccttcatctg gacaaaaatc tatgctggaa
      121 aaattcaagc tagttaatgc taggactgct ctgagacctc ctttgtcgct gagctcagga
      181 cccagtgaca gtgggagaga ggatgatacc ttctcggagt gtggtgaaat ggatgtctta
      241 agcagtgggg tgaacagcgg cggctccacg agtagcagtc ctaaagtatc acccaagtta
      301 acccctccaa aagctggaag caaaaatctc agcaataaaa agtctttgct acagccaaag
      361 gacaaagagg aaaagaacag ggacaaaaac aaagtttgca ctgagaaaac agtcaaggaa
      421 gagaaggacc aggtcactga aacatctaca aagaagagct caaaaattgc aagcttaatc
      481 ccaaagggaa gcaagacagc agcagccaag aaggaaagtt taataccatc ttctagtggg
      541 atcccgaaac caggatcaaa ggtgccaaca gcaaagcaga gcacttcatc tgcctgcaca
      601 ggaagtaagg aggttgaaaa actgaggact acaaaaggaa accagtccca accaacacca
      661 aaatctcaat ttagcgagaa ggcttctcct tcctctggtc ttgcttcttc tgaagggaaa
      721 gac
//
LOCUS       KCKM01002387             626 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37513apa ultra-conserved element locus
            uce-1693, sequence.
ACCESSION   KCKM01002387
VERSION     KCKM01002387.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 626)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 626)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..626
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37513apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>626
                     /note="ultra-conserved element locus uce-1693"
BASE COUNT          177 a          123 c          130 g          196 t
ORIGIN      
        1 aactgattct tgatagataa gcttttttta aatccacctc tttgctgcaa gtcaggattt
       61 taaaaataaa tttccccttt aaatctcttg agcgattttc attttttgca aggccgcact
      121 gctggtgtcc tggaaaaatg gagagttaga gctttatcag ttggtgccct gaggtatgtg
      181 gcaaagaagc taaatccttg aagattagca aaaaaaatgc agcacatggc aataaggggc
      241 ttatatgact actagtatta gttcaggtga aagaagtatt gcttatacat aaaactggac
      301 aaatccactg acaatgtatt tttagttagc tacaaaggag tcttatattg ctggacttta
      361 cctctttggt gatttgggaa gcttagtaat ccactgtaaa tgctcttctg ctggccacaa
      421 ttcccagtat tactccagaa tgctgctctt tcgttttaac ccctaaaagt acatgtttcc
      481 ttaatttagc ttttagatca cacaattact tacttagcca gcggtcgtgc tgtaagagca
      541 aatgatcaag ttaccgctcg gatgcttaaa cctgccccgg cgcggctgcg tcggaggcgt
      601 aagcgcaacc tggaagatga gtttgt
//
LOCUS       KCKM01002388             424 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37529apa ultra-conserved element locus
            uce-7317, sequence.
ACCESSION   KCKM01002388
VERSION     KCKM01002388.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 424)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 424)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37529apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>424
                     /note="ultra-conserved element locus uce-7317"
BASE COUNT          128 a           67 c           74 g          155 t
ORIGIN      
        1 tataatgcat ggaaaaatgc tacagatttc acagataatc tcgtgtacac tataaaaaca
       61 tggttcgaca atttgttatg cagtcctcag atgaatccct ggatatgaat tccgttttca
      121 ttgtcggagt gttttagtag tattatatag aacttcaatg tctttgtgga cattgttgtg
      181 aaattggtga cttaatgtct agctatcata tgtctttttg caagacagtt aggaagagta
      241 tgtacagtat ataattgcta aatgatttaa gtatgacact tgcatttgct gatgcttaat
      301 gagaccctac tatctgctct ttgctcctat tacttcatag cctttttaat ctatcaagta
      361 ttacagcagt acagtgttct atctttacat caaaacacat tgaattgatt ttagggcata
      421 aaag
//
LOCUS       KCKM01002389             800 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37544apa ultra-conserved element locus
            uce-6636, sequence.
ACCESSION   KCKM01002389
VERSION     KCKM01002389.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 800)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 800)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..800
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37544apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>800
                     /note="ultra-conserved element locus uce-6636"
BASE COUNT          229 a          169 c          111 g          291 t
ORIGIN      
        1 actactctct caaatggagt ttcctgatat tttaaatgaa tggtggggtt tattttggca
       61 gcagcatcac ataactaatg tttcatatta cacacaaaaa ttatttgggt gccattcttt
      121 aaataaaatg tttcatttca ataaaagctt gtaattgtaa cacttaaatg ctatcgttaa
      181 tagcaaaaag aaagttcccc cagcaacatt aaagagtgaa cttccccgct ctttcctcta
      241 ttacagccaa tgtcttttta ttgtctgttt tcatctccat tttactttat ctgccaaact
      301 actttgcatt tcaagacatt tccactcacc ttgagttctt ggttcaaaaa gaaacaataa
      361 agtttaatct tttcacttga caatgatgta tgggtctgct gaaaagcact tttcaggtat
      421 tatcattaaa aagtctccct ttttttagtt tctcttcaac tcttgataca cagagaaata
      481 caagatgtca tgcatgcaag agcttttatc aaagcttcta ataataccac ttaattagaa
      541 actaaagcct gctaatgttc cttctgagag ctcctcagag tagtctttcc ctagccttac
      601 tcattcctct tcaactaaca ttgtctaatg actttattag tgatttcaaa ggctagcaaa
      661 ggctaccact ccactctttt ctttccagat tacatcttgc tggtcaggga atttgctgag
      721 ctctaccatc acgcaactgg tttgaattag gatttctttt ttttcccctc tcttgcagtt
      781 agctacttat tagcatttgt
//
LOCUS       KCKM01002390             946 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37560apa ultra-conserved element locus
            uce-4089, sequence.
ACCESSION   KCKM01002390
VERSION     KCKM01002390.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 946)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 946)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..946
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37560apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>946
                     /note="ultra-conserved element locus uce-4089"
BASE COUNT          262 a          184 c          181 g          319 t
ORIGIN      
        1 tattctggac atttcaaagt ttattccgtg tacacgcatc atctgtgcgg tattttcagc
       61 tatttctcgt gcatcccatg tggtggattt actgcatgtt gcacatattt ctgcctggga
      121 attctagaaa gaaaacaagg atgctctctc ttttgagaat accttctacc ttctttggct
      181 agaaaggcat gttattaagg gcttcagtta aatctgcggt tgtggttctt caaatgaact
      241 tgcagtttag cagggcatac acgttttcat agcacagtta tcaggaacta cagcttagaa
      301 gctcaaaggc tgcgcgttgg gctctactgg tccagaagta tttgtagggg agaatgtaac
      361 actgtcttta ttactaggat cagtcaagat ctggctctca tcgcacggga aatcaacgat
      421 gtagcaggag agatagattc agtgacttca tcaggcactg cccccagtac cacagtaagc
      481 actgctgcca ccacccctgg ctctgccata gacactagag aagaggtagg agatcttcat
      541 ggagaaatgc ataaggttct tccttttctt tatttctttt gcttttagca ttttgcatag
      601 cctattttta gttatttcac tcaacccgta tgcatgatct ctatgttgtt ttttgattta
      661 aagttccttt acatctcaac aaatgaagaa attattgtat gaacacatag aatgtctaaa
      721 ggatgcatat tatctgtctg tctctttttt tccacgaaac ataggacaac atagttcttt
      781 gtttcttgct tgtctgtagc cttagatacc attggatggt atctaagtgc atttaaaaat
      841 actagtttct atgcacaaat atatataaat gtatgcgttt agtacttaac atagctatta
      901 aaaagaaaaa aagccctttt ttcacaggtg acaaaagttt catctt
//
LOCUS       KCKM01002391             916 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37576apa ultra-conserved element locus
            uce-3353, sequence.
ACCESSION   KCKM01002391
VERSION     KCKM01002391.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 916)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 916)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..916
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37576apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>916
                     /note="ultra-conserved element locus uce-3353"
BASE COUNT          297 a          189 c          149 g          281 t
ORIGIN      
        1 tttgttttgt tggttttctt tattaaacta agcctcaaga agttttcact ttgttgctaa
       61 caaatgcctt ttttaatcaa gcctcagaca aagcagccag caaatgcatt tattattaaa
      121 acaaacttct ttaaaaattc aaatcttggc ttattaaaaa atataataaa gacttttatg
      181 tagtttagta tgcaagagtt agattgcttg acctctcttt taatgactta attagctgta
      241 ctaaagccca gctgggcctc tgctgacaac atagctagat atttcaatca ggcagtgtta
      301 tggagaataa gtaataaatg ctaccttgtc gccatacagt cccaaaccaa agtgcatgct
      361 ggtaatgcta aatttgatca gtatgcctca tatttcaatt agtcgtggtc tgaatcacta
      421 aaactgtgta atgtgtatga attcctgata tcagatacag agctacaggc tcccacagtt
      481 agaacccgtt gagtttgctt ttattagcag ccaattaatg gccgaaatct gcattgcttt
      541 taaaatttat aacctctatt ccagctgcat ccatggctcc tagtacactg tatacaatca
      601 gatccatatc attgtcgcaa gtcaaacagc tgcaaactgt attctgtctg cagaactgaa
      661 aaatccttct atacagaagc ttttttttaa cctcttagaa gttcttttca aagcccggca
      721 gcactagtca ctttgcgaca atgagcgatt taatacagaa agaaagaaat ctacaccaag
      781 gtaacctctt gggatgtgct aggttttcaa acgaatgaaa ccctatcact ttggcacagc
      841 acaagggcaa gcaaagccac ttctcctgac caaggctaag aaaatataaa catataaaac
      901 ccgaccctca ttgaaa
//
LOCUS       KCKM01002392             926 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37592apa ultra-conserved element locus
            uce-6351, sequence.
ACCESSION   KCKM01002392
VERSION     KCKM01002392.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 926)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 926)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..926
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37592apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>926
                     /note="ultra-conserved element locus uce-6351"
BASE COUNT          266 a          173 c          218 g          269 t
ORIGIN      
        1 cagcactgtg ttgcactgct gctgccctca cttgctgtga agtgcaaaag gcagggcagc
       61 aattaggcaa gttcacccct atgaacaagc tgtgttttac tgatggtcat tgtcacctac
      121 tgcattcact acatccagcc aaaaagggga aaaaaaaaca atataacaaa tagttttaac
      181 tcagcactgg gataaaggct atttttgatt ttacctttcg ctttttaatt gtacgccaat
      241 aattttgtaa tagagttgcc aatggcaaac atgcaaaaga cattaacttt atttatgttt
      301 tggattatta atgtagctgt taaaattcct ccagttagtt ttgattgaat tgtttttttg
      361 tgcgattctg tcgtttaatg gagcggtaaa taagaatttc tgataatgag cccaagcatc
      421 tgtcacaaca acctggcgcc ggttattaac atttccatta acggcagggt gggcagtgat
      481 aatatggaaa ccacacagtt agaacaaaat aaatagttgg tgtcaggctg agtgggtgtt
      541 aattactatt ttattttata actctggggg gagggagtat tggtagaaaa gtgtgactta
      601 tgaaggtcat tcttgctaaa ggaagaactc tccagaggac cagatagccg gggctatcta
      661 acttgagtag tgaatgtttt atcacttcta tttatggccc ataaaggggc agagagaaaa
      721 gaggcagctt tctaaggtgg cctgggtgaa ggctacagaa ctgtgaacac ggagaaagac
      781 gcagcgtacc ctttgctctg cctttctctt ccctcttctg gagtttgaac gggacacgct
      841 tgggcacctt ttctgcaagc agaacacgtg ctgttttgtt aagacctgcc ggaggcagag
      901 acagcaggtc gggaaaacag accgtc
//
LOCUS       KCKM01002393             688 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37607apa ultra-conserved element locus
            uce-7721, sequence.
ACCESSION   KCKM01002393
VERSION     KCKM01002393.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 688)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 688)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..688
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37607apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>688
                     /note="ultra-conserved element locus uce-7721"
BASE COUNT          204 a          162 c          164 g          158 t
ORIGIN      
        1 ccacaggaag agaaggatag tcatttctga actctccagt ttcaaatcag catcgttcag
       61 ttattggcaa atgtaggtat tggccccgat tggttttctc agctgccccc ccctcaaaaa
      121 aaaaaaaaaa aataacagaa aagccttaaa ctctcacctt ggatctgaaa tcgaccagat
      181 ttgttgtcca tttttcagtg ataaaaaata ataaaaagca ttacgggctg tttaaccgag
      241 agaagcccta attgattccc acagtaatta acctgcattt tacctcggag agtggtagtt
      301 aaggaagtcg gcactgctat ttataactca tctcaaattg agggcagact gcctaaaatc
      361 taacacatcc cagctgtact cctgtttgaa ctggggccaa gggaattttt taaagcaatc
      421 ttggcactga atgaatgaca ccaacagtat gagcgcgcgt gtggttgtgt tgtggtgacg
      481 tagcagcgga ggtggaaggg gaaggggggc caacgcgccg taatccctct cccgagcccg
      541 ctcgccgcgt acaggctcgg ccccggctgg gaacaacgca ttggagccgc ccaccgagaa
      601 gcaaacacag gaaacgtctt ttcctgtgga agggccttga agtgagaaag cacatggcta
      661 atctgcataa aagcaaagcc acgcagct
//
LOCUS       KCKM01002394             972 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37623apa ultra-conserved element locus
            uce-1363, sequence.
ACCESSION   KCKM01002394
VERSION     KCKM01002394.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 972)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 972)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..972
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37623apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>972
                     /note="ultra-conserved element locus uce-1363"
BASE COUNT          330 a          162 c          194 g          286 t
ORIGIN      
        1 aaatgacata ccatgttttg cactattctt ttttcgtaac aataactgtg gaatccactt
       61 tgtagtatgt accagcatac catgcatgtg atgcctgaac catcttctga gctatgggtt
      121 agctgaagtg gcacaaacag ctccaactta cctgtttttc tctaccagtc actgcgaaaa
      181 caagcagctt aggagaagca gatctctaaa atttgtaccc attagagggg aaagacctgg
      241 gtgaaaacaa atggtttata ttttcagcca gaaataaata aggcatagac tatggctctc
      301 tcatctacca gtgagtttta ttaaagagtt agagaaagct ttagtttaca agatattcag
      361 aaccatatgt atgcattaaa ggaacgtgga ggaggaggag gggatctgag aaaataacaa
      421 agcagcagtg tatgcgtgca atgatttttc attctgtttc gcttcagctc tgcccctgca
      481 acagaggatc taatcaatct gccggctatt aagtttgtta attgataatg catactaatt
      541 aggctgtgcg cagttactta agagactttg ctaaggtgat tgtaggcaca agtccaaatg
      601 gagtttaaag tattctgtgt gaggttaaaa cccatcaacc agaatagatg gattttatat
      661 tataacagaa ggcacaacgt actcataagt atttaatgta ttgcatggtt atctattgtt
      721 atgtatccta agtctaccaa acaaaaatat aaaaacaacc attaaaaaat gaaactaaat
      781 caggtatgta tataaatatg tggagagagc agaaatggaa ggaaactgca atttggtctt
      841 aaaataaata ttcatattaa tttttgcact tatgtccatg aacatcagta tgtagctctg
      901 ctgcaaggga ggagcatgta taatgagaac gcagcttaat ctagctttat gaacactttg
      961 acagtaagac ac
//
LOCUS       KCKM01002395             629 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37639apa ultra-conserved element locus
            uce-4396, sequence.
ACCESSION   KCKM01002395
VERSION     KCKM01002395.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 629)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 629)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..629
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37639apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>629
                     /note="ultra-conserved element locus uce-4396"
BASE COUNT          246 a          109 c           99 g          175 t
ORIGIN      
        1 catttagttt acctgtggta acacgttatt taaactcaag caagtacaat ttggactaaa
       61 accttcactt ggaaataact gcaaaacttg agggttttcc ttttcttaaa aagatttaat
      121 taaaaacaca agatgaaata aatattttag gcaaccagca acaaaatggg aaaataccat
      181 gtgtttggag ttttagtgcc ctctgagtgc tggaatttat ttgcagcaag cagaaaatag
      241 acagcaagca taaaaattca gcagattccc gctagtaaaa ttatttatca agctaacaag
      301 ggaggaaccc ttctagtagc aacaagccag caaggaaaag acgtgccttt atattttacc
      361 tttgggttag cacaccagta aaaatgccaa ctgacaagca cttcacataa acatttcttt
      421 ctaaatgagc tgccttgtta gaaaaaaatc taagcaaagg aacactacag tcaacagaca
      481 gaaaaaccca agatgaatag tacattgctc tatattacgg gaaaatataa ataaagacat
      541 aaaaatgatg ttgatgcata aatgaattta ataaattaac acttcatttt gcatttaaaa
      601 taactacttg agctatacat cattctgct
//
LOCUS       KCKM01002396             606 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37653apa ultra-conserved element locus
            uce-7200, sequence.
ACCESSION   KCKM01002396
VERSION     KCKM01002396.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 606)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 606)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37653apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>606
                     /note="ultra-conserved element locus uce-7200"
BASE COUNT          176 a          141 c          136 g          153 t
ORIGIN      
        1 aggaggcaga gcccggcgcg gcggaacaat gcgctgcggg gcgagtcggg acccggcgcc
       61 ggtcctgccc ctgcccggca gtatcccgcg gtagtgcctt ccgatgaata acatctgccc
      121 ctacttttgt agtacgttta aatactaaac agaggaggag aagacgtata aagaagtact
      181 taaaataact gcttctaata gcctttaata cagacatttt gggtaagtaa ttacagcaaa
      241 tttcacattt caccttcaac ccctgaggct acactatttc tccacctcct ctgaaatgaa
      301 ctgaaagcac ttattctttt gcactctgat agagaacagt ttaatattct gcgggttagc
      361 tatttttctt cactttctat tagagaattt actccttaag gagcatgttg atagcgcacg
      421 gtggaacaga ggtccagaaa gccctctctt caggaaaaaa aaaaatcgat accactcact
      481 ctgtgggtgg gtgtgggggt ggctgtacac acgcagatat gaacacatgc gttatcacag
      541 gaatgaacaa agcacgaaaa agcccacaat cacatgacgt gttctatgta caactatgat
      601 ttaggc
//
LOCUS       KCKM01002397            1094 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37669apa ultra-conserved element locus
            uce-7869, sequence.
ACCESSION   KCKM01002397
VERSION     KCKM01002397.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1094)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1094)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1094
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37669apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1094
                     /note="ultra-conserved element locus uce-7869"
BASE COUNT          311 a          193 c          211 g          379 t
ORIGIN      
        1 tttagcagga aaaagaccca tacattttcc ttatgagtgt cttgctcgtt ggaataaatg
       61 aaactgtttt ctgtggctgt gatgtttgta ttacttgaca ttcttcaaca tttctttatc
      121 cttatcatgc ataattatag tagaagttta ggctgatttt ttcattccat ctgttgatgg
      181 cttatttagt tctctttctc aagagcacag aaagtactaa aatgaatctg agaatgttta
      241 cagctaggtt tcttctgacc caggtcatac tgttgtcttg aatccgtttt ctctctcgtc
      301 ctcaacggaa gacaaaaaaa aatggcttaa tctcgcgggg ttaaataaaa gaaggaatgc
      361 ggtgcgagga agattccttt tatgcaagcg tgcagggatg actgaaagtg cctgtgggca
      421 tttggtcccc attggctctc gaagggaatg caatgatgcc cacagatagc ctgtattgtt
      481 gtcagttaaa tgggatcatg agtgtctgaa aggtgtttga gaatgaactg aaaatcattt
      541 tcacaagtgg atgattactt ctgccacatg ttaaccgaac tctatcagag tggcccagat
      601 ttttgagact gcattaattg ctctttcaac cttgactgag gtttctcttt aagaaaggcc
      661 tttgctggac taaactgcta cacgtattga tttttctcta tatatttttt tcattgtttg
      721 tgataaatga agccttttac aagtagagaa tttatcattc aagatgtaga tagattgcct
      781 cattccttag aataaaaagg ccagtctaaa aatgatctct gtagaagtag taagtccttt
      841 ctcatttttc cagcagtgaa tagctccagt attccacact caattatgtt tttcagctat
      901 tcattagtgc tggttttttt catcaaaaag tagaaacctg cactctcgca gcatggattt
      961 aaagcaaata agctaccatc ttctttcctg tgtgtgccat cacataattg aaactgaact
     1021 ataatattta gcaatatggt tttaggtctt tgtaatgcaa ggaaatggac tttgaaaata
     1081 ttcagccttt agat
//
LOCUS       KCKM01002398             495 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37685apa ultra-conserved element locus
            uce-4632, sequence.
ACCESSION   KCKM01002398
VERSION     KCKM01002398.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 495)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 495)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37685apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>495
                     /note="ultra-conserved element locus uce-4632"
BASE COUNT          152 a           91 c          107 g          145 t
ORIGIN      
        1 ggtgacagcc cttgcaggac acgcactttg cataatgctg gtggtgtgct acaaccactt
       61 gatggcaccc tttgatttgg tacatccctc attagccgta gtgtttgtga tggaataaca
      121 cgtaagaact aaagactgca aggtatctgg ttaatgtaga gatgaaatga atgaaacagc
      181 aaggctaagc tttcctgacc cttcatgaga gaatagatga aaaaaggaag aataagctat
      241 tgtgccgaag ggagatgatg aaattcaaga tccatacaca taatctctgg ctcagcctct
      301 gaaatgttaa tccctgggta gaattatttg agctgtagat tgcagtttat catcaaaatg
      361 gcactgtgtc aaacaatact tcttgtacgt gtgatgttta gaactatcca attttaatat
      421 aaaatggttc acagcgcact gtttaacatt taagtagcaa ctcattaagc tcaggatgct
      481 tttgctcgtc tctgt
//
LOCUS       KCKM01002399            1147 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37714apa ultra-conserved element locus
            uce-1576, sequence.
ACCESSION   KCKM01002399
VERSION     KCKM01002399.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1147)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1147)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1147
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37714apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1147
                     /note="ultra-conserved element locus uce-1576"
BASE COUNT          370 a          216 c          218 g          343 t
ORIGIN      
        1 aagctttgaa actgctcaaa tattatcaga cttatcacat gaagatttga aggatttgtt
       61 ccaggcacag tacaattttt gccatttagt gattaccttt aaattctgca aagccgtttc
      121 tcacgtgtcc ttgtgcagcg ctttgggaga ttgtctgatg tgaaaggcac tattacacat
      181 tgaactgatt actgttgttt gttgctgtta acacagacaa gaaaccctcc tggcagggaa
      241 acaacttctt tgctaataag tattcataat ttgtatctca gcaaaagatg taaacatata
      301 ttatcattaa ataggctgta attttaattg cctataaatg ttattaattc tgattgtgat
      361 tattcaataa gtaataaaga taaaggctgt caaaattaat taagtacata ttcattaaat
      421 tcaaggtagc ttcagtttct ttattgcaca aatacaatta acacttaatc tgaatctcag
      481 taagttacat aatcatgtga ctcaaaataa agggaggata caaccttggc cttttacttt
      541 ttacatggga aaacattaat gatgctgaca ttggagacaa ttagacagtg tcggccaatt
      601 gtttttagtc agctttctct cacatctgtg gtgtctacaa gcaagaaggg ccattgtttc
      661 tgcaggcctc cgtcgcgctt tggctctttg tgcgaaccgt caatctcttg ctgaatatca
      721 aagctgtgag gaaattagaa cagaccagct ctactgcacc acactaaagc ttagcagggt
      781 gcatccacta tgctactaat taggcagtgg ccaacaaaat aacctgtcaa tgtgtgcttg
      841 ccatttccca cacacctgca tttcatacac taataagcgt acagccaggg agagaaaggg
      901 ataactgctg aagtgtgaaa aatgaacaaa atataacaat gtttctctcc ccacctatac
      961 tactgccaat taccatttaa cattaggtag aatcaacatg tcggaagaaa tacaatacag
     1021 tatctgaaac taaagagggg gtaggaaggg gcaaagccac acatagcgag tgtattaatg
     1081 tttgtggcag aacgtcgcgc caagtggaat ctctccttat ttgtataagc caggaggttg
     1141 aaaatga
//
LOCUS       KCKM01002400            1045 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37729apa ultra-conserved element locus
            uce-3978, sequence.
ACCESSION   KCKM01002400
VERSION     KCKM01002400.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1045)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1045)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1045
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37729apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1045
                     /note="ultra-conserved element locus uce-3978"
BASE COUNT          310 a          180 c          207 g          348 t
ORIGIN      
        1 ttccttttat ttctttgaca gttgtattgc tacgtagctg aagggaagtt cctttgtgtt
       61 gcctgctggt ttaaagtgaa tagaagcact taagtttgtg gtgcctagga tgaaagatct
      121 ctttgagagg accatagctc ttaaaaaatc ctttatacga taagataatg ctaataggca
      181 gagcatctga agatttagca tttaatactt gctatgttcc acttctgaaa tgtgtccttg
      241 aaatattctt ttccccttga tttttagcgt acataaaagg tgggtggata ctgcgaaaag
      301 cctggaaaat ttacaataag tgctatacgg acattaatac acttcaggaa atttatcaga
      361 agaaaacaac tcaggaatcc ttaacttctg atgctgcaaa tgataatcat attgctgcag
      421 aaggtgtaac ggaggattcg ctaaacagac tgaaaggtgc tgttagcttt ggatatggac
      481 tttttcatct ttgcatatcc atggtgcccc caaacctgct caaaatcatc aacctgctgg
      541 gttttcctgg agaccgccta caggggcttt cttcactgat gtatgcaagt gaaagtaagg
      601 acatgaaggc ccctttagct acgtgagtag ctatattgaa atgctttggt agataactta
      661 gtactaaaag taagtaactg aaaaaaagtc aaaaccagtc gtgttgcttt aaaagaaaca
      721 acagcaggta aaagttgctt gcaagttgtt gtttaacatg ccacagttta gtaaattcat
      781 cactacttag tgtatgagat ctctctactg tgagttattt acatgtattt ggggtttgtg
      841 tcagaatatt ctttagtacc tgctattcta atgtctggtc atttataagc cagcagagta
      901 aatagaagta ctcccaaggc tgagtaaatt tacctgagtt attctccact atggtgaaca
      961 tactgttttg tacgagttgt tgatctcact tagctattta tccttactat tggccaaaga
     1021 tttttccaat ttattttcaa tttta
//
LOCUS       KCKM01002401            1034 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37743apa ultra-conserved element locus
            uce-2940, sequence.
ACCESSION   KCKM01002401
VERSION     KCKM01002401.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1034)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1034)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1034
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37743apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1034
                     /note="ultra-conserved element locus uce-2940"
BASE COUNT          320 a          198 c          222 g          294 t
ORIGIN      
        1 ataaatcatt tcttctgtgt tctccttcct gggtattgcc tatggaaaat gtttacattc
       61 tgtttaagaa agaagacatc tttagagctt ttagagtgca ttacaaaaac aggaaagaga
      121 acatttagca ttactgatat gcatttttaa aattatgata aatacttaca acagttttga
      181 aaaacacttt aaatgtacag gcgtgctagt gatagctctc tatattgttc tgttaaattt
      241 atacaaagtc tgtctgtgat agatatgtat gctagtttta aatcctttcc cttctctttt
      301 taagagagtc agttttggaa cagctgtaaa ttagtgatga gctattagtg agctgtgtca
      361 ttatttaata aaaatggctt ctctcacctt attttttatc caggtccctg acaggctgga
      421 tgaaatgaga tccccatgta gcaattgcca tggaaacctg tgactcccct actatctcaa
      481 ggcaggaaaa tgggcagagc acatcaaagc tatgtggaac gacacaactt gataatgagg
      541 tgccagagaa agttgcaggg atggagcctg acagggaaaa cagctctaca gatgacaacc
      601 tgagaacgga tgagcgcaaa agtgaaatct tgctgggttt cagtgtagag aatgcagctg
      661 ccactcaggt tacctcagca aaggagatac cctgcaacga atgtgccact tcttttccca
      721 gtttacagaa atacatggaa caccactgtc ctaacgcccg ccttcctgtc ttgaaggatg
      781 acaatgagag cgaaataagt gagttagagg acagtgatgt ggagaattta acaggggaaa
      841 tagtttacca gcctgatggg tcagcatata taattgagga ctccaaagaa agtgggcaga
      901 atgcacagac tggagcaaat agtaaactct tttctacagc gatgtttctg gactctctca
      961 catcagctgg agagaagaac gagcagtctg cttctgcgcc tatgtcgttc tacccacaga
     1021 tcatcaacac tttt
//
LOCUS       KCKM01002402             610 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37759apa ultra-conserved element locus
            uce-2815, sequence.
ACCESSION   KCKM01002402
VERSION     KCKM01002402.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 610)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 610)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..610
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37759apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>610
                     /note="ultra-conserved element locus uce-2815"
BASE COUNT          230 a          103 c           96 g          181 t
ORIGIN      
        1 agactagttt aatctcatcc ctataaacaa atcagcttaa gcctaatgaa atcttatttt
       61 tgtaaattaa tgcacaaagg aaacagttca gtgtaaacag acttgtagta tgcattgttt
      121 agagactatt gactttcgaa ttagcctgct tttcaaacat ttcacgtcaa aaatatagtc
      181 aaaatgcaaa tgtagcataa acgactctat aataaatgct cattcaacat ttattcttcc
      241 tcaaatcatc ttttaaagct ctttcatgct aatgtctaga agatgtgaca ttagaaaaat
      301 tgctttgaca tgctaagggg ctccaagatt aacaaaaaga gaaagaacaa gataaagctt
      361 tcaaaagacc tatttcagag gaattattac ttcctttgaa agtcttccaa ggttgtagtg
      421 catttaagct tgttggcata catgtaaatg aaggactaca aaagtattta actaaacaca
      481 acttgaatta aacctgcagg caaatgttaa ggaatgagga taaaggctag accctagact
      541 ggcaacaact catttaaaag cagttcttta tctaaggaca tcagcatggg agaactatta
      601 atcaatacaa
//
LOCUS       KCKM01002403             560 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37775apa ultra-conserved element locus
            uce-6943, sequence.
ACCESSION   KCKM01002403
VERSION     KCKM01002403.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 560)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 560)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..560
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37775apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>560
                     /note="ultra-conserved element locus uce-6943"
BASE COUNT          185 a          113 c          107 g          155 t
ORIGIN      
        1 tatgatgtta aaatgaaaac tcattgttgc atcccagagg gattcaggaa cactgacttt
       61 gctgcccatc tgaaatggga taatgttctc tattcctatc atgtgggtat cagttccaac
      121 ttggaaacca gcctcctctc ataattcaag ctggggctac actgatgcaa accttctcag
      181 atattataag ccagtatgag ctcaaaaaaa gaattcactg ctcaaggcca aatagcttca
      241 aagctaacaa tcctccagag tcagtgtgaa agtgttgaaa ctgtcaatgt caacttacac
      301 catgcatagt gagtgtaaaa cttcaataat gacatcatgg agaaaaggac aaagggcagg
      361 cactacacag aaaagtgcca gtgctcttca aatctttgaa accttcaagg atttatctgg
      421 actaacactt ctacacatag tcattggggt cttaggctat actgattaag gatttagctt
      481 attcaaaggc tctcactgat agcaaggatg acaaggtttc agaagttata ttggattcca
      541 ttagctttca cttaaaaaga
//
LOCUS       KCKM01002404             278 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37791apa ultra-conserved element locus
            uce-7691, sequence.
ACCESSION   KCKM01002404
VERSION     KCKM01002404.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 278)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 278)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..278
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37791apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>278
                     /note="ultra-conserved element locus uce-7691"
BASE COUNT           82 a           61 c           44 g           91 t
ORIGIN      
        1 cacacatgct catgcttatt ctatgctttt tcgcctcatc tggcagccgc tttccggtcc
       61 agcagacact aacatctaat gagtcaaact tcccattttc agactaatca gtcggctgca
      121 ctaattgcaa atgcaaatat gcaaatttat attaattaat tactctgcta attagttctg
      181 cggtcttttt ggggtaataa atcattgtgc agtggaaggg aaacatgtcc tgtcccattt
      241 cactccacat aaaaatttaa tgtacttatt gaagaaaa
//
LOCUS       KCKM01002405            1022 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37806apa ultra-conserved element locus
            uce-7372, sequence.
ACCESSION   KCKM01002405
VERSION     KCKM01002405.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1022)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1022)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1022
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37806apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1022
                     /note="ultra-conserved element locus uce-7372"
BASE COUNT          294 a          255 c          209 g          264 t
ORIGIN      
        1 aaaaaaaaaa caaccaacca tgaaacaaaa taaaaccaac aacaaactgc aaggaagtta
       61 agggaaataa acccctaaat cgaatttctt gctttaaaag tgctttacat atatcaccac
      121 caaccagcat gtaaatttta gtcagctact ggactagtct tttaaagaag ttgaaaaatg
      181 gccctgcatc ctcaaaggac acacctgtta tctgaaacag tttttaacca gcttgttaag
      241 cagctttgac agatcaaaga ccccagacaa tgggcacaaa ctttaacaat agtttagcct
      301 tgagcaaaag cttctgtcaa agcaaggctt gtgccagtag tattatggcc tgcaattgaa
      361 aataaatttt acttgaataa gtacctcagc ccgatcagag gcactgccgc cagggagaca
      421 aaagcagttg gggataagtt attgactcca ctgacagcat gaatgaagtt cattatgcca
      481 gcccactctt ggtaaatgtg tcaggtttta aactgaatta ggtggcaggt gcatggacca
      541 ttttcctgcc ccccttgaga cagtagaagg ccagccatca cctgattcta cagacaaatg
      601 tttagatttg gttttcatat cgcatgggca caagtgacag tgtatttaaa tcataaatga
      661 ggcttcctgt gagccctcgt ctgtccctct ctctccatcc cctgtcgctg gctggccatg
      721 ctcctgctgc attgcccacc cctcgctgga ggtgggttct tctcagcccc caccaccgcc
      781 ccctttctgg tccctcttcc tgtctgccat gggagtgtgc aggatttggg cttccacggg
      841 ccacctctgg ggtccggtgc tgagtcagaa gggatcttag agccctctgc ctctattcag
      901 gtgacaccat gcacagccac gttttccact ttacagggtc tgaatcaaga cctcccataa
      961 atggtattgt gtgatataca tgtatataca tacggacata aagagattga atccagaacc
     1021 ac
//
LOCUS       KCKM01002406             778 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37822apa ultra-conserved element locus
            uce-4303, sequence.
ACCESSION   KCKM01002406
VERSION     KCKM01002406.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 778)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 778)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..778
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37822apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>778
                     /note="ultra-conserved element locus uce-4303"
BASE COUNT          270 a          111 c          190 g          207 t
ORIGIN      
        1 caatggattt caaattaacg aggcaacggt gacttttttc actgtcccaa ttttaatgcc
       61 tgagaaaagg aggagggtgg ggaaggttgt ctcacagaaa gaaaattaat ttgttttatt
      121 gggcactgaa aacctaagtc ttttgtcaaa cagagaagaa aacatatatt tggagggaga
      181 gctgggtcac cagttaaatg tcaaggtctg ctaaaatcaa aaggtaagag gggtgggtga
      241 caatgaaatc taagtagaaa accataaatg taaagaaaca ccagtatttc tgggctgggg
      301 tggaatgaga aaaatggcca aagacaaaga taggcagcct gggtctggaa gtaattacag
      361 ccaagtgaag acaactgaat tccatattac tttggtggat gtctgtaaag gcagtttggg
      421 gaggtatttt ggtaaggttt actttttgga gcttagcaac ataaatttgt tgtcactgaa
      481 ctattaaata aaatagacac atgttggcaa agagtgcaca gccgagggat ggaactgatt
      541 aagggacagc ctatgaaata atggcttaaa tgggcccact gcaggatttt aatatcccat
      601 gacaacactc aattgtcaaa ttctgctgga gtgtccagga tgctactaaa attaagccag
      661 aaattcctag atttattcta ttttttttac agctaagaac aggaaatgcc agtaagctgt
      721 gagaatctga gcaagaaact gggaagaaaa gaggatggtc taaaatttta tgagattt
//
LOCUS       KCKM01002407             968 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37836apa ultra-conserved element locus
            uce-7924, sequence.
ACCESSION   KCKM01002407
VERSION     KCKM01002407.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 968)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 968)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..968
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37836apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>968
                     /note="ultra-conserved element locus uce-7924"
BASE COUNT          229 a          204 c          185 g          350 t
ORIGIN      
        1 gaaacctgga gattgggaaa cttggaagga agactcagag tcttggactc atcttcatct
       61 gtgtcctcca gctgaaggaa gtactggcct gcttgtcata ctctgcaaca cttgagggta
      121 gtgaggtttg gaagaggagc aggaatgtag gtgggtggaa gaagggagag taatgattgg
      181 gtttgtgctg aagtggcaaa ctgtactgtg tgtgtacatc tcccagggta aggttcttgt
      241 ttgaggaaac caccttgatg ggcatttgaa gagtaagtat tgtactgttt taactttgct
      301 ttggtcctgg ataaatgtct atgagggtct aagttaataa ctaatacaag ggtgggaaag
      361 actaggcagc acccttcctc tttacaatct agatggcatg attccccata gacccctggt
      421 catattgtcc tctttctcac tttgtgtgtc tcaggtgccc cacgcctttt tttgaaagac
      481 taacactaga ccattcatgc aatgtgtcat ttttactaac caactaatgt actaacaccc
      541 taacgactca tctttgcttt tagttatttt aattaacaat cgttctgttc acgatttttt
      601 aatttccttt cttccccctt ttccgcaaag cactcaggca ttggacacgc tatggtaaac
      661 aaactacatt gtctggtaga tatcattctt attgtctctt tttttgggtt tgccgtgtgt
      721 tacctgcctt ttcctacccc taccccctct tttacccccc tcctttatac ttaattcttc
      781 ctttaatttt attttaattt cattgaagac acttttttcc ctcctttttg tttttctttt
      841 ttttttttaa tggaaaaatg agcaacaaaa gcaactaaca caactcttct ggaaatgggg
      901 tttggacgtt tctttcattg gtttcttcac ctctctcttt tgttcttctt ttccattcca
      961 gtgataaa
//
LOCUS       KCKM01002408             705 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37850apa ultra-conserved element locus
            uce-4932, sequence.
ACCESSION   KCKM01002408
VERSION     KCKM01002408.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 705)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 705)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37850apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>705
                     /note="ultra-conserved element locus uce-4932"
BASE COUNT          229 a          133 c          123 g          220 t
ORIGIN      
        1 gtctttctga aatctcacaa aattctctgg actttcaaga aatctgagtc tgggttctcc
       61 attttacact ttcattctgc tgtcagaact tggggttttg tttctgttac attggcagga
      121 aagaattttt aatacagtac tgtgtattta ctttatctgc ttgtctttac aaatcactct
      181 ccaatccaag ggtttggtgt gagacacaga gcgagcaaga agtagtactt atagtaaaac
      241 atggatagtc aatagcatgt gggaaaacaa ctgaaactga aaatggtccc aaaggtaatt
      301 tgcaaatctg ctgaaatccc gaacaagctt tgatttaacc gaagcttgaa atggctttta
      361 tttactgtct attgtggaat aaatgacatc tcataaacag gctttatcca ttaccgcaga
      421 atggcgatca ctgtgttagg gacattttat cctcttgata taaaacaaga tatgctatag
      481 tgtgttatta caaatagaaa aatcaatgct gagacacaca cctctgaaat ttcatttttg
      541 cggaacccca ttttcaaaaa atgtattctc taataaaaac gtctccataa ccggggggat
      601 ttacaaaaca ctgagcaaca aagaacaata acaaacaatg aataaagtgg ctccatcctg
      661 agtctttttg ctgtccatta gtcacacact tgcatacatt tctga
//
LOCUS       KCKM01002409            1137 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37865apa ultra-conserved element locus
            uce-3337, sequence.
ACCESSION   KCKM01002409
VERSION     KCKM01002409.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1137)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1137)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1137
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37865apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1137
                     /note="ultra-conserved element locus uce-3337"
BASE COUNT          312 a          207 c          253 g          365 t
ORIGIN      
        1 accttaagtg ctaaatagct gcaattatca cagctgaata gtagaagcac aaatcctgaa
       61 gaaaatgctc tttccaaggt gtcctgggac atgcagtctg taaagcatga atattgctga
      121 agctgcctgt tcagtggaga acctgctttg caatgtttta tatgcacaga cagaagtaac
      181 ttctgagtta aaaataaaca aaaaatatct gcatgtttgc cttgcatttt aaacaaattg
      241 tggtgtaaag aaataccttg tgtgtatcaa attccatgtt gtattattgt tcttttttgt
      301 tgttgttatg cgagtcgtgt tttaagtgtt gtttggaacc gtaataaacc tcgatccatc
      361 tattaaagga agatttcaaa aaccaaacaa caacaacaac aaaaaacaaa gcaccaccac
      421 cccctacgaa acctaaagca ttgatgtcaa aggaaattaa tttcctggct ggcttgtgtt
      481 tttctctgag gcagatattg atgagtgtgc agaggggatc attgagtgtc acaaccattc
      541 acgctgtgtt aacctcccag ggtggtacca ctgtgagtgc agaagcggtt tccatgacaa
      601 tggaagctat tctctgtccg gggagtcctg tgttggtaag caatgctcag cagagtggtt
      661 tttggtttgt tcctgttgct ttctttttat ttctccttct gcatggtctt acaaaatgac
      721 tattgagaca ctgtcctgag cagttcctgt gtttgaggtt aaaatgagag tccaagtgag
      781 cgtgtctctg tttgttagca tccccagcca cgcagcgtgg ctgtgggttc aagagcatcg
      841 cagttttaac agttattaca ggaggaaggc agtcagagat ccgaagtgtg acttactgtg
      901 ctttgccatt tatcatcata agttgctgta aaacctgaag tgaaagtcgg ctttctgggg
      961 agcatcatag gccacagaag gggaagaatt gattttccat tttcgaattt cagcagagca
     1021 atatcagaat gcatttgggg tatgtctgag ttgctttgct tagtttgttt tccgttgttt
     1081 ggcatcttca tcattttatt tttagaatta tgcaaatagc attgagcttt ttatgca
//
LOCUS       KCKM01002410             976 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37881apa ultra-conserved element locus
            uce-3393, sequence.
ACCESSION   KCKM01002410
VERSION     KCKM01002410.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 976)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 976)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..976
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37881apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>976
                     /note="ultra-conserved element locus uce-3393"
BASE COUNT          273 a          203 c          176 g          324 t
ORIGIN      
        1 ctgtttctcc tggagctatg tagctgaata caatcactct gacaaatgtg tgccttctgt
       61 gtgtatgttt atgaaaaacc gttctataaa ttcaacacca aatgccttca ttccaatcta
      121 ctctgcagcc cccctcacac ttcccgagca gcctaaaagg agctgtagca tagattaaaa
      181 cccagtcttt taccctagtt cctttcattc tttggagtgg agcctttcct tctagatcat
      241 gtgctgtaag cactccaggt gactcatgaa aactatgtcc tgcattcaca tgtaataagt
      301 gaataactac agataaaaat ttaagtaatg taaaacttca gtttgtaaca tttccagttc
      361 attcacaaac acaaacatta actccagttg aggagagggg gagaattggg gctgtgtcat
      421 tccttttttt gttcttgtgg attagagttt ctcttaaatg aaaacagccc ctttgggttg
      481 cttgcctggt tagccatggc aggaagacaa acgattttta cagtatcaga catgcggttt
      541 cctgtctgtg tttaacttcg agcagaacat cacagccagc tggtccacgg ctcctccaga
      601 caactagata atagcctgta ataattttgc ctttggaatg tctatcatcc agatctattc
      661 tgtacattgt tcttgctttt tgtttcccta ggtttcttgt acaccaaagt aagaattttt
      721 gcacatccta cagttttaga gactggacaa aagccagtgt actgatcaaa aagtgaatgt
      781 acacatttat tagcagaaac tgggttgatt aaaaagattg tattttttct tctgataact
      841 ttcctttcaa gctactgcta aatgatcagt gctctatctc ttcttcctcc tgggtacaca
      901 cttaagacaa cttaattttt tcctggtgtt tttggggtaa gaaagaaaat tgtggtaaag
      961 caataagctc taattt
//
LOCUS       KCKM01002411             949 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37897apa ultra-conserved element locus
            uce-7222, sequence.
ACCESSION   KCKM01002411
VERSION     KCKM01002411.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 949)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 949)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..949
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37897apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>949
                     /note="ultra-conserved element locus uce-7222"
BASE COUNT          257 a          200 c          199 g          293 t
ORIGIN      
        1 ataataaacc attttttaag gctagtctca ggaggaagtg cctttgtttt tagtactaaa
       61 accagtgaaa tgaataaagc aaagtcaagt cttcaccagc tgggtcttgc aggtattttg
      121 tctactttct ccattgttct gccacgtgat gagaggtatt acatcgagct ggtgattttt
      181 tttccatcct tgagctcccc tgctccctgc cagggctact aatattatgt attctttact
      241 gtgttctaag aagattacta aaccagctga ccaaaaccgc agtggcacca attaggcatc
      301 attcaaaatt aataaccact atgatgataa caaatcagaa gattgattct tctgatggga
      361 gaataatttt aattaattta atccttgttg aaagatcagc tgtgcacagt cctgctcacc
      421 agtggggccc atttgtccct gtctgtcccc gtcacctaaa gccagtgaat atgatcagta
      481 gccagcactt agggaacaat aagaaacaga ttgtactgtc aggcttcatt aaagatcatc
      541 attagtattc caatttggaa acagtcaatc tatcctaacc ttttaccaat tcttttcggc
      601 cgcttttgtc aagtttggtt cagctgctaa atgtaaaaac gctgcgcagg cttctttaaa
      661 acagcaagct ggatctcgct gatgcctgtc aggccgcagc ttagcgacaa agctcggggg
      721 aaattcgtgt tatgcgacca ggctctaaat gataccatgt gcagctgctt atgatctgag
      781 tatttgcggg caatgaaatt ttcttaaact cgaagcttag caatgatgaa ttgagatgaa
      841 attgatatgg cactttcttt catcttgctg ttgagattat ggtcccaagg gtgtgtttgc
      901 agagctggtt cactggctgg gctcccccct ctgcagaggg cattttgag
//
LOCUS       KCKM01002412            1090 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37911apa ultra-conserved element locus
            uce-2419, sequence.
ACCESSION   KCKM01002412
VERSION     KCKM01002412.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1090)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1090)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1090
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37911apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1090
                     /note="ultra-conserved element locus uce-2419"
BASE COUNT          324 a          231 c          199 g          336 t
ORIGIN      
        1 gttgttttat tactgttatt tatcttgatc gcgtttgttc tgcttagaag aaataaaaca
       61 caggcgctct ttgctttaat tgctgggcct attctttagt aaacaatgaa aagtgattag
      121 agatgttttt tggcatgcac agtccaaaac cacctagtga gagttcaaag aacaaagcaa
      181 atgcttattg gaagaaatta ctctgctaac taaacttgtg tatctttgag tcagacattt
      241 ttcagcatct ttaccccatt tatcaacgca caattactgt cactattgtg ttgtgtcatt
      301 aggcgtaagg ttacaagtgc cagtcagaat aaaaaaattg cagtaatgct ggcataattt
      361 ttcattatca tcttcattaa ccacagctag tgggagtaag agtttatcct tgctgttgtc
      421 atcgtcatga caacgcttgc aaagcttgtc tgccgagagt tcaccagcta caaaaaactg
      481 aatgtcctca ttattccgct tctcacactc tcacccatgc caagggtgat ccgagatgca
      541 cagggccctt gatttatccc ctgtgatttc tcttgacagc ctggtatggt gtctcagctt
      601 aaggcaatcg gtctgatttc acagtttaat tactgctaat ctgaaggagc gtggccaatg
      661 ctaatgagcc cacagcaatc aaagaataat ggttaaactc tccctgtttc attcttctct
      721 ttttattaaa acacctctgc cctgaaataa gcaagtaatt tctccttctc tgcacaactg
      781 cattgagaga acagacaagc ctcatgcaca ttttggtgtt atttgagaag cagaccgtaa
      841 gattctttta tattttgcac ttaaccccct gcttaatgtt agtttccaaa cagctttgat
      901 tcaagaaaag aatcaataac tggaaaagag tcattagtgg atcactagct caattgcaga
      961 acatccatgg tggcacacca gagccaaatt tgggatggcc ccccttgatt tttgcaactg
     1021 ggcaccacta aattatgcaa caaatgaaaa tatctgtaac agcactggaa aagagaacct
     1081 agaatattca
//
LOCUS       KCKM01002413             514 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37927apa ultra-conserved element locus
            uce-3733, sequence.
ACCESSION   KCKM01002413
VERSION     KCKM01002413.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 514)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 514)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37927apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>514
                     /note="ultra-conserved element locus uce-3733"
BASE COUNT          160 a          102 c           88 g          164 t
ORIGIN      
        1 tttctgaaac agtcctctcc ctccacccat gtccccaaca tacacactac actgtctggc
       61 tgttgcactt ttttttttcc cagtgtcccc ctttatctgc ctcaaccaat ctccaaatga
      121 atgcatgtct atcatggcct tagctttgac actctggata tattgattaa tagttgccct
      181 aagctccttt tagcaaatca aattttcact tttagcaagg atttcgcctc tgatttattc
      241 agcaaagtga aatgcactaa attgactttg acattcaggg aaaatggctg aaaaacaaag
      301 aggggaggaa agagatataa attgtgtggc agctggagac ttcaagcata aaagaggcag
      361 ttttctatag aatatcactg gttaatttgg aaacacgcat ttaaacagga gtggaaatta
      421 ttttcttaaa attagatgtt ttttagactg aggatttggg atataataag gtttacttag
      481 caaaatgcaa tatattcaac ccaaattcat cact
//
LOCUS       KCKM01002414             841 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37942apa ultra-conserved element locus
            uce-4593, sequence.
ACCESSION   KCKM01002414
VERSION     KCKM01002414.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 841)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 841)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..841
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37942apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>841
                     /note="ultra-conserved element locus uce-4593"
BASE COUNT          255 a          177 c          149 g          260 t
ORIGIN      
        1 gtttaaactc agcgaggggg aagaagaaga tattgtttta caatgattca gatcacgttc
       61 cacgtgagga ctttaatgca ctctttcagg tatctcgtgt tgtgatgctg cctctgctga
      121 gtcctcggtg caaaatccca aatatttttt taacgtttgg gatatgaaca ggcattagtc
      181 ttctgccatg tatacactta ttagtaagat tttttttgca ccgtataatt gaagcccagc
      241 agtttttacc aaccacggct caagaggaaa acggacacaa tgtaatgttt tgtgtctctt
      301 tttgtccgtg caaactggtc actgaaaagg tgcaaagcgc tgctaaaagt acattttcta
      361 aaattcaaag ccttttaaga aaggtacaca atgcaagaat acgcagctgc aattttaaaa
      421 aggctactgt tcctttaatg cccagctggt cctgagatgt aataaaattg acatattgat
      481 tcctttgaat ttacaaatgc ctgtttcata aactccatct ccaaagccta ggcatcttta
      541 gagcactgtc atttttttct ccaaatggat caattatgtg cccacgtaat cctgttacct
      601 gtgaaatcca tgcatacttc tcccatttgc tgcagttccc aggcggacaa acttgcatta
      661 tgtacgcata aacaaacaga gcattttcct gatattaggg attgttttca aagtgaaagg
      721 caatctcctg ggtcctttac tccaaaaaac atacatagtg cagtgttcct ccaagtaacc
      781 tcactgcact atatgtataa ttattacaca acacagcaaa tcattaaaaa aacattgagc
      841 c
//
LOCUS       KCKM01002415            1006 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37957apa ultra-conserved element locus
            uce-7383, sequence.
ACCESSION   KCKM01002415
VERSION     KCKM01002415.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1006)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1006)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1006
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37957apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1006
                     /note="ultra-conserved element locus uce-7383"
BASE COUNT          330 a          151 c          179 g          346 t
ORIGIN      
        1 aataagttat gtatgttgtc caacagcaca tgaatacttt ttctatgaac aaaattttta
       61 caatattaga tgaagcctaa tgagaacatt tcaactataa tttatgggct gaaaaaagag
      121 gatgttctct aatttgtctg tacagcgatg catgattatg aagctggggg ggaggggagt
      181 gttccagcac atacctgata gagagatgag aatgtggtat attcttcgta cacttttaat
      241 gggagttttg taagaaaaag tttaatacac agctcttgtc tgaacaaacc tctcactgta
      301 aaatgtttac ctttaatgac atgtactatt atttcatgat tattttaaaa tacacttaaa
      361 gagttttaca tgttaaccag ctactaagaa tgccttaata gagaactaat ttttgttaga
      421 ggtgtctcga caatttgaat tttatatgca tgcattatgt tttcttaaaa tggggaaatt
      481 atgcatctga aggaatctgt ctagaataat ggggttctat agaggttact ttaatcacgt
      541 tcaccagcag ttatagctgt tttacatctt atttgcaaca aaagggaact ctaattatct
      601 tcaaaaagag cataaaatgg tgtgctttgc tgctgatgta atgttgattc gtgaatgctg
      661 ctgataggaa ctgacaacta aatacatgtc acacttttaa gaaatcagtg gtggtgacag
      721 gataaccctc atttgtgacc tggggaccag gagatggggt atatatttgc ttgctaagta
      781 gaaacaattt acagttttca ctttaaaata aaaataaaaa tgctgctata gatgggttat
      841 cgattatttt taacaatgca ccacttccgt tatgaattac aagctgcctt ctgtaaacta
      901 gatctagtgc ttacaatcac ccgtaaaaca gtaacacctt tttgcatttt tcataaatta
      961 ctgactcttt attttatctc actatatatt tatataacat atatat
//
LOCUS       KCKM01002416             488 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37972apa ultra-conserved element locus
            uce-3583, sequence.
ACCESSION   KCKM01002416
VERSION     KCKM01002416.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 488)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 488)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..488
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37972apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>488
                     /note="ultra-conserved element locus uce-3583"
BASE COUNT          182 a           69 c           82 g          155 t
ORIGIN      
        1 attatggtaa gattttattg aatgcacatt atacatatag atcataatac ttattaaaaa
       61 agactattaa gattttacag ttcaagattt tacaggcaat gggaacagtg gaagcctaat
      121 gctttctgag aatcatatct gcattagcaa gataaaggac aatttaggaa gattacaaaa
      181 gcaatgattt agagtacaac ataaaaatct gctgagaact aattcgcaat gccagctgct
      241 gctaagcttc ttaatcttta tctagttcaa ttaaaatctg aatgtttggg atttcattaa
      301 caactaggga cttggaaatt acatgcactt ttacactgta ttcaactgct tatgcacatt
      361 ataggaagtt gcctgaaacg tcttcaggta gacttgagat ataattaaaa cttaagtact
      421 taacggataa tgcagaggta aaagaggatt attttaattt ttctgtcaga tccaattgac
      481 aaaaaaaa
//
LOCUS       KCKM01002417             361 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 37987apa ultra-conserved element locus
            uce-1922, sequence.
ACCESSION   KCKM01002417
VERSION     KCKM01002417.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 361)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 361)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37987apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>361
                     /note="ultra-conserved element locus uce-1922"
BASE COUNT          112 a           65 c           81 g          103 t
ORIGIN      
        1 aaaaaaaaaa agggttgcat gctgtaaaca ttataaacat attcaaataa gcttaacaca
       61 atctgccatg cttatttctg cctagatcat ggaccagcga aatggttaat gcaaatggat
      121 ttataatttg ctttgggggg ccagtttctt ctccttattt attagcccag ctgatggggc
      181 agatttgatg aggcacttct ggaataattg agtcatcaca caaagaaggc tgctagcatt
      241 cagagtggtt ttatcagcag caagcaggcc tgattactga caattacact ctgatccggt
      301 gatggaggag aaagagccaa cgagtgggaa atgtccgtgt ttctatccag gaataatttc
      361 t
//
LOCUS       KCKM01002418             755 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38001apa ultra-conserved element locus
            uce-2613, sequence.
ACCESSION   KCKM01002418
VERSION     KCKM01002418.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 755)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 755)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..755
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38001apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>755
                     /note="ultra-conserved element locus uce-2613"
BASE COUNT          212 a          153 c          175 g          215 t
ORIGIN      
        1 gcattaagac agctccatca agagggcagg cgctccgtct ctgggccctc ccaacttttg
       61 tgcttatctg tgccccacag gcatattata atactgtatg acatgtttac aagttctaac
      121 atcttacttt gtgcaaccgc atagcttcct tgcagggctg gggaactcgg agcgttgtat
      181 gtctggcaga gatgagggaa tttgataacc ttctctcttt gggtcttagg gcgagttgaa
      241 tgcgtctggc ctgccaaggc acaatttaat gggcttctga aaacactcaa aaggcagaca
      301 taaatgtgtg gatgggcagg cagccagggt gacctggggg atgggcccag gctgatttta
      361 agcagggtaa ggtcgtgaag gaatgtttga ggacaaagcg ggctggggga gtatgctgaa
      421 agcctaatgt ttgactggag tggatttaca gagcttgaac ctgactctgt aacttaagag
      481 caaaagcatt cccacctgtc cagctttaaa agggaagtgg aaaatgtaaa gaatatataa
      541 ctaatttcaa ttacaagctt cacatatctc ctgcttggat atacactatc tttatttcct
      601 gcaaggagtt taagatcaag tgcagcaacc gtatttaaaa taaaatagaa accagctcac
      661 tcctataaat ctgcttattc ccccctcaaa gtttttgaac acctttaata tttgagattt
      721 tgactttttg gtactcttta caacaagaat tttac
//
LOCUS       KCKM01002419             938 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38015apa ultra-conserved element locus
            uce-7369, sequence.
ACCESSION   KCKM01002419
VERSION     KCKM01002419.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 938)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 938)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..938
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38015apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>938
                     /note="ultra-conserved element locus uce-7369"
BASE COUNT          264 a          169 c          194 g          311 t
ORIGIN      
        1 ctggccgtga aaacaaagaa atttgagttc atactgttgt ggtaaactga aagaaaagtt
       61 cctttttaat acatatttgg aggacctgac tgttgcaaaa gactgacaga aatacgttaa
      121 gatctagata cccaagatgt ttctcttaac ttcactggga gggttttatt ttttttggag
      181 catcagcact accctccagt ataaacccag taacgcttcc tgaacgttca cattctcagg
      241 gcattttgag ctgcaccttt agtaacaaat aaacaagaaa tgaacttgtt tggcgtttca
      301 ggccaatgac caaagccagg gagcccggtg agtatgctgc tttattctct ttaactttat
      361 ttttgtgggc atcatgcatt ttttgaatgg ttatacattt ccctggatca atgtaatata
      421 aaagatttac tgttacagtt tgtgtgtggc caggcaatgg catatggaaa acatgtttcc
      481 tgctatttaa tttaattact ctaattcacg tgccagcccc gggcatgtca ttctggacct
      541 ctgaggctct ttgtctgtca aagagatgga caatatcttg gctttgttta gttgctctgc
      601 aggctgcaga taaaaccact gaaatactga ctgtttgttt aaccaaaact ttgcatttta
      661 accatttggc tttgaaaaag atgacatttt ggccttagtg agttgaaaag gaaatattag
      721 ggatatgaag aagaactgtc acttttgggg cttaatagat gaaaaagaat actctagcct
      781 tctggtcaga aaccagcttt gttagcagaa actttagacg tgcatcgctg ttattttaga
      841 gttgcctgtt agtgagggca gctggaaaaa tcctgtttat aactgctcct ttctaatatg
      901 ggtagccctt cattcagctg tttcagtaga tttttgtt
//
LOCUS       KCKM01002420             942 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38030apa ultra-conserved element locus
            uce-6586, sequence.
ACCESSION   KCKM01002420
VERSION     KCKM01002420.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 942)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 942)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..942
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38030apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>942
                     /note="ultra-conserved element locus uce-6586"
BASE COUNT          233 a          248 c          224 g          237 t
ORIGIN      
        1 acaccccttg ctccgctggc agagatggcc tttgctatcc cccagggaca gggacagccc
       61 ttcttcctgg tgtgacaatc ctggcctcag ggcagggata tctcaaggtc tacccatctg
      121 aggcatcacc cagtgaggca ggaggagcgc tgctgagcca ctgggcagca gacacccatg
      181 ccccgggggc gtgcgtgctc gaggaatgga taccagccgt aagactagtg atgaacatca
      241 gtcaggagga tccaaccctg gtgcagggtc aagctttccc ttgaaaaagc agacttgagt
      301 gggaacgagc cctgatgtct tcttggtgtg tccagtctcc caaagcatag ggagagacct
      361 ccttgtactt gccccatggc tcctccaccc caagcaggtc tggccgagcc ctgtgtacgg
      421 ctctgcacga agaggcaagg ctctctgaat gcaaatttca tttctgagcc actggcgctg
      481 tttcaagagc cggcagcctc cgagcccttc ttggtgttac atatgtaaca gcctcattga
      541 acttgacatg tcaaattcag gccatttgtg caaaatctcc ctttaataat accgtttcat
      601 ttcgctcaaa tgagacttga atgcatgtaa aatggaaaag gatatttaag cgctaacatt
      661 aggcagatgt cttgccagag gccgattgaa tatatgagat tttgaagtgc ttaacacgtt
      721 ttcggtgctc cctcttagaa tatgtcacct ggctttcttt tttctcccct ccttcctttt
      781 cccccctctt taagtgaagg gtataaattg aaagaaaaca aaactacaag ccttggtttt
      841 atggggttta actcttgcca ggcaagacca ttggtattcc tcttccaaag agaaattacc
      901 tagtagctca ccttcgcaga gcacaagcac aaagcagcag ag
//
LOCUS       KCKM01002421             999 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38046apa ultra-conserved element locus
            uce-7761, sequence.
ACCESSION   KCKM01002421
VERSION     KCKM01002421.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 999)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 999)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..999
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38046apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>999
                     /note="ultra-conserved element locus uce-7761"
BASE COUNT          248 a          222 c          239 g          290 t
ORIGIN      
        1 tttgaggagg aattattaat aatttcttat actgtaaata gtattctatg gagaaaacct
       61 gttaagggct tgtttctaag aaatgtttag gggatgaatg tcacggagaa caaaacatgt
      121 ggcagcatag agcaagtact gcttggagat gttgcatcct aaagccgatg acattcagac
      181 aaagtgggcc aagcctagcc ctggtgtaag cagctagtgg tgcacccagc ccagtatccc
      241 accacctgct caagtgaaag ctagttttta tccttgtctt ccgcctggca attgtttgga
      301 tgcaggagcc gggcacccgg gctggaaggg gtgtgtgcga ggacattgga ggagaattag
      361 gttattacat ttcctcctta attcttcatc agggctgctg cctgtatttt ctacagaaaa
      421 atcaatgcat tctgattctg taatttccca tggtgcctcg ccaggcgcgc ggcgtgccgt
      481 gggaggtgac atatccggtc atggcagctt gaactctttt ttccagtgaa agaattcatt
      541 ggaatttcac aacctttgcg tgcttttgtg aaaacactca tttgtgtttg cgccaacctg
      601 ctaatggcgg atgccggggc ttgcgaatcc cacctacatt cggtgctcgt tatggcatgg
      661 aatgtgccgt taataatgca tctgtgaaac tcagctgcga gggagccaag taattatccc
      721 accgtagcgt tccctgcttc agtgtcatca caactggggc ttcattaaaa gtcctaacag
      781 tagagatgtt gtgtggtgca gcctgtatat atattttttc atttaaatta tcagcaatgc
      841 catggctcag aggtaatttg actttttgaa accatggagc ccctgtgaat ttccttcctc
      901 ctctccctct cgctgctgca ccagctgatc agccccagaa gaacaaaagg tttatctgaa
      961 gctatgaagc atatattcac cagcttctgg cgtctagat
//
LOCUS       KCKM01002422             253 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38062apa ultra-conserved element locus
            uce-6337, sequence.
ACCESSION   KCKM01002422
VERSION     KCKM01002422.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 253)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 253)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38062apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>253
                     /note="ultra-conserved element locus uce-6337"
BASE COUNT           73 a           41 c           77 g           62 t
ORIGIN      
        1 ttttgcagac tttttgccgc ggatatttat tataaccggg gaaacaaagc gacggtcttt
       61 tcccattctt acaggattgt ctttgtctag ctgcttgttt tgatgggtgt aaaacaaata
      121 agattagact gagcagccga actgaaagcg atagctggga ggaaaagcca atgaaaggtt
      181 gccggggaaa cgagcagagg ggaagctgag tgggggagca ggtggcaatc atgtgggaat
      241 actgcaaaca gtg
//
LOCUS       KCKM01002423            1025 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38078apa ultra-conserved element locus
            uce-2790, sequence.
ACCESSION   KCKM01002423
VERSION     KCKM01002423.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1025)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1025)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1025
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38078apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1025
                     /note="ultra-conserved element locus uce-2790"
BASE COUNT          306 a          198 c          211 g          310 t
ORIGIN      
        1 ctgttatctg ttacaggcta agaacttaat gccccatttc tcaaatgagt ttttgcagta
       61 acgagatagc tgtatcacgc tcttaagtga aaagctcatg aacttgcctg catggttatt
      121 tccaacctct actcttttaa caagctccca aagttgttgt ttataaaagt ggaaaataga
      181 cctgataaaa atgtttagtg tacagggctg tgttttattt atcatatcac aaaagaacag
      241 tgttttgttg catcatgatc aaaatagaag caaccttgct tgttcatgag tgctcaaagc
      301 ctagagataa gaggcaaaat aatagagtac aatagaaagt gtgtagtgta attatttgtg
      361 gcttgtcaag tgaagccctc tcaggccccg agtgattcaa atctgggaac tctgcacaat
      421 tctgtacact aaccatagcc agcatcagag aaatctcacc cagcttctcc gacagtactg
      481 aaattgcatc agtttgtcat gcactgagca tgccagcttc acacaatatc atttgcttgc
      541 aaatgggcct ggccccaacg ccctgagaca cattctttgg tatctgactc ttggcctgtg
      601 atttgtcatg tctctagtgc tatcggcgta aagtaatttt aatagattct gatggtttgc
      661 ttgtggaagg taaagaatgc actacagatt gtgtcaggta actttctatg gcatgtagca
      721 tggtagaggc cctcatgatg gtgatagcca aacaaagagt atggagaaat aagatcccta
      781 ttttgagtgg tatttaacgc tccccttctc aacaccctgc tgtggacatc cttgcgaact
      841 cagcaggttc aagaacttag cagctcgaca aagcagggtt atttgtgctt aagagttgtt
      901 tacaaatgga acatatagcc aaaaatcagt gggtttgttt ctccctattc caaaataaat
      961 agggtgtgta aaactgttaa ttgatttaca gggattaaac tgtaaatgga ttgtactcta
     1021 aataa
//
LOCUS       KCKM01002424             502 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38094apa ultra-conserved element locus
            uce-5132, sequence.
ACCESSION   KCKM01002424
VERSION     KCKM01002424.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 502)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 502)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38094apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>502
                     /note="ultra-conserved element locus uce-5132"
BASE COUNT          153 a           89 c          102 g          158 t
ORIGIN      
        1 ttgctgctgc tcagaacccg ggtgggcatt tacatctaaa gatatttgtc tttaatgaat
       61 tattgctttt taccaggttg cgtgtgtttt ccatgtgagg catgtcagcc accccagtaa
      121 aaaggatctt aggaaatctc atttaaattt caaggacctc ttagggatag ttgctaatgg
      181 ttatgctaat tggcataggg tctgagtgac agttatgtcc tggaatgatt cgcaaatcac
      241 attttcttgg agcttattag cagactcatt aactgtacaa cagtacatta ctttcagaaa
      301 ttcagatcta agcagaaaat taaaattatt tgctaaatga cctaataaaa ttgaataaaa
      361 tgtgctgagg aagtgaaacc tgaggtatat caggactcca aaattgggct aaaaataatc
      421 tccgtttacc actgatgttc acccctcttc tgggaagagt tgtagcccag gtgagactct
      481 gttagaaacc tttgtagata ca
//
LOCUS       KCKM01002425             713 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38110apa ultra-conserved element locus
            uce-7483, sequence.
ACCESSION   KCKM01002425
VERSION     KCKM01002425.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 713)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 713)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..713
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38110apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>713
                     /note="ultra-conserved element locus uce-7483"
BASE COUNT          189 a          142 c          155 g          227 t
ORIGIN      
        1 gtggtagtgc agcagattag gcacgcatta taattaatgc caccagctct aaaaagacat
       61 tggggatgta gtgtgtgctg attatttctt ctttctgttt atacaagatt tctctccttt
      121 gcagcgctat ggctatgcca aggaaagccc ccgagaccga gctttagccg ctgctcctct
      181 gtaactgcat cattacctca ctccaaacaa agtccttttt ttgtcaacag aggatgaaaa
      241 cattattggt ttcaggagct catagtagtt ctgtatgcag ctagggctga ggaggataga
      301 tttatgaaat ggaccatttc aaatggcatt atcttcccac agtgaggtac acctttcata
      361 aatcatggga gagcactcgg aaacaaaaca tttgttattc ctgccatata ttgtatttgc
      421 atcctccaca ctgtgatctt gggatggggg cgggtggaga attctctgtt tgcatttgtt
      481 cttctctaat aattagggcc ttttgtccag aacaaaattt ctgaacaagc tttacaacac
      541 aagtttttaa ctttccttta tttagctggg gggacacatt gagcctcagt tttctagttt
      601 gaatatgaag ccagctgttt cttacatact tccagtattg tagggcattc tctgcctcat
      661 tatgtaggag gaggtcagct ggaaagagga gttcgagtgt agacaaaaaa ctt
//
LOCUS       KCKM01002426             762 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38124apa ultra-conserved element locus
            uce-3028, sequence.
ACCESSION   KCKM01002426
VERSION     KCKM01002426.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 762)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 762)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..762
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38124apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>762
                     /note="ultra-conserved element locus uce-3028"
BASE COUNT          258 a          133 c          122 g          249 t
ORIGIN      
        1 tgtaagttac taggctttta aagtttagtc tatgttatat ttgattactg ggatatcaat
       61 acaattaaag tggaggaatt tcaacagtaa ttttgaagaa gttttagtac atcatgttgt
      121 gcaaggcttt ataaaagatt tttgtttcca aagatgttat tggggtccac atattcctta
      181 acagatctca gcattcccag gccaacatca gagatgcttt ccttcatcca gcgcttccgc
      241 aatttgccta ctggaaaaac aaaaacaaaa cgtttcaata tatggcagga ttctaggagc
      301 caatcaatct tgtgaccatg aatgaataaa cactgtgtga taaatgcttt tattcaaaaa
      361 tgagaaatgt tttgctttat ttgatttatt gagcccacca gactatcaag ctcattaagc
      421 tcagcatact cccagaggaa gactgtgttc cacactgtct actttcttta gaaactatga
      481 aatttagatg aagcttaggc tgagatcaca taattggtag taagttttta aaagccacca
      541 aactgatttt aagtaggaaa ctgtggagga gattactaaa aagcagaaca cctcttgatt
      601 gctttaaaat gaaaacataa ctcaatcaaa ccgacttaaa actaggtttt aatctcctcg
      661 gaaaacaatt ttttgttatt tataccaata ctgttttaaa tcaacaaaat atcttatttc
      721 cttcaaaaac ttttacacag gctggtaatt gttcacacca tt
//
LOCUS       KCKM01002427             413 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38139apa ultra-conserved element locus
            uce-4921, sequence.
ACCESSION   KCKM01002427
VERSION     KCKM01002427.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 413)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 413)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38139apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>413
                     /note="ultra-conserved element locus uce-4921"
BASE COUNT          153 a           88 c           57 g          115 t
ORIGIN      
        1 acagagaata ttgtaaaata aaatgtaata ctttactttt ccgtatctgt actgtttcat
       61 cagtctgata aattatctac aaatgcataa aactaagcaa cattgtccaa tgcactcaga
      121 atggtcccaa cttcaattac aagtaaacca cattaaagat ttactgtaca gtaaacaaat
      181 gggtgaaaaa ctgtaattta ttgaaactca taactcaaaa aatataagat gctgtagtgt
      241 acaatatgtt acacaaagca ccctagggtg cacattcaag tcaagtaact ccatcgcccc
      301 ccaaaccctg gtaccctagt acttgttcca tatacaatca tgcacattta ctcttcaaga
      361 ggaagccccc agaattctga tgtgttaaat agcaccaaaa ttggcatagt cca
//
LOCUS       KCKM01002428             656 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38154apa ultra-conserved element locus
            uce-4124, sequence.
ACCESSION   KCKM01002428
VERSION     KCKM01002428.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 656)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 656)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..656
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38154apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>656
                     /note="ultra-conserved element locus uce-4124"
BASE COUNT          223 a          100 c          125 g          208 t
ORIGIN      
        1 atgcttctta gagccttcct taaatgctgg caccttgaga ttataactat ttatgtttca
       61 ccactttttc acatgcaaaa tgtgttgcac gggagtttta aggatcagat tgatgaaggg
      121 gagctcagag ccagacatac agtgtaagag acaaaggttt agtaatgagt tcaaaattta
      181 caaaacacag aagcaaatat ggctttaata catgatgtga ccctttataa ggcttgaaat
      241 tactcttcaa aaatcattct ggcttgactt cagagccgag tggattgtgg gataccacag
      301 attgactttg agtagtgggt tggtattgca ggaatttttt aatttcctgt aactcacaac
      361 aattttcttc cagttagacc ttatcctgct gcagtgtatt tactgaacaa tttagtacag
      421 tgtataagcc agatcagagg cacatgcatg cactcataca cacacacaca tgcacagact
      481 gaggaaaatt aaagtattaa tagaaaaatt taaaatgatt aaaagagaaa gattcagtgt
      541 gttgatgttt acattttttg tgtgtcatat atataatatc taactagtaa ggaggaagaa
      601 gaaaatttgt gctgaaacat attttttcta tttttaagca aataaaaatg gttcaa
//
LOCUS       KCKM01002429             613 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38170apa ultra-conserved element locus
            uce-1708, sequence.
ACCESSION   KCKM01002429
VERSION     KCKM01002429.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 613)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 613)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..613
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38170apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>613
                     /note="ultra-conserved element locus uce-1708"
BASE COUNT          191 a          127 c           91 g          204 t
ORIGIN      
        1 cgaattcttc acccaaaaca agaggaaaga tgaacaacca cattactgag gagtattttt
       61 agtggcaaca aaatcataac catcaaaaga atgttcactg cttgcagttt tctatttcat
      121 tttttgtgtt tctttcccca atcatgtctc aacaattttt tgaaccaagc agaaaaatga
      181 tcagaaaagc tgcatatctc tctactcatg gaataataag cttcctttat gcaatttgtt
      241 agaggttcat tctagaacga cctttttctt atattatccc tttaaatcat cactctttac
      301 agctgaatac acatgaaatg ctctggagtt gtactaaggt taagcattaa agttgcatgt
      361 caaaaatcgt attagtcaaa atcattatta taagccattc tacactcaaa gaaccttgaa
      421 aaaattaagg ttatgcagag agtttgtgag ccaactcttt aatcacacac tgaactccag
      481 atatatagtt tagtacaatt agcagcactg ggctaatggt tatgggttaa atggtactta
      541 caagcacttt tgtttgttta atttagtcca ggctcttgct tgcactctcc cccctccttc
      601 tccttgctct ccc
//
LOCUS       KCKM01002430             720 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38186apa ultra-conserved element locus
            uce-1736, sequence.
ACCESSION   KCKM01002430
VERSION     KCKM01002430.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 720)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 720)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..720
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38186apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>720
                     /note="ultra-conserved element locus uce-1736"
BASE COUNT          210 a          136 c          185 g          189 t
ORIGIN      
        1 tgcaggacat gtattccacc tcaccaaagt cagctggttg cagctgaaaa gcttctaaga
       61 ttttaaaaaa taaataaatc gttgtggagg tgctcaggca gcatagcaag cacaagcctg
      121 actttttctg gttttcgttg aaggtagcag ccctcagcaa cagggaggca gcgtcagttt
      181 tgtcagtcag gaagcatctt ccccagcaaa gattttggtg agcagcgttg tgtgggtaga
      241 gtgtgccgtg ggagactacc gcgggctgat atgagagatg atatcggaga ttagttaacc
      301 gtatgggctg agtccctggg gaggtgtgtg aaatgaatca gattaaacaa aattgataat
      361 gtgaatactt aatcaaacag acaaaggtag tctgcacagc taattagggg caaatagagc
      421 gtccctcttg tacctcattt aactgacaaa ttgtgcagac agttttaatg ggagtctgtt
      481 tagcaaagag aaggctgtac agttgacagc ttggcaaaat gtggtttctg taacaccaca
      541 tgatgcttat ggaaattagc ctggtgcagc tgagctctga gtaggtgaga gctgcccata
      601 ctctagtaaa atggtaaaat gaaccttttg caggcctcca ctcctgactt cttaaaggga
      661 cctagctgct tttctgcaag ctcacaagga gcctttctga agaaatataa aggatagcta
//
LOCUS       KCKM01002431             824 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38201apa ultra-conserved element locus
            uce-2835, sequence.
ACCESSION   KCKM01002431
VERSION     KCKM01002431.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 824)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 824)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..824
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38201apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>824
                     /note="ultra-conserved element locus uce-2835"
BASE COUNT          262 a          166 c          153 g          243 t
ORIGIN      
        1 tgctgcacat ttttctccag ccactcacaa ataacagaga tctcgtggtc aaaagttgcc
       61 tgataatttg gcatagaggt gtaaacagat aaagttcatg aagagggttt cttgtagaga
      121 tggactgagt ttgcagttca atttttcccc ttctgttaat ttcaaagaca agtgtgccag
      181 actcctccct ccacaggtga agtcagcaaa ttggcaggga cattacagag acttgctttc
      241 aggaaaaggg ggaaattttt tctaactgtg agcaccatta cccctcacct ctgaaccgag
      301 aaagacttta cgtggtgtca taatttagca aattacttcc tcaaaggaag gtcaaacatt
      361 ttaccattcg atcaatagga agcgacttac aaatcatgtg tattgatcat tgtaatcatt
      421 cagaggaatg tagggcagac actaaaatca catgcactta gtcttaattg cccacattaa
      481 agcaattatg ccccaaaact gtcattgtct aatgctatgc acactaccca gcatggtaac
      541 ttttagccat acatatttaa tcataaatca gcctcttagg tctgttgcac taaagaccta
      601 caatattgct gtaattatgc aaatataact atgtcttttt tcatcaacat gtaagatcat
      661 gttgcttttg ggagccaagt ggaggaaaat aagcccctac attaatgcag ctggtattta
      721 atacaagtat tttacatctg tgctatgtgt tcatgacaca agtacttaaa gtgacctgaa
      781 attgctaatg aacagagagc ctttgtaaaa gcagccacag gtca
//
LOCUS       KCKM01002432             264 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38216apa ultra-conserved element locus
            uce-1295, sequence.
ACCESSION   KCKM01002432
VERSION     KCKM01002432.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 264)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 264)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38216apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>264
                     /note="ultra-conserved element locus uce-1295"
BASE COUNT           91 a           41 c           33 g           99 t
ORIGIN      
        1 gagttaatta acaacttatt aattagatag aaagtctgaa actgttgtac ttctagcaaa
       61 tacataattt tcttcaagta ttattaaagc gtttttgttg tacctattaa agattcttgt
      121 ctctaagtta atttcattat gctaataagc tatcatcgtt acagaaccta agctttgatc
      181 catgttaatt gtcgtgatct tcaaagacaa agtcaccact tactttaaat gaattttaca
      241 tctttttaaa gaatcacacg gaaa
//
LOCUS       KCKM01002433             789 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38230apa ultra-conserved element locus
            uce-7582, sequence.
ACCESSION   KCKM01002433
VERSION     KCKM01002433.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 789)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 789)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..789
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38230apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>789
                     /note="ultra-conserved element locus uce-7582"
BASE COUNT          267 a          144 c          135 g          243 t
ORIGIN      
        1 aagcctttac aaaaaaatta ttatattatc ttgtgttgtt gagaaatctt ttttatcctg
       61 aataattcaa tagtaaaata taaggagagt tgttttttgt ttgtttgggc taaagaaaaa
      121 tattctttat ttcataatgt atttaaggag aattttaaga agtgataaaa gcagtgaagt
      181 ctgaaagctg tacagagaaa atacctagta gcatctgaga ctgagcacga tattctcagt
      241 gtcagcatac tgatgaccca gatggtgttt gtacgtttga agtatgacat ctttactcct
      301 ctgtcatcca acacaagtaa ttaacaataa tcaagtgggt gttaattgga tataatggaa
      361 caatctccag tcagcctgag cctactattt gcctcttact agtaattatg aacactaagt
      421 actcacgcta atctccttct tctcactgaa gccaaacaga ggtgcagtat ttactcagct
      481 gatagcttgt tttgtctgca atttagtctg ttttaagcca agaaactcat aatttgcaga
      541 gccgtcacca gctgccagga tcacacaaaa gaatgcaagg ccctagatga cagcaattca
      601 gtatatatca tccaggaaaa taaaacaatt attacttaaa ctgacctgtt acaaccacag
      661 tagccacaac acctggataa gtaaacagtg aaaactattc tttgaaaaac attcgagaag
      721 ttcgcatttc ggatccctat ttttcatcca gaaggcatgc tgtttaaaca gaaaacttcc
      781 aaagttgct
//
LOCUS       KCKM01002434             469 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38244apa ultra-conserved element locus
            uce-4330, sequence.
ACCESSION   KCKM01002434
VERSION     KCKM01002434.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 469)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 469)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38244apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>469
                     /note="ultra-conserved element locus uce-4330"
BASE COUNT          157 a          105 c           95 g          112 t
ORIGIN      
        1 tcagaattaa aataaaaggc agagacgcag cgtgcacccc tggttatact gttggctggc
       61 tcggcgtgga ggcagcctgc agttaatcag ccttctttct ccactaactg tcactgcaaa
      121 caaaggaatt agcagaaggt ctgtagggag cattgagata atttggctgc ctgaagaaaa
      181 gagaaagaaa agaaaagcaa aacaaaatta ctgagaaatt tacttgcact gacctctcca
      241 taaatattta gatataatca tcattactgt gaagtaaatt aagttataaa cagtctccac
      301 aattgcacat gatgaatgca tgtcggcatc agagagcact ttattgcaag ttaatgtgga
      361 aacagagcac ctcaatcaat caggatgcag aagtgctgtc tgatgatatc agcccatctc
      421 aacctattca tactggacac cgtacgctcg ctcacccacc cacacccgc
//
LOCUS       KCKM01002435             701 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38260apa ultra-conserved element locus
            uce-5565, sequence.
ACCESSION   KCKM01002435
VERSION     KCKM01002435.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 701)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 701)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..701
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38260apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>701
                     /note="ultra-conserved element locus uce-5565"
BASE COUNT          193 a          125 c          145 g          238 t
ORIGIN      
        1 tatgtcttca tagggaaagg ggagaaacgg acatactgac ttgctaagaa atgtttgatt
       61 aatatgtgaa gtaatctgtt cctgaagaaa gctattcctg aaggaaccgc acagcataca
      121 taaatcccgt tacttctcta tccccagata tatttatcat tgtgtttatg gtaaacatag
      181 gtagattaat agatacatgc atagaatcct acgtacttat tgctttaagc tattgcatgt
      241 tcaaacagat attgaagccc agattagcct ttttttgcat gtgctagtag tgtgcaaacc
      301 ttttaaaggc atctatgaat tattgctttg gttcagcatg agtgcagtaa gaagaaatgt
      361 acctcatctg taatacactg tgtagactaa tatcagcttc tttttttctt atattgcagt
      421 gagatattga tctggtaaaa tggtaccata ttggagctgt ctgttgtggt attcatcatg
      481 ctgtcacatc cctagtgcct tggagttatt gaaaagcgga attgagggag ttctgtcatt
      541 gtgtgttgca atccattcat aagaaagttc actaaagcat ctgaagtagt gttctcgctt
      601 atttatttat ttacccctag cgagagctgc ttcccttctt tggaggtgca gaaccctcct
      661 gtttcaggca cggggacgct aataggtttg gttacctctt c
//
LOCUS       KCKM01002436            1200 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38276apa ultra-conserved element locus
            uce-3743, sequence.
ACCESSION   KCKM01002436
VERSION     KCKM01002436.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1200)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1200)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1200
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38276apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1200
                     /note="ultra-conserved element locus uce-3743"
BASE COUNT          364 a          299 c          279 g          258 t
ORIGIN      
        1 catagcacac cacataacct tgtgccttat ttgcattttg cgtgaaaaga gcaagcaaca
       61 ttaagttaaa tcagaaatga aagcagaacc cattctaaca tatggggaga caagagcccc
      121 ggttctcctc ttggacacaa tcacagctcc tctcagggcc aagcagagct gggagtgcac
      181 aagacaggaa gagggctctt ggagaacaga agaacctgct ttaaggacac gacacagagc
      241 tacaataacc agggagagag agaaatagaa agagacatac tggagaagct gaccattgcg
      301 aaatgctgac accggtctcc tgtgaattcg atcggacacc taccggaaga aagaaaacca
      361 gaaagagaga aacaagatag caaaatgaca cccaaacaga ccaatctgag gccctttctg
      421 atcccttcca tgtctcctat ccatctgctt tcagccttca cccttacctg catccctaag
      481 ccctaggcca aagctgacac caagagccat ccctgactag accactctac atccaccgct
      541 gtgcccggga ggttttaagt agtgtggtgc attttttgtc ttcaaacata ctttgcttag
      601 gatctggcat gtacaatcgc aaaggcagtt tctccaaaca tctctgtccg aagaatccat
      661 ttggacatct ggaggggaaa aggggagaaa tcacagaaca tgtctggcac cattcttgag
      721 gctaaggtca gaaataaaaa gtgcattgtg atgaatggaa aaaataaagg ctttacgtgc
      781 atatttactc ttcaatttgc tttaaccagg cacctgcaac atcagcattc cagctctggt
      841 tttggcctgg gtcctcaagc agccagccaa acccctcctt tcctcctctg cctgcctcct
      901 tccttctcac ctgctagaag caccagctgg caggaagatc gagatgggct ggatgctact
      961 ttcagagact ctccttggag ctgctatcta gacaagactg gcaagaagca ccacagagca
     1021 gggagcagct gctgaggcga cagcgagtgt tgtgtagggc aagcgtcttc ccgttcctac
     1081 cccagaagta cccacaggat gttccaggga aaaagggtta tgctgcagtt agagagaaag
     1141 catgtgcaga gtctctgtgt taacagagag aaagagacag agaagaaagc tgaactgaac
//
LOCUS       KCKM01002437             885 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38292apa ultra-conserved element locus
            uce-5781, sequence.
ACCESSION   KCKM01002437
VERSION     KCKM01002437.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 885)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 885)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..885
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38292apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>885
                     /note="ultra-conserved element locus uce-5781"
BASE COUNT          251 a          177 c          158 g          299 t
ORIGIN      
        1 cctaataatt tgcatgaata tgaaatttat actaattaca gaccttagct ctttctattt
       61 tattaacaca ccttcattaa gtgttcttaa ttttaagtct tatcctacat tttgtggcag
      121 tgtcttagat ataggtatta atccattata cctagtgttc gatgtgtatg gctttataag
      181 cacttcagaa tcattaagac cgattctttt tgcttgtgtg cgttgtggta gctttcataa
      241 ttcatttgtc gtctaaacta gtctttttaa agcaagttta taaataatat tccaatataa
      301 cacattaact aggcagctct agcatgcatt tctttttata cctctcagaa aatagcttct
      361 taaaacagtg acaggctgtt gtgaaaaaga aaggggggaa atgtaggtca ggtctgtcac
      421 acatgggcta ccattacatg aagtgatagg ctgtctttct gctctggcct caggatagga
      481 gtccctcagc cttccattag aaccttcaat aaatgtatat ccaccctaca tgttaatggg
      541 gggagtcaat aatagtgtct tgcctgtggg gaaaacactc cgtcgcactc tgcagtaaca
      601 cactctggcc cagcattgac gtgtagccac caccactttt gaatgtgtct gataaaagcc
      661 cactgtctct gcagcttgtt attgaattct cttccattgt acactggcac accatcagac
      721 ctttctctct tgtgctgatt tttaactccc ctgccgctgc ggataccaga actttgagag
      781 acaaaggcgt agtcattctg gcagatatgc atcactgcag gataaaacga atgatatata
      841 attgtatata gttagtatat aatttatagt taaataatct tatat
//
LOCUS       KCKM01002438             974 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38308apa ultra-conserved element locus
            uce-1210, sequence.
ACCESSION   KCKM01002438
VERSION     KCKM01002438.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 974)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 974)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..974
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38308apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>974
                     /note="ultra-conserved element locus uce-1210"
BASE COUNT          322 a          166 c          175 g          311 t
ORIGIN      
        1 agtaaattat tgttcctata gagataatgt tccttatgtt ttggacagca cactgcttca
       61 ctaggaatta aattgtaatg ttgttgccta gcatataatt cagcatatgt tgtgtcatat
      121 gccctggagt cttagcacac ccacaattac tgatgaattt tgaattttca acctttaaca
      181 tatgaaactt agccccccca aaatccccaa acctaaagct atttgaaaca attactaaat
      241 ccaagcatat cttttttttt taagatttca ataaaatgta acattcacag aaaaatctca
      301 taaatgtcaa aattgctatg ggcagaatag gagggaatac agtattttct tgatctgctg
      361 tagcaattta tagatttcaa aatgtggttt ataagaatgc taaatgttct ggaattacag
      421 ctgttactga tcagtgattg agccagattt gtgttattgc accatgttct tgcttgtacc
      481 tagagagcag taaagcctca atataataaa aagcacctgc attttaaatg aaatttcaat
      541 tgaaaaactt aacagccctt caaattgcag aatttaacgc agcccagtaa agcttaaata
      601 acactttgcc tccacaggct gagggttttg cattcaaggt gacttgattg tgtcgcatgg
      661 tgaaattatt tacaattaag gaatttctct ggagggctgc agagtatttg ctgttccaca
      721 acacctatgc aggcatatgg tcggtctttt tcagtattca tggaagctcc tgaaccttta
      781 tgataattga atcagttaga gtgctgagtg gagcaagcat aaaacctgtt aacctaaagg
      841 tcagatctgt gcattgttta tttatcagta ggtgaaagag ctaaatcggc agcttctgtc
      901 acagtcgaag taaaaaatca cctataatat taacagggag tagataaatt gcaaaaaatg
      961 gattagaatt ataa
//
LOCUS       KCKM01002439             608 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38338apa ultra-conserved element locus
            uce-5182, sequence.
ACCESSION   KCKM01002439
VERSION     KCKM01002439.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 608)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 608)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38338apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>608
                     /note="ultra-conserved element locus uce-5182"
BASE COUNT          156 a          139 c          160 g          153 t
ORIGIN      
        1 tgagcacaag ataatgtcgt cattgacagc tggggagtgc tgagccccca ccattggaaa
       61 attaggcctc cttgcagcat ctcaagtgag gtgctccaag ctgaagcacc tgaagcctcc
      121 agctgctcca gagtcatggg atgcgagcac tcataaggga aagggaaaag gggatctggc
      181 aactggaact ggtgagacag gagagacaac ggcttctgat ttctatgcct ttgaaagggt
      241 taatgctgag gtgctctatt gtattaatga tggttgtttc ttcccagagc ccgttgggct
      301 ctttcagggg cctctcaaaa caatgagtgc agtgaggctg ttctgtctaa ttactccaag
      361 acagggatgc taaagaggaa ttaatgacag ttgacaagtg caattaataa ttatagcaaa
      421 gctgggagtc atgcagcagg cagatgacaa taacagggta actgtacatg acagctttca
      481 tccgttcctt ccccccaccc ctcccgcctg cttcttcttt cttttaccct ttaatgtgag
      541 ctgttgcatg cagctgggct gcaccgtgtg cggacaagga atgagtaggc gctgagatct
      601 agccactt
//
LOCUS       KCKM01002440            1030 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38353apa ultra-conserved element locus
            uce-6565, sequence.
ACCESSION   KCKM01002440
VERSION     KCKM01002440.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1030)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1030)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1030
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38353apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1030
                     /note="ultra-conserved element locus uce-6565"
BASE COUNT          331 a          200 c          158 g          341 t
ORIGIN      
        1 acatacctat atgtatgcat attttaccaa aaacagacac gtgaagttgc atacaatggc
       61 tgacacgctg tacttaaata gatgcttcac cgacttgcct tgtagcagaa attttctgag
      121 agaatagtat ttcacaacag taaataatac ataacatttc ctaccggaag atgccactta
      181 acagctgcaa ttaacacttt ttttaagctc ctcaacatag aatttaatat ttgttgttac
      241 ttctctaaaa caaatataag atcacagaca tagttttcat ctcctggact cttctattcc
      301 ctggtgactg caagtattat ataattacag tattcataca tccatcatta attctgattt
      361 aatagtagag tagctgtaca gcacttcttt atttatcaag gtcatatctc gacggctgca
      421 caagcttaga taaatcaggt gttaagcagg cacatctcca aggaatctgg aaattctctc
      481 atctgcaatc ctcagcatat cttattattt actgccaaag aaatgactga ttaattttgt
      541 catctttgct ctgtgatttt tgctcagctg aaactgcctg ccctcttctg caatgcctga
      601 tcagacctat ttaagttgat gcctttgatc gtagagactg aggagcttgc tgacttaggc
      661 tttgactaaa cattcctcca ctgcaatatt catgcacaaa atcctaaatg ataactgaca
      721 gtcaatgtag ataacaaaaa cttttaagtt gtttccactg ttttactgat gctcaaaata
      781 gctttacttc tactagaggt atcagtcaag atgaaaaatt gctatcagga taacaaaggc
      841 ctaacaaatt ctgctttgat gaatagttta tttctcacaa acaaagtatc tgaggtcagg
      901 aaaaaatctg ttactggaaa attatgcagt atgatttttt aaaaatattt taaattcttt
      961 ctgcagtctg gtatcatact tagttttgga agctaggggc atttcactat caaactgttc
     1021 caaacaaaat
//
LOCUS       KCKM01002441             489 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38367apa ultra-conserved element locus
            uce-6135, sequence.
ACCESSION   KCKM01002441
VERSION     KCKM01002441.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 489)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 489)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38367apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>489
                     /note="ultra-conserved element locus uce-6135"
BASE COUNT          172 a           98 c           92 g          127 t
ORIGIN      
        1 acacacacac acacttttct tgccaaactg agaggaagct ttgtaatctt ccatataaca
       61 tctgtgcttt ttcatcccac aattaggtga gctattaatt tcttgagtaa aagggatatt
      121 acagcagtat agcagagaga catctcagca gcaagaaaaa aaaaaaaagt gtcaaaatgt
      181 ggatgtgcct ccaataattt aaaaaataga aggtgataag ttgaaaatgt caggtaattg
      241 gcagacagat agaaagttaa actgtgtcct cagtgaagaa aattaaccag cagctgctag
      301 cagaggcccc aaggtcatct gaatgtcaga aacaagtaag ggccaatcat tcagaagggg
      361 tttgctgctg atatttgccc tccctggtca tttccagatc tcccaggaac tgccctgaac
      421 tactgccaac atgtgttcat ttctaaaaat tacacagatt gtgatttatt acccatcaca
      481 ctacaaaaa
//
LOCUS       KCKM01002442             660 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38382apa ultra-conserved element locus
            uce-667, sequence.
ACCESSION   KCKM01002442
VERSION     KCKM01002442.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 660)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 660)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38382apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>660
                     /note="ultra-conserved element locus uce-667"
BASE COUNT          229 a          107 c          122 g          202 t
ORIGIN      
        1 gtcgtaattt tttaatatac tctgaaactt agcagcacca atagggcaat gaaagccaaa
       61 gagcagctga gctattttaa ggtctattct tccagtagtt gggcgcacat cttaaggaaa
      121 aataagaatt aaaaaaaaaa tgacaccgaa ctggtctgtt ttcattgcat tatgcagatg
      181 aaatgacaag ttgtcattta agaagttaat aaacagtcac cattttgcag gttatccaaa
      241 tgctactgaa tagaaaacct tggatcccta aatgatgtgt aattaaaatt attttaaaaa
      301 tcctccttga caggccaggg cttagccaaa atgtaaatga cattaaagaa gacaatgaat
      361 ttaattttat ttaatgtccc tttttgcaga tcctcattta catagcattt ttaacaaaag
      421 cgttgacctt ataaatgctg gcatttgtac agcttctgca gagttggatt taatcatgct
      481 ttcgcaaagc cataagggaa aaagctttaa gttctctggt tggatatgga gtaggaataa
      541 aaacattggg actggtcaaa tgtttatcct ccttgcttct gaaaacaacc tgacaagaag
      601 atgtaaaggt ctagggaata acccattgct gtttgtaagg cttggtaata atcatacata
//
LOCUS       KCKM01002443             495 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38397apa ultra-conserved element locus
            uce-3650, sequence.
ACCESSION   KCKM01002443
VERSION     KCKM01002443.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 495)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 495)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38397apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>495
                     /note="ultra-conserved element locus uce-3650"
BASE COUNT          151 a           91 c          101 g          152 t
ORIGIN      
        1 agaaaaaaaa aaaaagaaag aaacttgcac aaaagaggtt ttgtgtttca agcagaataa
       61 attatagtgt gatgttatta aaacacttag ttgttaagtt gccaagaaaa tccagtatat
      121 tcacacggac tcgaggacct gtctccatgc aaagtaatta aattagattt atgggctgca
      181 ttacatcagt gtttgatagt tcatttttcc tttcttcata ttttgtcctg ctttattaga
      241 gcatgtgaca gatggtaaaa atagtgtgaa gtttcttggc cctgtgctaa atcccccttc
      301 ggtagtatat ctctctcctg tcagttctcc ccagcgatga taaattaacc tctcctcttc
      361 tatcccaagt gtggcagtaa agcactcttt gacacagcac tatcacttta tcttaatctg
      421 tgctgttcta ggggcggggt ggggaaggaa gcgaaaggga gatgatgcaa tcgctaccac
      481 gggtttgaaa aaaaa
//
LOCUS       KCKM01002444             551 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38411apa ultra-conserved element locus
            uce-3163, sequence.
ACCESSION   KCKM01002444
VERSION     KCKM01002444.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 551)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 551)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38411apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>551
                     /note="ultra-conserved element locus uce-3163"
BASE COUNT          217 a           98 c           91 g          145 t
ORIGIN      
        1 ccaccctttc cctctcctcc catgtaacta caattcaaga ctgttaacac gtcaaacgcc
       61 acgctcaaca gcttccttgg gtaagagtta atttgaaaca aatgttatca tagatgcatg
      121 aagctacaaa ctatttctga aaggacaact acagcaaaaa cagtgagatg tactaaagac
      181 ttgaaatcaa aaggaaacaa attgaaatga tacacaaaac aagggggaaa cgctctagta
      241 cagaaactgc tgtctgtctc tccaaaacaa gagctgccat gaagacaatg tatagttacc
      301 tgcatccata tctgcaaaga atggaacagc cagtaaggaa aagaaggaac cagaaattca
      361 gtgtctcaga gttggattta aaagttcata aggagaatag ataaaaaaaa ataatcaaaa
      421 aagtatttag tgtaagatag actctataag gtactatgat atttttgatt tcaagctatg
      481 accttggatt aatgttaaac actacaatat tttcatgtat aaattaattt tctatggcat
      541 aaaaaccttt t
//
LOCUS       KCKM01002445             575 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38425apa ultra-conserved element locus
            uce-4446, sequence.
ACCESSION   KCKM01002445
VERSION     KCKM01002445.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 575)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 575)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38425apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>575
                     /note="ultra-conserved element locus uce-4446"
BASE COUNT          157 a           94 c           85 g          239 t
ORIGIN      
        1 tttggcaata gatgaaatct cagcatgtaa tttgctcaag tgatctttct gaaaaacaaa
       61 tcatttttat gtactagttt atttttttta attgcatggc aaagtaaggc tagtttgtgc
      121 atgagcaagt tgaaatgcta accaaagaaa catgaatttt tcaatttttt tttaaacgca
      181 catttctctg ctttattgaa tgtgacagag tcacgcttct cattcaccat tgcttctctt
      241 tttccactgt ctgtgatttg cttgccagga ggagctacta ttcttactcc tactatctgt
      301 aagtagaata cgggtgactt actattttac atgttttaaa gatgcagtat ccctttttaa
      361 aaaagaaaaa gtctctgtaa ttttcctaaa gttttattga tagttacctt tctttattct
      421 caggcttgaa aaaaggcttg ttccattgtt cctgttattc tcaccctgtt gtttttttaa
      481 agggatattg tatttctaac tgtatattga gactttgctt tttgctacag tttttctcat
      541 aactatcatt ttactttatt gtaatcataa tttaa
//
LOCUS       KCKM01002446             839 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38440apa ultra-conserved element locus
            uce-7474, sequence.
ACCESSION   KCKM01002446
VERSION     KCKM01002446.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 839)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 839)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..839
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38440apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>839
                     /note="ultra-conserved element locus uce-7474"
BASE COUNT          283 a          187 c          126 g          243 t
ORIGIN      
        1 ttcttgcatc ttcaaatgta acctcccacc cagaaaaccc agttaattac aaaaacaaac
       61 acactcaggc cacccttcag tccttcccaa aactacagtt tgacatttaa tttgagtagc
      121 aattcatgtt taactctgtt cttatacttg tattttcatt tagaacaact gtgtaataaa
      181 aattgcggaa cagctcatca ccttttgtcc tgtacccttc ttcccacccc ccacttttaa
      241 gagtggcctt aaagttaagt ttcgacttaa atcaaaaacc acatttacac tgatgtgaac
      301 tcacttgctt gccaattcac cccccggcgg gaggtttggg atgctctcag ttgctaacgt
      361 acgcatcacg tggactaagt ctgggactcc ttcaccctgc ttctttatga tctctgggaa
      421 tcagaagtac tttttttgta agtgcagtcc aaaaaaaaga ttgaaacact cagttttata
      481 aaaaggcagc ttaacttctg ttaatatata taaaaaaaga cgacagacca tattcaacat
      541 ggttattttt aactttggtt ccgtaagaga aagaacctgt aacagatttg acacagatac
      601 acagctaact taacatgcac actggtttta gaaatacaca gctacctaat aaaagtgggg
      661 aaaaattctt caatggtttt cctgtgatac actacatata acagaagatg tactatcttc
      721 ccaacaaaat gccctgggca caaggcaaat attaacacca cctttatcac tgcaatagaa
      781 gataaaagat tatagctatc acagaaagca taatattttc aagaaacaaa aggttagac
//
LOCUS       KCKM01002447            1005 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38456apa ultra-conserved element locus
            uce-3392, sequence.
ACCESSION   KCKM01002447
VERSION     KCKM01002447.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1005)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1005)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1005
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38456apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1005
                     /note="ultra-conserved element locus uce-3392"
BASE COUNT          355 a          209 c          166 g          275 t
ORIGIN      
        1 tattccaagg gagaaaaaaa aagacaaaat gctccaaaaa catatcacct taatttttat
       61 gcgattaaaa catcaggaaa actgttaaaa ctgtgttcta gcactgtttc ttcaaataat
      121 aatcagtcac catttgaaaa agcaattgat agccgatttc agatagaaga ggtgaaaaac
      181 tattgcagcc accaaaagca atacaaattt cagaaaataa aaacaccaga atacgtcagt
      241 aatcgtcatc cgcaaacaac tgcagggagg accagaataa aatcagctct tagaagtaac
      301 attaaaaatt cagctcaacc cctctctttc cttggactct ggattctaaa atgacatact
      361 acaagataaa atagtaatgc taatattgat agtttgtcca ttacaggtca gctaactgtc
      421 cactggaaca gttacaaagc tgttagtttc gatttcacaa ggccaatcaa taccgaggca
      481 tactgtttca attttgtctg cattgatttt tttttataac accccaacct tacagcattc
      541 atctttctga aagaaggaag atttgattta ctgaagaaaa attggagaga gcatcacaaa
      601 gattttaccg gcaagcctgt gacacgggaa aaagatgaat gtctctaagg cagagacgcc
      661 tcttgctcga gggcatccat tagaacacat tcgaccaatc tgaaacagag tttcttaagc
      721 aaccgaaacc tgagcctaaa ctctgtctcc caaactaatc aaaagcattc agggatcttg
      781 atatacagag gttcccttaa aaattcctaa accttattgc ttctaaaata atttatgtct
      841 gcagttctac ctatgcattt ttctgagagg agtaccaccc ttttcccctc taataccaag
      901 agtgaatttc catggtacat tagtcagcct attagaatgc aatgaaggac gatatgagaa
      961 aagggtagta tgtcctctga gacttccatc cagtgttctc catca
//
LOCUS       KCKM01002448             769 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38471apa ultra-conserved element locus
            uce-607, sequence.
ACCESSION   KCKM01002448
VERSION     KCKM01002448.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 769)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 769)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..769
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38471apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>769
                     /note="ultra-conserved element locus uce-607"
BASE COUNT          202 a          144 c          195 g          228 t
ORIGIN      
        1 tgccttcggg tgtcgtgcgc agcgcgagga tctagcaggg gaggcagggg gaggatctct
       61 tacggtttag aaataaaagc ctgtagccag atgtttgtga gagctgcact tgtctgtgat
      121 atggaaacgt gtaaaaactt cagctcctcg catgtggaat ctagatcaat ttttaattta
      181 cttgtacgca tgggtgactc atttaaaaaa gaaaattgtg gcatcagaaa aaaagacatt
      241 tcagtgtgca taggttgctg catttatctg tttctcatgc actccggagt ggaaataagt
      301 cacagtatct taataatggt cttgatttta taaatgattt ttccccttga aataagcaat
      361 ccattcattt taatatgtag aattggtttg ctagcagggc gacagtttaa aaagacttcc
      421 aactgtgaca caagtgcaac catattgctt cctattactc gctaaggtag ttgtttagaa
      481 gagagaatgt tctccctgga aatgtttaaa gtgctgtaat tttatttagg ataatgagga
      541 tttataacag ttttaccata tgaaaacctg cctttagaca gagcgaaata ggcggttgcg
      601 gttattgagt gcgctgatgg tggggctcgc gcgcggagcg gcgaggggag gcgttcgtct
      661 ccggtcgtgc ggcgcatccg tcaccgggcc cagaacattc cccgccgccg cgtgggataa
      721 ttcatcacga gcatgtatgg atttctctgc tttaatcgct ctagatgtt
//
LOCUS       KCKM01002449             333 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38486apa ultra-conserved element locus
            uce-3042, sequence.
ACCESSION   KCKM01002449
VERSION     KCKM01002449.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 333)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 333)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38486apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>333
                     /note="ultra-conserved element locus uce-3042"
BASE COUNT          115 a           48 c           62 g          108 t
ORIGIN      
        1 atattttgta cttttaaaaa gtatcctcat gctaccaatt agagacatta tttaatgcag
       61 gtattttagc attatggtgc cagtctgtat ataaagcaga acaaaaccgt ttttgatagt
      121 tatttaaggg catcctaaat acactcaaga atagtacatt ttaattttca ataatgccag
      181 cagactcaag cattcagatt ttagcataac cagcaggaaa actgtttgat gttttaatta
      241 tgtcccagaa aatgctgaat gtgttataaa agaaatctga agaggggagg ggggttttta
      301 ttactgctca agaggaagga cgttttacaa cat
//
LOCUS       KCKM01002450             829 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38501apa ultra-conserved element locus
            uce-2378, sequence.
ACCESSION   KCKM01002450
VERSION     KCKM01002450.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 829)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 829)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..829
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38501apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>829
                     /note="ultra-conserved element locus uce-2378"
BASE COUNT          244 a          197 c          173 g          215 t
ORIGIN      
        1 aaagcacgag agcgcagtaa atcccgagtc ctgctactac tactgtgctc tgtgtgatta
       61 ctcgaccaag gtcaagctga acctggtaca acacgtccgc tcagtgaagc accagcagac
      121 cgagggccta cgcaagctcc agttacacca gcaagggctg gcaccggagg aggacaacct
      181 cggcgagata ttttttgtca aagactgccc accgaacgag cttggtgagt aagactggag
      241 agggctgtcc ctaagccctc ccccaaagac tctccaaacc cagaacccgt cccccagtgt
      301 aaaacacggc agctcttaat ctctcagaaa tgaacatgtt gttcccatta aagccttctt
      361 tttatatcag taccatacgc agtcctgcat gcggtgacat ctttagcagg catgcaggag
      421 gttatgaaac tctacctagg gaggatctca cagtgaaatt tttcccccca gagtgagctt
      481 taatttcctt tctcatgacc aaagcaattt ggctttcatt taaaagtttc tttgctgcca
      541 gcagctaata agtgtaacag gactgtaaaa cattctgaga caaaaaaaga ttaatagttt
      601 tatttgagag agaccagtaa tttaaaacat aagacctagt cagggtccat tatacaataa
      661 ttccaatgtt aatgctactt tgcaaaatga gcgcttaact tgtttttgct ttggttgacc
      721 tggcgcaggg aaacagctaa cacgttttga atggcattcc aaaactgaat taatctctgt
      781 tccctaaagt gtcctgttta tatatgaaat ccagaaacag atggtcgtg
//
LOCUS       KCKM01002451             682 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38516apa ultra-conserved element locus
            uce-7278, sequence.
ACCESSION   KCKM01002451
VERSION     KCKM01002451.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 682)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 682)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..682
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38516apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>682
                     /note="ultra-conserved element locus uce-7278"
BASE COUNT          264 a          140 c          115 g          163 t
ORIGIN      
        1 aagcctgtga caaaaaaaat gcaacaagtg tgttaagacc cgatcccaaa aatatgtgac
       61 cggctgagca tacacctttt gaacagcttg gtacccaaca tttcaaagaa taagatgatt
      121 tctgcactct cctagccatt tatagtagtt ttatctttac ataacagaag agcaactcag
      181 ctgtcattag cattaggata gctatataac taaggcaaaa tccttaataa acatttaata
      241 aatcactaag gaaaaggcgt tttttccttt ttataagtta gatgtaaaac aaaaaaataa
      301 aacaagagag acttactggt tatcattgct ccagttatag aacccagaaa tccaatgctg
      361 accacaatga cagagatcag cctcccctgc ctatgcctct gcagcatcac aaacattaat
      421 actcccacag caccatggac aaagagagag gagaagagag cccagaggaa aacccagtac
      481 cacatctctg aaagaaaaca gccaaagaaa gggttaatat ttctgagaca agaatgtagt
      541 aagtaagaaa ttttaaaaca ttgcatacaa tcaacagtaa gaggaaagca atactgattt
      601 ccagcttaaa aggaatcaac gtgacaacat cagcatatgc tcaagacagt ttcccccttt
      661 tagcagtctg tcataaagga at
//
LOCUS       KCKM01002452             715 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38531apa ultra-conserved element locus
            uce-7109, sequence.
ACCESSION   KCKM01002452
VERSION     KCKM01002452.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 715)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 715)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..715
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38531apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>715
                     /note="ultra-conserved element locus uce-7109"
BASE COUNT          210 a          132 c          130 g          243 t
ORIGIN      
        1 tgttgtacat ggatttagat atagatacat tcatatgtat aattaggggt atagacattt
       61 ggttaacttg aaagctccac agtgtcgttt gtcacattta tggtaggaac tttaactgcc
      121 ttaaatactt attcttttcc aaagtgactt tttttctttt ccctctacaa aaaaaatgaa
      181 aatgtacttc atggaactat tgtatatgaa gcacttatta gccgtaatta aatggacaat
      241 atgaatttac tacgtcttta ggactctggc ttgttctggt ttagagcaag atgattaatg
      301 caaatacata ttacttgaga taaccattta gcagctaatt tagccaaatt tattacagca
      361 gttagaggtt tttcatttta gcagacggag acaaggacat gacaaaagca ggtggtgtat
      421 gtgaatgcac actgccctct agtgcacaaa gcttcacggg attagtgaga aatgcaggag
      481 agagagtgct ccactaacag tcgtgcccag attttgtgta gtttagtgtt ttttcaaaac
      541 cacgctgctc cctctcagtg cagatttgcc tttctccccc ttctcctcat actgaagcat
      601 cagatacaaa ccaaatccgt ttccacttgg ctatattttg gctgaagtat tacgttaaac
      661 atctgtattt ttaagccttc tggctgtgat catttaataa cactgtttca catta
//
LOCUS       KCKM01002453             422 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38546apa ultra-conserved element locus
            uce-7542, sequence.
ACCESSION   KCKM01002453
VERSION     KCKM01002453.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 422)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 422)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38546apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>422
                     /note="ultra-conserved element locus uce-7542"
BASE COUNT          130 a           70 c           65 g          157 t
ORIGIN      
        1 tcctttgaag aactcaaacc attctattgc tagtataaat gacaagacag ttacaggact
       61 tgcttatact ttcaatctcc acagtagcac atgtttcaat taaaagtaaa attattatat
      121 tctttagttt gcagaatttt ttggtagaat agtacattta tatgttaatt ttgctaagat
      181 caactttatt tatctacagg aagctattcc aagattgttg tacatttttt tcgcttctga
      241 aatgttatca catttaattg cctgatctta tttgggttgc aatcatagtc attaattagc
      301 aggaaggtga gggacagcat catatctaac tatctgttat ggctgcttta atgaggaaaa
      361 tacctgccat cattttaaag gcatcctgta tacttcacaa atacagcttg ctgtagcatt
      421 ct
//
LOCUS       KCKM01002454             505 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38561apa ultra-conserved element locus
            uce-2404, sequence.
ACCESSION   KCKM01002454
VERSION     KCKM01002454.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 505)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 505)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38561apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>505
                     /note="ultra-conserved element locus uce-2404"
BASE COUNT          110 a          122 c          124 g          149 t
ORIGIN      
        1 accagtgccg ggcgcgggca gcaggatggg atgtggcacg ggcacactcg tggggtttcc
       61 cgtctgatgg ctttttcctc ggactgcggc atttatttat ttttttccca accccttttt
      121 tccacgtctg tcccttccat tgagtatccg gttttattaa tgtccagaag cgtaaatcac
      181 ggtcccatat tttgtcattc cagtcatttt agtcactaaa ggattacttc aagtgactga
      241 accgggctgt tatctgttgg agtttttgca gccaggtcat ctccggggac tgggaacaag
      301 ctcactgccc ccgtagctgt gccgagcgga tggcttcagc cccaccactt tttgtgactg
      361 atgcgcagtc acaaaatgcg cgttttcagt aaactgaaaa caaaaataga gaagtagggc
      421 gggaaacttc ccgactgccg attaccttca aaataaatat tttgagggcg gtgcctcggt
      481 tattttatgg acgactcgga ttttt
//
LOCUS       KCKM01002455             872 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38576apa ultra-conserved element locus
            uce-1053, sequence.
ACCESSION   KCKM01002455
VERSION     KCKM01002455.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 872)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 872)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..872
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38576apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>872
                     /note="ultra-conserved element locus uce-1053"
BASE COUNT          282 a          164 c          133 g          293 t
ORIGIN      
        1 gagataaaaa tcagatttgt aagccacttg aggcccaatg ttctcttcaa gttcataggt
       61 tgcaaatgat ttatagtcac catttcgtat ttagcattcc attttttctg gtaaatactt
      121 tataaccaaa ccattctcat gtttctgaaa tacctttgct aaaatggctt aatacaactc
      181 aaattgcttt atattaaagc aaatttaaat aaaatgtccc tctgcttctt tacagaaggt
      241 aaaaaaactc tgtatatctg gtgcctgtat tcctgttctt tcacattaga gctgtaagtc
      301 tcctctttca ggtcacgtct tccacataaa agtgctaaac taatgccgct taatgacaaa
      361 ttaatgtcca tgaataaaaa atacacctct aatagcatag agtaatttgc cattacaata
      421 tcatcattgg acatgcccct ggtttaatac gatgtattta attcataact taatgagtga
      481 tatataaaaa gagagagatg aaccctgcaa ttacatttat gtgagtctgt caccttattt
      541 gtaaaacctt agagtcattt acattcaaat tagaacaaat gagtgatttc acaaagtgca
      601 gtgacaaatg accattgctg cataagacag aactgtattt cctgtgaaaa cattaacagt
      661 ttcctattat ttgttaaaaa ttacaatgca tattgcccag tgttgtgtga ataatgactt
      721 ttttactgat taggtcagaa gactaatatg gagtaaaaat aaataatttt tcttttcatt
      781 ttttccgatt ttagctcgaa tttatctgct ccaactgtta caggctcaca ctgccacctg
      841 ctgcccacgc ctggggagga agggccccga ct
//
LOCUS       KCKM01002456            1070 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38590apa ultra-conserved element locus
            uce-422, sequence.
ACCESSION   KCKM01002456
VERSION     KCKM01002456.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1070)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1070)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1070
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38590apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1070
                     /note="ultra-conserved element locus uce-422"
BASE COUNT          325 a          241 c          212 g          292 t
ORIGIN      
        1 tttcactccc tctcttctgc ctcctcaaac gaaagctgcg tctccgcgtg tgtaaacatt
       61 cccttggtaa agcggacgaa gctgcacaag agtagttttg tagctaaacg tggagcggac
      121 agcatttgcg agagaagagg aagctctggc atgcacctcg gaacaaaagg gaacaagtgg
      181 tctttactcg gagagcagct tcctattaag actcactcct tcgtacatta tgcctttcat
      241 ccccactcaa ccacaaaatg attttgctgt aggaaataca atggcagaaa aagatttaca
      301 ctgaaagaat ctttaataat aaactgttgc agatctgcct acttccccat gatttataat
      361 acaataaaca ttggattcta ttaagtctca tgaactgaag acacgcactg aaaacccgaa
      421 tatgaaagcc gtcgattctt cccgtcgcca gcaccataat agtgaaatga gcatgtataa
      481 atgcgctaag agtatctctt tgcatctttt atagcttgtg tgtattaatc tgtaaagctt
      541 attaagaaag tcattgctat gcaaagcagc acccaatctc tttctctcgc ttttcaacag
      601 cacgcagtgt tgagccaata ggaccggtcc cccggccctc attgcgcatt cataacatgc
      661 aacatttgca caatgtatct ctcaaaggcc actgaataga aagccttaat actcatgtaa
      721 acaactgcaa accaattact taatgaatca ggcccacaca taatgaggtg ccagacaaag
      781 agctataaat gcatttttgc gcccgagcct ctgctttaaa gtaaaatccc tcagctgtag
      841 ttcgggctta actggcacat cataattatt gtctggagga catcagagaa gccatttttt
      901 gttttttttt tatttgggtc cggcagggtg ttctgcaggg tcactcatca gctcagtgac
      961 aaaacggagc aaagaagaat ttataaaaag tagcacagca gtgtgacgcg gttatgttta
     1021 ttctcaagta gtgggtttcg agatcacttg taaaagcaat aaagcccgag
//
LOCUS       KCKM01002457             777 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38605apa ultra-conserved element locus
            uce-212, sequence.
ACCESSION   KCKM01002457
VERSION     KCKM01002457.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 777)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 777)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..777
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38605apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>777
                     /note="ultra-conserved element locus uce-212"
BASE COUNT          271 a          140 c          132 g          234 t
ORIGIN      
        1 aatcagctgc caagaaggta tctgttacgt ttatataaat tagtattatt gttgttttta
       61 tcgctgcact tgctgcacct cacttccgta actggttaaa agacaatatg caaaccccca
      121 aactcccaag tattcgtaag gtataaaata atggttttaa aacaaatcac ttgacagctg
      181 caaatgcagg ataacaccta gttacattat agaaacagtg tggataatta cttttttcaa
      241 aaggaaagac tccatggacc acggtcctgt ctgaatttcc ctgcagctca gataatgcgc
      301 agtaatacaa atcctgttgt cacctcaacc taagtctttt tatcatctat acatcagtaa
      361 gaatgatgag agacgtccca tgattctaac agtcttcctt tgaaggatcc acatgttaat
      421 tactgcacta attatggttt ttgaatagcc aaatgaagta agcagtctat gggaggtacg
      481 ggcataaacc taagactgag aaaatactag ttactgaagt catcagtgta aactgacaca
      541 ttgaacatgt ttaaaagaag tagaagtagt agattttaaa agacaagcat cttcaataat
      601 tagggttcca tacaggaaaa agaaatgtta tttcttaatg gcaagtgcat ttaaactgtt
      661 atctaaagat ctgaaggtaa gcctgcttaa ttcactgctt cttcttttgt tattaggaaa
      721 acataattgt tccaaataat tagcactaga gtacatcaca agctgacaac aaaatta
//
LOCUS       KCKM01002458             324 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38620apa ultra-conserved element locus
            uce-2690, sequence.
ACCESSION   KCKM01002458
VERSION     KCKM01002458.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 324)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 324)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38620apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>324
                     /note="ultra-conserved element locus uce-2690"
BASE COUNT          100 a           58 c           63 g          103 t
ORIGIN      
        1 tttcttttct tttttttttt aaagaaaaga aattaaatga aatggatatt agctggaaac
       61 atctgtgttc accacagagc aaaatgcata ttcagcagcc agtttattgg ctctttagag
      121 gatgtgaatg gtgcattgta aataatgaca cgcctgtaat aaattcccag taaaaaagag
      181 agggggactg agcctgttcc tcccacaatt cacatttctg ggtccctgct gtgagtgatg
      241 attcacagca gtcacaaatt cctgttttca aaatgctatt gtatactcca gggctttcat
      301 taagttttac actagcaagg gaaa
//
LOCUS       KCKM01002459             572 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38636apa ultra-conserved element locus
            uce-3273, sequence.
ACCESSION   KCKM01002459
VERSION     KCKM01002459.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 572)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 572)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..572
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38636apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>572
                     /note="ultra-conserved element locus uce-3273"
BASE COUNT          174 a          101 c           88 g          209 t
ORIGIN      
        1 aaattttatg tatgtttcag aactcttggt taataaaatc acacagttac ttccaaatgg
       61 ctaagattta tgactgtcag tgagtgatta agttaggaac tttcttgtct gtcttttcct
      121 gtttgatttt tatcgtcaca aaaaaaataa tgaagaaact ctaattatca atcattttta
      181 ggtcaggaat acaacttctt gaagatggag cctggagagg tgaattccct tggggaacca
      241 tacgactttg acagcattat gcactatgcc aggaacacct tctcaaggtt ggagtctcag
      301 gttatacctt ttgactttta attctgtccc tctctgtgaa tgctagaaac tatgcttttt
      361 taagtattcc aaaattgcta aaaatgtccc ttgcaatata acgttcttac atcagtcaaa
      421 gcacaccttg tttattttaa gtcagaataa tttaatcgta tttttaaaca catttcattc
      481 ctgttcagtt taaaagtagc cttttgatct tgcttcagtt cttcagattt taagacaaga
      541 taatctgcaa acatcatttg atataatact ct
//
LOCUS       KCKM01002460            1184 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38651apa ultra-conserved element locus
            uce-2407, sequence.
ACCESSION   KCKM01002460
VERSION     KCKM01002460.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1184)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1184)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1184
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38651apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1184
                     /note="ultra-conserved element locus uce-2407"
BASE COUNT          320 a          241 c          261 g          362 t
ORIGIN      
        1 tgaaaatttt cagccatcac agtataattc agtttgagta tgatgtattt gagtcaattt
       61 atcaaagggt gttacagggt gtcggttctg cattttgctg ttaggtattt tatcttctgt
      121 aacagtgctt ttctatatca tagcagcagt ttatttctca ccagcaaaat gtccagttac
      181 aacttttatg ccagaaaaca tggtataata acaaataatt tattaatctc agtaattaag
      241 ccctagtgga actaatttcc ccaaacatat tagctgaaag catacataaa tctctgcccg
      301 ctgtgtcctg ggttcctcat cctgcagggt tttgtgcata catctttctg aatcgtgacc
      361 gtacaatcta atggaagtat tcgaatttgc aggcttcggg taagtaaatg ctggctgggt
      421 acatctttga catcctgtta ccttttggca actgtaaata tgtaggtggg gtttgaggtg
      481 cttgtttcct ctccttccct gttttttctt tctttctaga tgactccctg agcatgccca
      541 gtgtggtaag tgaacaagaa gcatacctta tgggtgccgt tgggaggagg cggttctcca
      601 gccatctctc cagcgtgtct gcacctcagg ctgaggtggg catgttaccc agccaaaggt
      661 aacaacatgg gcttttcacc tttcccatta tattcacgag agcagaaatg gcacaggtat
      721 attacatgta cattagagat gtgggatagt agaatcagtg ccagcatagt gacactaaat
      781 ttattcatcg tgaaatagca ctggaccaag gctgcagggt tggaaatgat tttccaggat
      841 gatctgtgtt gcgtaagggc cataagaaca agttgtcatc cacagaaccc ttcctcctaa
      901 acagtttcag aaaccctcag cactactgtt ttcctctgct actaccgtgg atagcaagaa
      961 gaagacacag aattctgggg ttgtgcatcg aaccagggga ccatacccaa tctgtgtagg
     1021 gagtggggca gaatcctggg aagctaggaa gggggcagaa gcatcctgtt tgatttactt
     1081 cattttcttc catgtagtct ttgtccttcc tagaaaaata actagcccat taaagaaagt
     1141 gaatgtcagg ttcaaagatg ggatttaata ctctttaaac tcag
//
LOCUS       KCKM01002461            1167 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38666apa ultra-conserved element locus
            uce-881, sequence.
ACCESSION   KCKM01002461
VERSION     KCKM01002461.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1167)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1167)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1167
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38666apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1167
                     /note="ultra-conserved element locus uce-881"
BASE COUNT          359 a          227 c          239 g          342 t
ORIGIN      
        1 ttactccttt tttggagcat tcaggagttt gaacactcca tttctcctct ttgcagcctg
       61 taaacttttg tgattgagta gcatagtcag tagcaacaca attcatctcc tctatactag
      121 aggggaagcc aacataaggg tctgaatttc tgttgaacaa gcagaattta aatggctcta
      181 cccagggtgc agacaaaaat agatacaaat acattcagca agagaaaaga tgggtttttt
      241 ctgtagcctc aatgctagct ttggaatatt tggggttacc cacacctaca gatctcatca
      301 caccaaaatt atcaaatatg aaattatttg actattttct atgtcaaaaa ggccaatgta
      361 tcaaaaacaa gtcacagaca attcttttcc tgtaaaggtt agagattctc aatgtacatt
      421 cagagccata cgcacaagtg caaataagtc aactaccaga gctatttaat caggagcgtt
      481 tgttgatttg agcagagccc ctatgctgtg aaatgaaaaa agaaaaccaa attttcttga
      541 gcaatcttgc tgttcctgct tcaggtgcta ggccatttca ctaaagcagc tcagacgaga
      601 atgtcattag ttcttaagcc ccaggtgaat ttgccactgt tccacatgat taagccagat
      661 aattgtgtgt tgatagcgaa tgtggttggt gaaatacaat ttctaggacc ttcctaaaca
      721 aacacaatgt agaagtgagt caaagtgctg tcatttcagt cctttgtcac aggctttgca
      781 cttgcagaca tctctggtgg agactggcga ataattctgt ggcgtgtcac tatgctctta
      841 aaggtgaccc ggctcagaaa gtgaatcata catcttttgg catgcagttt aggggaggag
      901 ggggaaaaag acctggttaa cgtgcctgtg aacaatgcag acttctaagg ttagcctgtt
      961 ttaaactatg catgctggag attgctttgc cttcaaataa ctttacaatt ccagacagta
     1021 gtttcagaag tgattaaaat gccacaagta atgtgcaatt atatatcctg agaagcgagt
     1081 cactgaaaac tttttaacag ctactttaaa atgggtttct ctatcagggc aaagcagatt
     1141 ccgtaagcag acttctggga ctgtatc
//
LOCUS       KCKM01002462            1067 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38682apa ultra-conserved element locus
            uce-2422, sequence.
ACCESSION   KCKM01002462
VERSION     KCKM01002462.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1067)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1067)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1067
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38682apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1067
                     /note="ultra-conserved element locus uce-2422"
BASE COUNT          288 a          258 c          245 g          276 t
ORIGIN      
        1 ttccaggagc acaacttctt ttgtgcatga aacagaaaat gtgaggtttc aggctgtgaa
       61 atcaaacctt atcattgggc aggatttgaa ccctgagcac cctgctgttc tcaaaactgg
      121 ctgcttggtg ttgtttcctc atttgcctct gaggagccct gtaactaagg gaaccatttt
      181 gttttgcaga ttgaggagag aatcaaatat ttgaaccctt agtaaacatg caaacacaac
      241 tggttgcctt tgatgatttg ttagtttgga cctgagccac gagacctggg gattgctgtc
      301 caagttccta gagctcgagg agcagcagat caaagtcaag atgagtgaag cttgttatca
      361 gttggagagg cagccagagg ggtttccagg tggaatcttc ttaaaatatc tcctgcccat
      421 ttggaatctg gcaatcttgg ctgaacctga gtcacctact taataaaaat tccatgttca
      481 gtccatagaa atgcttccag cacaattaga tcaatttcct ctaagtagca ataaatgtgt
      541 tttcctttaa aaggccaaca caagcacatt atcacagcct ataatcctca ttctctctat
      601 tagctcaaag tacatcctaa aggccaaggg tcacagctaa agactaatca gtctcattag
      661 cctgtctaat ttatcttaac tagggggaca caagcacact aaaactgtta gggagacttt
      721 ttgatcagga tatggaagtc attcatcagg gccccgcagc ttccagagac agcaaggagg
      781 gcaaccaccc ggagacaaag cccttctcca aggatgctcc gcaccaagat gcacccacgc
      841 aggcaggaca gagcagaaaa tcctcccgca ggttcccaat gtcctactgg gcaccatcgc
      901 ggcaggctgg ggaggggaga cttacggaaa agcatctcct ccttgttctc acccacgtgc
      961 cgcccaggat gtcctccttg ctcagggtct gctttggctg aaccagggat gggtttgagt
     1021 tcgtctggtt aaagtttaac ctttctccag ctgtgagggc cctgcca
//
LOCUS       KCKM01002463            1065 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38697apa ultra-conserved element locus
            uce-2668, sequence.
ACCESSION   KCKM01002463
VERSION     KCKM01002463.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1065)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1065)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1065
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38697apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1065
                     /note="ultra-conserved element locus uce-2668"
BASE COUNT          231 a          270 c          250 g          314 t
ORIGIN      
        1 ttcccttctg gaaaactgcc actggagagg gaatagagcc tgggcttttg agctgcagca
       61 cgtcagctca tcagtgggtc tgtagctgga aggatcctcc cgtcagaaag acgagagtaa
      121 cttttcctgc tctgcccatg tgctgaggtg ctctgaggag cagtgttccc gcaggtctag
      181 gctgtgccag cgatgatgct gagagccttt agcagccctg cctcttgctc tcggttctgc
      241 cctttttctt ccggtgcccc atccttcccc catctcctgg gtaggggttg gggggagcca
      301 gctccccgcc agtgcctccc ttcttccaga ctggccaagt ccttctccac cttcccctcc
      361 ctctgctccc cccaccctct gctccgcacg agcctgggct ctgtttgtgc ccacattagc
      421 atttctgctg actgcaagga ttggtttaat ttcatgggtg tcatttcctt caagaaatct
      481 ctctctgagc agcagcccga cgaatgcctg ataaaacata ttttcctacg gtaatgattt
      541 tatggaccca taagtcatga atttattatg atctcagccc ctgctgctga ttgctgtaaa
      601 atgcaaagta attaacagcg agcggtagca gctattccca cctggtagcg tgttcttggg
      661 tgcgctgatg ggtttgatta aagtaatggc taaagtgtac agcccggctg taaaatatta
      721 gcatgattaa tgcagtatcc taaataagaa acaaaactaa tgggcatggt ttagggaatt
      781 aaaaatatat atacattcct ctccctccct ctagctattg ttctggctca tttgtgcttt
      841 cttttctgtt aaataatgta tgggctgagg accagggggc aggcgagaga tgcatattgt
      901 agtttcataa catcttaagt gcttgtgtta attttccact cctctgttct ctttcttctc
      961 aacctgctgt ctcccatcgg atagggggag aaagataatc aggtttcctg aacttggccc
     1021 aaagtcagat gtgatttgat ctggattgca gacagccctg ggaag
//
LOCUS       KCKM01002464             796 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38712apa ultra-conserved element locus
            uce-5227, sequence.
ACCESSION   KCKM01002464
VERSION     KCKM01002464.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 796)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 796)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..796
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38712apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>796
                     /note="ultra-conserved element locus uce-5227"
BASE COUNT          290 a          132 c          117 g          257 t
ORIGIN      
        1 taaaaatgca gaaaatcaaa tatgaatagt tcaagcaatc actcatagtg tatttagaca
       61 gcctttcgtt atactgtgtt tgttatgtca aagtacaatt attagatttg aatgaagctg
      121 ttcaggacag agttctaaag ctactttatt atacagagta agacagaagc aatatttttt
      181 aattccaata cagagattta aaatatttta atacaggatt ttgtatttct gagacataaa
      241 taaaacaata actcagtaag gctcacacac aactacacaa gccattttac aagaaggata
      301 tacttttcct tcttttctat gaatgtataa agctctcctt caagctctta ctaaatctat
      361 tgatctgtga aacacagtgc actccaggga ggcaattcac ttgacattat atatcaaatg
      421 atgagatgaa taatgatcat accaattggt aattaaacgt cttacaaacc ttttaactgg
      481 ctgaacgtca gaaaggtcaa atgagatcaa acctggtgtt ttgttgcttt taattctttt
      541 cttatattaa cagcaaatag cagtatttaa cagtagctat aatatcacat ggcacaacca
      601 aataattaac caacatactt tttattccta tatcattaca cggtttgaat acacagagaa
      661 attgttcttt catcctacgg tcctattata atcttaattg ttaagatttc agagaagtag
      721 tcactcacca gtacagtgca actgactagc aatgttattg gattaaggga aatgaaaagc
      781 acatagagaa aatcta
//
LOCUS       KCKM01002465             736 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38726apa ultra-conserved element locus
            uce-6588, sequence.
ACCESSION   KCKM01002465
VERSION     KCKM01002465.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 736)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 736)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..736
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38726apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>736
                     /note="ultra-conserved element locus uce-6588"
BASE COUNT          243 a          101 c          153 g          239 t
ORIGIN      
        1 ataacccagg taaaaggaac aatttacagt gcaagaagga tgccaaatac tatgtacata
       61 attcttgctg tgagatattg actttttttg aactgagaca tcaaaacttg tgaggtgttt
      121 gcatgtggcc attacagtca ttggctagga aacattggac atttacaaat aaataattgc
      181 tattaaagga tctgtgtgtc tgtggactat gaatgacgct ggctttcagg agaaagattg
      241 attattgtat actgactttt tgtaatcttg tacaattgta acgcatcaca agtggggatg
      301 ggaaagagga atattctggt ttatttccta gactgttata aaaaaaaaaa ttgtgttagg
      361 aaggcgtaaa tgtaacaagt atcacgctgt atataaaggt atcaatgttt gtcctgtata
      421 agaattatta aattacaaca gcagtttcat ttaaacttct gggttatgtt tgagcctgaa
      481 attttaatga agtgcaatac tgagtgtgcc tcatatcttg cagctgtaaa cataatggaa
      541 tgtacatgtc aataaagcca ctgtacattt ttatacagtg aaagtctaat gaatgtgtaa
      601 gcctctcttt tcataaacgg ttttaaaagg agggggggct ggtatcttag acttacttcc
      661 ataagttctt ttaaaaagta ggaaacttga ttagctaaac tggtagttac aagacgtgaa
      721 aatgctgctc aagtct
//
LOCUS       KCKM01002466             946 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38742apa ultra-conserved element locus
            uce-7216, sequence.
ACCESSION   KCKM01002466
VERSION     KCKM01002466.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 946)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 946)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..946
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38742apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>946
                     /note="ultra-conserved element locus uce-7216"
BASE COUNT          310 a          182 c          197 g          257 t
ORIGIN      
        1 ataaaacaaa ttaaaaaaaa aaccaagcat atgttcagtt gctcaatcaa ccttttctca
       61 atccacactc ggtgatctcg gtgagtcatt acggcataat tacaatttga gtgtgatacg
      121 ctgcttgtag aaaagtatct atttttagcg gaagaaacac tacggtccct gaaaggagga
      181 gaaagaaaaa aaaaaggaag caagaaaatc tctaaccagc aaatcagtgc tattgttaac
      241 tgatgttacg agacaccctg tagatttaca atgcttgcat tcagccacat gaaaaccgca
      301 ctgaaaagaa tgcctaccag gggttaaatt catatgcctg cgctgcagcc tatttctgtc
      361 aacactcagc tcaggaaata aacatttatg ctttctgaaa tgaaagtgta tttttgaaga
      421 ctagccgtca gatatttttt gcccttcaca ctttcaaatg cttagccttt tttgtaagtt
      481 gactgcaaag tgcatcagtt tgctaggcaa aaagagaaaa aaaaaatctt gacaagtgcc
      541 catggcatca ttgtcaagca cacgagtgtc tagtagaaga tggcaggagg gttggcacaa
      601 aacatgcttc cttcaagctt cttacctcag gggtacctga ctcttgagaa gcctttcaat
      661 ccttccaaat gacgttattg caaactgtca tctggtttat ttggagtgtg ctgtatcgca
      721 gataaacatg ctatttaact gcaggtcaag gtacagagtc attctgctag caaatgcctg
      781 agatacatta aatggcgttg gcttggggag ggagatggag agagatcaaa gttgtcaccg
      841 atatggtgca tgctaaggga gaagaagata cacaacattg tatttttaaa agccattatg
      901 cagtgctacg tttaaaacat tgacctgcaa gactcttaag gacgca
//
LOCUS       KCKM01002467             663 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38758apa ultra-conserved element locus
            uce-6898, sequence.
ACCESSION   KCKM01002467
VERSION     KCKM01002467.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 663)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 663)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..663
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38758apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>663
                     /note="ultra-conserved element locus uce-6898"
BASE COUNT          205 a          132 c          107 g          219 t
ORIGIN      
        1 tcaatattaa agatttggtt catttatata tttcctgttc caaacagtac ataacaggtc
       61 agttgacagg aatttgttcc tgacccaaac caaaacctag gcagttttta aataggctct
      121 tccttcatca ggagacgtaa aaaacataag tgtgacttac ctctgcatac accttctaat
      181 tctgttcact ctccctgtat cgttttgcac attcctgcat cttgcagtat tacacactgt
      241 gaagacctag taagcgagtt aaagtcagat gacgctaacg aatcccagcg caaatgactg
      301 aatcaatagg aaaccagcca ctgctgttta agtgtatcga taaatgtacc tttattttct
      361 cttgaatgga taagtgtcgc agttaagagt cctatggatc tcttaattga aagttaattt
      421 taaatcaata aagagagtca tttaaatatt gatcagtcct ttctacacga attgttagct
      481 gatttttttt tgaaacaact ttgtttaaat gcaatcaata gcccacaatc agtgcgttcc
      541 ataaaaaatt gacagatgtt cccaaaatgc ctgctaggca taatcttatc tgtttacata
      601 tgtggcatag atattccagt ccttttcaaa tgtacctagg tatctgcaga aatgtgcttt
      661 cct
//
LOCUS       KCKM01002468             962 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38774apa ultra-conserved element locus
            uce-3235, sequence.
ACCESSION   KCKM01002468
VERSION     KCKM01002468.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 962)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 962)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..962
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38774apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>962
                     /note="ultra-conserved element locus uce-3235"
BASE COUNT          348 a          164 c          149 g          301 t
ORIGIN      
        1 aattcagaca aaatttaaac tggaaaagga cgaaacaaaa aacgaaaaat ctaaacacct
       61 tcaagctaca gtgactgcag acatcaattc attctgcaca gggcttacat gcccagagta
      121 tgtgtcttcc aaacctcttg attttatttt atcttcaata ttaactctaa tcattcctac
      181 aaatgtaaat aaaaatataa tgaaaaatca gttgcacatg ctttattaag taacctatga
      241 cttaaaccag gatctgatga aaactttaca ctacactgga ttatactagt tgtaaacaat
      301 gctactgttt ttattatggc ttgatgcaga catgcttcag tatcttacag actctcaatt
      361 ttaaaatgta aatggtacag gatattgata aaccaattag cactgatgca aagcaaattc
      421 ctcttttatc tcaattacaa catgacaact taataggtca agatagtcta acatctgaga
      481 caagggcaat tcaataaaac aactgcatct tgatatggta attaagagga aatgtgaatc
      541 cattacattg cctcgtgtat gtgtgcatat gtaggcgtta ttttttattt atttaagcat
      601 ttgatgccct cttgctgttt ttatagtgta tcaaatccac atgaacacat ggtctaaagc
      661 tcaggtgata agtatctaca atatctgtcg tttagccagc caattttaag gatgcaactg
      721 tgcagataaa taattcatga agagccctta aaagatacac aattgctaga taatctcttc
      781 gaaaatagga cttctctgtc tataaatctg caaatgattt agatctggac aaaataattt
      841 atgaaagatt ctgataccga actgttagtt gctattggaa aacaaaaact cgaagactac
      901 agcaaaataa atgggttaca attggaaagg gaaaataatt ttgttttaat atgctgccac
      961 tt
//
LOCUS       KCKM01002469             927 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38790apa ultra-conserved element locus
            uce-2260, sequence.
ACCESSION   KCKM01002469
VERSION     KCKM01002469.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 927)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 927)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..927
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38790apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>927
                     /note="ultra-conserved element locus uce-2260"
BASE COUNT          285 a          148 c          176 g          318 t
ORIGIN      
        1 acgttacccc atctgcagta catttcagtg tattcaaaca tagtgaaatg tattgcccaa
       61 actacaactt gggactgtaa cagaagagaa taaaagagag gaagaatcca ttttaactta
      121 tttaattatc aactggagga aaaaaataca gttttggaga ataatcactt gtttttatgt
      181 ttgcctcaaa cctgagctac ttaccaggta taggatccat gttgttaatt ttgtttaaaa
      241 tacgaagtgt aatggtgcgt accttaaaac ttaggtaggt ttttggatat cactggatga
      301 tctgccctaa gtttgtcgtt cttaatccat taaaagacag gactgcttgt aaatccgcag
      361 gtacagataa ggagtcactg tttgactgtg tctgaaccct tttcaaatga aaaatgtcag
      421 tggcagaaag ggaggctgaa ttatttttta aaagggtttt caaagattct catgattcct
      481 ctggtatcag ttaaatgtga catgtccata gacatggctg gtttttagtg tgtaaaagca
      541 agcagatgct gcagttttca tctctgtgta gagagaaaaa tgctgcagta tgcctaagcg
      601 atcaacgtgt taccttgcaa tatcagaaat atttctctct tccataatta acatataaag
      661 agtttttttt taggttaaca caatttgcaa caatgtgact gagaggaaaa aaacgcgtat
      721 gggttttttt ttgtttggtt gttttattgt ttttttttct gattgtatgc atatatatca
      781 cgtataaatt aggtataatt aatccgtaag ctttcttgct cacatactgc cttttaaaat
      841 gtcatagcac tgtcatgatg aggactcacc cacatacata gaagcttttg taaactgata
      901 cagctctatt tcctagattt gttccag
//
LOCUS       KCKM01002470             501 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38804apa ultra-conserved element locus
            uce-7212, sequence.
ACCESSION   KCKM01002470
VERSION     KCKM01002470.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 501)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 501)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38804apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>501
                     /note="ultra-conserved element locus uce-7212"
BASE COUNT          185 a           64 c           76 g          176 t
ORIGIN      
        1 aagctttcac aaggtttatt aattttaaac tatatataca tttcataaac atttaaatga
       61 atgtctgtgt ctaatctcaa gtgcatttga ttaaaaaata ggacaatttt gatgttccat
      121 gttcaattat taagcaaaaa tattcagtta tcagatagtt aattaagtgg aactgactgt
      181 attcattaaa atatttgttc caaacaaatg tatttaacat tcagatatta tgcagaatag
      241 gtgacaattg catatctcca tggagatcaa taatgggatt cagatcattg tgtaaagagt
      301 ctgcaagttt aatgcagaga gaatgtcatt attatttctc tcttaatgat ggtcattatg
      361 cgcaaacact gattgaattc catttgttac ctgcatttga gctgagagga ataattacaa
      421 tttaagtgtc tccattaaaa ttcataaaag aatatgaatg caaaaattat acttgaaact
      481 gacaaaatat actttgagga t
//
LOCUS       KCKM01002471             685 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38819apa ultra-conserved element locus
            uce-7725, sequence.
ACCESSION   KCKM01002471
VERSION     KCKM01002471.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 685)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 685)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38819apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>685
                     /note="ultra-conserved element locus uce-7725"
BASE COUNT          200 a          163 c          136 g          186 t
ORIGIN      
        1 ccgccggtag gagccgtcct ggctccgggg ggaacatcga aatttaacaa aaaaaaccat
       61 aaactaccaa agtgggggtg gaggggaagc gagggctccg ctctatcttt ctagtgtcct
      121 tcatagattg ttttcttctc ttaaaactga catgtctaat tggcaagcgg tgccatatcg
      181 tgtccagagg tctcctgtgg aacatttcta cagctgtctc cttcaactag acgcttattc
      241 atgtcgcctt aatgagaaac aaaacgatct ctaatgagca attacatagc gacagaattg
      301 ttcccataac aaattcttgc gtgtgacaga aacatccttt gtaccagata ttccgcacac
      361 tgttgccgat tttttttcct tgcagggtga aaacaaaaag caggttgttg tatatagaca
      421 cctcttctaa aggaatgacc acagccaggg agagagctga gcctcaacag agcccgtatt
      481 caaaaagaag ccattaacca tcttaagtat gtaacgtaac atcccattat ccttcatatt
      541 atccccttgt cattcctaca acaaatacct attaatcttc aggataaaca gtttcctata
      601 tttacaaagt tgtttcgggt ccattgagga ggaactataa tcagccccac ggagatagtt
      661 accgatctcc ccggctctgg agacc
//
LOCUS       KCKM01002472             739 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38835apa ultra-conserved element locus
            uce-5905, sequence.
ACCESSION   KCKM01002472
VERSION     KCKM01002472.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 739)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 739)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..739
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38835apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>739
                     /note="ultra-conserved element locus uce-5905"
BASE COUNT          202 a          166 c          165 g          206 t
ORIGIN      
        1 aggaacctct cggggctgtg acagtgttac ctataggaca aggtgcagca tctctcctgg
       61 aaacaagggc gagggcagca gcgtggtccg acctcgggca atctcccggt gtgatgtgag
      121 atctgctgtg tccagaactt tactcccctg cccattacag gagccgaggg gcatcttgcg
      181 tggacagaga ggaaaagaat tagcccgtgg gaagcggatg ggtacagtat gtaaataaaa
      241 gtgactcgca tcctcattat gtgggctcct ttgaataaat gttagccttt aagtgccagc
      301 tgtcactcta tgcatggcct cccttcttac aactaacctc tccgtcacct cgccttgtct
      361 ccctaacttg tcctattatg cagtaccaag ctgagtcatt gtttcaagca ggaggtgaca
      421 tgttaatagc ttaataatag tataatctca caaataataa tatgctgtca cactgtctga
      481 agcacaatgt ttacaggaga agtggtaatg tatgatgaca gtaatttgaa taaaaatgaa
      541 tttactgctc ttgtctcatt tgcagtaaat tttcgcatct ttcatgcaca actggtgctc
      601 catgacctct ttcattattg tgttctcagt ggctgctgct tgctttaaag tgaaaggcag
      661 gcaaatgaaa cagaaacctg cagcttaata accgatttcc agaaaagagt tcacaccgaa
      721 aatctcactt ctttacgga
//
LOCUS       KCKM01002473            1044 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38849apa ultra-conserved element locus
            uce-6184, sequence.
ACCESSION   KCKM01002473
VERSION     KCKM01002473.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1044)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1044)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1044
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38849apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1044
                     /note="ultra-conserved element locus uce-6184"
BASE COUNT          291 a          208 c          230 g          315 t
ORIGIN      
        1 tggtttctgc attgtggcag cagtctgctt gtgtgaagta aactgaggga caggatccca
       61 agtttcctaa ttgtttcctg actgcacaga gcagggagcc tttaaaagag ttgggattaa
      121 atctgcatct gagtaaaaca aacaggaccc atttattgta cgctgaaaga ggcagactgg
      181 ctatagtttc tggctttcgc attattgtca ccatgctacg aacaccatgg ctgcttcctt
      241 catgctgaca attgaaaact ccaatattcc ataccttaaa aatctagtgt tatagtttgt
      301 tgcatggttt tccactcatc catgttgctc ctcagtaact tagcaatgac cagtcaagat
      361 atgcacacac catattgttt tacgtgtttg actagaacac tgacagatta ataggaaggg
      421 taaatagcta cacactctgt ggtggctcag tgtgggctgg caggattgac tgctgccaga
      481 ctttgttgta tttgcacaga ggaagccgca gcaaaagcct gctggggcaa ggtgacgtgg
      541 gtcatgggta tttgtttctc atctctatag aaaacaattg tcctctcaat ggaagacagc
      601 tttgggaagc tatgtggttc cactagtggg gaagcatttg tacttccaca gcactaaata
      661 aaatgcggct atagagtggc agatgcgtta agtgtccgca atacaccgtg tatcacacat
      721 gagagtttgg gttcatatat gttattttta tctatttctt tgactcgctc tgtttagaag
      781 aataggagta ttgctcagat tttcatcgat attttcctgg caattgcttc tgtgctgaat
      841 actcttctat gacatcaatt taagaagagc acaagaggct gcgtttgtcc acgagataac
      901 tactttggtt attacaaaag atcattattt tagcaattgc tggtcatcag ccaggaagct
      961 cctgtgagac cacaccttta cagaattaga taccataaaa acccatgatg acagtgtcta
     1021 cagtagacta ggcagactct taaa
//
LOCUS       KCKM01002474             318 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38865apa ultra-conserved element locus
            uce-6052, sequence.
ACCESSION   KCKM01002474
VERSION     KCKM01002474.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 318)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 318)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38865apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>318
                     /note="ultra-conserved element locus uce-6052"
BASE COUNT          109 a           37 c           70 g          102 t
ORIGIN      
        1 aaacgacatc cgtaaaaatg agttaagagt atgattgact ttgaaatcac tttagtcttc
       61 tagtttttaa agaggtttat tctgattaac tgacctgaat gttaagagaa ctggaatttt
      121 aatttgtatt cagactgtaa gaatatcatc cactcaaatg agacagtgtt gtttaattag
      181 gtctagtagt taactcagaa gaaagtaaat gtactgctag aggtttggaa gacggctaca
      241 ggctcctggg atttgcagga gtttggagaa gcttaaaaat aagaagtcag tagttttagg
      301 aattagaaat gagtactt
//
LOCUS       KCKM01002475             915 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38880apa ultra-conserved element locus
            uce-2319, sequence.
ACCESSION   KCKM01002475
VERSION     KCKM01002475.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 915)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 915)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..915
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38880apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>915
                     /note="ultra-conserved element locus uce-2319"
BASE COUNT          245 a          231 c          168 g          271 t
ORIGIN      
        1 aaagagttca tccatttcaa ggcttgccaa acaagcctac caccttgtgt aactgagcac
       61 ttcttactct gactccctgt aggttgtgta cactcagctt ttcactttca agtgtttccc
      121 tcaccagcct ccgccaagtc ccctccatcc tatcccccca actttcaagc ccgaggaact
      181 cctgtgggag agagcagcac atttcccttt gttgtgggtt tctccctaca ggctctgcca
      241 gcttagcaga tggtagtaca ccagaccttt ttcttttttc ttcctttttt ttttcttttg
      301 gcctctgatg ctaagcatga tttacaggcc tgagttatta tttatcatta ttcattttct
      361 gtcaccagtg cattgaaggt taatagaaat gccagcatgc tcactgattt acttagtaaa
      421 atatttgttc caaggtttag gtcagatgat tggtgtctga gcgagcttca ggtttatgca
      481 ttatgaaaag caagctgact tgaccttgag ccactagcac gagcgctata tattacttta
      541 gtggagtgac cttcagagac ccaagacaca ctagatgtat tcaacacatg ttttcttctc
      601 ccacactgct gacattgtat acattccagc tgaacttatg taacgtaaga tgatactcac
      661 ttttcatata atgaatttga gtaggatgac acattcagct acaaaacccc ccaacacaga
      721 ggaaacaaac taccttggaa tcccagatgg actgaagctc agcaagtact tcaggctaat
      781 tgacacactt tgtcacacag agtgtccagt tcaccaaccc ccgcgggaga cagagggcct
      841 aattcctaca ttcgccaccc tggtacgagt caggagtaac tccaatgatg tccactgaat
      901 taagtaagca aaata
//
LOCUS       KCKM01002476             811 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38894apa ultra-conserved element locus
            uce-4360, sequence.
ACCESSION   KCKM01002476
VERSION     KCKM01002476.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 811)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 811)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..811
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38894apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>811
                     /note="ultra-conserved element locus uce-4360"
BASE COUNT          199 a          182 c          177 g          253 t
ORIGIN      
        1 gtcactgttt acccaaggtg tgcttccttc tcctgcaagg agatattcct gcaaggctgc
       61 cgagggctgg agccgtgcct gcgcttttcc ctgcgcccct gcctcccttt catctgctct
      121 cgtgatgaat tgtagggaaa aactacccga gcccgtctgt tttggcttag atcagctttt
      181 cttctcatta taatttaagt ctttaagggt cttcagcagg agcctgtaaa agtcagatca
      241 ttcatccccg ttgacgccat gtgtttcatg gccgctcggg ccgtgattca tgcggcggtg
      301 ccgggacgcg tctcctttgt gccgcggcag aacaatgcct ttgtgcgccg ggccgggcgc
      361 cgcagggtta actggggaaa tcttgtaata gccgaaaact atggattgag caaaatctcc
      421 ctgtcagctc tctgtgattt tgctgagagc acttggacat gctggcattg gatttacaaa
      481 ttgaaaatca ttaataattc taaccaggct gtgataaatc tgagatcagt ctcgatgaac
      541 ctggacacca tttcataaat caaaaagatt acttaggaat tttttaaaat ctgacgtcaa
      601 aatgtcatgg ttactaatgg tttttgtaga tctcttacag tgatatatca tttatctacg
      661 ctacatctaa aatgtgacac cagggcagaa atgtgatgtc tttaatatca tgaatacatt
      721 ttatcccata ataaaggtat taacaacttc ttgctgtgac ttgtacttga agttctgtgc
      781 ctgatttagt gctattgtta ccacattaac t
//
LOCUS       KCKM01002477             530 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38910apa ultra-conserved element locus
            uce-4744, sequence.
ACCESSION   KCKM01002477
VERSION     KCKM01002477.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 530)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 530)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38910apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>530
                     /note="ultra-conserved element locus uce-4744"
BASE COUNT          161 a          110 c          105 g          154 t
ORIGIN      
        1 aatctccgta gtcattctcc ttgataaaca aacaagggaa aagatgcaat gaggtgtaag
       61 aatagatttg cacagggcag acaactgaac atttaattta tttacctctc ctaacagata
      121 cctggggtga catttattaa taaacggcat tatcaggtgt ctgatatgta gctcacagaa
      181 attaattacc cagcccatgg taaaactata acaagcctgc agtgctgtaa catttgtgct
      241 aattgaaaat gagataagtg ctgtgggtgc aatttgcatt caatgcagtg tattaattat
      301 cttcagttct cttcatgata aatatacctg actgaaccac tctgctaatt tactgggtaa
      361 tagagtcata agtggattcc cttaggtgac caactacagg catcgagctc tttgcaacat
      421 caaggccttc ctctttccca agcacttaaa tgggttagca aacgtggcac cttttcttgc
      481 aggctgtgtt ggaagtacac ggcaacaaac tccttttgtg accgcacggc
//
LOCUS       KCKM01002478             368 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38925apa ultra-conserved element locus
            uce-4729, sequence.
ACCESSION   KCKM01002478
VERSION     KCKM01002478.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 368)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 368)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38925apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>368
                     /note="ultra-conserved element locus uce-4729"
BASE COUNT          147 a           59 c           55 g          107 t
ORIGIN      
        1 aaaaaagaga acaatcatca gtaaagagaa aaaaactcag attttacact gaatactttt
       61 cactgcttat cttacaaaat tattattagt tgctttctta gttactccta ttcatcagga
      121 tgatgtgtgc agattgtgag aatgccaaat cttctctgaa aactgatgag taagcaaaaa
      181 aagagctgct ctttaaaccc ttcacagttt atagccacat ttacataaca ttaaataagt
      241 caacaaaggc atcattagct cccattaaaa tatgagcgaa gaaatttaaa cgaacaagac
      301 aagctaattg gtaagtaatg ttgtgtatca aaaattatga ctataagatt ccaaagttaa
      361 tgagaagc
//
LOCUS       KCKM01002479             849 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38941apa ultra-conserved element locus
            uce-5972, sequence.
ACCESSION   KCKM01002479
VERSION     KCKM01002479.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 849)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 849)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..849
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38941apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>849
                     /note="ultra-conserved element locus uce-5972"
BASE COUNT          321 a          154 c          145 g          229 t
ORIGIN      
        1 tccaattcaa atagtgaatt ttaacgttga ggaaaaactt acaaattctc tacttcagat
       61 atttttgccg cataatactt tacataaaca caagaaatcc caaactatca taacaaattc
      121 tcccattatg aaagactata agcgtttgaa aaccacatta tatgacaccc cataaagctg
      181 tttttcaatt gtgcaattac ctattcagca gttaaataaa agtgaaatat tgacttaaaa
      241 caatgttaat ggtcaaagaa tcattaagaa atccttcatc ataactttca cagcaggtgg
      301 cctgtaaaat gatcaagaat aatgtgctgg attctgtagc caccaaggtc agtttctgca
      361 tacaaatctt tgcaggggga gccttcagaa agtgggccat tcatctgaac caagttcaga
      421 gaattttcag cactgtgaaa agatatgtta tgcaagcaca tagatgtatt cagtgggggt
      481 agactgaacc agctacatgg agactacaaa ggagccctcc catggctcat gaataagtcg
      541 aggaaatgat cagggagaga tgtttagaca gatggcccac ttaaaatgcc tgggacaggg
      601 cataagcaat tttaatgaaa ctttagatct accatataaa ttgtttctta ttttctctgc
      661 cctaaaaaaa ctcaagaaag gcaaatagaa atttaacaag tcaaacaaga gcttatctca
      721 tgatgcaaaa aaaagggaaa aagggaagta aatctcacac ttttaagcat tattggttta
      781 ataagttcac atacaaagaa atatccttca cagaaccttc aactatcaca tgaatataaa
      841 agcagggaa
//
LOCUS       KCKM01002480             651 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38957apa ultra-conserved element locus
            uce-2152, sequence.
ACCESSION   KCKM01002480
VERSION     KCKM01002480.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 651)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 651)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38957apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>651
                     /note="ultra-conserved element locus uce-2152"
BASE COUNT          186 a          126 c          144 g          195 t
ORIGIN      
        1 tggatccatt ctattcctgt gcccaaccaa ggggccatca gctggatttt ataggtgaag
       61 cccttaaaac tcagtggttt taatccttac taaaaatctc aggcatttcc cagattggtg
      121 taagctttag gtttcttttc aagcaacgac tcgggtttga gaaatggtca ttcataaaag
      181 gggaagcctt ctgaacgatg ccccgtttta ggagagcgag actccgagca ataaggcaca
      241 ggaccaaagc tggttttcgt aggtgcaagc agttgaaatt cctacaatta acaagtgcag
      301 tgaaggggtt aaaaagctat tggttagttt gagaaatgtt cttttttagt tttttcctgg
      361 cctagtctag agcaaccacg tgacatactg aatgcctgcc agcctctttc ttgttgatcc
      421 tccggagacc atctgtgctg ggggcattga ttagagtgtg tctgctggga ttacatcttt
      481 tctgttgcca tgccaactaa tcagctgatt ttggttacca cagaaacaaa atgtcagagc
      541 tcacagtacg gtaacatgaa ttcagcacaa cagaaaatgt tttcttaatt ggagaccctt
      601 ttgatttttt ggattctatg taaaaggcag ctttaaaaaa aaaaaaaaag a
//
LOCUS       KCKM01002481             743 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38972apa ultra-conserved element locus
            uce-1236, sequence.
ACCESSION   KCKM01002481
VERSION     KCKM01002481.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 743)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 743)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..743
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38972apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>743
                     /note="ultra-conserved element locus uce-1236"
BASE COUNT          246 a          123 c          149 g          225 t
ORIGIN      
        1 gaagggaagg ggagagggag ggaaagaaaa aagtcaacaa aaatcatcct tataaaataa
       61 gccgtattac ctccagaatt gccccccaag taataaagga aggtggatcg aaaggtccca
      121 gattgagtga cagtcatatt tctggaacta actggttttt aaaagaaaag gttaggacgg
      181 ctggagaatg ctaagtaacg gcgcgagaga gagatggctg agctctgaaa ttgcttacag
      241 aattacattt gtttttcttg tgattttatt aaaagtcact cctcatctcc agaatgcgtg
      301 aaaatatcta ctttccactc agatacacca cattaacttg ttggaggcga atttgtttgt
      361 ttgtctattt tatttatttg ccagataaga ttgatgcagt cttattagcg ctatatctag
      421 ttataggaag agataaggat gagatgtttt ctttttattc caattactag acttgtcacc
      481 taactgaata actgatacat gattatttat cttgagtaaa tagaaatcag aaaagcagcc
      541 aacttaacac atacaaacaa aatatgtatg ttccttatta ctatatacca cctatgtaat
      601 cgaggagatt aaaaccacgg ccttaaaagg gagaaagtta aataccccat ccacgtcagt
      661 ctctgatgtc tattatttca ttgctatgcc tggcggtttg tttatccatc cgagtgggga
      721 gatttcagat ttaaaaatat gtg
//
LOCUS       KCKM01002482             804 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 38988apa ultra-conserved element locus
            uce-2740, sequence.
ACCESSION   KCKM01002482
VERSION     KCKM01002482.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 804)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 804)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..804
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38988apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>804
                     /note="ultra-conserved element locus uce-2740"
BASE COUNT          203 a          205 c          179 g          217 t
ORIGIN      
        1 gaagagttta tttttaattg tcttttaact gcagacatta acataaagga cagggctctg
       61 gggctatctt ttggtggtag tggtgtgacc gtaaatgatt cccttaatgt agtttttgat
      121 atagagccca aattagctct aataaaaagg gataataaag gcagctcttc gacaaaaata
      181 aactcctcct agctgtcaag cctgagccat tatcaagagg aagcagcact ctcatttcaa
      241 ttaaccttgt ttgcacccca ctacgtccac gcaaataaca ataacattaa ttcaaggcac
      301 tggtgcggtg cgtccgcatt tttgactatg tacacgcttt ggagccagcg gctaatgaac
      361 ccgaaactca acgtgaatat ccaaattgct cacaacagag ttttgaagct ctattaggga
      421 gaaaaatgct gattcttttc gagttcctca aggggaaaag ctgttgtagc agcagcgggc
      481 ggttgcccga ctcctagcct ctcgctaacc ttcgctcaca aacccattca ttcagattta
      541 gcggttcctc tccatcgccg gggttgcgcc ggtggctctg ccccgtcacg gacgacggat
      601 gctccttggc tgagggatct gccctgcatg tcctgtggcg caatattccc caaccgacag
      661 ctttccctct cctccaggct cttttttcca ttgccagagg gacagtttgg tttcagaaaa
      721 gcatctgcaa agcatcgtgc ccacctggag ctgctctcaa cgcctggaga tcatcctctt
      781 gctcaggatt ggggaaaagc ttca
//
LOCUS       KCKM01002483             716 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39004apa ultra-conserved element locus
            uce-4866, sequence.
ACCESSION   KCKM01002483
VERSION     KCKM01002483.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 716)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 716)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39004apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>716
                     /note="ultra-conserved element locus uce-4866"
BASE COUNT          215 a          147 c          171 g          183 t
ORIGIN      
        1 tttttttttt ttttttaaca tgcaagttgc catgaaaaat ttgttaatga aatatttgct
       61 tagaagtctg ctctgggcta ggctgataac ctatctgtgt ttgagtttgg cttcccatat
      121 tctaaatact catcttctct ctgtttagct tattgattgg tttggcagga aaagcagcct
      181 tgtcatcagt gaccaaggtc aaaccaaaca aaaagggaca gtaggagaaa ataaataaaa
      241 aaaaagaaaa agaaagaagt tggatggatg cgctcagcga gacaacagtg gaatacctga
      301 cctcctgcaa ctttccttag ggagacaggt cctggtctgc ccaggggcct gccagctttc
      361 gcaaggtcac aagaaattcc tggcgtcatc acagccagta tttgtgcatc gcaggagagt
      421 ctagagctgg gagtcaggca caaccagcag agggaaaagg tggacatggc cataccaagg
      481 ctgggtccaa atgcccacag gaatatgccc caagagcaaa tggggcgctg agtcaaatac
      541 ctcaaacatc taaaattaga agcttaaagc ccatgtctac acatgcaagc aaaagtcacc
      601 tgttccttga ggtgcctgaa gctctgtttc agagaggatg gcagctgctc agaaaagcgg
      661 gagttaatgg taaggttttt cccttcaaca tgacttggta tgggcttaca gttcta
//
LOCUS       KCKM01002484             985 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39018apa ultra-conserved element locus
            uce-5615, sequence.
ACCESSION   KCKM01002484
VERSION     KCKM01002484.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 985)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 985)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..985
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39018apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>985
                     /note="ultra-conserved element locus uce-5615"
BASE COUNT          310 a          184 c          213 g          278 t
ORIGIN      
        1 ctccaggcaa acagcatatc actttcctta aaatgccatt gggaaactga gataaatggt
       61 gaagcatttt ctgtgttgac atgatgttcg cctgtccgat tgcatccttc ccaacagaca
      121 gcagagaagc aattacaaaa aaagacatct gtgccaaggt ttggctggcc agggagggca
      181 agctcttgtg tttaagaggt agagaatcca atcgatgaaa atgtctgggc ctgttagcac
      241 caataaagct gaaggccact gggaagctca gagagggtct tttgtttcgg agacagaaaa
      301 gaggccgaag ctgtgacact tggggaggaa tagggtcagc tagtaccatc atccatcttc
      361 ctcaatggca gctttctgtc agtttttaac cctgctcagc agaggatcta aacctctatt
      421 gttggcacca gccaattctc agccaagtgt aaatgaagtt aatattcact gaccttatgc
      481 atagccaatg aaggcccttg atgtcatcct ggaaataatg ttatctgaca cttcaaaaag
      541 cagatgttga caggttgttt gtggtttttt gctgagccag tatgcaaaga cacattgttt
      601 agccacctcg catttaaact gatttccata ataaccacaa ataggccttt ttgaccttaa
      661 attgacatag ttatggtttt agtttgcata tcattatatg ctgctcacaa agcctggcta
      721 acctgcgcta aatgatctgg gagagggaac ttggttcagt tagatgagaa atatatgggt
      781 cagtgagcaa attttattta tgccgataaa acaatgggta attaaaatag tttgaatagt
      841 tcaaaccaga cacttctaga acaaaatgaa gaatagcatt taatgtacaa catacctgca
      901 tgaaagaaaa tatatcacag aagtgaaaaa tttcatgggt atggttttta ttttgagaga
      961 cctattacaa gcactagtta aggtc
//
LOCUS       KCKM01002485             546 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39034apa ultra-conserved element locus
            uce-546, sequence.
ACCESSION   KCKM01002485
VERSION     KCKM01002485.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 546)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 546)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39034apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>546
                     /note="ultra-conserved element locus uce-546"
BASE COUNT          176 a           90 c           98 g          182 t
ORIGIN      
        1 tgtttgtcaa tgtgctgtat aattattaat ttgttcattg aggcaactat ataaataaat
       61 agaaagcaga atgccacgat taaactaaca ctagaaatcc agggtcaagg agccctgtta
      121 tacagggatc taaatagctt tcccaggtcc tatttttaca tctccataca gatctgcagg
      181 tctgtaactg cgaattaatt ggcacacatt tagatgccaa cagagctttt gtattctcag
      241 tgcacatttt gtcttctcag agtgagatgt tagtaatgga ggttttaata ttacccctag
      301 gggagcacca gaaaatctta acaatttcct tcactagagt attttcatta gagctaaatg
      361 ctgtgcaatt tacatttgaa atcaggtgag ggtaagtata atgtgacaag acatgttgca
      421 atgttaggtt tttttgttca aatgttcctt atgtactgca atataccctc aaaagataag
      481 catgcaatta aaataaatat cttgattttt aaccactcct aattgaactg ttattgagat
      541 aatagg
//
LOCUS       KCKM01002486             221 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39048apa ultra-conserved element locus
            uce-5321, sequence.
ACCESSION   KCKM01002486
VERSION     KCKM01002486.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 221)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 221)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39048apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>221
                     /note="ultra-conserved element locus uce-5321"
BASE COUNT           77 a           40 c           42 g           62 t
ORIGIN      
        1 attgcagctg gacagcaata gccagccttc acttatttat ttatttcttg cacagagggg
       61 aggaaaatat aggtccatga atcaatctag ataatgggga aggctgaatg taataaataa
      121 tacagtaaca accctaaact aatgagctgt tgctaaggta catttcacag gctcatcctc
      181 tatataaaaa gtcactaata atcccttggt gtaatcagat g
//
LOCUS       KCKM01002487             418 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39062apa ultra-conserved element locus
            uce-675, sequence.
ACCESSION   KCKM01002487
VERSION     KCKM01002487.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 418)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 418)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39062apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>418
                     /note="ultra-conserved element locus uce-675"
BASE COUNT          127 a           68 c           79 g          144 t
ORIGIN      
        1 aatggttttg atttagttca agtcaaccat ctcatttaaa attagcccag aggtcttgta
       61 aaaatgctag taatctaaac ataataatgc gcattgccca attgcttctg tatatgatat
      121 aggttcagtg ctgtaatgct ttgacagccc attactgaat gtaatgaaca gctattttta
      181 aacagaagaa attcaagttg acagcttggc aatgaaattc agctagtggc atgatttttg
      241 tcatcttcgg tatagagagt ggatttcagt ttagtttaaa gaaatttgta tcacagactt
      301 tatggagcaa gctttttttg cttcagttta caaaatactt tttgaagtgc ttgaactaaa
      361 gctgcgtttt gtcaaatctt gaagcctcca ctcctgtcag ggtacaagac aatctgtg
//
LOCUS       KCKM01002488             851 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39077apa ultra-conserved element locus
            uce-7787, sequence.
ACCESSION   KCKM01002488
VERSION     KCKM01002488.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 851)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 851)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..851
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39077apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>851
                     /note="ultra-conserved element locus uce-7787"
BASE COUNT          268 a          173 c          163 g          247 t
ORIGIN      
        1 aattcatcag gggtatcgag tatttattta tgggaatgct cacagtgcac tggcactttc
       61 caaagggtga aggaagcatc gtgccccctc tgaagagatc gcagtctaag gagcaggatg
      121 tgacactaac cacaatggag aaattactct gattcgagcc agagtgcctt gtttacccct
      181 tactattttt tgccctcact gttaatatga ccgtttcttt gttgttgtca atggaaagtg
      241 aaaaatgtag gcttaaaaac cctatcgcag cgcacaatcg gtgacgaggt tcattgagaa
      301 cagctataaa gccttaaaca agccctttat tttgtgtttt aagaagtgtc ataaggagtt
      361 aataggacac agctgtacag gctctttcta acaagcagct tctgtcactt tggtcaccac
      421 aggtgtctgt aacctgcaaa ctcttattac tagtgtatca aagttgtgct acttaataga
      481 tttctttagt aaaacacaac aaagcaatta catggctgtt gatcgtcagt cataaaaaaa
      541 cccctcaaac acagtttttc aaaagaaact acactgcaat ttttttgtca ttgtaaaata
      601 aaagaaactg gagaattaaa cagaaatgcg aacaatggca cggcaggtag tcaactgaac
      661 ttagccacta cagatggttt agaaatagtg tttccttcta caccaacttg tgggataaaa
      721 gcaaaggagg aggctcttta ctgcccatga atggcaacac caaaagactt aagcaacttt
      781 ccagtctatg catttggtcc catgaaagaa cctagatgtt tctttttcct ctctctcttt
      841 tcatttaaaa a
//
LOCUS       KCKM01002489             925 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39092apa ultra-conserved element locus
            uce-438, sequence.
ACCESSION   KCKM01002489
VERSION     KCKM01002489.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 925)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 925)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..925
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39092apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>925
                     /note="ultra-conserved element locus uce-438"
BASE COUNT          270 a          184 c          174 g          297 t
ORIGIN      
        1 cagacataat ctatacctac aagtcagacc aggtcctgat ctcatgttag agaatgtcat
       61 tccactgaag ttagtgatgc tgaacatact tgctctcaac ccgaatttcg ttcactttga
      121 tattgaggca tcttttcttc ttccctgtga aattcatatt gtcccttgta cagctgtttc
      181 ctttggagaa ctgggtgagt acacggcaaa tgcagtcaac aacaaatgtg ttcacatttc
      241 actacaaaga gcatatgaac tctttgtacc tgacacttta cacaatatgc tctctggctt
      301 taagaaaaca ttatttcatg ttcttactct aatcagcctt gtctgccagc tcagagaaca
      361 gagaggttca ttgttatatg cagctgtcat ttgttccatc tccttgctct ttctgacttc
      421 aatatctttg tggtatttag tgaaagtaat tttcagttag aaatcttctg ccctttcagt
      481 aagtgcaagt atagcacttc atcaatcgcc aaagaattcc aagctatctg ggatgtatca
      541 ggacagttga taaaacctca cagagcaacc tatgatagta catcccatca taaataaaaa
      601 aaaagcaaaa aagggccttt gtcagtgttt atctgtagcg cttttattct ttgcccttga
      661 tttcctcttc agaaaattga tgcaccctta aattgaagca ggaggcttga caggtgatgg
      721 ttagtgtgat aactgctcag atttcatcag ccagtgtttt tctggtggtg caattgtagg
      781 aactttcagc tagattacct gtcatccact acatcagata aaagagggag agttgaaaga
      841 tgcagttttg ccactgtacc ttataggaaa tgaaaagtgt gggtgaggta acagtagctg
      901 aaaagaagta caattatttt ctaat
//
LOCUS       KCKM01002490             960 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39108apa ultra-conserved element locus
            uce-6758, sequence.
ACCESSION   KCKM01002490
VERSION     KCKM01002490.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 960)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 960)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..960
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39108apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>960
                     /note="ultra-conserved element locus uce-6758"
BASE COUNT          253 a          221 c          198 g          288 t
ORIGIN      
        1 ctatgattaa gctgtaaacc cttgaaagta aggatttgtc atggaaatgc tgacacagcc
       61 ttcactgaag cagggtgaat ggcatggcat ggttctctgt accaacgcat cacagcctct
      121 gttggcacca gtctcggtat acacagccac gacaaaaggg aagccgggag cttgaatatt
      181 ctcccaaagc acttaaaagg ccagcatgaa tcgtgtgggc cttgcatgtt ttttgtttgt
      241 gtgcagctag cagactgtgc tgtgctattc attctaggtt aagctttcgg tgctgtctaa
      301 taagtggccc ttgtacaaaa acgtgatctg tgcttttcca gatatttgta tgtcaggcag
      361 ctacacagca gcaacttctg taatcccttc tcctgcagtt agagctacta gaaaggctta
      421 ataatatccc agaggcaaag atgaaacagt atctccacag ctactgtttg ctgtagagag
      481 cttttgaagt cgagcttaag atgtctttat ttccctacca gaaagaattt tttttgccct
      541 tctttctcca gtgttgtcat gatgatggct ttctgcttga aaaatattcc aagaggctgc
      601 agtgttccca taaagcatta gggaatgaga gcagcttttc atcaggggct cctggaatct
      661 gtaagtacag tttgtcacta cagaaaccca cagccaccct actagcaatc tcaatttaaa
      721 accccacgct tcttccttat caggtttata gcagcctcaa ccttctctgg cagcttactc
      781 ctgcccggct cttggctttt aacttccgtt tctaattaaa tctaagctga gttcatcata
      841 cacctcccat ttatagttct cttttctttg gtgtaagaaa gtgtcatatg ataaagctgc
      901 taaacctgca tataacctca ctgaatgatg gtccagctcg atcaatgaga ggggatagca
//
LOCUS       KCKM01002491             973 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39124apa ultra-conserved element locus
            uce-1497, sequence.
ACCESSION   KCKM01002491
VERSION     KCKM01002491.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 973)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 973)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..973
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39124apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>973
                     /note="ultra-conserved element locus uce-1497"
BASE COUNT          314 a          162 c          190 g          307 t
ORIGIN      
        1 aagtggtggt tttattgaaa gagagctttg tggtattttg cttttgaaat gtgattaaca
       61 cagagtttga ggattggcaa tttgtttaaa gaaacggata aaatatttaa aaccgccact
      121 ttatttaaac tattgtgcct ccttcagtaa acattcagta catgactgaa ccctgtatga
      181 acttgtgctt gttgctggtt aaatagattc tgagcttaaa tgaaaagggc tgctattgag
      241 aataggacaa aaaagttgca tgtgcatttt ttttttattt gcccacacac aagctcttac
      301 ctcccaaaat actgcgttca caggatcttt tattaaaaca cttttctttt ccctaggcct
      361 caaagtacta aactgaaagc aagctgttaa cagaaatgag taattattga agctctaaca
      421 ggcagctttc attgaagttg attacagcag ccatataatc acttttacgg atgctgtaat
      481 cacagtagca gggaatgctt gacttggttc ttattgtttt cacttagggt ggaagtaggg
      541 ggcctgcaag aaatgcattt taccacctca gtacaatttc tgctgtaaaa gaaatctaca
      601 caacactgag tgaagcagag aatcatttat tctttcttta ttagcatttt ctcctccctc
      661 acatgagagt ctgttggagt caagaaattg ctgttattca atatgcaagc cataggttgt
      721 aatgaccatt tgggagggta tgaccaacaa ttacggccct taatgaatag gagtaatcta
      781 gttgagacta aacactagta gcaactatgg tgctgtctct ggttaaatta aaagaatagc
      841 aatgcaaagg aagttaacaa gaattaatta gttagatcga actgaaaacc tactcattag
      901 tgatgttata ggcaaagtaa aagcctatct tcagtgcaat taggtagaca aatgaattgt
      961 acaactgact gat
//
LOCUS       KCKM01002492             959 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39140apa ultra-conserved element locus
            uce-4716, sequence.
ACCESSION   KCKM01002492
VERSION     KCKM01002492.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 959)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 959)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..959
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39140apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>959
                     /note="ultra-conserved element locus uce-4716"
BASE COUNT          298 a          163 c          203 g          295 t
ORIGIN      
        1 acgagagtgt gcttgcaaag cagctaagat ttttccttac tagagagcta tcctctgagg
       61 acacagaccc tctctcccac tatctcatcc ataggataga ctttgtgagt gctttagggg
      121 ccgcaggacg cttgtgggca atagttgccc ccagtgagtt gaaaagaaaa tggttatatc
      181 tatagcactt acaatgtcct acgtccatct aagcctttgc tcttttcctt agttctgtat
      241 ggtttgggat ttggaaagtc acagtcttga ttgtactgca cagtgagttt ttattagaag
      301 gtttaacaca tccttgctta ctaggccata tgacatttaa actggaaata acccacccaa
      361 gtcagcaaaa taacctaacg tcttttatat ggcggaacct ctaggctgaa gctataaagt
      421 attccaaaga tttatactat ggactcgcct atgctttctc ttacgattaa atgcagcatg
      481 tgaaaaagga tattgcgacc tggatggatg catcaagaag tatcaatgat tgttacctgc
      541 agaggtgtta caagaaattt catctgctgc aacgaagacg aattgatttc tgcaagagaa
      601 gataaaattc acaatactgc ttgctgactg ggaaatgtgc tagctgccaa ttgacttgat
      661 gtttacagat ggggtagggt aagggtgctt aatttcaatg aatgtagcaa gaaaaagtgt
      721 tgacgtattt cagcactata gagtttataa ggatcatgag gtagacatgc taggatcttt
      781 taaatgaaat aatggtgaca ttcggatatg gactatgtac aaactcttgc attggaagct
      841 tcatgtttag tgttacagat atgtcaatat atttatgaag tctaataaaa ataaaataat
      901 ctttatattg acagagatat taaagggcac tagtgcaaaa tatgtgaaaa gcgtttttt
//
LOCUS       KCKM01002493            1033 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39155apa ultra-conserved element locus
            uce-502, sequence.
ACCESSION   KCKM01002493
VERSION     KCKM01002493.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1033)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1033)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1033
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39155apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1033
                     /note="ultra-conserved element locus uce-502"
BASE COUNT          345 a          197 c          186 g          305 t
ORIGIN      
        1 ctgtattctg cagcattatt acattgcctt gaaaaagcac ttactaaatg taccctttcc
       61 aataagaaat gaaagcagct tcaacggtga aaaatcatgg aaaggctaaa aggcttacat
      121 ataatgacta cataaggtta tttattttgc aaaggcaaac atattcagag tacagatact
      181 ctatttttta gcttcaaagt aattgctata gaagcacaga ccttcattaa ttcaggacgt
      241 tgagaagagt ccagcagtct gcaaatgccg ctgtagtagc ttgtagggat aactatattc
      301 tgtaccaaga ggtggggaaa aaaattatat gagttttgaa acacaaccaa actgaaattt
      361 gtctaacaga aattatctca gacgtaattc aagtctccag ctcttgcatg tcattgagaa
      421 gtggtctggt tgtacttaaa agcagcaatt tcaaatctaa tagatacatg tcacgcagga
      481 caggcattat atagcaaaaa atgaaatggt accatcttct tcagctgatg gaagtattgt
      541 ctcaaacgct cctccttggc ctgtacctct gagtcactca tgctgtcaat caagtgataa
      601 agaaaatagc caacagcttc tgtggaaaaa aacaagagaa agcattccac taaaattacc
      661 gagactgtca tgttatcaag attaatttat aagaaatcat tttggtgtga gatgtcaccc
      721 tgatgagagg ctctgaaatg gcaacaatga tcactgaggc atagagatta tgtggtttgg
      781 gagcacatat ctaactggtg agtgaaagga atattaatta ttttcagacc tagtgacagc
      841 ttttcagtac agaatcttac ttcaatctat tttttccact actgtgtgac agaagtggta
      901 ctgcccaagg ccttcccccc ctttcctgcc cgctacccca aatagttgcc acaaatattt
      961 tgtcattgct caaaagaaaa aacagatttc taacactttg catatttatt ctgtacattt
     1021 tacccattat att
//
LOCUS       KCKM01002494             885 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39169apa ultra-conserved element locus
            uce-254, sequence.
ACCESSION   KCKM01002494
VERSION     KCKM01002494.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 885)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 885)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..885
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39169apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>885
                     /note="ultra-conserved element locus uce-254"
BASE COUNT          266 a          153 c          172 g          294 t
ORIGIN      
        1 agaggggttg aacctggaag cagcacagtt aatcacctct tctgcactga tatactacag
       61 gtaataggga gagggtggag ggaggaattt agagcagctt aaagtcattg agtgtgaaag
      121 actacctgag tctttctctg tagcaacatg aagtacctta ttcaggtaaa gaagggcttt
      181 atttactgca aatctcacaa agtttgtgct accccagata caaacttcgc actaacttgt
      241 tcactctggg gaaggttcac agtttgtttt tgtttttttc gtgttgggtt ttttgagcaa
      301 taatagtctt tctaagatgg ctgcagtgtc agcatttatc ttgaaactct tggatattag
      361 ttttgactgc agtcaccttt ctgacaagtg ttattgcgac tgtgttttat atccctgttc
      421 aggatgattt ctaatgataa tgctctgtct acctcactgc ttcacactaa attatagatg
      481 ccactatgac aggacaaact atatccaagt gctaaactct actccctttg tgtgatgtca
      541 gtgccttcac tactttgtgc ctggaattaa aaacaggata gaaagatatg caaaacattt
      601 ctgcttaaaa ataatgttct gtcagttatt aaacaagtga tatttcattt aatcagctca
      661 aggggattat tttaaatgaa aaggcagaga gtatgatttt attaacacat tcctgcccta
      721 gagtcctact gtaataattc ttacttgact aaattaaaaa gttataattc agtccatcca
      781 cagcaaagac ttatggatag ttaaatttca ttagtttttc tgttttgagt tgtgcaaaga
      841 ataaaaggaa ggcatcgtgt ctccagaaaa tatgtcctga agtaa
//
LOCUS       KCKM01002495             915 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39185apa ultra-conserved element locus
            uce-4585, sequence.
ACCESSION   KCKM01002495
VERSION     KCKM01002495.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 915)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 915)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..915
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39185apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>915
                     /note="ultra-conserved element locus uce-4585"
BASE COUNT          288 a          195 c          163 g          269 t
ORIGIN      
        1 gttgcagagc cattattatg catggaagtg cataataatc cagtccagtc gtgactctac
       61 cactgacttc ccacatgaat atgcaggaat caattaaacc tctgaatgca tcaatttcct
      121 tcaccagtac taatgataat aataataatc gctgcccatt gtatagggca ccgcatgtaa
      181 tgtttctaat gcctgctaat gaaatgtgcc attaattatt agaatgtggt ttggttctga
      241 aagccaagta ccagcgtgtc tcaacttcta ataaagtgac gcaacttgaa cgtttctaag
      301 cgctcacaag cactacagca aatcctactt aaaaatcaaa aggcacttaa atcagtacga
      361 gcacttctcg ctcttgccag cgccgccgag aaatttgcag ctaaggggtt aatcagatta
      421 gatgggagtg gttacgggct tggtgccaca ggttttgccc tttgtggctt ctcacatccc
      481 agacttggaa aatatgagct gtgatactga gaaaggtaag aagccagcac agccccatag
      541 tgataaatga gtttgcatca tctgtcatta gaacttcctg ccaacagggt cattccctat
      601 taaattacca cttgtcaatg tttaaaatac tgattgataa atgactgtgc caaaactgat
      661 aacacgacag cttttatttt ctaatattct tggttaccac attctgctac ttcaagatac
      721 agatacagcc caagtacttc agtgaaagac aatttaatct aatacaaaac taacaggtac
      781 tgtatagtga ttggtcctgc tatacattac atactatttt tcttgccaaa ataaacctac
      841 cggcgattta gcgatacggg tagatccaag tttcacattt catcaaatgc tagtaatctg
      901 ttttatcaat ataaa
//
LOCUS       KCKM01002496             621 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39201apa ultra-conserved element locus
            uce-4342, sequence.
ACCESSION   KCKM01002496
VERSION     KCKM01002496.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 621)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 621)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..621
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39201apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>621
                     /note="ultra-conserved element locus uce-4342"
BASE COUNT          203 a          142 c           98 g          178 t
ORIGIN      
        1 atcaataaat acccaatgac aaactgtgac agtaacagga aaaggtcatt agaattgtga
       61 cacagaccct gagatcacca ccccagccat caaaatgtta aaacaaacta cttgatatta
      121 acagccttta tggaacaata agaactatta aagtcagatt agtctacaaa caaggaagcc
      181 caaactttca agattgttgc cttactgccc tcgagagttc acctctatct cccacgaaaa
      241 acgccaatat aaaaattcta aaatacctcc ataagcccca aggaaagcct gtggacagac
      301 agatgatgtg atatatttct tccttcccat tcttgggcag cttcttctct ctgcggctga
      361 aagcaaatgc tttgagactc agtcgcatat ttaattagaa gcaagctgct tgcactatca
      421 ccgtgcgaat ctacctctcc aatctctcgt gagtcaatct ttcccatctc tgattttctt
      481 ttatatttat gctagaatat ttaattgtag acaaaaggtt actctggctg tattcactgc
      541 acagaggcag aataatctgc tttaaaaggc ttgacatttc aggcttttca aaaaggctga
      601 aaaaattata tccctgcttt t
//
LOCUS       KCKM01002497            1027 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39216apa ultra-conserved element locus
            uce-277, sequence.
ACCESSION   KCKM01002497
VERSION     KCKM01002497.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1027)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1027)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1027
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39216apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1027
                     /note="ultra-conserved element locus uce-277"
BASE COUNT          317 a          203 c          189 g          318 t
ORIGIN      
        1 aagaaccttt cttaaaaaaa aaaaaaaaac cctcacacaa atcattgata ttaaaaaagc
       61 ctaggaaaaa aaagcatctg ataattacct tctgcctgaa cttcaggaaa gttgagttcc
      121 acaatccctt tttctttgat taaaatgaat gtttgtgatc agcattacta tttactaccc
      181 catgatcaaa aacaaataac ccactttgtt tgtttcttac tgcaaatgaa ttaaattaga
      241 cgccattagg agcactagct gtttatatcc ttgtttcagc agtggtagta tttgaagttt
      301 cctgcggtaa gttcattact cgtattttgt ccagaattag tgaagcgtgc tgaaaattgc
      361 taatgacaga tgtttctcca ctctgtcaca cttcttgtat catttgattt ggaaagcaac
      421 atacggtgtt ctgctctatc agtatgtcac agactgtctg taaacagctg gtcataactc
      481 agttcagtga aaaccattac tttccaatga agtgctggac accctccaaa ttgcattttg
      541 gcatggcctg agctgcataa tgcacaaagt tcttctgttc tgaggttacc taaggaagga
      601 tttttctccc tcttccactt gtttattgtg tttcaggaag taaaatatcc ttttaaatgg
      661 ttaggtaagg gatgaacagc acaggaaaac aaaatgcttt ttcttctctc aggaaccctt
      721 aaagctgtga ctggtgctgt gctaaaaggg aaaaaaaata aatgcaaccc tacctcacca
      781 tttctgtttg tgcctcaggt tgaatggggt gtattatcgg ggtcagggca cacaagatga
      841 tgacagattg aaatgtctcc tatcaagtag ttgtggcagt ctaacattgc tatgactatg
      901 gggctattcc acagctccta atcacaatga atcctattaa aaacatctcc ctgtggttta
      961 cgtgatggtc agatgcaaag aaatccattt cagttatgcc tgtgagaagc acaaaataca
     1021 gcatgca
//
LOCUS       KCKM01002498             793 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39230apa ultra-conserved element locus
            uce-4443, sequence.
ACCESSION   KCKM01002498
VERSION     KCKM01002498.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 793)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 793)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..793
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39230apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>793
                     /note="ultra-conserved element locus uce-4443"
BASE COUNT          233 a          136 c          167 g          257 t
ORIGIN      
        1 ctggctaaaa ttcaacattt atatcatttt gttgatggtc tgcttatcac tgaacaagtg
       61 aatgcctttt ggcaggtcaa gctctttgac acatggagcg aatgtgttct taatttctcc
      121 caaacagaag aattaatata ataataatta acacatgaga acagaattaa aaccaagtac
      181 agtcaagagt tcagtttaag gccaggcatc tcacattata gatgttcttg ggccagattt
      241 tttcctgttg agcgtaggga ggatattgtc attggcactg atgggagctg gagtgggcct
      301 tgaacgcaga gagacaggat tccctgtact tcctatttaa tgctcaaaac cagaagccac
      361 aggctcattt agtatcagta aaggtcagtt aaaattatag atacatcctt tggagcaaat
      421 cctctgcctt gtatttgcat atttatgaac tagagattac gacaggctat tccatttatt
      481 agagcagccc tgctgtagtt aatagtctgt cagtatttcc attataaacc ccgtttttca
      541 gtgttttaat attttagcca tttaaaatca catcaggaag caagttggtc ttacgttgtt
      601 ggccaggtgc aattttttgg tttgggttat tttcagtaat gaaataccgt tcatagtata
      661 tgcaaatgag ccacagaatt tctgttgggg ggacacagca aagttcataa gttcattgca
      721 gctttgtttt tctttaggaa agaagggaaa agggatttga ccaatcatgt catctggggc
      781 atcatgtttg aag
//
LOCUS       KCKM01002499             569 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39246apa ultra-conserved element locus
            uce-5973, sequence.
ACCESSION   KCKM01002499
VERSION     KCKM01002499.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 569)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 569)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39246apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>569
                     /note="ultra-conserved element locus uce-5973"
BASE COUNT          127 a          172 c          158 g          112 t
ORIGIN      
        1 gctgagacaa gacccagcat taaaatcagc aacctggagg cttggtatcc cacagcacag
       61 gggatgggca ggggtgggca gggacagcag ctggggaagc ggcatggcac atgtttgcag
      121 tcggggggac aagggacacc tgccctcttc tacagaacag cccagcctag ttcatacctt
      181 cttcacaagg atggtgaggc cctggtactt gaagggcttg gagaactcaa tgtactgtgc
      241 ccgctcgttg ttgatggtga ggggagccac gatcatgtct gcctggccgc tcagcagctc
      301 ccccatcatc ccgttccact ccttcttgtt gctgttgttg acctgccaga gagccagcgc
      361 aggatcagcc cacggccctg actcctgtgc ccaacagcca ggaccccccg aagcgtggca
      421 ggctcctacc cctgctcctg acaagggcct gggggcattt caatacacga tacaggcaga
      481 gatatcacag gctgctcaaa ctcacccgct cttgggtacc aaatttacca tcagccacca
      541 ggtgaacctc gtaggtgaag ttcatcacc
//
LOCUS       KCKM01002500             533 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39262apa ultra-conserved element locus
            uce-7082, sequence.
ACCESSION   KCKM01002500
VERSION     KCKM01002500.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 533)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 533)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..533
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39262apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>533
                     /note="ultra-conserved element locus uce-7082"
BASE COUNT          115 a          109 c          138 g          171 t
ORIGIN      
        1 tttagtttga agtgccattt tttgaaaggc agagttttct gtaagaaaag gaaggtcact
       61 gatgttgctg agtgcaccat ttcccctgaa tttcatgcgg ctgaaattga attcgtagtg
      121 tggttttgcc caagaagcct ccctggataa tattaagtgc tgtccatgat tctgtagtcc
      181 agatggccca tggctggcag ccgtagaaaa ctggtttctg ctcagcagtt cttcactaat
      241 ctggagtgat cgagccagcg gtactttaag agatgtggag tggccataac cttccctggt
      301 tccatcctgc aagcttcttg gaggtacccc atcaccactc tgtagtccct ccggatggtg
      361 ctggctgggt ctcccaggtc gcctaattgg atggaaggaa actgatgtga gcaggacttg
      421 cacaggtagg gagggatggg tgagggggcc actcctttat tagaaggcct tgcttgggta
      481 acatcacgtt ttgcgttttt ttttttctct aaatttttta ttttatttta ttt
//
LOCUS       KCKM01002501             295 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39278apa ultra-conserved element locus
            uce-4045, sequence.
ACCESSION   KCKM01002501
VERSION     KCKM01002501.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 295)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 295)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39278apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>295
                     /note="ultra-conserved element locus uce-4045"
BASE COUNT           97 a           63 c           56 g           79 t
ORIGIN      
        1 aaggctaatg ttggttgttg gtcaagcaac aaggtccata taacaagcac agctcaacag
       61 cacaaagcaa gtacagattc caggtgtctt cagtttcttc ttggaacctt ggggggtttg
      121 gaatcgccaa gtcccctgta gagaaagatg ttcccttggc ttgcttccga ctccctactg
      181 caactcaacc accttgagtt taatgttata tcatttatct aaattgcaaa agacgaacaa
      241 gcaataatga gtacacaacc acaaaaaaag aaaagattgt ttttaagttc taaac
//
LOCUS       KCKM01002502             541 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39292apa ultra-conserved element locus
            uce-2266, sequence.
ACCESSION   KCKM01002502
VERSION     KCKM01002502.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 541)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 541)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..541
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39292apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>541
                     /note="ultra-conserved element locus uce-2266"
BASE COUNT          145 a           88 c          117 g          191 t
ORIGIN      
        1 tagcttcagt aatctctcca gcagaagcat atttgtgtgc cattttggga atttctctga
       61 gataggaatc ttgaagatag aattaatttc taggggaaac ttcatagcct gtgcatgagt
      121 gctttcttta tcacctgtct ccatttggca ttcggagaag gtaaatcaaa gtgcgcgatt
      181 tgttattctg ctccacttga gagctgaact aaataacact tggtctgaaa ttctgattga
      241 agttgtagga ggatatactg tatttaattt aatgcccttt aataacatct tcttgttcag
      301 ctctgatgct gtcattttaa aggttggatc ggagtagttt ttccctgtag ggagtgggag
      361 gagtaatcat ttcaggggta aaaagtagtt taaattccta gaacactaat agccacaaag
      421 ttggcctagt gtctgagcag ttgttttttg cccttagggt tcactttgtt atcactcttt
      481 acaatgctct gaagagttta ggtacaaata ttgcatgtag aagttgctga catttcttat
      541 a
//
LOCUS       KCKM01002503            1119 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39307apa ultra-conserved element locus
            uce-6262, sequence.
ACCESSION   KCKM01002503
VERSION     KCKM01002503.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1119)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1119)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1119
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39307apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1119
                     /note="ultra-conserved element locus uce-6262"
BASE COUNT          294 a          302 c          230 g          293 t
ORIGIN      
        1 cccggtactg atgacacaaa atgccaattt caccttcaga acccttcacc atttacattt
       61 caccccctca aaatcaaccc accaaaacca aacgttatta ctgtttctat aagggtcgat
      121 aagaatccat cgaaaagatt aacgttagtt ttttgctttt gaaatatcgc tcaacctcta
      181 ttaaaaaacc aacacgctct cgacacgtaa cagcgcgggc acggctgtca gtttattttg
      241 cctgtccttg acagcagcga aacattcagt gagcgagcgc catcggggga gataaaatgc
      301 tacgactgca cgaagtcaga gtctgtacaa agcaaggcca ccaagcaagc caatgccgct
      361 cacgctgggt tccttacctg tcaaaggctg tcccagctcc gcctgcactt tacccttcgc
      421 tgctccttcc agaggtaaag cacctctgtc ccctttgtag agtttcggtt taaatggaga
      481 atctttgtct ttaccttttg atcctttagg cctgcctgct tgcttcttct tggatttacc
      541 atctcccttc acacccagca gcggatggac ttctgcggag agacaacgcg ttaccaaagc
      601 caacggtccc ttacgatgct tctgtcagca cgcgcagccc tcggcgttag ataggatcag
      661 cattcaacac gacagtttca ggatgccttt actcattgcc agcttgcaaa acgccaccaa
      721 atctgcagag ctggcagcta tttaagaagt gacttcaagg aaatgaagga gcgaccttct
      781 gaactacggg tcttcaggca aagctaaaaa catctcaggc gcagaacggc actaaactaa
      841 gggcagcttc tacgcaccat cgttaggtac tccttgtagt tcaatgttgg tggttttggg
      901 cttcttcttt ggtgcctgag gcccatcaga ggaggactgc ctcttcttct cagaacctat
      961 tccctcatca gttaaagaac tctgaacagc atctggtgga ggtccatacg ggttttcttc
     1021 tggatcttca acttcaggag caataggtaa gtaaagcaga gccttggagt cctccagttc
     1081 ttcatcactg tgaacaaaaa aaacctgctt tcatttaaa
//
LOCUS       KCKM01002504             760 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39323apa ultra-conserved element locus
            uce-4484, sequence.
ACCESSION   KCKM01002504
VERSION     KCKM01002504.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 760)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 760)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..760
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39323apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>760
                     /note="ultra-conserved element locus uce-4484"
BASE COUNT          205 a          162 c          151 g          242 t
ORIGIN      
        1 ttagttatct ttttgtgaca gaatacaatt ctcctcgtaa acttcagcag gagctctgta
       61 gtcagatctg tagctctgtg gaattaccta agtatgctga tctgtgaata tgtgaccagg
      121 aactagacgt ttctacaacg gagtggcatt gatgtgcgct gctgtgaaaa acacagatgc
      181 tgacacacag ttgcagaact tctcggatga gctttcttga cacttgcctg ccctgcctct
      241 tccttctgag cctgtgaaag aaaagccaca gcttgtgctc ccattccggc tactgacttg
      301 tgcgttccca ttttcttttc tttgcactgc aagctctgtt tgtagttata cagtcaggtc
      361 tccacagagt aatttactgg cagaatctct cccagaatcc agcttgaaac caagctgtaa
      421 aaacagctga gagtgtaaat aattcatgca gacaatatga cttttttatg taaattcggt
      481 gcattaaccc tctattataa tgatggacga cagatatggg cgacgttgcc ttggtaagag
      541 ctaatggatg gccgccataa attcactgca cattttattg tgttgctgga aattgtgcct
      601 tcaggcaatg ctgtttactt ttatgtaaaa ctcagggttc cctaaatatt acaaatattt
      661 tacatccgac tcctcagcat ttgggcacaa cacacaaatc aagctttctt catctgagtt
      721 gtaattaaag gtttgttttt tcagggacaa ttatctaaaa
//
LOCUS       KCKM01002505             303 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39338apa ultra-conserved element locus
            uce-6034, sequence.
ACCESSION   KCKM01002505
VERSION     KCKM01002505.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 303)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 303)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39338apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>303
                     /note="ultra-conserved element locus uce-6034"
BASE COUNT           95 a           52 c           55 g          101 t
ORIGIN      
        1 tgtaggtatt tattcagtaa tcaatcatag agagaaaaga cctcgaattt cagttggaag
       61 tttttatttt tatccttttc cttactactg gtctttaaac ctgctctgag gaaagctata
      121 catgcccggc tggtgctcat caaaagcaag caatcacagc taaatcagca tgcaaaatgc
      181 cactcaacct tgggccttta ttaaaatttg ctgggactca atttgagata gcgatcgttc
      241 ttattaaaaa gcaaaatgta agatagtttt tttatataaa tctctggatg gaatggaatt
      301 gtt
//
LOCUS       KCKM01002506             547 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39352apa ultra-conserved element locus
            uce-5596, sequence.
ACCESSION   KCKM01002506
VERSION     KCKM01002506.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 547)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 547)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39352apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>547
                     /note="ultra-conserved element locus uce-5596"
BASE COUNT          167 a          128 c          120 g          132 t
ORIGIN      
        1 gtcggtgcca cccacacacc cgcgccggcc acatcgtcct cgccatcctg aacgatgcca
       61 caggccgctg gcagcaggag cgctgagctc gtcataagtc atttagtgag actcattcca
      121 aatcagcgct aaggtaaaca cgcttattat aattatccat gtaaaaaaaa aatcaacaac
      181 agcagaacaa ctttctaata tgcaattaca gccatctatt gattttacaa tgtaatccgc
      241 tccgattgat ttaataacac aattataggc tggctctcgg gatattagag tgggagattt
      301 tcataaactc caaagcaaaa aactaagcgg cttttaaaac aacacagtca gatggctgtt
      361 tggggaatta ttagcaatat gaaatcctct aaatctggcc gtcgttacct tgtgaaagga
      421 atttctatta cgaaaatggc aattgacagc ctaagagagc gcgaacggga ttgctttgct
      481 gctttttcag cgcgtaatcc atcgcaaagg tgaccacggg ccgggcgacg agcagggtct
      541 gaggcag
//
LOCUS       KCKM01002507            1029 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39368apa ultra-conserved element locus
            uce-3580, sequence.
ACCESSION   KCKM01002507
VERSION     KCKM01002507.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1029)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1029)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1029
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39368apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1029
                     /note="ultra-conserved element locus uce-3580"
BASE COUNT          300 a          235 c          233 g          261 t
ORIGIN      
        1 cctgccaaga atggtcaaac tagaatttta aggattgttg aaagaaatgg tttaccttgt
       61 tcctcacata agaactccat cattggataa tactctgtca cgaatgaata gctgataaag
      121 aaaaagacct ggttgttaag taagtgattc catccccagg tagcttggga tggtgttatc
      181 cctattggat cccacacggg ccaggttctt tatcaagctg aacaagagag aaagataaca
      241 gagagcttca tgctaaacag tgataatatt aaaaaaaaaa acccattggg agaaaacaat
      301 gttgttcagg gtggctactt tagcatccct tctgcttgac tctgaggagg acaccagaaa
      361 ccgttcacta gcaggcgcag ctatgccaac tggagaagat aaaggtttca gtgacgcagc
      421 attgctgacg aatccaccgc cacccagaca ctgaaattaa agctgggaat acgtgtgttg
      481 ccggcccaat tggcacccat taaacctaat aactaaccat ccttgcgagt tcctagctct
      541 gaattatcaa atctgcaaag aaaacaacat ccgtccactt ttacactcca gtggaagagg
      601 tggtccctcg cggcggggct gcgcggtctc gccatctgga gaataaatcg agtgtgaagt
      661 acagtatagt ttgggaccaa gctccgtggc agcagcccag cagttagttc attagcccca
      721 aacttgtggg gattagcgca gtatcagctc tactgtcgga tgggatcagg caggcagagc
      781 gcgagactcg gggaaggggg tggtggtgaa gaaggagccc ccccagctta tttgtaaaaa
      841 ctacacagta taagcacacc taaagaggta cctttggtaa caggtttact ccagtctcct
      901 actagccaaa tcagtacctt tcttcccttc cttttctttt atttttctcc ctttttttct
      961 ttatgtcata tgtcaagaca tttctgcttt gaaacagaag gaatgtcaca gagctggaag
     1021 ctcaaccac
//
LOCUS       KCKM01002508             967 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39383apa ultra-conserved element locus
            uce-1255, sequence.
ACCESSION   KCKM01002508
VERSION     KCKM01002508.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 967)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 967)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..967
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39383apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>967
                     /note="ultra-conserved element locus uce-1255"
BASE COUNT          233 a          185 c          264 g          285 t
ORIGIN      
        1 gggaggaaga aggaggtgat gtcaaaccct ctgctttatc cttctcttcg tgaaaagtca
       61 tgttcagttc aggatttggt gaggtaaatg tgggtcctta ctcccaccct gacttcagtg
      121 atattcttcc agcagcaagc ggatccctcc cctctgggac tgccttgatc ttcaggggct
      181 gataccagac acaggcaaga gcttgctgtt ttatctgcat tgtccatctc taccttaatg
      241 agtgaaatgg ttaagtattc gaggcggcga gcctcgagga atgtgtcttc catttgactc
      301 aaatatttcg gtggataaag ggagagggag ggagaggaga gagagagaaa tccacttaca
      361 tcactaactg cattgagtgt gtgcctgtgt gcaggttaag agacagacta cagtgtcttt
      421 gctttctgca ggaagcagcg tttgtatcct aagaggaatt ttttatttag aaaaggaagc
      481 attctttcta cccaggaaat ggctttcctt gtgcgttgct atgccaactg cctgcagcca
      541 tggtcttcca aagtaagcac aataacgtaa ttatattggc gtattgcatt cagactcatg
      601 attctctggg tttttgtgtg tgtgtaaatg tgttatattt ttgttgctga ctctctgggc
      661 agtagacgtg cttgtcttga ttgcaaggaa caggcatcat aaaattaaat gtccatcaat
      721 gtcatgctgc taagattaat tgtgcaaact tggttagctg agtggaacag agatcactgg
      781 tcactactct gtcagcatca ttagcagcca ggggaggagg tccctatttg cgtgctctgc
      841 cctgattttg ggggagtgga gggtagtggt ggagcggggg aggctgcgtg tgcgagtgtg
      901 tgtgattgca aatgaaacag gagtattaac aatgcttggc tgaatgctgg aggctggttc
      961 ctgcacc
//
LOCUS       KCKM01002509             827 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39399apa ultra-conserved element locus
            uce-4416, sequence.
ACCESSION   KCKM01002509
VERSION     KCKM01002509.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 827)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 827)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..827
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39399apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>827
                     /note="ultra-conserved element locus uce-4416"
BASE COUNT          266 a          167 c          156 g          238 t
ORIGIN      
        1 agtaatcaac atttttaaaa agttctttca caaataaaaa aaaaaatctt aacttttgct
       61 gcatcgtaaa ccacacatca gtccagcaca ttacagggta tattttcaaa gggcactggg
      121 ttttgagtat gcaaaaatca ctatgaccta tctgaaatag ttgattaacg tgattgtctc
      181 agactgcaaa tagagagcga agaaccattt accatgttaa aaatcaggga ttctgattct
      241 ttaatttgct tcagccttga ctgtatcagt cccacctgaa aagatctact gcaggtgcct
      301 cttgccgtgc cagtatgggt gcacagcaga caaaagacat accagaaagg ggaagacaga
      361 tatgccactt aaattaaata ggaaatgaat tggccagcaa gttggcatgt ctgctgagac
      421 aaatcataga caacatgtct ctcaacaaca gaacttattt gttttctctt gccaacagat
      481 tcatcactgc ccaggcaaaa caggcaaaat acattagtgt catggtaaac tgataaagag
      541 aagtgcctca atctagcatc ctcaatggcg aaagtcttag ggctgtattg atctgtgtta
      601 tataaatctt gttttctgtc tgcagaagtg aatcaggaat gacccttaag gttaacaaac
      661 attgtaatgt ctttcagctg gggcagatgc ctatgtgctc cacacattgt atttggtcaa
      721 gtcccatctt gtcattttac tgccaaggag cttaactaat tgctggcaat cataagacag
      781 tttgatggaa gcaaagaatt cctacaattg ttgcccctct ccctttt
//
LOCUS       KCKM01002510             711 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39414apa ultra-conserved element locus
            uce-6441, sequence.
ACCESSION   KCKM01002510
VERSION     KCKM01002510.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 711)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 711)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..711
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39414apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>711
                     /note="ultra-conserved element locus uce-6441"
BASE COUNT          189 a          118 c          133 g          271 t
ORIGIN      
        1 gagtatatgt aatattatac acaaggaaac aaagttaatt ttcttcaaat acacagtaca
       61 gtatatagat ggagtttcgg aaaaaatagt aaaatgaaaa gtgtaatgct attttcctaa
      121 gccacatttg ctaaatgcag acttttgcaa ggtcagcagt tatactggag ttgagtagaa
      181 atggcttcag tggctttaac tttaccagtg cccttgatga ggtgcagagt tgtcagtatt
      241 ctcgtaaaat tcctcagtga tggcttcttc tgttctcttt atttccttaa gtgaacatct
      301 gtctaattgt tcacctccat tgctttagtg ctttcctcat gctttctctg tttccagaca
      361 ataaacttta ttttcttcat aagaattcag tctacgcaag ggtattaggc agcttgtttg
      421 caccttttaa tttctggaag ttttccagaa gggctttttg ctgtagttcc aatgggttca
      481 tcagtgaatc atgtaacata atgcagcatt gtgtttgggt ttttatccgt taccttctgt
      541 ttataaacat ctgcttgcaa attttctttt tgaatttttt tttcatatgt tttacacttt
      601 tgcatgtggc atatgggtag gatatacagt agctgctatt tttttcaggt gttcaggtag
      661 gtacagtcag tatttacctt aaaattggga aaagcctaag ctacttgctt a
//
LOCUS       KCKM01002511             643 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39429apa ultra-conserved element locus
            uce-510, sequence.
ACCESSION   KCKM01002511
VERSION     KCKM01002511.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 643)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 643)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..643
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39429apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>643
                     /note="ultra-conserved element locus uce-510"
BASE COUNT          185 a          101 c          147 g          210 t
ORIGIN      
        1 ggggtccatg ttagttccag ctccactgtt gccatgtgaa aagcactttg gcaatctctg
       61 aaaagaaata aaacccagag ttgaagatac aagtgtgggg agggaagagg cagaccttac
      121 tgtttattta tttgcatctt ttttttgttt ggtttagttt tatttgtttg ggcaagtttc
      181 ttgccattta cctttgcatt tgcatttcct attgattggc aatttttaaa ctgtttattg
      241 tgatcttttg tttagctgtt caagagctaa aacaaaagcc accaggccct gtgagggaca
      301 catttgcatg cggcgagcgt tgcccgagga aatagtaatt gctaatgcat atttatgtgg
      361 cacaaatttg ccatttgttt atgcataaaa ttatcaatag tgcagggcgg cccagccgta
      421 gaaaatggtg acctttttag cttaataaat agaaatcagc tgttattgtg aagagatcag
      481 ccatttattc tgtgttgagg gacactgtcg ggaaaatgta gattggtgcc ggcaatatca
      541 ttaaatggaa ggccagtgac cctttcggta tagtctatta tactttatct aataggggat
      601 aaatgactct ggttggcaaa tagattaaaa aaaggaagaa aaa
//
LOCUS       KCKM01002512             688 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39444apa ultra-conserved element locus
            uce-4646, sequence.
ACCESSION   KCKM01002512
VERSION     KCKM01002512.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 688)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 688)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..688
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39444apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>688
                     /note="ultra-conserved element locus uce-4646"
BASE COUNT          211 a          126 c          133 g          218 t
ORIGIN      
        1 tctttgtaga gtttaaaagt acacgcactt cagtagtgca cctcagtgca attggacatg
       61 cacaaaactt tacatgaatt tgaagattca ggttgcttgc ccactttgca cgggggttaa
      121 aagtgaacaa gttacaagca aaatacacat attcattatg aaacatctct gttgcagtat
      181 aggagacata ttggagagtg aactatgtat tttggagagg ggctgggaac atgacaaggg
      241 gaactttcaa ataaaacttg gtggaccttt ttgcagtaga tttgaaaata agtccagaag
      301 gctgcgttta atataacatg tggcaggtgg cctgcatttg cctggagaat tcctctaggg
      361 caagacagct cagcaaacac ataaatcctt ttttctctgt tatctagtag cacatttagt
      421 tgccatggga attttattta tgcagcagat cctctgcagt tcagtttgtg cctaaagttt
      481 aactgtacag ctgttaccgt aaatactaca tggcaatatt ttcaaaacac acaacctttg
      541 aacaaaaaga acatgtcttc tctattattg attttgttat gttatcaaaa caccattttg
      601 attaccctag gatagtgttt ccctacaagc ttcataagtt gatgtaaagt gtgcacctcc
      661 tgtatagctc ttcctaataa ttattcat
//
LOCUS       KCKM01002513             442 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39459apa ultra-conserved element locus
            uce-101, sequence.
ACCESSION   KCKM01002513
VERSION     KCKM01002513.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 442)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 442)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..442
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39459apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>442
                     /note="ultra-conserved element locus uce-101"
BASE COUNT          134 a           80 c          104 g          124 t
ORIGIN      
        1 gtgccgctca ggcttgggct tgattaccac cttaaaatct ttacctggct atgatctgtt
       61 gttccattac tggagggcaa aaatgggagg aattgtctgg gctaaattgc aattaggcag
      121 ccctgagaga ggctggcacc agttaacttg ggatattgga gtgaaaaggc ccgtaatcag
      181 ccttcggtca tgtagaacaa tgcataaaat taaattgaca ttaatgaata attgtgtaat
      241 gaaaatggaa gaggagagtt aattgcatgt tacagtgagt gtaatgccta gataaccttg
      301 catttaatgc tattcttagc cctgctgcca agacttctac agagcctctc tctgcaggaa
      361 gtcattaaag ctgtgagtag ataatgcagg ctcagtgaaa cctaagtggc aacaatataa
      421 caagagtttc tttcagacct ta
//
LOCUS       KCKM01002514            1029 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39473apa ultra-conserved element locus
            uce-492, sequence.
ACCESSION   KCKM01002514
VERSION     KCKM01002514.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1029)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1029)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1029
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39473apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1029
                     /note="ultra-conserved element locus uce-492"
BASE COUNT          321 a          227 c          206 g          275 t
ORIGIN      
        1 gaattttaag tttagttaat ttgactataa agcgctacaa aaggagacaa aaaccagacc
       61 tctgtagcac ttagaaaagg tcaaggtgat aaagcgttca gatactctgg actttggttt
      121 cctaacgttg cctgcgacct ctgaaccaaa gatgccgtct tggatatgcc gcagatgatg
      181 ttctcctatt gacagtctcg ctctatgtgc aaaggacaga tgcgtctcaa cttgccaagt
      241 taaagccaat aaatccatag ctttatatca ggcgagctga tatacggccc cctgcctttt
      301 gtcatcacag gcattcactt cccccggccc ccagaaagag gggcgcatta atcaaacatc
      361 aacaaagaac acttatcaaa caccggccat gaggacgtcc aggcctccaa caagatgaca
      421 gctaaagtgt gcactggggc tgtaattact acacagaaag ttgtttctat gctagcaaag
      481 ataataaatg aatgaaaatt tatggcaggg aatctaagta gcaaggaaac agaagcaggg
      541 agactggtgt ttctcccaaa aggccaactt gcatcataat tgccatgcag ttgcaagggt
      601 ccttacagat aattgaccag aaaatgatta agtcatcatc aaatcgcttc tgcttgcaag
      661 agttcaaaca tgtacttaac ctatccaaga attatatttt cactctgtgt gtctgctctg
      721 tctctattca gccttgcggg gaacctgatt aaaaagacaa ctgaaggacc cccgttatct
      781 gatcttctgg ttgccgattt caatagaact taaacccatt acgatttgct gaacttggag
      841 ttctttccat tttatctcag cagtaaaata cactgtccaa atttccagac actgagataa
      901 ggactacagg cccccgtgac ggcttactgt tcctttttaa ttcttttaga ataagaaaca
      961 aaacattaca aaatgatagc aggctgtgca ctggggaatg aaaattgctt tgacatggag
     1021 attaggctc
//
LOCUS       KCKM01002515             755 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39487apa ultra-conserved element locus
            uce-7054, sequence.
ACCESSION   KCKM01002515
VERSION     KCKM01002515.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 755)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 755)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..755
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39487apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>755
                     /note="ultra-conserved element locus uce-7054"
BASE COUNT          189 a          138 c          158 g          270 t
ORIGIN      
        1 tctttctccc taaaaagtgg acacacgtgc ttagtcctaa cctattgtat ttcgatgtcg
       61 atgcgaaatc tgtggttgag atacttttct ttttggtttg gtttctgtcc tgacagtttt
      121 caaaattgca gctgtgtttt tctcttccga tttacaaaag gtttcgcaga gagttgagaa
      181 tcggataggt tcgccacatc gatctgagga ttgtttgcct aggcatacag tttcagtgca
      241 tggctggcaa gtacggcact aagcggcaat ttttttgtgc tcagctgcta catgtgacag
      301 aggatatttc tttcggctgt cagaatgtta ttaataaaac atggggtgcg aagagggcca
      361 ctatttcccc tttcaatcac tatagcattt acaatgaaaa ttttatgcag tgtgtaattt
      421 tcagttaatg cttgacactt aaaatgtcgg tagctgcatt ttgtatggtt cctgaagggt
      481 taattgtatc atgttccctg cataaaagct ctgcttatca aaagtgaata gaagagtgta
      541 tgcaaatgtg tgtctgtgac cttttgcctt tccagggtta atttatatgg tcattaaaga
      601 ttttatgaaa ttgagcggcc tggtgcttcg aatcccattt taccttcacc tcctaattta
      661 tataattcct acctgaactg ggaaatatga tttttttctc tttcccaagt gtgttgaatc
      721 tgacatctgc gatttggcaa aagcgaaagt ctttc
//
LOCUS       KCKM01002516             977 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39502apa ultra-conserved element locus
            uce-2253, sequence.
ACCESSION   KCKM01002516
VERSION     KCKM01002516.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 977)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 977)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..977
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39502apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>977
                     /note="ultra-conserved element locus uce-2253"
BASE COUNT          315 a          202 c          145 g          315 t
ORIGIN      
        1 atcatgctca aagacaacaa tttcagacaa tgttgttcct taaacctcac ctgagagcaa
       61 aggagcatca ccagctccac aaccgaactg ctagatttca tgcacacaag acctacaaaa
      121 ggaaaaaacg gtacacgtaa atgcatgctt atatggcacc agctgttaac acaaactatc
      181 ttgaagtgta ctagatgaga agcatcttga caatcaaaag caagcttaaa tcaattctgt
      241 actttattaa acacaaaata aaagtttgta tgcaagaggg agatcataaa gcccatgact
      301 cgcttctaag gatgcagcta acagcaatac tttagctctg ctgttcacag tttcatacat
      361 gtttgcatga caaaacgatc agaagtgtgg ttaacatgtg ttatattaat ccactgtatc
      421 tacattttgc tatttcttga aggattgggt cattatatat gcagggaagg gaaatggctt
      481 tatgaccttt gctttctcca ttgcgcgttc tcctttcagc ccccagctat caatcaagtt
      541 tccattttgt ttcatggcag cagacatccc aaacactctt attagtactt tgacccttaa
      601 ccccacacta aaccttagca gaagtgcaag caacaaccta ttatatattc tcaattgttt
      661 ataaactaat tttactacta tgattattat ttgtactcga tttttttgtg tttgtctata
      721 actgggtttt aggcctcaaa attaggtttg tgtctttatt tttatctaga tagttcacac
      781 actcctaaca attttcctgc ctttttttgg tcacccaacc taagaaatac tcatctctgt
      841 gcatataacc tatactacag taaaaatatt ttgaaaccgc attatatttt cttcactttc
      901 agacaagaaa aaaaactaac taaattgggt atttatctcc ctggtaaata aagctttgaa
      961 atttaatgaa gtctcaa
//
LOCUS       KCKM01002517             705 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39516apa ultra-conserved element locus
            uce-5230, sequence.
ACCESSION   KCKM01002517
VERSION     KCKM01002517.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 705)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 705)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39516apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>705
                     /note="ultra-conserved element locus uce-5230"
BASE COUNT          150 a          161 c          192 g          202 t
ORIGIN      
        1 tacaatgcac agcggagtca acagatccca cagactgcac agccagcagg tatttacatc
       61 tgttagttga ttaattgaca tcgttccttc agccgctcgc agtgccgttg ctgatgaaac
      121 ctattgcttg ttttaattct ggctttgaac agctgaggag agagctgatc gctgttctgt
      181 tgaaaatttt gaattaactc tttgcttgga gataccgagc ggtggaagag ccaaggtcat
      241 gttgtccact gttgccgccc ggcgcgcggt gccatcttcc cggtcatatt acatgttcaa
      301 gccaactgtt gcgatttgtt ccttcattct tccaactccc caaacgtttt taagactctt
      361 aactggcaga cacgtttgca gcgatgctcc actaccacct gctcttccag agcccgagga
      421 gtggcaaggc gtgggaccag ccccctgcag tgacgtgcag ctgggagggg ggccgttaca
      481 ctgtaagaga gtgagtagca ggtctcacag tgaaccggtc tcttttcctg ctgtgtcatg
      541 ccacaagtaa gagagacgta ggtggaaatc ggctggtgcc cgttggggag ggggcagggg
      601 ttgtgcttgt gtaggggccc tcgcgtttcg ggggaataaa gagttaatct gggtgtggag
      661 attatttttt ttaaattatt gattttttct ttattgcatg tcttc
//
LOCUS       KCKM01002518             950 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39532apa ultra-conserved element locus
            uce-6865, sequence.
ACCESSION   KCKM01002518
VERSION     KCKM01002518.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 950)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 950)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..950
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39532apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>950
                     /note="ultra-conserved element locus uce-6865"
BASE COUNT          249 a          177 c          214 g          310 t
ORIGIN      
        1 tcactgaaaa agaagagaat tcgaagtgag acaagacgat gaaacaaatg tttctatgta
       61 actttcctag aaaggacact cttacttgtt ttgtatttct ggcaaaaata ggactgattg
      121 caaatgaaat acctaaagac cttgtggtta ggcaagaggt ggtctcaagc tgctggaaat
      181 gggatattaa tttttgcaag gcttgcttta gtaattggaa gtagtcgtgg ccatcttcag
      241 tgttgcctgt caaacacaca agatcaagat gcgatgtttg tcacgtccct taacacagca
      301 ctgagcttgt ccgtgagtct cagctggacc gtttcctctg agaatttcag cttttaaaag
      361 tgatggggaa gttttacgtg ctgtccagat tttacttgct cccttgggtt ttgttacctg
      421 ttttgtccct ttttagacag gtgccctagt tcacagttat cggggaacag gagggatttt
      481 tgaagtttgc tggaatgcag caggagacaa agttggagca agtgcttcag atggttcagt
      541 aagtgctgct tgacgtggtt gacattctta ccttactgca aacatcttct ggaaatcttt
      601 tgactaacag tgggaacaat ttccttccgt agctgaggtt tgcatacagc cagctcacca
      661 gtagattttt ttgcctgtaa ggtacctgta agggtgctgt aatcttgaaa ggggaacgtc
      721 tttattccag cttagcgcgt tactgttctg acccctccaa aaatctcaga aagtaaagat
      781 gcctctaatt tagttttttt taccactact ggggcttact gtggaaaagt attcagtctg
      841 gccagtcttt tcattgtagt ctggaaacat attaattttt gcctctttgc ccttttcaag
      901 tacaaaatgt tcaatgtagg tgatgttctt ataatgcctg aaataattgc
//
LOCUS       KCKM01002519             586 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39546apa ultra-conserved element locus
            uce-2326, sequence.
ACCESSION   KCKM01002519
VERSION     KCKM01002519.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 586)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 586)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..586
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39546apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>586
                     /note="ultra-conserved element locus uce-2326"
BASE COUNT          200 a          105 c          101 g          180 t
ORIGIN      
        1 tcagaaaatt atttatttga actgatccat cagaaactgt ttgagtattt ctttttttaa
       61 attacatatc tttccacctc ataaaaagaa actattttag aatcttgcca gctatatcaa
      121 tttattctat caagtaccac aagcaaatgt cacgtaaagt tagtgaaaga aaaacactga
      181 gttagcagac ttttaaatta tacaaagcca tagtagcatg tgtatactca tgggaaagga
      241 cgctcacata agacagatta tggtacttgt aatgctaatt tgcacacggg atggacatca
      301 cacacacaca aaaattaatg tggccccagt gtcccagaga atacatcgaa ggtgctgtga
      361 gccggctgct ccacttgcag tttttatcac ttctgaattg cattttaata gtacattttt
      421 cttttgttca gacatgaaag aaaattggct ttctcaaggg actggatagc tgagaagaca
      481 aggctagcag tttagggatt tgcccatata tgcatagaat ttagttgagc catagcattc
      541 ataattcagt atgaacacta tgtctgtaaa actcatacac aaaata
//
LOCUS       KCKM01002520             720 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39562apa ultra-conserved element locus
            uce-6809, sequence.
ACCESSION   KCKM01002520
VERSION     KCKM01002520.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 720)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 720)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..720
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39562apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>720
                     /note="ultra-conserved element locus uce-6809"
BASE COUNT          245 a          129 c          118 g          228 t
ORIGIN      
        1 aaagtgcacc agccccaata agccttcaag atgcaaagga aagctcacac tgacaatctc
       61 caacgagggt gcattaaatg actacctctt actactgaaa tcctaaagaa ccatttttct
      121 ttacacatct atatcaggaa ttttatttgc ttccacttga aagaaatctg acaaaatgaa
      181 gcacccttac tgaagtggat ggtaattttc ataaaatgta ccgtgaaact ggtaaaggca
      241 aaatcatcta aattctccaa tttttacttc aatttgaagt aaaataatgt gaaatacagt
      301 cattgtgggt ttcttattat aagaaacatt ttacaggtaa aaacaccaat aagtaatgta
      361 tatgaataat ttttttctgg caattccgaa ctgcttgtct ttcataggat ttcttatggc
      421 tatttacatt ttcactcagt gaaaatcaat taccttcctg caataagcct catttgctac
      481 ctttgagtat aatagaaaca ccattagaat gatgacatta cccaaaagaa gggcaccaca
      541 cagttggtag acataaatta aggacccttt cacatatgca ttagaaatac tgctgtgact
      601 gaaatatgca taaaatctgt atctattaga gctattagtg tgtgctggtg atgattttga
      661 aggaggaggg ggagagtgcg atccactact ttgacaaaat tatgtatttc ctcttttttt
//
LOCUS       KCKM01002521            1080 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39577apa ultra-conserved element locus
            uce-1667, sequence.
ACCESSION   KCKM01002521
VERSION     KCKM01002521.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1080)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1080)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1080
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39577apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1080
                     /note="ultra-conserved element locus uce-1667"
BASE COUNT          331 a          175 c          197 g          377 t
ORIGIN      
        1 tgattagaaa tgttctgaat tgatggggac tttctggttt gctcttaaaa tgtagctctt
       61 aaagtacatt ttcctttaca agcttttgat atatttgtgg ctgtttttct gttactcaat
      121 ataaataatg cgtggccact agatagacat atatttattt acaataaaaa ctgacgtatt
      181 aattatttca ttccgtagac aagtatcacc ataaaggctg ggcttataca acataggagg
      241 catcacagca aaaatcataa atagtgtagt tctgtttagc ttgacaatgg caggtaatag
      301 actatcatgt ctgttccctt agctgctgta tccttttcta tccataattc tttattgtta
      361 ttatcacact tatttcagca ttcttatatc agcagcattt agtgacattg cgaaagcatg
      421 gttcagaaag actgaacttt taattgtgat gagaaataag ttagcttaat tattctatgt
      481 aagtagaaaa gatgtggttt gttcttcttc ctaagtcctt ccttcctaat cgcaattcaa
      541 cacccttttt aagcattgct atgtatgaac ttcatgctgc tagacaaata aattctttgg
      601 gaaaatgcac atttttattt ggaaataatg ccatctcttt gttagatttg cagcaatcct
      661 attttgcctc tactgttttt aagtcgaaaa tgaaaaatta tatagaagat gtttgtgcat
      721 catattgtgc tgaatggtat gtaggtcagc atgctgcacc atagcagata aggcacagtg
      781 aacaagtgtt ctatgtactt acaagcaaat atcagtcata atagaagtag acagatctac
      841 aagagcgttt tggcttagga aatgtttctt gtcattagca tttaaaaaaa gctatgagat
      901 tcaggcctat cagcaccgat tcacagcaaa gcctggcttg cacaggttgt tatctgttca
      961 gtacagaggt gcagctggtt agcaaatgga tttgcagatt tttttttttt agcagggatg
     1021 agtaaaaagg caaagaatca ggtacttaca acccattcag aatgtaacaa ttttgtttgt
//
LOCUS       KCKM01002522             719 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39593apa ultra-conserved element locus
            uce-802, sequence.
ACCESSION   KCKM01002522
VERSION     KCKM01002522.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 719)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 719)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..719
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39593apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>719
                     /note="ultra-conserved element locus uce-802"
BASE COUNT          224 a          144 c          115 g          236 t
ORIGIN      
        1 ttaaacatcc aggctttctg aagtggctat aaagctttgt ttttgatttt tcaaactttt
       61 ttctcaaacc cttgctcatc cataatcttt aaaagctcag ctgatgccat gcagagtaca
      121 ggcttatttc tttgctgaac taatctagac actgtctagt gttgagtaca gttgtctgat
      181 tcaaatcttc tgttacaaag cagatgacat ctagctagat gtcatgagaa gagactaaca
      241 atgacaattc acttatccct tagaaagaat caattctccc acaatgcatc tgtcagagaa
      301 ctctcactca gtaaaagcaa tttttctagc tgtctgacac tgtaattgct cttaaatttt
      361 caatgaacgt tttacaagaa ctcccctgaa ccatgatgaa aaacttaact ttttctaaaa
      421 atgagaggct gacaggatga aagaggtctt tctctttaaa gctttgcttg cttgagtagg
      481 aattctttca tatcatcaac aagctgttga atagaggata gattactttc catttatttc
      541 atcaatcaga ttaaaggctc tccttcacaa tgccctttaa acaagagctg tttatgatgt
      601 cctcccaggt tctactttaa tgtagtatta aatcaccctg agcagagagg caggcaaagc
      661 atataaatat gatgaatatc tgacaacatt taagcattgc atacattcag gtcatttcc
//
LOCUS       KCKM01002523             929 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39607apa ultra-conserved element locus
            uce-5278, sequence.
ACCESSION   KCKM01002523
VERSION     KCKM01002523.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 929)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 929)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..929
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39607apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>929
                     /note="ultra-conserved element locus uce-5278"
BASE COUNT          308 a          177 c          154 g          290 t
ORIGIN      
        1 cagttgccct cccaaattaa aactgaaaac tgtcatataa agcatcttca caaccttctc
       61 tatgtttcag tactagctgt gcaactgtta gcctttttta ataattctgc ttttccaaat
      121 catacctcac taaaactacg ctttaaatta gatgcagttt accgttctgt ttgactcaaa
      181 tatttttaag tataagcatg caaaagacat gccatttttc accgctaaat gtatgcaggt
      241 gttaatgaac ttatttaaaa aatcgttctg agcactgaaa agggtaaata cataataact
      301 ctgctgttta caatggtaaa caattgcaag tcataaccac aatattgttc ctagttattt
      361 cagctataac ttgcaaggct tcatagccag acaaaccaga tgaaatatgt tgctgcaggt
      421 ctgctctgat ggatccctct gaaataccca cattattgct tttattttat tatgtaccac
      481 acttcataac tgtacacagc agagtacaat aaaaactgca ctacactcct ttaagtactt
      541 attaaatagg tcaaaaagtt accataacaa ataacttgct gtactcaagg tccattaata
      601 acacatcttg ttgggactct aaaacataca tgggggaaaa aaagaacagt ggagaagtgt
      661 ctattatttg atgctattgc ttaacagttt gcacttaaag agtgtggtat tattagtcac
      721 agctttgctc agttaattgc ttttctaaaa tactagaatt gacacaagat ggaaaactac
      781 attttacaca gatttgaagg aagagaaggg gcaagagagt gttctgatcc tacatgtaag
      841 tccctttgat ttgtgaaggt aaagaaacac catgaagcca agcgctttcc tcctgtttgg
      901 agtcaggaga tctaggactg tgattcacc
//
LOCUS       KCKM01002524             867 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39623apa ultra-conserved element locus
            uce-6696, sequence.
ACCESSION   KCKM01002524
VERSION     KCKM01002524.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 867)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 867)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..867
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39623apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>867
                     /note="ultra-conserved element locus uce-6696"
BASE COUNT          306 a          135 c          182 g          244 t
ORIGIN      
        1 tggacaaagg tgaaattgaa gaagtccgac ttttagccag cttttggtgt ttccgttact
       61 agaaaataat tagagctaat gaatatgcag acggataagt aaataaataa ttcgccagtt
      121 ttatatatgt attcacacac atacatacat acacacacaa agacgcctat agtttaaagt
      181 ttcacgagac gaagcatcga ttaaaatact gtgcaaatgt tgcttagctt aattgattaa
      241 gccacaaaga ttttctgctt ttaaataccg tacttatacc tttcaacaat cattttaata
      301 tatagtcaat ggctctttgt agcgagaaca aaaaagagct atcctcagtt tttcaataga
      361 ctttgagctg gggaaagaca ggttaatcga gggttgcatc tagaaaacaa ccaagtgttg
      421 tatgtttgca ctgaatccaa atgtctgcat ttttctaact aaatcaaagg gagtgttatt
      481 tctttttctg ctcactcatc tgaaggtaag taaattttct ctggcgatca aaagcctggt
      541 cagcaacaaa gacaccgcct gctttttcca ccgtcctggt gtggcaagtt gaggaatttc
      601 aataactgtg acaagggtga ctgatttgtg aactagaaaa ggtttgaatg tcagaaaatt
      661 tacattgctc ctatcgagga tttaaagtaa attttttaca aaaaaaaaag aaatgagagg
      721 gagggggaga gagagaagta tccaggagtt tcatgcagca agaggagaaa caatgtaggt
      781 ttgggaaatt tacagcttta cctgaatgaa agagactccg ttaaaagaga ggaagagaga
      841 aaggcgagaa tggagaaaga aaataac
//
LOCUS       KCKM01002525             861 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39639apa ultra-conserved element locus
            uce-3394, sequence.
ACCESSION   KCKM01002525
VERSION     KCKM01002525.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 861)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 861)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..861
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39639apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>861
                     /note="ultra-conserved element locus uce-3394"
BASE COUNT          265 a          151 c          166 g          279 t
ORIGIN      
        1 aaagtaattt atatttctat ctaatatgtc tgccctaagg gtctaacaaa tacaagtggg
       61 aaaatataat taatatagaa ttataaaacc aactgtgaaa tgtattttct ttatttcctc
      121 atgataactg gggagaaaga aaagcaaagg gtacgactga cattccttgt ttaatgcagc
      181 ttacttagtg actggcataa tgataagtga tggtaattta ccttaaaaac cttaatgagt
      241 ggatcattac tatagagaaa tgggaagaaa actttaatcc cacagaggca gagctccatg
      301 gttggctgtg caataaccag acagaactct gaatgagatt cccaagcttc tgttccctag
      361 ataaaatttt ctctcactcc acttttgcaa aggtaatgag gaggtaatga ggcttgactt
      421 gaattttttc agcacttgat tcccttcatt ccccagcacg ttcccatagg atagagtaag
      481 atgttggatt tatataaaag ctgtgctgat agataggtgg aggaggtgag ccatgctatt
      541 tggttttgga ttctgtctgt atgagaaggg gttcagataa atttcaagtt ctttcagcac
      601 tgtcaattca ctctgatagt ttccacagaa taagacaatt tgacgacatg cagaccttgt
      661 cagggctgtt gactgtttat tttgtcactt tactgatact aaacactgac ctttctgtgc
      721 caccttttct tcctcttccc cctccatttt tcactagctt aatacatgca tctgagtaaa
      781 taataaaacc caaaaaggta ggcagaaatg ttgtattaga tcattagctt aatttgagct
      841 gaaaggtctt tgttgtaagt t
//
LOCUS       KCKM01002526             638 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39653apa ultra-conserved element locus
            uce-7331, sequence.
ACCESSION   KCKM01002526
VERSION     KCKM01002526.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 638)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 638)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..638
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39653apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>638
                     /note="ultra-conserved element locus uce-7331"
BASE COUNT          213 a          124 c          110 g          191 t
ORIGIN      
        1 gttggttgga agcaagggaa agctatcact atagttatta ttacatcata tgattttatt
       61 ctttaattta tcatccacaa acaagatatc tttgagctta accagtttac attcactgca
      121 ttctctgggt ttcagaaaag gaggggttat caaccaatca agagaatatc atgaattgtt
      181 gcagtctctt aagtctttca cagtaaactt aaagtctaaa caataaaaac agataaatag
      241 aggaaatgtc aaactgaatt ctgggtaatg atcagatcag catgctttta tacaatttcc
      301 atcactttga attttaaatc accttttaaa gggcactaaa gcattcttgc aaattagtct
      361 gcactccaat taatgcaccc aacatgacaa taagaccagt ttcagcttgg ctaagcagac
      421 cagtcaacca ggaggatgtg acttgaggac ttggagagcc tgtgcctcca cctttttttc
      481 ctctctcttc acagcagctt aggtccaatt aggccagtta atctgcctaa aaccattgga
      541 aaggaaggat ttctctaata aagatgaagc atagtctgag aggacataca aattaagtct
      601 agtcttttca aaagacggaa aattccaaga tttccctc
//
LOCUS       KCKM01002527            1062 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39682apa ultra-conserved element locus
            uce-6211, sequence.
ACCESSION   KCKM01002527
VERSION     KCKM01002527.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1062)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1062)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1062
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39682apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1062
                     /note="ultra-conserved element locus uce-6211"
BASE COUNT          321 a          171 c          204 g          366 t
ORIGIN      
        1 tttaattttt ttcatatgtg ctaaacattg tagctactga acttcacctg gaatattatt
       61 tgtatgttaa ggagaatgac cttccatctt ttgttatatc tttgggtgtg ttgttttatc
      121 tatataaaat acattttcac agcattttca caatatactt tttggcatat tatgttttgc
      181 acttatttaa atgtgttaaa taagctctga tataaaaaca ctgaactaga gacaagtact
      241 ttttaaatgt tacagagcag taatatctat tgttgacagg aggtgtggta ggagtgtagc
      301 acacactgct tgtgagaatc agtttttgca ttatgtggca taaactgtac cttttatagt
      361 ttcgtatgaa attatggagc tgattgtttt attatatctc agtgtaaatt tttcacccat
      421 ttcagttcaa gtaacattct cacagaacag aggttttgta gtgatatgat gtttcctagc
      481 tgtaggcatg gcctgtccct actgctggct gtaatttact ttttggtctc tgtcgccttg
      541 agcttgcctt ctgactagtt tgttgaatga tgtgctaatc cattatattt ttcagacaag
      601 tgtatcgacc agtataaaca gactggaggg cacaaaccta aatgaaagct atactacctt
      661 gaatcattta aaaagctcct gcagtggtgg cagtgcaaaa taacttttct ctgtacatta
      721 aatataaggg ggaaatttca ataaataaaa taagactgtg ggaagggggt tggaaatgga
      781 agctttgtga acacattatg ctgcttttca catggatgta tttagttata ggaagacgag
      841 acagataatg ttagtcaacc acttgagaat gtgcttctag atgataaatt tgaaactgag
      901 ccccaagccc tgcattactt gctattttcc gttgtccaga cgctctcaca acacatgatc
      961 catgtttgaa gtcatgtacc gtgttgaaac attttgatac aaataaagag tagagaataa
     1021 cctcactatg gaactggcaa aactgagagc aaaagatact ca
//
LOCUS       KCKM01002528             668 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39696apa ultra-conserved element locus
            uce-541, sequence.
ACCESSION   KCKM01002528
VERSION     KCKM01002528.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 668)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 668)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39696apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>668
                     /note="ultra-conserved element locus uce-541"
BASE COUNT          220 a          125 c          137 g          186 t
ORIGIN      
        1 gtaatcctgg gaaattgata ggatagacgc ggcgtatctg aataaaattc ttatcatact
       61 gcagaaatac aaaagcattc ttggaatcgc agagctgcat tatagaatgg ttatttttta
      121 aaagatcctt tattttttca tgggaaaaat gatcaaactg ataagccaag agggaaaagt
      181 tggagcagct gaagtccttt ttggaaaatt tcaggtaaat actatatttg gtcggatctg
      241 gattttccag cgtccaagtg cagtttgtga agtttttagg aaacatttca cttacagaat
      301 atgatccata aatgaccccc ttcaccagcg ttgaacacca gaagtcttgg gcagcattaa
      361 atccaaacat aaccagtaga taggtggaaa atatataaat cagcaaatta cgaacagcct
      421 tcatcctatg tcatttggcc tgcagaagat gaaacgaaat aaaaatgcaa gtagaattct
      481 tcacgcattg aaaaagcaaa ctccttccaa tattcgagcc agctgttgtc aagcttgcag
      541 ttagagcccc tttcagaaag aagggcaggt aatttttatt ttataatgcg agggccggct
      601 ttgctgctgt gtgcacagcg ccatcacgtg gccatcgcaa cggccaagtc ttctatagtc
      661 aaattaaa
//
LOCUS       KCKM01002529             342 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39711apa ultra-conserved element locus
            uce-6736, sequence.
ACCESSION   KCKM01002529
VERSION     KCKM01002529.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 342)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 342)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39711apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>342
                     /note="ultra-conserved element locus uce-6736"
BASE COUNT          121 a           53 c           55 g          113 t
ORIGIN      
        1 gtaaatgcat tattttgagt aacagcaaag caagattaat tttgctcaat gacatatttc
       61 agaatgtctc ttttttttct ctatttattt cttcaaggag tgatttgaaa tatttactac
      121 cagacagtac ctaattttag gttttaagtg ctttaacagc tctatgaaat atgatcagca
      181 gctgcaatat agaagtatgc tgaataaact ctccttataa aaagggagac ctgttttacc
      241 ccgagtgcat aaaatccttg aagaaagaaa aaagataaca cagaaaaaat tagtagttgc
      301 atcccagagc atttgacaaa aatttgagga atttctttct gc
//
LOCUS       KCKM01002530             848 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39726apa ultra-conserved element locus
            uce-211, sequence.
ACCESSION   KCKM01002530
VERSION     KCKM01002530.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 848)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 848)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..848
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39726apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>848
                     /note="ultra-conserved element locus uce-211"
BASE COUNT          272 a          112 c          157 g          307 t
ORIGIN      
        1 ttcagaagta aattgttttc tccagtgaag gcctgtatga tccaaatttg gtcacatttg
       61 ggtcatagct acagaaaatg catatgattt tatatcagaa ttaggtttgg gggaggggaa
      121 aaccccacac atcagcctct gaatcctggt aactctactg agagatacgt atatgtgtaa
      181 attacatgtg tacatataat tatatggtct tgtgtgtgtt tgatttacta gtaaagaatt
      241 tggatcaaag tgatataatg aagaaagcta tatatagctt taaatttttt ttcccattgc
      301 ttatatttgt tcaaactaca gtctcattgc tggataatat ggtaaaaaga ttcattgtaa
      361 gcgttaccta acaacattgg tggtgttgat gaatagttgc aattaataca ttcccttaat
      421 tagtttgata cccagaagat gcacctggca ggtcatttta atactacaat tgatttattg
      481 ctgctagaaa tgattttacc agctatcttc agagagcaca attagagagg atttcatttt
      541 ttttaatgca ttttcactga ggaataaaca taaaaggtct gtgtaattca gaacaaagca
      601 gctataatgt actaatggtt tacggatttt attaatattc agctaatggt agacataatt
      661 ttagagaata gcaacttatt ttctatacaa agtattccat ttttagtatc agagtgcttt
      721 atttaaacta aatcaaaccg tgatatttta aatgagttgt tattatatat gggagatctt
      781 ataaatggtt taacagtgag aatgtatcga tagatgtttg tctgtgctct gtgctgtatg
      841 tgatatgt
//
LOCUS       KCKM01002531             587 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39742apa ultra-conserved element locus
            uce-5228, sequence.
ACCESSION   KCKM01002531
VERSION     KCKM01002531.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 587)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 587)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..587
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39742apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>587
                     /note="ultra-conserved element locus uce-5228"
BASE COUNT          188 a          121 c          121 g          157 t
ORIGIN      
        1 caaaccagca gctaaatcaa gagcagaagg aaggaacctg gtggcaattc catcaaagag
       61 aaatgactga cacaaaccca tctcgctgaa atctcaaggg aagcatggca ggttcgttag
      121 gagtcttgca tcagcgagtt cccattttcc aaagcctgac tgatactgtg aagatgccag
      181 tagcagagtc acagcaatgg tattgacaag gggatttcat ggaggatagt ccaaaacgaa
      241 acccgatggg gaaaaatgga gaaaaataaa aaggcaccaa tataagccac aacatttatg
      301 aatacaatat attttaactc tctacatgga ggaagccaac ctgctccttt ttgatcttct
      361 tctttggcac aacttcagtg gatttctcag actctgagcg ggttcgtatc gatcttctct
      421 gttgcttctt ttctatagaa cctgaaggag gaaaaaggtt tccattattt ggttcctcgg
      481 acttcggagg tacagcaaga tattaaatca acaggtaaag taacgaaacc aagacttttt
      541 cctcttttga acattttatt tttcaaatca gttccaagct atttgcc
//
LOCUS       KCKM01002532            1061 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39758apa ultra-conserved element locus
            uce-1060, sequence.
ACCESSION   KCKM01002532
VERSION     KCKM01002532.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1061)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1061)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1061
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39758apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1061
                     /note="ultra-conserved element locus uce-1060"
BASE COUNT          297 a          182 c          226 g          356 t
ORIGIN      
        1 tatatagtct gtagtatttt aatagcaaat acatgtttga atccttcctt agaaattgtt
       61 ttctcgacaa gtgctctata gcctaaagca ggatccttgg tcttggttgc attttcaagc
      121 ttaaaacagc taaggctgag ctgtactcat gcacaaactg gtatctaggt ggattgcttt
      181 ggcttgtggg ctttggcatt aagcagcagc tcggactgtg tgggctgctg cggcacgcac
      241 tgaagcagca gataagggac atagggctga acaggagcgt ctcgtgaagc ccgagtgcct
      301 gctcttttac tttgggcttg ggcccttgcg caagtgtggg gactgagatt taagtgcgtg
      361 tgtaaactag aattgttgaa agagctgaaa agaacaggta gtctttgctt tccttgactg
      421 tagaatttct gtgggatgca tcttaaagtt tgagtatagt aacaaacttt tcctttcttg
      481 acaggctggt gaaaattgcc cctcaatatt atgacatgag caattttcca cagtgcgaag
      541 caaagagaca gttggatcgc atcattgcca aacttcagtc caaggaatac tcacagtact
      601 gaatttatgc tttgaactga agttactcag aggacagctt taagagatga aagaattcaa
      661 agttcaagtt gtgctcttca ctttggttca ataatggcct ttatttgaaa gctttttaat
      721 ttttctttac agtaaatatt ccattctgat ttcataaatt aaacatttat gcctcccttt
      781 tgtgttgaca ctgtagctca tactggaaaa gctgatcaat gttttgcagt ttattgaaag
      841 tagttctata tataacaatg ttataagcat ttctttagaa atggttgaaa atgcttctaa
      901 aaatgtgatt atcgaccatg gtatgcatga tcgttgtaat tgttgacatt ccttttagaa
      961 gttgtgaaat gttacaactt gtgcttatgt agacacaatc tttggcttca gtacaaaggt
     1021 actgacttca ataaagtcta tttatactaa ttttgtgcca c
//
LOCUS       KCKM01002533            1023 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39774apa ultra-conserved element locus
            uce-3861, sequence.
ACCESSION   KCKM01002533
VERSION     KCKM01002533.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1023)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1023)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1023
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39774apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1023
                     /note="ultra-conserved element locus uce-3861"
BASE COUNT          370 a          235 c          185 g          233 t
ORIGIN      
        1 agtaggaaat ctagctctta caatgtctgt gtacttaaaa tgccacttct cgtgtattaa
       61 aaaaaatcat ttttaggact ggatgcacta taaaacaagc catgaaaaga gcgaagtgtg
      121 agatcaagaa ctttgcccta gccctgatga tgttgacaga ctcttccttc tccctgcgac
      181 acacccgtaa ggagctgtac catttgtttc ataccactgc cattcagcta acatcaaaac
      241 aaaaaagaaa acgaaatcca ccccaaaaag ctaaggatgc ttcaaatgtc ttctgtggac
      301 caatacatcc gtaatgaagc aaatgcacac tcgtcctcct cagaaaatac atggacaaat
      361 gttactcttt caaatggata aagcacacaa agcaccatct gtcaatcttc agaacaaaac
      421 aacgaaacac acactcacac ccccccgcca atggactgct agaagggctg cagtttggag
      481 gcactgttcc ctctagatag gcgtccagcg acggcatcct taccttcggt gggaattcct
      541 gttgctattt acgtggcccc ggcctgtgca gcctggtgta ggacacttaa gaacattttc
      601 atgcatggca agaacttgac aaggagagta agagaaaaca gcagagtatg aaaacaagaa
      661 aaaaaaaatc aaatcccagt atatatgaaa ccattttaaa acaaagcagg attcattaac
      721 aaccagcatt cctcaaaata cacgtgacat agccaataaa gcctgatgag ggacataagt
      781 attgtggccc tatgctcatt aacacagggc aacagtgaaa gttaagaagg tcacagaacc
      841 tatgaacaaa tgcatctctg gtgcaacagt gaagcagaag ccttccaaca tcttcatcat
      901 acaaaagcat tgagcaaaga tcagctcaac tgtaaaaggt gacctagcac cagtccaata
      961 caaaaataca aactagaaaa aatctttcag gaaatgtatg tattcataat acatagcttt
     1021 ata
//
LOCUS       KCKM01002534            1008 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39789apa ultra-conserved element locus
            uce-6474, sequence.
ACCESSION   KCKM01002534
VERSION     KCKM01002534.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1008)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1008)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1008
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39789apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1008
                     /note="ultra-conserved element locus uce-6474"
BASE COUNT          264 a          205 c          247 g          292 t
ORIGIN      
        1 cgagaaacaa ctttaatcct tgttagaaaa actgcagagt ctgggcctga caaagagctc
       61 atgcccggcg cattgtgagc gctgggagcg gggcgagggg agccctttac agctgcgtgc
      121 ctccagcccg cctcagctgg actatttagg cgaggaggtt tgtcaattcc tcccgacaat
      181 ggggcgagtt tttcagtgcc tgtagccgcg ccgagccccg ttggggatca atgctggcca
      241 ttcaagctgc accctctttc attgctttgg tttgttaatt taagactaaa ggtccactga
      301 gggggtttag ggtgtttaag aaagctgatg aactgtttaa gaaatctgat gaactgagag
      361 cgtttatagc cctggtgtgg caactattgg cactgaggga gctgtgtcct tgttgaccct
      421 cttgttatta aaaatgcaca agtgctgcgc ttctcaatat ttcaacactc tttcattgtc
      481 aataccacct tctgagccct tcagcttgtt gcttgctcta aagatcttct tagattgggt
      541 ttgaaaactt caccttaaac actagattag actgatgttc tgttttccgt gctcctgttg
      601 atttgttgaa ccttcccagg gctggaaagc aagtagcagc ttggtgggga gaccggctgc
      661 taatatgatt taccagtcta cagtcatgca caataagtgt gaataaatac aggggtctca
      721 cagagtcaag cctagccttt ccttttctct tattttttac tttaaaagag gtatctcagc
      781 aaaatgaagt gagtaatgca tgcccttaca ggagctggat gagctatgaa taagaagaga
      841 gggggaaata tggaggcaaa catatttttg ttaaagtggt tggccgctgt tatgtgctga
      901 tgtgaaaaaa aaagtataat aaacacttac tgttgtattc ccatgtagac gacagcaaag
      961 aatatgtcac taataccaca taattgacat gtgcaagagg tgcattgt
//
LOCUS       KCKM01002535            1097 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39804apa ultra-conserved element locus
            uce-4642, sequence.
ACCESSION   KCKM01002535
VERSION     KCKM01002535.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1097)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1097)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1097
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39804apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1097
                     /note="ultra-conserved element locus uce-4642"
BASE COUNT          274 a          257 c          285 g          281 t
ORIGIN      
        1 aggagtctgg gaggggggct agcaaactgg agcctcaggg acactagctc tgtctggaaa
       61 aacagagtac tgagctccct gtgactgcag atgtgtcatc gctgctagtg gcttggtggc
      121 ccaggctgcc ttgccaaaaa ctgagagcac agttgcctaa ggagcatcgt taattcaatc
      181 ttagaacgtt ctctatttgt ccaagatatc ttgtttatcc tgtgttattt catctctgag
      241 agcctcttcc atgacggctt gaaggacacc ttaattaaca gcagcagtaa tggctggcag
      301 ggaggtagca gcatatgcct cctttcctgc cctgccattt cttcggtcaa ggaagtcact
      361 tgcgctttct ttcatcattc ctcctcctcc tctctccctc ccctgtgtcc cgactccctg
      421 ccctgatcca agagcttgaa ggtctgctgg tggtagccgt ggtggctgca gggaggaggg
      481 aatgggggaa aaagcggagg gagtaaaata agtgtcaagg aattcattgt ctgttctcca
      541 cctgttgtta ttctggtccc aatcaacctg ctagccaggc tggagccagt ggccatctgg
      601 aaacactgct ctgtttataa acttggcatg aagcagcact cccgggccct gacctcccac
      661 acaaatctgg aaacaattag agcaagatga taggcaggca ggcagggaga ggaggggaga
      721 gaaaaagagc gcgtgagaga ggaggctgca gagaagggaa aaaacagaca gagtggaggg
      781 gagtgtggag aaggtggcaa atgtttctga gatgcaaata tttatgccca ccttaaatga
      841 ctgctggctc attaattatt gcccttgcca aaacaacttt tttccatcaa ggctaaggca
      901 tgcctctttg cctcccccag caacacaggt tttccaaatt atattttatg ttttatgctg
      961 ctaaaagttt gcctttacgg ctctgaggaa agtaagatgg gtctgttagg tccacacact
     1021 gagacccata catgttctgt acttggttat aggggagtcc aaatgttgca gctcccgccc
     1081 atctctacta ggagtaa
//
LOCUS       KCKM01002536             827 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39819apa ultra-conserved element locus
            uce-6265, sequence.
ACCESSION   KCKM01002536
VERSION     KCKM01002536.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 827)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 827)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..827
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39819apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>827
                     /note="ultra-conserved element locus uce-6265"
BASE COUNT          276 a          134 c          144 g          273 t
ORIGIN      
        1 ctgaattgct tttattttct tatactttca gtatatacaa tagaccaaag agcaaaatct
       61 attttaaagt ggacacaatc ttactgttaa gagttatgtc attaaattgt aggtctccac
      121 aaagacatga ttctagcttt cacaaagctg agatgctgtt gtccagcaga agactttatg
      181 gaaagctgca gtaaaatcta attcagagac ctgctcttga aatgccacgt tcaagagaca
      241 tattggagca ctgagagaaa atgacctatg ttcggaaaac ttggacaaaa agaacacaaa
      301 ctgtctacat ggcaccttta ttcctctgta cttagattga ctttctcgta ctaaaatcat
      361 tttcagtttt aaccagttaa acatgcctct tctacagttc catttttgat agttaaagtt
      421 ggataataca gtatttgcaa agagcatgtt tggtcatctg tggcctatgt ctcatctgat
      481 acaccattta gcaccagaaa gcaaattaaa gagaaaacaa aagtaacact tgtttgaaag
      541 agatcattaa atgtattttg aaaagcctaa agttatatat ttaacagttt ttatatgttg
      601 tatatttgta gaaaatccta tttaacaatt aacgtgataa ctctgacagt catgacaagt
      661 ggttcagagt taagttgtgt tttattactt cagttgtctc tgaagtgact ggtgtcgttt
      721 gctttcttcc attgggacat tctggatgta aagcatgacc agagaggact gtgtagaaaa
      781 agcaaagaat aatgttgttt atattacata aatacattca accattg
//
LOCUS       KCKM01002537             432 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39834apa ultra-conserved element locus
            uce-3788, sequence.
ACCESSION   KCKM01002537
VERSION     KCKM01002537.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 432)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 432)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39834apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>432
                     /note="ultra-conserved element locus uce-3788"
BASE COUNT          141 a           71 c           80 g          140 t
ORIGIN      
        1 tattggtgat cttcctacat aagttaaggg ggaaaatact taaaaggatt agttgagaac
       61 gtcaggtctt ttcctctgag tttttttact agaacaggag acagttaact tctgaaaagc
      121 atcaagactg atgattttgt ctatatagca ttgacctgga agctcaacca ttcagactta
      181 taaatcaggc aatttatatt taatcattaa ctaactcccg agctgaacag ctgttcaaaa
      241 ttagaaatgg gtcaccccgg ccaggatgac attacaggca atctataatg cattagaata
      301 aaattatagt gatttttaac tgtctggaaa tttattacac tgcatgttcc aactcttaaa
      361 cccttgttag ccaatgtcac tagtgattta tggtgcttgg gtggtatggt aaaattactg
      421 aagatttaaa ta
//
LOCUS       KCKM01002538             863 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39850apa ultra-conserved element locus
            uce-1565, sequence.
ACCESSION   KCKM01002538
VERSION     KCKM01002538.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 863)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 863)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..863
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39850apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>863
                     /note="ultra-conserved element locus uce-1565"
BASE COUNT          268 a          197 c          142 g          256 t
ORIGIN      
        1 ctgaccataa atacgagaat aatgcagcgg ggtcacagct ctgaactagc tgtataaata
       61 cagtatgatt agtaacgtct aagagtacat tcatcactta attacttttt ccattatgcc
      121 tgcacatttt atctaatcag aaagtaagcc tgcttgcttt caccttgcag ggttaaacta
      181 ataagagcgc gctgcttcga accccctcaa aattacatat aacatgcgat ctcgcctcag
      241 ccgccgccca ttaattctgc aacgtatttg gcaaatgaat tttaaatgcg agggaaaaca
      301 tttcgtacgg tttcgaggcg gcttccctcc cctccaaaaa aaaagccggc cggttaatta
      361 gcatacctcc cgtgctcgtt atgaagtcat gggctaatct gacatacttg gttattaacg
      421 tgctcctgac tgaatcaatc tggcaataaa tttccctacc actcttccta acagctctcc
      481 ctttatattc cgatagttct atgacaataa ttgattgtga ttcactcctg aaatgtacca
      541 atcccgggga aatggcatgg gctttcattc atcaatttca gcttcataag tggaaattta
      601 tacaaggtat gcagatgttt agagtttggg gtaatcaata aggagtaaat aaagattggc
      661 attcactata ctccacttga caagctccag cctaatgttt gtcaagcaaa ttaaacacac
      721 tcagactttt cacctgctcc tacaacagca ccacatatgg ctctgaagtt aaaaataaga
      781 aaatgtgcat acattatcat acataatgta caactccctc catttaatat gcaaattttg
      841 taaaatatta ctgaatacct tct
//
LOCUS       KCKM01002539             214 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39865apa ultra-conserved element locus
            uce-5920, sequence.
ACCESSION   KCKM01002539
VERSION     KCKM01002539.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 214)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 214)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39865apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>214
                     /note="ultra-conserved element locus uce-5920"
BASE COUNT           54 a           36 c           40 g           84 t
ORIGIN      
        1 aaatattaaa acaaaaaaag ccgccgtttt tgagtaagat gtctgcatat tttgcttttt
       61 tttttttttt atttcccttt ttgatggttt agcgtttagg gcccttcact tgactcactc
      121 tttccatggt aactatacac aatgctggcg atggtacgag ttggcggtaa gtgaaacaaa
      181 agcgctagag aagaagcttt tttctttttt ttct
//
LOCUS       KCKM01002540             832 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39879apa ultra-conserved element locus
            uce-7994, sequence.
ACCESSION   KCKM01002540
VERSION     KCKM01002540.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 832)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 832)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..832
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39879apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>832
                     /note="ultra-conserved element locus uce-7994"
BASE COUNT          239 a          140 c          189 g          264 t
ORIGIN      
        1 actgaaagtt ccttgacatt cgatctgttt ggcaacatat atttgacaca taacatatct
       61 ggcaagtgag gcaaggaaat tcttccaaca gtcaaaagtc acaagttatg aacaggaagg
      121 aaaatgttta tttggaaaaa ttaatatact ctctgaatcc aattactctg caataggcat
      181 tgtaagggag aagagtgtca ctgtggattt tatagagaag acagatattt tggcacagaa
      241 gagttttcag ttttgtttgc tgaatggggg gaagtattag ctgctagtca ttttacatca
      301 agttaaatgt ttttttaaga agtgccacag tctgaagtag tacctaagtc attacctgct
      361 ttccagtggc gcattactgc caaggaccca gctgtcctgc agctggactg actcaggtgt
      421 ggtttgcagc tcggcgggca aagcagccgg cggggccgga ctctggttcc tcctatttgt
      481 cagtgagttt ctgttaagtg aggtgatgga tgggtgatgc tgtgctgaat gttgcttgtg
      541 agaaggtggc aaaggctgca gggtcgactg gccttggtta tttggaggtt gttctaagaa
      601 gaaagaaaat taaagtttgt tatacaccat tccagcattt gctacaacca aagcagagcg
      661 agaaattcaa tataatgcta tcatctaata tatttgcata ttattctatt accagacatt
      721 cagtgacatt ctctaagagc aagtttaccc ttgacacacc aagttctaat taatatacaa
      781 cagatggtaa aattgctttt ggttttaatt tgtttctttt ttttttaatc tg
//
LOCUS       KCKM01002541             445 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39895apa ultra-conserved element locus
            uce-5165, sequence.
ACCESSION   KCKM01002541
VERSION     KCKM01002541.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 445)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 445)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39895apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>445
                     /note="ultra-conserved element locus uce-5165"
BASE COUNT          138 a           90 c           92 g          125 t
ORIGIN      
        1 gctagggaag gaaagcagga tctggtatta gtccttttag tcgtcaggaa attacaaaat
       61 gtacacttgc ggagtaagca attttcgcag tctgctggca catccatctt tttaatgagc
      121 cttgtttata acctgacgcc atgtttctag tcacctaccc tgtttacatc tttggcccct
      181 ttaattaaga gaagaaccag ttaaaagaaa gtaagaagaa atattaatat gatctgatta
      241 attcagctag cgggaggtta tggggtacca aggttattat aacctataaa ggcaacacga
      301 gcaaagctgt gttcatttgt aattttatta ggcagagcaa attagtgagc ccacatggca
      361 atgacaaaag accccttcct attttctctt accccccacc gaaagggcca ggcgcctaaa
      421 gttaggctcc atattaggca aatga
//
LOCUS       KCKM01002542            1026 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39909apa ultra-conserved element locus
            uce-891, sequence.
ACCESSION   KCKM01002542
VERSION     KCKM01002542.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1026)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1026)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1026
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39909apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1026
                     /note="ultra-conserved element locus uce-891"
BASE COUNT          305 a          193 c          233 g          295 t
ORIGIN      
        1 ttgttgacgt aatgagaata atccatttct tgtgctttga attggacaaa atcaaataca
       61 tatggaaaat aagatttctc tttgattccc tccataaagg gttttggaca atgaaaatgt
      121 gtttgttccc atgtagtcat ggacacagct gttttattga ggtgacagaa caggagaaag
      181 gtagcaagaa aagcccattc ttattggaga accactttta ttttgcttat tcccttgtaa
      241 ggaggggata catatgtttt atgtggtcct ggatactaag ccatccacac aaatatgaaa
      301 tgattaaatg gagcagcaat aaacagtggc ctgtaagtat tgcctggtga gagataatac
      361 tgtagctctc taattggctc tctaccagca tacagtgtga ctgatttcaa ctgtagcatt
      421 accagtcttg cttccaccag cactattatc tcagagtgac acttccatta ctctgaacgg
      481 agaaagatga acgtcacctg tcaggggctg gttaattgtg ttgctagatg tatgttacca
      541 gggcgcaggt tggacattta tgaacataac tgcttcctct gatgtccacc atccttcaac
      601 aatcgataca gctcttacag taagcgcata attgagtgaa ggcacttacc actgaggggc
      661 tgaagatgag cccgttgcgc gagtttcatt gtccatacat tcagcacaaa tgagctgata
      721 tctgcccttt attgtgtgtt gctttgtgga aatagaaact aatgtgccac tttcatttgt
      781 tttctagata aatggccaag atgtccagaa tcgggaagag gcagtagcat tgctctccag
      841 cgaagaatgc aagaaaattg tgttgctggt cgcaagaccg gagatgcagg ttagagtaaa
      901 tagatgcact gagccagaac ccaagttata ctgtacgttt ggtgtcgctg taagtaatga
      961 actgctgaga aacaggaatg ccaaagttcc tgacaaaagg aggaaacaga taattgcaga
     1021 gctttc
//
LOCUS       KCKM01002543             754 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39925apa ultra-conserved element locus
            uce-3824, sequence.
ACCESSION   KCKM01002543
VERSION     KCKM01002543.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 754)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 754)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..754
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39925apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>754
                     /note="ultra-conserved element locus uce-3824"
BASE COUNT          167 a          203 c          213 g          171 t
ORIGIN      
        1 tttttttcaa atatatatat tttatgtatc caggtatgtg agagaaagag aatatttaac
       61 ccgctgtata ccgcttccac ccataaagga gatatcctct ccttaaggag cggcagcagg
      121 caggcagagc ccgagaatcc aggacgcagc tcgcccgcag ccggcgcggt ccccgctctc
      181 tcccgcagct ccgagcggcc atcgccgccc tcccaacccc cgttctcaga ggacgctgcg
      241 gcaaagggtg cctgtgaatt tctccgtggc tcggtcacag ggcagagatt gcctgcgaca
      301 ggtaaatagg ctgcgggtcg cagtaatgcc aagagtattt tcagttaata ggagagggaa
      361 aatgaggtgt ctgggagcga tattggaaag tacaagatcg atgatccgtc ctcgtgtcca
      421 atcagcagcc tttaattgac tgtattttct aggtaattga gccgctgtgc ttctaaattg
      481 aagtggaaga tctaacaata catctcactg ggaggaatta ctcattactt cataatgaaa
      541 ttttcctttt gctgcgtggg gccggtgcca ttaacgcctt cgccgccggt gggggtgacc
      601 gcgacgcaac tcagggctgc ggctccgggc acgcgtgggg catcgcgagc ggcgggggca
      661 gactcgggca tccagcctgc agcaggctct acctctggtc tcgggccact gccaccagac
      721 aggcaggctt ttctgtcctc gccctgacag ggga
//
LOCUS       KCKM01002544            1028 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39941apa ultra-conserved element locus
            uce-6910, sequence.
ACCESSION   KCKM01002544
VERSION     KCKM01002544.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1028)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1028)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1028
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39941apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1028
                     /note="ultra-conserved element locus uce-6910"
BASE COUNT          326 a          182 c          206 g          314 t
ORIGIN      
        1 taaccactga gatttaaaac acaacattta ggttttgccc tggagaagag ctagacttag
       61 cagtaacata acaacttctt tttactttta tgatgtaagt gtgaacataa ataaaacatt
      121 ctgttttccc acaaactcat ctattttttc ctaccatatg catttgtcaa atttttggtt
      181 ctaccaatat tattcatgga acagttgtga aatattcaag tttgttttgg agttttgact
      241 ttcttgcaga aaatacagaa ataacctcta ggatgagacc tattttccat actctatcaa
      301 taatagctaa tcagaaatgt gtgtacgata taagggtcaa gagttaatga gatttattaa
      361 aatgcaggga agtaaaaagt gtgataatcc tacacaataa gggactgcaa agagggaggt
      421 gacgagttaa cgggaggcac tgtgaatatt tggaagacaa ccttccttta aatgagacac
      481 tgctggtaac ggtaatgggg aatttgcaat gaagggaagg acatgcaatt ataatctggc
      541 tgggccccac tggacaaaaa gtgatttact tgaaagctgc ctttgcactc agtaaatgtt
      601 cctgttatgg gctgctcagc ctgtgacagc tttccagatg tcaatcaaat tatcatctat
      661 ttacagttga tttggtagtg tcatttgcaa tattccctac gtttctgatg aaattggaag
      721 cacagaattt tctccagttt gccctggcac tcgagtgggc aaactgctct ttgcaaatgt
      781 catgtgtccg cttatcagca ctctaaggag agcgatcttc cattcggctg agtgaatcgc
      841 taccagatgc aaatctctca atcgtcaggg gaagagtatg gcaaatttta atgtactttg
      901 agaaactcag tttacatcag tgctcaaggt gcggctttac ccaggctaac agtttttgta
      961 taacaatgag cctaaattaa agactgaaaa acaaggaaaa tgttttaact ccttcatgta
     1021 aaagaaaa
//
LOCUS       KCKM01002545             754 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39956apa ultra-conserved element locus
            uce-1769, sequence.
ACCESSION   KCKM01002545
VERSION     KCKM01002545.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 754)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 754)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..754
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39956apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>754
                     /note="ultra-conserved element locus uce-1769"
BASE COUNT          228 a          129 c          149 g          248 t
ORIGIN      
        1 ttcatctgag cgtagttgag ttttatagat ctatttatga gatccgatac tgtaatgatg
       61 taattttact tgtctaataa atgtagctgt acaagcaaag gatagcaaac atttccattg
      121 tgaccaaaat cctttaaact gcagccactt tgatcttaga gctcatgcta tttaataaat
      181 gctggctatt cttctaacaa tcacaattat ttaaagggtt ttcaaaaggg atagggcaaa
      241 tcaaataaaa caattactgt tgtatctcat tctgaagtta agtgtatttt ttatgtgggt
      301 cttgtttagt gtctcctccc agttttcatc cattatcaca ataattgagt ttgtagctgg
      361 aattaaattt atcaaattgt gttatcctct tttgaaattg gataggtatc ctggcagtgg
      421 gagctagaag ttaatctgct ttgctaaagc ctccagtggc acagcggcaa caggattgag
      481 aaggctcaaa cattttcctg tcaccctgga cacgatgtaa tttctcctca atcccttgtg
      541 caaataatga catttgaatc gagcattaac aggcttaatt actttaaaat tgtcatttta
      601 atttacactg atatagtatt gatcatacaa gcagagatta agctgttcac tggagcagat
      661 gatggggaat taaacattaa agggtcctcg tggggctgag aggccgccca gagagtgcca
      721 gaagaggaat gatatttctc cgtaatgaac tggc
//
LOCUS       KCKM01002546             775 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39972apa ultra-conserved element locus
            uce-2516, sequence.
ACCESSION   KCKM01002546
VERSION     KCKM01002546.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 775)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 775)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..775
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39972apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>775
                     /note="ultra-conserved element locus uce-2516"
BASE COUNT          214 a          156 c          155 g          250 t
ORIGIN      
        1 gtctcattgc cattgtttct ctcaagtcca atgacacaaa agcatgctct gctcactcct
       61 gggcttgggt gctcagagca agcgctctgt gacaggccac tctcagctgc tcccggtccc
      121 taataattag cctgctatgg cagctacctc ttgtggattt gcctgtgaga gacatttgac
      181 atagcagaca tcagagggat ttttcaggag gctcttgtgg cgtccgaatg gctcttaatt
      241 aaccacttag gtatcctcgt tcactctcct gcttggcact ttccaaatgg taggggttgc
      301 actgtggatc taaacaccgg ggaagcatgc tatcaaaaga tcttgtaaat gaaggcttgt
      361 gtaaattatt tttaatgatt ccctcctggc acatcattat gtttgtagtt acacacaggc
      421 acttcagaga tggctcatct tccgtaaggt cagctgcagg accaccataa ctagctgcag
      481 tcagtaaatg gcttattaat tagcacagtg attttacatt gctaagagct ctgatgtatg
      541 gagctagaat tgtaattgtg taggatcgaa ataataagcc atctcagggc tccttatgca
      601 aattgccata ttataaaatc attacctatc taaacactga gttttaataa gaattacaat
      661 gatgaatttt atgataattg acactcaaat tttaatctct tggattttta tcattttagt
      721 ggttaaagtg tatttctaat taaatattgc ttaaaatgca aaggattttt taacg
//
LOCUS       KCKM01002547            1127 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 39987apa ultra-conserved element locus
            uce-5676, sequence.
ACCESSION   KCKM01002547
VERSION     KCKM01002547.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1127)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1127)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1127
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39987apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1127
                     /note="ultra-conserved element locus uce-5676"
BASE COUNT          322 a          216 c          254 g          335 t
ORIGIN      
        1 acaggcgcac gcactgtaca ttaatctctc ttgccttatc tgttgctgtc tttaatttgt
       61 atgcttcaaa attgagtggt gaggtcattt attagactgt ttctgtgagt tttatgtagt
      121 gataagaaag cagtaacatg caatttgttt ttatagaact cacttttgta agtatgatct
      181 aatattttgt ttctttaact gaacagggag ggagaagagc tttcagagct aactaagagt
      241 taactggcta catttcaact gtcactattg tcatacatct acacagggag tgaaaatgtt
      301 tatgagtaga aatttctcct tggaagcctc agagcaaatc tttccagttt gtcttgattt
      361 tttctttccc tattttttaa acgcaacctg tggtggaaac gattgttatt atccaaagga
      421 ccttacttgc tggctggctg catctctgtt tatgaaatgc cataacaaaa gtgagctcct
      481 gcttgtgtgc ttccaatgcg tgatgttcct gtgtgccaga tgggcacttt catgactgta
      541 tgagcgtgga ttatttcatt tcctacatct gggactccaa atggctgcac agaatgccac
      601 aggagagagg cacagatctt cagctgggga aacctacctt cacaggggaa ccagctacat
      661 cagaggggat gaggcagaga atccccgagt gatatctgaa agttcacatt aaccaaggcc
      721 ataagggaaa cctttagaac caggaacaag acaaaaataa acaataacta atgctggatg
      781 tcagctgtgg agagcgggga gggaaaataa accatgagca gtttctggtc tggccacaga
      841 agatgtgttt ggaatgctca ggaatttcag ctcagaaatt ctgctatgac cttcagatat
      901 caccgggtat tacaagttct acagatagcc agagagaaat atcctaagga gagctggcat
      961 attccatgcc atcctagtta atgttgactg cgtattgctc acagcccatt ccagaactgt
     1021 gaccaggcag ccttgtaaaa acactgcaga atgctacagt aacagtcagg aatgctacag
     1081 tttgtcataa agctgttgca ggttttggga tgatgacttg tttgttt
//
LOCUS       KCKM01002548             531 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40002apa ultra-conserved element locus
            uce-1786, sequence.
ACCESSION   KCKM01002548
VERSION     KCKM01002548.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 531)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 531)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40002apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>531
                     /note="ultra-conserved element locus uce-1786"
BASE COUNT          182 a           99 c          101 g          149 t
ORIGIN      
        1 gatgatggga aacaccctaa tgtctattgt ctaagcattt ctattgacta gccagggcaa
       61 aattagtatc agcagcgttt acattgttct ataaatggcc tgagcaaaat ctcataacac
      121 atccatggtg tagtcagaac tcatctgttg tttgcacttc ctactctgca gatgagacaa
      181 tctcaaaaga caggttaggc tgaagactgg ttggacaact ctataagtga agtctcaaga
      241 ctcttgtcat tctagctgtc taaattactt aaacaggact cagagggatt taaaggggag
      301 aaattacatg acaaacaatt atattctaac acactattta taacaatgcc ctttcagatt
      361 attgttccac tcagactgac acattactgt aatcccaggg atgaatcaag ggacttagag
      421 ttagatcgtg cacagcttgt aggcataaaa aaaatacgaa taaagaactg acattcagaa
      481 aatatagagc gactcaagga taaattctgc tgggatgagc ttaatttatc a
//
LOCUS       KCKM01002549             627 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40018apa ultra-conserved element locus
            uce-6399, sequence.
ACCESSION   KCKM01002549
VERSION     KCKM01002549.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 627)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 627)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40018apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>627
                     /note="ultra-conserved element locus uce-6399"
BASE COUNT          209 a          126 c          122 g          170 t
ORIGIN      
        1 tagtgtttag acaccaacaa cacatcttca cacacaggag cctaatcaga ttgagatctt
       61 atcagggaat taaagaaaat aaaaaaagaa ggaaagaaaa agaagagaga cacggagcta
      121 gatatcacca actgagtttt tgataacaaa aagacattgc tcagttcttg aattaacctt
      181 tgtgtcctag acacactatt gtttactctt tccctttttt gttctatgcc ttctggaaaa
      241 ggacacccac acactgtggc agcagctgct cctattaatt taaagctatt acaaaaatta
      301 aaattaaacc caattacttt ggctggttta tagccgggga acggcttagt ctgattgttc
      361 cctctggtta tggacaaaaa caatattcct acctacaggc agctgccact ggaatactaa
      421 tgcatcgagg gcctggcagg aacagattca gaatgcagag tctaactgca tttcttacta
      481 gagaaaaata tctcatcatg gatctgcaga aatgcaccaa cttcttccac cgtaagtcac
      541 aatgaagctg atctgtagtt agggggagga aagcgaaatg atggtagaaa gcttaatgct
      601 cagatttgtc attttgcatt tccaggc
//
LOCUS       KCKM01002550             959 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40033apa ultra-conserved element locus
            uce-3821, sequence.
ACCESSION   KCKM01002550
VERSION     KCKM01002550.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 959)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 959)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..959
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40033apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>959
                     /note="ultra-conserved element locus uce-3821"
BASE COUNT          295 a          166 c          220 g          278 t
ORIGIN      
        1 gggaaaaaca atgggttaaa tattgccaat atttactgtg aattcacaag ttataccatt
       61 gaaaactgta cctcagaata agcgaaaaat ggcactagcc acagacctgt atgttgctag
      121 cagtatttta aacaaatctt ttcaaactct accaactatt tgcttttaat gcatttggaa
      181 cagacattta ttgattttat tttcatttat tttaagcagt gtctgataaa ctgtagctga
      241 gcatatacct gtgcaacaac ttagtattat tttcctatta tcaaatctgc tatgccagtg
      301 aaactgttgc aaaacatact ttcagactgt gaacacagaa aacttttaat ggaatacttg
      361 tctgtatact tgtcagacaa gtttgaattc ttttcccctt tgacaacctg tttgaacaaa
      421 atggaggagg aaaaaggaag cataattaca tgagaagtgg cagcagtgtt ggttaaggtg
      481 gtgccatctg acacagcaga catctggctc aaggttgggg aaggtgtttc agagcagtca
      541 gtagtatcat agctacaagt ctgcagctca tctagaatgg ccgtggagga ctcactcact
      601 gtgcgggagg agcactcact catggcagaa tctgcgctta cagaggctgt ttcgttcctg
      661 tggataacac tttcagaacc tgggtatggg catttatatg aaaattgtga aagggctggg
      721 gttttataaa agcgtgaggg caaaaaatca tcaagcgttg gcaaagaata tggtactaga
      781 tgggtgccac tgtctggcga gtaaaaggct ctgttaactg gtaccacagg agaaggaaga
      841 ggcagtggag aagcttctgt tgctgtttgt ctgtgtgtct gtgaagcatt tacctccatc
      901 acagggacag ttactttctg gtttccaagc tgagatttga gggaaaaaaa aataagaaa
//
LOCUS       KCKM01002551             231 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40048apa ultra-conserved element locus
            uce-5239, sequence.
ACCESSION   KCKM01002551
VERSION     KCKM01002551.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 231)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 231)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40048apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>231
                     /note="ultra-conserved element locus uce-5239"
BASE COUNT           61 a           49 c           34 g           87 t
ORIGIN      
        1 agttgtataa tgtaatcatt tagtgtttat tttattatgt gtaccttcta ctcagagggt
       61 tggcattatt gttcctaaca gtgatggata caagcagatc atgccctatg acctctacca
      121 cccccttcct cggtatgtaa acagtcaacc agatactggg attaacaaat acatttgctt
      181 attttttttc tcttctctgc atttctgctt tgttctcaaa ctaaactaac a
//
LOCUS       KCKM01002552             934 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40062apa ultra-conserved element locus
            uce-7545, sequence.
ACCESSION   KCKM01002552
VERSION     KCKM01002552.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 934)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 934)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..934
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40062apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>934
                     /note="ultra-conserved element locus uce-7545"
BASE COUNT          295 a          197 c          160 g          282 t
ORIGIN      
        1 ttataatatt tattagaaag gctagttgat gaaggcagta gtttcctacc acatgcaata
       61 aaacccactt cacatgcatg aaaaactact gtatcaaatt tcaggctata aataagacaa
      121 ttgtaaaatg taaatgctta gaaacactag caaaattcag ccaacaaagc aaggatcaga
      181 aatttatacc ctcgttactg gtaattacgg tcacattctt tactgaactg tattcccagc
      241 caacacataa aagtgtcctg atgcattacc tgcttagaac taagtcaccc ctaacacaca
      301 tgtgccagaa agcgaatctg cagctatgtg gccatgttag cacatggagc tctgcatgtg
      361 ctgctgtaaa tgtatctgtc taccttttaa gcaaagtagc tgaaagcccc tcagggtctt
      421 cttacgaaat gtaaattcac tgacttggag acctcagcat aaaatcgctg cctttagtgg
      481 atggcagttt aacacactcc tttccataag gaagtgagga aaaataaatg cagtttcaat
      541 ggctgttttt aagtacattt gacatttgtc ttttttcttc ttctttgacc agtttaggca
      601 tctataaaag taccttttcc ccctccagaa ataagcaata aattcttaat gcccttgtga
      661 ctgatcaatc tcaacctgtc aataattcat atttgatact tccactattt aagttaagac
      721 agaattgtga ggaaaggtga gccgcctttt gggttcagat tgacacctcc tgccaagact
      781 gttaatatgc ctaaaaaatc ccaaagcgca catgtgggaa ctgaaattct tcagtggtct
      841 tcttgcaggt cttttgacaa tactgcatga atcacgtgct ttttctttaa agggtgcaca
      901 aacacacttg attcatgtgt cttaacaaat ccaa
//
LOCUS       KCKM01002553            1005 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40077apa ultra-conserved element locus
            uce-6535, sequence.
ACCESSION   KCKM01002553
VERSION     KCKM01002553.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1005)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1005)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1005
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40077apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1005
                     /note="ultra-conserved element locus uce-6535"
BASE COUNT          345 a          163 c          170 g          327 t
ORIGIN      
        1 caagtttaaa gtaagaaatg caaagtgctt tgttatcaat ggtgtatgct aaaataacag
       61 gtggggaaat aacatccgtg gaaattttat catctttaac tttatgttgt aaattattct
      121 cctgccaaac ctcttcattg atgcaaaatt taaagtgtac agcctatgaa atctgtaaag
      181 tttttcagga ggcaaaagaa cccacaaaac actgaagagt atttctggtt gtgtacattc
      241 aggattgttt gtgcagttct agacaaacag taaaaccaaa atcctttata aaaattcttt
      301 gaccctgctt tttgccgtct gagtggtcat ggttgattgg aaaatcaatg aagtgctgtg
      361 agaactgcac ctcactgttg cagaaaagcc acacaaaaat ccaacttttc acatgagatg
      421 aagattgcct ttggttcatt tactctctta agacacatta aaatcaaatc tatcacccca
      481 tttggccatc tgtcaattct cactacacag taaacgagta gactttgttc cttgatcacc
      541 agaattggag gatgttttgt tgttgtaata aatggttgta ggcctcagag acagaaataa
      601 atcaatgcaa tttataaagt tgaggtgaaa atgttagatt cagttttcta aactacagag
      661 aattatgtat ggatgacttg caataaataa agcacagctg tagcagctta caaaaataaa
      721 taatgaagat gaaagaaatt aatgtgtagt cctttctttt taaacctttt aaaacattga
      781 ataaatacaa gagtaagttg catatgaatg gtgcaactat ctatacattt gattttaaat
      841 attcaggcaa taaataagag ttcatttact tctcctctta cttaaaactt aggtttctga
      901 gtacaaaatg cactaacaac gaggagtacg tttcctactg cttactcagt aattgttctg
      961 ctatttatct cctgaagaat tattttctag aactgagtat aaatt
//
LOCUS       KCKM01002554             761 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40092apa ultra-conserved element locus
            uce-4199, sequence.
ACCESSION   KCKM01002554
VERSION     KCKM01002554.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 761)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 761)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..761
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40092apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>761
                     /note="ultra-conserved element locus uce-4199"
BASE COUNT          194 a          176 c          174 g          217 t
ORIGIN      
        1 ataacaacaa gcagcgagga tagtaatagc ataataataa ttcaagtcaa cctttcgctg
       61 tgcccgggca tcctccaccg agagcggtag gaggaggaag aatcgcacta gcagcctggt
      121 ttgaatttgg ttcgaaccat tttgaatata tttagcccca gctttcccct cttgaattcg
      181 aggctgtccc aagtttcaaa gtgaccgaaa agtgacactg tgtgcatttt gtttcatatt
      241 aatcttacac attgacagtc tttgttaaat aacaaggcgt gcccttcacc aggcgacatt
      301 ttcatatttg ttagacgcgg tgacctgaag ttcacctcgg ccttggactt agtttttcta
      361 aaaggtctat aacagtgtct tttagatagc ggggtgcttt gcccaggtca ctacttctaa
      421 agcaaaatta agaaaaaatc gcgggaaaat gtaaacgtta tggtatgtat cgactgtatt
      481 ccctcctttg ttcctgggaa tgatacagcc cctggcgctg ctcctgcctc cgcgagcggg
      541 agcgctcctc tcctatggtc gctgccggag caatgttcgc agttttgcac caagttcagc
      601 attagttaaa agcggtgact tcactggcac cgaggctcct cttaacaacg ggatggttga
      661 cgggatttgc tcgctctgtc ctggcgcggt taaacaaaca cacgtaaaaa gtgatttgtg
      721 cctggatttt aaatgaatgg tcttttgagc aaaccttcct c
//
LOCUS       KCKM01002555             569 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40107apa ultra-conserved element locus
            uce-499, sequence.
ACCESSION   KCKM01002555
VERSION     KCKM01002555.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 569)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 569)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40107apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>569
                     /note="ultra-conserved element locus uce-499"
BASE COUNT          172 a           99 c          105 g          193 t
ORIGIN      
        1 agaaaataga tcggctgctt gtctgcaccg tttgcgtaag atgcagcgag gagcagatca
       61 gatcattttt tttttttctt taaaggtgta agatactgag atgctgaacg cgtatctttc
      121 ttctgtgatg gcttggagtt aaaaaccacg tagatcttga tatgcaacct aaatttggca
      181 tcaggaaatg ggaaattgca tctttaagca gagtacaatc aaaaatgaat tacaataaat
      241 cctatataat tgcataggtc attctcttta atgagatttt attaacctga ctgtcaagct
      301 tttgagtcag gcagatattt tatcttcttc aactgataaa agtgtcagct ataaaccacc
      361 atataaatat tcataaatct acacatctgt ggcagcctat cagcatcatt cttttggaca
      421 ttaaaagcat tctaattact ttctgtctag cagagctgaa atgctgcctg ttatagtatg
      481 tgcttggcag gcatgattgc ttttgtttgc catcacaaat agcagcatcc tattttatat
      541 actgatggtc cagaatatat tcagggttt
//
LOCUS       KCKM01002556             722 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40123apa ultra-conserved element locus
            uce-5418, sequence.
ACCESSION   KCKM01002556
VERSION     KCKM01002556.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 722)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 722)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..722
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40123apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>722
                     /note="ultra-conserved element locus uce-5418"
BASE COUNT          204 a          141 c          146 g          231 t
ORIGIN      
        1 tagtgctaca gtctcaacat ccagttttct tcacttcaca gtttaagttc ttatgctgct
       61 ctgatgcatc ggtcaagctg ttctccagaa cctggaactt aaactgagaa ctgttaacaa
      121 ccctagagtt tttcctgagc tatttgaagc tttgcctctt ataactacca ctcagctgca
      181 gaggtggtag gaatgtgtag cagctgcaat aatgcaagct aagcaaggtt acttttagct
      241 tcattatctt catgtcttct taaaaaaggg gaatgcaaag ttattcaatg tccaaagcat
      301 tgtattgtca tggtctataa atgtgtttgc tggctgcata ctgtactttc tttatctgac
      361 cttgctcatt cgaagatgca cttgttatag tatgtcagtc actaatgagg cctcaagtaa
      421 ttgtgcctga ttgaactggc aagatgcttc ctaattataa tgataaatgg aattgtctga
      481 tcagctatgg agggtgaatg gtgtggagaa cattaaaaca aggtcactct gtgaaggaga
      541 accacttttt aaattgtttc cttcctttcc caccatcctc cgaatttaga ctcttcatcc
      601 cattacatag tcaagcactc agtgtttaac tctaaaggga cagtttaggg caatggcact
      661 gtagacgagt ccatcagtga tactaaaaga catatgatga ggggataacg gatattatag
      721 gt
//
LOCUS       KCKM01002557             896 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40138apa ultra-conserved element locus
            uce-3187, sequence.
ACCESSION   KCKM01002557
VERSION     KCKM01002557.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 896)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 896)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..896
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40138apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>896
                     /note="ultra-conserved element locus uce-3187"
BASE COUNT          296 a          147 c          164 g          289 t
ORIGIN      
        1 tgggtagatg ggacttgttt tagaaggagg gggaaaaaaa accataattc aaatcagctt
       61 cgtttcattc atttagatat cttctagatt tgtagctttg gatgaataat gagataagag
      121 ttttgtttag taaaactagg gtcactatag tgtagaataa aaacatcaaa atttatttca
      181 tgtctgacac aagacaaata tcaagccaaa aatcttttat tttacagaac taaatctgaa
      241 gttgtatgtg aaagggaaaa ggaaatagag aaagaagcta aaagaaataa aaaaaagtgt
      301 gtgtggggag aaaggcaatg ctaaaactgc agtcttagcc ttctaaaccc ttttgcgtct
      361 ctgattgata cttttcaatt ataccttccc atttcactga catttgaaat gctatttttt
      421 ttctagcgat aacttcaaat gcttaagttc caacagcacc agtaaccctg tttagctgta
      481 gtagtaaatt ggttccttgt acaacataat ggcagtgaca gccttttgct agggaaatga
      541 gttctccaat gggacatgcc tatgataaga cgtccggttt tgaaattgta tttctctgta
      601 tcagaattaa atctggactt tatatttctt tgctgccact gctctgtagc tggtccctat
      661 acagtacgac caaagactga caagtaatgc ttacacagga accctttcac ttaaattgga
      721 tttgtccttt tatgtttcct cctattatta gctattaaaa tctctcaaac ccttttttaa
      781 acagtgatag ggtttggcaa acctgaaact cactgagtcg gaggaggaaa aaaaaaagaa
      841 ttgtagtatt aagagcagta atttctttcc ctaggtaaaa ttaactcaca tttagt
//
LOCUS       KCKM01002558             863 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40152apa ultra-conserved element locus
            uce-2928, sequence.
ACCESSION   KCKM01002558
VERSION     KCKM01002558.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 863)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 863)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..863
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40152apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>863
                     /note="ultra-conserved element locus uce-2928"
BASE COUNT          333 a          165 c          118 g          247 t
ORIGIN      
        1 taaccatgac atttaaaaga tgctaaggca attttcaatg acaattttaa ctagcccttc
       61 aaagatacgt attctctagt aatagtaaaa aacctgttta tatcagtttt tctaagcaac
      121 aaaataaccc aaagttatgg agaacagtac aaagagttca atgcaattat ttgctatggc
      181 attatcatgt cagtttttaa tttctccaag ttggatgcaa tgaaaaatta tcttgatata
      241 acctttaaca agaggtctaa acactagaaa acgttgaaat cataatacag aataagccac
      301 caaaagcaca agtctttact cctcaactct ttccaacagt tccaaaattc aggcacacat
      361 ccagaagaac tttctgcccc acgtatggtc agtaaagaaa ttgaggttaa cctttaattt
      421 ttaatgtcac ctgcagccag tgactgcttt ttctaatgca agtgacagat aaacagcaaa
      481 acactcccaa gatgatacac aaagcaccac acaccataag tgcattttta tttttatacc
      541 aactcaattt ctcaaatgga taaccaatgt tcctactaat ttacattaag aattgagtga
      601 ggcatgaaaa ttgttctgat gcataggctc taatgtactg catagtttct gtactttact
      661 gcaatgctgg aaaaaaacta actacgctta aaaggtacag aaactataca tacaaaaaca
      721 caagcacata tatgtcttac aaaatcactt cagaaagggt tataaattat ccagagcagt
      781 atgaagaaaa aataactaat caaagtcacc gatgtaaatc agtaaaagca aaaaattctt
      841 cctattaaaa tgaatttcct gac
//
LOCUS       KCKM01002559             934 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40167apa ultra-conserved element locus
            uce-6258, sequence.
ACCESSION   KCKM01002559
VERSION     KCKM01002559.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 934)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 934)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..934
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40167apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>934
                     /note="ultra-conserved element locus uce-6258"
BASE COUNT          253 a          216 c          210 g          255 t
ORIGIN      
        1 tttaggggca gccaggggca aggaggagcg gacagtcgcc ctccgactcc cacgctccag
       61 gggagacaaa aactttggct cttcaagaaa cttcacagcc ccctccactc gcctctctgg
      121 caaggctgct cgccccgtgg ggacaccagg acctatcgcc aagtgccacc tcgccttccc
      181 tgagcggggc cagcctacag gcaggagcca cgggaaacag cccgggatct ggctccgggg
      241 agtgccattt cttgtctggc tggtgccttt atagggatag agacagagat tattttttca
      301 ccgttttact tcaataaaga catcctgagg cattatttac aagcgcacat aatttaccta
      361 tgctatttgg caaagcaact tcggaaaaga aagtgaatga ataaatactt cataactgct
      421 ggtagaacag actggctcct gtaatgaaga aaagatttat gtcacgttat tccagcccaa
      481 atagcagcag cctctgtttg tctcagccca gtgcttctat ttaaatgtta ctttcatata
      541 ttatgtggca ttaatttaac tatagctcat taaggcagaa tgaaatggtt aaattaactt
      601 atcaacccat aatgatgatg aatgaggtat taattcagat acaagctggg caatttgcaa
      661 gtttacgcat tctgatggtt ctcaaataac attttgaata gcgggtcagc gcctcaatca
      721 attacataag catgtaaagt cggtctctcg gaaaaaaatc ctttttcatg catatgcatt
      781 aaaacatgtt cgcaattatc ctcggaaatt gccttcattg gattaagcag cagtcttgga
      841 cgccggttct ggtcttccct gtgcttttat taaagctgtg agcggcgttg gctgcagcag
      901 ccgaggcacg gtgtttgttt aaacagtgtt tacc
//
LOCUS       KCKM01002560             973 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40182apa ultra-conserved element locus
            uce-1344, sequence.
ACCESSION   KCKM01002560
VERSION     KCKM01002560.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 973)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 973)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..973
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40182apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>973
                     /note="ultra-conserved element locus uce-1344"
BASE COUNT          294 a          209 c          157 g          313 t
ORIGIN      
        1 aaaaaaaaag tttacccata tgctccgtaa agattaaacc tggaacctga tagaactgca
       61 cagtcacctt cttttgttag cacttcttgt ccatgttgaa ctgcaaagaa aaaaaggtgg
      121 aaagcaagcc tgctacagat gtgactagct atgaatattc atgaatgcca ttgctcctcc
      181 ttttctactg gcatccaagc cattctgatc tccgtctccc tctttttttt ctcttctctt
      241 ttccattccc tttccttcct cgagactgaa caagactgca gttttatttc agttacagcc
      301 tagtacgata cagttatcag cagcctcaga agccttttat ttccattaaa aaaaaaacaa
      361 aggaaaaaag aaaaaaattg taattatcca cagttttatg aatccacctc cccttaatgt
      421 tcattattta aaccagcagc aattacaagt tcaaaggggt ttagagggcc agcaacccgc
      481 ataatcactg ccaaattaag cgggactcat tcgtcacaga agagtacact ctgagcagtg
      541 aatcatgcat gcagtgacag gcactgattt acataaagac gaaatctgtg ccctctaggg
      601 ctgagcatta ctttatctca gtggccctgt gatatatgca ttttcttttg gtgttagaag
      661 gttcagagac tgatcctgtc taatacatga tattttattc tcgctagcat cactaacact
      721 gttgctagtt catgtatatg tgtatttaac taacaataat ccaaacttca aggcacttga
      781 gattttaaaa gcaaagtttt ggcaagaaac cgcttttcta atctgttaca atacttctga
      841 gcctcttgaa ttcctttttt tttggcataa ccaatttgca ggtcaaacac tcattcttga
      901 aaaagattac tttgattctt ctcctgctgc gttgagtcaa tatagtaatt tttaagacat
      961 tgtaaatact tgt
//
LOCUS       KCKM01002561             858 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40197apa ultra-conserved element locus
            uce-5129, sequence.
ACCESSION   KCKM01002561
VERSION     KCKM01002561.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 858)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 858)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..858
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40197apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>858
                     /note="ultra-conserved element locus uce-5129"
BASE COUNT          205 a          195 c          215 g          243 t
ORIGIN      
        1 caattagtct ggccagcagg aatcggccat tgaggcgaat ttgcagcaaa gttacactgt
       61 gtgtcccgcc tctctctggt acagctctaa ttgagtcgaa taattaatta aatatctaaa
      121 gctcgattag cctattctgc atcgcacttt gaaaagttct gttttcttga gcgacatttg
      181 gccttttgaa gaacaaaaaa ttggaaatgc taatgttttt cagccaacta agggaagaaa
      241 ataaaaatgt ctccatagca acaaagctgc tttctagatg gtttcctaag atatgcctga
      301 accagaagca gatgtctgat ttgagaatct cgcctccttc aatgtaaaca aataacttct
      361 aggcaggtgt tggaaataat atggaaatcc tattaagggg ccctgggttc ctgtcactca
      421 ggaagcccct gccacaaaag ggttggttgt ctgaataaag gaggcagagt aaattctcgt
      481 taggctttag cttttcccag gaaatgattg tctctgcatg ctctttctcc tgcgagcctg
      541 aatgcaagcc gtttcttcta ttgatcccct ctgccaccct cactttctcc cgctcctctc
      601 ttgctggatt agcgcctgat gtcagtggtg gccgctgctg ctgctgcctg gggcgttgtg
      661 gcatttgtga tgttaacccc caaccggagg agacacccga cgcgacagcc tggagcgagg
      721 agtgcagggg aagcggtcga tgggggaggc ggagccctcg gaggcttggt tgctctggct
      781 cgtttgtgtg aatttataga tgatgttgta gccttggcac tgcgagacca agcgtcgtct
      841 ggacaggatt ttcctttt
//
LOCUS       KCKM01002562             823 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40213apa ultra-conserved element locus
            uce-1836, sequence.
ACCESSION   KCKM01002562
VERSION     KCKM01002562.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 823)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 823)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..823
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40213apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>823
                     /note="ultra-conserved element locus uce-1836"
BASE COUNT          275 a          157 c          113 g          278 t
ORIGIN      
        1 ccgattcttg ccatttctta atcctacaaa ataaaaacac ttctttcacg taataatatt
       61 atctaacgtc tttgaaactc ttcagagatt ttcacctgag aatcaaaaag tgttaaaact
      121 cctgcctctt ttaactctct tttacaaaag atgcatggat gtaaaaaccc cagaagaaca
      181 cagcacttgc catctcctct ggttgtaaag aacatgaaag agtaaccaga catttttatt
      241 caaatgaaat tatacaaatt tttttctttt tttttttctt cagcatgtaa aaaccccacc
      301 ctataatgaa cacaagctta aagcaatctc ttccaatgga ccattttact tattccacaa
      361 tttcttaccc aaattacaca ggtataatta ttttgacact gtaatgaaaa gaaaatggga
      421 tttgggcact gtgggtttat ctaataacac tatttcttgc cagacttcac agcactgaca
      481 atcacaaaga gccctgtcca ttccaatagg aaatatttga ttttactgta ggaacattat
      541 ttattttcac caacttgcta ttatcagaaa ggatatgata gctgaataat aaaaatgaaa
      601 tcaagaaatt ctggtgtttc aaggctttat ttttttctgc tctcactttt gacattttct
      661 tcccctggag agacaagata aagtgctgtc ataaatgggt gacttttctt gtcaaatgac
      721 agatttgatt ctccatggca accacaaatc aaggtgctag tctgaattaa agcttctctt
      781 aaaaggcgtc tttatgttta taaaatgaat ttaaattaaa tgg
//
LOCUS       KCKM01002563             873 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40228apa ultra-conserved element locus
            uce-5076, sequence.
ACCESSION   KCKM01002563
VERSION     KCKM01002563.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 873)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 873)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..873
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40228apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>873
                     /note="ultra-conserved element locus uce-5076"
BASE COUNT          280 a          149 c          158 g          286 t
ORIGIN      
        1 aaataagctg cttttagcat ggggagaaaa tctaccatac agtttatgat taagtagtac
       61 tgaataacaa gaagtatttg tgtacttcca gtaaaaacgc attaggaaac taaatggatt
      121 tttgactgta ttgtgtccct attacaaaca aattaataat gatatcgttc ttatagccta
      181 cctgaaaatg tgattaatgt tcagtattac atatgctagt gtgttttggc aatgtgaaaa
      241 cctgaatgct taacaggaac acagtttcaa attaaagtaa taaatcagag ttactgaagt
      301 aaggcctgca gtatgccaca ctccgcgatg ggcatcgaga gcatggtatt ttgtcccacg
      361 tttttgccgg aaaaagcttc tttatcagct actgtctttc tagtcacgct tgtgttcacg
      421 tctttgctac atgctctgct gattaccttg gaaaagggca ttgctgtaac tgttcaactg
      481 acctttcagt ttattttctc ttgtgtaata tgaaacatga gctaacacag tcctagtcta
      541 ctgattttga gaaagaaatc tgcctctaca cttctgcagc tttctgctga aatatgatgg
      601 agtttctctg tacctatgtt aattccaaaa gaatttcagc ttgttctgga tatcatcaca
      661 actggagaag caaattatta tagctaaaag agggttttta gtgtacagtt cgtgaataat
      721 aagactactt accagaggga tagtgagact gactactaaa tgaagaaatc tcatgcctaa
      781 aatgtttatc cgatgaatgt tcagatgtgc aaaacaaaat aaattaagta tactgctgtt
      841 attttttttc cttatataca aaaaaaacct aca
//
LOCUS       KCKM01002564            1035 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40244apa ultra-conserved element locus
            uce-1910, sequence.
ACCESSION   KCKM01002564
VERSION     KCKM01002564.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1035)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1035)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40244apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1035
                     /note="ultra-conserved element locus uce-1910"
BASE COUNT          290 a          244 c          239 g          262 t
ORIGIN      
        1 tgtctaccga aacgatctac cttatgcaag ctgtattgaa tgctgacaga atatctcgct
       61 tctatcttca aagaaaggaa gtgattattc aaaacgtgat ttccctattc cctcccggca
      121 taggtgacac atctctgcgg ccagacgatc gaggtttttt tttcctttct aaagccgtgt
      181 ttccaaggat aaaatcttac ttgcaaagat ccttattaca tgtgcgtacc cttaagctgc
      241 tgagatgaca ccaccactta caggtggtgg agtgaaagca agcaaaagca ccaaacccct
      301 aaagtctcaa gtcactgcaa tcatcttcaa ctcccaaatt gtcctggaag gagaatagca
      361 tcggatttgt cttaggctgt ttggccaaac tggggcacag atgggataat gacttttaca
      421 aacagcattt tgatgagagg aggggagaag gaatcatatg taaaatgcac aaaggctgca
      481 taaacacact gatgcctgca gctggaacaa actaaaaaga tgtttaataa tttagaacca
      541 agcaggcagg gcctgtgcag ctgttgtgtg caggggacca tgaaagtctt ccatttgaca
      601 gctggctcca tctttcccca gttgctacgt gaagaagcga atgcagattt gggattagcc
      661 aatccctgtt acccctgccc atctgccacc aagaccccca gctccggctc ctctcgccgg
      721 agaagcgcag acataaaaaa gtccacactc tcccaaacat atgtatgcat cagtatcagc
      781 cgtcagccgt tcggaggatc tgttgacatg ccgccagtac atggctgctg tcgtttttgc
      841 tgcagggcac attttgcatt tcacacattt gcagaaatac aaaatgctgt tggatgcaaa
      901 caattcaggg cctaattggc tgaattactt caatgttacc ttgtgtcccc cacctgatta
      961 acatagctca gctgggaggg ctgggaagga aggagcagag agggatttgg agggcaggtg
     1021 aagctgtgtt tgccc
//
LOCUS       KCKM01002565             893 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40259apa ultra-conserved element locus
            uce-208, sequence.
ACCESSION   KCKM01002565
VERSION     KCKM01002565.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 893)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 893)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..893
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40259apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>893
                     /note="ultra-conserved element locus uce-208"
BASE COUNT          244 a          212 c          159 g          278 t
ORIGIN      
        1 taggtctttc agcaatggga tttaacattc tgacctaaca tttaatgtat taatcctaat
       61 tttatgctgc tactaagact ctctgctgta ttaaatcaac ctaggttaat tccaaattag
      121 atctctccca cccactatca ataggtccac tgtttggttg cccagaactg accacccact
      181 tttatgagaa tctgtagcga attagaaaat ctgtcattgc tggaggagcc ggagagctag
      241 gatatggcct gtcattcctt ccatacaata cacacccttt gtctgctatc tcttaaacta
      301 acctgacata acttagcctc ccagtcaatg gtatctttat tctctcccca ggaatgtttc
      361 gttcaccagc tttattaaga aatttctgga caatgtttag tggctgcgca atcatccaag
      421 gttctattaa aaagccatct gggtaattaa tagcacattt gttctcagcc tcctcccaat
      481 ttgtccatta gtggaataaa agcacaggac aaagggtaat gtggttcagt tatattttac
      541 aagaattctt caggaagttg aaaacacatg atagttttcc aaagatgcat atgtttacgg
      601 gcaccctacg agagaggcaa aactgcacaa actgggggct cttcctcagg cttctcccct
      661 gttaatagag gattgactct tcattgcatc ctgtctctcg ttgacgctct ccagcctgag
      721 gtggagaggg tgtgtgaatg ttctccttca tctcaactca gttacagctg ataacactga
      781 ttccaagatc cccatcaggg caccacatca aaaccggcac acataacttt tatactctct
      841 caccagatat ctgaaggctt ttctgaggtt cctttttaat gtcttctctt gaa
//
LOCUS       KCKM01002566             958 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40274apa ultra-conserved element locus
            uce-598, sequence.
ACCESSION   KCKM01002566
VERSION     KCKM01002566.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 958)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 958)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..958
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40274apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>958
                     /note="ultra-conserved element locus uce-598"
BASE COUNT          296 a          201 c          164 g          297 t
ORIGIN      
        1 atgccccaaa taatccacca ttcctataat gcttagattt gcatatttag gttagaaatg
       61 cctggcatca ctggattaag atttccccct ggttatacaa tgttttgtca tgaattctac
      121 gccagagacc acactcattc ttaaaccaga catgtctaca caatgaaaac ctgagtggga
      181 gcacgttcgc aaaacattct tgccactgct cgcctccata gctgaaatgt gtttggaagt
      241 ttccttttac tctccttaaa ccggaccata aagagtgaca aatgcaaagc tcctctctgt
      301 agccgccccc atgataacag acgacaagat gcagcacaag cttcatctcc tgctaattaa
      361 acgaatcaat taagagacta ttgttgcaac tgtgtaactg ctgttctata gtggcaataa
      421 caaccccacg gggaggtctt ttactacatt aaaatgctgt cctccacaac tccatttgat
      481 attattagaa acagttattt gcgtcttgct gtcatattag tagcaaaggc aaattatgga
      541 aatatgcaga ccagaatggt cccagtatga gatcaggttt ggttttcagc ctccaaggga
      601 acaattgctg aaattccaaa gttccctaaa gttctttaat ggaactgata aatctatcag
      661 cacagcatcc atttagattc taggtaaggg tcacatattt gcatactttc ctgctaagct
      721 gatacaattc aactagataa attatcatat taagtttacc ctcctgagtt aaactgatgg
      781 agttcaaaat tgttttcgat ggttgtcatt aatcgctgtt acatcctaaa tgctcacttt
      841 gaaatctaat tgtgctggtg taccaagggt catattaata gcatttttaa tgttaaatct
      901 ttgtaaaaca tgtttatttt actgatattg ccactgaagc ctagaagact aatgaaaa
//
LOCUS       KCKM01002567             688 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40290apa ultra-conserved element locus
            uce-4956, sequence.
ACCESSION   KCKM01002567
VERSION     KCKM01002567.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 688)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 688)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..688
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40290apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>688
                     /note="ultra-conserved element locus uce-4956"
BASE COUNT          208 a          110 c          146 g          224 t
ORIGIN      
        1 tttaatggtg agcacaatca ctctgtagtg attgttttca gtgctgcttt attaagttat
       61 gtaatggcaa gagttcaaac tccagagatt gttgaaatgg tagatttaga gactacatta
      121 ggatgcttgt cagtaacaag tatataggct tttgaagtgc agagattttt acctagatac
      181 tactgcagct tgcgattttt atttaaatag tttggaggtt ttagacttaa taccctgctt
      241 ttaaaaaatg ttttaaaatc ttgttttatt ccccaaagat ttgttttctg ctgttgcgat
      301 tagatgatga cagctagctg gcttttaaaa ttgatcagga agtattctgg cagtcattca
      361 gtgttgtaat agcactttaa tggatatgag ctattcaccc agatcagact caatgtcaaa
      421 acaggcgaaa atacagctgt cactctggac aagaagttac acatatgcaa gcagctgcta
      481 ataatagtgg aaaggaaacc ttataataat gctttaaagg tgcatgcatg tacgtgcaca
      541 catagtgctt ctgcgcctgt agatgcctcc taaaaaacac gccagagaca ttattttatg
      601 gctatgtgtg taaaaaggga aaagggaaac acactgacct gtgaggaagt tgtgataagt
      661 tcatttgctg gtgtgctcct agcttctt
//
LOCUS       KCKM01002568            1007 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40306apa ultra-conserved element locus
            uce-2710, sequence.
ACCESSION   KCKM01002568
VERSION     KCKM01002568.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1007)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1007)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1007
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40306apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1007
                     /note="ultra-conserved element locus uce-2710"
BASE COUNT          332 a          157 c          191 g          327 t
ORIGIN      
        1 atattatatt attcactgct tgttttaaaa ttctggagag tattttggga aatggtggtg
       61 gtgtttgtca gtctagattc atgttactgt gttgtagata ttaatttaga aaaataacac
      121 aaaactagga acacttcatg ctgcaacatg gaagttagtg catagatttt tttagagaga
      181 acatttaaaa ctctacattt cataatgttt aatactcagt aattttaagt gggtcccttt
      241 tcctagcatt tgccaatgat aattttcatt aagaggtgtg aaggttattt gttgtttgaa
      301 ataatgttta cacccttctg ccacagtaga gagtgaaaga aggatctgtc cttcagtctg
      361 ttcatggtat acttgaaaaa aaaaagtata aacactgaat tcctgagctt gctgtgagat
      421 ggaaggtcat taacagggca cttgagcaga ttggtattac agtcaattga gacgctgaaa
      481 catcctaaat ggcctaatgc agcaactaag tgcttcttaa attccagaac ttttacttga
      541 gcagagcatt catgaccaaa atgaatttcc atttcctttc gtaaatgctg tttttatata
      601 gtcatagttg aagaggcaac acagtgtaaa cacagcagtt tgattctatc tccacagcag
      661 cgctaatctg tcaagttata aacacgaaat ctgagtctga gctaaatata tatggttaca
      721 cattgaatta atagaaatgg caggagtttg tgtgttaata tacacataca ccatcaatgt
      781 agccctgtca gactaatcat catgaaaatt agaatggttt caccccttgg gaagctgaag
      841 ttttaagtgt ccaatcaatt cagcattata gaaaggataa attagattcc acttaacttc
      901 tttatgttct tggagtaaat tcaccagtaa aaaagaagtg ataacaacag acaagactga
      961 aggtttcaga atgctagcat tctgttggac aatactgtat gtagttg
//
LOCUS       KCKM01002569            1079 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40321apa ultra-conserved element locus
            uce-6396, sequence.
ACCESSION   KCKM01002569
VERSION     KCKM01002569.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1079)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1079)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1079
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40321apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1079
                     /note="ultra-conserved element locus uce-6396"
BASE COUNT          299 a          212 c          235 g          333 t
ORIGIN      
        1 atgcgtttag gatgataatt gtatggggtt tgtttggctg atggttcatt tttaaatagt
       61 gtcatgtgca tctttaatgt cttctgagaa ccttggtgac aaatatcgac actaggctgt
      121 gctttaatac tgtcagattt ttaatttcag aaagtgtaaa cattgccaag ttttgaaggt
      181 ctgaaccaag gataccgaca taattttcga aggcatgggt aatacctcag cacctccctt
      241 caatataaaa cccagaggtc tgacacaagc aaacctctct ataagccact tcatgcatag
      301 caattctgtc acacatcctg agtattcgtg aatccatacg ccgaactgtg ttttctatat
      361 gaggttcagg tgatgtattt tattgctgat gctgtttcac ctgcatttag ttccagtgac
      421 atggaaaaca gtgcagccaa ttgtccttat tacagtccct gtgtatttct ccccagtgca
      481 cttgcacagg gggaagatgt gagcatggag tgtacttaac tgccgggctg aatggctctg
      541 taatgtagct tcagcatggc ataaattaag ctgtcatttt tttggcagca agtgcagaga
      601 ggcgattttc ctgtactgta acatttgaaa caacaatttt ctggctccag tagtaactga
      661 cagttccgtg tgatacatgc tcaacatttg tgcttcaggg gctgcagctg gaaaaaacct
      721 tcagggtaag gtattgtctt tattagcaaa tcgagcttgc agttgcagaa cactaacatt
      781 tcctaactct tttcaaagag cctgtcactc acaccctaaa aaaaatctag ttaaaattta
      841 ctaggttcca tctaggtatt taacggtgtt gcttatatgc aaaatgctat ttttgataat
      901 gacttcagac cttcattagg aagattgctt acccggagag agctagccac tggcatttta
      961 cttgtgacac gtaccaagat gatggcttga aggacagcca ggcttggaaa tgatcttgga
     1021 atacttggcc agattcaggc tggtgaagaa caaggatgct catgaggtgc tgacgatac
//
LOCUS       KCKM01002570             980 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40337apa ultra-conserved element locus
            uce-7637, sequence.
ACCESSION   KCKM01002570
VERSION     KCKM01002570.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 980)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 980)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..980
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40337apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>980
                     /note="ultra-conserved element locus uce-7637"
BASE COUNT          235 a          205 c          244 g          296 t
ORIGIN      
        1 atgaggatgg ggatgggagg gatggggatg ggaaaaaaca agggtttgat tggcacgtgg
       61 tgattttgga caaaagggag taggtgcctc tgctctccag cccccgcata ctgctcagtc
      121 cgtgtgtttt gagagggaag agaagctgat attgttccct ctaaaattaa ttcctagtta
      181 gccagttgct cctggttttt agctcagagc acactgtaat tgcatttttc atttcagtaa
      241 ttatagagga tattaaagtg gatagacagt tgtagcaatc tggttcttta gacatatcca
      301 cttgtccaag atcaaatggc tacagcatat ttagggttac agtctccttc ttttccttct
      361 tgttctctac tgcagtggat ttttttttca ctgttaccat ggcaacacta tatctggctg
      421 ccagctctgt cgtaagttat tgaactgaga ctggcttttg gtttagcaga taattaggtt
      481 ctgtctcaca ggttcatttt cctgtgactg ggacgtgaat atgacctaca gctggcctca
      541 atttcagtgt cacagacaaa actttaaccc ttcccagtct cacccctgct gtacccatcg
      601 tggtggttgg tggcaattgt gaaccctttc ccgggggtct gagacacagt acaccctcgt
      661 gagtcctcgg ggctcattgc ccaacctgtg ctaatcccca gtgaggaggg agacagcctg
      721 gcttgcattc gcacgctggg cgggcggggg gaaagaatat tgccagcacc agatgcatat
      781 tgattgtctg ctatgtagat ttgtcggaaa ggtaagttca ctgcttgatt agtgaccctt
      841 taaataatag aaatgcaaag ggtggtggca ggcatttttt tgcttgactc aggagtatga
      901 aatatttatg agaagtctgt tttagcacac aggaccccat cttcgtctag caaagctata
      961 aggaaccacc cgtgtcgttt
//
LOCUS       KCKM01002571            1017 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40353apa ultra-conserved element locus
            uce-5598, sequence.
ACCESSION   KCKM01002571
VERSION     KCKM01002571.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1017)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1017)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1017
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40353apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1017
                     /note="ultra-conserved element locus uce-5598"
BASE COUNT          283 a          215 c          225 g          294 t
ORIGIN      
        1 ttttttccct cccatttcct ccacaaaaga aagaacaaaa tagagcggaa tagagaattt
       61 tagccatgca caagttcagt gaaaagacac gttttagcta taagaaccag cttgttgcca
      121 atttccgtca aaataattcc ccaggttaaa tcctggtcct attgaagtca ttgtccaaat
      181 actcactggc tgcaaaggga gatcaggatt tgtcccattc aattcattag tgatggtatg
      241 aaccccaagt agtattacgc ttcctttaaa gaaagagaag ctcctactta ctgtttatat
      301 actaacgtta tttctcacac gtttattgtg ttactctcct taatttggtg ccacgctggg
      361 tccctgtggg atgccactca aacattatgt caatgatctc aaaattgaac tccagtgctt
      421 tattttacaa atggcttcta gcagatgtgt ggcacacttt attaacttaa gtacccatta
      481 gttgaaaatt tcattagttt gggggaaagg gatcagtttc gtcaatagat ctggtatggg
      541 tggacccttt gtgtcaacct gacccatatc aaaatggatt attgttgtaa gtgagacaag
      601 tgacctaatg ttctgcctat tatgcacaca tgatctataa ccttttaaaa tactagtgtg
      661 ggaaaggagc acacttcact gcatccccaa accatggatt cttaacaggt ggcagtccct
      721 ctcttagcaa cgtttgccat gggctgtctg cgcgagcgta tgaattatca gggggtacag
      781 tttccaacca ggtaaccagg ggaaaactgg gatggagaat gaatccggaa taatgaacgg
      841 cccagcagac gttttaatga gtgcagaagg cagctgatgg ccctgggtct gtagtgccat
      901 cgtctgactg accggtgcat ttcgaccgag gcactttgcg tgctgcctgc atcttctggg
      961 ctaataaagc ctcagaggtg aagctggatg cggttacagc agtagcatat ggtacgt
//
LOCUS       KCKM01002572             507 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40369apa ultra-conserved element locus
            uce-3832, sequence.
ACCESSION   KCKM01002572
VERSION     KCKM01002572.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 507)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 507)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40369apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>507
                     /note="ultra-conserved element locus uce-3832"
BASE COUNT          151 a          103 c           89 g          164 t
ORIGIN      
        1 cccattcata tgtcccagag ctgttgtaat cttccctgct aatgctgatc taagagcatg
       61 gacattattc tatttcttga cacatttaaa gttctctaat gaataaagca aacagcttat
      121 ggctgcttgg actgtcactc gattgccccg gagggcttta atgtctttaa aataggcctc
      181 ctagtttctc tttaactacc ttgtctacag aggtctgagg ggtagagcag atcaaagatg
      241 tgctggaaac ataaaaagca gctgtccttc atttaccttt aattagctac atctgaccag
      301 attctttatg gcctctttgt cacaaattca acagtctata agccttctga tttgtcctta
      361 aggactgtat cattataaga gcttcaacaa aatgcaaatt taaaatatta aatgcaggac
      421 tttggaaaaa atccttgtta tcactatgga aatcttacct ggggcaatat tattttggat
      481 gtatctgcaa aagcgacaaa ctgctca
//
LOCUS       KCKM01002573             790 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40383apa ultra-conserved element locus
            uce-4851, sequence.
ACCESSION   KCKM01002573
VERSION     KCKM01002573.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 790)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 790)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..790
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40383apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>790
                     /note="ultra-conserved element locus uce-4851"
BASE COUNT          207 a          158 c          191 g          234 t
ORIGIN      
        1 ttgtggcctc caagcgacga ccctttaacg agtgaaatgc cggggccgag caccatcctc
       61 agtcggaatt tgctaaatgc agttcaaagg cgatcaatac cttgtgcagg gagagctgtg
      121 ggtttttttt tcttttttcc ccaacgtttt ttgctaaaca aacgccttat cagggagtta
      181 gtttattcac agattgccac aagcgttaat gaccgcccga gtcttgttct gccagtcacc
      241 cagctggctg ttgataaaga tttagcatca tgttccgagt gtcagggctg tcagtagcgc
      301 tgaaccgttt gaccagaaga aaaaacgcac agggagctat tgattacagc ttctcagtgt
      361 cacttgttca ccaggattta ggtattgatg aggctgcgag tgaaaacaag ctctttccct
      421 tgtggggctc tacccagaag aacaaaagcg aagttggaga aaatattcag ctggtgcccg
      481 aatcagaggg actctggtat tgatccaagg gccccttcgt gttatttttg ttggagacaa
      541 atctgccggt ttggaagttt ttctagtgtt gtaagtgatg ggtttgtgta tcagacgaat
      601 tagatttcac agcgtgaaga tttcagcgga gctataatat tatgagctgc ttggttattg
      661 ataaaaatta cattaaatgg agctgaggca ttaaagctcc agactagggt agcactccct
      721 ctaaaatgtc cttagggccc taataaattt tagcagcttt aattatttta gtagtctgaa
      781 agttgtcacc
//
LOCUS       KCKM01002574            1015 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40398apa ultra-conserved element locus
            uce-681, sequence.
ACCESSION   KCKM01002574
VERSION     KCKM01002574.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1015)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1015)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1015
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40398apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1015
                     /note="ultra-conserved element locus uce-681"
BASE COUNT          338 a          218 c          163 g          296 t
ORIGIN      
        1 gatgtccaaa gggaattgca aatcatccag ttcttagtat aacttgttca gtactttctt
       61 cctgaagaat tttgagttac ctgtatagat gtgcaatata aaccacgtta actacataaa
      121 actttgccac cacatttcag cacaacccat gtaactaaaa gtaccagcac cacaacaaac
      181 acacaagttt taagaagcag tccaccacaa aaatcatata tccttcacac tttgtgctat
      241 atcacttttt tcctgggaac agaaattgtt tatcttgttt catccacgtc tattgtctcc
      301 actgattact ggaatcacat ttctagggta aacaaggtga acactccccc ctccttccca
      361 ctgtcccatt ttctgtcaga aaggtttgag gcaaagaagg cctcccaata agttttctaa
      421 tccagataag cagggctagg atatctgaca gctgtttcac gctcttcatc atcatctgaa
      481 acaatcagta cgcattagag agtacttttc cctttacaaa ggtgataatt agataacaag
      541 ctgagattaa agtaattaca gttagacagc tggcaaggca gcacagtcat gttgaaatat
      601 tgttgatact tcagcatctg gttctaataa cagcaccggc taaaagattt tacattaatt
      661 acagcacata atttaatata aacatattta attacaattg atgagcgata aactgttcaa
      721 gaatgactta accccttaca tatgtcaaaa tgattggagc ttcatatata tcttttcact
      781 tcaggagtga gctacagaca gtatgaaagg ttaggaatcc ccatttttag gaaaaggctc
      841 taactggagg ggtgaattat taacatgtta tttcaatctg attcaagatc acgttaaaac
      901 tgacagcata ctacagaatt cagtaagaca tttaggcaga aatgcagcta agcccaaaat
      961 tgctatctca aaaattccac tgcaattgcc acccaaccct gcggcatctg cagct
//
LOCUS       KCKM01002575             976 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40413apa ultra-conserved element locus
            uce-2377, sequence.
ACCESSION   KCKM01002575
VERSION     KCKM01002575.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 976)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 976)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..976
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40413apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>976
                     /note="ultra-conserved element locus uce-2377"
BASE COUNT          234 a          183 c          269 g          290 t
ORIGIN      
        1 tgataacagg gtatcatctg taagcgatct tgcagaattt atctctctgc ctcagtctga
       61 attttgtact ttacaaaagt aattggaagc tgagaaagtt ctctatgact tcgctgagca
      121 taagaattta aatgaagatt ccaagttaag agtgtgggag tactgggtga ggacgtgttg
      181 tcgtgttggt gacagtgtct tagaggggtt tggatgtgag ctgagatgct ggtatggtag
      241 taatttgggt ttaattatgt tagaggccca gattctcagg aaacgtattt ccaggctgat
      301 ctcgtaagtg aattgtaagt gtagaaagat cttctctgac tcctgtactt atttgtctga
      361 caggttcaag ggcctcaagc cgactgttat ccttctctcc cgaggaattt ccgacgctga
      421 aagcagctgg agagcaggac aaggttggca aagaaaaggg cgccttagat ccgtcgtatg
      481 ggccaggacc aagcctccgc ccccagagta agtgaatgat cttatctttc tgccttgtcc
      541 cagcttataa ccctgtagac tgtgttttgg gcagggggat gccagctcac agtagtatcg
      601 gatccttcca gttaggtttg ttttttgtgt gagctcacgt atgtcaggct gcttagcaag
      661 tgatcacaga tccacatgta gcgtgaatgt tcactggctg agttctgtgg tccagacagc
      721 cagactgtca cctgctattg tttaataaga tctgctgcgt gatactgaaa ggcagccccc
      781 ttcctgtgat agggcagtca caagtgaaat gagtggatga tgtgatgtgg cttctctcta
      841 agtgtttact ggtgatctaa ctggccttaa ttctggtaag gactgtggag atgggaagca
      901 gggtttgtcg aaatttaggc ttgctggcat ggaaggacac cactggtgca gccgttaggt
      961 agtaatggtt ggtact
//
LOCUS       KCKM01002576             913 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40427apa ultra-conserved element locus
            uce-4082, sequence.
ACCESSION   KCKM01002576
VERSION     KCKM01002576.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 913)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 913)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..913
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40427apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>913
                     /note="ultra-conserved element locus uce-4082"
BASE COUNT          273 a          174 c          174 g          292 t
ORIGIN      
        1 tttctagtgg cactttacaa cgactgatta atatattttg aatattttcc actgaaaatt
       61 tgctttgctt gattctcttc ccttggaaac tgatatttag taaaaactaa tcaacatgtc
      121 aacattttgt ttattcttaa atagcatcat ttattattat tattacagtg tcactttgtt
      181 ctttgccatc cagaggattc caggagtgtc ggctccctgc ctggcctgcc tatttgccat
      241 tctgggtgct tggcccttct tccattgcta tgacaaggtt acacaaagtg tgcagccctg
      301 cgaaaacagg tttctttgga agctgaaact ctgacagact tcgtacacag caaggcatcc
      361 gtgacatctt ggtgtctgcc agctccattc ctgcttgatt agctcttggt tacctcagtg
      421 ataatgtctg gaggcactga ttaatgtaca ataatggtac atctcactgg aaagataagc
      481 ttatagaaga tcaattaaac aggggcaatt tcacaggcta caagctagaa gaatggtact
      541 tgcagccttt tctgggagct attttttaat cagtttcttc tgcctgctct agaattttca
      601 tgtaaaacag taactatcat agggaaaaag gaataccctg aaaatgaaag gtgatggtac
      661 ccattaaaat tacaagggaa aatgaatatg aatcaaggcc cctgaacatt ccttcagctg
      721 tcagaaggtt acaaattctg ctttgatggt aagacaagaa gttttttcaa atgcaaactt
      781 gccataaatg gtacatagga gaatgccatt gttttatgca attacattgt tgcctgggca
      841 accatgtaca aaagttaatg taagtacagg tttaaagatg aagtgtctcc taaaatggaa
      901 taaaacctca ttt
//
LOCUS       KCKM01002577             689 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40443apa ultra-conserved element locus
            uce-3909, sequence.
ACCESSION   KCKM01002577
VERSION     KCKM01002577.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 689)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 689)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..689
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40443apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>689
                     /note="ultra-conserved element locus uce-3909"
BASE COUNT          201 a          134 c          146 g          208 t
ORIGIN      
        1 tttatttatt tatttttaaa taaaatagag aaaacaagcc cttctgtgaa ttcagcggta
       61 gcacgagagc ttgcattaac aacgtttaag caaagtgttg aaaacatact gaaataaacg
      121 ctagtgcact tcaggggttg aaaggaatat gcatcaaaat gcttggcatt taattttttt
      181 tttctttggg aatttagcca gtgaaatata gctgccagtg tctcaggcct gcgtgtgttc
      241 ttctgcaata tgctctcgat caatcagatt tgcataacta aactgtcggc aagcccgctc
      301 ggctgcccag gtgcagggcc atttgcatat agaacagtga ggaggtccca agagtcactt
      361 cagactccag tgactgctga gcccgcagtc cacaccgcac tggaaatgaa attggaatga
      421 caaaaaaatg gttgtgctag tctgcaaggg tgaaatatgc acttgtgttt caaaggttat
      481 gtagagatca caagacagca ttcaggcacg agaatatgca caagcctaca ggaaagcaaa
      541 taccgtcgcg tggagtttgt ttccctttcc ccagccacaa tgtttatttt tatatatctg
      601 catgtaggga tatgtctata taccaaattt tttttttcct ttcaggttgt gtatgacaat
      661 ttcatgtatt cttcaatcct taggtacag
//
LOCUS       KCKM01002578             919 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40459apa ultra-conserved element locus
            uce-1405, sequence.
ACCESSION   KCKM01002578
VERSION     KCKM01002578.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 919)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 919)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..919
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40459apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>919
                     /note="ultra-conserved element locus uce-1405"
BASE COUNT          299 a          186 c          178 g          256 t
ORIGIN      
        1 ctttataaac caggtgtcag acaggatggg tttcaacagc cagacgataa ttacacttta
       61 gcataggtga ttatgaaata aatcaggaca aaaaaaaaaa agccctgcac actttttgac
      121 ttgaactcga atgatactat ataggctgaa tgtgcaggca aggttcccac aatgcactgt
      181 gaaaacctag gctaacaacc accccgctgc gctgaaaacc cccaaaaaag acaaaagcac
      241 aatgaaatag aaagcttacc accggtagct ttcaaaacga caaactaggc aaactataca
      301 tctccaccac tccaattttg tcagaatgct aatgagcttg ctctgatctt tactcggctt
      361 cccgtgtttt ctacatcttc aaggaccaca tggcgctagc aaaataaaga caactaaatg
      421 agaatttcga atgctttttg tgttgggacc tggtgccttt cagttgacgc actcgttgaa
      481 tattctcaac ttaaaagcgt acaacagggg gctgggtatg aacttctgga aatttgtaca
      541 aaagtaaatg agtgtgatga ggaaaatatg agaaaaattt ctgattaatt tccactctat
      601 aatatcaatg acaccttcag cccctctcat actactctaa caagagatgc tgataaaaga
      661 tgaatgattc cgtgttgttc acagtgaatg tttagtggtt ttttaatagc ggcattctac
      721 ataaaaggca ccaggaagta ctctgcatta gcagctgaga tcaccagtta ataggatgat
      781 gtcttttagc ttttgtcaca agattattag aaaggatggg tttctgttct catcccggca
      841 tactttggag tgcttgttga gcacaagtgc taaaatatag gtttctcggt attgtttcac
      901 atgcaattaa tgcaacacc
//
LOCUS       KCKM01002579             893 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40474apa ultra-conserved element locus
            uce-7898, sequence.
ACCESSION   KCKM01002579
VERSION     KCKM01002579.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 893)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 893)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..893
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40474apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>893
                     /note="ultra-conserved element locus uce-7898"
BASE COUNT          260 a          157 c          167 g          309 t
ORIGIN      
        1 agtttgaaca cagagatgct tttaaatgca gtgcttcttt cttttataga tactgttaac
       61 actgtttgaa aatgcattat ttcacgcaga gggtgtctac aagtgagtga atatggtata
      121 gtacatcaag ataaagagtt attttagata aggtgataat actgaataat gatgtgaggc
      181 tttcagcagt tctgtttcat ctgaaatcga gatttactgt aatgtttcaa agtcccccga
      241 atctctgcca cttgaacaat cttgctctaa ggaatatgtg gacattagca taaaggttgc
      301 acatgttata caaagtgtaa ttaaagaagc tttgatcccc aaatgtcagc tagcttgcta
      361 agtgtcataa caaagtgtca agcatctggt atacagttaa tttgtagtca ttaactgcat
      421 attgttgatg tgacagtttg ttagcaaagc aagcttgaca gtttgcattt tgttattgat
      481 tgacacctat agacctcccc acccgtctag tttacattcc ttatgagggt tcctcaggtt
      541 gcacttttgc ttttaactaa ttagtttagt tagttggtcc aatatgttga aatggagtag
      601 acgtatatag ggagcccaag acctctgatt ccagagcaag agtgtttctc gatttcatat
      661 atcttagtct gtcttcgctg ggctagcaga cagttttaca aatgtgcttt tctgttgcta
      721 atattggtaa tctatagctt gcattaacct ataccatcaa aaccacctat ttacatttac
      781 acaaagcgca attatgatct agattgcagt gtcttccaat gtgacttacc aaagagcctt
      841 aaagagtacc tttttaccgt gttccttttt atactatgca gcataaatgt att
//
LOCUS       KCKM01002580             488 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40489apa ultra-conserved element locus
            uce-2, sequence.
ACCESSION   KCKM01002580
VERSION     KCKM01002580.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 488)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 488)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..488
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40489apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>488
                     /note="ultra-conserved element locus uce-2"
BASE COUNT          153 a           70 c           98 g          167 t
ORIGIN      
        1 gtgagtgtgt gtgcttgcgt gtttgcatgt gtgtgtacac agattttttt agtccttaca
       61 gtgtaaaaaa ctttggaatt gtttgaccct gtaaacacaa aattcatgtg tctcaccctg
      121 ggacaaatgc attcttttta aaagcagcat atgggcagcc ttggactgat gttagtttat
      181 tgtcactgct tgataacgtt taatggaaaa gatacaagag tgccaaagaa ttttaattat
      241 ttttgtgata aagttatatg ttcggccttg aaaaagtgga gataatgctg ggattcatta
      301 ttattcccag tgtgtttaaa cagacgacac agaatgcaaa caaaagcaga tgaaatttga
      361 aaagtattat caatattgca gatagcagat gccctttcca atcagaacaa gcatatcttc
      421 tatagcaact ttatggttga gtagtttatt catttctatt agaaggttgt acgtttctaa
      481 aatatgta
//
LOCUS       KCKM01002581             515 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40503apa ultra-conserved element locus
            uce-4619, sequence.
ACCESSION   KCKM01002581
VERSION     KCKM01002581.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 515)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 515)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40503apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>515
                     /note="ultra-conserved element locus uce-4619"
BASE COUNT          158 a           95 c          124 g          138 t
ORIGIN      
        1 cttgttgtgt tggccggctc ctttgtttat acagcccccg ttcgaccttt taaattgctg
       61 ttaatgtttt agcgtaacga attagtctct catcacgaat caggactcga aataaaaaaa
      121 aaaatatata aaaaaaaaaa ccctccgagg ccaacttcct gaaattgggg tcattctcat
      181 ttgcaaggca gagaatctga gaaccttaat gcaaggaaat ttattcaaag gcagagcccc
      241 ggcgtgatta ggccctttgt aattatagct cggagagatt ccactccagc ctcctgcctc
      301 cctcatggat tagcaagtga gtcggaaaaa tacacaggat ttaattagag gcaaattaaa
      361 attggtaatg aaataggggc agtagcaaat ggcagggagt tggaagggga aaagggagct
      421 ggtatctctc ggggctgcgc tgtctgccta cgtgtgtgtc tctttatttt acatttagaa
      481 atgtaaagat ggtcgatgta aagaagaaag ggagg
//
LOCUS       KCKM01002582             751 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40518apa ultra-conserved element locus
            uce-2828, sequence.
ACCESSION   KCKM01002582
VERSION     KCKM01002582.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 751)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 751)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..751
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40518apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>751
                     /note="ultra-conserved element locus uce-2828"
BASE COUNT          245 a          120 c          134 g          252 t
ORIGIN      
        1 atagtaattt gggcactcta tgttcatatg gaattttact atttctttat aactgattga
       61 gaatgttttc tgaattatat gtaaaattta aactactgga caaatatttc attgtcctca
      121 tacagctcat tgctgctact tgtttggaaa aatgaaaggt aagttgaaaa atgcaccttt
      181 tccattttca tctctaattg aattctctct tgaccccctt attccccatg gctgtatttc
      241 aggttttgat gataagaaaa agaattttgt atttggataa tacaattttc tcacttgcct
      301 tcagcgacct tcagctcaat ttcctctccc cagagacact gtatattata gaattgaatc
      361 aaattcctta ttcatagaaa aaaagttcca atttaatctg aatattcagc attttacact
      421 ggtcagggtg atggatggca aattgaaatg cttttggttc aggtaatcaa atggtagaat
      481 tcagagttgt attgaaaaaa ataatgaagt ctattcaata ttctcataag gtgcaaaaaa
      541 tgcacattac acggtagaac agggtttttt cttattacct aaccaataac atctccattg
      601 caaaaagtat agtaaaacat taagaattta tgtaggtttg aacatgtgaa aagcagccac
      661 tgttgaggga aaatgtgggc atcttcgtaa gagtgcacaa atgaatgcct acaaaacggg
      721 ggcatggaat ggtttgggtt ggaagggacc t
//
LOCUS       KCKM01002583             355 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40533apa ultra-conserved element locus
            uce-2025, sequence.
ACCESSION   KCKM01002583
VERSION     KCKM01002583.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 355)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 355)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40533apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>355
                     /note="ultra-conserved element locus uce-2025"
BASE COUNT          141 a           61 c           45 g          108 t
ORIGIN      
        1 tgcacccaac attaaaaaga gattgaggga agagattaag ataaatgcac aaaacacttt
       61 cattttcttt attttcaatc gatactgtat gaatacaaag tttctagaaa gctacaaaaa
      121 ttctaccact ttatcaagaa ggcatcaaaa tgtgtcactt tgcaaagaca tgaaaacacc
      181 tgcagtaacc gacacaaaaa tagcattttt agagtgatga aataattgca cttaactgtc
      241 atggatatta aagttatcac acatatgtac cgcgaaagct agaatacatt tttttttttt
      301 tacaaagcac tttataaaaa aattctctgc acacaaaacc tataattttc atatt
//
LOCUS       KCKM01002584            1052 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40549apa ultra-conserved element locus
            uce-3670, sequence.
ACCESSION   KCKM01002584
VERSION     KCKM01002584.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1052)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1052)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1052
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40549apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1052
                     /note="ultra-conserved element locus uce-3670"
BASE COUNT          312 a          269 c          218 g          253 t
ORIGIN      
        1 caagtatagc agagatgctg atttcaaaaa cacatccata catataacag tcaaagcaat
       61 ctaaacataa tatcaaaaca gaaagaagtg tgacagagca gaggaaccgt acgccgaatt
      121 ccatctgcgt gccaactggc agccgagcta caactcctgg aaacaccatt agattcagta
      181 catcaagctg cgataataaa ttccaaggga aaaagcccta acgatggtac ggatttatct
      241 taaaccacct ttgttctgag tcttccaggt attacctcat ctcaagaagc ctgcattcgc
      301 gtgaatgcgg agctttgtct gactcctcct gacgtggtgt gcctgccgcc accacgcgct
      361 gtctgcgaac gccgtgtctg acattggaca aagcacggct ttccacaaca gacaccttcc
      421 aaaaacataa ctcgctagac taatgggcag ttagaagcca gaatgactgc cctccgtctt
      481 ctccttgtgt aactttgcca gagtccttgg aacttgccaa attcggtcat gcctgcttag
      541 cttgctcgac tgattgtgcc agaaacgaaa ataagacaca gatgtatttg agctctttga
      601 gatgccagta agagagacag ctaatggctt catcccgacc ctcccctacc agctggacac
      661 aggtgggggg ataatgaggt ccctctccct aatcaaactc aattatttac tactctatat
      721 agccacaaag acattcacat tcagctcaga acataaaatg cactgtgggc tacttccagc
      781 caccgccacc gggcatttac aactaactcg agtggctaag agtttgcctt ggcaggggtt
      841 gaagtgtata aagttctgca aactgtttct gctcaaacat gtcctgccga aacagggtct
      901 ctggcgaggt tccacaactg tcagcttggt aactgcacaa catctgaaaa taaatccaac
      961 gcgcaggatg ggtgagatct gaaatgaaac accaggcttc atcgtgaagc ttctcagaag
     1021 catcaacttt tttcaacagc gattcaatat ta
//
LOCUS       KCKM01002585             432 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40565apa ultra-conserved element locus
            uce-3137, sequence.
ACCESSION   KCKM01002585
VERSION     KCKM01002585.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 432)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 432)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40565apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>432
                     /note="ultra-conserved element locus uce-3137"
BASE COUNT          128 a           71 c           80 g          153 t
ORIGIN      
        1 gaatgccatg cttggctgtc tgtcttcttc ctcttttctt ctttcttgaa atttatttct
       61 gcaagtcatt aaaattcaga tcccatcatt tgtaacaaat gatgtgaagt gttaggtaca
      121 gtagttggag tatatgtttg ttaaaatgaa gggagagact cttccaacac tttgggtttt
      181 tatgaatgat ttacatctgg tgctaaagtt cataaatgaa acgtgggaga accagatgct
      241 tcatttcttg actgcatcgt gtctgcacat actgatggtg aattgaaaac aggaatgtct
      301 cataaatcaa gaaaatctat ttttgtactc ttgatttcta ttctgaacat ccatataaca
      361 cccaaacaaa tgtggtaaaa ttggttccct gagaaaccct ttatgtttag taacagtgtg
      421 gacatgttaa ta
//
LOCUS       KCKM01002586             527 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40579apa ultra-conserved element locus
            uce-3300, sequence.
ACCESSION   KCKM01002586
VERSION     KCKM01002586.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 527)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 527)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40579apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>527
                     /note="ultra-conserved element locus uce-3300"
BASE COUNT          142 a          102 c          105 g          178 t
ORIGIN      
        1 atccttgaag gcctcttgca gtagcagcct tataaactca acagcaatgc tgaagttctc
       61 agacttttaa atgtatgccc gtaaacgcac tcaccttgtc ggtcatgttc taaatgccgc
      121 agctgagtca agttctgtgg gacgtgtccc ttccacctaa gcggtccagt cccgtttggc
      181 cctatgataa aacaaggagg tatgacttga tgcaagattg ctgtgcccca tttctcttct
      241 ttcagcttga ctcaatgtta tttatctctt tctaatctga cagggctcgt ttacagttaa
      301 gataactgat cagaaggata tgatgataag aggtggaata gttctgtttg gagttaaact
      361 ctgtaaccag tagactcaaa cacaaacaag ctaaaatggt gattaacgat gcatgtatgt
      421 tttttttcat atagtcaata gacctccgtg tgcttttttt catttattta tttattacag
      481 taatgaagtg gtgttgatag ctaaactgtg tgcttttatt taattga
//
LOCUS       KCKM01002587             661 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40594apa ultra-conserved element locus
            uce-5, sequence.
ACCESSION   KCKM01002587
VERSION     KCKM01002587.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 661)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 661)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..661
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40594apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>661
                     /note="ultra-conserved element locus uce-5"
BASE COUNT          189 a          137 c          144 g          191 t
ORIGIN      
        1 atgagccagg tgtcaagaca ggaaacctat aattattatg gaataaaaac aagtttctta
       61 aaaacaaaac acgtttgttt gtctagtttc tactacatag catttccact gaagattgta
      121 attctttttt ctgtcccatt ccccttgtac ggagtgtccc cttgggaagt ggggcccaag
      181 agccctttct aggatgggac aggatattac agcttggttt gtgcaccagc atccttaata
      241 tttccttcct ttcagaagca aatagagcgt acccttatct gaatgctaat ttcctagtta
      301 aaaccctccc ttgctgacaa gggactgaaa gagttttaaa tcacagatgt agagtatcaa
      361 atgcaataat gctcttgcaa tagtgcattg aagcctcaat taattaaccc ttgggctaag
      421 taggcaggta catggtggtg gccacaggcg gtggatggat gagatttaaa tgggcatctc
      481 atttcctcag cacggaacat gccgtttggt tcagaaagga gtcattttac acactcgcct
      541 catttacgct cagctttaat ccctgtaatt ccacctgaga tccaagcaag aatgggaaaa
      601 gagagtgagg tgcaaaaggc tacagagctg ggctttgttt acatatgttt ccctggggac
      661 a
//
LOCUS       KCKM01002588             470 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40610apa ultra-conserved element locus
            uce-2736, sequence.
ACCESSION   KCKM01002588
VERSION     KCKM01002588.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 470)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 470)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40610apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>470
                     /note="ultra-conserved element locus uce-2736"
BASE COUNT          176 a           62 c           81 g          151 t
ORIGIN      
        1 tgggtggcgc accccatggt aaatagatcg attgccagca ttatgtaaca taaagaaaga
       61 gagctcacta catcattttt tctgtaatta tacaaaaata aaaggagtgc ataaatgaga
      121 ccagaaaaga gctctgagtg tttacagaaa taaaaataaa tgagtgtgtt tttaaaatta
      181 atattttcaa atgttcaggt tgaattaatt tgagaaatat gaatatgtat tggtagtgtt
      241 aattctttgg ggttttgaaa attcttacaa ccacataatt aaatgagtgc ctttagaaat
      301 actgataaaa cccattgcca ttcaaatatc catacaagac aacaggggct gtaagctgta
      361 ggctttagag attagtttgg ccatgggcca gtatttatca caacatttcc atcttagaag
      421 ataaaattta atcattttta tttaaatata aatcaaaatt aatgcagatt
//
LOCUS       KCKM01002589            1068 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40625apa ultra-conserved element locus
            uce-7095, sequence.
ACCESSION   KCKM01002589
VERSION     KCKM01002589.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1068)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1068)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40625apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1068
                     /note="ultra-conserved element locus uce-7095"
BASE COUNT          337 a          235 c          183 g          313 t
ORIGIN      
        1 tgctttaatg ggaggaataa tcaaatgttg tatccaatat tttaaagtaa atgatgatca
       61 tacagaggaa actatagaat aggaaaagtg cgtaaattat attcaacttt ctctttcact
      121 gcaacaagac agaggaaaaa ataccatcct tccccacctc caatattcca cattaagcag
      181 ttccaggtgt tatgatttct ggatattttt ccctttggtt tgtattgtac tattgcaatt
      241 ttatatttat cttgccatct gtcagaagaa agaacagata tagaacagtg gcaaaaccat
      301 gttaaagaga ctgccttgag ataacaaaga gaaaagttaa tggacacaga tttacaaatt
      361 attaatgatt tttcttgtca tttcttgaaa aatgaaagct atgcatgctg tctctctccc
      421 caaacagatt gcattttatt cctctgcagt ttgtccgtca ggcttcactc tgacaacata
      481 atccaaaact aatccagagc attcagtttt ccttgttggc tctcatgcac actgcttaga
      541 caaatcctgc tacctgtcag ccctcctgtg tgtgccaaac aggctgccag gttaacccct
      601 ggggaagccg cgagacccgc tgacttaacc cctgcttccc ttcaaataat ccactgtaaa
      661 tacataggac gttaacaggc taactgttct aatcagggct agatccctta aaatctgttt
      721 catacacagc ccttaagaac tagggatctc ggcatcgctg ctggaagagg aaaggactgc
      781 ttccaacaac acaagcactg agcaagcaga tggatagaac acactgaaag gttttaatcc
      841 cctgaagggg tctgagaaaa tatacacatc acttcgactg tccacctcat tgcttataaa
      901 ttttccctaa ttgtcaggac aagatcagaa ataatttagc acaatgaaag acagcctaat
      961 ttagttacaa ttcaggctct caaatggcaa actttctacc agttgctttt gtccactttt
     1021 gcaaaaatca ttttcataaa gactagcttt tcagcacctt agggtttc
//
LOCUS       KCKM01002590             607 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40639apa ultra-conserved element locus
            uce-529, sequence.
ACCESSION   KCKM01002590
VERSION     KCKM01002590.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 607)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 607)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40639apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>607
                     /note="ultra-conserved element locus uce-529"
BASE COUNT          139 a          147 c          114 g          207 t
ORIGIN      
        1 ttttttttta tttcccaaca tggcggtacg tgcttatgcc cgctatctgc ataagtcttt
       61 tgtgtattgc taatggagtg ctggaattgt ggcagctctg agcagggaat acatgtgagc
      121 aacaatatgc tgacagaccc ctcggtggaa tctaatctgt tccagctcat gcactcctca
      181 gaaactattt aactttcatt aaactgtgtt tgatatcagt taaatagaat gcatacggca
      241 ccaatatagc tcatatggtc tcattcattc gatcacagca gtgctttttt cttatatttt
      301 ccccccactt gtgtcagtac ccggtatagc tgggtaaata ggagaccttt gaagatatag
      361 ttagtactca gatttcttta ttcttttgtg ctggtttctt agtgttgaaa cagtgattca
      421 tgtatgtctc agacagcctc cattaatttc atgtaatgta gcttttatct cgtagctggg
      481 acaactatct ccagcgctgt ctccccacag catctctcgc acagcagccc accggcttcc
      541 caccccccca gcgccccttt ttctactgcc agcagctcat ttctggagaa tttacttttg
      601 tttcgtt
//
LOCUS       KCKM01002591             967 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40654apa ultra-conserved element locus
            uce-1048, sequence.
ACCESSION   KCKM01002591
VERSION     KCKM01002591.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 967)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 967)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..967
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40654apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>967
                     /note="ultra-conserved element locus uce-1048"
BASE COUNT          294 a          165 c          178 g          330 t
ORIGIN      
        1 ttgacgtttt tgtacattaa gctaccctgc agggttttgt gttcactaca ttttaaacgt
       61 tgttttaaaa gtagaggaac ggaaaatgga aatagcacta gttcttctgc ttcttcgttg
      121 aaggatgtta ttatccccgt atattctagc tgctctggta accagttaac ttactgacaa
      181 tcagcagata aagtttagac atcgttatgt acatgaagtt caaaaaaaaa agtatgtaaa
      241 ttcttccatg tacattttcc acagtattaa gggttgtacg ttcttttgaa acttagatca
      301 gctgcatcca aatagtatta aataaaactt ttgatacagg tcatttgcag catgtatgcc
      361 aattagttta gataaatcat gcattgtcct acaaactagt tatttctggc ttattgtaat
      421 atagctcctg aattttttcc agcagcataa taaaatggct aatcaggtga atggtaatgc
      481 ggtacagtta aaagaagagg aagaaccaat ggatacttcc agtgtaactc acacagaaca
      541 ctacaagaca ctgatagagg caggcctccc acagaaggtg gcagagagac ttgatgaaat
      601 atttcagaca ggtataatat gcatttcttg tttctgactg gttatgaaag tgagggcata
      661 ccattttcaa atttttatag attaaggttt aaaaattcat tgtttttgat ctgtgtagct
      721 ctgaatgttt tgctactttg acctccctaa aggcaaattg ggtttgacac tgactaatta
      781 tttgacacat ccgtagtgtt gtatgtgata tcctagttgc tttagggcac cgagcactag
      841 tttcgtagat gttgtcaaat aaagatgtat gtttgagcat actaaactgt acatttcctt
      901 caatccgaat catcattttg cttttacttt tctactgtca actcctcaca gtggttctta
      961 aatactc
//
LOCUS       KCKM01002592             318 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40670apa ultra-conserved element locus
            uce-5723, sequence.
ACCESSION   KCKM01002592
VERSION     KCKM01002592.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 318)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 318)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40670apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>318
                     /note="ultra-conserved element locus uce-5723"
BASE COUNT           45 a          131 c           97 g           45 t
ORIGIN      
        1 gacaccaaga tctgccgccg cgccaccggc aggggccgct gcgacctcct ccaggccctg
       61 cacgccacgg agttcgccag tctcaacggc gacgtgcggc tccttacccc cgacgccgtg
      121 gagggctggt cggacctggt gcactgcccc tctcagcgcc tgctcgaccg cctggtccgc
      181 cgctacgccg agaccaagga ctcgggcagc ttcctgctgc gcaacctgaa ggactcggag
      241 cgcatgcagc tcctcatccc cctcgccttc aaccccgagc cgctggtgct gcaggtaagc
      301 gcgcccggcg gcgcccgg
//
LOCUS       KCKM01002593             329 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40686apa ultra-conserved element locus
            uce-4489, sequence.
ACCESSION   KCKM01002593
VERSION     KCKM01002593.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 329)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 329)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40686apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>329
                     /note="ultra-conserved element locus uce-4489"
BASE COUNT           81 a           88 c           78 g           82 t
ORIGIN      
        1 agcacaaggg ctgctcgggg ggacgaggct cccagagcag gcaggaaagc cttgtccctc
       61 ggcgcaagtc cccatcctgc ctgtccccct gtcttctggc ccgtctacca tgcgaaaggg
      121 tctgtgactg aaatcttaat gctaccgaga cacagtaatt ggcaccaatt aaattgctac
      181 attcatgttt gaattgcttt aactggcgag acacactgtc ttatttatac aaaaaaatat
      241 gtttgcttgt gggtttgtct gaaccagggc cagcagaaaa tgcaccattt cgagccccgc
      301 tgcaaacatg ttctctgctc gcaaactgg
//
LOCUS       KCKM01002594             695 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40701apa ultra-conserved element locus
            uce-2146, sequence.
ACCESSION   KCKM01002594
VERSION     KCKM01002594.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 695)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 695)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..695
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40701apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>695
                     /note="ultra-conserved element locus uce-2146"
BASE COUNT          198 a          142 c          176 g          179 t
ORIGIN      
        1 tcaattgcac ctcagggggg aactgatccc aatcctgccc gtgcctggtg acctgagtgc
       61 tagcagtcct ggcaatctcg ctgtttgctt gcagtccgtc ttctgggaat cgctttccac
      121 ttctgaggaa tacaataacc tggcagctac ctcagatcct gcctggatgc ttcgaaaaaa
      181 gctattgctc ccttagagat caagtgggca gcagcccctt aacaggaact ggtctatgag
      241 ctaccaccac atgtctaatt aatgaccctg ccggtcgcag ctggaagagc tgagctgggg
      301 gtgattaatt aaattagctg gcagaggaaa ttacagtgga aaagccaaag tttgattgct
      361 ccataattaa ccgcagtgca aataatatct gcatctataa cttccagcga tgagatcaga
      421 agccaattga atttggcact gattgaagct gtaaatatcc tgtggtgaaa aatgataggt
      481 ttgttctgaa gggaaaactt acagaaatgg acatccagcg gatgcatgag ggaagcaggg
      541 gacatgggag gaaagagcac tggaattaga tcttgatttc agtttttttc tgtaggcttc
      601 tggagtagtg gaggactcac catgaaacgg aaagatatat ttaaaaaatc tgctgtgggt
      661 gctgaatgca aatgtccttg tcagagattc agcaa
//
LOCUS       KCKM01002595             748 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40717apa ultra-conserved element locus
            uce-3336, sequence.
ACCESSION   KCKM01002595
VERSION     KCKM01002595.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 748)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 748)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..748
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40717apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>748
                     /note="ultra-conserved element locus uce-3336"
BASE COUNT          230 a          147 c          136 g          235 t
ORIGIN      
        1 tttttccccc tttcgttgtc tggaaaataa tgagtgcatc tgtgcttaga tctagagctg
       61 gtatccgtct tccaaaacct ttcctttaat acagattgca ttcaaccccc aaaatatatg
      121 aaagcccttc taagcaatac tttgcatcaa gacagagtta gatgtatggg ctgagtgtca
      181 gttgattctg tgtttccacc tagctagtga aaggctctta ttacctttaa attttggtgc
      241 aaacaccacc catcattttc ttcctctatt taaaaggtaa cccatatatc tgtcgtttta
      301 ggtttccaaa gactcgtaac ttaattcctt caggctattc atcagcacag taattaaact
      361 agcaaatgga tgtaaataaa gtgaaattgg tttcatgaca gatgagccga agaggcctct
      421 gacatgaaac aagccaggac aataattatt tctgcaccgg gctatatgag gaactccatc
      481 tggatttatt aggtgctgca agttatttgc tgggagcagg caagacagga ggactcactt
      541 taatttgaca ggattttttt tttctttttg catcctaagt aggttacaga aatataaatc
      601 tggaattaac tttggcaata ctctcagaag cctctacaca atgtaagaac taggcagtga
      661 aaataggtag taggagaaag acttattaaa caatttcttc ccaaacgcta aatacgagaa
      721 aatctatttt aaaatcctgc tctcgtgc
//
LOCUS       KCKM01002596             860 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40733apa ultra-conserved element locus
            uce-451, sequence.
ACCESSION   KCKM01002596
VERSION     KCKM01002596.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 860)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 860)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..860
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40733apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>860
                     /note="ultra-conserved element locus uce-451"
BASE COUNT          216 a          264 c          171 g          209 t
ORIGIN      
        1 gatcttacat ttcatgtttg tttgcagaaa atgatcagta ggacaaagct gataatttat
       61 gcagaaacaa tctctcggca gagttacaag cgcattccta gccatcaaca caacccggca
      121 gactaagctt gacacaggtc taattagcat gcagatatgt gtcgcctcat tggcaattca
      181 aattgctttt ttataatgta cctcaaattg tgctactcaa acattgtatt tgatttccaa
      241 agccccctgg gcatcccata atgtctccct tcatcctggg tacgaagcat ttattgaaca
      301 atctgcttac actctggcta tcttttcaaa aacacccaaa catcgtaacc gtgggaccag
      361 cttttcctcc tcgtcagaca gcaacttgtt cttcggcggg tgccacgtcc gcaggttcag
      421 cgatgatatg ttacctcgcg agctcctgct cccacggtgg ctgctctata gagggcttca
      481 ttcctgtgcc actcatttaa aaagggggag gatgtctatg gagtgcacat taatatgcgg
      541 cacataacca cgtcgctgaa tgccagcctt ccattcttca ttaaacaaaa tggctggatt
      601 gcagtgattg ttttcccctc cgcgcacacg cgcgcgcgca cgcagatgca cacacacccc
      661 acgcatgcag gcacataccc acacacccca cacacacgca cgccagcttt ctctcttttt
      721 ctccctcccg cgcacgcacg cactttcccc cacgcacacc agccacacac atacaagcac
      781 acacgcacac atgcaccacg caagcgcgcg tggggcattc cctgccagcg cggcgagtta
      841 cgtgcgcaaa gttgcctgcg
//
LOCUS       KCKM01002597             841 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40748apa ultra-conserved element locus
            uce-5385, sequence.
ACCESSION   KCKM01002597
VERSION     KCKM01002597.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 841)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 841)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..841
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40748apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>841
                     /note="ultra-conserved element locus uce-5385"
BASE COUNT          239 a          184 c          155 g          263 t
ORIGIN      
        1 aattaaaaca caactgcagc aagactcttt ttccaagcca gtatcacgta ttcgcgcaaa
       61 ggccacacgc tgccgtattt tattttattt tttttcatta tttttttatt ttaactttgc
      121 tacttcctca gagttaatct gttatgaaaa attacttccc ttatttattt ttaaataacg
      181 ggagtacaga gactcccaca ccacagccct gtgcggagaa ctggctgggt atttcatcac
      241 agcgctgaga gcctgaacgt ctgctaacag gcagttttcc agctcactgg cacaggcaca
      301 agtgaaagca gcacattcat tttgtgcaat ttgctttacc ttcccacatg gagttggtgc
      361 atgtaaaagg ctgttaagta ctaaattatt ccttatcaaa tcaccatcat ctggagtcat
      421 gatcaacact aattaaatta ctttcactga gcacggctcc agcctgctgc ctcggctgtg
      481 aggtacattt tattttgctt actgtacagt ccttgcaagg tacagggcac agtgctagaa
      541 ggcatctgtg ctgtagtttt aattaaagtt tacctcacct tcctccctgc tttataagct
      601 agggtaaagt gtatcaaatc aagtaggtta acgccttcat ttcatttagg gaaagcatta
      661 cagtccaaag tgattttata ttagatcttt atcttaacta tggccagaaa gataatgtag
      721 ctgtaaaatt taaagccttc ctcgggcagt cccctgacac aatcactgtg ctaagcttta
      781 gctgtgactc cttaaacgta cgcttttaga ggcagaaagg aaagaagcct gagaaaaata
      841 c
//
LOCUS       KCKM01002598             822 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40764apa ultra-conserved element locus
            uce-7724, sequence.
ACCESSION   KCKM01002598
VERSION     KCKM01002598.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 822)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 822)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..822
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40764apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>822
                     /note="ultra-conserved element locus uce-7724"
BASE COUNT          273 a          148 c          187 g          214 t
ORIGIN      
        1 ttgacatatt tcttcaaaaa aaagcatggc ttaacagtct ggagtgaaga agcttcatct
       61 gttacccttt aacagcaata taagaggaaa aaacagttta tgtatccttt ccatcctgac
      121 agatgtgaca atagctggaa acactgtgcc tgccaagagc ttttatcaag tatgttataa
      181 caactagtaa taagtgtaaa taataaatgg ctacgatctt atgggaaaca gtggcaatac
      241 taaacaattt ttggtgcttg ctgatgggag tctgctagtc ttggaattcc ctggcttccc
      301 agtagagttt tggcctgaca ataaacaaca gtttaatact ttatctaatc ccagccagga
      361 ggtaagttca acagcaagct tttgcagatg ttcacatcca ataatctatc cataattgat
      421 gaaacaggga ggtcagatgt aatggttgct actattccag caacaaataa atggttattg
      481 acaaaacaag gcagtgtggc gctgagtgct gagcagtgac aagcatgaaa cagtgctgag
      541 acagaagtag tgatgtgaat acagcccttc atcttgagaa ttccacaatg tgatgtgtgg
      601 cacgagggcc actctgacac acaagcagat ggaggtgact tgcacaggaa aaatgagatt
      661 ctgccagtac acgaaagaca aaggcggaga aagaaacaag gagaaagagg tggacaagac
      721 tggaaatttg ggtaagtgca ataatgcaaa ttgttcagaa atgttttcta tagcagcact
      781 gcgatccaga tgtctggact gcttttatca cactgttgcg tc
//
LOCUS       KCKM01002599             697 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40779apa ultra-conserved element locus
            uce-1062, sequence.
ACCESSION   KCKM01002599
VERSION     KCKM01002599.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 697)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 697)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..697
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40779apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>697
                     /note="ultra-conserved element locus uce-1062"
BASE COUNT          205 a          181 c          125 g          186 t
ORIGIN      
        1 aacccacaaa acagccaaaa ggccacaatg gaaaaccagg gcgagagaaa aattaactaa
       61 gaaatatgcc accttgatgt cggtttgcta aggaatattt attgtcctct catgcgtctt
      121 gcttgctctc ctaacaaata caatattttt gaggaaacta gtctccctgt accactgctg
      181 tctctctcat gccctttctc tgtctcgcta gctctgtctc tgcctccctg ataccaactc
      241 tgacaatccg tgcgattctg atggaaaatt cattagtcgt ctcttttttt ttttcttccc
      301 cattttccca gtcagcttcg cgcctgatct gtcagcctct tccatcctga ttatctggag
      361 acgccaattt caaagagaca tcttaatagt gatgtcaacg aattaattag atgtgttaat
      421 gagctaaaag caacccaaat taaattaatg cagtaataag cacagacagc aaaattagct
      481 ccaatttctg taaatgattc tgaactgtac acaacatctc atcctgctag aacattacca
      541 tcccccaaag ctaatcaaga actccagtgc aattaactgc ttaattacaa aacacacaca
      601 cagctcatag atccagcagc aggaggggtg cgccgggctg cggagtgagc ggggaaattc
      661 tctgcaacaa acaccgcgcg tcggccccgc aggagag
//
LOCUS       KCKM01002600             301 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40795apa ultra-conserved element locus
            uce-3312, sequence.
ACCESSION   KCKM01002600
VERSION     KCKM01002600.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 301)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 301)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40795apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>301
                     /note="ultra-conserved element locus uce-3312"
BASE COUNT           65 a           90 c           69 g           77 t
ORIGIN      
        1 catggggcca ttggggctgg ctgtgcctga ccccgagggc ccttctgtca atcactgcct
       61 ccccatccct tgctctcttt cacactaggc agctgtaccc atcgctgtca accaggtaac
      121 aaccagcaaa caatagaggc ctgaatgcct ggtctagaca ctcttttagc cacttatttg
      181 ctgctcttgg cagctgttga agcataaata agcagtttgt aatcagaaag ctgacatcat
      241 tgcagctcag ctgagagggg gaattgttgc tgtgcactga gcctgctttc cccccactcc
      301 c
//
LOCUS       KCKM01002601             474 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40811apa ultra-conserved element locus
            uce-7494, sequence.
ACCESSION   KCKM01002601
VERSION     KCKM01002601.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 474)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 474)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40811apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>474
                     /note="ultra-conserved element locus uce-7494"
BASE COUNT          152 a           75 c           98 g          149 t
ORIGIN      
        1 cattaatctt aatgtttaaa gtgatccagt tctgaaatga tagattgttt agaacctgac
       61 tgaaattctt ctgtagaaac tctgtgatca caggggtcct caggtgcact gaggcactga
      121 aaagctagtt ttcactgaca cataggcctt tttatcatca ggatgaggta gtggtcgtat
      181 tttaattaaa atgtcagaac aaatactgtt ggagttattg aaaatgaatc accagataaa
      241 gtgagcactg ggccatggca ggtcaaagag gcaaagtcac ctggagaaga ggactccatt
      301 cattttcctg cctaaatgag gaagaagtag cttttatgag caatgtgaac ttttaaatat
      361 attaaagagc atcttgccct gtattaaggc tcagactttc acaggctgat gaatttaatt
      421 tatatttcaa agtgttcagt atggttagca cctatttttt aaaaaatatt tgac
//
LOCUS       KCKM01002602             904 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40827apa ultra-conserved element locus
            uce-2104, sequence.
ACCESSION   KCKM01002602
VERSION     KCKM01002602.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 904)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 904)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..904
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40827apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>904
                     /note="ultra-conserved element locus uce-2104"
BASE COUNT          223 a          232 c          177 g          272 t
ORIGIN      
        1 ttatttatca tcaccttaat gcaagaatca cattgggctg catagttcca attatgcaca
       61 agtacaatgt tagatgttat gatgtgagac ataatttatt tctccagtaa ttcatttcag
      121 cgtttctatg tggagatttt tcaggtttct gactttccag gctgcaaatt ctctctctct
      181 ctttctccta ttgaccactt gttaaatctt tttgtttgtt tcccaccttt cccctgggac
      241 ccacagacag acagccttgc cagattcatt ttctgatcaa agctgtttga tttggtcaat
      301 tttgccacat tggagacgtt ctctattaca gagataaata gccttgggct aactgtcaac
      361 gaaaacttgt aagctaataa attattccaa tttcttcctg cggatttctc tggagacagc
      421 cctaggaaat acactttttg attagtaaat ttctctgtgt gtgtgtctgg acattcaaat
      481 gtgtcgactt tgattagcac cattgctttt caagtagacg ctggctgagg ggctgtcagt
      541 tgccggcagc cctgatgcat aatgcatcaa ctgggcccgg aaacaggagc ctcatccaag
      601 gctagaaagg cgggaaaatt gccccaacag ccctttgcac catgggagca atccaagctg
      661 caaagacttt gtcatctaca aacacaaggc cctggagagc agaggggcct caggagaggg
      721 aaaccagtag gagcaaagaa gggcaaggag agagccaggc aacttgctgc ctcccccttc
      781 tctttcacac cctccgctat ccccataaaa tcacttcctc cccctcttct tcttcctcct
      841 cctcctcttc ctcccgattc tctgaggagg atcggatttc acttcacctc ccacttggat
      901 tcct
//
LOCUS       KCKM01002603            1136 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40855apa ultra-conserved element locus
            uce-1349, sequence.
ACCESSION   KCKM01002603
VERSION     KCKM01002603.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1136)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1136)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1136
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40855apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1136
                     /note="ultra-conserved element locus uce-1349"
BASE COUNT          302 a          243 c          273 g          318 t
ORIGIN      
        1 atactgcagt gctgtcagat aaaacctgcc ttgcttatgc cacatataga tccattatcc
       61 cccttaacaa tcaaaaggat ctgcagtaaa agagatgatt tatgggacac gtgcatgtag
      121 cagagaggag ctgccagctg agggacctat ccttttgccg ctctgcctta tttaaaacat
      181 gagtgctgtc acctctatca acagagcttg cctggtgtga cacttgagca agtgatggcc
      241 gtgtgggctc ctgggtcagc cctctctgcc atcacgttga gctcttggcc gctgctgtgc
      301 gtcaggtagg aaagggagag aaattcttcc acgtgctttg ttagcaggga tctggtgagc
      361 aaagggttaa atggcatggg gtgctgggtc tttgtgggga tgagtgtaca tatatatatg
      421 tgtgtgtgtg tgtatatata tatgcacaca cacacacctt ggtttggctg taggacctca
      481 cgcccgcagg ccacagtcgc attatcattg ggaaattgga taacgacagc acaatgacaa
      541 atccaggttg cttgcaataa ggtgctaatc cctttgcttt aatatcggag cagcgtgtaa
      601 tgatgtttgg acatcactcc agtttactga cgaccccact ggggccagca atagaagcgt
      661 acaactgtct aacaagccat caggtgaccg ccgtcgtcaa agcaacgggg gatgcaatct
      721 aatcttccct ccatcccttc cagctcccaa taaggaccag attatagaag tggcccatca
      781 atgcttggta actcgaatca attaacgtta attcgcacaa tgctatgatg tattgtgatc
      841 actttcattt cggagaagag ggaagaaatt gctataattc acctaaaatg aggttgtcta
      901 tggtgctgag gtattaattg ggtgtccata ttaaatggaa aaggagcacg gtagtgaagg
      961 aaaagtggat gagtgactct cttggctgct attgacctat cagaagaaga cagtgccctt
     1021 ttcctttgct tttatctatt acagttttcc ctattgcgtg tcaagttgat gtattataaa
     1081 aaattcattt ggtgaccttt caccccccta gcagattaaa caatttcact gggatg
//
LOCUS       KCKM01002604            1214 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40871apa ultra-conserved element locus
            uce-2611, sequence.
ACCESSION   KCKM01002604
VERSION     KCKM01002604.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1214)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1214)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1214
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40871apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1214
                     /note="ultra-conserved element locus uce-2611"
BASE COUNT          336 a          290 c          244 g          344 t
ORIGIN      
        1 tttgtgcata aatacgatac gtgtgggatt ttgtcttaat tacatatttt cacaaaagaa
       61 gatacagccc agatatattc ttttacgtca gattgaaaag aatgatcatt ctgaaatgta
      121 gatttatttt cccttcacgt aaagcagatt tttaaaagca agattctgta tttgctttgt
      181 taaactaacc aagtgtgcaa agtttagtgc attttagcta tacaggggat acttggcacc
      241 tagggaattt tcataactgg agacttgtgc tgtatcacaa caaattaagc gtaattaaac
      301 actctgttca gtgtctattg ttaattgcag cagctaattt gatgcttagt tagtgttaca
      361 ttccgaacta tttctgagcg cgcagaattc ctcagttaag actgcttgct tgtagcccta
      421 aacttcattc ttgtctgaca gattttagct catttattac ttttgttaac cgatcagaaa
      481 ttcccttgcc aaggcagtac tttgaggtcc ttcactttca ccaagtcaga cactaaatca
      541 taggggacaa ttatcagcaa atgctctccg acaggcccta agcctgctga ggtaatgcag
      601 ctgacaaact ttgatgcgcc atgcccgtgc acattatgtt cacgtagtgt gtacatctgg
      661 gcacccttta tggcgatgca gcaaacagcc aatcatttat tccactctaa ttagcacaca
      721 tgtaaatcct caccaatcaa gccactcaca gggttaccgt tgtggcagcc atacagcaag
      781 ctggcaggac atgggaagaa agtacaagaa gcaactattg ggtttgattt gaacctgccg
      841 tcacaccacg gcaggtcccc ccagtcctga ctgtaaccag ctctcccctt cacaacccat
      901 catcgagctg cacgagaaaa aggtcatcag gcagactgcc gaccggccaa gatgctttga
      961 ttctttacag gctttgggag cacacctgaa gcgacacgcg tctccgatag cttacagcgc
     1021 aatagctgtc gcgggcaaaa gtcaggcgta gctttaaagc atgcggcaca gcatggagca
     1081 cacgttacct caaagaagca ctgtccacct caatatttta gaccctgtta tgtcgccagg
     1141 aaactatctg ccaggtgtca gcatcccttt tcttcctcgc aagcgcaggt gcctctgcgg
     1201 taactctttt attt
//
LOCUS       KCKM01002605             962 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40887apa ultra-conserved element locus
            uce-1748, sequence.
ACCESSION   KCKM01002605
VERSION     KCKM01002605.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 962)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 962)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..962
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40887apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>962
                     /note="ultra-conserved element locus uce-1748"
BASE COUNT          299 a          161 c          167 g          335 t
ORIGIN      
        1 taacctccat ttcaaatgaa cagcacccac taacaagcca tttgttactt ttacttacat
       61 atggaacctt ttcactggcg ttggttcaaa tgccctgtgt ccatcgaact ttcataaaat
      121 cacaaggtgt caaaaaagaa tgtttataaa ctaatttgca ttactcatga tttgtgactg
      181 tgcaagagag aactcatagc catatttagt gtgggggagt agaatgggga aaactgggag
      241 taggcgttat tgttggctca attccacaca taccaaatgt gaatacttat gttcttccca
      301 caaaacatta atttcttcac atactgtaga ctttattctt ttaccgtgtt ccagatagca
      361 gacagctctt gtttttcact tatgttttgc tcttaacaac agtcattaat ttactgatat
      421 gctgtctatc agaaccacat catcttgatt agagctgtta tcctaatcaa aaggctgata
      481 attaagacta tccatctgta gagttccaag tgctaagatg agctgaagat cctaattaag
      541 attatttagg tgttacttaa atgccatcat ttgattcagc taatcatacc agcaggtaca
      601 ttagatttgc attaatgttc tgctgaagcc agcagctctt taaacagatc aaaaatgtag
      661 attacaggca ccattttcaa acatctttat attaatataa cactgagaca atgcattgaa
      721 gtaaacgaaa tattggaaaa aagaagcaat tttggtgttt ctcaatctgc tttatgataa
      781 tcagtagagt atttaagatg agtttattga gtttgtgtgt tatagcagct tgatatttaa
      841 gttttggctt gtgttttaaa agtaaactgt atggatgact ttcaatttaa tgtgtgtttt
      901 tctagcctaa atgaattggt acactgtgtg cgtgttcatt agttcttgct gacaaattat
      961 ta
//
LOCUS       KCKM01002606            1069 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40903apa ultra-conserved element locus
            uce-6754, sequence.
ACCESSION   KCKM01002606
VERSION     KCKM01002606.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1069)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1069)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1069
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40903apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1069
                     /note="ultra-conserved element locus uce-6754"
BASE COUNT          295 a          234 c          229 g          311 t
ORIGIN      
        1 ttatttgtgt ttctgagctc ctgtgtattt gaattgtttg ctcatctacg aaggctctcc
       61 cttatcttat tcctggttgt gttcatcagc tgagcgagcc gcttggctgc agatgtattt
      121 cataaggcaa cttcagtaaa ctttatttca cctgcctcct aaggccctgc ctctgcccct
      181 gagaagatca gaaatatttt gatttaattg ctgaggataa attacagcaa cacaaagcca
      241 gcatcctgct cgctccgtgt gcgtctcttg ctgcttggtc agcacaggtc cacgattcca
      301 tttttaaatc aaattatgct tgtgataata ttgtcttgag cttacagttg ctgacatgga
      361 tattgacaaa ggcttagcca gtattttaat aagaaaacaa aatacaggaa atactctgga
      421 gtttccaggt ggatcattaa caagacgcct tggagggctg agactgccag ccagcacagg
      481 gaatgcatca cagttcgtca tacaacttaa acttcttttg acatctagtt atgtcgaaat
      541 gtgactgatc acctaggggt ccaggctcct gtgagggaaa agttcactga cagacagcga
      601 acgaagctga tcttaaatga gaatcaagag aaagcagcat tccagcgtct gacagtctgc
      661 agctgctacc tgggtctgcc taacgaagac gagcctgctc tgctgaacag ttatattagc
      721 atctgtatgc ttctgtctca ttatcacaca tctgcccacc tttattcgaa tgaagcttct
      781 tctgatctga cagctcaggc attgtcagtg aatagatatt atgggagccg ggtacagcag
      841 cttagggtgt tagcttttat tttctaaaga ctgttgtaca gtttgacagt ataatgccac
      901 agaggtaaag aagataatta acatattggg cagtttctaa acaaagctga gacagttata
      961 ctggcaaaag tgctgctgct agagcagtat tgtttgcact ctagaaacat caaaggcttg
     1021 caagatctgc ctttaaatgc aaacaggtac cacctggtcc ccacaccac
//
LOCUS       KCKM01002607             775 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40919apa ultra-conserved element locus
            uce-6484, sequence.
ACCESSION   KCKM01002607
VERSION     KCKM01002607.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 775)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 775)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..775
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40919apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>775
                     /note="ultra-conserved element locus uce-6484"
BASE COUNT          261 a          141 c          134 g          239 t
ORIGIN      
        1 aagactcaac aactgtttgg aataaaaatt taaacactgg aaaaaaaaga acctcctact
       61 tatattgaac agctttcatt gacacttttc tggtgtaact ataactggct ccctttggca
      121 aacataacga ctttttgaaa ccatttttta gatgtatgca tttctcttcc ttgtagccaa
      181 taaaatataa atagcatttt catggtgacg aatgacatgt agtacagtat tctatgatca
      241 tggttccagg attttatttc ttttaacttt gtatacatta attaagtata cacaatcagg
      301 gctgagtgca gagacagcta aataaacaaa tgacactgta gaaaggtctt tctgcatact
      361 aatcatatcc tacatctgca agcaaaagct ctataaatcg atttgctctt tcacatcaaa
      421 agacaaacag tgaggcaagt cagcagttcc tttgtcaaag tcacagagat tgctgttctt
      481 cacaaatgca tttctacaga gctgaattca accatttgat gattagcatt attggcaact
      541 cttcaaagaa gattcatcaa gtaatttgca attggattgg ttgccatttt tgtgattcta
      601 ccccatgaaa ttgaacaaaa aatgattgac gtttgaattc ttacttggag gacaaagtga
      661 acttgcataa gaaaaagaag caatcagatt cccaagaggt taggaggcta ctgtgatgtc
      721 tctggtgatt cccacatggg ccagatcaga ttggtctaaa acgaaacgaa ttgcc
//
LOCUS       KCKM01002608             813 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40935apa ultra-conserved element locus
            uce-5307, sequence.
ACCESSION   KCKM01002608
VERSION     KCKM01002608.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 813)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 813)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..813
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40935apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>813
                     /note="ultra-conserved element locus uce-5307"
BASE COUNT          258 a          116 c          158 g          281 t
ORIGIN      
        1 gattctgcca gaagagtgag aagattacat agccacataa attcctattg tggcaatgct
       61 actctgtgta tatacacgtg tatgtttctg cttcattata tattgctcac ttttaagaaa
      121 gtgaactcac tctgagaatc tgtcatttct atcctgtatt gtaagtaaca agcttcaaag
      181 tcatgttctg gtcacagctg cgaaaagcaa ataggtttgt gttcacgaat aagagaaaat
      241 actagttttt tatgtgatca ctgtgttcgc atcaacccga aataataata aatggtaaaa
      301 ggcaaaatag tggtgaaaag ggatgataac ctttcaaaaa gtatattata tcatttggca
      361 gacacagttg tgaacattag tcatagaaac ctgcagatag tagaggctta atatcaaagc
      421 taatgattta ttttatgtta atgactttct gctagggcat aaaagactgc tcataatgga
      481 ctctcagtgc tgtgttcagt tgcgaaggct aatgggataa gcctacccaa aattaagctt
      541 tctgaagtaa atcatggtgt tatttttgca agctaactct tgaaaatgta ttggcaaact
      601 gttttttaaa aacttcttgt aatttttata ggtaaacgta aggcaaggtt ttttttcttc
      661 gttagaagtt ttcttaatta tattggaaat gtcttttcat gttttttcta cagttctgag
      721 gaataatatt catgatgtgg aagtcattca cttcagtggc agtaagtttt tgtgaagcat
      781 attttttgcg ggttgaacaa aggaaaatga gta
//
LOCUS       KCKM01002609             631 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40950apa ultra-conserved element locus
            uce-2817, sequence.
ACCESSION   KCKM01002609
VERSION     KCKM01002609.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 631)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 631)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40950apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>631
                     /note="ultra-conserved element locus uce-2817"
BASE COUNT          197 a           99 c          116 g          219 t
ORIGIN      
        1 tctagatgaa gatgttagca taaagtatgg cagatgtgct taaaccttat gttcctatgt
       61 agttgtatcg gccaatgatg acttaatttt tctttgagat aaaatgtgca gctccgtgtt
      121 atagcttgat gtatgtttta aaagccaaat tcctgtgcat ctttctttaa agtgacagag
      181 tttttatcaa agaatataga taattaagtg ctggaactga aaaccctctt cacatgaaga
      241 attctgctga ttttatgtgt gtgattgttt acggatttca ttctccattt gctcccaaag
      301 aatacactta aacactcaat caatgaataa cctacagcag tttgttgtag attcaataat
      361 ggggaatggt gcattgtacc aggatagtca gatataccca tagggagtgt cagtggtcaa
      421 aatgcttcca ttgccagaag gtagtctgaa aatggtctag aaattcaata cagcattgac
      481 cctacgttgt atacatgatc tgcagtcagt ttctcaagtt tacttgaagt tttaaaaaca
      541 gccattttat ccctaggatt caaaatatat ataaatacat attctggatt aaaactattt
      601 ttctttcttt aaagttgtag gtttaagagg t
//
LOCUS       KCKM01002610             975 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40966apa ultra-conserved element locus
            uce-2432, sequence.
ACCESSION   KCKM01002610
VERSION     KCKM01002610.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 975)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 975)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..975
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40966apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>975
                     /note="ultra-conserved element locus uce-2432"
BASE COUNT          298 a          185 c          189 g          303 t
ORIGIN      
        1 ttagttggtt aagattgcca tacaattaga gatataataa aataggagct taagacctac
       61 agaacgttag aattacaaga cttacaagga ggaggtgtgg ggatgtgaca gagattgggg
      121 atgactagac tgcagctgga tgtcaaaaaa gacaaaatga ttccttgaaa aaacggggct
      181 ctgttaggac atgggaacta atgtatgtgt caatccatta agatttagca tttttttttt
      241 cttttaggca caggaaaatg aattgcaaat acattaacaa ttgatccata aaccattacc
      301 gagtgcctcg aaaaggcatg tgaacaggat tagtatctct tgaaatccac tgcccctcct
      361 ggagcttggc gttgagcaag ggaggcgctt tgctctcgaa aatctaacga ccggttttgc
      421 aatgtcacca atttttttca atcatccaaa taccaccaat tcaattaagc tcataaactt
      481 cctacccata gttctccagg ataagcagct ccatttaaaa gtgaatgtgg acgagcttgt
      541 gctgtccatg tgaaatattg ttcaatcaac agccaaagtt ttacttgtca gttttgatat
      601 atccgataat agctgtaggt tgttttgcaa tgtccaatgt tctgtaaaga tgggcttttc
      661 atattcttta ttgttttttt ctgacaaaat gttgcctgga cttttgccgt tttgtgaaat
      721 gaaacaacag taaaaacaat atataattta accctcgtag acctagctgg actgcagata
      781 agcatctttc ccaggcttat ggctagtttt ggccaggata taatgagttc ctgttcattg
      841 atcccttata agcatcctca gtgattgaac ataaccccat gcacagcagg cagtcattca
      901 tttgtgcccc ttttcagctc tgttttaatc agcatttgac actgttgaaa atcaaatcca
      961 taattaagct tcaca
//
LOCUS       KCKM01002611             637 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40982apa ultra-conserved element locus
            uce-7410, sequence.
ACCESSION   KCKM01002611
VERSION     KCKM01002611.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 637)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 637)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..637
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40982apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>637
                     /note="ultra-conserved element locus uce-7410"
BASE COUNT          176 a          141 c          146 g          174 t
ORIGIN      
        1 ctcaccacag acacccacgg gccttgtcca catggtgccc tccctgtata agaagccaca
       61 ctgcacttgc tttttttctc aagtctatag gatcgaatca ctgcaaactc acgtgttccc
      121 ctctttgtct ttcttcctgc cacgtctcag gcagcagcag caataatcat tccaggatca
      181 aaatctgctt tctattatcc agctttggtt gatgatgatg tatgaagctt agagaaaaga
      241 gacagcttga ttttcatagg ttgggtgttg accctgctgg gtttagtgta gcatgaaact
      301 agttttgact agtaaactga ataaatatgc cagggaagct gtagaggggc aatatatatg
      361 caacactaag gtgccatttt tagaaaatga ttttgattct tcagagggtt aagctgatgc
      421 ccggtgcatt agaaaacctg taaacaggag ctcagggaaa tattttgatt cataatctgt
      481 ttgcaggaaa tagcttcgtc tcctacatca aaatgtggaa ccatttggca gagcagctca
      541 ggtcaaaatc cacaggacac agtggtgcca gtcagcccaa gggatgcagc aggaaggtga
      601 acaaaggcct ctctgctgca ctgtcgggtc tgccaga
//
LOCUS       KCKM01002612             531 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 40998apa ultra-conserved element locus
            uce-5779, sequence.
ACCESSION   KCKM01002612
VERSION     KCKM01002612.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 531)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 531)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40998apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>531
                     /note="ultra-conserved element locus uce-5779"
BASE COUNT          171 a           90 c           95 g          175 t
ORIGIN      
        1 aaccatgaga gaagtagaac tgagtcatta gttactcgag tatttaatct aaagcctgtt
       61 aacatgcata acattgatta actctcagct cactacattt aacaaaaatc tctgttgcag
      121 gttacttagt tatagaaaat ccatcaagta agttgattaa agatttttat attgtggtca
      181 tcagtgagtc tcaatgtgtg gttctctctt ctatgtttat tagaaaaaac ctccaagctg
      241 cgtataaatc ataaaagcat gactaattgc atggtaacag gagaaatgct ttctctctct
      301 ctggggtgaa gcctgcatgt ctgtgtttta gcttgggaag taatacaggg atatttaaac
      361 tcctccgagt ttaaaaacca tgtcattatg agaatgaggt caccacaata ttttatatgt
      421 ctaaaacctt gcagtgtacg aaatgttttc tgtgcgacaa agaagtatta tgtactttaa
      481 aatgcgatga taactttaca gatttccatt aatgtcaaaa cctcgccttg g
//
LOCUS       KCKM01002613             334 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41014apa ultra-conserved element locus
            uce-117, sequence.
ACCESSION   KCKM01002613
VERSION     KCKM01002613.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 334)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 334)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41014apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>334
                     /note="ultra-conserved element locus uce-117"
BASE COUNT          118 a           60 c           54 g          102 t
ORIGIN      
        1 ttaaactgga aaatgtatag tcatttcagc ttaatgtaat cctctttctg taaacaccca
       61 agatgatttt tttttcaacc agaacagtcc tgacatctca taagcctaag ggtgaatagc
      121 aagagattgt ttttgatagt tataaatatt caaaagacat gcagaccatc tgctttcata
      181 atacaggtaa agcaagactg aaatggtgac tgctgtataa aaatggttct tttaacaaag
      241 tcttcctctc ctcgaaaact ataaagacag atgtcaaaaa ctgtttacac agggtaatca
      301 ggagcgtgca aaatgtaata ttccttttac acac
//
LOCUS       KCKM01002614             986 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41029apa ultra-conserved element locus
            uce-2444, sequence.
ACCESSION   KCKM01002614
VERSION     KCKM01002614.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 986)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 986)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..986
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41029apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>986
                     /note="ultra-conserved element locus uce-2444"
BASE COUNT          301 a          182 c          203 g          300 t
ORIGIN      
        1 ttgcaaagag atgtgtaatt ttcatacatg taaaaaaaaa agagagaaaa aaaaaaaaga
       61 ggatcaacat agttttcaaa aagaagtgtt tccatgtggg aatatcatca gagtggagga
      121 ggggatgttg ggaaagctat tctggtcttc taagtttatt ttagtttggt acatctgtac
      181 aaatgcaatt tacctttaag cgtcattggc tgtcgtgtta agctccttgt ccaccgtgag
      241 gaaatcacca ttatagcttt catacgggaa ggaattcagg agtgccttgt ttacattgct
      301 accatttata aaacatttaa agcagctatt ctgctgaata aacattcgag gataagcgta
      361 tcgcttaaac ttcttaagac taaactttcc aaaccatttc ctgccagagg gacctagcag
      421 taaaaattgc aaactctgtg ctccgagatg agataggcag aattagatta agcagcttac
      481 tgttgacatg tctattgatc tgggttcagc gccgtttcct gtctctgcta gcagttagat
      541 tgctgtatac aataacacag tggcctggtt tatgtgaaat tgggggactc tgagcatcaa
      601 ttactccagg aaggcagtgg cactgggaga taaggttaag ctgctcacag tgtttaagac
      661 tgctgaaacc caagcaacat atttgctgtc taaattgctg cttataaatt tgacagcgtt
      721 ccatttatgt tgttgattcc cccctcccat ctccaaggag agatcaccct gtattattct
      781 ctgcaggtag cagttctgtt ctcattataa acatgcattg ttcgttactc ttcccttcct
      841 atcagccctt tgttaaaaag ttcctaagag tcacctggat gtttgaacag aaaatagtta
      901 gacaggagag agaaaggcat gaaatgttat agaaactacc tgtaataaac taacaaaatt
      961 ttcacggtca tattgattct ggtact
//
LOCUS       KCKM01002615             757 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41044apa ultra-conserved element locus
            uce-6169, sequence.
ACCESSION   KCKM01002615
VERSION     KCKM01002615.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 757)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 757)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..757
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41044apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>757
                     /note="ultra-conserved element locus uce-6169"
BASE COUNT          227 a          146 c          177 g          207 t
ORIGIN      
        1 tggcttgctt gagtgttatg gctgctatag agtatcagtt ctaccgagaa tgtgtttgac
       61 agcagccaga caggttccct ctgcagaacc ggcacgaggc cggcatctga gttgctactg
      121 cttgaaattt gacaaggcgt ttctccaaaa ccggtccaaa ggttgtaatg gccaagattt
      181 atcctcataa ttttggtctt ggcccattgt ttagcctgca gacatgctgc tggtcaaagc
      241 ttttcaatgg gatgtgagcc atagactttc tcagtcatca tcgctgagtt attttgctac
      301 tcagctatgc agaagcagca ggcctttagg ctaattaata aatcatcaac gcatttgtgg
      361 tgtgaaaaat gaaatattta tgcttgccag agtaatattt ctgtcttgca gccccatgct
      421 ctgttgatgc ctgatggagg atgaagtaaa taccagctgg tgtagaatga gcagaatata
      481 attactttct acaaagttaa ctgaatatta aaaataggaa taagggaagc tggcaaggaa
      541 aaaaacatat acatgcctga aagacacagc atagccaata catgaagagg acacttgcct
      601 aactaatgcc atggggataa agaacctgca ggatccatat cgtgtacaaa agtgtcacac
      661 agaggtcttt ttacagagca gttagtgacc agctggagta gttaaaaggc ctgaagggaa
      721 gccaaggatg ctttaatgtt ccagtcggtc atcatta
//
LOCUS       KCKM01002616             712 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41060apa ultra-conserved element locus
            uce-8032, sequence.
ACCESSION   KCKM01002616
VERSION     KCKM01002616.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 712)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 712)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..712
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41060apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>712
                     /note="ultra-conserved element locus uce-8032"
BASE COUNT          182 a          180 c          141 g          209 t
ORIGIN      
        1 ggtgcattaa aagctgtaca tataaaccat gaaacctgtg agacacaacg tgccttcaca
       61 gttcaaagct tcattcacca ttttgaaagg cattcttgcc agcctgcttc acgctgaagg
      121 gcaccacact atgaacagtt gcatggcaag cacaggctta ggagagggag tgggaaaaca
      181 cacaaatgga ccgtttttaa acaacaaggt tatgcatggc ctaaggaact ctttgtctag
      241 actaggctac acactggggt aggtacctct tctttatcag cctcaatttc ctggtacaac
      301 aatccatatc tccggttagc aatttcatct tcagataaat ctgagttgtt ggtctcattg
      361 tctttgggac tagttgaact ctcggtgcta gcatttctgg aatttcccat ttgaaacaga
      421 gccaagggcc tagctatctc cttgcttggt ccaggattgc taatgtctgc ctgctcccca
      481 ggcaagcctt gttttactga tgcctcctga cttttattgc ttgtacttgc acctacttct
      541 ccccagctgt tatcagcccc tcctatgtct tgtgtcgacc atttatcact aatgcctaac
      601 caaacgtttt ccaagttacc ttcctctgag tcttgctgct tggagaaaaa aggccaatta
      661 tcaagtccat tggcttggcc atctgacaga ttagaaaacc cccaggaatc at
//
LOCUS       KCKM01002617             344 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41075apa ultra-conserved element locus
            uce-4724, sequence.
ACCESSION   KCKM01002617
VERSION     KCKM01002617.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 344)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 344)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41075apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>344
                     /note="ultra-conserved element locus uce-4724"
BASE COUNT          126 a           63 c           49 g          106 t
ORIGIN      
        1 gtaatttatc atttttctga tttaatacca aagaaatata ttaaaataat aaaaagaatc
       61 ctgaaatcct caaaatttgt agtgataaat agccctccct gtctttattg cattatgcct
      121 actaacagaa atattgcatg gtggattttg ccagacaacg acgattattt tccaataaaa
      181 agttgcatat taaattccag cacaaaagtg ggtgtctaat acttttgaaa tcttttatgg
      241 tttgccaggg aacacaattt taaacttaac taatacaaca tcacggtgaa gcgaaccagc
      301 attaaagctg tctttgtaca accccaccca tctaagcaga aaag
//
LOCUS       KCKM01002618             953 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41090apa ultra-conserved element locus
            uce-491, sequence.
ACCESSION   KCKM01002618
VERSION     KCKM01002618.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 953)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 953)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..953
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41090apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>953
                     /note="ultra-conserved element locus uce-491"
BASE COUNT          290 a          173 c          175 g          315 t
ORIGIN      
        1 taggttaagc tgttgtaaat taaagtagct ctgctgagct ttttgcagtt gttcgggttt
       61 tgtgaatgtg agaggagctg gtgactggtt ttcttacatg tgagtaaaag tgagtggggt
      121 aacttcatag cacagaatat ttcttgttag gagtctttct gtgtgtactg caagccagac
      181 agacctgttg tccccttaca agctgcaaat tacacaggca aatgtaatta cccattctct
      241 ttgttattag tgtgcagcta ggaagcttca agcaatcgtc cctttcttgg tatttcaaag
      301 cttactcgca agatgcatcc ctgatatcga acacaatgag atgtcctttt ttttttttta
      361 aattcaatta aacatttgcc tactgtgact ctttattcac tgcaaattgt ctctgtaaat
      421 aatcttcatc aaaagtcaga accaatcccc attagttgtt tagattaatt aatgagtccc
      481 cctggagcca cccaaatgaa ttcaatttaa acgtcaacaa cttggctatg gagtttccca
      541 ggttggcatt aagacaatat taaacctgca ataagtcaca tttaaaatgt taattcaaag
      601 aagctctcca tttagagcat ttaattaaat ccttaaataa actgcatggg ctcaatacca
      661 gatggttctg cattttcatt gcagcagaga gccttgaagt cattgaggga agtaatattg
      721 gaggcatggt gaagataacc aggatatata gtgtaataaa atctaatctt gtttccagca
      781 gggagattca gtgtatgtac acaacctagg ctaaaattgt aagttaatta cattaacccc
      841 agtgtactct ggtatctgag cagccagaga tgaaattagt ctttttccta tcataagatt
      901 cttttcaact tcactatatt aatttttagc caaatactta ctcataagga aaa
//
LOCUS       KCKM01002619            1040 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41106apa ultra-conserved element locus
            uce-680, sequence.
ACCESSION   KCKM01002619
VERSION     KCKM01002619.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1040)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1040)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1040
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41106apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1040
                     /note="ultra-conserved element locus uce-680"
BASE COUNT          355 a          207 c          200 g          278 t
ORIGIN      
        1 attcagaaaa ctgcagaaaa taaaaagaat atccaagcga actgaaggag cataggaaaa
       61 ggaaatagct gaaataaatg gaacaaaaaa ggaattacaa aaaaaaaagt atataaactg
      121 aggcttgaaa ctgctgttat gaaattagta cactagttta tctttgctag ttcagtaaag
      181 tttcctgtga ttggagtata gttatattct atgtcaacat agacagaatt ctagtcctgc
      241 tttcgttgcc actgttgcac aatgggtttg tattatccca gggcataaag ggttccataa
      301 aaggtacatg gaagaaaatg gaaatccagc accgtttaag gaaatcagtg aataaattac
      361 aaaaactgtc catttgcctg ccccttttaa tcttactgtc gtattcaaac tattgggcat
      421 gtaactgaat atctcaactg tacctgaaga aataatggag cgtgtctctg cagtaaaaca
      481 gaacggcact aaactgatga gtttaaccca gcagaaagag cggctgtaaa catgacaaat
      541 gcctgctatt gatttcaggt ttaattactc tgtgcagcac tgacaaagcc catcagatgt
      601 tgttgtgaag tgtaaatgga acaaactaca cttcactgcc cataggaaac tgatggtgtc
      661 tgcagtttgc attgtttact ttatcctcca taaacttcag ccttgatcaa attaacaagt
      721 gctactaacc tccaacaact acaatgcact atgattttac tgcaacagcc ttggaacaat
      781 agttctgcag catttcattg ataacaaatg tctggctaat gacagcataa tggcagctgc
      841 caaaccttcc tggccagcac tgcatgtcct ctaaccaggc taccaacaat ttttaacccc
      901 ttttggggca aaggttggat tactcaacat tctgatgaaa ttttcagtta caatgtactg
      961 cccaggctaa cacggaaacc tcctcttccc ccgcaaaggg aacgaaaagg gaatgaggca
     1021 gagagactta caggttagaa
//
LOCUS       KCKM01002620            1132 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41122apa ultra-conserved element locus
            uce-752, sequence.
ACCESSION   KCKM01002620
VERSION     KCKM01002620.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1132)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1132)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1132
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41122apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1132
                     /note="ultra-conserved element locus uce-752"
BASE COUNT          358 a          198 c          155 g          421 t
ORIGIN      
        1 tacatgcttc attttatatc ttgaaaacat aaattatgac acaaagtacc agcatttatc
       61 aatagggaaa cactaagaca tatgcaacaa gaagaataac aaagtaacaa agatatacct
      121 attttgtatc atgactcctg ttttctctgt ttacagtgga atttaattca ttattattaa
      181 tctatctaca ctttaattaa tttaatataa cagagtgctt tgctgtgtaa acatagttta
      241 cagaacttca cctttgcagc tttttttttc attattggac acttctccaa ttacatgtaa
      301 acattttagg aaagattaaa gtaatttcta tttacagtta gtggaaaaca agctgtccgt
      361 actcctgctg tagtggagat tataggtgat atataatatg ctacaccata tgtttaaagg
      421 ccaataatgc aacttctaat ctcactctgg ctaatcaagc tgctcagatt attttacata
      481 catctttggt ttaggccttg acatgccctt gtttttcttt cttctcaaag ctaaagttcc
      541 cctctttgat tagctgaaac atttgcatgg tcactacaca tttttcattt tataaatcat
      601 tatgcattag cagtcttgat cgcctagctt gactaatcct gatgaactga aatcacagtt
      661 gaaggtcaaa ctccatccca ctgcacattc atattcaaac aaatctgcac cattgttcat
      721 tagacttcta aaatcattga aaagaagtta ctgaatatct tacccatatt ctttatgttt
      781 tcccaaactt tatctatgaa atgttaatgc ttaacagacg ataatagcag aataatgtca
      841 aaatcaatat tggattgctg ttagagtgct taattttatt ggaagttgta caacctagat
      901 cttaatcaat acatgtgtac aatcagaata tttctggtgt ttcactgatt attttcctgt
      961 gttctattta aacaacacag gtatgccttg tattattgtg tattttaaat gtagtgactt
     1021 ttattacaat tatgactcgg ctttattctg cataaagcat gctgtccagt tttacattgt
     1081 taagacatta attttctact cctgtgataa caattagggc tatttatatt tt
//
LOCUS       KCKM01002621             940 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41138apa ultra-conserved element locus
            uce-3869, sequence.
ACCESSION   KCKM01002621
VERSION     KCKM01002621.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 940)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 940)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..940
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41138apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>940
                     /note="ultra-conserved element locus uce-3869"
BASE COUNT          230 a          179 c          177 g          354 t
ORIGIN      
        1 ggaataaccc ctgatttcat cttgtttttg tcttcttttg aatcctaata atggggggaa
       61 aaagtctgtc ttttaaaata gaagtgtaac agcactgata atacttggtt ttgttttttg
      121 cagtggagtt tggataggtt tttttccctc tcctcttcag gaagaattag acataactgt
      181 gttttatgat tagatactaa tttgaattaa ttttgttctt gttttgtttt gtgtgcctat
      241 ttttcttctt ttgaccattt tcttaattta taaggtgtgc accttctcca agactgactt
      301 ttaccttgag tcctcttgtt ttgtttgata agaactttta cgttttttaa attttctttt
      361 taaacaactt catagatcta attcttttgc attttcagat cttaaagata catatcttct
      421 gaaaatattc atcatccccc tttctttggc ctctcttttt agtcttttct tctgtctcct
      481 atcttcttct taggccatgt ttgccagcta cgtccctgaa atcatagagt taataggaaa
      541 ccgcaagaaa tatggtggtt cctatagtgc ggttagtgga agaaagtaag tatcccaaga
      601 ggctctgctg cctctgctgc agtagaacac tctctgcatg ccattttctt tttttttttg
      661 tgtttttgtt tcatgcatgt aggcaatgtt tgctcgctac gtgccagaaa ttgctgctct
      721 catccttaat cggaagaaat acggcgggac ttttaactca acccgaggca gaaagtaagt
      781 caaaaaagac caggtgtggt tgtgtgactt taaagagccc ctgaaggtgg taatagctga
      841 ctcacggctt acaaggctgt actacttgac atcagatgtt accactggag agttgtcaca
      901 ctattagaga cctgggctat gccacggtac aagtcgcaac
//
LOCUS       KCKM01002622             293 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41154apa ultra-conserved element locus
            uce-5075, sequence.
ACCESSION   KCKM01002622
VERSION     KCKM01002622.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 293)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 293)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41154apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>293
                     /note="ultra-conserved element locus uce-5075"
BASE COUNT           94 a           50 c           56 g           93 t
ORIGIN      
        1 aaaattgagt ataaataaca ctttgcaatt atgagtgttt aaattccaaa ttttttaggc
       61 taatcacttt caggaacaaa caggagattg aatttatatc gcctgcagtt gttattggaa
      121 aggtatgccc agagattgct aaatgaagtc agtcccagtg caattatgat cactcaagca
      181 tgctttcaac gtatcgtgcc aaattaggta gatttgagca atttgacttc ctgtaacaaa
      241 tctctggggc acttttgaga aagtacagac tgtttacaaa cactctcggg ttt
//
LOCUS       KCKM01002623             953 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41170apa ultra-conserved element locus
            uce-4456, sequence.
ACCESSION   KCKM01002623
VERSION     KCKM01002623.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 953)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 953)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..953
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41170apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>953
                     /note="ultra-conserved element locus uce-4456"
BASE COUNT          278 a          178 c          165 g          332 t
ORIGIN      
        1 ttttagaaaa tgatttccta ttttgcataa attttaacac ctgttaattg cggttgcttt
       61 tttcccttct cgctgtgtca cattagacac cctggttatc aaagtgatcg tatcactatg
      121 gtatgtctca taattatgat caaactgtta tctaacattc ctggagcatt ctttttttca
      181 atacttaata ccttttattc cttggcctca tgcatgaatt atgctgtgta tgtgaagagg
      241 cttaaagttt gtttccatta cattctttct gaatggatcc tgttgtatct aggatttttt
      301 taaagccaag taggaatgtt attgttgacc ttgacaccag ataactgggc agacattata
      361 tagctatgtt tgaatcctca caaaatgtga tgctaaagcc aacagaatcc tggcgtgaga
      421 ctctcctgga cagcagagtt atggagcttt tctttacagt aagtttcttt cttcaacttt
      481 catagtccag accacaggga aagcagctcc ctcctgttct aaaactgtgt tgttggactc
      541 ttccttttgc atcaggtagg actgattctg tttaacttca gctcggttat caaagcaaac
      601 agaattattg tatttctcct aggttgccaa acacgtattt tgcctataaa ttgctttaaa
      661 ttgatgacca ttaacaaaag cgaaaggttt gtagttagct aaacatctat atatttaata
      721 cttctgaaca tgtactcatc aaacaaaacc aagcatgatg aggagttacc agagtatatc
      781 tttaagataa ggtgtaacag ctctccaaaa agataaacga acagtctatg tttgctgatc
      841 ttaaagcatt tgctcaatgg aacagctgaa aataagtaat gtagttgcag ttttctagct
      901 agttttggca tgcagaattc tgcatgtctt tccttagcac aaagtaaatc caa
//
LOCUS       KCKM01002624             692 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41185apa ultra-conserved element locus
            uce-7739, sequence.
ACCESSION   KCKM01002624
VERSION     KCKM01002624.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 692)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 692)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41185apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>692
                     /note="ultra-conserved element locus uce-7739"
BASE COUNT          193 a          178 c          148 g          173 t
ORIGIN      
        1 caccctctca tcatcagaca ggactgaaga aatcctcccc tctcatccca cccttggctt
       61 ttctggagaa accccttcca gaccagagcc agagaaactt tgcatcttca caccatttgt
      121 tgacataaaa cccatcccct gccttacttt tgtagaggca ctcggggtgg ggtggaagcg
      181 gggggaacgt ctgtttctat ttgaaactgt caaaattagc attcagtaat taaaaatcac
      241 accctttctc ttaataacct aaccagcatg atacaatcag gttgtgccaa ctctttaatc
      301 taattgacta attacagatt ttaatttagt cagttactga acaactgttg acaatttgtt
      361 ttcattaggg acagaacagg ataaatattt aggctcccca gtcaaagacg aagacataag
      421 ctccgggctc tgacctccgg tttcgcgccg gcggcttctc cattggcatc acccatggaa
      481 aggtgccgct cggaagcacc ccggtcccac tgttgggcag cagaggttgc tcccgttgcc
      541 acagctgata tcatttaaaa tataaaatta aaactaatac agctttgcaa ggggagtttc
      601 agggacactc aggctctcaa gcagagtggg cacaccagtc ccctaaactg ggagggaagg
      661 ctgagcccag catgctgcca ggaaagggaa tt
//
LOCUS       KCKM01002625             312 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41201apa ultra-conserved element locus
            uce-7299, sequence.
ACCESSION   KCKM01002625
VERSION     KCKM01002625.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 312)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 312)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41201apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>312
                     /note="ultra-conserved element locus uce-7299"
BASE COUNT          104 a           41 c           56 g          111 t
ORIGIN      
        1 cctgacagga aataaacatt aaaataatct ttaatccctt gtctggtcta ttaccattaa
       61 caattgatgc actttaattt tgtgggattt taactacaaa atggaatggc taagtagtga
      121 taattgggtt tggaattata cggtcattta tatcaacaga aatgcaagtg gctgggaggg
      181 tgattaatta tttaacattt cctggctgtg gttcctatta tagaattttc tgatatattc
      241 tactgtgaac aattatcacc aaatgaggat aaacaaatct gtgatgtgaa gtcttattta
      301 taaattaagc ta
//
LOCUS       KCKM01002626             934 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41216apa ultra-conserved element locus
            uce-3703, sequence.
ACCESSION   KCKM01002626
VERSION     KCKM01002626.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 934)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 934)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..934
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41216apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>934
                     /note="ultra-conserved element locus uce-3703"
BASE COUNT          231 a          161 c          194 g          348 t
ORIGIN      
        1 caagaagggc atcttgactc tttatttaaa ttgagactga tgtatcagtc catgatcttg
       61 ggctgcaatt taaaatggta actaatgaca attaaaaata gtagtaaaca tcttaataat
      121 tgtactggtc tagcttctac gcaaatacta aggtgagggg gaacatttga agtggctgat
      181 ataatcttta actacttttt gtgcactagt gcagtaaata ctgtcagtta tgggaaagat
      241 gccccgagac aactgacgtc tgttccattg atcaagatgc aaagcaaaac caattcagaa
      301 atagttacca actggaaaaa gttttgtttg ggcctaacaa aataggtgct atagcagtct
      361 ttttcttttg tttgcttgat cactggaatt ttgttaactt tgaatgcatg tctttcactt
      421 aattgggtca tgttttttct aaaatttaaa tttttcttct tcctatagcc ctgccatagg
      481 acaggctgag gcagagtctc agtgttgccc tgttcagtct gaggcaagtg ggatttattt
      541 tattcattct gggggctttc acagctttat ggctgttgga tatttatgtc cccaaacttg
      601 cagcaagttt ggtgaaggcc cctaaattta ttttaattta ggttttttat tctcttttgg
      661 tagatgggct ctatattaat atttaccttt ttattattgt tgtgttttta agagtcttag
      721 ggggagggac catgttttaa gctgtttggg tactttttaa ctgaaccttc aaggctgctc
      781 aggtagtcct tcagccacac tgccccctct ccctcttctg cctcaccttt gtgctgcttt
      841 tggttttggt attgtgactt tgtgtagtct ttgaactggt ggcatgtaaa aatcagttac
      901 taatgtttcc tcttctgggg agttgtatct gttg
//
LOCUS       KCKM01002627             943 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41232apa ultra-conserved element locus
            uce-2163, sequence.
ACCESSION   KCKM01002627
VERSION     KCKM01002627.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 943)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 943)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..943
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41232apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>943
                     /note="ultra-conserved element locus uce-2163"
BASE COUNT          268 a          182 c          189 g          304 t
ORIGIN      
        1 gcatagtttc atgttcctaa tggaataaaa atgatggtgt gctgcttttt actaccattt
       61 cttcatcctc caaaacagaa aaacaataga cctttgcctc agagaaatta tagtggagat
      121 gaatttggcc acatataatg agatgagcat tcttctcttt taaactgcac aaaccttctc
      181 tctttccaat caaaatttta aactgatctt tctatagcat ttacattgat aagcaagtgg
      241 gcttttcaat aatttaccca tgttgctgca aagaggcagg ggaaggactg gaagtttaaa
      301 acacgaagga gaaaagttaa tttaaagtga tgtttggtaa aaagtcccct ttgagatcct
      361 gttgtgtaat tgaacagatt aagagaactg acagtaactt cacggtatgc ctaagtggag
      421 gtctctacgg gtcaactctc ggatcttgtg ccagcacgtt aaacaagttt gtcaattttc
      481 catcagattg atttttctca caggtctgga agcctcgtct catttcatct tatttccaca
      541 ggggttctta acattgcaaa ccgccattta cttttgtctc aaagtgtgag gaatgatttt
      601 tatctctgag tggcaatcac ggcaggcagc tccagctctg cttataatgt cgcgcattgt
      661 cctccctcac caactggggt ttcttttgtg tttttcccct cttcgggaat gatgtggatt
      721 ttcagaatgc attcaaaata attattaaca gaatgtactt agggcagatg tctgtagtct
      781 ctgaagtgaa caaaaaaagc aacagaaacc gtggggtttt ttcttggcag ttttcagcat
      841 aatgaggggt cagcttgaga aaatatgatg gctctgggaa ggtcacaggg aagagtatta
      901 acctctcttt acatttccat gtctattatc ccctcctgtt aat
//
LOCUS       KCKM01002628             247 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41247apa ultra-conserved element locus
            uce-7102, sequence.
ACCESSION   KCKM01002628
VERSION     KCKM01002628.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 247)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 247)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41247apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>247
                     /note="ultra-conserved element locus uce-7102"
BASE COUNT           84 a           40 c           45 g           78 t
ORIGIN      
        1 ccgctgtatc acattctttc tgcctgagag aaaatatcat tcctagtaat tttctacact
       61 tatacaatct gcgttgacag taaataattg atgtatgaat ttaggactaa actccaacac
      121 aatatgactt tatgtcaagg gttactccca gcagattttg agctaaatca tcttgcaaaa
      181 tggattcttt cagcggaaaa aggggggaaa aaaagctttt tgaaattatt ttaatggaaa
      241 gatggga
//
LOCUS       KCKM01002629            1007 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41263apa ultra-conserved element locus
            uce-6966, sequence.
ACCESSION   KCKM01002629
VERSION     KCKM01002629.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1007)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1007)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1007
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41263apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1007
                     /note="ultra-conserved element locus uce-6966"
BASE COUNT          296 a          183 c          178 g          350 t
ORIGIN      
        1 actaggtttt taaaggtgtt cactgtcaga accacgttag cttaaaggta aaatatctat
       61 tctctataca gcgctaaagt tttatcacaa gttggagatg tttaaagtga tcatttgttc
      121 atactaatat atcaaccaga agtgttttgt caggagtcta tcctgttttt ttgtggatgt
      181 ccttcatatt aataaacatc ctagcattaa taaggtatag agaaatgatt gatgtattct
      241 gtattattat tacactgttg gtaaccaagg caggggtttc tttttttcct tcttcttctt
      301 cttttccatg ggggatgaag agggacctgt ccctttttaa ccacttgctc tgaatgactt
      361 ttatacccaa tataagtgag aaaagaggat gaatgtcacc tctcttctct tcctcctcct
      421 gccgatgcgt actccttctt ttgattgaca gctactaata accttcctgc cctaagtgcc
      481 atggagacac tttattagga caaacagcca aggaaatcta ggaatgaagc caagcctgca
      541 gtgagttatt atcgggcttg tatttatctc agctttgtaa tttttttcag tgatatgcaa
      601 atcctgaaat agatcttctt ctgttgaagg acaggtccct ctgttaattg atccactgag
      661 attcagccta acctctttta gctatcagcc agggaaacag gctacataaa agagtctcag
      721 tgctgtacag agttcacatg aattcactgt gcattctaca aggaaaactt ccgcacagaa
      781 aatgcatttt tagttcctga acatatttta catatcagtg ttatctgcat aacagatcaa
      841 actgatttgt ttatttgttt attagatatg tatgagggtg cactcttata atcaaatgtg
      901 attttagatg gagttttctt tctttctgga aagatacacc acaagtatgt attgtaaaaa
      961 cacattaaat gaaattcaga cataatgaaa atgcatttgt tcaaaat
//
LOCUS       KCKM01002630             920 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41278apa ultra-conserved element locus
            uce-953, sequence.
ACCESSION   KCKM01002630
VERSION     KCKM01002630.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 920)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 920)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..920
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41278apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>920
                     /note="ultra-conserved element locus uce-953"
BASE COUNT          299 a          198 c          138 g          285 t
ORIGIN      
        1 tccgtgttcg ccctttgctc agcaatgcaa aaagataaaa cttgtatttt cttccctgct
       61 acattttcat ccctgatcac aacgcaaagt aaactaagct ctgacctaag aaacacctca
      121 acgcattaaa atttcaacag gcaatgtcag tgttacatta aacgaggact cctccagctc
      181 actgcagagc tgggatttga ataaaacgtt caatgttaac aaacaataca cacgtttggc
      241 actttgtgta ttaaatggat caaagacatt tgataaggca caatacacca tttgtacaga
      301 cctgattgag ttaatataat atcagcaaat tttacagcga aatgaatctg tttcttttct
      361 ttgtgtttaa aaccagcaca gattacaaat tttaatgatc tgaaaatgtt tggtatacaa
      421 aatcatgctt atttcagtat tagcaaaaac acaagaaatt tttcaacaca aacacccagc
      481 tgtgtctatt ttaaaagcag ttcaatgaca gcttgcactt atgagcatgc aatcagctaa
      541 tttcgctttt tttttcttct gtgttaatca acactttcct tcctgcatat cagagtacaa
      601 atagtatagt tactccacat cagtaaatgt ttacgtaacc tgtcctttct caagaatctg
      661 gttacaccga atcattacat gctagaccga gtaggaaaat gcactgggcc cagtcagcct
      721 aatgggatcc tagtgcacca taatgacaca tattagttaa tgatcatcat aataataata
      781 atatgcaggg atcttacctt tcctcttacc ccttgccatg gtagagtcaa gtcacatcct
      841 ccacattgca ctcttcctcg agaattccca tacttcgact tcagtgttga gcaatgaaat
      901 aattagaaat ttacgtgatt
//
LOCUS       KCKM01002631             835 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41294apa ultra-conserved element locus
            uce-4788, sequence.
ACCESSION   KCKM01002631
VERSION     KCKM01002631.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 835)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 835)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..835
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41294apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>835
                     /note="ultra-conserved element locus uce-4788"
BASE COUNT          244 a          149 c          178 g          264 t
ORIGIN      
        1 tccgaactgt ctggctttga tctcccccct atcaaaccag tgacagcctc ggtggggtgg
       61 tgggaggcag cgggagccgg cggtggcgtg tggcttaggg caggcacctt ctccccgcgc
      121 agtgccgtca gcctccgatc cgcggcgtga catcaaggca ggtccgcttt aattaggagg
      181 ctgagattat aatattatgt taaagaacaa agagcctccg aaggaaaaag aaatatgtgc
      241 cgcatatctg acaaagataa attggattat tcaaaatatt cctgatgaaa tgttacattt
      301 tgcaactaat tatcaatctg ttttatctcc ggagcagctg ggcatttttg tgcatgcaag
      361 acctgcctta ccaatgatct taagatgtca ctgtagcgtt tacatctttt atttcaagat
      421 ttaaataact aggaagtagc taatgtaatt cactgctgag aagaaaggct agttagttga
      481 atgctttcca aagtgatctt ctcctaatga acttctttgg actgtgagta ataaggcttt
      541 attcaaataa tgtttaagaa agagttttat catgtatttt aaagaaagag caatatttaa
      601 tacattgaaa atatctttat taatcctata ctgtctcatg taacaatgaa gcattgtgaa
      661 aatttggtat tgttcttcct gaatgctact tttgagatta acaggttctg gttgcaacag
      721 agctgtagaa atcgggcaat tatctcgtaa atgctcagtg atatcttaca aattacagtc
      781 tgacatgatt acagtgccat tttgctgtaa aagcatgtgt tgtttaagta tattt
//
LOCUS       KCKM01002632             998 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41309apa ultra-conserved element locus
            uce-1034, sequence.
ACCESSION   KCKM01002632
VERSION     KCKM01002632.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 998)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 998)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..998
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41309apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>998
                     /note="ultra-conserved element locus uce-1034"
BASE COUNT          284 a          203 c          156 g          355 t
ORIGIN      
        1 ggtaggacat ttcttattct tttcttttca cctttctgtg acccctaaga aatcacagtc
       61 ctctcacagt ctaatcagca tggggaattg cagaatgaat gggctggaaa attcctttga
      121 aaggcaataa taatattttt tcatatatga attccagctt ggttcttaag agctcaacaa
      181 agggaagtca cggttattgt ttttttaatt ttttttactc cttaatatag cttttcaaag
      241 gcacttgctt ctgcataagt tgtaagttta tgttaagacc tatgctaggc tgtattacac
      301 gttttagtgc attttgtact gccttgggag ctaacccccc tcccccaaag aactttttct
      361 cagccccttc atctgtaacc tttctgcaag taaatgctaa ttgaaaaaga aagaacacca
      421 ctaatcttgg aatttaaatg catttaacaa aaccaatctc aatctaaatt gttgtttcac
      481 cattcccttt tccccaacag atgtcgagaa actgcaattc ctattaagaa cacttgactg
      541 tttactcagc aagagaactt caggctcagg ctgcatcaat ctaaatgcgt ttcaggacgt
      601 cagtcttttg aaaagtgcag actgttagtt ggttattttt aaacgtaatc ttcacataaa
      661 agagttgctg cattttttct tttcactttg tcatccctcc tccctctttc ctcttttaat
      721 ttttttttaa tgatggaatc aaacatagat gtcctgaatt tttatgtccc attccattta
      781 agtttctccc catgctgctt tatttatttt ttttctctct tctttacagc tttgaccaaa
      841 aggaatattc gtgaagactg tgaacattat tgcaggggaa aaaaaatcca gaaatgttat
      901 gtagtaagaa tgttagacat caaaaacatg aatatatttt cttgctgagc tttacagtaa
      961 agcccccatg ggctttgacc acagacctgc gtaaagtt
//
LOCUS       KCKM01002633            1002 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41325apa ultra-conserved element locus
            uce-8044, sequence.
ACCESSION   KCKM01002633
VERSION     KCKM01002633.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1002)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1002)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1002
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41325apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1002
                     /note="ultra-conserved element locus uce-8044"
BASE COUNT          310 a          180 c          222 g          290 t
ORIGIN      
        1 agtacaatac ctcggttaga ctgctagagt ccagccacag taataagtaa tgacatttgc
       61 agcacaaagg cagctcccca acgaattggt gacaggagta aaaaggcaat ctagcctatg
      121 taagctttaa atgtggtctg aattttacaa ttacatgtcc taaagcccat tattagacat
      181 gaaggcaatg agaaggaaag cagtcattgc atcactacta acaccaatta taggaaacat
      241 aaatcattca aatttttgta ctttaataaa aatcagcctg aattggtgtt taaaaggaag
      301 aatctagtat aggagcctaa tgggatagaa gaaaatagag taattggagg ctgctgtctt
      361 ttcactttct atataaaatt atttgaagag acagccaaga actttaaaca gcagaaaccc
      421 agaaaagttg taatttggat gtcttcagtt gtgactttaa tggtgtttgc ttaaagagct
      481 ttcttttatc tctgcagaca tacttcaatg acaatatcct cacactgata cggacattgg
      541 taacaggagg agccacacca gagctggaag cactgattgc tgaggaaaat gcgttgagag
      601 gaggttacag cacgccccag acacttgcaa acagggacag gtgtcgagtt gctcagttgg
      661 ctctgtatga tgggccgttt gcagacctag gggtaagatc atgagcaaaa cataggacca
      721 aggctggtct gcagtctgtt tgttttctct cggacagaat aatgtctatt atttcattta
      781 gtggggcttt tggttcgttt gatgattcac agcatagggt gacaggtttg ctcttaccct
      841 ttttaagaag ttgtgtgact cgccagaccc cttgctgtga tgtttcccac agaaaatcct
      901 gtggatctta gttgtcaaca aaagcttgga cagtataggc aaataatcca ttgtaaacat
      961 gatcagtatc tatacttttg ctgggttttg ataagctgat tt
//
LOCUS       KCKM01002634             819 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41354apa ultra-conserved element locus
            uce-7788, sequence.
ACCESSION   KCKM01002634
VERSION     KCKM01002634.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 819)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 819)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..819
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41354apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>819
                     /note="ultra-conserved element locus uce-7788"
BASE COUNT          273 a          160 c          175 g          211 t
ORIGIN      
        1 cagatttatt acttgtttca ttacttatca aagacagtgg cttacgcacc ttgcactatc
       61 tagacagcag tctcttggga tgtcagaagt caaggttaca tcagctcctg actttatcca
      121 ggctgcatga tgtacaatgt caccgtaaca gagcacttcc tctttgttct ggggggaact
      181 cgattcataa tgagcccatc tagggtgtac tcagattgcg ataaagagct ctacacagag
      241 gctcccattt tagagaaaca ggtgttggct ttgattagag gaaaatgaca tcatccatgg
      301 gagaggagaa aaaaagcaaa gggaaaggaa ggcaaaaata gaaaaaagtg gcaaccagac
      361 acaaatacat ttgcacatat aaagctgttc taatgagagc caaattgatt tgacattcag
      421 tggcagtctg aagccaaaaa aagcaaagca gcctacaaaa ggcccagctc attgtttatg
      481 gagtgtcata cttcatcatc tgtgagacca ataacagtga tgggaagacc tttaaaagca
      541 gggagtttgc acagaatggc tgcgtggata ccgctgatgt cagatccaat agaatgattg
      601 tgagctattt cctgaactaa aatcatgttt gtcagataaa gtagttgctc tctacagatt
      661 atgtctttca gaggaggatt tggtacactg ctaaaattct tggctgattt ctcctacgca
      721 gacacagcca caatacccac cctatgattg gtattgatta tcaaactgcc ctgaagaaaa
      781 aacatagaac agaaaaaaat cataacttgc aaatgcagt
//
LOCUS       KCKM01002635             769 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41370apa ultra-conserved element locus
            uce-1622, sequence.
ACCESSION   KCKM01002635
VERSION     KCKM01002635.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 769)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 769)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..769
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41370apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>769
                     /note="ultra-conserved element locus uce-1622"
BASE COUNT          255 a          184 c          159 g          171 t
ORIGIN      
        1 cagcgatgat ggccatatcg caaagagggg aggtgtcaca tagataattt ataaaaagta
       61 aattaaaatg atttcttata taattccccc caagcaatat gttcatgctt acatatcctg
      121 ctactaccaa ggtttctgag cagcaatgcc aaaatggtag aaatgaatat attaactgaa
      181 ggaataaatg acaggtccat tccctttcta aacaaccgag caaaagtaac aaaataagag
      241 cgagaacaaa tttcaaacgg gcaaagagta aagcatctgt tacacaaagg aagaaaggag
      301 cttaaagact gagctaaatg aatcctttag ccacctccct tcagggaaga gaaatctgac
      361 cccaggaaat aaataaaagt cacccaaaaa gtgaacaaaa gaggtgtttg aaaaaatccg
      421 aacaccattc atcgcagcta acgacttgtt cattatgagt gatgatggat aaagacttct
      481 cacgctgaga tgaaatcaag atttatatgc attgtttcct ctcccaactt gtgggaagat
      541 catcatcatt taattctatc tctgcggcca gtgatgggca tccagagagc tggttatcac
      601 acggcgcagt cagctggcac gagccgaaac gtgcagttgg cacatctggc ccgagccgcc
      661 acagccgagg gtgaacgatg gctcctggcc agcggccaaa tcgctgcaca cgctgccggg
      721 tctcatctac aaccacccct accagcagct cgctcttccc acccccctc
//
LOCUS       KCKM01002636             851 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41385apa ultra-conserved element locus
            uce-3808, sequence.
ACCESSION   KCKM01002636
VERSION     KCKM01002636.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 851)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 851)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..851
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41385apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>851
                     /note="ultra-conserved element locus uce-3808"
BASE COUNT          236 a          151 c          220 g          244 t
ORIGIN      
        1 tgtaagtgac tgcagagcgc agaagcacag cactacgtgg cttttgctgt cggagaggac
       61 cccctcagaa tgaggagcag cctctgctgc tgcatgggca gtgaaagcca gggtgctttc
      121 atggagcagc agccacaaaa gctgctttct gacagacaga gtccttattc cttaattatt
      181 agtcctaatg aaagggtttt gtcatattta aaaaaggaaa aataaaagga tttgatgaag
      241 aaaaaaaaag agaaaagaaa cagccaagaa ggagaaaaga tggggaatag ttgggattat
      301 ctctgtgccg tctctcaggt ccagtgacaa catgactaca atgggtagct ttcaggactg
      361 catatggtct tccttccgag ggagttgatt aagcgactcc ggatgaaatt gaaatcctgt
      421 gatttgacct ttgtctggcc tgggaggact gcaattcgca taacaatttc cttttgttct
      481 ttgttttgag ttattaatcc aacatgagcc tcgaattaat caggggtagt gcgttgttac
      541 atttctaatt cacagctcca ctgcttgtgt cttttttaat taaggccgaa tgatagcagg
      601 ccttagcccc tgattgcaac acttactaac cacacattga gggatgaaga ggctaaatag
      661 gcagaatgag attacttcaa ggtttcactt aattgttttc ttcctttaag taaagagcgc
      721 tgaatgaaca ttgttaatgc caggctggga gtatttcttt tatatatgtg ttatgtgtgt
      781 gtgtatgtgt gcgtgcaggg gtgggggagg ttatgagggg tgcagtgagg actcggagct
      841 ctgatggctc a
//
LOCUS       KCKM01002637            1100 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41400apa ultra-conserved element locus
            uce-7094, sequence.
ACCESSION   KCKM01002637
VERSION     KCKM01002637.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1100)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1100)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1100
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41400apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1100
                     /note="ultra-conserved element locus uce-7094"
BASE COUNT          303 a          232 c          230 g          335 t
ORIGIN      
        1 gagtatcctt cacctaagta gatgtttctc agggataagg acttccaaga acctcaggtt
       61 ggtgtttggg ttgggaagag tccaggaaga ctaaatactg cttttactcc attgtaaaaa
      121 ttacttgagt accatctgcc ttctgaattc gactgacagg ccttcgtctc agcagttaca
      181 ctaggacaaa cgatctgtta ctggtatttt tttggagata cagtcctcct agaataggtt
      241 cagcttttcc agaagaacgc tggcctgtgc tgggcaggtt gacatttctt ccttttagca
      301 ataaattgga tcaggctgta acatggatgg ggcctcttcc ttctagtggc atgtctgctg
      361 tcagtcatca atttgagcct aacttgccgt gtaagcgtca agtcagcttc tgaaaatgta
      421 attgagaaag ccttgacgtg caggcagggc tcagtaaact gtttcaaatg cctttccagc
      481 tccttgaatt ttgaagaagc tgaagtgtgt tgtttttacc aggtatcttg cggtaccgag
      541 tggacttcca gggaatggaa taccaaggag gagacgacga attttttgac cttgatgact
      601 actaggtagt cgacctgggt ccggcaaaac gtgcctcgcc cctccagcat ccaacccaag
      661 gagcaaactc gtggtggaaa acacaacaga tccctgcctt agaatcggaa catttccaga
      721 acttgatcca caagcattgg attaaaaaaa gcaaaaccct acactttgat ttgtcatagt
      781 gtcagtacag cagcaaacta ctaagttcct atatgccact ttggactaat ttaaaaagaa
      841 tcccagtttt tacttttact cgatggtgaa attggttgct cttgtatttt atgaaaatga
      901 tttttttaac cttcatgata cattaactgc tgtaaacctc ttccttcaaa aattaataga
      961 agtaagatcc tactggtttg tttcttttta ctttgattgg agaaatcaat tgctgcattt
     1021 tgcagcaacc tgacccattt acatggcatt ctcagcttag actgcagaag aaatgtgcag
     1081 ccattcgttc tcttcaaaag
//
LOCUS       KCKM01002638            1170 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41416apa ultra-conserved element locus
            uce-7133, sequence.
ACCESSION   KCKM01002638
VERSION     KCKM01002638.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1170)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1170)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1170
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41416apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1170
                     /note="ultra-conserved element locus uce-7133"
BASE COUNT          354 a          200 c          254 g          362 t
ORIGIN      
        1 aagcagtgtt ttgccaggtg tacaatccta agacatacct tttaatccta acatttgtgt
       61 gattcaaatt ctgcaagtta aaaagtattt cattcttttg ttgtatggac agagcaatga
      121 atattattgt agggttagta actctaagtg gctattctga ggagctaact tagtcctttg
      181 gaaggagata atagggtaat aaagcacaaa ggaataatct tagtcatgtc tctctggtat
      241 tctgacaatt gcaccctgtt ctaaagcagt ttcgtgaaag ccaccaaaga aataatgact
      301 gtagtcatca actgcacaga tgaggtaaac gtccgtggct gtgtcagtca ttttaatgag
      361 tcacaggagg agggaaagtg gaggaacaaa ttaaaaacaa cagtattttt ctctcttccc
      421 tgcaacggaa gaaagtgaga atagttgcaa tttcatttgc ttttaaagca cagcacttgg
      481 gtaataaacg tcccttgcaa atgtgctgag caaacacctc cgcattcatc aatatgcggg
      541 agctgtttat tgcctcataa acttggaagc gagtgatatt gtctcttaaa tcaatggctg
      601 catggacatc ccaggcactg caggagaaca gtacatccag acaatgctga tagttaaatt
      661 aatggttcta gtaatgactg aaaggtgctt tgtcactact aaaaaagtta gacatagatt
      721 aaaagtatgc ctaggacaca acgtatatgt gcagtgatag ggatgtgtgt acgcgtgtgt
      781 ctcattatag tttttgttac tttggcataa aaacttacta gtccatgcag ttttgattta
      841 aatgtgggtt cggttgccag tactgagaga gtcaagcttg gtttaagcct ggtttgtgca
      901 caaacgcagt ttctaaatct atggtgaaga tgcctttgct tgtgagactg ttagctttat
      961 caatttcaaa tcagattaaa gagccaataa taatctgaat tcatggcttc tgttctctga
     1021 aaatgtttta taaacacaga attagctgac atggcactgt cagtttctca tttacagtgt
     1081 ttcaagcaga tcctatcttc tttacctgaa aggaagagaa tacacagctg gaagatgttg
     1141 ctcctggtgt gcagctgtta gtgttcaggg
//
LOCUS       KCKM01002639             930 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41432apa ultra-conserved element locus
            uce-317, sequence.
ACCESSION   KCKM01002639
VERSION     KCKM01002639.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 930)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 930)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..930
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41432apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>930
                     /note="ultra-conserved element locus uce-317"
BASE COUNT          231 a          181 c          216 g          302 t
ORIGIN      
        1 ttatgcgtga aaatatggtt ttactggtcg gacagctcct taaccatgtc tgtcacaatg
       61 gctctgctgc agttgtcatt ctctgcagaa gttcagattt ttctaaagag aagagcagac
      121 tgtttctaat ggtactagag tgggtgacag agagactgta gtttaaagcc acatgattaa
      181 aaataagttt cttcaaagct ctgaattctg tttataaaaa tagatggtga acatacggta
      241 caacataaaa atccatgtgg tcctggaaag cactttagcc taaaccagat gtgcgaaaga
      301 gagctcctaa acgtatcttt ttatttttta tttgtgtgta tgtgtgtttg tgtatgtggg
      361 agatattttt ggttcctgca aggcttcttt gcagcaaagc ccctttctag aatttacttt
      421 cctttattag agttgcagct cggctttgtg tgggcctctg ggggttttgg ccagccgttg
      481 gcaatttctc tcagacaccc aattacccct gacgtcaatg ccgtctctcc catctccctt
      541 gggtgcccac attttttcct ttgtaacact aatagctgac tagctaagtg cctgttattt
      601 ccttggcaga agatttgatt gtgttttggg ccggatacta aatccaaaaa ctatgtaaaa
      661 atgtcaatag gtgagtgcac attgatttcg gttagtcaca gtgatatttg agcccctttg
      721 ggggctctgt ctggggaagt attttacaag aaagataata taacagaaaa ttactggagc
      781 tgcacaggtc tctggtggat ttcttagggg cctgctaagt ttctgtagaa tcaacaaatg
      841 ctttattaat ctaaatttgt ggttttgttc ctgcctctct tcagacggct cgggctcgcc
      901 agaggaggct cagcgggagc cggggcggcc
//
LOCUS       KCKM01002640             508 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41448apa ultra-conserved element locus
            uce-3842, sequence.
ACCESSION   KCKM01002640
VERSION     KCKM01002640.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 508)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 508)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41448apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>508
                     /note="ultra-conserved element locus uce-3842"
BASE COUNT          213 a           90 c           63 g          142 t
ORIGIN      
        1 acaaaaaaaa taataaaaat aaaattaaaa aaaatattga gtactctaac tacagttcaa
       61 caattgaatc aatgtcactt gtttgcaacc tgttttgtaa atactttatc cataacgaaa
      121 gatataaaca tgcaaaaacc tgaatccata gtccaaataa tacatacacg tgttctgaag
      181 tttctgcact tctccacaga ctatgccaat aaaacattat gtacacacac cattttttac
      241 agtgaagtgg gaaaaaaata ctagaaataa aaaaagaaaa ggtgtacatg gattaagacc
      301 aaaatgtgtc taacattcta gcataagaaa aaaaaaatca attctgctac aaactggtga
      361 tatgaaaact ccctttattt gcaaccagct gcataagttt tagaatttta gtgaaaaaaa
      421 tcccctaaca tctaaaacta gaagtaatgt acattgttcc acctcatggt cttcactccc
      481 agataataaa attgttccat gaggactt
//
LOCUS       KCKM01002641             727 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41463apa ultra-conserved element locus
            uce-7848, sequence.
ACCESSION   KCKM01002641
VERSION     KCKM01002641.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 727)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 727)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41463apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>727
                     /note="ultra-conserved element locus uce-7848"
BASE COUNT          247 a          115 c          137 g          228 t
ORIGIN      
        1 aagcaaccag atgagaaatg gatttttatt cagtcaaatc cttttagtca atgaaacagc
       61 actttcatgc atactgcact caagtgataa ttaatatagt ctaattccgg acatgatgcc
      121 tgaattgatg tactgtcatc aataccccat gttaaaatca aaccttgaca gggacttaac
      181 accctggaac aggtcatcat atgataatac tcttctttcc tttcagtatt tgtcttcaac
      241 caagcaaagt attacaagat gggggggaaa aaagggaaat aattacaaat gaagagtgac
      301 gcgggctgtg aatagaacat atgttaggct aggcagaggc atcagtgaat tatatcattt
      361 catgatgaag tggcagtggt gctgaacgga cctattttaa accttgatgt attttatctc
      421 tactgtattt ggactgtcat ctttggagaa agactttgtg taattgagag tcagctccaa
      481 tctgcatgac ttgagcatga agtgtaagcc agatgaacag tgttatggaa gaaagggaag
      541 catctaataa ggtataaatg agtaataact tttacacctc agacatttaa atgtgcttta
      601 tgaaatgcga tatgtaatag tattaatttc atggtactat taataatata aacaaggttt
      661 gaaaatattt taaaacttag tttattttaa taaaccctac atatttacag ttcagacctc
      721 ctttgtc
//
LOCUS       KCKM01002642             776 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41479apa ultra-conserved element locus
            uce-7073, sequence.
ACCESSION   KCKM01002642
VERSION     KCKM01002642.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 776)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 776)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..776
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41479apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>776
                     /note="ultra-conserved element locus uce-7073"
BASE COUNT          267 a          138 c          198 g          173 t
ORIGIN      
        1 gatgatgagt tgtcagaact aagaggggag tcttacaggt ttgctgagaa aatgcttctt
       61 tcagaaaagc tagatgtgtc tcactctgat actgaggagt cagttactga ccatgctcta
      121 ccccttagtg cagagttaca ggggtctgat aaacgatgca gagaaaaagt agctactgcc
      181 cccagaaaag agattctctc caaaatctat aaagatgtat ctgaaaatgg tataggtaaa
      241 atgtctaaag atgatcatta tgataaagtg acagtgttac actacactgg agatgttagt
      301 agtccaaaac atgcgatgtg gatgcgcttt actgaggaca gattagacag aggtagagaa
      361 aagttgatat atgaagacag ggtggacagg actgttaaag aggcagaaga aaaactgacc
      421 gaagtatcac agttttttcg ggacaaaaca gagaagctga atgatgagct acagtctccg
      481 gagaaaaagc agcataaaaa aaatggcaaa gaaatacatt ctagccagag ctctgccagc
      541 agcagccctg agaaagttct gctctctgaa ttaccgtcat ccggtgacga gtggagtaag
      601 gtgaagcagt atgcgcatga tgggaaatgc tttcccaagg tggatgaaag aaaagcgtcc
      661 agtttgccca gcagtcctga gaaaaggata tttgtgcaac ctgcagagga ctctaaacaa
      721 actatggaac acaaaggaag cgctcagcag actggagtac ctgaggtttc acagac
//
LOCUS       KCKM01002643            1062 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41495apa ultra-conserved element locus
            uce-6942, sequence.
ACCESSION   KCKM01002643
VERSION     KCKM01002643.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1062)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1062)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1062
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41495apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1062
                     /note="ultra-conserved element locus uce-6942"
BASE COUNT          351 a          176 c          204 g          331 t
ORIGIN      
        1 tatagataag gaaaatatgt tgccccaaaa acacctggaa ataattgaca aatgtatgcg
       61 acttagatca gaacgtaatt gccctgattc gacctgtgta gcttttttta aaaactgacg
      121 tagcttgttt aagtaatagt gttggctacc agatgtaaaa cctcccaggc tagtttcctt
      181 tttccatctg agctcaggca tatcacaaag gctctctaat gtgaggggat accagtaaaa
      241 cagtgatgaa aaccataggt atgagtatct gcaagtggct cacatgaaag catttatcgc
      301 ttttcatgca cgtgtattaa accatagtgg aaaagagtcc ttcattgaaa atgcattaat
      361 tatttgacac tgggtttcct cagacatttt ttttgctatg ggatgcaagt gaaagattac
      421 agctgaaaaa atgatcatcg tacttgaggt aggctcacag aatcttttct tatgttctgt
      481 gtgaagttgt cttgaactga aacctctgct ccttaaggat taagggattg aaaagcaaag
      541 actgaagctg ctgtaattta aacccagtca ttctctagca caaaggtgca aaatggacta
      601 agccaatctg cttctttgct agttcagcta agaaataatt ttaccttctg aaagttttgt
      661 actattaaca ttccaaagat gtcattatct ttaaaggaaa tttattctct tgattttcta
      721 acacgagatc agagccgtga gacatggaat atgtggacac ggtttcaaat tgcagtttac
      781 agcatttctg aaaaattcca cctatgtgat gtataggtaa gtcagaaaga taaaattaac
      841 caatgaatgc tactgagttg ggttttcctg tgtataagaa tatcttctct ccagaaatac
      901 ttgcagagca gtttcttagt gctattttaa aaaatggttt tgtattactg gagagtcata
      961 aaaagtatcg gattaaacaa acttagttcc aaggactgca agagaagaag gagcattatg
     1021 ttatattgca gataattaat acattcacta gacagaaaaa at
//
LOCUS       KCKM01002644             491 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41511apa ultra-conserved element locus
            uce-1272, sequence.
ACCESSION   KCKM01002644
VERSION     KCKM01002644.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 491)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 491)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41511apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>491
                     /note="ultra-conserved element locus uce-1272"
BASE COUNT          154 a           82 c          116 g          139 t
ORIGIN      
        1 atttaaaagt cataatggag tattaccatg caatctcttt ttactggccc ttattaatat
       61 aaaacttcaa tttgcatgta aatgcggtca actttcatat catcaaaata catgaggtct
      121 gggaaagtaa tgaattgaag tttgatgcgg caattactga cgtttataaa gaattttaaa
      181 gaggtcattc tagccttggc tgagaaaatg aggaaatcaa cagggaatat tgtcaatata
      241 gcaacagtgg gagttggagt cagtcccagg tgttagaagg ccagatgatg attaatagag
      301 agggagtacg aagcctttca cccagaagga ctgggctgga cctgaggctc aataacagag
      361 atctcatgaa aaggttcttg ctgggttccc actttagctg cctcaaaatg tgttccagag
      421 ggaaagcaag tgtttatgag agagagcagt gctgaaggtt taattgggct ctacatcctt
      481 tcagctccct t
//
LOCUS       KCKM01002645            1089 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41526apa ultra-conserved element locus
            uce-1914, sequence.
ACCESSION   KCKM01002645
VERSION     KCKM01002645.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1089)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1089)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41526apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1089
                     /note="ultra-conserved element locus uce-1914"
BASE COUNT          311 a          241 c          185 g          352 t
ORIGIN      
        1 ttgtgtgaga tctgacccag gcccaaactg ctaaacatgg aacttgcatg ggttactctt
       61 ctccttcgat agttctcagt ggtaaaaata gcactgcccc tcacagccct gcagactcca
      121 ctgcccactg ggaagctgga actgtcactg ccaaccatgg gtgattcatg agtgtgcagc
      181 tcatttttgg aactaattaa ttatgtcaca gaaaggagat ttatttaccc cccctcttcc
      241 agcccccatc tttgccaatc cttgctaatc ttgctttctg gatagcaggg ggaaaatgag
      301 gaaggtgttt agcagtctca gttgtctctg tgattcaaat cagagaatga agccagacag
      361 caaaacaagt gcagatcagg caaagactgc ctgctccgct tgtgctttct ctgcaagaat
      421 cagtttcaaa cattaggtgg attttttttt tcctgttgca attaactaag aaaaatattt
      481 caaagctgta taattaaagg ccagcatttt attagggttt aaaatagtct ttatgaaatc
      541 tactcctgcc actggtaatt acaatgtaca tcttaatata cctctgctag gcctgagctg
      601 gagataacag tcctgtgtgt attgcatttg gcttgtgcat agaaggtaaa atcctttatc
      661 ttatctcaat ctccacacaa caaccagcct ctcttccaat tcagccctaa tcttcttagt
      721 aaataatact gatatttttc accacaacaa aaatggagct gccagattca gactgataac
      781 acctctcatt tacacaccat tctctgtcaa aatctgcctg atttttctta atctctttaa
      841 ctcatcaaaa aatacttttt tacattcagc catggtaagt tccttgctac caaataatat
      901 tattataaat aaatccattg actacagctg tctctttgga tagatattgg aactcctctc
      961 tttcctggct tttttccttg agtgatgaca aattattgtt gtccaattta attttgctgt
     1021 aaagtttggt attctaacaa aatgacctaa cagagtgttt aactgagagt gtgcccaaaa
     1081 ggcatcttt
//
LOCUS       KCKM01002646            1028 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41542apa ultra-conserved element locus
            uce-4605, sequence.
ACCESSION   KCKM01002646
VERSION     KCKM01002646.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1028)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1028)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1028
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41542apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1028
                     /note="ultra-conserved element locus uce-4605"
BASE COUNT          311 a          183 c          257 g          277 t
ORIGIN      
        1 ggtagaccta gataaagtgc ttaaaaatgt accattcccc cattagacag ccattcattg
       61 catgaaaaga actaagtgta tttgttgagg tgtggctata aaagccatgt ttaaaacgaa
      121 acggagttga gagcctgaat gcacagcact gttattcaga agtagctttc gagcagagag
      181 tttcaacggg gaagtgctgt ttggttggac acaaatcagc aaacatttag ctgaagtgtg
      241 aattattcaa gcgtgcatga agagccgggc tttctgaaga gacgaaacaa aaaatcttct
      301 aacatttgca tcagccttaa aggacaatgc gagcagcagg atttgaaacc gatttgcaga
      361 tgcaccctct ttaggcagag agaatgctca ttaaatgcaa gatgcttctg tggctcctgt
      421 gtttgcacgg aggtagaggt ttgcaaggct gacgtattag ataaagtcag agtggttacc
      481 acgccgatgg tgtagcagct gcataataaa tgatggagag aatcatgtta ggcatgccca
      541 cctaacctaa cttgaatcat gcgaaagggg agctgctgga attcaaatag actttctggt
      601 tcccagcagt cggcagtaat agaatgcttt caggaagatg acagatgcag gggaaagatg
      661 ctgttttgca ctatcttgat ttgttacggc agccaactta ttggcgtgat ggagtgacaa
      721 gaaaagcagc tggcatggaa ggtaggatta tcaaagctat tgcatcatta tgaatgtaat
      781 tagaaactga ccgtgacaaa gcatatgcta gaatgagctg ccgctgatgg cagaggattt
      841 gttgctgagg tctagaaact ctgaaaacaa cattcctcgt gcaaaatgta ttttgcagtt
      901 tcatttatgc ttatgttacc ccttctttcc tgcttgcctc caagcttggg gaatcgcctg
      961 cttgaaagag agtgttgtgt taggatgaga ctgaagaata aagtattttc taagtctgtg
     1021 aaacctca
//
LOCUS       KCKM01002647             783 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41557apa ultra-conserved element locus
            uce-533, sequence.
ACCESSION   KCKM01002647
VERSION     KCKM01002647.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 783)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 783)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..783
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41557apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>783
                     /note="ultra-conserved element locus uce-533"
BASE COUNT          243 a          168 c          157 g          215 t
ORIGIN      
        1 tcaatcattt agaaaaaagt tgtatcgatt ccaaaaactt cagggctcat gtgatgagct
       61 ttaagcctct caccaattgc gtggcaccat gcagaaatct gccaaaacaa cacagtttgg
      121 tgctcattgt atcctaatta atactataat gagtttcctt agatagccaa atccttaatc
      181 agccctatca aaactatgtc tgctcagaga aagactcgtg ttaattctgc ttaattcctg
      241 acagtggtta agcaccatta atactccata atttcattgt atgttattgt aatcatatca
      301 gcatatatct cagcagctac agaaggctca ataggctgtt catgaattat cagtcacgtg
      361 gctctgtttc actaagagac tatcttccat cacagccaga cctcctctgc cctccccaca
      421 gtcagtagcc taagcaggta ttaataaagg tctccttttt aaaattgcac tgctctaaat
      481 ggtctttaag ggacccagca gtaatctcaa gatccctata ttttagcagg aaggcaggac
      541 agaggaatta ataagagccc tttctgtgta aactgctccc tgctctaagg ctatatcctg
      601 atgtcagggc gctaagagaa ttttaaatgc acaggatgga ttgtttgtgt tgcgaaagcg
      661 aaacaggggg caaaggctaa gagacttgag aaaattgaaa gactgccagg gatgctggga
      721 tgcaaatagc aacaaaacag ggataaatgc tcctgctcac atatgcagga gtcctgcaga
      781 agg
//
LOCUS       KCKM01002648             573 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41573apa ultra-conserved element locus
            uce-814, sequence.
ACCESSION   KCKM01002648
VERSION     KCKM01002648.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 573)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 573)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41573apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>573
                     /note="ultra-conserved element locus uce-814"
BASE COUNT          163 a          135 c          122 g          153 t
ORIGIN      
        1 gggggactgg gggcggcagc ccgaggtgct gagccctctc cccctgcttg cccgctgctg
       61 ctgtcagctc gctgcctgca ctttagctgt ctctttccca gtccctaccc tgtcagtttt
      121 ctggcctgcc aatttcaact tgaagcttga ctgggctgat ttgatgcaaa tacctccagg
      181 gaaaaccctg aaactgatga acagttatgt caagtcgatt ttgcaccatc gggaaaaggt
      241 aacctctgcg agaaaaaaaa acaacaaggt taaagagaca agggcttttc acgtgtaata
      301 ccactgctgc acatctcgtt cactgtttac catccctcag aaattgtaac tgtcagaatt
      361 agtcctaatt gcagatgcga aagctgccat tataataaaa acagaggcag tgcaggcatt
      421 aaatgtagca gcctaatttg tgagactact gaaaaggtag agtaaatgaa tatttcatta
      481 ctttaattac cagggactac tcttttcttg ctgtcttatg ataagtgttg ctgtaactag
      541 caacagcaaa catccactaa aacataaagt gca
//
LOCUS       KCKM01002649             985 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41589apa ultra-conserved element locus
            uce-2733, sequence.
ACCESSION   KCKM01002649
VERSION     KCKM01002649.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 985)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 985)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..985
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41589apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>985
                     /note="ultra-conserved element locus uce-2733"
BASE COUNT          304 a          205 c          165 g          311 t
ORIGIN      
        1 acagcgccag tgaaaaaagc ttcccttctt tttcaaaccc tcttttgctg gatgggagtc
       61 tggttttcaa gattactttc aatcctcctg tttcaggaaa aatatctctc attgtcgatc
      121 aattaataaa caactgaagg aagaaaatct atgatgggta ttctgcaata ataataacca
      181 caattaaaag caccttagtt aatctagctc tgaaatagtt aggtttccat ttgggagctg
      241 cttcaataac atttgcccca cttatcttcc atttcaattt aatattcgta gtgctagtgt
      301 tgcctatatc atcaatgtca aaaactaaaa agtcttatct tcaactttca ttccaatgct
      361 tcaaaagagc tttgaatttg catcttactc tagggaagat gtagtttaaa aacatttttg
      421 cccagcttgc tccattaatt tctgaggaaa atgcacctac tgctgtgaat atgacagttc
      481 tcaaccttgg tgtttttaca ggatgtccct ccccagggaa cgaccaacac cattctgact
      541 taccctgctg gaactgcacc tcctgctggg taatcagcta ctgcagcgct aagggagaga
      601 cctcgctatg attaactgaa tgccccttgt gaatgctaag gaaaaggaga acagcaagtt
      661 ttctaggggg gaaaaagcgc tttcagtaat catctatttt caattcaagc agctaattta
      721 cagttgcata gagttgctca attaccagca gcacttagta ttttatacat ctcagtgagc
      781 tttaacttaa aataatattc atcacaccta tcaaatatat ttttctccca attatttctg
      841 tgagtcaaga acaaaattca gtttgtaatg attatctgac tcagagaaag ctgattttct
      901 attactctag gccaaagcca ctgacaaggg cacaaaaagg attatttttc agcagttttc
      961 agctcagcta aatcagcaga taatg
//
LOCUS       KCKM01002650             818 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41604apa ultra-conserved element locus
            uce-5842, sequence.
ACCESSION   KCKM01002650
VERSION     KCKM01002650.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 818)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 818)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..818
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41604apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>818
                     /note="ultra-conserved element locus uce-5842"
BASE COUNT          256 a          147 c          209 g          206 t
ORIGIN      
        1 gctgcaatag caaaggtctt gaatgactaa gattcttgaa agccttggtc agtatcagag
       61 acagtttcca actgggagaa gtacaatatt ttccctctgc tttttatgaa tggctggata
      121 gggctgtgct ggagtcagag tcccctgcga aagccattca taaaaataac aacaaaacaa
      181 aacaaaagga cacaaaaaac tttctgggtc cagtctggag ccactgggtg ccagaggctg
      241 ggaaaacagg ctggcagctc gagccccagc tatcactgaa agtattcaag gggctttttg
      301 gtggtctgaa aagtatgaag tgctgtgtag aagggcagct ggtagaatta ctgtgacaca
      361 tactaggcag aaagccagag ctggccttga ttcagacatt gtctttcctc tcattgaagt
      421 gtcaggacct aattcatgga aaatttggtg agttggcagc tctttcagaa gatttcattg
      481 agctacagtg tgtgagagtc acatgaatgc agagtgcgtg gccaaaaata tacggggatt
      541 tctgaacagg agaaagcagt cagcctctaa gaatgtctgc agatttcatg tggtttggga
      601 ataaacacgt gtacaggtgt aatcagcagg caaaaagaaa ataaagcgga aaagcactag
      661 tggcagatta ctgaagagct caatgagttg tgtaattaca agggattcct ttgaaacaaa
      721 tcattccttt gtctgagggc agcaaatgtc tattaatgag ttcagggctt gcaatccacc
      781 tggagaaggc atcaataaaa tgtgtgcctt agtaatag
//
LOCUS       KCKM01002651             823 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41620apa ultra-conserved element locus
            uce-238, sequence.
ACCESSION   KCKM01002651
VERSION     KCKM01002651.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 823)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 823)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..823
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41620apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>823
                     /note="ultra-conserved element locus uce-238"
BASE COUNT          204 a          159 c          169 g          291 t
ORIGIN      
        1 ctgggctgct ctttttctaa taactgtgga cgttagctgg gtggatgttc agcgcacgct
       61 attgtgaatc ccaggatgat atcgccatta cttagagctg tattttgcat tgcctgttct
      121 gttactgctc agcatgcaca agggtagagt taaaatcttt attcatttca tttaaaaatg
      181 tttcttttgt tctccttatc atgttctggc tttcccaagg atatatgcct tgaacgaaaa
      241 gtcacatgtg cattactaat tgtgtgccat tgtatttaca gttcctagtg gtggcactgt
      301 gaagctacta attcttttgc ttcacttgat gtaaaataat ctgagtgtct ttgatagcag
      361 tgaaacagta ttaattgttt tgtacatttc ttggtcactc ttcttaggtg gtcttcataa
      421 tctattagaa ctttcagcca gatttttgta atgtcatgcc tccagcagtg attaaattgg
      481 taattaatga acagtccttg gcaacataaa ccacatcccg ttaattttcc cttttgagtt
      541 tttagaagtt gtcgtctctg tcagaaagca ttgcgccacc ttgctacagc cccttggcat
      601 gaaaccacaa cggcttgatt ttttgcagcc attagtagat cagagcagta atttcacagt
      661 attttggtca gggtaattat agtaccaagt accaagtagg gttgggaatt cacacaagaa
      721 gtccagaaat accaggtgag cttccttgtg ttcactggga cgttatgatt agtttaattg
      781 ggctttgttt gatttcagcc gcagagactc tttgtgccac ggc
//
LOCUS       KCKM01002652             846 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41636apa ultra-conserved element locus
            uce-3602, sequence.
ACCESSION   KCKM01002652
VERSION     KCKM01002652.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 846)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 846)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..846
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41636apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>846
                     /note="ultra-conserved element locus uce-3602"
BASE COUNT          260 a          147 c          168 g          271 t
ORIGIN      
        1 gttaggagca aggaatgatg ttagtagcct cagtgtgcat ttcataaatc caaggatttt
       61 ttaattcctt tttctttttg gtttggctct ctactgtatc ttaaatgctt tatttttcag
      121 aggagagata agacttggtt cttcacataa aactacagct tagccattac ttagtgtttc
      181 tctgttacgg aaaaggtcct gtctgtgcac agatgtctca gattaaattg tatctcacag
      241 tccttacagt gctcagtact agatgaactg ccaaaagggc cgtaggcaag aactaaattg
      301 ctttggtttc agtacacagt gaatttggct cagacaagct gaatcagtac attaaatgcg
      361 aatccctcac agatttgaaa gcagccttta gcacaattat tgactgtgag tgatgattat
      421 gtctaattga aggagacttt tgctacctgt agctcagttg gagtccatga gagccacagc
      481 aaggcactgc atcttaattc aatgttccag cttgaaagaa gcaattgaac ctaaatcctg
      541 aagtgtatac acatggtcga taaactttaa taaactttac aggttcagta actagactga
      601 gtgtatataa ttcaattttt taattcagga aaggaaaata ggtaacaagt atgttaggct
      661 acaataatgt attagttcat ctcatgcaga ggccctctca gtaaaaggaa aagatatagt
      721 ttcatgcttg tctttggaac aagtcataaa tctgctgttc tgtacactgt attaatactc
      781 tacaggagca ttactagaga ttactgggtt acttgggtat gatccaactt ccagtaaaaa
      841 tgtgag
//
LOCUS       KCKM01002653             734 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41651apa ultra-conserved element locus
            uce-1678, sequence.
ACCESSION   KCKM01002653
VERSION     KCKM01002653.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 734)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 734)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..734
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41651apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>734
                     /note="ultra-conserved element locus uce-1678"
BASE COUNT          241 a          146 c          117 g          230 t
ORIGIN      
        1 tgactttcaa tcaggcattt ttaaattgtt tttaatttat ctaaaaacag gctaaagagt
       61 ttaattaaca ggctcagagt aatagttata ccatttttcc tctgctatca gctttcactt
      121 ttatttacga tgggagtccc ccttgtatct cctttcccac agggctcact atcactaata
      181 tttctgtgat ctgtgaataa accaaaattt aaagttagta cttacaatca atgcaaatta
      241 atgatttctt aaatatttca atcaggaaaa gcagctttgt agttgaaaat cccatgctgg
      301 ccttagagtg ggagtttttc cagcctctgc ttaaatccaa aaaaatactg caatcttctg
      361 gcacaggctc actgtaatgc tttaaaaaca atttagcaac tgtcattgct gtaattacag
      421 taactaatta ccatccttag caaacaaata gcttaacata atacgcaagc cgaatcaatt
      481 ttgaagaaat gcaaattccg aaagcgaaaa agggcatttt ggcaaacctg aaagagaagc
      541 gggaaaataa tacactttgt tttatctgca cataattccc agggaatatc atatcataaa
      601 tatttgcatt cagttcttat caggacattt gcatttgctt cttatcagtc tgcaggccgg
      661 actctgccag atagagagta gagctccaca ccatgcacat atttctaatg aatcacgtct
      721 caggccgaga gaat
//
LOCUS       KCKM01002654             910 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41666apa ultra-conserved element locus
            uce-4472, sequence.
ACCESSION   KCKM01002654
VERSION     KCKM01002654.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 910)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 910)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..910
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41666apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>910
                     /note="ultra-conserved element locus uce-4472"
BASE COUNT          287 a          182 c          147 g          294 t
ORIGIN      
        1 ggttcagtaa taagttcatt caaaaaatca caaggcagtg tgacagctgg agtgaggaaa
       61 gacttgtggc aatatttttt taagaattgc atgatgaaaa aataattata aacattaaca
      121 attgtttttg gcttttttta aattttccca tgacataaac aatagtactc tggtcataag
      181 ccaaaacctg acaaaggtcc aaggttgaaa agggcttctt tgagcttgtc ttcctggtgt
      241 aattattgta ggttcagagg aaccagatct ggagtgttgt aaaactcaac acaatgaact
      301 tgacagacag ccagatttct gttttcagcc agtttagggt tactataatc tcattattat
      361 gcttgaaaga cgacaagtaa tagaatctca ggtagccgtt ctgtctttac tcagccgcat
      421 cttctctttt atgccgattt cccttgatta cctgaactag tgaggctcat ttttcaacca
      481 cttatcttcc agaaataatc atctgatcag ccttacaagg ttctcactgc actcaacggt
      541 tttaatgggt caagcgttaa attaaccctt taaccatacc ccaggagaat ataaaactta
      601 ttaaaaaaca atttactatt cagtcattgt taactttaca gaggaggagc tccttagcta
      661 gctttgcttg ttgttccctc cactcgtgtc ctgttttact acatctttgc ccttactaca
      721 cacaaaatct ttctaaagct tccacctaag gaagcattct tctgctttct tacttctaca
      781 aaagcataaa acgaagccac aagaaaagca actgtgtatc ttaacgtatt ttaaggtgac
      841 tttttacaaa agttagacaa tttttccaca tatggaaaac atacatctgc aaaaatgtga
      901 ctcatatcat
//
LOCUS       KCKM01002655            1101 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41679apa ultra-conserved element locus
            uce-2453, sequence.
ACCESSION   KCKM01002655
VERSION     KCKM01002655.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1101)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1101)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1101
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41679apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1101
                     /note="ultra-conserved element locus uce-2453"
BASE COUNT          310 a          239 c          267 g          285 t
ORIGIN      
        1 ggtaacctgg ttttgacttc ccagtcttcc taaaaaaatt aaatcaaaaa aaagggaaaa
       61 ggagagaaag aaagaatgga gagaggaaga aaagataaac taatactgaa tgcatctgag
      121 gcacagaggt ctacgtgaac ggtgtcttct gctgatgacc taatcaacgt ggcagaaaat
      181 gtgtttggag atggcaagat tacagtggct ttcccagtgc gtttcagact tttaaaacca
      241 tatgtattta ttacattaat gttcgtcctt aatgcatact cgacctctgc tggtgcttaa
      301 ccaaattact aattaggcat gattcacggc agcatagagt agtataaagt ccccaatgca
      361 aagagccatg cagccgggtt actacagatg actagcctgt gccattccca ttattcagcc
      421 tttcctcctt ctcaaaaaat cagttggagc taaaacagtc gaaagaagaa acgggtaaga
      481 ctttggcacg ctgcatggta tcagtccgag ctgatgcaaa gagtgattgt gaagtgtttt
      541 cttatgcttc ccgcagtgga ttcactattg agttggcttc ggcgttcaca gttgtggtag
      601 cttccaatgt tggacttcca gtcagtacta cacactgcaa ggtatgcctt tgcccaacga
      661 ctgcagtcaa ggcagtctgg actattcgtc ttaaaattgt gccgctcgag ccagcggata
      721 atggcacggc gaggggaaag cagccgcgtg cagagaacag ttacgggcag aggcgtgcca
      781 gcacgtctca gccgtaccag ggatgctgca aaataatcaa gcttcccatt gggggttgtc
      841 acagcaaagt cgctggagtc aggcacagca cgaactccat agctgtggtt aaagaaaaac
      901 agcgcttaca aaagtgtgac ctcaatttta aagcgaacga ttacgaggaa gaccctggtt
      961 tcctctgacg gtgccatttg aacctggtcg ggtagggttt ctcccttgtt cagaggctgc
     1021 gcaccattcg tcatttatac ttcactttct tgatgcgtgc atggcatggg atttcctgca
     1081 tataactctt ttactacagg t
//
LOCUS       KCKM01002656             805 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41695apa ultra-conserved element locus
            uce-125, sequence.
ACCESSION   KCKM01002656
VERSION     KCKM01002656.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 805)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 805)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..805
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41695apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>805
                     /note="ultra-conserved element locus uce-125"
BASE COUNT          270 a          165 c          149 g          221 t
ORIGIN      
        1 agagagtacc ttaacctgcc tttagaagtc agcaaaagaa agtaaaacta gtgttgttat
       61 aagaaaccaa actgacttca gtttcttccc aatgacgaat atgtgttttt gccattctct
      121 tcagtaagga tggaggcaga ctcctggtct agcccacagt ttcatccttt aaatcagagg
      181 cagtagtgta actagtctca agtaatgatg cttaaatatt gtcaaagctt gctttccttt
      241 atagttctaa gcaatatata gagaaaaaag gtattggaaa gtatattaac atgaagaaaa
      301 gtaggagatg ggaaaatgta aacaataagc cccataaaac tcacgaacaa accagtacat
      361 tttgaattgc tctttggtaa ctgatgaaaa aagtgttatg aggcaaatcc ttcactgggt
      421 cactcactgg ggagactggt aaaaataaat tgcacagctc taattttcct agcagcttcc
      481 atgctattct ttgaaactga gtaagaaacc cttggcctaa tcccaagagc caatctatag
      541 taaatagtgc acacttaatg cctaagttcc tttttagcac cattcagaca gtgacttcag
      601 ccacacagct tagtcatagc agacattttt gtggtgaaag cattaaaccc acatgcagct
      661 ctctttctgt ggccactggg ggtcatgctc ctttcccatt agctgaataa atcataaagt
      721 ctgcacagac cacacaagaa gcaaggctag caagccacag gcagtgccta cagcctgcta
      781 tttcttttca gaattaaaaa aaaaa
//
LOCUS       KCKM01002657            1078 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41709apa ultra-conserved element locus
            uce-3659, sequence.
ACCESSION   KCKM01002657
VERSION     KCKM01002657.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1078)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1078)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1078
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41709apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1078
                     /note="ultra-conserved element locus uce-3659"
BASE COUNT          322 a          201 c          207 g          348 t
ORIGIN      
        1 ccaatatgca tgcaggaaaa ggagcgggct ggggggagac ttttgtagtc agggtgtaat
       61 ccttttttca tgtactgtgt tcacctagcc caggagtcag atttttgttt tcttttgaag
      121 agttctgcgc cattttccat cagaactctg tcctgatgta agaactagta gctgtgactt
      181 ttaagtaatc cccctcacta aaggcaccat tatggcaacc agcaatgtcc taccttaaat
      241 cattctgaca atgtactctc tgtgctgccc aggcttggag gatgtcctca aaacattcaa
      301 agctgggatg atattcatgg ttaagaaaag tccagaagca gacaaacagg tgtgtacttc
      361 tgttagaaaa ggccttttta gttgaagacc ttttgtacac taattctatc ccaggcccct
      421 tttaggggcc acacctgaga gagaaagtga attatcaatg acattttttt taaagaatca
      481 gtggtttaac actaatttct aatcagatcc tacagaaagg aacagctcgc atggcagctg
      541 tacttttccc agggttaatt acctttcact gctctctact aatgagtcag ctgttcctgt
      601 catcacacaa ctacactgtg ttcatctgta gctctagctg tggacaaaca cagtagctag
      661 agccctgttt acattttggt gaggtttgtt gtgcaaagaa tttgtgaagc agtttaaaaa
      721 gaaaatacat aaaactcctt ccactcccat gtctattttc atggaaacaa ctgtattttt
      781 catgccaaca ccatgttctc aaggttactg gattattcaa cagcggtaga aatctaagga
      841 catgaaaact aataaaattt tttgtaatat tgcataatag tttatgtaaa gattagatta
      901 gcttgtctta cctgattgtt gggtcagtat gtttatttat atcttgctgg tgtatgaact
      961 ggaaaacttc tttgtaaaat attgtttaaa acagtagaac agatcatagt gcaaaaatta
     1021 atgcacttga aagagtttgt attattttta tggccaacac taataagaca atgattta
//
LOCUS       KCKM01002658             706 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41725apa ultra-conserved element locus
            uce-5433, sequence.
ACCESSION   KCKM01002658
VERSION     KCKM01002658.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 706)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 706)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..706
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41725apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>706
                     /note="ultra-conserved element locus uce-5433"
BASE COUNT          214 a          133 c          143 g          216 t
ORIGIN      
        1 taggttttaa cgcaaataca tcagtggacc tcgggttccg cacagtgtgc agccacgctc
       61 tgccatcaaa ttaatgttaa aatatgtatg tcctggcttc tgatttataa tattgttgac
      121 aaatagtaaa aaggacaggc atgccataaa gtttatggat gaagtgatgg catgcacaat
      181 gatgtctcat aaagaataaa gggggaaaag ttatttattc ttgtggattc aagaactaaa
      241 atacagatag actggctgcg tgcacagaat ttttcataaa tatcccacag tgcaccctgt
      301 tgtacagcag ccatacatta attagagcat tcagcagaca ctgcaatgtg ttacactcac
      361 ccaagtgaat cttcattttt cacatgcagg gccttactaa ttaaaatcag ctttgcaatt
      421 aaatgtggaa aattgtgtta aactttcaag cgtggtttag aatgtatgta tttttagggt
      481 attttatttt gatgcaaatg aaccctccat caaagtgaga ccagtaaaag ggaggtatga
      541 ggatttctct tttttgtatt atagatgctc ctctcagttg caagttgcaa tgctccacta
      601 tctctctgcc agtacctggc cctgttccaa tgcttttagt gagtgctatc tgtcaaggca
      661 tgaataatac agcccctagg ctgtcggcag aatccaaatg aggcat
//
LOCUS       KCKM01002659             918 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41740apa ultra-conserved element locus
            uce-3797, sequence.
ACCESSION   KCKM01002659
VERSION     KCKM01002659.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 918)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 918)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..918
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41740apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>918
                     /note="ultra-conserved element locus uce-3797"
BASE COUNT          323 a          167 c          177 g          251 t
ORIGIN      
        1 aagatcatca tgatactctt ttttttttct cacacactct cattaatttt ggccttaaag
       61 agtagatact tccttataag gcaaactatt caaaaataat gagaaatcca ataaaacaaa
      121 aagcggtaaa ttccatgtac gtacttgaca tcatcgaagg tgctcatctg cagcttcagg
      181 agatctgcca cttcttttat taactccaag cccttttcca cactcagggg gctgttgaaa
      241 gggagcaaga aaacagagca ttatgaaaat ggaactcatc gatacttgag aggctaaaag
      301 tcccaaaaga gttatcacct tggcctctta gagtctgaaa gccaccacta actgtattcc
      361 tgtcacatag tgatcatgat atcaagggaa ttgggatcag gtgcttcttc aggcatgatg
      421 aatcacctga attttccagc aataagacaa acaataaggt gtaaatggaa ttgttaggaa
      481 gtgtaatggg cccatgatgc agcaaccagt tcatctcagt cctcaataaa aaatgtaata
      541 aagtaaaagg acagaaagag agaaaaggat tgacgagata aggagggaaa caaacaatga
      601 aagtcaaatt gcaggctcag tatcaaatgg acaagggaaa agcatatttt taaattcatt
      661 agtttttaaa atgaatcttc gtctagtgaa aggatacaga attattatgg atttgaaagt
      721 aaacaatgga gcaaggcgca cagtccagag gacactgatt agatacacag gatttagttt
      781 ggtgtgtgca agcactgctg acagagcccg ctttaaatct ttttaacctt tgtcaatgcc
      841 acatttccat tttttaattt agaaaacagg ttgcaatgaa gcctaacagt gctatcattt
      901 ttaaaagcac ttacctcc
//
LOCUS       KCKM01002660             779 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41756apa ultra-conserved element locus
            uce-3857, sequence.
ACCESSION   KCKM01002660
VERSION     KCKM01002660.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 779)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 779)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..779
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41756apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>779
                     /note="ultra-conserved element locus uce-3857"
BASE COUNT          267 a          143 c          132 g          237 t
ORIGIN      
        1 gcaagtgcct acagtgctgc ttgcagccac taaaatacaa gaaggatagg aaaagcaggt
       61 attgaattac agttatcttt gatttaaaaa atgtttatct ttgaaaatac atatctgtta
      121 ctgacaagct ctgaaaacca ccgctccatg cctgtcagta aaaccaaatg ttaaatggaa
      181 aatatttgcc aggatttaaa attagaccta cacattactt acagatgttt cagtcaaaaa
      241 cacttgaaac tcaaccacat tcagtaataa accccacaat ggtgtatttt ttttatactt
      301 caagttaatt tttattatat aagtagccct acgaagaagc cattgcatac tgcttaaatt
      361 aaatgtggag gaatgaaatc agcagtatcc ctttacagca tatggtccag caaatcaaat
      421 tataaagctt tccacatctc attaactgca atgagtacag tgagatttct aataagtcac
      481 ttctttttca tgtgagaggt gagcagtgac ttattgtaag tattctcaca ggatggccct
      541 tgcgctgaaa ttaagaacta atctaaaatg ggaaaggtca tctggtcaag tctgatcata
      601 acatttcctc gttattgttt tagttggcat agaagcacat gctttcccgg tgcaccagct
      661 gaaaaatgcc tttgataatt tcactgacag caagtaaccc acacactgcc atttaatgag
      721 tttgggctgg attagctgac aataaaaaat acagtataaa tgcttttata gaatgaatt
//
LOCUS       KCKM01002661             954 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41772apa ultra-conserved element locus
            uce-3752, sequence.
ACCESSION   KCKM01002661
VERSION     KCKM01002661.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 954)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 954)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..954
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41772apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>954
                     /note="ultra-conserved element locus uce-3752"
BASE COUNT          316 a          194 c          164 g          280 t
ORIGIN      
        1 tcttcgtttt agagaaggtg ctattaaaaa aaagtagcta tgcataacag caggcaatca
       61 tatcgaattg aaaaggcata taatctcact gaattttgtc ctgaatgaaa agtatacatt
      121 cctaagaaaa agcatagcta ctctacagtt accatccagg tacctggtga cttttcgact
      181 atcacatgct gagaaagttt tctctctgaa tacaccagat acatgtaacg agtatgcttg
      241 ctttaaggtc agacaagaaa ggctatgagc tgcacagtct gctctgcttt gttttgctca
      301 agtgaaacat gattttaaaa gtaaatgctg aactagcacc aaatatttaa aatatgttat
      361 agttggtgag tttttccaca gtgccggctt ggtttccgtt cccgccatga catctcacaa
      421 ctctaagtgc tcaatgacag cctgtagagg tttcgccata atccaccttt atccattaac
      481 agacactcaa tcactaaagt gcttactaga ctaaacatat ttatccaacc aaatcacact
      541 ttacaatgca aaactgccaa tcagacccca gctattaaca aggaactgct ttaaggggat
      601 tttggtgttt gtgctgtgaa gagcatgctt acctccaaca aaccactaaa ccaaattaac
      661 atagctgtat cctcataaaa gaaaccagat atcctgttgt gaaaatagaa agcttggtag
      721 gacaggactc ctttgatgac taacagtgtg gcagacgaag gcttcagact acaaatctgg
      781 ttaccacagg ctcattacaa aactctagca ttaagctttt gctaacttta aaagcaaaat
      841 aaaaatgtat catttgggta actcagtaag tcatcaactt actaagttac tattataatt
      901 gcaataagtg ctgtaattgt tggataaggc tccttaattc taattgctcc tttg
//
LOCUS       KCKM01002662             350 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41788apa ultra-conserved element locus
            uce-3475, sequence.
ACCESSION   KCKM01002662
VERSION     KCKM01002662.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 350)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 350)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41788apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>350
                     /note="ultra-conserved element locus uce-3475"
BASE COUNT           82 a           98 c           91 g           79 t
ORIGIN      
        1 cagtgtaatt aaggagtaac ccatcaacaa cacgccgatg gtaatgccac cccatctgcc
       61 agcgcctgca ctcgctggcg ccgcgcctcc tgcctgctgc cacttctgtt acccacctga
      121 tccttggaga cctgctccga cggagcgttt ctgccaagct cttccagagg atagacaatc
      181 tgtcgtctcg gtcgcacggg aaccatgtaa tgaagggcag atgtcaggga atgggcccgg
      241 ggattctgaa agtgagagac agcaatctat atttcagcgg cgagaatgtc aggacagcgt
      301 gtcgcagatg tcccttgtat ggctttgcaa atacaaaatt cttagctctg
//
LOCUS       KCKM01002663            1144 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41802apa ultra-conserved element locus
            uce-7227, sequence.
ACCESSION   KCKM01002663
VERSION     KCKM01002663.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1144)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1144)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1144
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41802apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1144
                     /note="ultra-conserved element locus uce-7227"
BASE COUNT          262 a          289 c          262 g          331 t
ORIGIN      
        1 ggcatcagcc ctttcacaca actcctgtcc ttgagcatga tcctgcttta catgggagaa
       61 gtgcagttgc taagctgggc tgggtcaaga gcccatctag cccatagcag ttcgacaaca
      121 gtctacggga aaagctgtca ataagttaac attaaccaac tgttacaagt attttctctt
      181 catctgacaa ccatctggga aaggttcccc agagtccagc ccctgggtta tccacttcct
      241 tccaggcggg gtctgttctt ttaaacagag caatgagcac aactcagaac tggaaaactg
      301 agcgaagact ggatttcaaa ggacaggcaa cagcctctgg aagcgtcaag aaattactct
      361 cagaggaagt gaaacagcag gaacgcaggc ctagaacatg ccattcgtac tcaatggaaa
      421 gatttgctta cctgttcgtt aggctcaaag cttatctctt ctttttccgt cctcatagct
      481 attaactttg tgctaccgga agggtctgtc ttactgtcca accgctccag ttttgggggt
      541 atgtctggta aaccaatatc tttagtatca tctttatcta gcaagtagcg aagtagtgca
      601 ttattattct tcttaggact cactggctcc tgtttaacag tcacctccga accaggagct
      661 gtgctactgg actcctggtt cagctctttg cctgtggcct ctgctgtgag cttggccaga
      721 tctacaggag aactactgtc ctgcaatagt ctgtgcaaaa ttttatgctt ctccttgagc
      781 gaagttccgt gtgtcgaacc agacccaggc aaccctcccg tggagtcctt gctaacgtct
      841 gccatggtac tggacaaagg tgaaggctcc atctgatccg atttggtggt cagcaattgt
      901 aagagctttg tctggctttt tccgtcgtgc agtttattct gtccatcagg tctctcgcca
      961 ctgacgactg gcggcacgtt gctatcgcta ctgtccttct gttctcctga atggcagctg
     1021 ctctctgctt gtccagttgt accttctggt tgctccccgt atagtccaaa gcagtcttta
     1081 gagtccaggc ttcccatctt gcttagctgg gggggattca tattcacagg ggaattttgt
     1141 aaat
//
LOCUS       KCKM01002664             353 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41818apa ultra-conserved element locus
            uce-2355, sequence.
ACCESSION   KCKM01002664
VERSION     KCKM01002664.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 353)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 353)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..353
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41818apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>353
                     /note="ultra-conserved element locus uce-2355"
BASE COUNT          118 a           52 c           62 g          121 t
ORIGIN      
        1 gaagaaatgc aaagtgtata ccattatagc actaaatgaa gatcttattg agcttcaaga
       61 tgctttgaaa cgtgtaatta ctaacttaac tccgtctgtg aacttgtcct cattaactct
      121 gtaattagca agatcttgtt tgatcttaga gttcattaga cattgcacat ggaagattgt
      181 ttcggtttta acacatgaga atagacaatt aaagtggtaa taaagaatca atataacttc
      241 cctgtttctt agatttttcc aaggttgcgg tgttcctaat taaacacgga ttgaaacagt
      301 gagaaattaa aaagtagtgt agtcatactt attttggttt aacagcctat tta
//
LOCUS       KCKM01002665             863 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41833apa ultra-conserved element locus
            uce-6633, sequence.
ACCESSION   KCKM01002665
VERSION     KCKM01002665.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 863)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 863)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..863
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41833apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>863
                     /note="ultra-conserved element locus uce-6633"
BASE COUNT          226 a          206 c          192 g          239 t
ORIGIN      
        1 agcagagtgg aaccgcgggg aagcggggct ggcccggtgg ggcgctcccc ccgacccggg
       61 cacaccggcc caggcactgg cagttgtccc ctcaaacccg ctccctgcag ttttatcctg
      121 cgttattgca gatccagcct cctccaccaa acaacagatg cagcctctaa tgcaaatatt
      181 gccatttccc tgctgaatta gccttgtcac ttagcccaga agctggcagc gttaagccag
      241 cttgcatttt aatttggccc tgaagttact tatttcatta ttgatcaaac ataatgctga
      301 atcaatgttc atcttgttac ctgggccatt tccatgtaat acagtgatag cactgcctgg
      361 agttactcat tcccatccca aagtgacttt accataaaat caatgcttgt ttgttactga
      421 tataaggcag catccgtggg gtgaagagca aataaagcag ttacgccatc gcgatctaaa
      481 agtttggacg gaatatgtac gtgaacaaag actttgatat ttaaatgtat tttatcggca
      541 tcaaaatcat cctacctagg ccgatgggac agaaaatctc aggctgcaag atgacgggct
      601 ttgatactgt aggtgttgcc atttgtaaac gctacctgag acctaatggg ggaatcgttt
      661 ctaaaccagg gtatcattac acagcagatg tgggctgtaa gctcttccgg gcggggactg
      721 ttttggaaaa atagtaatta atacaatagt aattaatgat tgtgtcacaa gattagactc
      781 cgcgcagtgt tatcttcagt gcagctgctg cttcttttct ttgcttgtgt tctcccctcc
      841 agctaataaa cccggttaca aat
//
LOCUS       KCKM01002666             821 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41848apa ultra-conserved element locus
            uce-6296, sequence.
ACCESSION   KCKM01002666
VERSION     KCKM01002666.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 821)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 821)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..821
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41848apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>821
                     /note="ultra-conserved element locus uce-6296"
BASE COUNT          227 a          181 c          174 g          239 t
ORIGIN      
        1 ccgggtgccc tgcacttctg caccgggacg ggctgcaagg tcacttccct cataaacttc
       61 gttatcgctg ttggttttat tcattatatt tgacatatta agcttctgta tcttggcata
      121 aaggacacaa tattgcagca tattggcaag ctcatttgct tttcacagct agtgttgtgt
      181 ccaaatatcg gtccccgggg agcggcacgt gtatatagac tgcaggaaaa tgagcctcag
      241 cagcaggtgg ccttttgcag cctaatgaac atggcaatct gttaccagca cggcgaggct
      301 tttcaccaga caattaggca actaagcatg taattattca ggccaacaag aagaggctct
      361 tctctaattt catcttttca ttgctgttta ctcacccaca ctcccctcat taatgagaga
      421 ttttccagcc tatgctaatt ggtttcaata acattcattt cggttgaaag ggaacgattc
      481 tgttaattga gaagcaaaaa gcatcttttc attttgagtg cgtcctgcta tggaaatctg
      541 aacactctca acaggttcga gctaatgaaa ttaagttaca cagccactgg tggtgtaata
      601 gaaataaagt aatttatttt cactgaagca tgtgctatag gtcctggaca attaatccag
      661 ctcgttcggg agagccatcg gagaagacga ttttgaataa acggggctgt ctgcttcaga
      721 tctgccgctg caattctcag ggtagtttaa ctgctaagct ctccagcacg acccgaaaat
      781 atttaatgag aacgagatgc acttacggaa acactaattc t
//
LOCUS       KCKM01002667             879 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41864apa ultra-conserved element locus
            uce-1299, sequence.
ACCESSION   KCKM01002667
VERSION     KCKM01002667.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 879)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 879)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..879
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41864apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>879
                     /note="ultra-conserved element locus uce-1299"
BASE COUNT          283 a          131 c          182 g          283 t
ORIGIN      
        1 cgtactaatg gtgtttttta ttctttccag cgtaaaggtg ctgtatatgg tgaaataaga
       61 tgaataaagc tctgcatgca gacagatacg acccagtgca gtgaggaatt agaaggcagt
      121 aacagaaagg aaatgaagag tttattgttt ttatagctct aatatccatt aaaagttagt
      181 aacacagcag gtgacagttt gggtaagtgt aaagtgaatg ttttgaaata aatagcagtt
      241 gggtgacctg ggatgtcagg gctctagaca agggtgtgtg tttgtcaata tatcctacat
      301 gttttacaga ctcctcaggg aacaggggaa gatacaattt caccttttct gtgccaaaac
      361 attttaatta tatcttcttc caagtacagc ggttcagtaa ccaaggagct gacattgatg
      421 catgtgttga taaagctgca aacattcaaa atgagattaa caaagatttt gaggaaaggg
      481 tgacagctaa ttttgcacag tattctgcat ctaattcagg tcagtgtaat gatagaatat
      541 tttataactg ttgtgtcatc cagagggact tttatgatgc tttgtgtttc tgaggatttg
      601 tgtatatgaa agtgtagttc ttaatacatc attcaaaccg gttataactt tattgaacat
      661 ctattggttg tagccataaa caggaataaa cttcagcatt tagaagcaat tttatatacc
      721 catcagcatt catcacccta ataggttcct tttgtctaat tcaccttgaa agtattgact
      781 tcagatgtaa aatggaacca aaagcaccgt gtccctttca tggcgttgct taatatttga
      841 aaaaaagatc gaatggaaag ttatattaag tgtatttaa
//
LOCUS       KCKM01002668             371 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41878apa ultra-conserved element locus
            uce-2108, sequence.
ACCESSION   KCKM01002668
VERSION     KCKM01002668.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 371)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 371)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41878apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>371
                     /note="ultra-conserved element locus uce-2108"
BASE COUNT          106 a           71 c           79 g          115 t
ORIGIN      
        1 tccttcatac ataatgatct ctacttcatt aaaagcgtat taatctggtt cccggtctct
       61 tgggagacac cttaagatga tgatattgtg ggggtttttt ccccccgaat tgtttaaaaa
      121 aaaaaaaatt ctagcagatt tggtccctgt cagtcagaaa taattgtgtt cttaatcttg
      181 tccctgatgg atgactcgga gttcagcaac gggccagctc caatgacaaa tacaatatta
      241 atattcatta actgctttga caatgctaat tttgatgcag tagtaaaggg ccttccaaag
      301 ttagcggcca aagcatcaga gctgcgcaag gtggcaagat aatttgtgct ggtttgctga
      361 gctgaaggct t
//
LOCUS       KCKM01002669             646 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41894apa ultra-conserved element locus
            uce-4687, sequence.
ACCESSION   KCKM01002669
VERSION     KCKM01002669.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 646)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 646)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..646
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41894apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>646
                     /note="ultra-conserved element locus uce-4687"
BASE COUNT          121 a          164 c          137 g          224 t
ORIGIN      
        1 ttaatttcca tgtttcctga aactaatcag gctttcgtat ctcaaaccct ttactttggt
       61 gaaattgcct gcttttgtca cagggaaaac tcaaaaatct gtgtctggtt ccaatactga
      121 cttctctttc tctctctcac ttttctgtat gtttactttc cctacccctg tcttcctttc
      181 ctccctcgtt ttctttttct tcctcctttt ggcttgccgg ttcgtcagcc cgtccttcct
      241 tgctctcttc cctccttgca gaacaagatg gtgaaaggca gcctcagcac agagcagtcg
      301 gagcgggggt gaggggggaa gtgtgctcct gggaatggaa ataaaagcaa gcacaggtga
      361 gttggggaga gtttgcgctt ttcacctgcc tccttctggg gcttcttaac ctccagcacc
      421 tccctcgttt ctgcgagaaa tcgaggtgct cttgtgtacg ttcagagtat ttgtaatgac
      481 cgtttctggt tttttccgtg ctactgtgct gttcaggcaa gtgacttcac ttttttgtat
      541 ttctgcagct gtttagtggt aaaaggcaaa gcttgttagc ttttacaact gcctgattac
      601 tctctcagct aaaccagtgg cacagatctc ctttcatgtt gccatg
//
LOCUS       KCKM01002670            1010 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41910apa ultra-conserved element locus
            uce-3013, sequence.
ACCESSION   KCKM01002670
VERSION     KCKM01002670.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1010)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1010)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1010
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41910apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1010
                     /note="ultra-conserved element locus uce-3013"
BASE COUNT          271 a          236 c          202 g          301 t
ORIGIN      
        1 gaataatatg tcagtgggtt tgttatttta agagctgcta aacagaaatg gctgtgaaga
       61 ggtagccctg aatcatgacc atgcactgtc tctctctgga atctcacctg caaaccccca
      121 aactatttct gttgtcaaaa ctgagcattg catcattttc ttggaggaca taataaatat
      181 ttccaccttt tactggagca aatacaaaat atataaaata atctttctac ctcattagga
      241 tttttataaa atagtcattt ggatttcaaa gggtgaaatg aaatgagtaa cctgcaatat
      301 cacagtatca ctgcagctaa gttcttagta aacacaatat actgcggtga tattgtgctc
      361 tgtttcttca gattaaatat atctcatcct cagatttata ctggcacttt atggcttctg
      421 caaatgactg tctcagcacc gcaaagtaat tccaccctgt catatttgtc tttggaaatt
      481 gtaacaaatt atggtgattt ataacatcaa actcaactct tccatttttt ccccagatgg
      541 gaacgtcgct gatggcaaga tgctgggcca tccatttatg ctgtgtggag ggtgacagtg
      601 aaacatgttt catctctctt gcctgacact ctctttccct ttgaggggag gctgtcagca
      661 taactcaagc tgtcaaggca cctttgcaag gggcctgaaa caaatctaaa gctctcctac
      721 ctgcatgcct actaatgagg tgtgacttgc ctttcctgcc tgcctggcct cgatgagtct
      781 ccttgcctct gacccctcgc tgtctcttct cagtcaatgg aagtcaaacc ctcatttgtc
      841 tttgactaag gacaggcaac gatcagagac ggaaactttg gggaaactca ctctgcaggg
      901 acttctgctc cgctgcacgt cgcccaggaa gaaaacatct cgtgccagca tcggggttgc
      961 tgcgtgaaag cccacgcgag ggttaaactg gccttgagat attctcctca
//
LOCUS       KCKM01002671             632 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41926apa ultra-conserved element locus
            uce-1026, sequence.
ACCESSION   KCKM01002671
VERSION     KCKM01002671.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 632)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 632)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..632
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41926apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>632
                     /note="ultra-conserved element locus uce-1026"
BASE COUNT          160 a          126 c          152 g          194 t
ORIGIN      
        1 gggcggagga gccgcggcaa gcgtgagggg cccctctgca gggtcttcct taaggcctta
       61 ccttactttt cgacagttgt cattatcttt gtctaaaggt catggctaaa ttgaataaaa
      121 ggaaagctgt gtgttcctgt cgatgcacaa tggcagtatt gactttccta atccagtttg
      181 ctgaggggtg agagaattaa attagatatc taagcgcaga aattgagagc ctttgaaaac
      241 aaagataagg agacagcctg tattttcctt tttcctggga gctctgggct caagattttg
      301 caggtgtgtc atctgatcca tggcttgcat cgatcaaaac tgtgccaatg catatttaat
      361 tagcaagggg accctggatg cattatggcc atcatcccta tattgaatgg actgtcagac
      421 tttctgaatg cttccccacc cccccgcttc gttgtttggg gagcttctgc attttgtctg
      481 agcagctaaa agtttctttg tttttagctg gtgatgcata cagcaccact gaggagaata
      541 caaacaagta aagtcctaaa gtgtttattt tgtctaggaa aaagggctga accaatttga
      601 atcctttggg taacggattt ttgtatctct tg
//
LOCUS       KCKM01002672            1013 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41942apa ultra-conserved element locus
            uce-5246, sequence.
ACCESSION   KCKM01002672
VERSION     KCKM01002672.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1013)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1013)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1013
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41942apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1013
                     /note="ultra-conserved element locus uce-5246"
BASE COUNT          296 a          185 c          201 g          331 t
ORIGIN      
        1 atgttttgac tggataacaa cagccagaca gcaaattttt tcttatattt catcttttga
       61 tcctgtcata ttagcttaca tgccataagg aataatatta ccaggagatc atttgatttt
      121 ggctactgta gggtgtggaa atcacacact gcgttaacag ccacgtagtg aaaatgattg
      181 tcagaattat tttaaacaga ttaagctgtt gctgatcgtt catcctcagt gaattgaaca
      241 aagctttagt aattgtctaa gagcaaaaga cttcaaaatc ttccatcttt tccttccgca
      301 acttaaatga aatctgatct ggaagataag gatgttacaa aaagacacct cttcatataa
      361 gcagaaaagg cttgaatggg ttaagccata tctggctgag tcccaacaga cataaaaatc
      421 acctgtgcct gctctgaaat aaatcagtgt ccttttctgc tgctgccgtt gtctggaaat
      481 aatgcaaatg caatgggcct gcagtgacat tgtgccgcac tcgaaggata cacataataa
      541 attgtcccct aatactgtta aagagacatt ttcgtcttac tcagtagctt ttgaggttga
      601 actgtgctac ttactcgttg aggactgtga tatggtgtca tgctattctg ctccgttatt
      661 catttagcct cttattgctt atatacacat ttggttcttg agtcttaaaa tgtgttttgc
      721 tgcttatgct caatgatagg gtgtttgctg gcacacagga aaaaagcagg gagttttctt
      781 tccacttttt tgctgttgtt ttaatcattt ctcttcaaca gcagctggaa cagatcgtac
      841 attcatatga tttggttcta ttgcattcat cactgggaaa aatgcatgac tgtgttaaag
      901 gaggacagaa agaatttgtc tgcccagcgg gaagctattg ctgttccata attgtttgct
      961 aaaaggcagc tggaataaaa atggaggtaa atgatcatct gtatgaatcc aat
//
LOCUS       KCKM01002673            1032 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41958apa ultra-conserved element locus
            uce-8017, sequence.
ACCESSION   KCKM01002673
VERSION     KCKM01002673.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1032)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1032)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41958apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1032
                     /note="ultra-conserved element locus uce-8017"
BASE COUNT          271 a          252 c          196 g          313 t
ORIGIN      
        1 atttctgaat ttcacaactg aatgccaatt tcttaattga accctctggt ttgaaaatta
       61 agatttcatg cttattgttt tagatagtta gctgaaggca ttcaccagac agtccaagct
      121 cttatctgta taggatttaa gtcagtttta aagaaaacaa taggggaaga aatcctcctc
      181 ccccccagaa atgtgcttgt ccgcattgtg gtggacgact tgctggtgca gttactcttt
      241 tgttaattag tggaactggc catgcaagtc aaccacagga gctaggcttt tgcccgccaa
      301 agaggtggga atttgctgaa ttctaatagc tctgcccact ttccctttcc atccaggcat
      361 caaggcatgg attatcatct tatttttcaa taaatgaata aatgttaaaa gataggaaga
      421 gagtgaggga gagaaggaga gaggttgtta gggatataga cctttaagca gcacttgagc
      481 aagacaagtg tgcctgtttt ttctacagag tacagttgac aaaaagcgtg ccagccatca
      541 tgagagcaat ggctttgccg gtcgcattca cctcttgcca gatctcttac agcaaagcca
      601 ttcctcctcc acttcctcca cctcctcctc cccatcctcc agccagccga cacccaccat
      661 gtccccacag acaccccagg acaagctaac tactaatgag gtatgtctta caccacagct
      721 ggctgctttc gtagggttat agcagcattg cctagtagct agtttgcaaa ggaactccag
      781 ccaatctccc ctgctttttt tttttccctg tcacttttgt tcccaccccc aaataacaca
      841 tttcagttct gcgtaagaag cccttaactc tagagcagtc ccacgccaaa cttgccagtt
      901 tactattttt gcttcctcct agtgagtcat taattgcatg gcgttttttt aaactaagct
      961 tgactactgc atttttcaag ccaatacttt atttttttta attctgtttt attctgggag
     1021 caggctaact gc
//
LOCUS       KCKM01002674             838 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41973apa ultra-conserved element locus
            uce-4587, sequence.
ACCESSION   KCKM01002674
VERSION     KCKM01002674.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 838)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 838)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..838
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41973apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>838
                     /note="ultra-conserved element locus uce-4587"
BASE COUNT          266 a          133 c          177 g          262 t
ORIGIN      
        1 taaacgtatt tatcagggtt tgcagccatc gctggcctat ttgatacttc tctttttaaa
       61 caaaaacact ctcagaaatt gatatggtag gcaaaatgat attcataaaa aatttaagaa
      121 ggagctctca gcatttaaaa aagaaaaaaa tttttttgaa ggagctgaaa agaaaaaggt
      181 cttggaatta caagcagtta gacttggggt tttgcgtaat gactcctggt atcccactgt
      241 gagaagactt tccccagctt ctcgtctgca ttcttcctcg ttccctgcgg gagaatgagt
      301 tggatttgtc tgccatattc acagcaatcg aggtgatcca ggttgaaaga aaatcaataa
      361 gatgtgtcca tttatgcctc acaaaggaag aaaggtctaa agaacagaca tgggacgtga
      421 ttcaagcact agagacttaa taagacttct acttgtgttt gaaggggatg gtaatttata
      481 ttttactttg aacttttttt tatgcttcat aactattggg attcgggctg acatgggaag
      541 caaggaaaag aaggtttgat gctgtcttag aagacctaac ccatttggga aggccatgct
      601 caaaagttca aaaaattttg ttttagaaaa gattaaagag acgtcatatc atcatactga
      661 tttatcgcta ttgataaaac tggtttaaag tattttggat tggggtacaa taaaaaaaag
      721 tctttcttcg agaacagctg caagtttctc attattggcc gtcttttctg tgtgtttgat
      781 atcattttgc ttagaaatag aggagcagtc ataataggta ccctggtgcc acttgaag
//
LOCUS       KCKM01002675             692 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 41989apa ultra-conserved element locus
            uce-7786, sequence.
ACCESSION   KCKM01002675
VERSION     KCKM01002675.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 692)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 692)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41989apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>692
                     /note="ultra-conserved element locus uce-7786"
BASE COUNT          245 a          106 c          112 g          229 t
ORIGIN      
        1 ttaacaaaag aaaatattac ttgaaaatgt aaagaaatca tctattttat tctaagtata
       61 aaaaataaat actccactaa ggaatggaag aaaaaataaa gcatatttaa ataatttcat
      121 tacattctat gatgccaaat catctgtgag tggttacttt ttagatgaaa agaaatcaaa
      181 atataggaca gatgttggac aaaccacatt tgaggtctat cacacactgg catttttcaa
      241 atgattttgg ctcatctatt aaataaggtg tattttgctt gattttgaac agggaaacat
      301 caggaaatat ttaaaggcca attgctgcca attaactttg atcagcaaaa gttgcatttg
      361 aatcttttag attcttttgc ctgtctggaa taacacacta ttctaaaata tagcaaaaca
      421 acaacttgat gattaatgtg tgttggcagc cccaccacaa gcttgcttaa cagttggatt
      481 ttaaataaac atctgtcttc attatgatgg gaaagaaatc tgactgtttt catgttttca
      541 ttttattaaa atatgatcag aaattgcttt ttttcctttt aagatggaac agttgggcat
      601 tatggtgaca gtctctttca gcagttcaga tagttttaga ctgatctcac aagcgtcgcc
      661 aaaccatagc ctacagaggt tgaaaaagcc tt
//
LOCUS       KCKM01002676             496 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42005apa ultra-conserved element locus
            uce-102, sequence.
ACCESSION   KCKM01002676
VERSION     KCKM01002676.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 496)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 496)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42005apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>496
                     /note="ultra-conserved element locus uce-102"
BASE COUNT          110 a          102 c          128 g          156 t
ORIGIN      
        1 aattataata aagaagaaga gtaagattta aaaaaaaaaa aacggaaatg ttagaaaagg
       61 ttcgttaagg tagtttgtga ggggctcccg gattcgtggc tgtccaagtt agaggtcact
      121 gatgtcacta cagtgatagt gggattggtc aggtctgtta aagtggtcgc agtgccgggt
      181 ggagtgagtg cgccgctgtc tgctgagggc ggtgccggaa gcgaggtgcc atcagcttta
      241 tcgacacccc cattctcctg ccgcaaaagg ttccttctga atttggctct cgcgttttga
      301 aaccaaacct gcaaaccaat cccaattgat tgctttaccg atgcttgttt tttttcgttt
      361 tgcttaactt ttgtctttgt tcttgctctt taggtttttg gtgtttcttt ttgtgtggca
      421 cgttgcctaa gtcacactat agcttccctt gctactggtg gtactggctc tttcacgggc
      481 gggaccctac ggacca
//
LOCUS       KCKM01002677            1033 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42021apa ultra-conserved element locus
            uce-5425, sequence.
ACCESSION   KCKM01002677
VERSION     KCKM01002677.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1033)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1033)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1033
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42021apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1033
                     /note="ultra-conserved element locus uce-5425"
BASE COUNT          308 a          202 c          229 g          294 t
ORIGIN      
        1 aatataagga tctttgtctg ctaaaaaaaa aggaagcaaa tattctatcc caaaaggtgg
       61 agcagtcttg aagaaaacag gttacccccc atcacccttt agtcccacag aacgactgtg
      121 cgcttcagca tggatttctc tgctagttgg atcccaggag gccttattga gtgcagcgct
      181 gctcggggag ttgcagctgt ataaagtggg gggggaagtg tagtttgtac gaattgttct
      241 ttaccttggt ttgggttcag cgtggcagct gcactccgac tttgtgtgtg acagcacaaa
      301 ggacagcaaa agtgaaaagc aagtcagcaa gaagagagac aaaagcaacg atcagctaat
      361 acagctccac atggcctaac taatttatga gaaaaaaact gttctgttca ttggatcagc
      421 actctgagga ggcaggtgga attgtaggaa gttttcattg agtctctgga gcaactaagg
      481 aagccactag agattcttct cagtttgaac tttatcaggg tctacgctta atcaatatgg
      541 tattggaaaa agaattaatt actaaagcag aataaaacag ctgcatttta aactaaggat
      601 ccatcaattc agtaatcttc cagttacagg ctaggtgccg tgaggatcat tttgacttca
      661 tgtaatgagg aactgaggga gtttcctcat gaacaggctg ggaattcaca ttagcctatt
      721 tcagctattt gtcatcagta caactcattt ctccccttct gaattacaat ttgtatttga
      781 tatactgtca aacccacaaa attcccatat tcatggaact gaaagcatta atgcggaaat
      841 cattgtcacc atgagaaaaa gtcttaacct tcctgagcct ctttattcta taggctgcgg
      901 ctcgagtggt ttcatgccgg acatacctct attgtgttca ttgtgagggt cagggacctg
      961 cctgttgaag aagcagtaat ttgaacacag cctgtaaatg tttcatctgt aatttccata
     1021 atggtgaatt tca
//
LOCUS       KCKM01002678             828 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42037apa ultra-conserved element locus
            uce-7417, sequence.
ACCESSION   KCKM01002678
VERSION     KCKM01002678.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 828)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 828)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..828
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42037apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>828
                     /note="ultra-conserved element locus uce-7417"
BASE COUNT          177 a          201 c          189 g          261 t
ORIGIN      
        1 catgttgtgg agagccaaaa ttttagtgtc gagctcagca tcctgcctgg tgcggttgtg
       61 cagtcctagg tggtacttgc ggaagtgttt gatgagatct gtggggtcgt tcccatagta
      121 accgtatcca cagatgttgc atttaaagtc ctgaagctct ggagacagag gcgccatatc
      181 tgggttatca tttaccaaca aatctgtttt agatttgttc agccttaaac ccccatctga
      241 aggcacttgt gggttttttg aggccatggg gaccgggctt gagccttggc catcagtttg
      301 accactttgc acttgcactg tttcatctga agcttttggc gacatctgat gctcctcatt
      361 tgtctccgct gcatctcctg acggggtaca gaccacatct tgggtgtcat ctgcatctga
      421 tttttgagga gacttcaagg gctcacagat tcccccaaca gctggagatg agaaagccag
      481 catatttctg tctgtcacct catcatgagg gaaggatgga acatttcctc ccttattgtg
      541 gctttcataa ttgaagccag ccttttcact cagcactgag cttttcaagt cctttttaat
      601 gctggaagat ggctcttgga catgcgtgca aagttcctcc ttgttattta actctgccgc
      661 atcaccctgg tcagtgtttt cttgcatctg ctctgcggaa aattcttttt tccttccaga
      721 ctcttcactt tcagtacctg tagactcaag ggtctgtacc tcaccttcac tagcaacgtt
      781 tcttagaggg gggttctttt tccggaccat atctaccaca gaaaaaga
//
LOCUS       KCKM01002679             998 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42051apa ultra-conserved element locus
            uce-6983, sequence.
ACCESSION   KCKM01002679
VERSION     KCKM01002679.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 998)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 998)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..998
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42051apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>998
                     /note="ultra-conserved element locus uce-6983"
BASE COUNT          277 a          221 c          220 g          280 t
ORIGIN      
        1 tagaggggag gagaaggaaa gaatcactgc aacttgggta ataattttat ttatagcctg
       61 ctgtgcacac acggctgttg gtgatgaggc taccagtgac ataaacaaac tgaagcgaaa
      121 gatgtaagcg agcggctatg tgtaaaggcg tctttgggca gtgccacgaa tctggacgtg
      181 gaccaagaga attatctatg tcccttgcaa tttccatgaa gagcacaaag gagataatta
      241 gagcggggtg cttcgcgatg ctcttcccat cttgcgcaca ttcgtgccca ccaaatgtga
      301 aatgttcgcc ttttcccctc caacgtgatg gttgttgaac ttatttttag tgtcatttga
      361 taagcctccc tgctcgcaga gagacatccc actgacccag ccactggtca ttgtctatac
      421 cggttcccat caaagcgggc gcgctttgtc aggtttcgac tcgaatatcc attttgcatc
      481 tgaagtacag tatcgaaagt gactggatca tttgagcctt tttcttcagc tgctccctcc
      541 ttcctccccc acagtgtttc cgctcacgct aacataattt ggcatcgtcg acgtgacacg
      601 acactggttt ttctaaaaaa ttataataca tacattgtca atgttttgtg atggccggcg
      661 ctcccgtaaa tttaatttct aaattgatgg agggaggtct ttttccactg ctgaatccta
      721 accaaggctc ggtgccccct cgaaaaccga gtaatgcaca tacagtaata ggtcattcaa
      781 tgtcaaaagg cataaaaaag atgagcaaaa tcttcacagg ctgctgcttg ctgttgcctt
      841 taattatatt aattaaactt tgaaattctc atgcaaagag agttgctggc ttgtgacgct
      901 gaagagccct tggagatttg gggggaaaaa aaaccctgag ataccagctt agtggctact
      961 gcttttttta atctagaaaa aaaaccgtaa aaaaatac
//
LOCUS       KCKM01002680             736 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42066apa ultra-conserved element locus
            uce-1119, sequence.
ACCESSION   KCKM01002680
VERSION     KCKM01002680.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 736)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 736)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..736
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42066apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>736
                     /note="ultra-conserved element locus uce-1119"
BASE COUNT          231 a          147 c          168 g          190 t
ORIGIN      
        1 aatcgatttg ctaggggctt tatttattta tttatttggt ttactcctct ggcttaaaga
       61 ttagatgttt tcttttggta aagctggatc taccaagtgg cattggctgt attaaaataa
      121 ggaagaacct caatcaaaaa gcctctccta aggcaagctt tcttgttaat atgcaccaac
      181 atgaaaggct ttcttttcat cctatacaac tacagtgtgt gtaaattgca gggggctcat
      241 tggcataaat cttggctgtg acctctgagg taaactggat ttacattact ttctgacaag
      301 aattaaatga aggccttgtg gatatatgaa cagccttcta gactgcaaca gatgggcatg
      361 aatgtgctcc ctaggcaaac tatcagtgac atctgtgtcc tccaaattct ggtggtctca
      421 gccaattagc aggcaaaagg aggaggatga aaaaaaaaac cagcctctgc tcagctccct
      481 cagccagagc tgaagcagaa gtgcttctgt ttagaaatag gatcaagaac agcctccagc
      541 agcaaggagg tggtcagccg gccgggtata ataaggagct aacactacag agaaagccaa
      601 agtaattaga tagaacagat attaatatta atacaggaca aatgccagcc tcagctaagc
      661 cccgtgctgc atttacgctg ctgcagcaaa gagcaggggt ttgtcaagcc aaaaagcaga
      721 ggaggggtca cagaaa
//
LOCUS       KCKM01002681             884 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42081apa ultra-conserved element locus
            uce-520, sequence.
ACCESSION   KCKM01002681
VERSION     KCKM01002681.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 884)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 884)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..884
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42081apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>884
                     /note="ultra-conserved element locus uce-520"
BASE COUNT          266 a          155 c          182 g          281 t
ORIGIN      
        1 cacctgggtt tggttgagaa aaatgttgga tctggaggtt attgtgaaga atctgaaaag
       61 aggagtcaca gcagccacac aaaacattga aacacaatcc cttaggaaca aaatctgaca
      121 ttgaccctgc cacagaagga agagccacga ggcaatgggg aagggaaata aaactaagtg
      181 gagtgggtgg gttggctgaa gaggatggga gtatgaagaa gggggggaca atattaaaag
      241 aaatatcaat caattggagc atattcactt tctcctgcac agtagattct atcagaagaa
      301 aacactgaac tttgtagtgt tagcagcagc tgaaatttag aattattgtt tcctcctaac
      361 agaagactca ttttccacgg ccgcatttgc agcataataa gctttttgtt attttttcaa
      421 ttagagtcaa ttgacctaac aaaatggttg gcaattaagt gatttttgta atggtccggg
      481 ggtaatttag tcgagcttgt cagctgtgtt tcatgaagcc gagatgtctt tttttcccac
      541 tgcctctctc tccctctctc tcacttctct ctctctctca ggcataatgg ctcataattt
      601 caaaatcttt tccttctgtt tccctcacaa taattcgcaa ttacaggaag ttgttggagg
      661 tgattttttt tcctaccttg ctttttgagt cagtaatttt aaataaaatg tacatacttg
      721 taaaaagggg gctattacag aaatcacttt ttgtgtaaac tcaattattt tatgaatagt
      781 gacaccagtt tctgctgggt tcaactccta aaggctgatg tattattatt tgcagggtaa
      841 aaggttttga acatttagaa cattttttca aatcaaacca gtat
//
LOCUS       KCKM01002682             675 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42097apa ultra-conserved element locus
            uce-7344, sequence.
ACCESSION   KCKM01002682
VERSION     KCKM01002682.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 675)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 675)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..675
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42097apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>675
                     /note="ultra-conserved element locus uce-7344"
BASE COUNT          181 a          123 c          145 g          226 t
ORIGIN      
        1 gtgacgtgtc atttctgttg ttttcactac agccctgtgg aaaaactaat taccttttca
       61 tcttggtaaa ttcagaggtc agtttaccac tactatatca caacatgaca gggaacatgg
      121 gtaattaggt aggctgtgta acctggatat tccatggatc tcattacatc ttatttagaa
      181 aggctataat ttgattggtg gaaaattaag gcatctcctc atgggtcatt ttatctttct
      241 gcaataataa ttcttggctt gattaaaaat tgatccagtg tcttaaagtg aatttattat
      301 tgctgcaatc tatcacccac agacagataa tctggttccc atctttatct gatttgaaaa
      361 atctgtcact tattatgtgt tgttttttcc ccaatcattt aaattgatgg tttgctgagg
      421 caaggcgtgc taccatagcc ttcttggaga aagcatgtac gagacgttaa gccagcgctt
      481 ttttattgca aggaatctga tactatgtca agtattgatt ggaaccgtgt tggggcattg
      541 ttttctcaaa atcaagcaga aatttcggat gcagggggac agacaagtca tattgttgga
      601 gacaacagtc cgtgcgtgcc tggtgctggg agaaattcca gctttgcgtg ttgcagcttc
      661 tgccgagtgc agatc
//
LOCUS       KCKM01002683            1025 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42113apa ultra-conserved element locus
            uce-7763, sequence.
ACCESSION   KCKM01002683
VERSION     KCKM01002683.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1025)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1025)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1025
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42113apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1025
                     /note="ultra-conserved element locus uce-7763"
BASE COUNT          330 a          211 c          194 g          290 t
ORIGIN      
        1 taatgtaaag ccatcagtca cattttatag taagcaaagt aaaattgaag aagtaaagac
       61 aagctaataa aataattaat attagtggaa aataactggt atacagtaac aaatacattt
      121 atgtagacat accacttaac tctaaaaaaa tatatacata catatatgat ggctacaaat
      181 gagcttgtga ttttcttcca aaagtatttg agcaggaagt aaaacatttt cccagtggat
      241 gaaataacat tcatttttgc caatctaagc aaggcagatt taaattttat gtgtgtccaa
      301 ctgcttgttc cccctcagct aataacctgc ctgctggaaa catttcaaat gaaaaggagt
      361 tcacagttcc taagcccagc tctgaatata tctgccatgc atgtaaacaa gtaaaccatt
      421 atgtttcttg ttgagataaa gaataccatg ataagtgggg acttttacaa aacaaagggc
      481 ttcctattgc gagtgtggat aatcttccag aaaaccctgt gttttggcaa atcacaccag
      541 attaatctat taggcatctc ctttcatcat caaatttccg ctgcctatca cagtggctgc
      601 cttatcaagc acccttttct caatagcggg cccattccta ggatttcagg tgctggcctt
      661 ccgcgctcag aaaacaggtg tccccactgt tttcaggcag gaaaggtccc tgcacagaag
      721 cctgggaaag ggcaggggta tcagctgctg ttctacctga aggaacaggt aacaggaaac
      781 tgttgattca acggactgaa cttaattggc acgcattagt cagcactcag catttttttc
      841 tttttgtgaa ttaaaaatcc tcataagaat tctcccccac aaaagtttca aaagggggga
      901 agatacattc ccagagatgc cctcccagaa gcagccagtt cttgtaactc tcttttaaat
      961 gccgcatttt cttggtgtat tccagaaaac acaagctagg agctgagggc agagtgtcaa
     1021 gttgt
//
LOCUS       KCKM01002684             842 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42128apa ultra-conserved element locus
            uce-6648, sequence.
ACCESSION   KCKM01002684
VERSION     KCKM01002684.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 842)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 842)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..842
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42128apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>842
                     /note="ultra-conserved element locus uce-6648"
BASE COUNT          299 a          146 c          133 g          264 t
ORIGIN      
        1 ccattagtac cactttgtaa acagattttg agatgacagt gcaatctttt caaagcaggg
       61 cttcaaacac agaaatacac acacaaatgc atgcatgcat tcattccact tttatgactt
      121 tggaataaaa atgcaaatga atttattagc tttagcatgg caccaaatag aaatttatgc
      181 acatacattt aaaaaataga ccccttgaaa ataaagcagt tgcagcctat taattttctt
      241 ctttgacagt ttttaaaatt cccctaaaaa aatgaaacag catgaatact gtcaatatat
      301 cacaacagcc acattaggtt ttgtgatata catcataata taaagagcac tattagagca
      361 caacctggga accattaaat cattctaaat cactgttaca ttccattagt gtcaatggtg
      421 aaaccacata ataggcttta ttacaaactt caccttggta ggccattgtc tctaataacc
      481 acttctctat gatgtggtat catacccaga aatccaggga gataataaag gctcccttat
      541 ttctttttta ttggatgggt aaagttaaat ttagctgtaa gtaaaaaaaa aatcttgaag
      601 ctttgttcac taactgtgag ttgctgctat ttggacaaaa aaaaaattag gcagacttgg
      661 gagaacagtt tgaaataaat ttgaatcctg gtaaatgctt gaggccaagg taagataggc
      721 agtcccagca attacgatgt cattttttga aatgcagctt agtgcattta tgcccttctt
      781 tatacttttg ttcagataca aagcattgat tatagaaaca ttacaggaat taaatctatg
      841 tt
//
LOCUS       KCKM01002685             612 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42142apa ultra-conserved element locus
            uce-897, sequence.
ACCESSION   KCKM01002685
VERSION     KCKM01002685.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 612)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 612)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42142apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>612
                     /note="ultra-conserved element locus uce-897"
BASE COUNT          183 a           89 c          103 g          237 t
ORIGIN      
        1 caagggaatc taagttggaa tttagagagg tcagactaaa caaggtttta acttactctc
       61 cctcgctccc ccatatctct ttaatttgga taaagtaaaa aaaaaagaaa aaaatcataa
      121 taaggcttct tttaaaaaag tgtatgcgta tatagaatca attcattgac tagtcttttt
      181 ggggtttttt aagcattcag tctaagtggg ctgctcagtg aaatttgtac attcataaaa
      241 tagctgattg aaaagcaata tttcagataa atacaagcca gcgatctatc agcagttgta
      301 ataaaagctg ggcttcaggc tgtgatttta ttttgaaata ataagaattg ctttattctt
      361 tttacttgag ttaccatggt aattctgtcg tgtagcagtg ttatattgat ttagaaagtg
      421 gacagtaata tttcttttgt gttattctgt ttctaggggt tgatttctaa tttccacttg
      481 gagattactt ttataaattt cttaagtctt tccacttttt tctctagcag tgtaattttc
      541 ctctcacaca ttgctatttt ctgagcttat tggtttgctc ttattttaaa ttaaacttgc
      601 tggtttcaaa ta
//
LOCUS       KCKM01002686             728 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42157apa ultra-conserved element locus
            uce-5500, sequence.
ACCESSION   KCKM01002686
VERSION     KCKM01002686.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 728)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 728)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..728
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42157apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>728
                     /note="ultra-conserved element locus uce-5500"
BASE COUNT          204 a          168 c          141 g          215 t
ORIGIN      
        1 acatgataac ttttccatgt gttgggtagc tcccattttt caccgtgtca gttttctaat
       61 gcggattccg ataatgaaga aagtatttcc ttaggggaga aaacttatca agatgctgag
      121 ctttttttcc cggtgaccaa ttgcatgtca tgaaaatcaa ggtccgatgc tggctgagga
      181 caggagcagc tgcacaagtt caaaaacctt gctgctcagc aaggtcccag acaattttta
      241 cttacctcta gtgtagtcaa tacaatcttc tcaactgaag aaaaataagc ctcccacaag
      301 aactgtgtct gctgtctaag tgctaggatt ttatcctgat ggatagacct gattgtagaa
      361 ggaatctgta atacaagata taatagagtc agaaaacaat gcaatctcat caaattaata
      421 tgctgctgac aagccctctc ctccattagc aagccgcaca gcttcagcgc tcctgtccga
      481 cagagatgca tgtgtcaaca gttaaagtct tgatgtaaaa tgaatgagac acaatccttc
      541 gtgacctttg gtactgaata tatgattttc tttttattct gccttctttt agcttctggt
      601 tcttctataa aagctccctc tctccagcgc tgtggcgcag cacagaaagg agctcctcca
      661 cacacccctc atgcactttt catgggctgc tagtttagca aactagtacc tcaagttctt
      721 gagagtcc
//
LOCUS       KCKM01002687             485 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42173apa ultra-conserved element locus
            uce-1692, sequence.
ACCESSION   KCKM01002687
VERSION     KCKM01002687.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 485)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 485)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..485
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42173apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>485
                     /note="ultra-conserved element locus uce-1692"
BASE COUNT          160 a           69 c           70 g          186 t
ORIGIN      
        1 cataaataga atttgttcag gaaataaaaa tgtattgttt tcattgttag aggatgctac
       61 taaattggct gtatgtttgt ctaataatca catctaaagc tgattattct ggtaatagcc
      121 ttaagatatt atttaaaaat aaatatataa atgcactact tttgtactaa tactagtttt
      181 taatctcttc ttgtttctat gaagtctgaa tgagattttc aaaattgaat aataatttga
      241 tccgttaatc ttttgaagct agtaatttta ttttcccctc tttgcagtct ctgaggctca
      301 caaatgaata gagcttcatt actggagtct gcatttaata accattatcc attatcttgt
      361 aattaagact ccctgtaacg aatcatgagg acaatgcaaa aatacatagt acatttcttt
      421 aatgaactgg aaaatgttca tcttgttcta tttagtaatg agttgctgaa tagtcgttaa
      481 atcca
//
LOCUS       KCKM01002688             885 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42189apa ultra-conserved element locus
            uce-5584, sequence.
ACCESSION   KCKM01002688
VERSION     KCKM01002688.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 885)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 885)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..885
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42189apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>885
                     /note="ultra-conserved element locus uce-5584"
BASE COUNT          239 a          224 c          192 g          230 t
ORIGIN      
        1 ctgaggcgcg caggagaaag cccacttcaa acctttcgga gaagagccta gagaacacag
       61 cccgaagccc agctgcatct gttgcaacta ttcgctagcg aggtggattt atacaatttt
      121 tttttttttt ttcccccctt cagctcgagt tgcgttttct aagaggacgg cacttgaaaa
      181 ggattcctgg agcccgagac gcacagctct gcttgtgtcg gccaacaatg gaggaatccc
      241 cctctccaag cacctgtaaa ctgacactgc aaaccagcca ttcgaaatgc tcatcagcag
      301 gccgtatatt taagcacaga gcattgccta atctattttt ttttcctccc cttcttcttt
      361 taatagatcg gagcacaaaa gcctgagaga gggtgaccta cggaacaaaa gagcctttga
      421 gttcctagga aaagtagact tggaggagga tggaaggaat ccaagtggcc ctattatttc
      481 cacttgcact aattagacat ttttctgtca gctattgagc actgctgaga ggccaaactc
      541 actgaattca tttctaaagt gtttacagaa gtttgcatct gtttgtgtct cttcaggagg
      601 aaaataagca cttcaatagc attgtggaaa atctaaacga agcatcctat tctgaagggc
      661 ttggcagtct tgcagctgca taatttaact ctcccctcaa tgcccaaacc tcttgtgtcc
      721 ctctccaaac ccaaatggac acaaaatgta gaaaagtcaa gacagggcga gagacttggc
      781 tatgtttttt aaaggcaggg ctgcatgctg tgtggcacac agaaacacgg tcccgtgtca
      841 atcctcgcaa ttaccgtccc cccccgcccg ccttgttccg agcag
//
LOCUS       KCKM01002689             690 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42205apa ultra-conserved element locus
            uce-7281, sequence.
ACCESSION   KCKM01002689
VERSION     KCKM01002689.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 690)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 690)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..690
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42205apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>690
                     /note="ultra-conserved element locus uce-7281"
BASE COUNT          243 a          119 c          103 g          225 t
ORIGIN      
        1 caaaaataaa aatactctac taaggactaa catatgtagt ttatacagaa taaactttct
       61 ggaaattgat cttttcagta gttcaggtta tgtcttaatg gacatgacta attcagctta
      121 gtgttaacta aagctatgtt tgatttttaa atactgtaca gtttaataaa taaaccaaac
      181 aaagcctcaa tgtagaacag tcactgccaa tgtcacccag aatccctgca gattatgaga
      241 atttaacaaa tgtattccag tggtctgcag atttttcctc tacatacagc atttaaaaaa
      301 catgtattaa aacagaccag tttccagact aaactaatgg agaaattaca tttcagtgca
      361 aaatatttta gactgcattt ctttctagta ttcctcaggt gaagaagtgg ttgcatatta
      421 ttaaaaatgt aacaaaagca gctaatgctt tcataaagag tattatgtta gggatccccc
      481 tcacatcttt gccatatttt gaaaacaaaa taacatttcc tatagccagc aattttgttt
      541 atttaaatgt tacatatact atctcaaggc acatctgatg atatatttat aacacagtag
      601 gtgtcaaagt atgtttaaca tatgatttct tcaggatccc tcccctttct gtattccaaa
      661 atggaggaac tgaaagtgcg gtgtcaagac
//
LOCUS       KCKM01002690             917 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42220apa ultra-conserved element locus
            uce-2814, sequence.
ACCESSION   KCKM01002690
VERSION     KCKM01002690.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 917)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 917)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..917
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42220apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>917
                     /note="ultra-conserved element locus uce-2814"
BASE COUNT          200 a          286 c          258 g          173 t
ORIGIN      
        1 ggttctgagc ccaaattcag caccaaatcc caaaactgga aaaaggctga gcaagaggtc
       61 tgtgtctgtc atgctgtttg cttccagcct ccccatcgtg ttcccccacc cagggatggc
      121 acacatggct acgaggtgga aggggactct cagagcagca ccagcctccc ggctctgccc
      181 atctccggag gcggcaggga caggcaggaa acagggcagg ctggcagcct cacagcagcg
      241 ctgcccgtac ccgggggaga cggggcctgg gtacctgact ttgctaatta acccacgagg
      301 aaatcacccg tcgacacagc agctcactcc tttaagagag ctgcctccgc ctctccctgc
      361 gagaggctga gccgtgcctc gccagagtgt cttcgaagga gaaggctatc agctccaaac
      421 agccgagacc tttagctcaa atccattaat cctctttatt aaacccgggt cacctctgag
      481 tcctggcaaa ttaaccagca tctccccact gcaagtacat caagaggaaa cgcgctgtac
      541 agcgcctgta attttcatgg accagggctc cggggtcaga gggcttcccg ggctccattc
      601 tctgcctttg tcaatttaaa agggaacatc ggctcgctct tgtataaatt acgagagagg
      661 cagagcgggg gcccggggtg gtcgcagggc actttgccgg ctacagccgt gccggtggct
      721 cctctcctgc ccgaggacgg gagcagggca cgacgagacc acgagcaccg agtcccgagg
      781 atgaaatggg gttggggcca tcctccgagc acaccctcca aacagctggg cagccggggt
      841 gccacgcttg gcatcctccg aggccacctt ggccacgtgc cttctcgctg cttctaataa
      901 atggcacatc ctcggtg
//
LOCUS       KCKM01002691             678 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42236apa ultra-conserved element locus
            uce-6902, sequence.
ACCESSION   KCKM01002691
VERSION     KCKM01002691.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 678)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 678)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..678
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42236apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>678
                     /note="ultra-conserved element locus uce-6902"
BASE COUNT          218 a          119 c          121 g          220 t
ORIGIN      
        1 atctggtgac tgcctattaa aataattgtg tttccaaatg aggagacttt ccatatagca
       61 agtagttcat gctgctaaat tatttgacaa aatcttgtag tagtaatagt tgtactagta
      121 gtagtagtag cagcagcact aatagtaaat gttttggatg ctcactttga actaaaaaag
      181 gacagttatt taaaatccaa cacaagagtg gtggggaagt tttaatagga atatgcttga
      241 gctgctgttc cttaccccaa ctgaattttc tccacagctc catattttgt tcttcatgtg
      301 tattactgtt ctgagagcct gtcatttctt atcagaatga gaaaggctaa agagataata
      361 tttcaataac atactggcct gatcataaaa taactcaatg gaaatgtgta actgcctcag
      421 gcagcacagc aggatagtca gcagtcagat gatttctatt ctggagggtt ttttttttta
      481 tggttacatt ttctgttata tcagacatac cctcaagtct tagttatgct tttattcaaa
      541 aggagcacca cagtataaag acctacaaaa cttattatga tacattactc taaagaaata
      601 aaagttggtg ccacaatagc atattgataa ggacaagcct gccacattaa ttgacctttt
      661 ctcatctcat ccaccgag
//
LOCUS       KCKM01002692             897 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42252apa ultra-conserved element locus
            uce-3644, sequence.
ACCESSION   KCKM01002692
VERSION     KCKM01002692.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 897)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 897)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..897
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42252apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>897
                     /note="ultra-conserved element locus uce-3644"
BASE COUNT          319 a          158 c          156 g          264 t
ORIGIN      
        1 atctaccttc caaatttagt attacacatc tttatatcaa aatctaattt agaacagagt
       61 taagtagaat aaatatgtcc ctgcattgct ttcctcattt cgcttattgc tgttccactg
      121 atttcatctg ataagagcag gagcaaggta agcatagaag gaactctgaa tgtcttatca
      181 ttgtctttat tcaaccaaaa aaatttggta attttgatag gatgagacct cacttgtagt
      241 acaatattca ttgaccctga aatatataat gtgaagtaac cgtgagatac atgacctttg
      301 tgggcaacaa aatatcaaat tcacataagg aggcttcaca tttgaattac gcaaaaatcc
      361 aagatatttt gaacatacat tagggcagga tatggtcctt tgaatgttat tctcaatgct
      421 cgtaccagca gcaaccgtca tctgaaaaag ggggcaacag agattccgct gaatggaaca
      481 gaactttgca cagagctaca gtatattcaa attacaccat gctaacaaga tgaatgttat
      541 tatcattcaa acaagacaac agaagagtgg ctcaactgaa aatcacacaa aaaaattgaa
      601 agtattgtta catcttctgg ctcatgaggt gctgagaaca acgaaatagt aactcacttc
      661 tttgttctat gctgtgttca cacaagtgaa ctctaaagca ccagaaaaca gtcagataac
      721 tatggaggaa gagtcctctg tggctaactt tagtctggag tttctacata aaacaagagg
      781 ttcatctgct tgtgaggttt gaagaaacta agatctttgt caaattaaag catcttatgg
      841 aaaaacatca aaagaagtaa accttctaaa ctattagtgg aatttaacta ttaattt
//
LOCUS       KCKM01002693             854 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42266apa ultra-conserved element locus
            uce-6715, sequence.
ACCESSION   KCKM01002693
VERSION     KCKM01002693.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 854)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 854)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..854
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42266apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>854
                     /note="ultra-conserved element locus uce-6715"
BASE COUNT          280 a          157 c          139 g          278 t
ORIGIN      
        1 tatattttga acaaaatctt tctacttcat gtcatcacag atgtttcata gggtcccgtc
       61 aaggtgttga tgcaaagccc attgtgtgtc ttcctgttat atttttcttc atgagccata
      121 tccactttaa agactaaatt aaattatcat cagactatca ccgaatacaa aacactgtaa
      181 aaaggttaaa ctctctcaga tggggtttct ggatatttat acggaattac aaatgttcct
      241 gttagaaggt tatccttgta cccatagatt aaggccgctg catgaacact cttttgcaaa
      301 tcaatattaa ttaaaaatta ttattatcag agaactaaac aaagggcctg tgctactaaa
      361 gaaagggtat gccccagtga cagatcactg ttaaactctc tcatgccatt gggtgatatt
      421 tgccatatgt ccaatgattg atagtaagat ttaatgagtt cttacaagca attaaataat
      481 caagggttcc tgctgttaca tggcatagct tgatagaaca gtgacaaatg agagaatatc
      541 tgcaacctaa tcaaagggac atatttcctt gggaacaaaa taatattatc caccagtgca
      601 atcaaaggac aaaagaacac agagaggacg caacagaatg agataaattt tgtgctcttt
      661 tcattattct ggccatacag tttccattta ttgaatccta ttaaatcaga aagaaaatta
      721 ggctacttaa atatgtttca tttgtcatac actgttagct agtggctaca tatccatatc
      781 cagtcacctt aagtctcctt tcctcatgaa accttatctt aggatatatt tgctgtcttc
      841 ttatttggta ttta
//
LOCUS       KCKM01002694             380 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42281apa ultra-conserved element locus
            uce-8010, sequence.
ACCESSION   KCKM01002694
VERSION     KCKM01002694.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 380)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 380)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42281apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>380
                     /note="ultra-conserved element locus uce-8010"
BASE COUNT          108 a           73 c           85 g          114 t
ORIGIN      
        1 ttttttaacc agtgaactca gaagagaaag cttcattaaa ccaagttcta aaattgttgg
       61 ggaataataa gaacaataaa aaagactaac gagtttatgt taaattgtga gaatagaaca
      121 aaagggaagt gaaggggtcc ttattttaaa gctgggtttc aaaagtttga gagagcctaa
      181 agaatacatt ctcagagaca gcgttcaacg gttgcctggt cctcgaacag gtgattggct
      241 tggtggatct tctgcatata acttcaacag gtgctcacca cccgtctctc tgtcgcacag
      301 tctgtctttg gtctggcatc tgtctctgat gggccatttc ctaaaccttt attttcgtct
      361 cggctgaggc tgtccgcttt
//
LOCUS       KCKM01002695            1004 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42296apa ultra-conserved element locus
            uce-5921, sequence.
ACCESSION   KCKM01002695
VERSION     KCKM01002695.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1004)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1004)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1004
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42296apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1004
                     /note="ultra-conserved element locus uce-5921"
BASE COUNT          249 a          234 c          191 g          330 t
ORIGIN      
        1 attagtgcgg gaagattgga gtcagactag gatttctaaa tttctaactt ctggatacca
       61 gtgtggcatg gaaaggcatt cagtgtcttg ccactgtttt accttgaaat gcacattgac
      121 aggagatcga gtactgtgca attggtcctt ttatagggta ggcgagggcc cttggttaga
      181 gaacagctac aggcgaatgt gctaacctgc aaggcatggt gctgtcggtt ctcctcttca
      241 caagccatgc tgtcgtccct tcattttcca cctctccatt tttgctcatg ccggttgtct
      301 aatttttccc tctctcggta tattgagtcg agcatgtcag ttcccttttg cagcctttta
      361 tgttcatcga tcagacgctg tcatctcctt gactatcctt atctgcaact gaaccttcca
      421 aacctgtgcc tctctaccct cctgttccac gaacccctca gtacccctta ccctgggctg
      481 tcggcataat gaaggcttga tttcaatact tcccctcatt tctctgttca ctgctctgca
      541 ggttaatgca gattccaaac ttcaacaagc agctgttaaa catgtcatta acactgcttg
      601 ggctgcaaat gaaactctgc tattgggatt attccgggag ctatagtttt gtgatgagct
      661 ttgtcaatca cagctgacct gctgtgtaca gaatgaaact cagattatct tctttcttcc
      721 tcagactctt gtcatttttt tcacaaagaa ttactattct actccccgaa agattgatta
      781 cttgcacaaa taagagagtc tgagacatta atacaaaatt cacaggcttt tctttatctc
      841 aaacctgcaa ctccctctac atttcctcct ggtaattata ttagaattgt gtacactagg
      901 aattgccatc tgattattat gaaactagtt ttgtcatgac aaaaatgagc ttaagtcttg
      961 tttttttgga aaatgatcag tacagtgcac tggatgagag agaa
//
LOCUS       KCKM01002696             497 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42312apa ultra-conserved element locus
            uce-2094, sequence.
ACCESSION   KCKM01002696
VERSION     KCKM01002696.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 497)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 497)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42312apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>497
                     /note="ultra-conserved element locus uce-2094"
BASE COUNT          166 a           80 c           90 g          161 t
ORIGIN      
        1 aaaataggta tattcgtact gatacttgac agactttgta aatattattg ctttaactat
       61 cctgtgcaat tacacagccg ggtcattcag cattaatgat cttgtgaaca actatctaaa
      121 gccatctaaa tactgatatt tctgctcact taatgggcat tcctcatatg accagttaca
      181 agcaatgaga gttcacttgc tctaaattta tctgaacctt gggacaggag aactgaaaac
      241 tccttcactt tatgagaact tttgattagg gtttgggtag gtggataatg aaagagtgaa
      301 acattgaaat gtgcctaaat aacatgctgt tacaagcctt atgatagatt tgtgtttgac
      361 ttaacagctt ttggaaccta ataaaaagaa cttaattgac aatttcttga aattgctaag
      421 aaaacctagt gatgttggta gggtataata aggagttttc tcatcactgt cttcaagatt
      481 gagcctatac aaaaaaa
//
LOCUS       KCKM01002697             259 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42326apa ultra-conserved element locus
            uce-4463, sequence.
ACCESSION   KCKM01002697
VERSION     KCKM01002697.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 259)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 259)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42326apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>259
                     /note="ultra-conserved element locus uce-4463"
BASE COUNT           87 a           52 c           38 g           82 t
ORIGIN      
        1 atacacatag ttaatcccag gtacaccgaa tccagttcag ctattttctt tttcactaga
       61 tacccacatg ttattagaag tacacagcta accaggtttc atgcagtaga caaaatagca
      121 ttgtgggatt acattagtcc gacagctgct ttatgactat agcttccaga ccaatttatt
      181 taatattgat ctttaaacaa acatcagtac aaataaattt gagcactcta gtcctcagat
      241 tttgtatcta taaaagagg
//
LOCUS       KCKM01002698             470 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42341apa ultra-conserved element locus
            uce-7426, sequence.
ACCESSION   KCKM01002698
VERSION     KCKM01002698.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 470)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 470)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42341apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>470
                     /note="ultra-conserved element locus uce-7426"
BASE COUNT          125 a           95 c           82 g          168 t
ORIGIN      
        1 actcttcaca gtagttagaa gtgaacacca tgtatgtatg catgtgtgtt acagtaatct
       61 catgtttatg catgaggtaa caaacatgct taggtaacag ctttttcctc ttgggcagtg
      121 ccttatagtc tttctccatc agtgaaagcc aagaaaccat ctctaagctc atttaagtgg
      181 attttgttct tggtgatcca tgaaatgctc tgtcttttta tctgctcttt atacttctaa
      241 tgtattcccc atagaacaga agtgtgcttt tcctgcagtt taagactaag gttataaata
      301 acatcagtat ggggtagtga gcttgcagct cacattttgc tcaatgattt tcggtaaaac
      361 ccattgattg ttgttaaata caagaagctc cataggatcc tctcacttct atggtctccc
      421 ctactgtttt ttcttataag atacctccct gtggaaaata acctttattc
//
LOCUS       KCKM01002699             902 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42356apa ultra-conserved element locus
            uce-3231, sequence.
ACCESSION   KCKM01002699
VERSION     KCKM01002699.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 902)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 902)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..902
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42356apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>902
                     /note="ultra-conserved element locus uce-3231"
BASE COUNT          262 a          210 c          185 g          245 t
ORIGIN      
        1 tggtcactca tctcgcccct ctcagatctc ggaagggggt ggcgagcaac acagtgaatg
       61 aaatatcaag caaattcaca tcaaatggct gcgtgacccc cccaggtaac aaacaagcag
      121 taggcgtaaa agcgttcagc cctgtaactt gtccttctcc tcgggttctg ctcttgccta
      181 ctttgtccat atgcatattc aagcctggct aattctgagc gacctcttaa cgacacaccg
      241 acgtggtgat tcttaattag gaatgccacg ttggggggaa aaggagaggg gaagaatggg
      301 gcagaacggc agcgaggagc tgtttttgtt gatgcctgta gtctcggcta aaatacagct
      361 cctgctgcag ctcttccagc agcacaagct gaatcttttc cctcatttga tacagtgacc
      421 tctcaagtgc atcattgccc tgagggctga gggcagtcca gcaactgtta aaccccttgg
      481 gttgataatc ttctcccaca tttgccctta acaccagaca taccaccatt agctacagct
      541 ccactggtgc tcattagagc cgatcaatat agactaacat aaagaatgct gctgcacctt
      601 ctgttatttt tcagttactg cagatttaca gactctcacc tacaatacaa ggctttgctg
      661 ctacactatg taaaaaagag gatttgaggc aaaaaaaaga aaaacccact agtttttatt
      721 agatgcctaa atgttattta tcttgctgct caaaatacct tgttactaaa aagtgtctgg
      781 aagatgctcc gtacaaaatt ctctttggat taagttacca taaaattaca acttttacaa
      841 atcacagtgg ttgtattgat aaacaaaatc aggcatattt taatacgaca gagggtatga
      901 gc
//
LOCUS       KCKM01002700             881 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42371apa ultra-conserved element locus
            uce-4650, sequence.
ACCESSION   KCKM01002700
VERSION     KCKM01002700.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 881)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 881)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..881
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42371apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>881
                     /note="ultra-conserved element locus uce-4650"
BASE COUNT          272 a          162 c          139 g          308 t
ORIGIN      
        1 tcctttcttt ttacgaatta aacaaagaaa atgtgaaatg gactcatttt acatgcaggg
       61 taactatcaa gaacatgaac aattactgag cccatgatat tacacaaata aataacactt
      121 agcattatct tcagcactat catatttatt aaacagtgac tgagggcggc agtaaccatt
      181 tttattgtcc catatagctc ttattttcta attaaacaga aggttatttc cactgccaat
      241 gcagccattt atcttatttg agtgttacat aatatttttt gccagccaag cctgactata
      301 aagtgctctg tgtggtgaac tgtggcccaa cttgctttcc tgtttggtaa tcatagaaat
      361 gggccatttt gtgctgtgtt aataaataaa cttttagcaa tttctcctaa aacatgataa
      421 agcttatact ttgtcctacc ctctagcttc aatacaaggg caatgagctg tattattaaa
      481 gatataggtc aagcaaacct gatgatttca atcctgtggg gtgctttaga aactgttgtc
      541 atattactga gatcattctg ctgttcctaa ttattcctct cggttgcttc acatttcaag
      601 tgatttctct cacacttatg tcaaaattta taagctgctc tgtgtaacaa cactacatta
      661 tttcctcact tgttatggta atacaggaca gaaactagga gaatgcttta atctagctga
      721 cagggataat gtagtctaga aatgtaataa actttgtatt ctactacaga gttgtgtttt
      781 ttttccctac cgtgaaacat ttcatacaga tagacatctt agaaaaacta attgctatga
      841 taacttgaat atcctcttat ctgagttgct tttatcagaa a
//
LOCUS       KCKM01002701             618 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42386apa ultra-conserved element locus
            uce-5261, sequence.
ACCESSION   KCKM01002701
VERSION     KCKM01002701.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 618)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 618)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..618
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42386apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>618
                     /note="ultra-conserved element locus uce-5261"
BASE COUNT          195 a          115 c          113 g          195 t
ORIGIN      
        1 ataaatttat ttacactttt aaaaagcact gccaatccca atttatcagt tactgtcttg
       61 tgacagttta ttcattgttc accgttagaa gctagaagtt acataggaag catgattggt
      121 gatagcttct ctatttcaat atggtataat agagataaca cagtgcccaa aagctctaca
      181 gccgcctttt tgtctgcttt gtctcatttc attactctat cagaatcttc atttaatata
      241 atccaaaaaa gcaaggtaat tgcttcactt atcagttatc atcgcactcg catacttatc
      301 atgtcaaaat tatttatgtg gatggccaag ttgatcttgc tgcatttaga agcttaaaat
      361 ctgaataact gttctgccag ttaggttatc aaaactgcag cataagcaat gagtttcttc
      421 tttctggatc ttcaagggag aatagggagc atctcactgc aggactagtt tatccatggc
      481 tgaacaccac tccaaggaga cttagagtaa ttctccagcc tggcactctg agtgctggga
      541 acaggcttta ttttctagat gaacagtaaa taaaaatggc atggtataaa tagagacaat
      601 agagagagac ataaaggg
//
LOCUS       KCKM01002702             794 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42402apa ultra-conserved element locus
            uce-3257, sequence.
ACCESSION   KCKM01002702
VERSION     KCKM01002702.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 794)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 794)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..794
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42402apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>794
                     /note="ultra-conserved element locus uce-3257"
BASE COUNT          271 a          140 c          129 g          254 t
ORIGIN      
        1 aacaaaaaaa ataatgtgct agccttctgt acatggcaag atttcatcca gcagcttgag
       61 aaggtcaatt aagtgttaaa tagcacaggg taagatgact atgtgccatg tcactttttt
      121 acatatcatg agctgtacac aagggcatat ctaaataaaa tgcataggaa atatcatcac
      181 gcaaatatga tccacatttt tttcttgatc aaagaggctg aggggaaaaa taattaaaaa
      241 gtaaaagcct tatgcaatga gatttaaaag aaaactttgg aggctgacaa gatgcatctg
      301 gcacaacttc aaagtccatc aaagtacata taatcaatgt ttgtcaatag cagttttgca
      361 tcctttaatt tatctttcat ggatataaag catgatgtta ttaagatcca gtccatacct
      421 taattctgtt tgagatttga tgaatcaggg ctctattaaa attcagtgca aatcagctta
      481 ctcaaggacg cattacataa agtcgtgcgt tatctaactc cttttatctt gctgtctttc
      541 taactagtta aagaatctgg aatttcttaa acttgtatgt atggccacca acatactaaa
      601 tctcaaacac gttttacttg taggcacctg cttaaattat gcacatgtgc cataattagc
      661 atacctaaat tctttatgta tttttttatt tatgaaatct aatttaggat gttcagtctc
      721 catagtaagg attcatcaga aacaagattc cctgacagac aaatttcaac acttgtcaca
      781 gagtccgtaa tcgg
//
LOCUS       KCKM01002703             959 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42418apa ultra-conserved element locus
            uce-2809, sequence.
ACCESSION   KCKM01002703
VERSION     KCKM01002703.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 959)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 959)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..959
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42418apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>959
                     /note="ultra-conserved element locus uce-2809"
BASE COUNT          284 a          223 c          206 g          246 t
ORIGIN      
        1 tcactgcctc ttattctcgt cagttgtgcc attggccagc ctcagccaaa agcagaccac
       61 aaactgctat caatcctcaa ttttggcttc tgcaagtttc ctgcctgcag ggtgacctcc
      121 tcaaggcagc gacaacaact tgtgaaccca ggccgtcatc cctgatctgg ggagaaaccc
      181 cagcaagcag ttcaaagcca atagggtgct ttccttaatt tcaattaaat cctaaatgcg
      241 ttttcatatt gactaatcac tgaggggctg attcagctcc ctctgcaaac caggacctgt
      301 atcaatagca agagccaaac actccttcct ggaaatctgc agtgcacaat agtaaataca
      361 gagaaccagg actattcatg tattaacaat gcagcggcag cagcccttta ttgtcacaca
      421 cattgttaaa cccacaaaga gcaactagta ggttaaatct attttagctg ggaaagcttg
      481 acaaaaatcc ttgccaccaa gcatttgata ctgatcacag tgtcacatca gggaacagca
      541 agctcaaaag aacgagtcat tttttttatt tctgaacttt agaggcaacg gcctctcctc
      601 ttcgctggct ccccaggtct tagtcctctt agtaggaggt gggctttttt aaaatttttt
      661 ttctttcgtg ccactcaatg agagcaaatt cggggtgggg ggaaggggag ttaaaaaaaa
      721 aagcaggaaa cacaatgcta tattgaggca acacaggtgg atggggattg caagtacaag
      781 tttcctcgag ggaaatcaaa ttcaaacctc ggcatggcag caaagggtgt ggtttgtgag
      841 gcagcaggat ggcttagtgg caaacagtta cggtgttaat cagctgtcct gtcatataga
      901 aacatccaac ctagagcctc tctctgaaat aaataccttg gaattaacac aaatggatc
//
LOCUS       KCKM01002704             999 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42433apa ultra-conserved element locus
            uce-1971, sequence.
ACCESSION   KCKM01002704
VERSION     KCKM01002704.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 999)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 999)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..999
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42433apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>999
                     /note="ultra-conserved element locus uce-1971"
BASE COUNT          288 a          208 c          169 g          334 t
ORIGIN      
        1 agacctgcca cccttctcga acatatgatc tgcatctacc tcctttgtct catgcagtag
       61 caacctattg catcacggat cttcgaaata aaagcttcct tagaaatctg ttcctctaag
      121 agcatagaat tctatgagcc ctgactctac attttattag tcagatttca tggaaaatgt
      181 agcctatttt ggcttaactt tttctcttta gtcccattta aagatgcgct acatataatg
      241 tttatcttcg atcagactta ttcagcagat agtagcagct tttgttttta aatgaccgga
      301 gaattggttt gctatcaagt gcatagttaa gacgcctcat atagctctgt ttttctgtac
      361 ttctctcatt ctctgccaac tggtacctca gtcttattgg tatccaataa taagcccgat
      421 tacagctagc cctaggagac atgacaaaaa gagagtcctc atcttgcatt aattgctcgt
      481 attgaaacta tgccacatct ctcgaagcta gatgttgctt agtatccctt tgatatgata
      541 atgacatgct tcttagcaga tgaatatgca aattaaaagc agtaatttgg tggcatgcac
      601 ctgctgacac tgcactacta tgcttatgtg ctcctctgta acactgcagc tacacaaaag
      661 catcacagag gtaaaattaa attctaatgt cgtatatatt aaacagatgc ttccactttt
      721 ctttgtatat ctacttttta cagaatttgc tattggaatc tcagttctcc cttcatgcaa
      781 ttagtggaca tttatgtgtc atacacagaa atgtacttgg agctatttaa gggctctgtt
      841 tttaaagaaa tggtttacat gaactgctct ctcaaagaga tttttttccc ccttcatagc
      901 agagaggcag aggattttaa tcttgatgca caaaagacct tcattcataa aagaaatgca
      961 tacttgagca tggcagcttg caacagaaaa tttctgtgg
//
LOCUS       KCKM01002705             694 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42449apa ultra-conserved element locus
            uce-7459, sequence.
ACCESSION   KCKM01002705
VERSION     KCKM01002705.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 694)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 694)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..694
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42449apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>694
                     /note="ultra-conserved element locus uce-7459"
BASE COUNT          203 a          126 c          167 g          198 t
ORIGIN      
        1 ttttgcaaag ctttaaaata aaacgaaggg tgctactgaa aggtctgttt gcccagctcc
       61 tctttgcata tgcagtttgc cagccagctt tgtttttcgt ggagccttcc ttggtgtggt
      121 atttcaagtg actgccatgt ctttcctgca tggtggcaat gatgaatgct gaacatgaga
      181 taaattaatg ctggggattt tggtcaatgt cagccctttc ttcactgtgt caagttaaac
      241 aaacaagatc aaggcaaagg aaatggtaat tgtctctctc gagatgagct ggagataaga
      301 gcagcattgt tgaatctaaa tgcagaaaat tttcacaggt tgtgtccagc gttagaaaaa
      361 gggactattt atttgcctaa aatgcagcaa tttggtaact gaaatgcatt tggaggagag
      421 aaaaaaacca caccacacaa taataagcca accgtgggag ggaaggaaga aacgggggct
      481 ttgggagctc atgcttatgc gattggatat aggagaaaat cacagctgtt tttctggcta
      541 tcgcagagtc tccctctcac agccctttgc acctgaaaac ttgtaatcat gggcaggaat
      601 ccacctttta agagccctgt taaagtatga tttgcgtagt agggatacat agtggttagg
      661 aagttgaaac aactcataat tacgtcttct gtgg
//
LOCUS       KCKM01002706             582 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42464apa ultra-conserved element locus
            uce-5063, sequence.
ACCESSION   KCKM01002706
VERSION     KCKM01002706.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 582)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 582)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42464apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>582
                     /note="ultra-conserved element locus uce-5063"
BASE COUNT          129 a          131 c          112 g          210 t
ORIGIN      
        1 ataaatcctt attctgtccg gctttcattt cctttttttt ttgcaatact gcttgcttgc
       61 ttttcctcct gtctcctttt tttttttttt ttgtctttat ctttcttttc tcctgctgcc
      121 ctcccagctt ttcattactg tcatcttttt tcccagccac tgaacccttg atgttgttct
      181 aattgacaga cggggtttaa aagcacattc gaaagcgcct gtctttttaa atagactcct
      241 gtctcatcaa aagatgtaca gcaacattcc attagagcac atcatttgaa aagagatggg
      301 gcttttagca actgcactca tatttttata gttaggctgt tctgctggga tcatccttcc
      361 cccttgccag ccccatcacc tcctcttttg gggagcgcag gaggaaaatg tacattaaag
      421 agagattaat gaacgttttg tttgggtttc tcttctctgc agcgctcagg tgcttgttca
      481 gcctatctct ttctcatagc catggcacag aaagtttggg aatgaaagtg ggggtgcaaa
      541 atgcgtatgt gctgacgtaa atgaagacat ggctgaagaa ga
//
LOCUS       KCKM01002707             856 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42480apa ultra-conserved element locus
            uce-5231, sequence.
ACCESSION   KCKM01002707
VERSION     KCKM01002707.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 856)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 856)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..856
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42480apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>856
                     /note="ultra-conserved element locus uce-5231"
BASE COUNT          218 a          187 c          212 g          239 t
ORIGIN      
        1 acacagaatg agagagagag cagggggaac tgtgcgccgc ttctccggca tcaccaaaaa
       61 aaaaaaaaaa agaaagagaa gaaagcagag cctttgcatt attatgtgtt ccgtccagac
      121 cgcaaatgct gtatttttat atacctcccc atctccctcc agccctgtcc cctcctcctc
      181 cgcccgcgca ggcaaagttc ttgaatcagc agattctgag cttgggagca gtaaagagct
      241 attgagggac ggactctgat agcattacaa ccatacatgg agccattttc tgtggcgaat
      301 cgctgagttc tacctggtta tctcctgcct tgcacatcac ttccgaatga catgctctca
      361 gtctgggcaa aaaaatgaga ggtttttttt taagagctgg gatttcaata atatgtgacg
      421 aaaggatgag attactttct gaggtgggag aaggcaagag agggggagag agggaaagga
      481 gatgaagagc aagttcttgg ttctttctta gcaaggctta tttagtgatg gtaaaagcag
      541 accagttgcc tttctttgga tggcttctta ctctttcccc aggtgaaggg ggctgggaga
      601 agccccatat tgctctacag gtgagtcgtt ctcatgacta tgctggctag ctcagctact
      661 aggtgctacc tgcttttata aatgccacca gccttggcct cctgtgcacc attgtgaaga
      721 attgtgtcat tctcctttgt agttacttat gtgtttgctt gtgttggtcc ttccaggatc
      781 gatttctctg gtagccagtt tcacaggaac atttcacagg accacatttg cagtggttgg
      841 aaagtgtact cagttc
//
LOCUS       KCKM01002708             578 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42494apa ultra-conserved element locus
            uce-6339, sequence.
ACCESSION   KCKM01002708
VERSION     KCKM01002708.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 578)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 578)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42494apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>578
                     /note="ultra-conserved element locus uce-6339"
BASE COUNT          166 a          113 c          105 g          194 t
ORIGIN      
        1 agtaggaaac aagctattat ttctctgtcc cccctcagta atgtgtcttt cttgatcctt
       61 gttcctaaag atcagttgtg caggacatac aggtgttagc acagctggct tgctgatgac
      121 aactctgtcc atatagctgt ctagtgtgtc atcactcata ttgttcagtg tcattctgac
      181 ctagccaagc taaaaatggt actccagctc aagagggatt taaaaacctt gacaaactaa
      241 agataagaca ttgccaaatg tcatatccat gtgcttaact gtttttttca gtttagacac
      301 atctaaataa gtgatttcag ggtgcatttg tctttttttt ttaagggctg aatacttttt
      361 ttactttgcc ttcagtaacg aaacatcctt gtttggagaa ttgtgaaatt actgaataca
      421 ttaactttta ttttctccag acgtaggttc attttcagcc caaggtcact gaaatccatt
      481 cataggggat gtattatagt gcacatcatg caactacagc gaagcttagg tgcaatggtc
      541 aatgtttgca aaagacaact ctggatcaaa ttaacatc
//
LOCUS       KCKM01002709             844 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42510apa ultra-conserved element locus
            uce-2800, sequence.
ACCESSION   KCKM01002709
VERSION     KCKM01002709.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 844)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 844)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..844
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42510apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>844
                     /note="ultra-conserved element locus uce-2800"
BASE COUNT          234 a          167 c          153 g          290 t
ORIGIN      
        1 agtcactgaa gaattttgca gagtatctta tttaattaca gatttcatcc tgcaacagag
       61 aactttcata tagagcaaag ccctctgtag caccttcttt ccctaacgtc tatatactct
      121 cattttcagc tctcgccttc tattcctgcg cgctaatgcc cattaatatc cagcaagtgt
      181 cagttgtatc caaagtttca gtctattaaa tcaatgaaaa atatattgga tttaatatgt
      241 ttggcttagg aaatttgttt tgtctgctgc agcctactgc agcttgctct gagcttacct
      301 ctgtttgaat tagagggtgc cggctcatgt gcagctcaga cgttggccca taagaccgtg
      361 aagcgtagct gatttttgga gaaactacta agtagtttct atagtgataa tgatgtacta
      421 tgtgcaccta ttgggaatat ataaaattag agagaatttc tgtttgcttt ggtcctcttt
      481 ctagaataat tacagtaact gccattcatt cccattctgt taccctgatt attctagaat
      541 aacctggtta ttaaggttta gtcgtgttta agaacatact gcaaagtgac aacttgtcat
      601 gttggtatta tcaatacttt agaatttcca tattagtgac ccaattttct caagattcct
      661 gagtatttaa tttggtgggg agaaggaggg agggaagcaa atgatgcctc ttgctttttt
      721 ctattcaaag tcgccttcat tttccattcc tgaacagaaa gctttccctt atcgactaaa
      781 aaaagagtcg aaacaattac tcttacgacc ttaagcacat tctcaggttg gaaatcctcc
      841 tgct
//
LOCUS       KCKM01002710             938 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42526apa ultra-conserved element locus
            uce-5846, sequence.
ACCESSION   KCKM01002710
VERSION     KCKM01002710.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 938)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 938)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..938
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42526apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>938
                     /note="ultra-conserved element locus uce-5846"
BASE COUNT          289 a          169 c          196 g          284 t
ORIGIN      
        1 tttttttatt gacatttata gtttcacttt ttagaatgct acagttacct ttgtggtata
       61 aaataacctt gtattatgtt tatttctgta aagaaataaa gaggaaaagg tatgctataa
      121 taaatagcag aggtgaagga acactgttac tgtttccatt gcaataccat agctttgcta
      181 atggcagcct gctgtgcaga agaaaaaagg aaggaaagga aacctggtta attagaatac
      241 agttgctgct ttattgcagc attactgcta agtgcactga gatgccttcc cataggcagg
      301 tgccggtggt tgtacagctc atttagcctg ggtgagtaat gtcagttcag gaggagagaa
      361 aggcttgtgt cttcaaactt tcaatctgcc tccattatct gtgatcaagg tggaaccaca
      421 ggggagtgga attactggca ggtctaggac aagtgaagag acagtgaatc tataagacat
      481 attaatcatc tttcccttct cttcgctggc gccagcctgt gcctccgact ccccggcgcc
      541 aggcaaatgg attctctgtc cccacaggta caagcgaatg cctttcaggg gcaagtcatc
      601 agaataataa ttactgacac tgctgagatc agccctaacc agtccaaaaa ggaagagaaa
      661 gtattacggg agaaatatat ttcctgaact ttcatatcag tagttatagc attacgatat
      721 ttttcaatta cattaaggac tttcagatta cagaattcta aatccacgtt cgtcaatatt
      781 gtcataggat catcaccata gaatgaatat ttaaaatctt tacagtttct ctttaaaaca
      841 ttgtttggat cttttgctga ggtgtgaata tagaaaagtg catattgcat cacgagtctt
      901 aaaattcagg tgagattata aagaacgtga ttcttgca
//
LOCUS       KCKM01002711             866 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42540apa ultra-conserved element locus
            uce-7428, sequence.
ACCESSION   KCKM01002711
VERSION     KCKM01002711.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 866)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 866)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..866
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42540apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>866
                     /note="ultra-conserved element locus uce-7428"
BASE COUNT          261 a          157 c          148 g          300 t
ORIGIN      
        1 atttcctcat tggtatcaca ggaacacatc agggttttga tgtgacagag ttaaaattca
       61 cagtgcattc tcagaaagtg taccaggcaa acattttagg gtctggtggt gtcctatgga
      121 gaaagacctg cagaaatcaa caggatagaa tgatgaatgg actggattat attgcagttg
      181 aaaagtagca gaaagctatc taatagatct tctactgttt agtgaacagg actcacatta
      241 ggtaatggca gcagaaaaca ttaaagacaa ttgtatatga tgtagtattt ggtcagattc
      301 attcacagtg tatagtcatt tccaaatggc attttgctgt tctttgttct gtagcagtgt
      361 ctcatatttc taaacatttt taggctctgt gacaccttaa tggtatacaa taacagtatg
      421 cctccctctt agaaaaatgg atactctcat ttttctaaac attgtgcctt tacctttaac
      481 catttccatt taaatgcaaa tttcaatcat gtccacttct ctgtattcca acagaaaccc
      541 agggagaaga ctatacctta aatcctcatt tctccataaa gggagctgtt tccttcaggt
      601 aggtcactct gtgttatcta tcttccttct cattttacac gtcatcattc tggcaagttt
      661 atcttgagga attcacaaag aaaaaatagt ctcctttttg ttggaaaact ctgctgtttt
      721 tacatactaa aagaaaatgg gcatttgtag gtatctttat ttcctgttgt ttttttccaa
      781 cataacctac atggaaattt cctattcaca agtctttgag ttattacagg tatttataac
      841 tgtctaggta ctcaaaagtt tataat
//
LOCUS       KCKM01002712             674 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42556apa ultra-conserved element locus
            uce-1907, sequence.
ACCESSION   KCKM01002712
VERSION     KCKM01002712.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 674)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 674)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42556apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>674
                     /note="ultra-conserved element locus uce-1907"
BASE COUNT          194 a          131 c          140 g          209 t
ORIGIN      
        1 tagaggttgt aaacttcaat gacctttttt ctttctgggt ccttgttttt ccatacttgt
       61 aattaagtgg tgctatatat atgtttaaaa gataaaaaaa ttcctatgac tataaaatca
      121 tcactgtgct caccactaca gcctttaaca gccctgcaac cacagattcg gctgtggcca
      181 acaatacaag aggagtcatt actgtaacta aattagaccg tttgttttct ttccctcaaa
      241 tcgaattgtg taggagctgc tttattgcaa aacagacatt aaaattccag ctagacctca
      301 gagagaaagt aatttctatt ttatcagcac tgtaaagctg tctttatgtt ctgaagcagg
      361 aaatattgca gggatattta tagcttcagc accaaagcca gtttgaatag aaatgttacc
      421 gcggtcggca gagctgtcac attgctcagc ggagcaggga attttagtga atttgtgaat
      481 taccatttca gtcctgacaa gtctttcagc gaggctggtg tgtgtgtgga gctgctttgt
      541 ggtttcagga taatgattaa agacttggat cactttaaca ggagatttaa acggtatctc
      601 ggagataacc ggtttccagc aatgagaccc tctaacgaag accgaggttt ccaaactttg
      661 ctgtgctcca gccg
//
LOCUS       KCKM01002713            1065 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42572apa ultra-conserved element locus
            uce-1412, sequence.
ACCESSION   KCKM01002713
VERSION     KCKM01002713.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1065)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1065)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1065
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42572apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1065
                     /note="ultra-conserved element locus uce-1412"
BASE COUNT          344 a          206 c          203 g          312 t
ORIGIN      
        1 aaaaaagtgg tagacttagc attcatttaa agaagaaagc cagtctttac aattctagtt
       61 ccgtcagaaa aaaaactacc ccctaactgc ccccaagcaa ttattcaaac tcccagctaa
      121 cagattcgat gcagaccttg ggcacagcgt tttcacaaaa gaagaaaaag taaagtaaac
      181 aatgagccga tatattattt gtgctgcaat gtgctgtttg acttgcgtta ctccccagcg
      241 tagagggact cccttgctgg agaaagcgta gcaaagagta aagacagctt tactgacctg
      301 tgtgctgccg ccgatgcttg gtgagggcat gacgtgtccc gccggcaaag ccacaaaggt
      361 cacagaggaa cgacttctcg cctgttgcaa caataaacag atgagggact gcggaggtca
      421 cagatcatta aaacatatct atcaaggctt tcagggttac taattcctcc aatcaaatgt
      481 ttccatgtaa atatgtcaaa tgggaatgaa attaccactg cggtttattg actgtgataa
      541 aatctgaaaa gcaccactga acataattac atacttgtca gacccataaa aattagcttt
      601 attatcaatg gaatggtttt gtacaacttc atttctgtta gatgtcttcc agatggggct
      661 gctttatgca cttgaacagt ttttatgcat atcctgattt tttacaattc ccatacatct
      721 ggcctttctg tgctgagtaa agattgcctg gaaaaaaagt taatatactg cgtatatgat
      781 tctgcttaaa taaaatatat tgaatttact aacaagttaa gggtagtgag aaattttcaa
      841 cagactagat cacagtcatc tttagttacc ttttatttat taataagtat taaattattt
      901 tcttgaatat actgaagagc ccaggcgaca ataaatgcca tataattcag taccagtggc
      961 aattcagcac tgcttatgtt tctgaagttt tcatgacata aagaaaacag gtctggggat
     1021 tgctactgaa attgcaacag aactcgcgct gttcatcttt gaatg
//
LOCUS       KCKM01002714             562 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42587apa ultra-conserved element locus
            uce-381, sequence.
ACCESSION   KCKM01002714
VERSION     KCKM01002714.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 562)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 562)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42587apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>562
                     /note="ultra-conserved element locus uce-381"
BASE COUNT          143 a          121 c          127 g          171 t
ORIGIN      
        1 ccccctcccc cccagcccct aaaacaattc cagacagcga gggtagtgtg ttgcttgggc
       61 taaggctggg ctgttagcta aattaagcca ttgtgactca aaatcctcct ttaataaggt
      121 tcatgctgtc tacaacttca tcattttctg ctgaatgata attactttat tcaatcatgt
      181 tcaaggtttt agtgaaagct agcattgatt gattaacttc aattaccatg cttacatttg
      241 catagataaa aactgctttt caatttgtga gtggcacgct ggtggaaacc ctgcgctgat
      301 atttgcattt caatgtgtat agtgaagaat aaaggtggga gagaggtctg atcagtgcta
      361 agccctttct gcttcagtgc ttaagcattt ttccataaac actcttgtta tgatgttagt
      421 ttgctcaaac cactccgagg gaaccggagc ctcctgttta cgagcgtgtg tgacaattta
      481 acggggtggg gtggaaatca aagcttccag cagggccgag gtgctgcttc gagtcaataa
      541 cccggggaag ttcttcctct gc
//
LOCUS       KCKM01002715            1080 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42603apa ultra-conserved element locus
            uce-5167, sequence.
ACCESSION   KCKM01002715
VERSION     KCKM01002715.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1080)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1080)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1080
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42603apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1080
                     /note="ultra-conserved element locus uce-5167"
BASE COUNT          303 a          276 c          228 g          273 t
ORIGIN      
        1 aggcattaaa agtggatttc gaatggcaga ccgtgattgt tgccctgcta gggcagtata
       61 gccttgatta aacgcagagc agtactaaag taaaaacaaa accctgccat ggtaacctaa
      121 attcaccact gaaccagacc gcgtccacgc agaaagctgg cgtttcaagc tattctaatc
      181 agtgttgaga aaaactcgga ctttctagag ggcatgaagt aaagttaagc ttccccagct
      241 gcacatctgc cattgttttg tcctctgcct tctcctcggc tctttgccca acaagccagg
      301 gacgcagatg tggagatcct tgctccgcac ccacgtcaag ttcaagtacg gaagtttagc
      361 tctttgactc ccacccccca cctccaagtc acttgtcagt aaaaggttgg gcgatttatt
      421 gaccactgct ggatgcatac tgtcagggct gaaggaaata tgagaggggg ctgtcgctac
      481 tgttcgagag ctcattgata atgacatacc tgcctctgtc acccattacc catactacaa
      541 actacttaga cctaactgaa aaatcaatag cctacttgca ctggttcctg tggctgcctc
      601 gtttgattgt cagctcctgt ctagggtcag cacttacatg aaaggggctg tgactgcctg
      661 atgctttcag gacaacctaa cgatatgaaa ctacccaaca gaacagtaaa ttctgtcccc
      721 ctgccctcct catcaattag gctttgacta ggcttgcctg tagaaacctg accttttaag
      781 tttaggtgaa tatggaacta gctgaatacg ccattgccct cagcgctgag ccaggaaatc
      841 cactgacagg ttaaacaaaa cagaaggttg taactgtcat aatttgcatt gcactttcac
      901 gccaacaagg gtgttatcag tgggggcaag ccctggaaca cacaacgcaa gcaccctaag
      961 tcactctcct cataaatttt caagtgaagg gagataaaac ataaattcac aaatgactgt
     1021 gcattcgtag tcccactttc tttcaagttc gcactctgga aagccacaac gtgcgtataa
//
LOCUS       KCKM01002716             946 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42619apa ultra-conserved element locus
            uce-5701, sequence.
ACCESSION   KCKM01002716
VERSION     KCKM01002716.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 946)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 946)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..946
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42619apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>946
                     /note="ultra-conserved element locus uce-5701"
BASE COUNT          262 a          284 c          229 g          171 t
ORIGIN      
        1 gtttcacctg gctccagggg atgaccacga gctcctcctg gcatggaacc cccgggacaa
       61 ccccacctca acagcacctc cctaacaggg cacaatcctc attagggttg agggtgcctc
      121 atgttaccac cctccaagaa aggaagggtg gccatgggga aagagcagct tggctcatcc
      181 caaaccccaa catgaagaca ctgggctctc cagccccact gtctccccga aggtagggga
      241 gcagcggcgt gctgctggga ggggaaaccc aaaagccaca gagactgtgc gtccacaggt
      301 gtttcctaga gttttcggat tccttattcc cctttaaagg aagagatggt attggaaaag
      361 ccccttccat gtcccctctc atgccccgct cccggccacc ctccacagca cccacaccat
      421 cctttcggac atggatcacc cttacctatt gagctgagga gaagcttgtc tcgacaacac
      481 tgcccagata gctgagatta atcaaaaaca aagcagttat caacacccgc aaggagccga
      541 gctccgcaac acatcagcac gtcaacaact ccaaaggagg gaaagaaacc aaaccgaaac
      601 acaaacgaaa cgaggctgga gaagaaaggg ggaaagaaac agaagagaaa ggaaaaaaag
      661 aaacgaaagc aataaccaac gaagcgaatg gatgtataag cacggacaac agtgctgctc
      721 taacacggat ctgtcctgga gctgggtctc cttggagtgc cctggctagg agacacagac
      781 ctacgtctac ttcgctccgt agcgttgttt tccagaggca cacaaaaggc gtttcaggct
      841 cgttctgctc ctctctcacc ccatcctctc ctctgagccc tccttctttt cccctgcgcc
      901 atcctaacgc ttccaggtac cagagggcgg gagtgaaatg cggagg
//
LOCUS       KCKM01002717            1012 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42635apa ultra-conserved element locus
            uce-6424, sequence.
ACCESSION   KCKM01002717
VERSION     KCKM01002717.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1012)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1012)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42635apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1012
                     /note="ultra-conserved element locus uce-6424"
BASE COUNT          346 a          188 c          146 g          332 t
ORIGIN      
        1 aatcttttag cattaacata caacttttta gctgactggc tttacagtat tcacatgtga
       61 tactcaggtc aaatcaaaat ggaataaaac cccaaatgga ttagttatct caatttaaat
      121 ttattttaac tttattgata attttgcact agggagactt gaatcttatg gttaaaatac
      181 acttgaaacc aattaggacc atatgaccgc attctagcat aaagaacaaa agcaattgac
      241 agttccaaga ttaagccaca accactcagt ttaaaacaga aatattttta ccttattttt
      301 taaaggttgt gtatatctta aaaaaaaaag gtgtaatatg gggaacgaca caatgcttct
      361 taaaacacag tgatacccag ggactctcac tctctcttta atgatccact gctctcattc
      421 agctgtcttt cttttttcaa atctttacat atgtgacagc tctcaaaagt agaccataga
      481 ccatctggca ttttcagagg tgtaacttgt gcaaattcag ctctactggg aacacaatgc
      541 tatcttctgc ctgcgttata aaagatacaa tagaatgtag aacttatgag ttgttttgaa
      601 ttattcattt tttgcctgta tattcaagaa attttacaaa ctctgcattt tgtactacat
      661 aatcacatgc gttaaaggta caaagaaact ttttgacacc tcttttctac agaaagatgg
      721 cattttgttt gatatgtgaa cattcagcgc ctgttatatc attctaaaca ggccgtgtgc
      781 tgctacaaaa gatcccattt tacactctat gtatgagcaa aaattttatt cttgatattc
      841 agtaactaat gcaatacaca tcagaatttc aaatatgagt tggatgaaca ttcagcatct
      901 tcaaatcagg atggcactgg tcacttacta tatgttaaag aaaaaataat cattcctcac
      961 acaacacaga aatattgcca tttcagacat ccacaatgaa tagtttccaa tg
//
LOCUS       KCKM01002718             742 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42651apa ultra-conserved element locus
            uce-532, sequence.
ACCESSION   KCKM01002718
VERSION     KCKM01002718.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 742)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 742)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..742
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42651apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>742
                     /note="ultra-conserved element locus uce-532"
BASE COUNT          260 a          134 c          111 g          237 t
ORIGIN      
        1 gagatgtgaa agcatctcaa cacttcatat accggttaca ttacctgcat ctgaaacagg
       61 ttttttcttc tctcccttat taaactatat ttgttttggt tatgtgggag aggccagttc
      121 tagctgtagt tatactctaa catcactgta aagtaatatc atgctgccag gcaatagctc
      181 tttaatgtca accataacct tcacaaatgg gtttgtaacg agaaatcctt gtttgtcatt
      241 cagtaggtat gattgatgct atatgagtga agtgaagcta cagtgaccat ctcaataaca
      301 tgaacagctg ccaaatattc atttagcaga atgagtttaa aaaactttga gcagattgct
      361 ttcacaaggc tgctttcaac aaaaggaaac ataattaacg agctaatatc agcatgtgtc
      421 tggctaagct aatgaatatc aaattacaca gaaacctgta taaatcatca ttatcctgaa
      481 ttttaattga acttgcaatt aaacatgaca aattttatat acactaaacc tttaatttat
      541 actttcaaat aagacataat ttatcatttt tagtatttca tagttaattt cccaatatgt
      601 acacttctaa ttaacaagat agacaggcat ttaaaaaaaa tagaaaacaa actgctgaat
      661 agctccattg gttacaccaa ctttcagtag gttaaaatca ggggccaaaa acttagagta
      721 ctgcaacaat ccacttcttc tg
//
LOCUS       KCKM01002719             681 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42666apa ultra-conserved element locus
            uce-157, sequence.
ACCESSION   KCKM01002719
VERSION     KCKM01002719.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 681)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 681)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42666apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>681
                     /note="ultra-conserved element locus uce-157"
BASE COUNT          163 a          218 c          160 g          140 t
ORIGIN      
        1 tagaagacat gtttttgctt tcctcccctc ccccttcccc tttgaggaat ggaaagaatt
       61 tcctattcaa acagacaaaa aacccagcag ataacagtta tgttgcgttc tcacccgtaa
      121 atgcgcctct gcctacagca ggaagaaaag ccaccaggaa tttccacaca cattttctgg
      181 cccgatccag tgcactccac tggatgcatg ttctataggt gcctcatggg aggctcagca
      241 gcggggctgc ggctccggga cggggccggg gtcgggatcc ctcgctaaaa tgcccccgta
      301 aggcctccgg gctgtaacaa atagccaaga gccgagaaaa cagcaacaag ctcaagatgg
      361 cgatgcagcc cggctcccgc cgcagcagcc agtaataagg aaggttattc aatcccatta
      421 gccttttagc ccaaagaacc cctcctcctc ccactcattc aggctctcac ttacccttcc
      481 tcttggcctc ttcgctgaag acatttttgg cgtcagacaa aggctcgccc tctgcttttt
      541 cagcacccca ggcagtgctc aagagaaaag catcgacagg agattgctaa atggcctatt
      601 tagcgagccg cggccgaggg atgcgcggcg ctccgcgaac acgcgtcccg accccgcagc
      661 atcttcctca cccgcggagc c
//
LOCUS       KCKM01002720             610 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42682apa ultra-conserved element locus
            uce-5692, sequence.
ACCESSION   KCKM01002720
VERSION     KCKM01002720.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 610)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 610)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..610
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42682apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>610
                     /note="ultra-conserved element locus uce-5692"
BASE COUNT          158 a          114 c          138 g          200 t
ORIGIN      
        1 gttgttgtgc tcagcattat tgtgtttatg gtcaactcaa aaaagcaaaa tatggcctta
       61 attttgaatt ttgccttttt tttttctttt cagtggctgc atcaactgct aattccacag
      121 ctggtgcggc catgaattct ttgacttctc tgggtaccct ccaaggactg gctggagcca
      181 ctgttggact gaataatatt aatgcactag caggtaccgt aaacagtgag tatttattgc
      241 tgtggtggac agccttcccc agtaatcatg ccacaaaaac tatcagttgt aaagtgatga
      301 tattattatt tttgatctct gtacaaaata agggggtcaa gttgatctag ttccatttgt
      361 ggtacatacg cagttctgga gtcttttagt ttcacatagt ttgctctgca aagtgaagtc
      421 ccttgggtcc ctgcgcaaag actccttttc ttgcagggtg tgcggaaggt aaaagaaatg
      481 tcaccaggga tttgggttgt ctaagttgta ggagaggctc ctttttcatt tagggagtct
      541 gacaacaggt atgtcactcc agtatacaaa acctcactca gaaatgtagt gataagaaag
      601 gtgtttgcca
//
LOCUS       KCKM01002721             703 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42698apa ultra-conserved element locus
            uce-5397, sequence.
ACCESSION   KCKM01002721
VERSION     KCKM01002721.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 703)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 703)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..703
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42698apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>703
                     /note="ultra-conserved element locus uce-5397"
BASE COUNT          197 a          170 c          155 g          181 t
ORIGIN      
        1 tgtgtgatgc agccagctta accctaactg gaaaaattta cccttaaatg aagaaaaagg
       61 taaatacctc cctgttctaa tctagattat ggaaaacatg gcacacctcc aaaccagacc
      121 aaccttggag aggctacctt gtcatatggt ctgtctatag aagacaaaca tacctgctat
      181 ttccttcctt cttgcacaaa cactcaagac aattctatcc tgggagaaat cccttccatc
      241 ctcttcttca accacctaaa tgtcaacttc tgctaagaca aggtccacac tgggttccag
      301 ccagccctac gtgctgtccc acctactggg gataacacaa gagctgctcc caaaccagga
      361 cctggcatgg caggggttaa gggggggtga tggggagggt gagaggaaag aaaatagccc
      421 gacactcttc ccagcttgtt tgatggagat gcgacctggc agcattgaaa agcttcaaga
      481 ttaatggaga aaagacggaa tctgacagct tttccgctgg tttcactcct cctgggtggg
      541 ccgattgctc ttgaatgtca cttgctactt agtcttgtgt atctgaaaca gactgacgtg
      601 tttggggagc cccgcttgct ctgtatagac atcaattggg aaggcagata aaaggaaact
      661 gcattgaatt actctcttat gccttttata aagcactttc tga
//
LOCUS       KCKM01002722             913 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42712apa ultra-conserved element locus
            uce-4325, sequence.
ACCESSION   KCKM01002722
VERSION     KCKM01002722.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 913)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 913)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..913
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42712apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>913
                     /note="ultra-conserved element locus uce-4325"
BASE COUNT          289 a          182 c          153 g          289 t
ORIGIN      
        1 tatattcctc taattaaaga acgagacttg caagttaact aaatggaact cgtatatata
       61 aatatgcccc gaaatattta gaatttgcat cactccaaaa tggcattcta ctgtaacagt
      121 ctgacaataa agtttcccaa gttgacaatt atttgcattc ataactggac gtttacttaa
      181 atttccaggg aaaacagttt cttcatttca gaagttacgt gttctttaag aaagaaaaaa
      241 gggggggaaa acacaacaaa agggagaaaa atgagaccat acttagcagt acagttagat
      301 taggtctcaa aaatctgaga acatttgagc atgcctattc ccctgttccc ttcaagtttt
      361 atgctatgaa atattttctg ataacaggcc tcatttcggc ctcagctcca caccagtaag
      421 gttttaatac tcggcgtgtg atgagagatg aaaccaagtg tgaacaactt tcgggtccca
      481 tgagtaggct gactgttgaa gctgtcaggt tcaattgcat cattccccat tattcaatgc
      541 cccaaactgc tccctaattg ttcagggctt aacatattca aaaccattgt ttccactaat
      601 gctgaaatgc ctacagttga gcttccataa agaaagggga gggatttaat tgtagttaaa
      661 ccattactga actctcttca tttcatgata ggacaaggat ggccggaaca accaattcca
      721 agacaggttc ttaatcagtt tatatccaat caactccctt ttcccctctg ctttaaaaat
      781 agccattgct atattgtagc tttgcattat attatgattc tgtttcacaa ttagggacag
      841 atcacctaat tacctactta agccagtatc tatttgtcac attaatttca aaggttattt
      901 ttatttcttg ttt
//
LOCUS       KCKM01002723             886 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42727apa ultra-conserved element locus
            uce-1925, sequence.
ACCESSION   KCKM01002723
VERSION     KCKM01002723.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 886)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 886)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..886
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42727apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>886
                     /note="ultra-conserved element locus uce-1925"
BASE COUNT          225 a          209 c          192 g          260 t
ORIGIN      
        1 aatcaagacc agttgcaaga ccagcctctc ctaataattg aattagcctt tgaacaagct
       61 ggatgctcgc agcaaagcag actcactctc ataccctccc actttccgcc tatttggatc
      121 tgctgtctgg atggggttct ataatggtca gttcttggaa accaatttca gtaaatgatc
      181 caaacagtaa tgaagaggct tctgtggaga gtctctcaca atagttcccg gtagctcata
      241 tatatggatt cccccagccc atgaatatag atctataaga agccccattt aatggtgagt
      301 gtgggctttt tctttttgtc tggaatttac caaagtttta tcccagctcc ctggagtcct
      361 ccccaagtct atcgaaaatg cagttagagc agaggctgtc ttttgcttca cagagcgtct
      421 gccttatgct ttcatcagag tagtctaact cacacagatg cactatttaa caatgccatc
      481 ccctgctttc atcagaaggg ggaaggttgc agagctgagc cctgaagaat aaggggggca
      541 ggtcccctgt gatcggcgaa agctgaacat cggtgccagt ttccatctgt catgatagcc
      601 tatctccgaa ccttcaatct gtcaaaagct tgctgcctag ctgaaggctc caggagattt
      661 ggtgcactaa acacatttga caacagcatt atcactgcaa ggagcccagc aaaatgccat
      721 caatgtgtta attgtagctg gctatgtaaa atgtcacttc ccatatcatt ttacagcggc
      781 tttgcctatt ttgcagctcc taattttcca ccctttataa atacgtgggc cgttcatgtg
      841 gaaatgtggt gctttttgtg tgtctgtgtg tcagctatgg tttggg
//
LOCUS       KCKM01002724             857 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42742apa ultra-conserved element locus
            uce-6723, sequence.
ACCESSION   KCKM01002724
VERSION     KCKM01002724.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 857)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 857)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..857
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42742apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>857
                     /note="ultra-conserved element locus uce-6723"
BASE COUNT          245 a          186 c          179 g          247 t
ORIGIN      
        1 tttatcggtg gtgtgtgaca cgcagaggcg gcagagcagg cgtcccagcc atgcgtgggt
       61 tggccaaggc ctgcgaggag cggctgccca tccccagcga gagggggctg ctgctccagc
      121 ccgccgcctc tctgcttttc caaggcgctc gattccctgg cagccggcaa cacgaataaa
      181 ttacaaaccc gcatttaatg ttagtgactc tttaaatgga atttttcatt caaactttgt
      241 cattaaaata gaaaggcctt ttggttgtga ccatacaagc ataataaatt gtatatgttt
      301 gtgatactga atgaatcttg cccatatgct gcactgcaag gctacatgaa tgaagcattt
      361 accaaatcag gcccaccaca ttaaacagaa aaacaatctt tattcatggt aacttatcag
      421 tttcaattaa tcaacctcaa caatagaaat tctgatgtgt tcaagcaact tgaaagcaat
      481 aggtcatctc cagggcagcc atgttgtgtc tttgtgccta tggtttcaaa caaagcaaca
      541 tctccaataa atgtacatcc ccacacacag atgtgtgcct atatgtgtat aaacatctag
      601 gcacaccgag ggacatggtg tatgctaagg ttgtacgtag aagtgtttat ctttttgtca
      661 tacaaaaagt aattgttttc tagtattttt tgagctctgc aagtttaaac aaaagaaaag
      721 aaatttccat tggatgacca tcctttcagt ttctctgctg ctatgtgaat agcattgtgc
      781 aaaccattcc aatggtattg aaaaggggta accattggtt tgatttggtt acacggtttc
      841 gtaaagagct ccctccc
//
LOCUS       KCKM01002725             562 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42758apa ultra-conserved element locus
            uce-99, sequence.
ACCESSION   KCKM01002725
VERSION     KCKM01002725.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 562)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 562)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42758apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>562
                     /note="ultra-conserved element locus uce-99"
BASE COUNT          207 a          108 c           65 g          182 t
ORIGIN      
        1 gcagcaaaaa tatagtaatt acaagaattt cattttcatt aactaataaa ccaaggaaaa
       61 caatttaagt atctgaatgt catttttcaa atgaaaataa actgtaaaca tttgaataac
      121 atcacagcag ggataatata cctaaggaaa cctattgaaa tatgctggcg aattcatcct
      181 cttttatcac attaaaactg caattgactg taaacctcct accactctcc gctgagactt
      241 taattgtaaa gattcctgtt acatatcata ttagaattta gttaaaattg tagaacacat
      301 tatttccaat cagacagcca accatcactc acaaagattt ttaaaaaggt gattaataat
      361 tcatctcaga taaggaaaag atctatattt ataccatctt ctcagccacc ataaactacc
      421 tgacaattgt tcagtaatga tgcccagtaa attctttaaa atggtaattt gtcattctgt
      481 cacttcattt gtgacctaaa attcctcact tgaggcatca tcaaataaat taatcacttt
      541 ccaggatcca tttctctgtt ct
//
LOCUS       KCKM01002726            1086 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42772apa ultra-conserved element locus
            uce-2911, sequence.
ACCESSION   KCKM01002726
VERSION     KCKM01002726.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1086)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1086)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1086
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42772apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1086
                     /note="ultra-conserved element locus uce-2911"
BASE COUNT          263 a          274 c          262 g          287 t
ORIGIN      
        1 aggcagcact gcagactgag aagccggctt ataccccagt ggaaggaata agcaaggaca
       61 taatgaccag tgggtctgca tataacaaag ggtatctgaa ctggactgaa ctgagtactc
      121 accagagtca cctatccctc tgccactgct acttgcttaa ggatgctcct gaaatggctt
      181 ttgactccaa ctttctgctt tttcttgtat atacaggctg ccccttggct ctgctggggg
      241 attgagaggt acctccctcc aagagttggc cctgtgcaga aaactacact gaattaaaca
      301 tcaggcggac agccctgctg agctctgcac agctgtgagg atccttcaga ccaatgtctt
      361 ctataaagac ctgttactga agcttctgtt tcatggcact ttctagaggg ctcttgttaa
      421 aagattacct aggcagttga ttgagtgtaa aacatgctgt acctgcaatg ttctcctgct
      481 tggggcaaat tccttttgta ggcgtgagaa gacggtcttc ttcatcgggt gtgacttgga
      541 tcccgatttc cactggctct gacactttcc tgagctcggc gcgtgaggag gggggaggac
      601 tgctcttatc catgctcttt tcatagcagg caccaccagt gccattgcac tgttttctct
      661 tgtgctctat aaaaaccaag atgtctccca gcgggaagtt catctgacac tgtccacagg
      721 ttaacaagtc ggggtctgtc ccgcctgcag cgatgctgat gccacccggc tctgctattg
      781 ccaggctctc atcctcgtcg gcgagtgccg gttccacatg gtcagcctct gctttacatg
      841 gacaaggaga aagagggagg aaagggacaa gaggagaaga gaaagaaatt gctttgaatg
      901 ttcacagact ctgaaggatg catcatgaga ggcccagcct tcccccgcct cccaaagaag
      961 ccaagcctga ttagatcttg cttttatttt tcagcttttc ctctctccca gaatgatttc
     1021 aatatatttt gcaaccaagc ctgcctgaaa caaaatggaa aggctgacct ggcatagctt
     1081 tcctga
//
LOCUS       KCKM01002727             709 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42788apa ultra-conserved element locus
            uce-5554, sequence.
ACCESSION   KCKM01002727
VERSION     KCKM01002727.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 709)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 709)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42788apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>709
                     /note="ultra-conserved element locus uce-5554"
BASE COUNT          227 a          168 c          127 g          187 t
ORIGIN      
        1 tgtggacagc taatctgtat gcttatcaca gcaaatcctg atgctctgta tttttttaac
       61 actttgcatc ccaaaacaac tcataaaaca tctaatgtgt taaacttact gctgccatct
      121 aagaagcaaa tgcgatcctg caaatttact gaaaacttta tgaaagcgcg taattcacta
      181 attcttattt ataagcagaa gcacgggaaa gtcccttgcg gcagtaaaac aaacaaaaaa
      241 ggcctcatta aatatacgaa aacgttttgc ttggaaggac tcaaaagggt tattttccct
      301 atggcctctc aataaaataa ccctatctgc ccccttcaag gttgccctcc ccctattctg
      361 agtcaagcga cctccgacct cttggagggc aaagacatga ctgatccatt cttggtaaac
      421 tgcgaaactc attcccttcc cccaaacagg catgactgct acgacatgtc aacaaatcct
      481 tacggaggga acgaaacaaa gcaaagccag cggctcatta aaactctcga ggagagccaa
      541 cggtacaaat tgccgatcgg taaatattca caaggttatt aaaagctgcg caagttctct
      601 aacgggatct ttttcacgcg aagttgtatg taatgcaatt tcatgaatta tgcaaataaa
      661 gggtttaaac tattcacggc aaaacccagg gctgtgttac tctccttgc
//
LOCUS       KCKM01002728             704 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42804apa ultra-conserved element locus
            uce-268, sequence.
ACCESSION   KCKM01002728
VERSION     KCKM01002728.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 704)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 704)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..704
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42804apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>704
                     /note="ultra-conserved element locus uce-268"
BASE COUNT          216 a          152 c          159 g          177 t
ORIGIN      
        1 aaaaaaaaaa aggcagcgcc aaaacggtat gacaactgcg agggtgtgct gcctcttccc
       61 acattcctgg cgagacagat ggtgttacat gggacacagg gaggtttgtt caaacagcag
      121 caaccttcaa agatcaagca gagcccagcc cgccgcgcgc cattgaggga cccgcgctca
      181 tatgttgctg agttgcataa acaaacagca acagctgttt tgtctccccc catcgccctc
      241 cgaggactac tataaacttt agttgtgcca ctgttaatat gatacaatca ttttaattta
      301 ctaattgtaa atgccacgag caaatgaggg gacttttcaa caccaaagct accattcata
      361 atgcgccagt gccggcgcgc tctcgcatgt gaaatttcaa ggaggttaca ttggataaat
      421 atctaggtgg gttgggttgg tttttccttt tctttccccc cggtgttttt aatgacacga
      481 agcaaaagga agaaccttgt ggtgtatcgg gttaggaaaa atacacacgt gaaaacgtgt
      541 ttgtctgctg gaaaagccac aggggaagaa caggtgaaac cagaataatt tatatcgatt
      601 taagatcaag caaaagatac ggttctctta aaaatactaa ttgcaaaaat catgcgatta
      661 gaagacgtgt gcttgcctaa ctgaatttac cttacactga ggaa
//
LOCUS       KCKM01002729             672 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42819apa ultra-conserved element locus
            uce-110, sequence.
ACCESSION   KCKM01002729
VERSION     KCKM01002729.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 672)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 672)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42819apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>672
                     /note="ultra-conserved element locus uce-110"
BASE COUNT          278 a          119 c           92 g          183 t
ORIGIN      
        1 agagctacac acagagaaat gctttcaaaa cacgagcatt taattttttt aaaatgttaa
       61 gtgagatgta aatatgtacg ttagcaacaa agtgctcata ctgaaaacat attccataca
      121 cagttagcaa tagaagtctg tacaaaagta ataaagttac acattataaa aaatactccg
      181 taactataat ttaaaagagg gaaaaaagac aagggaattg atttctcagt tcatataatt
      241 tattgcagtt agcacacagt ttaaaaattc accaacacac caatagtaca aaactaaaca
      301 gcattataag ttattccccc ctcaggaaaa taaaacatac tatgattgtc aaagctagat
      361 gtcagtctaa gttttagaac aaaagaagaa tgtgaaacta aggaaaggaa aaaagcaatc
      421 actcacgagg accacaaaaa aatccaagag aaagtccatt ttcctcagac actgattgtc
      481 ttctctaact taagaaaaga atgtagtttt aaaacctaga aactattcaa gtaactaaag
      541 ataacgctcc aaggccattt tcacagcttt tttttttttg ttttaaatgc cattacagcc
      601 aaattaacac acatttgacc aaatatttcc aaaacagtcc agcaatacac aatggagttt
      661 tccattcagt at
//
LOCUS       KCKM01002730             844 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42835apa ultra-conserved element locus
            uce-690, sequence.
ACCESSION   KCKM01002730
VERSION     KCKM01002730.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 844)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 844)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..844
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42835apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>844
                     /note="ultra-conserved element locus uce-690"
BASE COUNT          272 a          145 c          161 g          266 t
ORIGIN      
        1 gtaccactaa caaagtacgt cacctttgtg ttaagtttat ttagtcatta ccttcgttat
       61 gtcctcagga atccaatgta catggaagca tcacacagga acaaatgagt aacagagaca
      121 taggttacac attcaaagca agataatttg cagaagctgt catttgactt gaataaataa
      181 atgaagtgac tgtgaggaga tatgatagac ttttagtggc tgatatttac tataattcag
      241 tattaattca gattctcttt agtttaagca atacttagcc atagccatgc cacatacaga
      301 atcttatttt attttatttt tactactgtc ctctttagga cacggaaaaa tacttctgtt
      361 gaggtctttg agattctttc tcactggggc tttaaaattc taaagaacag ataagagcaa
      421 acagcaaata actggattta gaataaactc agaaattatc gctaaggccc ttcctctgcc
      481 acaatttgtc aaatctgctg ataggaaaca aattctattc ataaagattt tatttttggg
      541 ggccctcttg tgatttggta gcaattcaat tatagttttc tgagatagtg agcccggaga
      601 gggaatccag actgacaaga aatatgacag gacagttaca gagtgtttat gcaattaaac
      661 tttcactgac aatacctgcg gaatgatgaa tgcgtgggcg gaggtatgtg tgcacaagca
      721 atgccccaca agtattgcac atttttcatt attatacaac tgttcagatc tttcaagaat
      781 agcctgaagt gaggtggaaa agagagtgct gttccacagc atgttaacca aatgcttttt
      841 tttt
//
LOCUS       KCKM01002731             382 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42851apa ultra-conserved element locus
            uce-6987, sequence.
ACCESSION   KCKM01002731
VERSION     KCKM01002731.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 382)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 382)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42851apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>382
                     /note="ultra-conserved element locus uce-6987"
BASE COUNT          117 a           72 c           84 g          109 t
ORIGIN      
        1 tctttataaa gctttaccaa tttagccggc tttctactct tattggtgct taagaggtta
       61 agactttatt tgtgaaaaca gagagagata gcggggaatc atgttgtctg cagcttcgta
      121 agtcttgctt aagatccttt tcaattacca tccatttctc ctttaaaaag ggacaaaaaa
      181 atagaggagt ggaaacaggt cagggcagtc tgtgacaatg acagtgtgat gggcttggac
      241 cccctgtggt gtttccatct gctatcatta aggtgactat tcagacatga aaaaatccct
      301 cttgctgtgc tgacaggcag acatcaagaa ctatgacaag gcattaagac acaaagtaga
      361 gacagagatg tcatattcca ca
//
LOCUS       KCKM01002732             493 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42866apa ultra-conserved element locus
            uce-7533, sequence.
ACCESSION   KCKM01002732
VERSION     KCKM01002732.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 493)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 493)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42866apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>493
                     /note="ultra-conserved element locus uce-7533"
BASE COUNT          134 a           71 c          105 g          183 t
ORIGIN      
        1 ggttgaatga attcaaacac tttaggaatt ttaaatttga gttgatcctt tttggttaat
       61 ttctagtttt cttgagtggg gggtagggga gcttgaatgc aacgtgactt taaatgatct
      121 ctgattggtg ttttaaggat tgtgtgtata gatggcacac agctcactac attacaggat
      181 atgatctcga tgtagtgcat ataaaaccgc agattgattt tccttgagtg ctttatactg
      241 tttaattaca tctccatgta gggctgaaaa aaattaccta tgtttatata taaactgtgt
      301 tgcttttgat gttgtgttat tgcgcactga accgtgcgca atgaagtttt tgcatatggt
      361 ccaggtaaag cacgatagcc ttgcaagtta agtactgctt cagttcattg tttacgctgg
      421 aattttttct ccccatggaa tgtaagtaaa acgtagtgtt tgtcaccaat aaatggtaat
      481 actaaatttt ttt
//
LOCUS       KCKM01002733            1136 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42880apa ultra-conserved element locus
            uce-1832, sequence.
ACCESSION   KCKM01002733
VERSION     KCKM01002733.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1136)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1136)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1136
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42880apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1136
                     /note="ultra-conserved element locus uce-1832"
BASE COUNT          369 a          239 c          196 g          332 t
ORIGIN      
        1 cctgcaaacc ttttggaact aaaatatgat gcagagatat acattgcaat taacacctaa
       61 ggtgaaaaat taaagaaatt tctgaaaaca aaggaatttt ctcaaatgca tggagaagca
      121 gcaaatcaga gttagtgctt cagccattga aaaggttaac tccacagatc aaatggattt
      181 tcagggcatc ctttgcacat tcaggccttt atattgggaa gcttgtcaaa taaaggcact
      241 cagaaaggaa aggaagtagt catgtcaaat catacatgca agcgcaagag gttgaaatac
      301 tattgccatg cgtaaacagt aaatccatct gcattttagt agccctctat ctaaaccttg
      361 ctccctctgg aaaaactgtg ctcagcagta ttatagcaca cacactttgt ttgtgcttat
      421 taaataaaaa gaagggatca ccttcaacca tattaatgat ggactggtgg atgaaggatg
      481 tctgagaaaa ttcacaacat ctgtttgctc cactctcttc tcagcgtgct gcacctattc
      541 ctcatgctta atgatgctca tccactctgc aagttttacg aacaaatgtg tgtttagcca
      601 cattcatcat tctgaatgag cgttcttgat gaagcatcca ctggcctgtt tcgctctttc
      661 tgctacactt taacaaacga caactgctct acgtattttt catttgttaa aaataaaaag
      721 ctaagtgaag aataggccca gcaaattttt attttactcc tctggtaact ttactagaaa
      781 atggcatact acgtgccttt aaactgtata gaagttcaca cagacaaatc taaacggcac
      841 atacataggt aggtattttc atatcattac acagtagaat acagtgtttc aacagcatat
      901 cagacaaaca gtctatccta tacaaacaca agcagttcaa tcttctcttg aaagtgacta
      961 ctatgtctca ctacgatcag ctaagggact gattccgtga tgtacacaat gccttgacac
     1021 gagacacttg gcatcttttg gtactgggcc agcaatacat cagtggagac ctgccttcca
     1081 tttttcagct ttcctccttt aaagcagacc aatatttaaa ggaaaatata tgtttc
//
LOCUS       KCKM01002734             487 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42895apa ultra-conserved element locus
            uce-5334, sequence.
ACCESSION   KCKM01002734
VERSION     KCKM01002734.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 487)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 487)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42895apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>487
                     /note="ultra-conserved element locus uce-5334"
BASE COUNT          164 a           84 c           85 g          154 t
ORIGIN      
        1 gaagagtgag gtaacccaag ctgtattttt gttttatttt gtcaataaaa cctagctctt
       61 aaaaatttca accacatctt tctaaggtaa catttacctc ctcacatctt tagcatctat
      121 cagacatgac atgggacata ttcattgacc ctaaaaattt tcatcagttt catgcactgg
      181 aagggggcag ccccagctag acaagaggct catttcaatt ttaacggctg taattaaagg
      241 ttaattcact gagtcaggat taacgaggaa agtacaaatg ataggcaagc agctgccttt
      301 ataatacagg attagaacaa tgcaattaca ataagaatta gaaaaaatca acttcctgaa
      361 aaggttttgt aatgaatgaa ctgcatttct ctgttcttaa ttgtggtact taaatgtgaa
      421 gactctgtgc agcatttttt tgttgttgta ataacacttg atcaacagca tgtctaataa
      481 gatagta
//
LOCUS       KCKM01002735             350 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42909apa ultra-conserved element locus
            uce-6390, sequence.
ACCESSION   KCKM01002735
VERSION     KCKM01002735.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 350)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 350)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42909apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>350
                     /note="ultra-conserved element locus uce-6390"
BASE COUNT          107 a           60 c           78 g          105 t
ORIGIN      
        1 actagaaggc gacggcttga aaacgtggtt ttaattgtgt atacatattt ttattaatta
       61 aaatgaataa ccaataaaat cctgctctgt ggtgtcccag cctcataaca cattaataaa
      121 gtttcttaaa ggttttggca gggggccaac acagtccatt aactccttgc aagttgtaaa
      181 aagaagtaaa gtcatttcag gcggctttgt ggttatgaat gaaacagcag gcagtctgta
      241 tggaaacgtc actttggata tggcattggt aatggctgct ttgctgctca atcaaagcag
      301 tatggggata agttaatgca ctgattcaca atctgagtcc tgatgcactg
//
LOCUS       KCKM01002736             583 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42923apa ultra-conserved element locus
            uce-2096, sequence.
ACCESSION   KCKM01002736
VERSION     KCKM01002736.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 583)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 583)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..583
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42923apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>583
                     /note="ultra-conserved element locus uce-2096"
BASE COUNT          160 a          108 c          120 g          195 t
ORIGIN      
        1 gacctgaaca acctacctgg tgaagtggtg agtcttacag ccatttcgtt ctttctttcg
       61 catacagatg cttgaattac tagtagttat ttttgcctgg ctttgctaac tgctacaaaa
      121 ggagtaaggg ggtgaagagc accaagtgta gacccccgta tgagattttt acctttttga
      181 cagttaagga gatgttgaat ggaacatcgt attccttatt gtagaagtag gatcataatt
      241 ataaagctag ccgtgttcat taggcatagc tgctttaaac gcgagagcct cttcatctca
      301 tcttaatcat tatattacaa agtaggcatt tctgtctgcc tagtggcatg tcttgcaaaa
      361 gaacgagaga gtttttgaag gcaaaaagaa gaagggggcc aattatcggc ttctgcttcc
      421 ctgccacctg ccagcgcttt ccttttaatt aatgatctga tgacactggt caatataata
      481 agaaatgctt gtacagtcgg ggtcagaaga ttcaggcttt gatcttcttc aactttctga
      541 aacatttatt tgttttctct aaattatttc agttttattt taa
//
LOCUS       KCKM01002737             913 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42938apa ultra-conserved element locus
            uce-7010, sequence.
ACCESSION   KCKM01002737
VERSION     KCKM01002737.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 913)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 913)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..913
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42938apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>913
                     /note="ultra-conserved element locus uce-7010"
BASE COUNT          305 a          168 c          155 g          285 t
ORIGIN      
        1 tgcatattta tgcatacaca tctaaaaacc ttgctagtgt aatttaacaa ttcatttcaa
       61 aagcagaaag agaaaggaaa aacagaaacc caattgtgat taattatgct cattatcaat
      121 ccagacttat gacctgtgta aattttagga gatttttttt ttaagcgtgt gtgtggtggt
      181 ggatagaagg aagggtgcat atgtctggag tgagagatga aaaatatgct ccttcctctg
      241 ccagtaaaat gacccttcca ccccctcagt tttcaacctt ccctccacaa gttaggtaga
      301 tgtctaaagc cagctaaagc cttattattt agttaactct aggtggtttc cattagcctt
      361 acagtacatg ccactgagca cacatacagt aactgaattg tttcaactta tccaaataac
      421 attgaaacag acttaattgt tgaaccacag gaaagaccat gtgtctccag agactattag
      481 tgtcatttaa aaggctaaat gtatcataaa acctgtcttt aacagaataa aattgtacag
      541 accaacacaa tttcagctaa tgttttccac atttcttgta aaaaaagtca tggactgtaa
      601 aacaaagttc ataatatttc taggagtttt tcagtgcagc gcttcccaac aagtttgaac
      661 ctactatcct ttttgctact gagtagcaac ttactttgag aatagtcaca ttgaaatcta
      721 ctggatatac tctcagaata tatttctgtt tattgtgagt aaacagaggt tttaacacag
      781 cagcagattc aaaaagactg atttcaatag ataaacattt tcctcttaga ctgcctcacc
      841 atttaaatcc agctttgatt atggtactat ttgagagaaa cagtaaaact gaaggagttc
      901 aggttgtcgg tga
//
LOCUS       KCKM01002738             412 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42953apa ultra-conserved element locus
            uce-2400, sequence.
ACCESSION   KCKM01002738
VERSION     KCKM01002738.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 412)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 412)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42953apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>412
                     /note="ultra-conserved element locus uce-2400"
BASE COUNT           93 a           84 c           75 g          160 t
ORIGIN      
        1 ttgtactacg atacaatttt tcaaggctgt gcataattgt gttccctgtg ccactgctct
       61 gtgttctgtc cttgtcatat tgtcattgaa ggctgattcc accctctgta attggagatg
      121 ttctactttt ggacaaaggt gtgggggcag ctcaggggaa cagcgctgac atttacttca
      181 tcaatttatt tttattgttc ctacatttat tgcagctata acagcccttt aatagttata
      241 tctcctccct gtagggtatt ctggtatttg aaattttttt aactcatttg ttctcataga
      301 taacagtaaa gtgcatttca tgctaacctt taggtttcaa tcttctctct ttctttggct
      361 ctgaagcagt tgcagcttta aacttttact gcattgtcag tctaaaggcc ac
//
LOCUS       KCKM01002739             812 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42967apa ultra-conserved element locus
            uce-5555, sequence.
ACCESSION   KCKM01002739
VERSION     KCKM01002739.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 812)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 812)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..812
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42967apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>812
                     /note="ultra-conserved element locus uce-5555"
BASE COUNT          285 a          136 c          147 g          244 t
ORIGIN      
        1 aaatgaagct tctgcaagtt ccacaagaag ctattagatt cccctagcaa tgatttttga
       61 cattcaagat acttgctatg gatgcagaaa aataaaacag ggttgtagct cttcctattg
      121 gtaataaact attccataaa taaacattta ctctgtttcc ttcttaggaa aattaccttt
      181 actgcttgga tagattttcc aatatatagg tcaatctgtt ctaacctttt ctgaaggaaa
      241 atgagaaatg ttccttatga acaagataag acatattgta tctaatagta ctgtttgcaa
      301 acaccaaaca gcagcagact caagaactgc aatataaagc tatcaattaa ttttgttgta
      361 actgtatgca cctgtgaaca actgcttaat taaagaggca aacagaaatc tctcacaata
      421 atgcttcaaa ttacttgcat ttatgtgact caattagttg gagtggataa atacaattgg
      481 aaagctgcca tgtggacttc tggaaataaa gaaaagatag gactgaagag atacaaaacc
      541 aaatgggagg actcagtcag ataaatacag ataattctca gaggttcgta ggcctataca
      601 aacagagaag ataaagaaaa aagactcagt gtaaatatat acaaatacct catttactgt
      661 cacagagttc tgctttcaca gacaggaaca ttaagggggt tgtttgtttt gggcagcata
      721 ctcatagagt tcaggtttgc tttaattttg ctatcacata gattccacaa attccctttg
      781 tctttaggga gtggcagagg tgtttactgt ca
//
LOCUS       KCKM01002740             881 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42983apa ultra-conserved element locus
            uce-1893, sequence.
ACCESSION   KCKM01002740
VERSION     KCKM01002740.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 881)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 881)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..881
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42983apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>881
                     /note="ultra-conserved element locus uce-1893"
BASE COUNT          257 a          203 c          179 g          242 t
ORIGIN      
        1 tccataccaa gtcaagttca ttaaggagct gcaccctcgg cggtgatgca atactccatt
       61 actctccact ttaattgctt tcttttaagt gcaggaagaa aagtcaagat tggacataga
      121 aggagacaat tgcttttggc ctgttgtgac tgagtttaca tgtagaggtg ccttctggtc
      181 tagttgctga agggaaaaca agtacaaatg tctcggcctt ggctgttagg gtctgattat
      241 aagcactgtg ctagagaatt catggattat tcatgtgtaa ttacagatag ctattgtgct
      301 cttttaaatc atccctatgg cccattatgg cccataacaa ctgaaatagc aattgtcata
      361 gtaaggtttg ggctctgtca tagagtgtag gctctaatca ataatgatga atggcaaaat
      421 ttagcatcaa gcaggagaaa gtctagttgc ctcctgccat aaatctgtac aaataccaag
      481 ccgtgcagct gctggatctg gaaatttaaa aggcaacact ctccctccac cccctacaca
      541 cgcacctcta taaaagttga aaaaggagaa atgtgcaata tgtcaattct aataatccac
      601 atgctgttaa gacacttttc tatttattca aagcggggtg aaccctaggt tgttttcaag
      661 gtcaattcca ggtgaaaggg gggtcatctg gaggccacct cggctcccat gcaggtcaat
      721 aacgcctcct cgctgcccca gaagacaagc tgctcacacc caatcaatcc accaacgctg
      781 ccgctgcacc cagcgtaatg aacagtgaat aaatgtagcc tatcatcaca aaacatgctt
      841 tttaagtacc ttcccttttc atgtaaaacc tctcgctgtc a
//
LOCUS       KCKM01002741             865 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 42999apa ultra-conserved element locus
            uce-1526, sequence.
ACCESSION   KCKM01002741
VERSION     KCKM01002741.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 865)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 865)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..865
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42999apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>865
                     /note="ultra-conserved element locus uce-1526"
BASE COUNT          288 a          131 c          146 g          300 t
ORIGIN      
        1 tgctgttaag tttacaggta gtaattacga atgtttaata ttagaaagga caatactatt
       61 aatgcagtcg cacatcagtg tgaaaccaaa ggatatctgt tcctgcgaca gcctagaatt
      121 caaattttca gtagctaaat gagtgagttt tgtaatcccc tgcataacct agttattata
      181 atgcccttgt tatgaattct gtaatatttc tgcaaactca tataaccagg taattgatgc
      241 aactgaaatt cttgtcacat atttattgca ctatcagcta aaatttttaa gtgacaagaa
      301 gcaaaataat cattaatttt tatagggcaa ggatctggct ttttgtttga cacaaagctg
      361 tataaaaaac tgcttctgat tttatgcaca ttgtttttag ttaatgattt tcagctgttt
      421 gttgttcctc tgatagcatg aaaatgtacc atatgctcag ccaaaagaca aatgattagc
      481 aaatgaaatt ctggacagct gtctgactga aagcgtttgg ttgatagcat tctgctatca
      541 taattagctt aagctttggg ttaattaact ttctacctgg atatgcataa taatagcaaa
      601 ctgcaaaaag caagaagctt tcagtacatc aacaacattg ctgtcttttt tatttggtat
      661 ttcaagagca tattagaatt tcaagagtga ttaatcctgg gaatattgtc atctactgta
      721 gattttattt gcaagccaga taatactgaa acaattggaa tctattatac agcagaaata
      781 gcattttaaa attgtaatta aagtttctaa aagcaattgc taatttcaaa tgcctttgtt
      841 ggcaagaata ttaggcatat tggtc
//
LOCUS       KCKM01002742             755 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43014apa ultra-conserved element locus
            uce-6346, sequence.
ACCESSION   KCKM01002742
VERSION     KCKM01002742.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 755)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 755)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..755
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43014apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>755
                     /note="ultra-conserved element locus uce-6346"
BASE COUNT          236 a          126 c          130 g          263 t
ORIGIN      
        1 aaaatgcacc caatgtcagt cttcatagag gaatttctct ttactaagtt tatttcaaga
       61 agagtttaga agagtttact ttggttacct aaactggtgg ttataaagct ccaaaactag
      121 agaattcgtt gttttgatgc tgtgcaaaaa cgaattacag ttctattcta gttcagcaat
      181 gcatcttatt tagaccaact taatcttgag gaaatgatgc tttagcttga aagcagaatt
      241 aagaaggatt tctttcaaaa gtattgtttg ttgaacttaa gtggttatat ccaatagtct
      301 tattcagtgc tacaatcttt ttgaacaggg aatggccaaa tccagtgcta ttgaaacagc
      361 cagaagaatg caatcttaat ttgcctgtat gggacccaag ggttagtgta ttattttttc
      421 ccctataagt cacactgtac gataaattca gttgcttaaa gaatcctagg tgaacttcat
      481 ttggagttta ttaaacttaa tgttttggta ctatgtcatc tttgtaagca acctctagtt
      541 ctcctgagca tgaaacaaag cttgattttc taaactgact gcttgaagca cacttgctga
      601 acaatgtact ttttactccc accttttgca ataagtgatc ttaatggaaa atcagtggaa
      661 tatacgactt aaagcaatgc atttttcaaa gactgttaat cttaaaacag tttgcttctg
      721 acttaaaacc cgttactttt gcaagtatat tgatt
//
LOCUS       KCKM01002743             986 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43030apa ultra-conserved element locus
            uce-3016, sequence.
ACCESSION   KCKM01002743
VERSION     KCKM01002743.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 986)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 986)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..986
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43030apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>986
                     /note="ultra-conserved element locus uce-3016"
BASE COUNT          298 a          171 c          156 g          361 t
ORIGIN      
        1 gtactatgtt ctcaggaata caaagcttta acctatatgt ccagcagaaa aatgttgctc
       61 ttcagtcaga attcacccaa cagaggaaga aatagtttgc cagattcagt ccctcctcat
      121 tctatttaat ctatttactt attaatattt ttccagcccc aacgtccaca aaagttattc
      181 catcaacaga aatatctgtc taaataagtg tgaggattac attagaaaaa tattagcatt
      241 acttcttgcc tgcatatgag tgtgtcatat ttcattatgc tttgtaaaaa aaccccacaa
      301 actaatggca gcattggaag aaatgcatct gtttgatcaa attattattc tgtctgattt
      361 aattttttct ctgtttttca gaacgttttt gtagataaac cagcatttcc agaatacaaa
      421 gtttcagatg caaaaaaatc caaattcata ctgttgcatt ttagcacttt taaagctggc
      481 tgggactggc ttattttact ggcaacgttt tatgttgctg tgactgtacc ttacaatgtt
      541 tgctttattg gacatgatga gctgtctaca actcgaagca caactgtcag tgacattgcg
      601 gtggaaattc tttttatcat tggtaagata tatttggggt tttttgggga tctctttttt
      661 gacaaccaag gttttcacag aatgtataat ataggaagga tcataataat cactttatga
      721 ttgtaaaaaa atcagtttta gatgtatagt ttgagatttt atctgaactt tagatcactt
      781 tttttttttt ttttacttta aattccttcc tatagttcta cttttgctca aaagggacct
      841 ttaagctgaa ggatgattga aagccattgt ttcaccctat ggatacctaa aacgatccca
      901 acaccaggat gtgccctgga attactagta gtgttgttta taatatactt tttttttcct
      961 attacctttc acaaacactt agaaga
//
LOCUS       KCKM01002744             929 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43059apa ultra-conserved element locus
            uce-42, sequence.
ACCESSION   KCKM01002744
VERSION     KCKM01002744.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 929)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 929)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..929
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43059apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>929
                     /note="ultra-conserved element locus uce-42"
BASE COUNT          296 a          161 c          148 g          324 t
ORIGIN      
        1 tcccattcaa gataaaataa gtttaatgct attacatgct aggctgatta gaggactgat
       61 aattttgttt ttaaaatttg tgtgtgattg tctaacctgg ccactaggtc tctactctga
      121 tctttgaaat acttgatctg tttgggggca aaaaagcgga aactgaaaac tgctactgtt
      181 tcatgccctt tgctaaaaca tagctagaaa gagggacaaa tttatacttc aaaaaaaata
      241 tacatctttt aaaaaatcat catcaccagt catttctcta aatgttcaga gacatttcat
      301 gaccacttta actacagaaa tatgccaaac aattgtgaat cttagtaata ttttagtctt
      361 tgcatatttt cactgtctta ctgaaaacaa aaggaatttc tgtaaccgta tgaatgaacc
      421 atggcatgtg cgtgttcttt taagaaaggc caagggtgca gttctatttt cttagctctg
      481 ctttcatatt tatgtgtctc atttccagct cattgctgat gccttagttg cactatccat
      541 caacactttt atcctccttg ttcctcaaaa agaacataaa atcctttttt atgtggtggt
      601 aatattattg caaataaaag caaataccaa aatctttatt agtctgccaa aataataaac
      661 tatttaataa aagcatgctg taaaaataag gtcatttgca tcactcaagt ttcttgcagg
      721 aaatacagag aattattggt caaaaagtac aaactgacag caattatttc tgttgttgat
      781 ctaatgctgc ctgaaaatgg gttaaaaaat tcactgaggt tttccaagtt cgctgtcttt
      841 aaatgtttgt ttttaatgct gttgtatacg gaggagtctg ggagaatcac atttttcaaa
      901 gctctgcttt tttaccagtc ttctccata
//
LOCUS       KCKM01002745             775 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43075apa ultra-conserved element locus
            uce-4554, sequence.
ACCESSION   KCKM01002745
VERSION     KCKM01002745.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 775)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 775)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..775
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43075apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>775
                     /note="ultra-conserved element locus uce-4554"
BASE COUNT          253 a          139 c          132 g          251 t
ORIGIN      
        1 aatgacatat tttttacaca cctcaactgt caacatttct aatcaaatca tctagccttc
       61 ttgcttctta aatgatacaa gcaatatttc ctgtaataaa cacccctaag tctaatgaga
      121 ggccctaagg caacttcaaa tgtatgaatt cattataatt gaacaacata atctgcaggg
      181 caaagatgcc tgctacccag tcttttaact tcgcccggct tgggtgttct atgaaaaatg
      241 ttatacattt tgtttacaat gtattgctgc tatttgaagt attgtatgct cctgtagtac
      301 ataagatggg gacgcataat ggaggaaaaa tcaaggaagc aatctttcat tttgttctcg
      361 tatgaaaaat tcaaaagact gaaaaactca cccagagaaa ttttgcaagc gtattatttt
      421 ccgatgtttc gatcaatttg tctgtcaacc atgctgagag gtggaagggg ccagcaaaag
      481 caatttagct tgtgaggtcc aaaatagaaa tgttttagga aaccttgtca cacgttattt
      541 ttttatcctg gaaccgctgc gttttttatt tgctagtcat attatgaaga gaaattggta
      601 tcaatcatct aaatcaccta tgaatatctg atacaactat tacttttgtg catataaata
      661 aggaaggaaa aaatatttaa atgcagcttt taaagcatag caaaaccttt gggtagacaa
      721 caggctccct acttgagttt tcccatttaa aaaatatccc gtgcgtttta attga
//
LOCUS       KCKM01002746             740 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43091apa ultra-conserved element locus
            uce-4420, sequence.
ACCESSION   KCKM01002746
VERSION     KCKM01002746.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 740)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 740)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..740
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43091apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>740
                     /note="ultra-conserved element locus uce-4420"
BASE COUNT          257 a          147 c          122 g          214 t
ORIGIN      
        1 aaagacaatg ataacaaaaa cgaaaaagag tattgttgac atttattaga tcttttttca
       61 tctgaatata aatttgtatt attaattgtg caccagataa agtaaacatg ctctatctcc
      121 actcctccat gtacacacgc cttaaaaatc agaaatcaga aagagatgaa aaacgaaaaa
      181 gagacagaag taaactacaa acttcaattg tgaactcatc aagagtccaa attccgtttt
      241 tttagaacat tttccccttt taactaaagt gatgcagtcc ctattcattt gtattcccct
      301 tcaagtaaca tgaaatagct ttcagagtct acagaaaggc aatgtttcac ttatgtattt
      361 taatgagcac cgatgtcagt aataatcaaa atgatgtttc acttagagga atagtttatt
      421 cccaggtact tcttcatagt agtaacgtaa ccagaaaaag aatgacaaaa accaagaaaa
      481 ggagctgtac tcgctagcaa tttctgtgaa gccctcaaac caaatatacc tctcctattg
      541 ctgtataagt gttgcacata atgcagtcac tgcaagggac tcacacaaag cagggcttaa
      601 ccatccctat gactaacctt tttcttcttt tgtacttgga aagaaaagaa gtttgtgcat
      661 ccataagcat tctgtggcat gcccagagcg cctgtggatt agcagctact acagcaggtt
      721 tcttcaggct gacagctgta
//
LOCUS       KCKM01002747             794 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43105apa ultra-conserved element locus
            uce-517, sequence.
ACCESSION   KCKM01002747
VERSION     KCKM01002747.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 794)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 794)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..794
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43105apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>794
                     /note="ultra-conserved element locus uce-517"
BASE COUNT          267 a          154 c          222 g          151 t
ORIGIN      
        1 gaagacagat aaggaaaaag ctcgaagaaa atttaggaat acagagacct gagggaagag
       61 gaagagaatt aaaggaggag gaaggctcga agagtgcagg aaaacttaag aggatcagct
      121 ggatagggag gaaacagcta cggcagaggt gggaagagat aatgaaagcg agagacagaa
      181 agagaacggg agagattaag gagagcaaat aaacctggga gagggaatag ttggagcgga
      241 tgggaagagg gaaagcagga gcggaaaact aggagagaag gaaggaggga cagagggagg
      301 gatgtggagg gagaaggaag gagacagagg gaggagacaa ggattgaagt ctcccagccc
      361 agggaaggtg tagcactgag tgagagagcg ctcactctga gggttaggtt agatttccag
      421 agctcttaga gctcatcgac cagcccgctg gagtcactat tcaacccgag tcccaaacac
      481 acgcctcact aactacttta cagccacttt cattgatttt ctttatcaaa taaacataat
      541 acccgttaca gcaacacttc cttttcgcgc agccagaatg ccacaagctc tgattgctgc
      601 atttctccgg cttgcagttc cccaccctcc acccctaaat aaattgtctt ctttcactta
      661 aatggtcaaa tacattatgg cttgcagaat ttttccgtaa tgtgaaaggc acactgtgag
      721 ctaggcaaat ggtctaaata ataaggtaaa gggtcctcat cctcatcact ggcgtgaaga
      781 caaaattccc cccc
//
LOCUS       KCKM01002748             790 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43121apa ultra-conserved element locus
            uce-3555, sequence.
ACCESSION   KCKM01002748
VERSION     KCKM01002748.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 790)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 790)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..790
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43121apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>790
                     /note="ultra-conserved element locus uce-3555"
BASE COUNT          234 a          168 c          178 g          210 t
ORIGIN      
        1 agttgttctg acagttgcct ttggtacaag tcactttaca gatgctgggt gtaaagacca
       61 ccttgatgcg accagtgtga tttcccactg tcagcggagg caaagaaaag aagaaaaata
      121 aacagatcac cttggtatcc attgatttcc ttcaaaaagt ttggtgggaa aaaaaaaagg
      181 cgggggggag aaaaaggcaa caggtctaca gaaggagggc agtctgcagt gctctctctc
      241 atagatctcc agtggtgtct ctgaaacagg agtaggaagc ttagcaaaca gaactccggg
      301 atccgctcca aaaccacatt taaagtcaag tcactggagt gggattagta atcacaatgc
      361 tgtactttat tcacaggcag acaaagagca ataccaaggg catgacagct taaacagcca
      421 gccctgacag gcagatgtaa tgtaaagagg ctggctgcgc acctatcggt gaaaaaactc
      481 ttgtgtcctc ctgcatactt ttcctgtttc tgcacttatt aagtcactat ttgtagctcg
      541 acccttggaa atgttttagg catgcggcat gtctgaaaac atctgtctca aatctcctgg
      601 caccccggtc tgaagtggtc aaaccttgtg acgcagctgc ctggacccat tttttcacag
      661 gtttttggca ctatttttcc acaaggattt acatattata gactgagtct ttctgtcagc
      721 tcttgtttaa gtaataaata tcttcaagaa aagagaagca tcaatgcttg aaaatgctag
      781 ttctgaactc
//
LOCUS       KCKM01002749             682 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43136apa ultra-conserved element locus
            uce-1850, sequence.
ACCESSION   KCKM01002749
VERSION     KCKM01002749.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 682)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 682)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..682
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43136apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>682
                     /note="ultra-conserved element locus uce-1850"
BASE COUNT          210 a          135 c          145 g          192 t
ORIGIN      
        1 cccagtctgt gtgttaccta cgcacacatt tgttttttct acactgccat gtcagagcat
       61 ctagaacctg acgctaggtg tacaacaaaa ctttgcagag gggcgagatt ttgcaaaaga
      121 gaaacgaccc ttttaactcg tgaccgcagt taccgcccac atttcctcgc aagtggtgaa
      181 tgagaggtct gattaaacat gatacaaaaa gagcttgcaa gtagcactgt ttactaacat
      241 ttcaatttct atgcctcatt tattagactt agaataaaaa ggttagaggg gtgtttggga
      301 ttgtctttaa ccttgatgat atttccactg aagcagcata atggctctta attgcttaag
      361 tgaagagaac atgttgacat gtccttcttt gtgcttaaag ctctgtgcct aaaccattat
      421 gctaattcaa gcattatata caccaaagta tttatgggac tgacacaagt gatgttgcag
      481 gtaaagggct gtgaaatggt ctgtaaacag agagaattga ttccaggccc aaagcaatgc
      541 tgttaaagtc acagacattg aacagccagc cctacaattt ctatccagat tgtcaaactg
      601 ggtcaggcag tgtcagcagg gctgccgtta gagatcagat gggtggcttt aataatatgt
      661 aaaccaacca cataaacatg aa
//
LOCUS       KCKM01002750             243 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43152apa ultra-conserved element locus
            uce-2731, sequence.
ACCESSION   KCKM01002750
VERSION     KCKM01002750.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 243)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 243)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43152apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>243
                     /note="ultra-conserved element locus uce-2731"
BASE COUNT           99 a           32 c           41 g           71 t
ORIGIN      
        1 tcattaacaa tatgagtcct acgagggaat atcaattaaa atatgcacag ctgaactttc
       61 aaatgagtaa ataatttagt ttttgaaaat gactggaaac agcaggataa cagtcaaaag
      121 gggaacaatt attttaatgc ttatttgaca aatgagtaat ttttacagca aattagtttc
      181 ttatcatagc acccctactg gtaacaagag agaaactgtt aacaggagtt ttaaaaataa
      241 aag
//
LOCUS       KCKM01002751             970 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43167apa ultra-conserved element locus
            uce-1743, sequence.
ACCESSION   KCKM01002751
VERSION     KCKM01002751.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 970)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 970)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..970
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43167apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>970
                     /note="ultra-conserved element locus uce-1743"
BASE COUNT          309 a          192 c          155 g          314 t
ORIGIN      
        1 tattttaatg catgcaataa tttgagttat aacaactgca aaagtcagtc tattttgttt
       61 tatggattat caacagcctt atgaccttga aaatagctga gttgactcac tgatttttac
      121 agtttaacca tatagcataa ttttatcaac tttgtctaat cttgtgaaag tgcaatgctc
      181 taaaaacaga taaatgtccg tttcagaccc acctcagagt gtaagggaag tttgttcttt
      241 cctaggcatt atttaaggat agctgtcgaa ctggtcacac gacacattaa aaaattcttt
      301 tgtttcgctg caacgctaaa cgaagtcctt taatatacaa atgacagaga gtagcactga
      361 cccgcattta attcctccct aaaaaacgtg caagcaaagg aaaggtaaag aggaagaacg
      421 gttaacccct ggtgaccaaa ggtgcacttg atctgttatt ttgtattcca tactcttcaa
      481 agagcaatat aaacagaatt atttatgccc agcaaaatgt tgcttaatta cttatgcacc
      541 actgtttgct tgtattttaa gctctctcta ccacccacag gcagacgtta aacagctgct
      601 aaaagctagc tttagtcttg cctgtttgaa attagcatac ttgagctttg aaaaaacttt
      661 gttgccaatt tacatatgca tagagactga tatttagact caccatatga tatgtccctc
      721 aagagctttt cttattgcct ccatcctcag gtctcaacct agagactgta aatctagcag
      781 gtgattaatt ctataccctt gagaaactag caattagcac ttgcaaccag taaaaaattg
      841 tcatttcaaa accctgttta ctatgcccat gtattttcta tgaactcaca gttaactcta
      901 aatagatata tatggcaatg gatttgcagt tgcttctgtc tctttatgta aaaatacaat
      961 atagcttcca
//
LOCUS       KCKM01002752             942 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43183apa ultra-conserved element locus
            uce-7423, sequence.
ACCESSION   KCKM01002752
VERSION     KCKM01002752.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 942)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 942)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..942
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43183apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>942
                     /note="ultra-conserved element locus uce-7423"
BASE COUNT          315 a          176 c          175 g          276 t
ORIGIN      
        1 aatcagctct gatggttttt ttatacatct gtaacatcct taacagcaaa atgaagcccc
       61 agactccttt gtggaaaaga aatcagttga gaacctgttc ctagtgtaag cctagtgcac
      121 taattgtgaa tcattttgag aagctgctca ttgacagctt catgctggga agtctaaatg
      181 actctgtccc acttttctca gagggagaga gtcatttgcg cagatctttc tacggcttga
      241 atcccagcct ccacaacaca agatgtgcta agtaaggcaa cagcatttag gaacataatg
      301 aatgtgcata cacaagtatg aagacatact tgtaagctgg tactggtaag gaagagtaca
      361 ttattcgatg tatcctcttt gaaaaaaatc aataaaattc atatacagta tgctcattgt
      421 aaaacgacat gtgctgcatt taatactcac tgacgtgaca cttaacaaac agtcttgaac
      481 tgaactctat ttgcatttga tttctgtcac aacttgacaa aaaagtctgt tgctttcatc
      541 tgctttttct ttttaacact tctaaccaaa gatacatagg tgtaccttgc aggcagaata
      601 aaaagcaaag tgccctctga aagggtctca aacccttttc cctacatgtt tataatgtac
      661 cccaatgttc agtcactttc caagctcagc agagataaca aacaatgatt ttaagaccta
      721 ctgaatattt tgtgaatttt cataaaatat acatggataa aggggcaaga aatagagaat
      781 tgtcctgatc ttacatgagg gaatggtctt ttaaaagaaa cctttgccca tatgtgattg
      841 gagtcgagaa aggatcatac aagaagaata gaagaaagtt ttaaaacaga gccaggtata
      901 tctgaggatt tgagataatc tgaaatcatg ctgtgacgaa tc
//
LOCUS       KCKM01002753             817 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43198apa ultra-conserved element locus
            uce-7296, sequence.
ACCESSION   KCKM01002753
VERSION     KCKM01002753.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 817)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 817)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..817
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43198apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>817
                     /note="ultra-conserved element locus uce-7296"
BASE COUNT          265 a          151 c          154 g          247 t
ORIGIN      
        1 tgttgacatt ctgcatgtgt aagaaaaact tatgtatgta gatttctctc acaagagctt
       61 cagggcataa cccagacaga gaagccatca cttttccatt ctgcacccag gctgctgaca
      121 aaagaattgt gcaaatgagc ctttaaatcc ttaaatagtc actacacaat gcatgaaaga
      181 atgcagcgcc ggacaaaggg caatattcac agtttatctc agggtgatgg atctgaatcg
      241 acgcatgaac atgggtttgt tacgggatgg agtaggccgc aaacccctac tgagaaccca
      301 gtggccacag tctgtaatgc aaacagtcag gctaagtcct taacaattag ggtaaattga
      361 actggccatt atctgaactt caacttgttc tcatgattga tatgggaaat gaaaagttgt
      421 atgtatctct acaaagacca catgttttct tctcctgacc aatgttagga attggaaggt
      481 tcatattttg atgcagaaat tccttagtct gtatctccat ttaataaaag tgctagtgct
      541 tacattcaca ttgcaatgaa tgttaccaat tttgtgggtt tcctagaatt ttagctatat
      601 atgacacata aaaaataagt ttataaaact gaatctgtac tgactaagag tagataattt
      661 acactaatat ctaatctaga ctaataattt atgtggacaa atacatgttc atccaacatt
      721 ctctacactg caagtctgtt atcagtctgt ataaatattc ataggcaacc tgaagctgaa
      781 gagttatgtg tcttgaggta ttcagtactt caggaaa
//
LOCUS       KCKM01002754             902 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43214apa ultra-conserved element locus
            uce-7941, sequence.
ACCESSION   KCKM01002754
VERSION     KCKM01002754.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 902)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 902)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..902
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43214apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>902
                     /note="ultra-conserved element locus uce-7941"
BASE COUNT          265 a          174 c          177 g          286 t
ORIGIN      
        1 agtaattgaa ttctttgcgt cccaaatttc aaagcagaat aaagacactt attgtgtttt
       61 aatttaagcc aatccatagt attttcttgt gacactgtgc tcagatttgg ttctgaaagc
      121 cctaaagttt atttgtgaga gctttcaggt taattctatg gattatatgg tattcttcgc
      181 tatgaagttt taaaagatac aaaagaaaaa accttgttca aatgtagaag ttatttttgc
      241 agtaacgtat gtcatgattt ttaaacattc aggcctttaa actttttttt ttttatagtg
      301 tatgttcttg ccaatcccag cacagttcta caaagtaaaa tatttggcag tgaattcata
      361 ttaacagatg gaacaagaaa ttaacacgtt tttgcttcgc taattcacag ttcttttaat
      421 acgctaattc taaatcacct gttctgactt tgacaggcta cagacacctg tttggggtaa
      481 tattccacag ctaattatta catgagaaac tcggtttcca acaaaagggt ttctgtgtga
      541 aattgtcata gttaacaaat tagtaatacc aactttccac aaaaatagct tgcagtttta
      601 atttacatgt gcttaaactt gcctggagaa ctggaagctg tgggattgct cggggggcag
      661 ccttcctcct cccagcacac cggtgagatg ctgcctccgt cccttaccca ccggcgttgt
      721 agagctcccc atggatgtcc tgctccgtgt agcgtgagtc agtgatacca gccagtgagc
      781 aacactgtgc tgctcaccaa aaaccaggcg tagagggcaa gaagtttctt ctaaggagaa
      841 agcttgaagt aatttccagt tcactggggc tggtgcagct taaagtcaga gtaagacaaa
      901 aa
//
LOCUS       KCKM01002755            1229 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43229apa ultra-conserved element locus
            uce-1747, sequence.
ACCESSION   KCKM01002755
VERSION     KCKM01002755.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1229)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1229)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1229
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43229apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1229
                     /note="ultra-conserved element locus uce-1747"
BASE COUNT          397 a          234 c          253 g          345 t
ORIGIN      
        1 ttttttctgg aggaggtata caatcaggct aatggataat aattgcagaa ctaggcaact
       61 gaaatttatt aagcaaaact tttgtcagaa ccttgaaccg atgcttgcaa gctcctggtg
      121 cactacagtc acaccgctca gacaaggaag agcagctctt gttacagcaa gcagagttgt
      181 agttgaagta ctggaaaaat ggaaagaaca cacagggtga ttttgctgcg tacgaatctt
      241 tcctttcaaa aggcattaaa aaagacaggg aaaaggtaga acatggagaa gttaagctgt
      301 gtggtagact gggctgcagt ttctcagaag tttaatctgt actgctagtc acataaaaaa
      361 acagatgctg gcctcagtat tttcttgcag tgttgttttt gattgaaaac tttgtgaatg
      421 tttgtgatat tgctgagagc ctattggctg atgagcatct cttgctatag tctccatcat
      481 tatttgcctg tcttgtctat taacgagcac tatcatccca tcgtaagatg acagctgcaa
      541 cacgtactca ggcgcaataa acagctaaat gaggcgcaca gcaatttcac ttgtcaccag
      601 agccctcggc acgactggct gcacagcttg atgcataaat tcatgaggct gttgcatatg
      661 atggagtatg cctggctgaa agaggtgatg gatagcaggg cagctaaaaa tggccatcac
      721 cttgactctg tcaggacatt ttttaaaagt accccatcag ctctcttgca ttctttcatg
      781 tacactaccc ccaagctata ggcttgtaaa ggtaccgata taagactttt ccttagtgaa
      841 ggtttttgta tctaaagtca agtttcttct taggttcagc gaacaaaata tacgagacta
      901 atgtgtaggg tgaaatggtc ctataataat tgttcattca acacagagca gagtcataag
      961 gttaaacact aacaacagaa attttcaatt ttccagagta tgtctgaaat cctggtaaaa
     1021 cacatacata cacacagaga catatataaa agcaaaacac gcaaagtctc atgcaaaagt
     1081 gcgtttgatt acacatatgc atacaaaaac gcgttttgca aaaagctgta gaaggtgttc
     1141 ttgagtacat tatggtaatt aaacattatg caaacccaat acaggtcgaa ataacttgcc
     1201 attacgtact attagatctg aattaacaa
//
LOCUS       KCKM01002756             937 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43243apa ultra-conserved element locus
            uce-1892, sequence.
ACCESSION   KCKM01002756
VERSION     KCKM01002756.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 937)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 937)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..937
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43243apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>937
                     /note="ultra-conserved element locus uce-1892"
BASE COUNT          296 a          141 c          174 g          326 t
ORIGIN      
        1 tttcatttat aaagtgacta tttagataca cacaacacat atataatata catatttatg
       61 aattttagac agaaatttca gagtattata agttttcttc atattttaga tattcataag
      121 aaatctttcc cactgcttta aatgttcagt taaacaagga tgtacatttt atatgtatat
      181 ttctcttttt aaaatatctt gatatattta aagaaagaac tgatgtgttg tatgatttac
      241 agtcttggag aaaaataaca tagtcataac tttgcagttt ttgtgatgca tgaagatcag
      301 attttttaat gttggttaat gctttactaa ttaaagtgtg catgttaatt aaagcagagg
      361 ctaatgttaa ttacctatat taatggaatc tcatgtagca cctgcctgaa gcaatgggtt
      421 caattttcaa aatatctcaa ttaaggctga aacttttgat ttgcatctag tagggtttca
      481 attaactgca ttgcaaactt aaataacaca cttaaaggga taatatcacc aatcacatgc
      541 agcacagtgg aattggtcgg ttcaattatt gactacggct acaagagctt tcacagttgg
      601 taggtaagta ctgtggtatt ggcaagtgat tattgtctag ggctgtcatc gcttcggtgc
      661 ctgttgtaag agagatgtta aattgctgta cttgggtctt actgcaattc cattgttgag
      721 ggagacaaaa atagaatggt gtttgctcac acacagtgtt taatggtgaa gattcagctt
      781 gttcttctga aataaatgac cactgttcca tgacatggta aggcatttta tcaaatggga
      841 aagcagcatt tgtgataaag tgtgcaatgt tgcggcgcac ttctcagcca agccaagaga
      901 tgtgattgta ttcccaatct ctctttcagc taccaca
//
LOCUS       KCKM01002757             991 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43259apa ultra-conserved element locus
            uce-5774, sequence.
ACCESSION   KCKM01002757
VERSION     KCKM01002757.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 991)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 991)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..991
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43259apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>991
                     /note="ultra-conserved element locus uce-5774"
BASE COUNT          273 a          205 c          229 g          284 t
ORIGIN      
        1 cagccctttc tatctcagag ctttgatcct agccctggag ggctacaagc taggagaatg
       61 tcctgcggag agcatgcagc tgagcacagg actcgtgtca tcttgcttca aacttctgta
      121 tcagtgtttt tggggttgaa aacaacagag ccttgctttg tgcatgaaaa tgaactgtcc
      181 tgttgtagga gatgaacaaa catttagcac ctttctcagc cactgacgct tttcagtgca
      241 gcgttcccaa gtggagcaat ggtaaattgt ctcaaccaca gcactttacg ttattacagg
      301 tgttggtaac gacacttaaa agccacaaac tcttttctct agcgatgcca gtgacccaga
      361 agtaaaataa gtgtttttag aatgtgtgga aaatcatctg atcgttttgt gcgtcccttt
      421 gatttaatat tctttttcag gtttacaagg ccagaacatc taggaagcag tgccaaaatc
      481 aaatgtagtg gttgccatag ctaccaggaa tctaccaaac aactcactat gaagaagtta
      541 cccattgtgg cctgttttca tctcaaagta agttcacagg gggcagacag atcacaggac
      601 gtgtattcct ttctgagagc taaatttctg tgcgtatctt ctggctttca cttacctgct
      661 gtaaggatgc ctcagaggaa ctctgtgttg aaggaaaagc atggaaaagc tatcaattgc
      721 aatggagaag actccctgtc tcttcccaac tgtgatgtag ttttcagcat ttccagtcca
      781 gactgtcaga tgcagggatg ggagataatg tcatatttgt tgccctcaga tagcttaaat
      841 ataaaaagtg tgactgttgc aaagtaagca gctgttgaga agatgaaggt cattctgtgt
      901 caaggggcaa agggtccttg aaaagtgata ccacaaggtt ttgcagaggc agccagcgta
      961 ggcatttcct gcatctttga tctgcttgag c
//
LOCUS       KCKM01002758             628 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43273apa ultra-conserved element locus
            uce-2595, sequence.
ACCESSION   KCKM01002758
VERSION     KCKM01002758.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 628)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 628)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43273apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>628
                     /note="ultra-conserved element locus uce-2595"
BASE COUNT          196 a          123 c          149 g          160 t
ORIGIN      
        1 tggcttacag atagtctcat actgtttggg ttttcactga gcttcctacc ttgggaaagt
       61 taaataccat gcagaattgc atggtacgaa gtgagtgcta tgtgcaacca ctggatttct
      121 tgttcccagg aaagtttagc gttagaggta tccagtgtag caagcaatgt atgtcttacc
      181 aggcattttc cattctctga ggttagctgc agaaagcagc ccggtaaatc ttgtattcac
      241 aaaaatcgac ataggattgt aacagatggg gtctgtttag gtttggcttt ttttaacagc
      301 acgaggaagg gttctcaact aaactgcatt agataatccg tcagcaagag agttcagtcg
      361 aaaggactga aaggggaaaa aaatcccatt catttacagc tacagccatc caagttaaaa
      421 cctctctcgc ctgacagcag caagtggcaa acttagggaa gcaatgggtc atgggaaagg
      481 tcccattaga tcagtgggag cacacactaa acaaatacag ccacatggat gcacacattt
      541 aaatactgcc caagggaata tgtggacata tgttcagtgt ggctgagaga agcaggctct
      601 aggcctcgag aaagctatgt aaaaaaaa
//
LOCUS       KCKM01002759             765 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43288apa ultra-conserved element locus
            uce-5290, sequence.
ACCESSION   KCKM01002759
VERSION     KCKM01002759.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 765)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 765)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..765
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43288apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>765
                     /note="ultra-conserved element locus uce-5290"
BASE COUNT          246 a          157 c          147 g          215 t
ORIGIN      
        1 gcaaatcaag gtaagagccc tatgtacaaa acaaatggag tcttcctcac ctttggcttg
       61 agcaaacaaa aagaaaggga tttcagcagc attgtcttta atccaattta ctttggattt
      121 aatctccaaa acaaggctgg cctgctaatt cccaattata atggcacatg taatcagagt
      181 cctcattaac aaagactgac tatattgtct attaggaatg gaaatctgaa atgcaaattc
      241 agcaaatcaa aacgttaaat gagctctacc caagatgctt agagctcctg ccagggcagc
      301 gcatgctggc cgacacctgc cctgaattct ccctccagct gaatgtttca ttctgttcca
      361 gtctttgcct cctaattgac ctgcttatga tctctgctac aattaacata tgcttattag
      421 taatggctgg ttaaagattt caaactgccg cagtttacaa agtctaatag agatggcaca
      481 ccacaggaaa gatgagacca gtgtttccct catcagcaat gtcttagtgg tttggtttca
      541 tgtgattcaa atgagataat ttttcacatc atctgatgtc tgcagatcca ttctaattga
      601 aactggaaat ctgcacacaa agtggcttaa ggctcctggt gcactaaatg aaaatcagtt
      661 agtgaatatg atttttctcc cctttaacca catgcttagt agccatggga aaaagacttt
      721 taaaaagaag gggacaagga aagaaagagg gaaaaaagct aggtt
//
LOCUS       KCKM01002760             667 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43304apa ultra-conserved element locus
            uce-6628, sequence.
ACCESSION   KCKM01002760
VERSION     KCKM01002760.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 667)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 667)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..667
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43304apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>667
                     /note="ultra-conserved element locus uce-6628"
BASE COUNT          270 a          119 c           95 g          183 t
ORIGIN      
        1 ggctggcata aaccaaagtc aaaagagaaa caacacaaac tatgatcaat tagaccaacc
       61 actaagacaa aacagtagcc acatcaatat aatttcactt tgacttaggg tgctatctaa
      121 cagatttatt aaaagtttca acagactata gctccagact ttatctttct tggaagacac
      181 tacaatagaa gccacagtag agactgcctt gtcacaagag gtacaagtac ttgctgtata
      241 gatggagaaa taaaaggaca aatctagttg tctaaaagac aattcactgt acacatttta
      301 tttacagttt tgtacactgt cttaatatga atgggaccgc ttttctactt gagccatttt
      361 aaccaaagca aagtaaccta agtaatacaa agtgttaaaa tacagcataa gatacaaaaa
      421 cagacatact atttctagta aggaatgtaa attatggtgt tacattaaaa aaattccaca
      481 attatgttta ggaaatcaca caaacagatc actgatttga ctgaaatgca taaatttgta
      541 gcaaagcttt gatgttacaa aaaaccaaaa aattaccaaa gaatgcacaa aattaatgtt
      601 tattcaacct ttgtcatatt cccagattct tcaccaaatg ttacatgagc aaaaacaact
      661 gaaatca
//
LOCUS       KCKM01002761             971 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43319apa ultra-conserved element locus
            uce-3680, sequence.
ACCESSION   KCKM01002761
VERSION     KCKM01002761.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 971)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 971)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..971
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43319apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>971
                     /note="ultra-conserved element locus uce-3680"
BASE COUNT          233 a          244 c          190 g          304 t
ORIGIN      
        1 tcccacagac cttatttgat cattaccaat ttctaagtct acctctcttt taacctcctg
       61 gtttccattt atttttcctc atttgtacta gcctggatta ttctaagctg attcccgttt
      121 tctctgctgg tccctactcc aaacccttct ggcttatatt ctatttgtct gtctaccgga
      181 atgggtgatg gaagaagcta ttcatgtttc ttcccatcat ttgctgcctg caatgccttg
      241 tttgctcatt ccctcccaga aactgtgtcc ctttctcaca aatggttggc agccaggcag
      301 ctgtgtcttg gctctgtagg agccagggag aatctccttg acctggaaag cagcagctac
      361 ctcgtgctca gcttggctgt gtcagcgtga agcgtgccag ccagctttgc atgtcccaag
      421 taccgcgtga tgcttcctct tataatcagt ctgagcatca ctgcttctcc caattgcccc
      481 ttgcacttaa ttgaccaata gagctagaca tacggaggat cgaatcacaa acccaaatca
      541 gcagttgcca gaggagatta attcaaacag gaagctacaa aacacttggc ttttcttttt
      601 tttttccttt cctttttttt tctcaggcgc caatggaaga aattattaat atccccagct
      661 gtatattcag gcagatggca gtgactccag tgcgctctct ctaaccaact ttctgtgtga
      721 tttctgtagc atttaagtga cactaggaaa ttactggcgc agggaaagaa aggagaaact
      781 gcattcacac cgcctaattc aaagtatcta agttagatta gcctatgcta aaaagacagg
      841 ctgtcttaat tcactgtaca gtcaatgcag agagacaggt gctctgaatt gctctctgga
      901 ggtacttctc actgctggct tctgagaggt gaacatctta agtcaggtac acgtatctac
      961 cctctttcag c
//
LOCUS       KCKM01002762             550 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43335apa ultra-conserved element locus
            uce-4741, sequence.
ACCESSION   KCKM01002762
VERSION     KCKM01002762.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 550)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 550)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43335apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>550
                     /note="ultra-conserved element locus uce-4741"
BASE COUNT          177 a          102 c           86 g          185 t
ORIGIN      
        1 aagcacttca aagtagtctt cctctgagta aatccaaact tggataacct gctggatagt
       61 gaaggaattg attagaaaaa aaaacaaccc acctttaaaa aatatcttat tctcttttca
      121 gattggcact gattttgaaa aatactgcaa actaagtttg ggtcatgtga aaatagcact
      181 gacatttgcc catagtttcc ctctgattaa gtggaagtga caccagtaga ttagaatgag
      241 actaagacaa ttcacattgc aattgtgtta gtttagcttt aacaatcttt taacactctt
      301 gtttaaatgt ggctgacata ccataattac aaatctacaa gccttgatta tagaatttta
      361 catcatgaac ctatggggaa agcgtattga tttttgtgaa gcagctcttt tttaaaacca
      421 cctttctgaa actatggaat cttcccaaga ttgttctttt acctgtcgca ctggtatcga
      481 tactgttttt tctctttgta aaataccgtc atattaccaa gtaatttaca ctgtgattcc
      541 ttcaagcaca
//
LOCUS       KCKM01002763             862 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43351apa ultra-conserved element locus
            uce-608, sequence.
ACCESSION   KCKM01002763
VERSION     KCKM01002763.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 862)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 862)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..862
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43351apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>862
                     /note="ultra-conserved element locus uce-608"
BASE COUNT          241 a          151 c          199 g          271 t
ORIGIN      
        1 agatgagggg tttctccttt cttaaatgaa ttgcaagaca tttttggatt gagatttccc
       61 tgcaagattt catccctcat catggtacag agaatctaga gtgcatctga gaaaagtcga
      121 aaacattttg cttcgctatg ttctttttta cacaaatcaa ccagagttta tttcctctaa
      181 gtgctttatc cggcgtgcgc atccctctgc tattgggcgg ttttgaattc gctttataaa
      241 gattctgtgg atagacccag cattgtcgtc gttaatagaa acctgtgcag tgaggtctat
      301 gggctgcgag atcgctaaca gtgccggtga cagtgaagta tggccttatc gaggggagaa
      361 ttcataagag gctgccctgg gacaccgcac cactgtcctt ctgtgtatcc tgacaatgtt
      421 atctgtcctc tcagtgcgga gtatcaaatg tctgtcacga gtacagaaat taatttaatg
      481 tcacctgaag acatgcaatt aatcttttag aggttttcat aataccttta cagaaagagt
      541 tgccagtttg gcggatttgg attttggggt ttagcggaag ataaggaaaa ttaatttttc
      601 atcagggtta atacaagcta gcagggccac aaaggctgag aaaaatggtt tgggaatttg
      661 tcaagtgttg tcactctaga ataatgctgc ttaacgtctg ataggtgtaa tcaagagttg
      721 agatttctat agaggaggat taatcaattt gctcactaca gaatgcaagt tggtgatacc
      781 attccttcat ggggtttaag aatgaaaata agatttgatc tgtcaaattg taagcggctc
      841 tgacagtatc aataggcatt tt
//
LOCUS       KCKM01002764             639 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43366apa ultra-conserved element locus
            uce-1346, sequence.
ACCESSION   KCKM01002764
VERSION     KCKM01002764.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 639)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 639)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..639
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43366apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>639
                     /note="ultra-conserved element locus uce-1346"
BASE COUNT          176 a          142 c          146 g          175 t
ORIGIN      
        1 cccggcttgt ctggcaatca tgttagtgat tatatgggta atgaaacacg tgctcttttt
       61 gtctgcggct ctgattaatc tgctttctat ttagccgtga tttatggcgc tcaactgttg
      121 aggtgagcgc tggcccatca gttccgtagc ctattacggg cgcggcggcg gcgaaatgcc
      181 tgcgaggctt gaactgtttc ttgacagcca ggcttcccgc tacattccct ccaatctgtt
      241 ttgcttcctg gtgtgacctt tcatacagta aaatacatta gttgaatagc acagtctcat
      301 taaaagagtg aattaaccga agagtctttt taactaaatg acagccaaag gactgagtgc
      361 taatagccac gggcagttag aaacttaact catgaatcag gctgttaata ctgctcggtg
      421 cctgaagcgc taagggcacc acactctctg cttgctctca taagaagaaa agctcattac
      481 tttcctcctg atgggagaga aagagtgagc gagcaataat aaagcttgaa tttttcaata
      541 ctgttaaaaa tggggctgac agattgccga caataggagc aacgggctag acactgcaac
      601 gagagccact gaattagcaa taccatatat catacaatc
//
LOCUS       KCKM01002765            1036 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43382apa ultra-conserved element locus
            uce-7949, sequence.
ACCESSION   KCKM01002765
VERSION     KCKM01002765.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1036)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1036)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1036
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43382apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1036
                     /note="ultra-conserved element locus uce-7949"
BASE COUNT          312 a          167 c          146 g          411 t
ORIGIN      
        1 atatattctc ctttacaaga aaaataccat cccatttttc tttcttccat acttgatatt
       61 ggagtattgt gtccatcagc agacagtttc acaatcatac atcttatcat tgtaaagtca
      121 gctctaagcc aaagcccaca gatatttttc accattaggt tcactgacat ttttgtaaat
      181 gctcaagaaa tatactgcag tggtatctgg attttttttt ttatttattt tactaaaatg
      241 ttattgcagg acttcataaa agaacactct ttagaacata ctaaagctat gcttgatgtt
      301 atgcataatg tagaaaattg ccaagctttt ataaaatatg tttatcattt cttaacgtga
      361 tttatttgcc ttgtgtttag actattgcat ggtaaagttt attttgtgca tatacttttt
      421 attttactaa tatattacaa gccatatatc aatgacccct gtacattttt catgctgtct
      481 tactcccaat ggcctctgtg catgtaagta acctgtcaag tgacaatgcc tctttatttg
      541 cttcttactg tttcctttca agaactcctt ttctttataa gctagtaaca cagaaacatt
      601 aaagttcagt ctttaaatgt gccctatatt cctcatatct tgtgtatatt aaaaatttga
      661 tcatttttct tttgcatttg aaaaccctac aatcattagt taaatccatg tagactgaga
      721 cacatcttct ccatgctgct agtttgtgat gaagacatta atatctatca tttctgttgt
      781 ttgttcctgt tgtttgtatc taacataatg tggttttgtt cagaaaggaa ataaaggatt
      841 tattttttta ttatttttta ataggaaaag atatttgcag gcctcgatgg ttagaatgat
      901 agaactgttt aacgtgttgt acatctttaa ccctttctaa tatgaaatga gttatcattt
      961 ttttaaatag tgtgaggttg caaaaaaata ataattccat ttcggtggaa tgtaagaaag
     1021 atatgaataa actctt
//
LOCUS       KCKM01002766             512 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43397apa ultra-conserved element locus
            uce-6249, sequence.
ACCESSION   KCKM01002766
VERSION     KCKM01002766.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 512)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 512)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43397apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>512
                     /note="ultra-conserved element locus uce-6249"
BASE COUNT          135 a          121 c          102 g          154 t
ORIGIN      
        1 cttttccttt tttcccccct tccctttcat tcataaacct ggtggctata gacgcagctt
       61 gaatattgac gtctcttccc ccaactgctc ctccgttaac ccaattacag aattcatcaa
      121 gaactgtgtt gaattatctc tttccataca gtatcagcat tagcctaatt aaaagctata
      181 atgtctgata taatgattaa atcgttagct ctgctgtagg gaagcaatat tttgttttcc
      241 cttcaattag aagctgattg aggttttcag agcaggtcag ctgtgaaatt tgaattatat
      301 gtgtgagtac cgttcacagg gtgagcccct actcgaaagc tccagagatt ctccaaacgc
      361 ttttacccag caagctggga aaagacaaca aaacacacag agagcctgta gctgatttgg
      421 gattggggct gtagcatccc cgggaacagt ttttagtgct ggaaaagaaa gcgggggttt
      481 atgcagacgc cctttttcct ccatcccgtc cc
//
LOCUS       KCKM01002767            1093 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43413apa ultra-conserved element locus
            uce-5924, sequence.
ACCESSION   KCKM01002767
VERSION     KCKM01002767.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1093)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1093)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1093
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43413apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1093
                     /note="ultra-conserved element locus uce-5924"
BASE COUNT          346 a          274 c          188 g          285 t
ORIGIN      
        1 ctcagagaat gaagactgtc cttgccatac cccaaaatcc ccaaaagtac tatcgcagca
       61 actgctgaac tcttcctcaa gagcatactc tactgattta tcagtattta catcctggaa
      121 tacaggtaaa ctttacacaa caattcacaa cctaggtgac tgccccagct ctgcctcctt
      181 agcaactgaa acagtctctc aaactctgaa gaacactgat ctttcaatgt atgttcttca
      241 ctaactaccc tgtgcaaaaa agcatgcttc cactaagagc atcacactct ttttaccttc
      301 agcaccacac actcaaggtg agtaaggctg cagcttcaat tataattctg tagctcaata
      361 gggaagagaa tccaactctt ccaacagtgg cccagtcaaa cctaaacctt gggtatttta
      421 actacatctg ccataacact gtatgtactg taacactctg cacatactgt aagagaagcg
      481 tgcaaacaga tttctgatct actgtgtctt tggtaaaggt ttggcaatag cacttgtccc
      541 tgtagacctt acctcatatt atgatcatct actttattgt gtaacggatc ttttagttac
      601 ctccccgccc atccatgtac acggggaagg gccatgtaca tggcgaagct agagactgta
      661 acctgaagat tggggacaaa ttaaagaaaa aaatgtgatt caacaggatt acataaaggt
      721 aagtcagggt caaacaagaa aagccattta attaattgga gtcaagtaca ttacgttaca
      781 cctgatcttc ccacgcctcc aggattagca actacttcag cagagtatca ctatatgtta
      841 ctgcatttaa cagttaacct attcctccta ccccagttca ctggtggaag cttatgtaca
      901 accaataaca ctaagtgtaa gacgcctctt gcacagttag cacctaaaaa taagcatcag
      961 aaagtctcac cttcaggcga ccactgttct ttcggcactt ctgcaaccag acagtggtag
     1021 aaagggtgct cgccaaaacc atcctcgagc agttctagaa aagcacaata aatcagcacc
     1081 tgagctacga ata
//
LOCUS       KCKM01002768             502 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43429apa ultra-conserved element locus
            uce-4049, sequence.
ACCESSION   KCKM01002768
VERSION     KCKM01002768.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 502)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 502)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43429apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>502
                     /note="ultra-conserved element locus uce-4049"
BASE COUNT          146 a          106 c          106 g          144 t
ORIGIN      
        1 taacacccaa aacagtaatg gcctgctctc caccaccccc agcatttaat cagcagtctt
       61 tttagctgat agagtcctaa gtgatttttc tttcctactt aaggccattc tagatgtgct
      121 cgctatgtgg acctagcagt actggtatat tttatgttag caactcatga tagaaaagtg
      181 cttgaagttc agggggcatt tgtctccttt ctcacaaatt catttaagta ccagtcttgc
      241 cgtagcttta actggggcag acaaccatac aaatgacttg agataaaatg aaaataatgg
      301 actgagctag gtgccggggg tggtagttac actgcatgca catcaataag cattgagtgt
      361 tattctatgc taatgtaagc ctgatggatc agctttcgct tttagcctag aggaccatta
      421 agcactagaa gctgggtcaa actgatacag taaggcagac ctaccctaac ggttggcaac
      481 agcagttaac aagcagtaat tt
//
LOCUS       KCKM01002769            1211 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43444apa ultra-conserved element locus
            uce-2114, sequence.
ACCESSION   KCKM01002769
VERSION     KCKM01002769.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1211)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1211)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1211
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43444apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1211
                     /note="ultra-conserved element locus uce-2114"
BASE COUNT          376 a          223 c          204 g          408 t
ORIGIN      
        1 aggtttcatt tttgcttagg tatattttga ttagaactaa taaataactg attttccttt
       61 ggttgtttgc gacaacaaca catcatccaa agagctttat tctttattcc cttctcatat
      121 atcatgccaa agactgtctc agtttatgaa ttagcattta aaactactgc aagttatcta
      181 acaagcattc agattcaata gtacttttga cagcagtaag taaagagcct tttaacatct
      241 cgaatgcatg tgcttgaaaa aagtagttgc atcaaagcag ttcaaagact gaagacaaaa
      301 accagttaaa atccagtttg ctgtgagaca attttagtgt ggtgtaaaca acctttcacg
      361 actccccatg ggaaatgttt taagtctaca ttcaaaatga atcaggcata tttataaaga
      421 tcatgaagtg gtcaaacgaa tttgcatttt tggcagattc actccacggg taccacttgc
      481 tatagcctgt agaaatctca aatctcacat cagcattgcc tatagtgctt tattatttat
      541 tacatgttat gctaagtacc tgcgaaaggg gacattcctt ggccaatgaa ctctggttca
      601 tatccttcag taagtccttc agagcatttc ttactgttgt gtgagaccat tgttcaggag
      661 gcaagtcttc tagtttaggg caactatttg aaacacagat tagaaaaggg attattacaa
      721 gattgcatcc tgctgcagaa cattccttta agacagacag atttcatttc gcgcatcaag
      781 cagatgcatc tggagattgc tctcggtctc ctgattgttc cgattagtta attactttat
      841 acaacacatc tgctgtattg atgcatgaat tatacatcag ctgcatgtgg cgactatttt
      901 ttcatgttac ttctaccttc ctgctctgat gcacttggta aaacaattta aggtgtaatg
      961 ctttctcacg actgatcatg aaaagcatta atatattaac cgtttttttc ttttttgtta
     1021 ccgtgaaatt taagaaccta gacagcaaga gtaagtgtga gcaagccatt ctttcacaaa
     1081 atgcacacag atggtattgt tcatgatatg caaaaatatt tttctcttaa gtaaacttta
     1141 tgtaaaacgc cttcttgtaa tgcatcattt aattgactaa aatgcaatat agttttaatg
     1201 agatatccaa a
//
LOCUS       KCKM01002770             625 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43460apa ultra-conserved element locus
            uce-6191, sequence.
ACCESSION   KCKM01002770
VERSION     KCKM01002770.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 625)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 625)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..625
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43460apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>625
                     /note="ultra-conserved element locus uce-6191"
BASE COUNT          178 a          150 c          139 g          158 t
ORIGIN      
        1 ttcgcttacg caatatctgg cttcagataa tgaaaggcac ctgcaagaaa ccaagagaag
       61 ctttttaagt cgcgctggga caacctcgca gcatggggcc atgccaacta caggttgaca
      121 ctgtcatatt taataccgac atatcaaagg gacaggacta atatttttat tcctgggaca
      181 agtttgacaa aactctacgt atctgggatt atatactgta atgattcttg agctgacctc
      241 attaagaaca tgtgtttcca atcgcggaat gccagtggtt atttcgtttt ggccaaccct
      301 tatgttttac ctaatggcaa tcaggtttca tgtctcaaca attaataaca tcaagatgtt
      361 gttgacatca cttaagaaaa taattatgcg gcagaaacct cgctcgagcg accggctatc
      421 tgcaaagagg agacgatttg ggatcacaga attgcaaaaa gtgaccggtt ggaagggacc
      481 ttcgaagacc atccaagtcc aacaaccccc tggccacagt gcgatcgccc acccgttgtc
      541 ttgccgcgga cagagcggat tcccttgcta agcaggtccc aacactcact ttggccatac
      601 tggccatact ggtagccggt gacgg
//
LOCUS       KCKM01002771            1048 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43475apa ultra-conserved element locus
            uce-2164, sequence.
ACCESSION   KCKM01002771
VERSION     KCKM01002771.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1048)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1048)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1048
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43475apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1048
                     /note="ultra-conserved element locus uce-2164"
BASE COUNT          287 a          232 c          236 g          293 t
ORIGIN      
        1 gtgtgggaaa ggcctatttt tatttcattt tttcttggct ccattggcct cctctccttt
       61 tcttcgactt tgcgcgaggg aactttagca aacctgtaaa agcctcttgc attatttatt
      121 gcatgcttgt ttacggcata caatgtgctt cattagccaa attcggctct ggacctccca
      181 cgatgccctg gcgagggtaa ggtaatagca ctgtagtatt agtgtcagcc gtgggtcaga
      241 gatgtcatga tggtatatca ttaaaatgtg acactgccag aacctgccct gactcccctg
      301 tccttagaaa agcagccctt ggattttggg ttgcgcgcta ctactgagag ccggcattca
      361 gctgaattgt tcattttgag ggagcagcca gccgcagatc cggacctcca tagtgaaatg
      421 atgggctgcc cggcacaaaa ggggagttct gtaagagcag tgaataatgg gaaacccctt
      481 tcatcggcat tgctaacctt ttggcagcca ccagcaaact ctattctgat ctgctgattg
      541 gggaggacaa tacactgaag ctcactttga atgaatgcta ccaccaacag tgtccccatt
      601 cagagggttt tgggaaccat ctttgaccat tgtctgccgt cactccttca gacactagga
      661 aaagggaaag tgagagcgtc tataggggga aaagtacttc ttttcttggc tttaatctct
      721 ctttaaagct tcatagatct acatttccag ctgagctact ggaactatgc agtgtcagat
      781 aaataccgaa gagagaggtt tcaagctgag cttttaaatc cccttatctg catgaactaa
      841 taatgcagat ttagcgctgt taaaaacaga gactgataag tcttttcctt taaagccttt
      901 aaactgctaa agagcattta acagcgatgc agttcaaacc cagtgaacaa tactgggaag
      961 gaaaacagtt taatgagcta aaccttcact gaatgaaaca gaaacacctt ctcacagttg
     1021 attcaggtca ctgggggagt aagtgaaa
//
LOCUS       KCKM01002772             713 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43491apa ultra-conserved element locus
            uce-4927, sequence.
ACCESSION   KCKM01002772
VERSION     KCKM01002772.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 713)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 713)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..713
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43491apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>713
                     /note="ultra-conserved element locus uce-4927"
BASE COUNT          252 a          137 c          133 g          191 t
ORIGIN      
        1 atctgaagca tggagcatct gagctgcctc ttcagttgct aaaattgagc aaaaggcagc
       61 acaaaaagat gaggaaaaat tcttcgaaac agaagcaaaa tagcaaattc tcatagatca
      121 gctattctaa ggagagaaat ctctaaaaac ttgcttaaaa ataaaaaatt attattcctt
      181 gtgagacata ctcagaacaa actagttcat taaagtcata tcagcacttg taattggccc
      241 ttgttggcca atagaaggag acatttgcaa cttttcccag gaaattatat tctaaatcct
      301 tcatgaggtg gaccttgtcc ttttctgagg caacttgata gcagtcttta gtattcactg
      361 gcataattag gactgcagtt aatttcatta aattctcttg ctgctaaatg aagcagatta
      421 tgagacatct tttattgcaa ggcatgaaat tacagcctgt cagctgccaa tggtagagta
      481 aaactaatga attacagggt aaataacacc agaattaacc agccaattta acatagcaga
      541 gaacaaagtc atttttactt agagctctgg cgaacaccac caccactggg atccctttca
      601 gctgcaaggg aaccaattca aggagcctca cgacgaaata accagggaaa agccatgtga
      661 ttgtgcagca atgttagaaa gccaacactg tcagtatgtt attagaaatc agt
//
LOCUS       KCKM01002773             920 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43507apa ultra-conserved element locus
            uce-7979, sequence.
ACCESSION   KCKM01002773
VERSION     KCKM01002773.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 920)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 920)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..920
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43507apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>920
                     /note="ultra-conserved element locus uce-7979"
BASE COUNT          252 a          210 c          229 g          229 t
ORIGIN      
        1 tgcccaggat ttgttcagct gcgggtgtcc atgaggatct ttctggctgc agaagcattg
       61 agacccaggc tggacccttc ccaacctggc atctccccaa actcctgctg tccaagttgg
      121 gtcgtcgggg tgccaggaat gaggagatca gcaaatcctt ctcgcaccac tcgtgggttt
      181 tcattccgtg agtggcatca ccatgcacgt ggggcacagg ctggatgcgt cctccgtcag
      241 aaaaataaca tatttttaag ggagtggatg cagataatgc agaagaaaat atttagagtg
      301 gagcattctg atgccggttt aatctagatt atctctgatt gcagcaagag atttgatcga
      361 catatttaac ctctatttct cactcttgtt ctgccctttt ttcccaacgt aaggccagca
      421 aagtaatttg gaagtcgaac ttcacctaag tgttaatgat gaagctctgg gaagtttcgc
      481 ccgtaatgag gcaccatgca ggaggaagta ccagttggga ttcctattgc agccatatgt
      541 gaggccaatg ttgcatgaat taacatacgg tgggtcaagt taacatatgt acagtgaaaa
      601 atgactaatg acttatcaca ctgatgttat ttttggacct tcttcctcgt acgcaacctt
      661 tcccaagtaa aagcggttta tgcctcgacc gtcccggttc cccgtgaaga aagaggaaag
      721 tgaaaccata tgtttagcaa agggaggaag gcgagccaga aaggcaatgc cggggaaaaa
      781 aaaaaaaaaa aaataaaaat ctggggcaac gccatccttg ctgcagccaa aggggatgaa
      841 tgcccagcga tgtcccagca tgcttccgaa accatcaccg gctgcgttta gtgccctcgg
      901 tgccactgag atggctgcag
//
LOCUS       KCKM01002774             215 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43523apa ultra-conserved element locus
            uce-4450, sequence.
ACCESSION   KCKM01002774
VERSION     KCKM01002774.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 215)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 215)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43523apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>215
                     /note="ultra-conserved element locus uce-4450"
BASE COUNT           62 a           28 c           47 g           78 t
ORIGIN      
        1 aatcaaacca gagctattta gtgtatagtc tagtcttgct gtgactaata ggatgattgg
       61 ttgtatagct tctttatggt tgttcattat atcaccctta cataaagtaa tttaatttca
      121 gtgggataat tagggtattt ctaatctaac tgatagtctg aatgaaatga gattctcaga
      181 gggagatttg tgtaccagga gattggtgac cttcg
//
LOCUS       KCKM01002775             662 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43538apa ultra-conserved element locus
            uce-5107, sequence.
ACCESSION   KCKM01002775
VERSION     KCKM01002775.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 662)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 662)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..662
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43538apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>662
                     /note="ultra-conserved element locus uce-5107"
BASE COUNT          229 a          120 c          134 g          179 t
ORIGIN      
        1 tgacgacaga acatataaat aaactcaaat aattaaactt gtgggcatca ggccagcatg
       61 aagatgaaaa ggacagtcct tcatagcagt gatgctctgc aacctaacct gagctgcccg
      121 cgctcgagcc tcacccagct ccctggccta gctctgtcaa accacacatt aaggaggaag
      181 aaagattcac tgaagaattt ctaaaaaacc catcaggtgt gtcaaatctt tgacattcag
      241 aaaccatttg gggaaagcag cacacgctga cttaagcact aaagtatgga tgctttaatt
      301 aatccggggt gattttaatt gctttagtta agtgggaatc gggttaaaaa tgatgcagag
      361 catgctgggg tgtgttaaaa acatgacata tgagttggat gaatcgataa attaaaagtg
      421 cacagatgtt ttaattaaac ccaggaaagt taacgaagat cactagagac ttttaagcct
      481 atgattaatt caattcattt aaaatacctg tagagatatg gggatgcctc cattttggga
      541 gttatagaag ttctcaatca ataactactt aagctgttct acaaaaaaaa tggcaggatt
      601 tttatagaag tgactgaaca gcattaattg cacaatgaat atttgcattc ttctgaacac
      661 tc
//
LOCUS       KCKM01002776            1008 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43553apa ultra-conserved element locus
            uce-3383, sequence.
ACCESSION   KCKM01002776
VERSION     KCKM01002776.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1008)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1008)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1008
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43553apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1008
                     /note="ultra-conserved element locus uce-3383"
BASE COUNT          323 a          178 c          181 g          326 t
ORIGIN      
        1 taatttactg tcacagaatg gggcatttct tactggatat gatggatccc ttccagttgt
       61 tttcgtgata cactgtattt gtgaatctag ataacagttt ctgaagtccc tgatgattct
      121 ctgaaatact tagcaggaaa aaaaagagga cagaagagat atggacatca taaaaaattg
      181 tgaaaacaaa aaagatgaga acaagaaaac tgggagtaaa ggaagcaggt tgcatttgca
      241 ttgtgaatag atcagagtgt tgttgagtaa taacatactt aagtactttt tataatctat
      301 gactgtaatt tccaatttcc aacttctttt gtttttcatg aatatagtat gactccatct
      361 gtcaaagtgg aaaagattca tccaaagata gatggtgccc aactgaaagc tgctcttggt
      421 ccaacttgtt ctactactgt gagttcctca ataaagactg gccttaattg tccctcaata
      481 ccaaagccac ccttgccttc ccctggacag atactgaatg gtaaaggtct tctctctgtg
      541 cctccatttt tggaaaagaa acctgaagaa aatacaaata ataggaaatt tttacataaa
      601 agattgtcag gtaactcttt ttaattattg tttgctatat ttctggtagt agtgtattat
      661 agaaatatgt ttcagaggta aattaagcac ttagaacact ataacttgta actaggtatg
      721 ctttatacgt tagaatttgg atctgtaaca tgacatgctc ttaaagactg caaaccattt
      781 gaaatggggc tgttgctttc agcacccata caggctgcac agccctgcca gttcttgcag
      841 cctaaaacct gcactcttct attacctttc aagatttttc tttaatttct tttgttatgg
      901 aaggtgcaaa tgtatataga aagcggaaca actagcactt cataaactca aagatgtaaa
      961 cttagtctgc tcttcacact ttttgaacac actaactttg agtgttag
//
LOCUS       KCKM01002777             815 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43567apa ultra-conserved element locus
            uce-6123, sequence.
ACCESSION   KCKM01002777
VERSION     KCKM01002777.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 815)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 815)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..815
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43567apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>815
                     /note="ultra-conserved element locus uce-6123"
BASE COUNT          242 a          210 c          250 g          113 t
ORIGIN      
        1 gagggcacaa cacaagtgcg ggaaaacgca cgacagaagg atcgcaaccg gaaggcgtgg
       61 agaaaaggtg cagggcgctc gcccacccac ccacaccctt gtgccgtggg aaaatggttg
      121 ccaccaatga ttagagagcc aagcaagcta aagccatcct ccctgaaatg cctccagcgc
      181 cagagctttg ccgccaccag tgctgctcct gcaggacctg cagcccacca gtgaccggga
      241 ggggagggtg agatttgcgt gagcggcaaa agcaagcgga ctggtttggg gagcgggagg
      301 gaagagagtc tacaagcaca ggacacaaac gtacaagctg ggtggtttgt accggccttt
      361 cttgcgcttt ctcttttgac ccttcccctt tcctcgcttt gattttctgg aagaaaaaca
      421 aaaaaaaaca gaaagaaaga aagagagaag gaaagaaagg gagaaagagg gagaaaatgg
      481 aagaaaacgc aaggaagaag agggaaaaaa acaaaacagc catgtgcttt gctgggaggg
      541 gggaagtaca cgaggcagga ccagagggca agtccccagg ctgaagcaca gatctccacc
      601 tcgcacacac attcactggc cctcctgcac tcctgccagc accgcagcca gcctgcccac
      661 agccaagcca aaaccagggc actcagcaga ggtggatctg ctggagcctc agaggggcac
      721 ctgcccgctt gtgagggggg cagcaggaca ggagatgagg gggaaggcac ggaaagcttc
      781 gtgaaagcat cacgcgaccg cagtgagtgc agaca
//
LOCUS       KCKM01002778             938 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43582apa ultra-conserved element locus
            uce-6818, sequence.
ACCESSION   KCKM01002778
VERSION     KCKM01002778.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 938)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 938)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..938
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43582apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>938
                     /note="ultra-conserved element locus uce-6818"
BASE COUNT          273 a          155 c          194 g          316 t
ORIGIN      
        1 atgacttact atttttatgg tgttattttg gcaattgtcc ttgtcacaat gagtattaga
       61 tgagtgacat gacatttgta ggactgctaa gttatttaat gcaaacaccg ttttataacc
      121 gatggcactt taatggtaag tatgataaca cagtgcatac tgaaccgaga ggagagtaaa
      181 ctttaaaggc tagagcctta gctttgctga gtttacagat tgcattccac acaatactga
      241 acaggtagag gggaaaaaaa aagacccaaa caccaaagtg taggaaaaca gctaattata
      301 gtaattgcag ctggtttcaa agtacttcta acagtttgtg cataatgctt acttgaaagc
      361 atcaaatggg cgctagttgt gaaatagaac acctgtttgt tgttgagcat gtgtttatgc
      421 agatgatttt tgttgtcaaa gcaccttgat gtagagtagt cctgtttaca tttacattct
      481 ccccaaagga ttaacagtgt tctctcaata aatttgcagt ctattctcct ctcaaaggct
      541 gctgtttgga gggtggtgtg aacgaggcaa caagtgcttg ctaatcactt gaatatacat
      601 aattagcgac agtctggtgc actggagtct ttgtacaacc ataacaatac tgattggcag
      661 cagcagataa caatagtcgt ggcaaggtgc tatttgttga atatttgaag gtgtttttct
      721 tttatatttg cagtaggcat tttgagttaa ttatgctatt attctggaac actcttacta
      781 tttcgtgtta atgtcagagt tgaagattgg tcatgtggcc agctgtacac aaaggagtaa
      841 gacctttaat aaatcctttg cttcttttga gactaagctg gattcttttt ttcttccttc
      901 ataattttat gagactaagc tggattccat ttttcccc
//
LOCUS       KCKM01002779             969 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43597apa ultra-conserved element locus
            uce-772, sequence.
ACCESSION   KCKM01002779
VERSION     KCKM01002779.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 969)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 969)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..969
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43597apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>969
                     /note="ultra-conserved element locus uce-772"
BASE COUNT          307 a          177 c          161 g          324 t
ORIGIN      
        1 caaaaccagc ttcctttagc ttagcaataa aagcaatttt acttagctca tgtcaaagtt
       61 tatcgtgtga ctttaaagca tctgttaact ttaacagcat aaatgaaatc atcactgaat
      121 atggcctcac aaggcaattt tttttttaat gtttaaacca ttcttgtcta tacccccttg
      181 tcattaactg gtaaatcagt aatttatttc ctattagaat ttatatagtt tgcagcaatt
      241 aagaagaaaa gcataattgc tgacaaaccc agggcactat ttaaatcact tccttgttga
      301 caacatattt ctccttccta aaactgaatg tcactgaaat ctgatttgta cagaaccctt
      361 gtggactcat cattcaaatg tactgcacct gtcacctgtg tgctagcatt ctgctaagga
      421 tcaatttaca taacctcatt taatggttca taaatcatac ccattaagcc cagctaacag
      481 gaaccaaggg ttctaattta tgctgccttt catagcagaa aattgggagg ctggagcctg
      541 tggataaaga acccaggtct tgcctttgat tgttgattgt gatggtaaat gtatggatga
      601 tgagaacaga ttttcacttt attgatttcc tgccaaagca cagcatgctt tattgtgaaa
      661 gggggccttt tggcagcagt gctaaaagtg gcagttgttt aggagccctt tgccaagatg
      721 acatctaaga caataccgag tggtaaatac taaaataata tcaagctgaa atgttaattt
      781 tttaaaagaa acatccccaa aggttcataa aatcaatgat gttttctacc ccagagtacc
      841 tcactactaa acatgaagcc aggtgattac tgtggggtat taattttttt taaatctatt
      901 tttcttaaat tctttattct attataaatt attcatggta tttcagtcaa agtaatgcag
      961 atgtttgaa
//
LOCUS       KCKM01002780             236 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43613apa ultra-conserved element locus
            uce-7537, sequence.
ACCESSION   KCKM01002780
VERSION     KCKM01002780.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 236)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 236)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43613apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>236
                     /note="ultra-conserved element locus uce-7537"
BASE COUNT           83 a           44 c           54 g           55 t
ORIGIN      
        1 caatcataaa tcggtattat acagtatact cccaaaggcc ataattactt ccagaagcag
       61 aaatttgaat gacccagata attagttcag tgcagctggt ccaaaaatta tttacataaa
      121 agccagtttt acttgagggg gaagaaaaac aaccctgcta ctgaaagaaa atgacctagt
      181 tagcttcatg cagtgagtgt gaggaggcag agcgtgagtg gcaacaggat ggcccg
//
LOCUS       KCKM01002781             737 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43628apa ultra-conserved element locus
            uce-4591, sequence.
ACCESSION   KCKM01002781
VERSION     KCKM01002781.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 737)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 737)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..737
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43628apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>737
                     /note="ultra-conserved element locus uce-4591"
BASE COUNT          219 a          153 c          150 g          215 t
ORIGIN      
        1 ggggggagga ggcaggaaag agaggcaaac aataaaaaaa gcgcagacca aaccagtttg
       61 ccttctcctt ttgtgcagtg catgtaatga ctgaactttt gactttaaag tttttctctg
      121 gtgcagtact gtggaaaaag aaacaaataa acaaacaaca aaaaagatcc ccttggtgca
      181 aagacaggtc taaggcaata cctggtgaag ggattttttt ttggttgttg ttgtttactt
      241 gaagcagata aaacacccac cttaaacccg ccctctattc agttcagcag cacctccata
      301 ctccaataaa ccgttttcat tccatctggc gtgcgtttgc tctgaagaca ttttcctgtc
      361 aatctctcct gccacattaa aaatctgtca ttactattgc attgccgcct ggctcctgag
      421 atttgtctga ctgctttatt gctcctctct tttttctgct acagccgaga agcagaaata
      481 aaggtttgtt gttgaaacat ggccgcaagg aaagtaggag gcacacatct gtcaaggtat
      541 tacctttctt caaccaggga ttaaggtgtt ttactgctct cgctactgag cagtcacact
      601 gaataaattt tctcagtaga acataaaaat gaactcatac attttgaact gggtttcatt
      661 ctttcaagcc aacccatata attatgcaat ggcatcagtg tttaggggga aaaagaaaag
      721 tcagaaaggt ttgtgtg
//
LOCUS       KCKM01002782             826 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43643apa ultra-conserved element locus
            uce-2529, sequence.
ACCESSION   KCKM01002782
VERSION     KCKM01002782.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 826)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 826)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..826
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43643apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>826
                     /note="ultra-conserved element locus uce-2529"
BASE COUNT          283 a          132 c          174 g          237 t
ORIGIN      
        1 atggataaac agttctaaat tatgtgccga gttagactta ctcaacaata tcaataattg
       61 taatataaaa tgttgaggtt tttaaaataa aaataggaaa gatccaagaa attactcttg
      121 tgcaggcatg tttctttatg acccaatgtg caacattttt ataggctgta tgtctgaaag
      181 gaggtatata taatgatgtt taatgtgtag ttgagagcaa aattattaca gttttatata
      241 tagtgaagcc atataacaaa agagcagtag ctagtgtttg cccttatatg agatgcagtc
      301 ctataataga gagccttaaa gctagggttt actgtacttt gggaattaat cacataaact
      361 ataaattggg ttcaacaggc tggctgggta aataggcgca gctaatgagg acactatgag
      421 atcttataag agcgctgact gccccaggac aaaagtgccg agctgcacct gatggaaaac
      481 tagaagacat caaagcataa aggattagtg ctctcacagt gttgagaaat ggccaggggg
      541 agattcacca acttattacc cacatccaag ctaatcctgt tatctgcaaa atatgactgt
      601 gttcaggaac tgccaccacc taaacttgca ggagactaat tctgtgttta cacggacaaa
      661 agtgcgggga attttcatct gggcaaagaa tatgagagat gaaaattttt aagggtttcc
      721 tttgtaccaa atgcatgaag aaggggaaat ataaaattag ttctttaatg gctaatctgt
      781 atcctatacg ggtatcctac agaacagaat tccttctctg agaata
//
LOCUS       KCKM01002783            1167 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43658apa ultra-conserved element locus
            uce-4863, sequence.
ACCESSION   KCKM01002783
VERSION     KCKM01002783.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1167)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1167)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1167
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43658apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1167
                     /note="ultra-conserved element locus uce-4863"
BASE COUNT          300 a          236 c          211 g          420 t
ORIGIN      
        1 ttacctccaa actaacaagc atagcctcac atcaaattta aatgggtcag gaagcctttt
       61 tcaaaaagag cttaaaaaca aaaaactcaa tttaattgac gcgaggagca gtttcttagg
      121 tgcatattgt tttgctttat ttttttctca gtgtaactga ggctaatttt acaacatcaa
      181 ataacacttc gaaggactat ttaacatgtt ttgttttgtt tttcatttaa tattatagag
      241 ggaaggttgt aaatttcttt ttgttctttg atttgggtat tttttgttgg tttttcctta
      301 tttctagtgt ggaaaccaat atgttttaaa actaaagaat gggttaataa gcttgaaata
      361 gataactaca actgaaaact gcacattaag taaaagaaaa gaaatctcct attttgtctt
      421 tgttgccaga aatcacagtg tagtgtcaaa cactccaaat gactgtcaaa tataaattct
      481 tcttccactc catctttggc agctgtttgt taaggcatct aataacagat gtgagaactg
      541 taatgtgtac aatgtgtaag tgtccttggc tgtcagtccc attgcagttt caatgtgtgt
      601 tactatatgc agtatatact aagctaatgt agttgttttg tcctttgtct tctctgtgct
      661 ttatctctag tccggagtgg taaagtccca ttcctgcagt cctagtgaac cagtgattct
      721 tgggggttag tggtttttgt gtggtggcct tcctctgtaa cgtcacctta tgctgcttcc
      781 actgtctgta taccttttaa tttctgctgt tgctttgctg ttgtgtattc tcagacctct
      841 cttttcccct cccttccaca cttttccccc ctctctttct ctcgctctct cgttctctct
      901 tcttcactct cagagataaa agactcttaa ctagctcaag gttaatggag ccatttttcc
      961 cacagaggaa ttctgggtat gacttactct tccagtgtac cccacaatgc actacggagt
     1021 aatgctcaga tatattaagc aaattgacgc catatagcct cagttgttaa cattcccaga
     1081 gtcccttgtg ctcgaactgt aagcagaggg tgcatttctt tggttttctc ccaggtaggc
     1141 tggcggagta acacgtagag caattac
//
LOCUS       KCKM01002784            1017 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43674apa ultra-conserved element locus
            uce-1624, sequence.
ACCESSION   KCKM01002784
VERSION     KCKM01002784.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1017)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1017)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1017
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43674apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1017
                     /note="ultra-conserved element locus uce-1624"
BASE COUNT          302 a          211 c          152 g          352 t
ORIGIN      
        1 aagagtccgg tccgcacatt taattcaccc ttgtttcttt gactatcatt tgtttatcag
       61 gcaaagactg gtctagagct taatcaaaat gaagaaaatg aaattcccac taattaggga
      121 gatctcagca cttgctagat cttttcaaag attaagaggt taatcatttg cagtcagacg
      181 gtaagaaatg aacctcttgt ctcttccttc atcctctatg cagttcctcc atttcaacat
      241 ccttgttact aaatctgaga caatgtgtaa ttatacagaa ggaaatctct ctggggtata
      301 gctgaagttg cttaaattgt gctgatttac aaagatgaag gatttttatt tttttccccc
      361 aactagaaaa aaaaattacc tttttttcat aatggcaaac aacctcctgc aaagtcaact
      421 ccttttctga aagtcattgc tagttttata atttctgagt cattagataa cagatagaac
      481 tccacactta gtggtttcaa atgtttatgg tctgcaattc attcttaatg agctctctcc
      541 atgtctttat tcttcttcac accctcctgc tgggaaatgt cttactctgc cttggctttt
      601 gttaatgatt ccacaatcat ttcagagcca tttcttctgc cttatgtaat tctgacactg
      661 cataagagcc tggttctgca gcctcacagt tggaaatgta acctttaatg tattaatttc
      721 tcttgctcaa aacaatttaa cctctgtctt ggttttgtga ttgctaagtg ttccaattaa
      781 atgcctcttt cattttttgt cctggagggc ttgatcttac cagtattatg tttaacatac
      841 cctacctagc aaatgatgag cactccaggg tcccctcaag tgttctttat caatctatta
      901 tctatctcat gagtgtctgt cacattttca aaacaacaac aacagaagag attaattaaa
      961 ctagttttaa acactaaata acaaaaccca ctacaagtgg aaacaaataa ttacaaa
//
LOCUS       KCKM01002785             987 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43689apa ultra-conserved element locus
            uce-6823, sequence.
ACCESSION   KCKM01002785
VERSION     KCKM01002785.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 987)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 987)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..987
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43689apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>987
                     /note="ultra-conserved element locus uce-6823"
BASE COUNT          327 a          162 c          147 g          351 t
ORIGIN      
        1 taatgacagt gttacagatt caggaaaggt ttcagatgca aacgcggtag gctacacagc
       61 taagacatac atatatcctt tatttaggat gacaaaaatc ttaaacatat ctttcagcac
      121 tgtctcatac aaacagtaca tcactagcct ggacaccaag ttatttaaag ctattattta
      181 gtaccataat aagtagcaat ttaaatacaa ggtaaaatca ttacattgtc ttgtttacta
      241 ctgatgttaa tgtcaagctg acgtgtaatg ctccagaaaa ggcagcctat gatttgttat
      301 cattaaactg tcagttctgt catgtgttag acatagattc atactccact tctttcagca
      361 tatcacttta ttttctatca gtcaaaaacc aaagtgtttt aattgtgtct ctgctatttt
      421 tctattaact gtttcatgca ttttttctct ggccttttaa ttgcagttta atagtggtca
      481 ttaacacatt aaggggtgtt agaagaacat ttgaagtcct cttgacttct accaaagttg
      541 acacttcaat gctagagtaa tttcagctat tcatttattt aatagtgacc tatgcaaatg
      601 tggaaccatg tcattttaca aattgactgt aataattaac tagaaaggca gagtaaaatg
      661 aaacaggtta taattagaat aaaactgcta cagtattacg tcagctagaa tctcaaatga
      721 ttaaattggt ttcaattatt aagaatcagt ttaatgtacc cactgttctg attttttaca
      781 tttctctttt ttgtgtgcat tagatgtcac ctcatacaat ttatgcattt tattcatctt
      841 ggtaaaacag gcattacaaa agtttaatta agtagtaaaa gacttcatat tattccgttg
      901 aattctaaat tagttgcaga aagaaatgat agtgcatagt acataccatt catacacatt
      961 tcaattagat gcatctattg ttagcta
//
LOCUS       KCKM01002786             986 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43705apa ultra-conserved element locus
            uce-3609, sequence.
ACCESSION   KCKM01002786
VERSION     KCKM01002786.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 986)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 986)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..986
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43705apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>986
                     /note="ultra-conserved element locus uce-3609"
BASE COUNT          359 a          178 c          192 g          257 t
ORIGIN      
        1 aatgctaatt atatattact aaagaataaa ggtagaaagg gaaatatgag cattaaaaga
       61 aagataaaca tcccaatgct gaatttaaaa ttaaaaaaaa acccaaccaa ctttaaatgt
      121 ctttgtagct cactgtcata aaccgaagac ataatgaagc ctgaattaaa aatgtcagtt
      181 tctgtgaatg ttgataactt ggttctttgt tgtacaagtc aaaatgtgtc tgtttgatgg
      241 gttaaaatga cagtctgcaa atgggagaag ctagagctaa aaaaagaaga cacttcccaa
      301 aagacttata aaaagtaggc ccgtaatgca gtactttaag gagaagacct gtagggtaga
      361 agagccagta tctttaggaa gtaaccaagc agcactaaaa ggcaatgtcc atggccaatc
      421 aaaactattt ctctagctgc tggggctctt gcatctctgt cttcacacta gactggaaac
      481 cctttgtact aattgccaga ctgtaccaga ttttctggtt cagttccatc ccataattga
      541 ccgacaatga tgggcaagga aggggaaaaa ttcaggctca ccactgcaag cagagggtca
      601 gaaatggttt catagggagc acatcactgc ttggcactaa atgcagggtt aagcaagcat
      661 catctgtact ttcttctaat tcctaggtta aaagggggat gggaaaaaca ttcacactgt
      721 agcagggtaa agagaagatt tggaaagctg gcataaaaat cttccacaga gacaagatat
      781 tgcccgcagg atttttggaa gttagtctct aattgcaata tcagtacact acttacatta
      841 aaataaataa agcagccata aaattctgtt gctccataaa aaaaatcctc ccacacttac
      901 agtaagcaca aaagtacatg cctataaagt ttcttttcca aggaattaaa ataattcaca
      961 gtcttaggtg ctgaaaagat ccaagt
//
LOCUS       KCKM01002787             842 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43720apa ultra-conserved element locus
            uce-2442, sequence.
ACCESSION   KCKM01002787
VERSION     KCKM01002787.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 842)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 842)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..842
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43720apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>842
                     /note="ultra-conserved element locus uce-2442"
BASE COUNT          220 a          149 c          185 g          288 t
ORIGIN      
        1 catatttaga tgaatcttcc tgtttcggct tgtgcctttt ttgatgcgtt gtggataagt
       61 ctgagcaaga gaagtgggag aagcaagttg tgtggatgtt ttgagaagtt ttgaagtttt
      121 gtcttgagat ttgatgtttg gagtctgctc taagaaagta cttaattttt tttttcagga
      181 gtttgtggag aatagtagga aatctatgaa agaagctgtc cggggaggtg gagctgaggg
      241 cagagagcta aaaccaatgg taggtgcaga tgaggaggtg gcggtcctcc aagagtttca
      301 cttttacttc ttctccctct ttgtctttac tgactgcact tcttcaggag aagtttttgt
      361 tctctgtatc actcaagatg ttctgctttt tctgtttgtg agcttgccta tcacctggat
      421 ggcagagttt ttgtcacagc tgagaccatc tcctgtaaaa gtaagatgaa aggaactgtg
      481 tcatatgaaa caaatgcagt gtcatttcgt tagaattagt caagcatgct gtgtggtaca
      541 cacaaacagc cctagctgct gagtactctc aaaataagat gaaattcatt gggctatttt
      601 aactttaatc ctcttttcag acctgagctg aacaattttt gttcatctta cattcaccat
      661 aaaagcctga agaacactac tgagcacatc cattgttgca aagtaggacc aggcatttaa
      721 atctctcatc aaattatttt acatagtgcc aaggaattgg atacagtgat tcctttcaac
      781 ctgctcaaat gacatttctc ccagttgttt gtttttattg ccaactactt atgttgcttg
      841 tc
//
LOCUS       KCKM01002788             822 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43735apa ultra-conserved element locus
            uce-5215, sequence.
ACCESSION   KCKM01002788
VERSION     KCKM01002788.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 822)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 822)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..822
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43735apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>822
                     /note="ultra-conserved element locus uce-5215"
BASE COUNT          158 a          223 c          187 g          254 t
ORIGIN      
        1 cccgtcccaa tagggcagtt gagccctcca ctccaccccc cagtgggggc ctttcttttc
       61 ttccccacca gctttgagca gccctgtttc agattggcct ttttatgttt catataaaga
      121 atagttgttg gccaattcca tcttttcatc gctgctctcc aggcccgggt ccaagcggct
      181 tgtcagatgc tcattaactc cccctttggc tctttccagt gtgtctccta agctcattgt
      241 gccaagaact agcgcttctt tctctttaca cggctccctt tctctgctcc atcagggaga
      301 caaattactt tccaaaaggg atcgccaggg atggtttaat gagaatttct ctagggctgg
      361 ccgtggaaat caatgtagtt aacattcggt gcacttaatt ggacttttct cttctgcctc
      421 cttcaaaaaa actctgaagc tatcctgtta atctctcatt tgtaatcaat tgtgttgact
      481 aaacaaaagt ctaggtcgtc ctttcttcct gtcccagaca atcctttgtt gcctctaaat
      541 gcctcattct tgagtgctcc tggtcatgta gatgggtccg attgttgaca gttcattatt
      601 gcgcttttgt ccatttaatc tccctcgctg tgttttgcat gtgcatgcct taatgagctc
      661 cgttggcaat taacatgttt ctagcagcaa accggttgct cagacgtttg gagagcggag
      721 tgcagggaaa agggcaacgc agctgccttt gggttggtcg cttcccgctg cccggcggga
      781 cgcacctggg tgctgccggt cccggggagg cccgggccga gc
//
LOCUS       KCKM01002789            1071 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43751apa ultra-conserved element locus
            uce-603, sequence.
ACCESSION   KCKM01002789
VERSION     KCKM01002789.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1071)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1071)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1071
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43751apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1071
                     /note="ultra-conserved element locus uce-603"
BASE COUNT          290 a          206 c          254 g          321 t
ORIGIN      
        1 aattaattct gtaaagaatg ccatttggca gagcagaatt atgaggtttg catattgatg
       61 gtggcaggga aaaatatatc tgttttctat ttatatggta aaattaactt gtgttcttca
      121 gaaaatggca tatctcggag gtattgctct caaaatgatc tcggggtgga aagaaatcag
      181 taattacagc accaggcatt cagttctgtc ctaattttcc caccagtttt gcaatgtttc
      241 agctgcctca gagacttaaa gtactctcat taggtagctg cagaggctgc ctgcttgcct
      301 cctccatcgc tctctctcta gctttctctc tcactccccg tctcttgctc tcccactttt
      361 tcccccccct cctgccttgg gagtgactgt gaagatcatt tgctggcatg attggcaggt
      421 taggggattc aatcagatga gttcctctta gtgcgggtca aaaaggctag ttagcaggag
      481 ctgtcgaaaa atgccagcag cattcgaaat gggaaatgtc atgacttcga ggcagggggt
      541 gccacctgga acagaaagcc cccagctcat tagcaagtta caggatgcaa gcttaactgg
      601 agggagcaga ggaggaaaga taatacccaa aagggaaaat tattgtgaag tggaattgat
      661 ttcatgtata atttgtttat cactagaggg gacaaatgct gtcctcctga catgtgcgga
      721 ggagtgtgga ctatgaatga agcaacttag cataatctcc aggttgagct ctggatttaa
      781 agaatgccaa cttctttctt cccaactgtg gaaatgatca ggtcatgttg tattaattaa
      841 acctgacata ctctcaaatg gtttatctgg gcaatttcag caattgaaga gaacgtggta
      901 gatatgagcg cattcattat taacactggg cagtgttttg ttttctggat gcggtggggt
      961 tgggtttttt tgcaggctgc tgttgtaaaa agacatgttt ctgttgcaag ctgaattata
     1021 acagagctca ttttcgatgc ttagtcagac tgcataaaat cagaatgcag t
//
LOCUS       KCKM01002790             407 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43766apa ultra-conserved element locus
            uce-5576, sequence.
ACCESSION   KCKM01002790
VERSION     KCKM01002790.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 407)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 407)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43766apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>407
                     /note="ultra-conserved element locus uce-5576"
BASE COUNT          125 a           76 c           71 g          135 t
ORIGIN      
        1 cttacctcct ctattaccac ctgtttattc atcttcaatt tgccatttcc attgtgtatt
       61 tattaagatg atgaaaagaa ggaaacgtgg ctgttagcaa tttcagcaac cccgttgtgc
      121 tcacattatt caagaaacct aataatccac atgaactaat tctgacttac tgatggtctg
      181 cttcactaaa tcagggtgat tttttctagt gaataatgga cgatgtagtg tgccaatacc
      241 ttgagagcct ctctcagtct tgatctcatt ttaatttaca gggtaatact acaataatat
      301 cactaatgga aggtacatta aagggcatca agtagcatta actgtattaa attatggcac
      361 ttgtgttaat taactgctga agcaagatgg tcctaatggc tagaaag
//
LOCUS       KCKM01002791             451 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43782apa ultra-conserved element locus
            uce-5377, sequence.
ACCESSION   KCKM01002791
VERSION     KCKM01002791.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 451)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 451)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43782apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>451
                     /note="ultra-conserved element locus uce-5377"
BASE COUNT          119 a           87 c          125 g          120 t
ORIGIN      
        1 aaaaataata ataggggtaa taagagagga ggtaatggaa cgttctccaa ctgggcacat
       61 gtcagaagcc attatatgtg gtgcagattt gcataattca agaagcatca aattaaattt
      121 gcataattcc tttgattaca cttgttatta aatgtaagtg acattgattt acaaaatggc
      181 ccaatataag gttaatagca aatgtcacct tccagcaggg tgactagggt gcatgtgtgg
      241 tggtggtggt gatggaggag ggggagaggg gggcctgggg aggaaggcaa gcagacaatt
      301 gatttctgct cctctctctt ccttaaaggg ctcaggtctc ctttgcagag gagccctcgg
      361 ctctctgagg gctgcgtttg gctttcctgt ggacacagtg tcactaggag ctcctgccaa
      421 gtgacatcgg tgccgtgact ctgccacctc c
//
LOCUS       KCKM01002792             668 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43798apa ultra-conserved element locus
            uce-5677, sequence.
ACCESSION   KCKM01002792
VERSION     KCKM01002792.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 668)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 668)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43798apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>668
                     /note="ultra-conserved element locus uce-5677"
BASE COUNT          198 a          135 c          135 g          200 t
ORIGIN      
        1 ataagaaagg aactaagctg ctcctcagaa atctagacat tagcatactc gccctaatac
       61 tttaatcccc atcattgttt ataatcgggc tacacacaag gttacatgca gtgccgactg
      121 atttacgaat atatatatat atatttgttt taattgaaac ggcaacattt aggttccacc
      181 ttaacagtgc accttaaaag attatctcgg ttatttcaca ggcaccgagc cggcactaat
      241 agtccaaggc agatattgaa aagcagcaca gggccaggca gatctattag aaattcccat
      301 ccacgcgcct catacatatt gatttctgac accaagcagc agtgaaagcc cccgtgggaa
      361 taatatattt agcagggttc gctgcgagga ggtcacagag tgcatacaga ttagctacag
      421 aggaccaagg cactagtgtt ggagccaaat gctagatttt atatcatttt aatctgaact
      481 tttataatcc ttttagttct tctttctgtg gatggcatag gaaaggctgc tctgcacgta
      541 tcatgcatct tttttttttc tttattcctc ctataaatgt gcaaatgctg ttttaatggg
      601 gaagaatgta cccttagcat tagcaggaag aggcacgggg tttatatata ggtactgtgc
      661 gtgtatat
//
LOCUS       KCKM01002793            1000 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43814apa ultra-conserved element locus
            uce-5497, sequence.
ACCESSION   KCKM01002793
VERSION     KCKM01002793.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1000)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1000)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1000
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43814apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1000
                     /note="ultra-conserved element locus uce-5497"
BASE COUNT          253 a          208 c          210 g          329 t
ORIGIN      
        1 cacagaacat tttaattgct ttttcacctt gtatcattta aggaggctcc agattgcatc
       61 cctgaagcaa gatgtgagta tccaacctcc actcgctctt tctcctccca tttgggagcg
      121 cgtgcaactc cctcctctgc gacagaatta catctgggga tgagtttgcc tgactgcgct
      181 tgcttggaag gacccaaagt gcagtttcta tcacatctca tggctaccac cttcggccag
      241 ctttagtagt gattcttgca tggtcagcga attctttggg aggagagaat ccgcacttgg
      301 tgcgcctgca tattacaaag gatgttttcg gcagtgtgca gctgtagtcg gtggagctca
      361 gcttggcaat tttaatcccc cactgtctag tttagggctg cttgttatgc agccagcatt
      421 cactcaacat aatggtcgct acctgccaat gtgctttgag ggatattgtt agcattaaat
      481 ttgccattta cattttcatg tttgacataa ttgaggaatg aatgctctta tgaaaattaa
      541 acttgtggtc ctcctggact actgtaaccc tgttaaaatg taatgtgatt cttgatgcgc
      601 cttctttagg tttttattaa atagaatatc cgtatgacta attcccctgg cctaaatgta
      661 ggctaggaag gagcattatt gatagggctg agcacaaatg gccctccata ctcagcctct
      721 aatggcctaa taatgcatta tacttgaatc agaaatactt tgagttgtag tgcttattgc
      781 cattattgaa aacacctgga tgctccattc atcaaggtta catcaaaatg ggcccatttg
      841 tttattagtc tgtcagtaaa catctttatt tagttttgtg ttcctctgct ctcagtaaca
      901 ttggagagga caagaccatg tagtgtatct ttctgtggtt tgctgttatt agttttctct
      961 gaaaacgaaa gataatgaaa agtttggatg gcttcataaa
//
LOCUS       KCKM01002794             326 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43829apa ultra-conserved element locus
            uce-6437, sequence.
ACCESSION   KCKM01002794
VERSION     KCKM01002794.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 326)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 326)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43829apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>326
                     /note="ultra-conserved element locus uce-6437"
BASE COUNT          107 a           61 c           71 g           87 t
ORIGIN      
        1 agtgactggg atggggctaa aatttcccct tgaacacgat gtcaatatgt tggcgtgtct
       61 ccttgtatta agatgccatc caactgataa caagtcctgc tgtgttttac caacataaaa
      121 aattagactg gagaccaggg agcggcaggt ggcttttggc accaagaaat aatcacactt
      181 gatgtggaaa gtaaagtaaa aggagccatc tgttcaccgc aggaggacgt gaaaaatcac
      241 attaacatat tgtcactaac atcatgaaat acacagttaa taataaattt agttatcatg
      301 gcaagctgca ttggatgctt ccttag
//
LOCUS       KCKM01002795             720 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43845apa ultra-conserved element locus
            uce-4608, sequence.
ACCESSION   KCKM01002795
VERSION     KCKM01002795.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 720)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 720)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..720
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43845apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>720
                     /note="ultra-conserved element locus uce-4608"
BASE COUNT          200 a          153 c          136 g          231 t
ORIGIN      
        1 ttccctcctt tttttttttt tttgcacgca tttaattttg aaagctacca aggcatgaaa
       61 cagtaattca tagaggctcc gtttcaaatt acctttcttc attaaaaaat aaaataacca
      121 ggaggtctag cacattatgt cactaagtca cacagtaaga gggaccatca aagaatggtg
      181 ggaattatca cagcagcttg ctacttgtta gaagcattta cctcctgacc ctttcatttg
      241 cctactgcca ctttagttta agagtgacaa cactgtacag cactctgcac tttctgctcc
      301 ccctttccct tagcaccaga tgcctttgta aagcaggctg gtgaagcagc gaacaaaacc
      361 ttgtgggata agtctgacac tggaagttaa tgattatcag tcgaaacaaa acacttgttt
      421 acatgttgta gtcattagag gttccagtca gtcatacctc ggctgggatt cctgccaaat
      481 gttttgaggg ttctttcaca agctgtgcag ttttgtaaat acaaaagcac tcttattaag
      541 cctttttagt attagactgt gcaattaaga ttgcgggtaa ttaggttcct ttatttggag
      601 tagaatggtc caagatccac acgcaacttt cttagctaca ggataccact ggatctctgt
      661 ttgggagttc cattacagat caatgtctaa gagaaactct tctgtgttgc gcccattttt
//
LOCUS       KCKM01002796             947 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43861apa ultra-conserved element locus
            uce-2090, sequence.
ACCESSION   KCKM01002796
VERSION     KCKM01002796.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 947)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 947)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..947
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43861apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>947
                     /note="ultra-conserved element locus uce-2090"
BASE COUNT          260 a          204 c          203 g          280 t
ORIGIN      
        1 tgattttgct gaaacctact ttggaacgtt acagctcgga ttgatgttat ccaatgccat
       61 ttttatcagg gtttcactgt gcactacaga gtattcaagg gagtcactgc aggctgctgg
      121 tgcccatgat tgcctctgac atgtacagct gaaaggactc ttattccaag aatgatattc
      181 ttttttagac tgtattgagt tgggactgat tttgatagcc agtttcagtc aagaatcata
      241 aagttattgc acatttaaga ccgtcagtat gagaatcatt ttctgtctct ctccctcccc
      301 ctctctccat tctttcccct ccctttctct ctctcatcat ttcacaggac tgtaaggtta
      361 cagaaaggtc taatcaattg tcaaactctc ctttatctct gagaaggtgg taaaaaaatc
      421 taactgccct gctgtagggg gttcttctga ctacacagca ccctttttca catacaatgc
      481 taccatgatt aatgtcctcc cacctcagac cttgttaaaa cctgttcttt aaagcaggct
      541 ggtgcaccac agtgagagca agagcaaggt tgcataaatc aacgtgttct cacagccccc
      601 aggatatcca ttatagatgc cagctggatg actggaagat agagaaaaat gaatattgta
      661 tcctgtggcc ttttgcctct aatgaccact tttcaacatt tttgaaggca tgattaaatt
      721 ttgataactg gggaagtcac tctgagcagg ctgaaataga gataaattga ctgagggtct
      781 gacatcccag tggagagcag gcaactaatt agtgtgtgaa tcgcgctctg aaagagatgt
      841 aaaagggagg ctggtttaat cagaggagct gctgaggtac aggaatagtc agggataata
      901 gcggcctagg tagaaatcac aggctcaacg agcagctttt tctgtcc
//
LOCUS       KCKM01002797             751 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43877apa ultra-conserved element locus
            uce-6771, sequence.
ACCESSION   KCKM01002797
VERSION     KCKM01002797.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 751)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 751)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..751
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43877apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>751
                     /note="ultra-conserved element locus uce-6771"
BASE COUNT          178 a          192 c          138 g          243 t
ORIGIN      
        1 ttggtgatct tttcccagtg atcttttttt cccactactt tagcgggaag gtgaaaaatt
       61 ttttctagta cttacttttc taacattaaa gttttttaag acagcttgga aaggcttatg
      121 ctcataggac caaccagcag gtatttccct gcacctcctt tcctgtggag cgggaggcaa
      181 ggagctgcag ggcagactcg aaaaaactgt ctctgttcct cctcctccct tccctccctc
      241 cccacacttc tcttaatctg ctggtggctc ctaaaaggat taattagaaa gatgtgagca
      301 ggggttggaa cgtcaaaaaa caatcatcac tttcatatct gacccctatc accagctgca
      361 gaattaacaa attgaatgtc gtcagcaaac aggagttgca gatgatatga agttcattac
      421 tagcagtgca gggcttgttt tcaaagcccg gtttaaacaa ctcttgctga ttaaattcct
      481 ctcaggggct cctgccagat acgtttagaa aatacggaca tctaacaact ctctctttct
      541 ctccctgtct tgtctttttt ttttcccccc tctttttttt ttttttttct taacatgtgc
      601 caattatttg tctcctatct gcaggtactg gcaagtatca acgctctggc cccactgtct
      661 acagccttat ccatttggcg cctgctccag tcctctcaca ttactggcag cggagtctgt
      721 tttcagctgt gaaaagccct gagcataact c
//
LOCUS       KCKM01002798             389 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43891apa ultra-conserved element locus
            uce-2780, sequence.
ACCESSION   KCKM01002798
VERSION     KCKM01002798.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 389)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 389)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43891apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>389
                     /note="ultra-conserved element locus uce-2780"
BASE COUNT          128 a           69 c           70 g          122 t
ORIGIN      
        1 aagcctgaga aaagttccac aggaaagatg cactatttaa cggaattcaa tctgtcccaa
       61 tagatttgaa tcactaacat aaatgtatga atgtagattg tatctctgta atgaggcctg
      121 aatcattctc agttacttca aaggactgaa attcaacctt cctttttagc agcaacaatc
      181 agaccttaat gggttccttt attaattgtt ccattgctaa gcttgaaaag cagttacctt
      241 cagtacaggt cctagactag aaatggtacc tgctgcttct gaaacagtat ttctgttttg
      301 ccttttaccg ttctaagatt ctgtgaaagg taaaatgagt tgcagtttag aaaagaattg
      361 cgttgattca tacagaatga aacaaagaa
//
LOCUS       KCKM01002799             848 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43905apa ultra-conserved element locus
            uce-4224, sequence.
ACCESSION   KCKM01002799
VERSION     KCKM01002799.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 848)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 848)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..848
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43905apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>848
                     /note="ultra-conserved element locus uce-4224"
BASE COUNT          192 a          249 c          246 g          161 t
ORIGIN      
        1 gaaaagcttt tctgaaaggc ctgaagcaac atgaacatcc tccactgatc tgaccccaga
       61 cctgctctcc caactggcac tggtcccagc tctcttggct ggggagcaaa ggtgggcgaa
      121 gcatctgcag ggcttctccg agcaggaagg ggggcagcag ggtgagctgc tcggagggcc
      181 tgtggtctgg gtggcagcac agagaggtgc cggaggagta tgccatgggc caggggccag
      241 ccaggcaccc tctcactctc tctatttcct ctctgtgcct ctctgccggt cgacttgcta
      301 catacctcct ttcctacata ttttcttgtt gggctttcgg gtgcattcct tggaaatccg
      361 ttttactgta aaatgaataa aagactacaa aataacagga ggctccagtg gcgggagtgg
      421 gcatgcaatc acaaccacac tgccatcctc ccaccacccc cggaaccgca ggagtgggga
      481 gggagcattg ccgtgggagg aaaactctgg gtcagccgtg ctgggcggga aggaaggcat
      541 gatgtatccc aaggtcaaag gccccaggga cagaggagtg gagccagacg gcctcaaaga
      601 agccaccagt ccactccact gcacccagca gacccactga gggtaccttc caacctgctg
      661 aaaaaccccg ggggctcccg ttgcagtgag gctggggtgg aggcatgggc agccactgcc
      721 tccttcgccc tctacttaca gttcaggtgg gatcccctac aaaggaaaag gttagacaag
      781 gaggcaccca gcgctgctca gcctcactcc aacgggacca tgttctgtgg gttcccagca
      841 ccccaagc
//
LOCUS       KCKM01002800            1155 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43921apa ultra-conserved element locus
            uce-2415, sequence.
ACCESSION   KCKM01002800
VERSION     KCKM01002800.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1155)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1155)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1155
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43921apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1155
                     /note="ultra-conserved element locus uce-2415"
BASE COUNT          338 a          274 c          234 g          309 t
ORIGIN      
        1 ctctactttc agctgtatta cagtaaagga catatatttt taatccattt gatattgctc
       61 tgaaagctat ccagccaaat ccatgtcaac cactgctgga tatgctttta ccagaataaa
      121 aggccttctg gcctgatcca aaaccaacac tggcagagac cacagtgttc cttgatagct
      181 gttttacatc atacctatgt cttcagtcct aatatatttt tagcagacac ttaagtggaa
      241 gcagctcaga tgactgtttg acactgacaa catgctgatg atcaaagtgt cctccctgtc
      301 aagctaggaa gaagacaatg tcttctcaat cttgcactat acaaactgca gagacgaggt
      361 atatgaaaac cttaaattgt aagtagttaa gtgcagatat acaagacctt taggaggaat
      421 cctgagatgg agcaggagga tccttattct caggctctgg aggaggagct ggcacgcttt
      481 cctctttctt ttgtgcagcc aaaaattcat gaatcgccct ctctatctgg ggcctgaaga
      541 tgtggtttag ttttggatcc accacctgag aaataattct gtccactcca gcttccagca
      601 ttcctgacct tgaacaaaga caaaggagtc attcagctca gctgaaaaac ttctccccaa
      661 tctcctccag taattctcca gagccctcct gtcaactgca attagcatta acatggtgag
      721 aactgcagcc cactcagtgg atccttaaca cggagttgtt tcagtcacct atatcccctc
      781 acccccctct cgcttctccc tacagaatta acaactgaca tctggtctcc caggtacttg
      841 gacaagagcc actgtaatag ggctcatgtg gaaatgaggt caacatgaaa gcaaacaaac
      901 acattttggc acaaacaagg gaaacaagct attctgagga ggagggcagg tgagagcaca
      961 gtcttttttt tggctgactg gagggggaag aggcctgccc cctaataaca tcactgtcac
     1021 ttgctccttg taactggtag tctagacaga tgggtattaa ttataaaaac aagcacatgt
     1081 aacacacagc aaagtttctg gaactgaaca ctagtagttg aagtgactta ctacttcagg
     1141 ggctgtgtca gactc
//
LOCUS       KCKM01002801             618 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43937apa ultra-conserved element locus
            uce-5568, sequence.
ACCESSION   KCKM01002801
VERSION     KCKM01002801.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 618)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 618)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..618
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43937apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>618
                     /note="ultra-conserved element locus uce-5568"
BASE COUNT          133 a          204 c          172 g          109 t
ORIGIN      
        1 gctttcccag gtgtgagaat gggttcacag aaagttcaat tgttcacagc gaaattggaa
       61 aatgaaaagg agcgagaaag aaggggtgtc tccccaccac acatgcgtgc ttctcccccc
      121 tcgccccacg agtgtgcaga ccgtacccca tgcacatcgg caatggaccc ggcgaggctc
      181 tcggcgcagc atgcactcgc ggaaggggga agggagggca ggggaagggg atgccttcgc
      241 acgttctgat catcaccata aagagttaaa gagagagtga aatggctaac gtacacacac
      301 cccgctccat accggagaag agtctcccag ctgaggttta tgctctgtga ggaccaggct
      361 gaaactgacc gcccccacgg ccacgctgga cacccctaac cctatctcca gcacggagag
      421 caccaggagg ctcccgatga tctggctgct ggtgcacatc ctccctcggt catccttcct
      481 tcccgatcag ccggggaaaa cgcgcatcct cctccttctc ctccggcgct cccgcggccc
      541 taagtcgccc ccaaactttt ttcttccttc gccggcagcc ggggcggagc ggcgcatccg
      601 cggccgccgg gcgctgcc
//
LOCUS       KCKM01002802             921 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43953apa ultra-conserved element locus
            uce-4976, sequence.
ACCESSION   KCKM01002802
VERSION     KCKM01002802.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 921)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 921)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..921
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43953apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>921
                     /note="ultra-conserved element locus uce-4976"
BASE COUNT          294 a          198 c          232 g          197 t
ORIGIN      
        1 gagataatga aagtattaat ttgtaaattc tgtgttaccc taacaggctt tctgacaagg
       61 catggggtag tgcaagcaag ggcttcatac cctccaatgg ctttctgggg agtttttaaa
      121 aaaaaataga aattctattt tagttgttat atatgcccag tccttcctct tgcctgggtg
      181 aaacacgtta cgtgaaggtt gtaggaaggg gctggtagtc aggactgcag gatgtggttg
      241 tccagcaact gggaggttga ggctgagtgg taacaccatt aatttacttt tctgttttct
      301 gtttccttcc ttctgctccc cctgcaacac tcccggcatc acaggtttct aaagtcaacg
      361 ggatcactcg aatgtcatct ccgagtgcga atgcagccag tgccaaaaag atgagagaag
      421 tcagaccttc accgtccaaa actgtgaagt acactgcaac agtgacaaag ggaactgtca
      481 catacaccaa agccaagaaa gaactggtca aggaaaccaa actaaatcac cacaaaccca
      541 gttcacctgt caaccacaca atctcaggga aaacagaaag tagcaatgca aaaacccgca
      601 aacaggtgct atcccttggg gcatccaagt ctaacaatac cgctgttaat ggtgtaaaag
      661 tcaatggcaa gttgaaccaa aagacatgca ctaaggaggt ggggagacag ttgagggagg
      721 ggctgcgcaa ttcgaagagg aggctggaag agacgagtca cgtggacaaa atacagtcgc
      781 ccaccaagag gatgaaaggg gccgtcagct tggcagaagc tgccagcaag aaggcagcca
      841 tcgaaaagcc tttgctgaat ggacacctta aaaaggaagt gccagagaag agtttggaaa
      901 ggaataggcc gaaaagagcc a
//
LOCUS       KCKM01002803             358 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43969apa ultra-conserved element locus
            uce-3497, sequence.
ACCESSION   KCKM01002803
VERSION     KCKM01002803.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 358)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 358)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43969apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>358
                     /note="ultra-conserved element locus uce-3497"
BASE COUNT          117 a           66 c           66 g          109 t
ORIGIN      
        1 ttctttttaa aaacctttta aaaatggtaa ctgcatcctg ctcttgtaga tgtattactt
       61 atgacatccc agttttcatc cgttcatgat tttacattag agttaaatct ctgcagcttg
      121 aatctcacgg ctgagttagc cagagcccat aaaatattga aacctttaga gcagcagcca
      181 gccaggttga gagaagttca tgtccaaagc tgagctttag attctgagac atcccaattg
      241 gagtgtagta cagaaaaaag cactgataaa attttcatta aaatgagcta aggatattgc
      301 tagcatgctt cccagcatct atatgaaaac ttaatctgag ctaatggaaa ggatatga
//
LOCUS       KCKM01002804             956 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 43984apa ultra-conserved element locus
            uce-5186, sequence.
ACCESSION   KCKM01002804
VERSION     KCKM01002804.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 956)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 956)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..956
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43984apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>956
                     /note="ultra-conserved element locus uce-5186"
BASE COUNT          316 a          197 c          192 g          251 t
ORIGIN      
        1 aagcctctaa cacaccaagc cctcatttct gaaaggcagg atccactgtg gttgcatgct
       61 tttaccgctg cagtgtggtg gacagcaaga tgcaaaacag ccagaccagg ttttgcacta
      121 cccaaagtac acacacctac agaagagacc aaatatttgg aagttcaaaa tagcaagagt
      181 ccaagcaatg aggccaccaa gaagggaaag cagaagactt cccgtggcaa gtaataaaaa
      241 aaagcgtcac tgtagcatat attatacctt caacatactt catgctctat tctctgtgga
      301 gggcttttca acaccgaaac gggggacaag gtgaagcgaa gggagtttaa agtgcaagct
      361 gcactctctg ctccaaaaag cacactatgc tgattcaaaa aaaacatttt caaaaatgcc
      421 tgtgggtaaa tttgagctgc ccacagctcc ccaggggcag tcgaacttgc tgtcgagcca
      481 tttatgtgga tttcagtcaa attctaattt tagtgttcat taaacatggg taattcccaa
      541 gtcaatccct gcatcaccta gtatacataa tacctctaca atataggtca tcctagctta
      601 gaaaacatat acagacatca aagtgcaacc atttcattat aagtattaac tttataaata
      661 attatgaact acttaattct ttacaagatg ctgtataatc acaaatgttt aaaaagcatt
      721 acaataggaa gaggggtgga tggttatggt atatgagcat atatatgtat gtaacccacc
      781 aacatacatg tattggagaa agaagagagg tctaaatatg ggtgtgtctg tctacttgag
      841 gcagaaaaaa ttgggatgtt tccctgaaac gcagtctatc tttgctttaa ccagaagaaa
      901 gcctctaagc tgctgtccta acgggtgttc tcagctgttc tctacatctg tgcagg
//
LOCUS       KCKM01002805             592 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44000apa ultra-conserved element locus
            uce-4287, sequence.
ACCESSION   KCKM01002805
VERSION     KCKM01002805.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 592)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 592)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..592
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44000apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>592
                     /note="ultra-conserved element locus uce-4287"
BASE COUNT          190 a          105 c           87 g          210 t
ORIGIN      
        1 aaatgctttt gatttattgc tgtatatacc acagatccgt atcacttatt cttacattat
       61 tttattcaaa aacttgtttg aaccatgagt tggcatgttg cggaatactg aaaaggcatt
      121 aatcaaccca aataaacaag tacatagatc tatctaacaa ctatgaagta gttaataaat
      181 ttttagcaat tttattatag aaaaaaggtc taaaagagta gtgcttaatt atctggactc
      241 ctctgtgctg ggctctcttt tgattgtatt aatgaagcag ctggcccatt gtttctcttt
      301 aattcctcta ttgttttaag aatatgtcac agctctttat tcttttatca ggtgctgtgc
      361 aggaggatcc acacaatacc tcatattcct actgtatttg ccaatgcaca aagaaacctc
      421 caaagcattt ttcaaagaag gggcacacat aatttataag ttcccttcct tgtaccactc
      481 tactgtcaaa aatttcaaca gtattggatt tgaattaatt ataatttttt attaaacaat
      541 gtggctacat atagatatac gtactttgtt cacgtcaaaa attagagatc cg
//
LOCUS       KCKM01002806             614 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44015apa ultra-conserved element locus
            uce-6137, sequence.
ACCESSION   KCKM01002806
VERSION     KCKM01002806.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 614)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 614)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..614
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44015apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>614
                     /note="ultra-conserved element locus uce-6137"
BASE COUNT          167 a          141 c          162 g          144 t
ORIGIN      
        1 cgttagcggc ggcgggagac acagccccaa caccgacctg gtttgcttgc cgagccagag
       61 caaagagaaa ccttcacgta aatcatttcc aaccattaaa atggctccat tgtcattata
      121 gccgagagat tgaattcgcc tcatcaaagc ggcgtgtgac aggtgactca ataggctggt
      181 gccaagcgtg gaggcaagga gattagcagg gcactgatat cattatttcc gcctatcaca
      241 gattcggcag ggaggcaatt gtaatttctg ggcttattag tctgcattcg cagggaaaaa
      301 aaaaaaggtg ataaacctca gtgtgacagc caggcatttg tgcagcaagt gctgtcacag
      361 tgacacttgg aaaatgccaa tgtggatacg tcctcgtaat cccccctaat agaggttaaa
      421 gcatggcaca aaggcgctct tatcggccat cgggacgcta ataacatttg catttttaag
      481 ttaaatatag taagtgaaga gtaagtctct tctccgcggc tccggcaatt aactcggaca
      541 gcaaagcagg aatttctgct ggtccccggc ccctccgtgg tgggtgagaa ggatccgtgg
      601 tgggttggga ttcc
//
LOCUS       KCKM01002807             689 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44046apa ultra-conserved element locus
            uce-5011, sequence.
ACCESSION   KCKM01002807
VERSION     KCKM01002807.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 689)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 689)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..689
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44046apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>689
                     /note="ultra-conserved element locus uce-5011"
BASE COUNT          211 a          157 c          139 g          182 t
ORIGIN      
        1 cttgaagctt ttattaaaaa aataaaaagg gggaccccaa accaagcagt gtacaaaagt
       61 ggggggagta gggaaggttt aacaagctcc aagtcataga ttataagccg ctgctaaaaa
      121 tttatggctc tttggatctt tgccacactg aacagattgg caagctgatc agaatcgcag
      181 caggctgcct aatgagtccc acacaatttt tcaccccata tttttccaat aaaaaagcag
      241 ttaaatacca accgcagcca cagcagagcc tgccatctgg ctgctttttt ctccagccat
      301 cattaaaatg gttcttggca gtttacacct cgcttttttc tgtacagatg tggaacgaat
      361 tttctgacaa cccttggatg aaacaggggg ctttattgag ctttacagat taactgccta
      421 acttctggtc ctaattttaa gtgtcttagc acaccggagt catcatttta agtgagctaa
      481 ttctatgtat ctgagcccac cagcaacatt tggttaagtt aaagtgagat tcaaaatcaa
      541 catttcgagg agctgtgtaa cccacgccac cacggtcacc gacgtccagc ccacgctgcg
      601 cgctcacacg gattaaaaat aataactata agggcagcgt tcaaagtgcc tacaggggaa
      661 accagagaat tatggtttaa acccattta
//
LOCUS       KCKM01002808             937 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44061apa ultra-conserved element locus
            uce-1606, sequence.
ACCESSION   KCKM01002808
VERSION     KCKM01002808.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 937)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 937)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..937
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44061apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>937
                     /note="ultra-conserved element locus uce-1606"
BASE COUNT          309 a          188 c          186 g          254 t
ORIGIN      
        1 actccaaaag aatctagtgt cgcattccga agaatgtcag attaaactaa catgtgccag
       61 tcaatattgg tacactgtga cccttgatgc ctcctaagca aaactattaa gtccaacatt
      121 ttctcctgta agcacttatc tgtaaggatg gctaacatgt cctctgaagc agatattgaa
      181 actgattgga caataggtag ataccagaca ggggcctggg ggccgacctc tagaaatagg
      241 gggagaaaat cttaatctgc aacacaatgc agctctcttg aaaccctatc attttcactt
      301 cccatgtgtc tgctgcctga ctgtgaatgg atttgaaaag gaatggttag tgctgaaaat
      361 tggatcagag ctaacattct ctcattttta tcagcagctg ccaaaggtca tctgacataa
      421 tagctgatga attcaagccc agtggatttc atttgcaatt ttcaatttac tgaggcctcc
      481 aaaccccaca gtgataaaag cttcccctat cgtggcctgt cacaaacatc aagaaactgc
      541 acaaacccac acgaaagaaa taggagaaag ctgtgcatca tcacagttac agataaggag
      601 aacaggaaga aacagtatca tgtagaaagg tgtggagcgg caggtgtggt tgagtttcta
      661 aatgccaatt gtaatgaaaa gactatgaag agcaatcaaa taacttctac agaataacat
      721 catggttccc ctccccccct tcagtttgaa aattgccttc taatctcttg cttgacatcc
      781 tgaagataaa agtgaaagtg aaaaaaccct gtttatttag acacggaagt attgtacagt
      841 tgatgtattt actgtagttt tgatttacaa attcatgcta ttaagaggcc tattttcaga
      901 gaaagagtat gtcaacgcaa aataagaaat gcatttg
//
LOCUS       KCKM01002809             737 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44076apa ultra-conserved element locus
            uce-7620, sequence.
ACCESSION   KCKM01002809
VERSION     KCKM01002809.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 737)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 737)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..737
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44076apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>737
                     /note="ultra-conserved element locus uce-7620"
BASE COUNT          238 a          129 c          152 g          218 t
ORIGIN      
        1 agaatggggc agggaaaaga gagaaaacaa gctttttgaa ccctgtaatg taaatttgca
       61 gacaattatt cattattaac tgcctgaagc atcacacctc tctcaccttt gctggaatgt
      121 ctgaacatta gggtaaacaa cacgctgctg tcttatcata atgcggtctg cttcactgca
      181 gcaagaactt gtcagaaaca gattgtgatg ttgacttctc aataggggaa aaaaagggcc
      241 taaattagac ttctataaaa agaatattgc atatttattt ccacaataac accaaggaaa
      301 agcgttagtc aagaagcaag caattgggtg aataaataag cttgtctttg ttctcatcaa
      361 ttaagttatt acatcagttg gaaaaccagt gaattataat acagatgttt aatgaaacac
      421 tgctgtgcct ataagtcaaa ctcctatttt gtggtgtgat tttggctgca tagttttgtg
      481 tgtgttaaac cgtatttatt agctgatacc cattattatt ttgagcaagg tataattcag
      541 ttgtcaggct ccagctctgg gaaggagatt taatcagtga gagcccgctt tgctgctgag
      601 cataaaacaa tgcgggtttc atgaagcaat cacaccagtg tgaaaaaatg ggattaatta
      661 gtattgtaca agaacaggca gcatgctcat taaaaccttg tgagctgcct cttgataaac
      721 tgccacttga tagggcc
//
LOCUS       KCKM01002810             709 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44090apa ultra-conserved element locus
            uce-5880, sequence.
ACCESSION   KCKM01002810
VERSION     KCKM01002810.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 709)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 709)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44090apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>709
                     /note="ultra-conserved element locus uce-5880"
BASE COUNT          235 a          140 c          131 g          203 t
ORIGIN      
        1 tagcaaaagc aggggagaaa cagagggagc gagaggtaag aaactcataa tgggattttt
       61 catgtggaac gatcatttta tctaatacgt ctgaaaatgt aatccattac tgctaattac
      121 catgctggca ttgaaataca ggatcacact tcctccagat ccagataggg gcccaaatct
      181 ctctgctcat tgttcttccc atcccatctt gcctccctcc cttcctgctt ctccaagaag
      241 aaattcagcc cttcggacat tagtgaagaa gggcccgagg tctccctatc gtcctaaagc
      301 agaagctaaa caatattagc caatcatttt tgatagatga agcatggaaa ttagttccag
      361 agtttaactg ataactgaaa ccacacagtt acattccatt atggcagcct taattgatga
      421 gctcattaag cccattatta gagaaattga tttcaaatag gcacttaaaa ctggctggta
      481 aaagaaaaag gtgaagagat accgtacaat gtgaagaaag taactaaaat acataatgaa
      541 gcaagtaatt ttataggttt gtttaatgaa agcctcaaga gcatattagt tgctgtgtgg
      601 attttaaata ctcattttat gtactaataa agctcacgtc cattatggga gttctgaatg
      661 cctccaatct ttaatgcagc tctgctacta attaattaat taacctcag
//
LOCUS       KCKM01002811             407 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44105apa ultra-conserved element locus
            uce-914, sequence.
ACCESSION   KCKM01002811
VERSION     KCKM01002811.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 407)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 407)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44105apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>407
                     /note="ultra-conserved element locus uce-914"
BASE COUNT          139 a           54 c           81 g          133 t
ORIGIN      
        1 aagaaaaaaa aagatatagc atcttcaagc tcttggcatc ccttacgaga aaaaattggt
       61 tctaagggtc tctgatcttg tgttttagta aaatagaact gcacggctga ctgacagttc
      121 tgatctaaag catttacgtt taagttttga tctctctgct tttgattaaa actaatgagc
      181 tcatttaatt caaaatggga atctctgata agagaaataa ggttgatgtg attggattag
      241 aggggcaaat taaactctta gagcagaagt ttgtgcttat atagtgtatt aaaaagctgt
      301 tggcgtatta tggcatgtta gatgatgaga aaaatttcat agtaattcat atttaatcag
      361 aagaaatgaa agtactaaat ataacatggc tctgcttttc cctcgag
//
LOCUS       KCKM01002812             673 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44120apa ultra-conserved element locus
            uce-1820, sequence.
ACCESSION   KCKM01002812
VERSION     KCKM01002812.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 673)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 673)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..673
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44120apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>673
                     /note="ultra-conserved element locus uce-1820"
BASE COUNT          228 a          110 c          132 g          203 t
ORIGIN      
        1 aacaccttca gaagctttct taaaatgctt atcattttac tattgtgcaa attaacagga
       61 aactgaatga caagaaaaca aggaagtaaa caagatctaa cacattttta gaggctattc
      121 acatctgtca ctctgagttt aaaataaagt ggacttgcta gttattatga ctcaaagtgg
      181 acagaataat agatcataag agtacaacct ttctatctaa ggtcaaataa ttgtgatttc
      241 tacagtagat gaaagtttaa taccctgttt cattaaaaat tctcagaaca ttgaacataa
      301 gtcaacattc catggagaag aaggtattat gcagcctgca tgtgtgcata tctgcatatc
      361 ggagcacaaa atattgacat gataattgta gtcaagcctg attgaacagt ggcctctggg
      421 aattcagctg gtgttgtacc aactggatgg ctgctcagga cacagtttga aatgcaaggt
      481 gcaagttagc actttattca gcacaggcag gcatcattta aaaatccttg ggggaaaccc
      541 tggtgatgtg cagatgttaa agcagtctgt tctgaagcgc tgatattttg aacactgtga
      601 gagacttgtg tattttagat gaaaaatgtt tgcaaaatta ttagagaaaa atgtccctat
      661 tttctttact act
//
LOCUS       KCKM01002813             599 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44135apa ultra-conserved element locus
            uce-5912, sequence.
ACCESSION   KCKM01002813
VERSION     KCKM01002813.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 599)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 599)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..599
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44135apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>599
                     /note="ultra-conserved element locus uce-5912"
BASE COUNT          199 a          102 c          119 g          179 t
ORIGIN      
        1 aatatcagaa gttttaagca tacgaaaaaa gttaagggta tttgaatttt ggcaaattga
       61 ctcaatgttg tgaaagtttg agaagatagc atcatctgtc ggtagcacag ggatgagaaa
      121 tataccttat gaaatgtcta gcccctacag ttctttttaa cagatgttat tgtttttcta
      181 tttatttctt gaataaaatt gcagctggaa cagcaccacc aaacttctca caacgactac
      241 agagcatgac tgcaaggcag ggaagtcaag ttcgacttga tgtgagagtg actggaatcc
      301 ctacacctgt ggtgaagttc tatcgggatg gagtagaaat ccaaagctcc cccgattttc
      361 aaattttaca agaaggagac ctttacagct taataattgc agaagcatat cctgaagact
      421 ccggtaccta ttcagtaaat gccacaaata atacgggacg tgctacttca acagctgaat
      481 tgctgattca aggtaaaaat taagagagta ttcattgttg taatggtaat ggtacaatac
      541 acatggcttc atcaaagtta tattcagtaa gataatttat agcttctttc ttaagagtt
//
LOCUS       KCKM01002814             839 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44151apa ultra-conserved element locus
            uce-1438, sequence.
ACCESSION   KCKM01002814
VERSION     KCKM01002814.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 839)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 839)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..839
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44151apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>839
                     /note="ultra-conserved element locus uce-1438"
BASE COUNT          275 a          118 c          146 g          300 t
ORIGIN      
        1 ggtcagacac atttctctga actatttcca agaggaagcc gtggaacaat cctagcaagc
       61 ttaatcttag attgtttgtg ttctgttgtt tgctcctttg aattcaattc taaaggaatt
      121 ctggtacgtg gtgaagcagt aaatgaaaaa actgtatttt tgttgtgctt aaaaaagtat
      181 gaatttatta atcatatgag ctcaagtcca gcaaagtatt gtgaatgtgc atgacttcaa
      241 acatgttttc attattttgc tggatcagcg ttgtgatttc aatgttattt aatactgcct
      301 aatattaaca caaattttaa actggcaatt aagaaaacta tgttcatatt agtataattt
      361 atctgttaga ttagggaggc cttacagact gacttcactt aaagaggatg tgtcacttac
      421 tgtcagtgtg gtatggactt tatttgctta aataccttca tttgtaaagt atgtctcact
      481 tgaaattgct ttgtatacat tttgtaaaaa tatttataaa atgttttgta aaaaaaaaag
      541 tataacaaat tgcagtttat tttgttatgt tggataaata ctgttaaaag acacaagtca
      601 gtaaatatat tgttaatcca tggataggaa atgtttagtt ggagattaca aattgaaaca
      661 accattgcaa tacagccaaa gatttgggaa aaaacgtcta cctgtgattg tcttgattta
      721 accaagttga atatttacat ttccagaaca gatttattct cagttttaag taatacggtg
      781 gcaaaatact cttactcgtg cgctttatgt aatgcagccc agccctgtta caaagtatt
//
LOCUS       KCKM01002815             278 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44167apa ultra-conserved element locus
            uce-915, sequence.
ACCESSION   KCKM01002815
VERSION     KCKM01002815.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 278)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 278)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..278
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44167apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>278
                     /note="ultra-conserved element locus uce-915"
BASE COUNT          108 a           39 c           48 g           83 t
ORIGIN      
        1 tccttttact tttgtataaa cagggaattg aagggtaaaa tagttaaaac ttaatgctat
       61 agtgctaatg tggcttttaa atcacgtcag cagcaatcac tgcattataa ttaacaattt
      121 attgaaccag caataaaatg aacatcacat tacttcttaa agcagcagaa taaaatggct
      181 aataaatagc ataagccaga caaattgcag agtaatagaa attttcttaa gatttatagt
      241 gtgcagaaag atggatgtgc tattagtagg agctccaa
//
LOCUS       KCKM01002816             753 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44182apa ultra-conserved element locus
            uce-4872, sequence.
ACCESSION   KCKM01002816
VERSION     KCKM01002816.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 753)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 753)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..753
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44182apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>753
                     /note="ultra-conserved element locus uce-4872"
BASE COUNT          218 a          135 c          129 g          271 t
ORIGIN      
        1 agaaagcaat actttttatt ttgccaatga atctgctgca ctttgcaatg tttaagtggg
       61 cttatacaac ataaaccttt gggacattta acatatcaag ctcaaataaa aatgacacac
      121 agatcgttca cttctgaagc tgccttgtgt tcgcttattg gaacactcca tccctgtggt
      181 ttccgaaata ttataagtat atattccaga ttaaactttc tattttcctc aaggtagtgt
      241 tgcttttcag ccctcaatgg cttggttttt gcctaaagaa tcaggtccta tcagcaaaat
      301 caaaggcgat tacacagctc agtagtcatt taggatttct gtggctcaat taagcatgta
      361 tagcatgcca cagccactga gactctgttt attcagtgaa agtgctctgt aatttattta
      421 aaataatcca tctttaacaa ataaagaggc ctttgactgg ccatcgctgc aggcatccat
      481 ttaaatgctg cctgcttgat ggtctgtttt gctattttaa gttaaatacc tgacaaaagt
      541 gattcagttt tttggaaata agttttgtat gcatgatgtt tattttcttt tacactaata
      601 atcagttaga acttcttttt aacagattga ccattaaaaa tgattaatgc tattcacttt
      661 gataatagca gattgtgact gccagctctg tgtgtggtgt gtatttaaaa ctgctcagga
      721 attgtatttt tatgacactt tgctaatcat gtt
//
LOCUS       KCKM01002817             882 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44198apa ultra-conserved element locus
            uce-301, sequence.
ACCESSION   KCKM01002817
VERSION     KCKM01002817.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 882)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 882)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..882
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44198apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>882
                     /note="ultra-conserved element locus uce-301"
BASE COUNT          269 a          147 c          158 g          308 t
ORIGIN      
        1 ttcatatgtt tttttacttc acgctaaata tcattaagct gctagtagcc acaaatcttg
       61 tatgtgagaa cccaagataa ctgcttttcc ccatcagtga aggcatgttt gcatttttgt
      121 ttaataacaa ctttgatcct tctactgttg gcaatggtca ttgaaaaatc ctgacataaa
      181 gaaggtatct gcaagataaa gttctacaag ggatgattag cagcacttaa gttttctttt
      241 tgttgaaagg aagaatccct gattgaacag tgcattgaat gatatgacaa gcaagtactt
      301 gatccctgtc cagctggaaa ggaattgtat tcatcagcag ctttttagct aaggatgtct
      361 ttatattttc actctttgtt tgagtctctc cagatcctcc ctttacttca tgtcagcact
      421 atatagtagg tatgccaagt ggttttgaaa tttaaattac agtctctttt tcagatgtta
      481 ttggaaagaa catgtaattt ataaccacgt gttaggagta caggatgttc atggttcact
      541 gccaattctt cttttgtaaa gttaataaaa ctttcataaa acacttatac acttgtatat
      601 ttcatggtaa agattttttt atctcatagg ctaatgtaaa gatttattaa aaacattttt
      661 ttgttaagag gagtgtcaat agtttgcagc tgagtgtaat tttgaattcc cagtagatga
      721 cagtctgact gaaaatgaca ctaacagctt tgttgattta gcactaaaaa taaaggattc
      781 tttcaaatga tataaagctc taataccctg agtgtgctga aatacacttg agacccttaa
      841 gtagagtttc agcgaaacgt tcgccagcac tgtggattcc gg
//
LOCUS       KCKM01002818             369 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44212apa ultra-conserved element locus
            uce-2414, sequence.
ACCESSION   KCKM01002818
VERSION     KCKM01002818.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 369)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 369)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44212apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>369
                     /note="ultra-conserved element locus uce-2414"
BASE COUNT          128 a           49 c           66 g          126 t
ORIGIN      
        1 gatttttgaa ggttgctcat tttacttatc cacccaaagt caatttgagt atgaatatat
       61 aacattttac tcataatagc aaacaacttc agaggagaga catttattct ggaggcagag
      121 attcgaacta gacagcaatg atgcattaca aatatataat tatttgcact aatatttgag
      181 caggtggaat ggattagtac atggtcaaca ttgcactgct gataacatgt atttttctat
      241 attaatatgt actgtgcaac atgtattaaa attgtcaata attcatttta acagagatag
      301 caatatttat attgctgtgt tctacagaca gtagagtgaa ttgttaaaat gtgtaaagct
      361 gggctagat
//
LOCUS       KCKM01002819             513 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44228apa ultra-conserved element locus
            uce-7045, sequence.
ACCESSION   KCKM01002819
VERSION     KCKM01002819.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 513)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 513)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44228apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>513
                     /note="ultra-conserved element locus uce-7045"
BASE COUNT          188 a          107 c           78 g          140 t
ORIGIN      
        1 aataaaaata ataataaata tatagcttca aattcttatc aatatacagt taaaaaacat
       61 ccacaatttt atttattggc tgctaacact acctggacag agggcagtgt tattgcaaac
      121 ccttgattct cttaaagggc cgctgcagtg tgtcccgtaa ggtgatacac aagttctggt
      181 tcgcacctgc gacccttgac cacaagtaac tgaacacgta ctccactggg cccactcttc
      241 aacaccagat tcacctgtat tcaagacaac aaacaaacat gaatatagac ataagtatta
      301 atgagacttt ttttttgcta aagctcatct tctgctcata taaatcaaat aaaaaaggac
      361 cacacaaaaa taaatattta aaaattcatg gaggaaagca gctgtgaaaa tgtgcaatga
      421 atagaaaata aagacaccta caatgctgca gtcacataac acctgtcaga ggggaacact
      481 ttgatttctt accaccattt acaacttttt gtg
//
LOCUS       KCKM01002820             683 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44243apa ultra-conserved element locus
            uce-4020, sequence.
ACCESSION   KCKM01002820
VERSION     KCKM01002820.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 683)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 683)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..683
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44243apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>683
                     /note="ultra-conserved element locus uce-4020"
BASE COUNT          243 a          137 c          143 g          160 t
ORIGIN      
        1 taggatatct atgagctctg gatctgccag ccttcctggt gtaagcctac tctgtactca
       61 acagaacaga cataggaccc tgacaaaaat tggcaggcaa gctttagatg ctgagtgaca
      121 catactgatg cacagagtca aagatgtcat cttcatacaa gctccactag ttatgagctt
      181 gagagaaaaa tgaaacaaaa aaaacaaaat aaaacaaaac caaaaaagag ggggggaggg
      241 tgagagtgga gcgagacctc cagaaaataa acagggtgta cagtttcaaa ggctacagac
      301 acagacattt cattgttcaa gccaattatc agtggaaaat aataacaaca gatggattca
      361 gagtcactga cttttcatat gcacttcatc tctgcacaac agatgatgaa atgcgagagc
      421 tatctcggaa aggcaaaaca tctttcagta aaagaactct atactccaga tggggacctt
      481 ctaaggcagc tgattatctt cttataatgt tgtaagatag acttactaaa catttcaaga
      541 actgatcaga taggatgagc acaatggcat cattatgagg agtaagttgc ttcagcctca
      601 gacttgcaac tcaactagtc agagatttca atagggtcag agctgaccgt tacccgtttt
      661 tgcaccaagc agcagctcca aaa
//
LOCUS       KCKM01002821             446 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44258apa ultra-conserved element locus
            uce-1265, sequence.
ACCESSION   KCKM01002821
VERSION     KCKM01002821.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 446)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 446)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44258apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>446
                     /note="ultra-conserved element locus uce-1265"
BASE COUNT          151 a           80 c           80 g          135 t
ORIGIN      
        1 acatttagtg tccaaaacaa gttgattggt aacatcagtg ccagcactac aacgtcatac
       61 agcgacttca tggtattctt tgacagttcg tctaagtttt cgttccaccg aaaattacaa
      121 aaggttctgc agagctttcc ttagcaagct gaagcttact agtcatttgt ggatgcgcat
      181 aaaagctgct tatagcacag ctatggcgta agctattttc taagcaataa atggttcgag
      241 tcatctattt tgtcctgaaa tgctacctgt agttacagca ttgcttataa atggtcatag
      301 taaattcagc atcaaagaga atattacaga aaaagacagc agcagaagca ttagcattat
      361 ctagtattta tatatgttat caacataaca cagcagtaaa aggtttaaat gcatattaat
      421 gggtaccgtg tctaaaaatt actaaa
//
LOCUS       KCKM01002822             950 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44274apa ultra-conserved element locus
            uce-2120, sequence.
ACCESSION   KCKM01002822
VERSION     KCKM01002822.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 950)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 950)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..950
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44274apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>950
                     /note="ultra-conserved element locus uce-2120"
BASE COUNT          293 a          163 c          211 g          283 t
ORIGIN      
        1 aaaaagatgc tcagcccctc tagtgtacta cagtgatgaa tgttggaagt gcaactttgg
       61 aagcaggaat caagaaaatt agtaacagtt ggagaattag catgtaaatc aataatatcc
      121 tttctcttgc atcttgaaaa ctgagggcat acatcacaca ctgcataatg aaagggaggg
      181 cagaagttag agttgtaacc tcctttacgt tactaggtct gcttttactg caagaactgt
      241 ttaaaataat ttcaaacgtt agagtaaatc tctagtaaat atttaaacta tgtataacta
      301 gtcacaaata aattaagctg attttatgca ttctctctaa ttagaagggc acagcatttg
      361 ttgaaacgtg attagtatta ttcattaagc aaaaaattct catttgtatc ttattatcac
      421 tattctgcat aaaccaacac aatttgtcat gaactccctc atttgctgta tcctcaaaaa
      481 gcagattatg cttatttttc atttggacag tggaaaatca agccaggtgt ttggcagcac
      541 cagagtgttc aggtgtaact gtgccagtga tggtacatta ctagcagcgt ggatgaagaa
      601 tgaggcatgg agaatcttgg gactgaggtg ccttgaggcc catcccttta gagtggtcct
      661 gctgatgaga caggtggtgg tgtataggac tgaaaaaaaa gcgagaaact tttttgtaaa
      721 gtcagccttt caccttcaag tggaaatgag aagtgctttc acatagctgc tgctgctgca
      781 ctgagagatc tggacgtgtt tgaagtctct gtggctgata cttttgtatg aaagttttat
      841 aaagctgaag aatgccagtt ggtgtgcaga ggcctctgcc actgtcactg tctgagagga
      901 atgggagcaa tatcccacgg gcagtgcact gaacagaaat atttatatgt
//
LOCUS       KCKM01002823             518 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44289apa ultra-conserved element locus
            uce-4940, sequence.
ACCESSION   KCKM01002823
VERSION     KCKM01002823.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 518)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 518)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44289apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>518
                     /note="ultra-conserved element locus uce-4940"
BASE COUNT          156 a           87 c          103 g          172 t
ORIGIN      
        1 tgttcctatt aagccagact ggtttccaaa acttaagaaa agttttgctt tctcttgtgc
       61 cgtttataat tttcagtttg ggtcacctct ctttcaagta ggaggaggag agaggattca
      121 ccctggcctg atggagtcag ttgctcacaa tacattacac ttacaattcc ttttaatatt
      181 ctgcttagac acactgtaaa ggaagaatgg gtatccagaa taattaaaat atgtttaatt
      241 tgcatggagc tcagggcatt gttctgacat caaacatcac tgtcaaccat atgtggaatt
      301 tcaactgcca agtgcttcat ttatgtgaaa attagcttaa gtgtacaaag aatgaaaaat
      361 ttatgattat ttcacatttt aataaatgca gcgctatgca ttaatttaga cttctaaaac
      421 aattttgaca gtgacaaggg aatccttcgc agactaagtg ctgtagtgtg ctgtgtttca
      481 catgtcctgt ggaattatgt ggtagagtgt taaggcag
//
LOCUS       KCKM01002824             673 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44305apa ultra-conserved element locus
            uce-576, sequence.
ACCESSION   KCKM01002824
VERSION     KCKM01002824.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 673)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 673)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..673
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44305apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>673
                     /note="ultra-conserved element locus uce-576"
BASE COUNT          260 a          107 c          116 g          190 t
ORIGIN      
        1 aaatttatca aaagccaaca gtaaaatagg agaaaaaatg aaaaagcata gaggcataca
       61 agaaagaaag agcttgtggc atatgcatga gcttaaaact tcaagaaaaa gttaaattaa
      121 tgaaggtagt tcacagttta agattaatta tttttgcatt tctttttctc agaggttcct
      181 cttcaaaatt ccaaatataa atggtgttgg gattatttag aaaccgagta cattataact
      241 aaggcctata gcaacctcac tcagcagtga aatttgttgt ctccctctga tcctcagatt
      301 atggagatga ggggatgaat gtacatcagt aagattccct accgagatag cttttcactc
      361 ttttcagtaa gaaaaagatc aaagggaaaa tagctaatta acataccaaa ggagacaaaa
      421 cccctagagc tttatcgttg ttgcaatcca ataataaaca gccaagtaca aaaaagatta
      481 tttgatagtg acacacagaa ttgaaagcct ttgaaatgtc agcttctcaa aaaaatattt
      541 ttggaaggga aaaatatcca taattataca gaataatact taaacattgg ggagtaagtc
      601 ttcattcctg tgagagctgc ttgtaaaact attgtgctat acaacaacaa cttggcttgc
      661 tcatctaaaa taa
//
LOCUS       KCKM01002825             253 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44320apa ultra-conserved element locus
            uce-1017, sequence.
ACCESSION   KCKM01002825
VERSION     KCKM01002825.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 253)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 253)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44320apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>253
                     /note="ultra-conserved element locus uce-1017"
BASE COUNT           72 a           69 c           58 g           54 t
ORIGIN      
        1 tccagggctg gaaagcggag tgtaaaagtt tatgagctca tcaggattgt tgtaccatta
       61 catcagaggc aattataaat ggccaagagc aggagatggg gagccaatca gatcacagat
      121 aggatgtcaa cctaagacca actgtctcct ggctttgaca gaaggatttt acctccataa
      181 ttcaaatccc aaaccaaagc gatctgcact cgctgctccc atcgccgagc ccttcaccgg
      241 cgctcccgcc cgc
//
LOCUS       KCKM01002826             510 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44335apa ultra-conserved element locus
            uce-5619, sequence.
ACCESSION   KCKM01002826
VERSION     KCKM01002826.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 510)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 510)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44335apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>510
                     /note="ultra-conserved element locus uce-5619"
BASE COUNT          162 a           99 c           94 g          155 t
ORIGIN      
        1 acagtccttt atgtactact atgtatggag acgaaataaa aacagattta acctacagac
       61 ctttggttaa cttcttccta aactaaatat aaaatgttac ctcatcttgc ttggattaaa
      121 aagggagagg gggaacttcc cccatcacca cagattccct tattgagaat ctcttctata
      181 taaaaagaag agtctgcata taaaagacaa tccagagaca tctttgaagg ttctctttca
      241 aagcatctct acttccctga gtgtctgggg atttctgtta ttaattgaag ttaattttct
      301 aggatatcag tttgccatgc acgtgggaaa gattgatagc ctcttcgatt ctcaagagtg
      361 ttgaaaatga cactgttcca tcaccgggtg tcttcacttt tatcatcaca aatcaaatta
      421 taaacatcgg ggcaaccttg ctggaatctg gcttcgggag atttccataa gattaattag
      481 gcggccaaag caaagatggt aaaatctaag
//
LOCUS       KCKM01002827             323 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44350apa ultra-conserved element locus
            uce-6362, sequence.
ACCESSION   KCKM01002827
VERSION     KCKM01002827.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 323)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 323)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44350apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>323
                     /note="ultra-conserved element locus uce-6362"
BASE COUNT           77 a           70 c           62 g          114 t
ORIGIN      
        1 gactgtttca tcctatttgg tggagcagct tgactttttt tcccttgctt ttggtgatgg
       61 ttgtgagtgc agaagttgat tgacagatgc atgccagaaa cccccattct ccttttcaaa
      121 gactacatat gatggattgc gatctttcag ctcagcagga cacagggacc atgcaagctg
      181 taattggtca ggtatggagt cagccatttc tcaactcccc ttttattttt ttttcacaag
      241 gctctaacca tatgattcac ataattcata tttacagtac catctttcta tctgtatctt
      301 tagctaccag tgagtgtagt act
//
LOCUS       KCKM01002828             766 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44365apa ultra-conserved element locus
            uce-3191, sequence.
ACCESSION   KCKM01002828
VERSION     KCKM01002828.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 766)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 766)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..766
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44365apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>766
                     /note="ultra-conserved element locus uce-3191"
BASE COUNT          251 a          117 c          142 g          256 t
ORIGIN      
        1 attattgata taaatagtag tagaaacttc tggcacaaga tgtgccaaag taactctagt
       61 ttcgtcctgt gagaagctta tagagcttcc ttttaaatga atgatatttt ggtcagtgac
      121 tcaagtgaga gtgaataaag gctactttta aaagcagaat gttgttagca tgtggcagag
      181 agtttgtcta ctctgcttgg ggaaaacagg ctacctgtgt aattatttcc ttagtgaggc
      241 tgcataaaac ttctattgca tttaattcaa cacaaaacaa tttctatatt tcatgtcatg
      301 agcaggaatg aaaatggaga tagttcatca atgctgatat atgatataaa aggagctgag
      361 aagccaaggg tatgagagtg cataaaaatg ttttgtgtcc tgaccagtac actgcttaaa
      421 aaaaatttta caatcagccc caattgttca ttcttcccat gcagaagata ctcacatatt
      481 catttttaaa agggcaaatc aaccataatt cagtttataa actgtgaagc tggttgcgaa
      541 tgtctggatg aatattcatt agaatctctt aatctgccat cgactgtgat tcattaggca
      601 tatgtaaata tcactcactt taattgcccc taaactgact taacataata ttgtcattag
      661 caaattatta gttatttgtg taactaatgg tacattatga tgtacacgtt aaatcgccaa
      721 atatatgatt gtaattatga tgatgtttta tgctgggtgc tttgta
//
LOCUS       KCKM01002829             540 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44381apa ultra-conserved element locus
            uce-2328, sequence.
ACCESSION   KCKM01002829
VERSION     KCKM01002829.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 540)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 540)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44381apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>540
                     /note="ultra-conserved element locus uce-2328"
BASE COUNT          134 a          139 c          130 g          137 t
ORIGIN      
        1 cccggaaccc ccgggcccgc cgcccctttt cacgcttgcg agatgctggg gaggcagcgg
       61 tgcgtttgct tgtgcggagc acaccgcctg caagcggttg ccttggcaga aaggtgcagc
      121 tttctgatgt tcttttgtct gataactaat tcaagttaat gcgatcttta tgtaaagcta
      181 acagcggata attgtctatt ttctcgccaa caatctccat cacaatcact tatctggaaa
      241 cctgcggttg tattaatcgt tatattcccc gagataagcg tctctcgaat tatcagtaaa
      301 cactggaggg aaattaaaca aactccagag ccacttaagt ttcctcggca gcttttaacc
      361 tccttctctg tgccgggggg aaaaaaccca aaccaacctg ggaccagagc acaagatgga
      421 tgtgggtgtc tgtgtgaaac agtggagaag gccctgaaat ttgggataac tctaaagagc
      481 cgagtccctc tcaaattccc ttcgaggtgc ccgtgttaca gagacaggct cgcaccttgc
//
LOCUS       KCKM01002830             436 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44397apa ultra-conserved element locus
            uce-264, sequence.
ACCESSION   KCKM01002830
VERSION     KCKM01002830.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 436)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 436)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44397apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>436
                     /note="ultra-conserved element locus uce-264"
BASE COUNT          112 a           75 c          107 g          142 t
ORIGIN      
        1 tattttttat ttgtgtcatt ttgttccctc agacttacga ggataaaact tgcactcctg
       61 ggggtgccag gcttttcaga tcttgcattt aggaggagcc gtgatgcttt ttgcgtctgt
      121 ttgtctgtcc atctgtctgc gggtctataa taagctgtgc agcgagacag cagcttacta
      181 tctgtgtgtg tgaaattagc taattggtgt tagcagcaat attttcacat gttttataag
      241 caaagtgcag caaggtatat aaatgtagat atgatccaga gacacacgcg cgcgcgcgca
      301 cgcaagcctg tcgctgctca tgcatagacg ctcagaagta attaatgtta ataagatttt
      361 aatgtgcttg tgagatcata atgaggagaa atgaatgctc tgattagaaa aaggtaactg
      421 tgtgtgtgtt ttggct
//
LOCUS       KCKM01002831             851 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44413apa ultra-conserved element locus
            uce-3228, sequence.
ACCESSION   KCKM01002831
VERSION     KCKM01002831.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 851)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 851)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..851
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44413apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>851
                     /note="ultra-conserved element locus uce-3228"
BASE COUNT          230 a          178 c          160 g          283 t
ORIGIN      
        1 cattgcctgt cttaaaatag ttctggcact accatttcct tggctgaaaa atactgaact
       61 gtaagaagct ggttctgttt aatcaattcc aaattaacca cactaagcta tttttcatat
      121 tgttcaatgg gatttttttg tttaattctt cattatttca gctctccttg cagttatctt
      181 acgcgctggt ctggggaaac ttcaccacag cttgagagag aaatatgtgt tcacctttgc
      241 ttggactcta cagcctggat ttgtggttgg ttttgccttc cttacaaata aagagtttct
      301 ggtgcagcaa cctgcacatg acgcctccct aataaattca catgacagtc atgaaacgct
      361 cctataatca gtgacatggg atgattttcc gctcctgaca agcctttgta ttgagtatga
      421 taacagttac tttgtcttca tccactgctg gagtataata tcaatccgtt tgatgatcca
      481 gcaaacgaag cccaacactt ctgtatcaat cttcatagag tgctgcctgt tgtctaacaa
      541 aaagcctgaa atgagatcat tcaatcactt tgctggctag gctaggcttc tgttactgaa
      601 gtggttttaa ctccctgtca cttgctttct ctttccttta cacaacgaag ccggagaatc
      661 taatcacaat agaaacactc ggatcccttc ataattttag ggcaacttta caaagcaaac
      721 aagggagaga aaaatggttg gcagagatct ctattctgat atttgttaaa gaaatgcgat
      781 tttctgtgga ttgagaggac tgcggtgttc atttatttca tgggtagttc ctaggaattc
      841 acttattccg t
//
LOCUS       KCKM01002832             574 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44429apa ultra-conserved element locus
            uce-220, sequence.
ACCESSION   KCKM01002832
VERSION     KCKM01002832.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 574)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 574)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..574
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44429apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>574
                     /note="ultra-conserved element locus uce-220"
BASE COUNT          195 a          118 c           88 g          173 t
ORIGIN      
        1 acctaatatg ttttgtaatc tacaccaatg taattttatt agatattccg cgcggttctt
       61 acatcaaaca gcctcagaag ccccaggatc attttatatt cactggaaga cagaaagaaa
      121 tccaaaacct agttaaataa attgttcatt tattccttcc cttttatgca ccaagatcta
      181 catgtggtca ttaattataa agagactatt atagcaccat attttcattc aatacgatgt
      241 cctggtatat atcaaagaag tcccataatt aaaacagaag ggccacaatg acaattaaaa
      301 ttacaatcta tatggggaaa gaaagtacag ttctgcaatt tttcaccctg tcactgtcag
      361 caccggggga tattccagtc acgtctcttg taaagcagcc taaattcttc ttcaccaatg
      421 caacctcaaa agcattatca gcacctaagc aaaagcctat gcaagtataa tttaatacca
      481 agccacagtt tgcaagtaat agcgtataaa gtgatattta agtggtgttt taagcacact
      541 tctgatggct acagccgctt tttactggta aatg
//
LOCUS       KCKM01002833             910 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44445apa ultra-conserved element locus
            uce-7242, sequence.
ACCESSION   KCKM01002833
VERSION     KCKM01002833.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 910)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 910)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..910
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44445apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>910
                     /note="ultra-conserved element locus uce-7242"
BASE COUNT          314 a          160 c          166 g          270 t
ORIGIN      
        1 catcaaatta gcatccagga acataaaatc aaacattaaa cttacaagaa aatccatatt
       61 cattctgggt tctctgttca gttgaaatgg gataaatgaa accttaaaaa gaaagaaatt
      121 aaacaaaaat gggaacgaaa tcaaattaat gaggagaaca aaaaagggaa gtatgaaaaa
      181 tagtttaatt aaaaaaaaag aaggaaaaga aactgatggt gctttaaaat tctgatacag
      241 cacagaatta tgattttgca tcccctgtct cctccagagc cttactgaga attaataagc
      301 aggcagattg aatttctaag ccaaaatcgg tctcgagtca ctaacttcgg agtgcttaaa
      361 gtctttcttt tattgagcat aaactctaat ggatctaatt tatttcagac atcaagggtc
      421 attagcatat ggaaagtctt ttttccttat ccctgccata tgctttaatt cccaggacat
      481 gttcggtgag gctctaaaca gtttttttat ttaattatgg tagctcgctg ttgatctaat
      541 agagctaaag gagacctgtc gtcaccggtc agaggttaaa tacccatttg ctgagcagag
      601 tccatgcaca aagccctctc tctgtattcc cctggaatta ttttatcctg ttgttaatac
      661 atgttcaata ggaattcccc agggagaaaa gaactggaca gcaaacggga aactgagtgg
      721 tttctcttcg aaattattac aagatcaata agtcccctgg ggtcataatg ttatttattt
      781 gaaaactttg caagcaccat atatcgacaa aatcataaca caatttacag ctgtatttga
      841 gaatggataa ataagagaga tggtttcctt tgtcttttct ttctgcagct cctaaggaca
      901 gaatgctgga
//
LOCUS       KCKM01002834             871 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44460apa ultra-conserved element locus
            uce-1946, sequence.
ACCESSION   KCKM01002834
VERSION     KCKM01002834.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 871)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 871)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..871
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44460apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>871
                     /note="ultra-conserved element locus uce-1946"
BASE COUNT          248 a          169 c          169 g          285 t
ORIGIN      
        1 ttctgttacc agacacactt aattcatttc tgcgtaaagg tcttgatgct tataatatta
       61 gtgatgtact ttgccttgag ataccagcta cctcgggttc cactgctctt ctgataggtt
      121 ttatattcac aaaagctgtt tacttgaagc tctgtgcact tgcaaggatt gctgctgaga
      181 ataaaggctt tcctaacccc aacagtctct ttacattgtt caaggtggat tgctgcagtg
      241 atcgtgatgt cttaacttac tcttctcctc tctacattat tttaatcgac tgtctttatg
      301 ttgcagcatc ctagcacgta cggtatatta aagccccaga gggaactgca agcgaaaaca
      361 ccttgttctt ctaagaactc caaacttttt ttactggcta cagaataaat gctgcctgaa
      421 tgagtaatga ttagaaagct tttggaactg tattaccata ggtgacagct ctgaagagat
      481 aggcaggtaa tgttaagagg cagggataag aggctatgac attatgtctg gagggttaag
      541 gactcacagt caaagcttga actgctatta ctggatcaat acttctcagt tcaacactta
      601 tcttgactac tggttagagg cttttgtaga tatgaacact gagagagcaa aataaaactg
      661 aaaaaaatga ttgttgctgt tcacttacat gtggattgct gcagttattt aggtttcaga
      721 tccacaattc ctttttcatg gggcaaactc caatgacctg aaagaaggat aaaaccaaca
      781 agttatgaat tatattgcat tttccttgtc cttttccttc attttctacc aaaagaaagt
      841 gaaaccctgt ctgtttttac gggtctactt g
//
LOCUS       KCKM01002835             810 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44476apa ultra-conserved element locus
            uce-4413, sequence.
ACCESSION   KCKM01002835
VERSION     KCKM01002835.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 810)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 810)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..810
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44476apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>810
                     /note="ultra-conserved element locus uce-4413"
BASE COUNT          296 a          129 c          155 g          230 t
ORIGIN      
        1 gcatcagaag cgagaggttt tgctttagca aaagatttta cctaaagact gaagtctttt
       61 cagcgaattt cagggagaat tttcagtaat tttagtatcc gtacaggaac acacaaatca
      121 gaccctgaat ttgatagtat ggaatgtttg atttcaatac aattttaaac cttataacag
      181 aatcagcaac atattttaat caggtacctt ttcaagtatt caccagttgc ctgggggtta
      241 tgaaataata ctaaaaactt tataatcatt cattgattta gttttgagcc tagtatatca
      301 tttgaatcca atgggaacat aaagagctat ttgtgaggtc aaccacagta cagacagagg
      361 ctgacacgat atcgatggca aggtggaaag aaattgccaa atacagcaga tcaatacctc
      421 gtttcactgt tacagccttc tggagacata aaatatatat ctttacagct acaaaaataa
      481 taataatgaa agtgggagat aaatgcttcc ctcaaggtaa actatttgat tagctgaggg
      541 caaaggtgac aatagcagtt acactaaagt aacttcacag tcttaaataa aaatggtggg
      601 atgagcagca gataaaaggg caaaatgaaa ctgaacaagt tctaggagat aaagatgtaa
      661 ttcttttaga aagtggggta gcatgtgtac aaaggcaaat aattgttaca gtagaaaaag
      721 gtagagctca gtttcttccc agagtaaaac tccagtaact acaaaagtgg tttgaaatta
      781 cagccctatc attttctatc cataagcctt
//
LOCUS       KCKM01002836             709 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44491apa ultra-conserved element locus
            uce-4336, sequence.
ACCESSION   KCKM01002836
VERSION     KCKM01002836.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 709)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 709)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44491apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>709
                     /note="ultra-conserved element locus uce-4336"
BASE COUNT          187 a          155 c          143 g          224 t
ORIGIN      
        1 cctctgagtg aaagcagaca cttaagccct ttgttgttat ttcaattttt ttattttttt
       61 cacagagaac tgccccacgc aaagaaatac atggttttcc tagtgcaaga cagccactgt
      121 ctcttttcag agagggatgc tcagtctctt tgttctgacc tccgtgcaaa agagtttatc
      181 cactttgtca tccaactcat attttttaat aacaagttgg tatgaaccga gaagacatgg
      241 gagcttttaa ctgcagttgg aagaaaccca gctttagctt gctgcagact ggagctagga
      301 aagtcattag attaacctct cttgacaggt caggctcagc aaatattctt aaaaataact
      361 cttccagtaa tttatgacct ttggggagcg taatcaatag cgttaagagg agaggcagcc
      421 agacagcgct tcctggtcgg agaaagtttc ttgtctttgt aatgtttgca ttctgtctgc
      481 ttgtatgcaa taagactgac ttgccagtga tatcataccc ctcttactcc atcagttttg
      541 gagacataca tttttattgt caatttgccg tctcctctgt tgttttgtgc ggtatctaat
      601 tccaacaaaa accaatgcat gaatgcgatt accaagcaag gggaaaatgc acagttcatc
      661 gtcttccacg ttccctctca cctctctgga tcgctggagg gagatctgt
//
LOCUS       KCKM01002837            1088 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44506apa ultra-conserved element locus
            uce-233, sequence.
ACCESSION   KCKM01002837
VERSION     KCKM01002837.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1088)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1088)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1088
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44506apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1088
                     /note="ultra-conserved element locus uce-233"
BASE COUNT          283 a          239 c          220 g          346 t
ORIGIN      
        1 aatcttagat tattgatgtc caaatgttta attgcttaac tattccacat ctacaaacct
       61 gaaaagattc ttgcaacgtg gctataaccc cctgttgctc acatgggtga agttttataa
      121 acatggatgt tttggcttgc taggaagttg atttatttta tttaaatgca tgcagatgat
      181 tattccttaa aagctaagtt gaaaatagct tatatcagga gacattctat cttcttacag
      241 tgtcttgcaa atgcaaaacc agatgggtat tttttttaaa ggaattgcat ttcattatac
      301 agtcttctta ggtgaatttt catgtttaag aagccggaat acaagagagt gctatattag
      361 tgtattattc tcacaacaaa caagccactg ttctgttgct acctgcttgg ccattgttcc
      421 caattgtgta tgctttgcag tggtatttgg atggtttcct gctctctgcc agcacaaaaa
      481 aggcatttct gttacaatgg cccctaacca cacaatgacg gcattaagga tttatttgga
      541 ggtttcatta ttttctcctc ttttgttcct tccaggatgt cttccaagcg accagcctct
      601 ccgtatgggg aagcagatgg agaggtagcc atggtgacaa gcagacagaa agtgggagaa
      661 gaggagagtg acgggctccc agcctttcac cttcccttgc atgtgagttt tcccaacaag
      721 cctcactctg aggaatttca gccagtttct ctgctgacgc aagagaactg tggccatagg
      781 actcccactt ctcagcacaa cacaatggta ggtttgctaa cggtctattg tgcttacgtc
      841 cattctttga attctgcctc tacagtcctt tggcatccag atctgtactt tatggagtat
      901 acaatgtgca gttacacgta cagaacacgc tacaataatg tgaaagctct gacctagctg
      961 ggctaccttt accctccgct ccacatgcta aatcactcac agtgcagact ccactcttcc
     1021 tcacctttgc ctgctggcgt ttaggctgct aattttttag ccacggtgat gtgaatttga
     1081 agcgtatg
//
LOCUS       KCKM01002838             805 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44521apa ultra-conserved element locus
            uce-7064, sequence.
ACCESSION   KCKM01002838
VERSION     KCKM01002838.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 805)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 805)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..805
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44521apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>805
                     /note="ultra-conserved element locus uce-7064"
BASE COUNT          223 a          142 c          183 g          257 t
ORIGIN      
        1 aacttacatg aagtgtatag taagatacta acatgtatga aattagtatt ttataaaata
       61 ttttattagt ttctgtaagg ctctatactt gctgccaaga tctaaatttt tttgcagggc
      121 ttactctggc ttaagtcttt taactatggg tatttggggt tttctttttc tgtgttttac
      181 ctgtgtatgt acaaggcaga gaataagaca cataactgcc ctaattgtgg tgagattttc
      241 ctccatctcc atcaggacct atcctgttgt agtatttaca tttaagaagg caatgctgct
      301 tcaccaaact tcctcctaca gtgagcgaag tagggataac tcttggaaaa agttttgagg
      361 ctagtgacaa aatatgtttg tctttcagat ccccagctca agggtatagt gaccaggtta
      421 tattgcaggc aaggctacta cttgcaaatg caccccgatg gaagtctcga tggaaccaag
      481 gatgacagca gtaattctag taagtgactg ccccagggga atgtcttaat cgcacacgca
      541 gtttgcatcg ctcgagtgtg tacgcgcaga cacagtgtta atgcctttgg agggtttctg
      601 aatgtgtttt gtcacaagga ggaggggtgt gtccattcaa agcctaatga ctctggcacg
      661 gctcgtgcag aatgttggcc taagtatatt ccctctgaag gggaaggtgt aagtgccgat
      721 ggacctcaag ggtgagatat ttaggccaac agttgtcttc tggaaatttt ataaaaattg
      781 taaaattatg ttaaatatat tttta
//
LOCUS       KCKM01002839             523 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44536apa ultra-conserved element locus
            uce-4977, sequence.
ACCESSION   KCKM01002839
VERSION     KCKM01002839.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 523)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 523)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44536apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>523
                     /note="ultra-conserved element locus uce-4977"
BASE COUNT          140 a           93 c           91 g          199 t
ORIGIN      
        1 tttagtattc tgcatctcca attttaaagt ttaaatagat ctatactttc cccaaggagt
       61 tatgtgcaaa ctaatattaa gattaaaatc ttttatgttt gttctgtagc ttgaaacaga
      121 aaactagtgc atagcctgtt ttatcccact ggctctctaa ggttcaggta ttaacataaa
      181 tacagcccat taacacttgt tcctctctgt caggacataa attaagtctg caggtgttcc
      241 atgaagcttt acccttggta ctaattaagc cttgataatt aggtttgtta aattcaggcc
      301 tttaagctta tattccctct ttgggttgcc aaaatgggga tttgcaatct acaaggcctg
      361 tttctgcagg ttttctgtgg gttttttgga tttgtttttg ttttcaacga aaccgcagtt
      421 gtaataaact ctcctttagt taggtggtta aagattcaaa acctgtgaag aacttggata
      481 tcaccttgta tttacatcag aacattttct tttgctggct ttt
//
LOCUS       KCKM01002840             831 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44551apa ultra-conserved element locus
            uce-876, sequence.
ACCESSION   KCKM01002840
VERSION     KCKM01002840.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 831)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 831)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..831
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44551apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>831
                     /note="ultra-conserved element locus uce-876"
BASE COUNT          271 a          144 c          165 g          251 t
ORIGIN      
        1 ttttctgtta ttaaaatacc tctcaatgca agaactgcac tgcatgttat ttaactctta
       61 ttacaataat gttaatgtct aaataaaagt aataatgtga tgtattgcag ataggggtgt
      121 ttacagcttt tacatactgt gaaaatcctg caatgtatta aaagaactgt gcatttttct
      181 ttttcaatct gaagactgag gagggggata aagaacctta atattcagtt tttcttttac
      241 cttatttctc actagcatat tttgtaacat gtacagtttg gaagtttata caaggatagt
      301 ttatatatta ttttagctag acatagaaaa gtgaaacact aaacagatct tagtgcaatg
      361 cagaaatagc tctaaggttt tatgagcaca taagagacag acaaaaaagg cagctacagt
      421 gtatatacac agctatgcac agaagatttc ttaccataaa ttgcacattg tcaaatccat
      481 tagccagcaa gtgattttca tactgaggta gcccaatatt ttccaaccat tgtcccacag
      541 tctggacagg gcatcggggt cctgtaggag ggtgaagagg gaggcgttta agcaacgaat
      601 aaccatccac tggataatag cggtagtcct gggctgagag gtggcattgc cacatcgtgt
      661 tcctgggaaa gttggtatca aaggagcccg ccagcttgac agattaatgt tttcagcaag
      721 cagaaaagtc agaagtaaaa catagtttac agggcagtat aaagcgtaag atctgatcct
      781 agctctacat ttcttagtta ttaatcttta ctaccgacca gtacgtcata c
//
LOCUS       KCKM01002841             796 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44566apa ultra-conserved element locus
            uce-2282, sequence.
ACCESSION   KCKM01002841
VERSION     KCKM01002841.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 796)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 796)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..796
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44566apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>796
                     /note="ultra-conserved element locus uce-2282"
BASE COUNT          247 a          173 c          171 g          205 t
ORIGIN      
        1 aaaaatcacg tataaataag caagcagcca tagattgttt caaaaataag aatgctggac
       61 acacgagagc tagagggtga tgaagaggac atacgcaggc aatgccagct cagccttaga
      121 aatccttgta acagattctg atttgctcat ctctcctgct ttcatttttc tcctgtcttg
      181 ggcgaaaggt ttgtgtttaa taacatcatt tgcatcagtg tgtcccaact gaccaaggta
      241 ctagggctgg gagagattag catggtaatc tcattctgat ggataaaatt agcaaagata
      301 ttcccctgaa tggagagctg ccattggcga gctgccgtgc ttagaatcaa ttactaaatt
      361 actttgagct ctaagtcgac agtaacagaa aaaaattggc atcgaccgaa gtgaaataag
      421 ataaaaaata tgcgatcatt aaatctctcg ctactattcg cgaatgtgac tcacaagaac
      481 tgcacaaaaa ataaggcaga atttaatttt taacagtggt ccctgtcatc atttcaacca
      541 gagctgctca gtgcatggaa gcacagctca accttgctat ccagctgctc agaggaagac
      601 ctgggctgct ccagctccca ccctgtgctg agcagggcac atcacgagga ccaaaagcca
      661 gaagacagtc ttctgtatgt gcaagtagag cagcatggag aaaggctttg ccaaggcata
      721 aaaccttcct tcatactgta atttcctgct ctctgtgtaa gcgttttgta tgtgctcaac
      781 actttgcaag cacaga
//
LOCUS       KCKM01002842             996 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44582apa ultra-conserved element locus
            uce-4292, sequence.
ACCESSION   KCKM01002842
VERSION     KCKM01002842.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 996)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 996)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..996
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44582apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>996
                     /note="ultra-conserved element locus uce-4292"
BASE COUNT          324 a          192 c          144 g          336 t
ORIGIN      
        1 agaatacgga atatgctaga aacattaact tgctatccat atagatacgt atcattgtga
       61 tttgcattgc ctaatgaaga agtaacactt tcattttctc tagttcaaat tactgtgaag
      121 attttttctt attatttgaa tcagttaaac agctcaaagg caagttttct ccactcttag
      181 ttttgaataa cacagaaaac tggctttgta cccttgggct acttggattt aatatcagat
      241 tcttaccttc cacaaggtca gaaaaaaaaa taaagcttat aaaattggac tcatatgaag
      301 actgactttc tatcttttaa tactaccaaa caatctgcaa attatttaaa ttaagacaac
      361 ccgcactcca acatctgcaa gcaaaatgct taaatgccaa atgcaacttt actggcataa
      421 gaaaataata agtggagttc aatttgtgtc agcatagctc aggaaaataa gatatcatgt
      481 cttgctgtct gcttgatgtc agcttctcag attcaaaccc taatgcctca tcttaggctg
      541 tccttactgg aggctgccaa atagcaaggt tcagccagag ttcatgcagc tactacaaaa
      601 tagctttttt ttcccttctc ctttttcaat cattatgaac cttctgcttt atattgtaca
      661 cacttgatta tatctatcct tgaaatgtat acaactctat tagccttttc tcctattctt
      721 ttaacatact gtaaattcct ttctgtgctt agtttatttt atagcttaca gaattaggct
      781 tttaaacttt cactgcacag aagagattaa gttgtgtgat tggttacaag aagaaaacaa
      841 aggaacagga atttatatta ctacaaaaaa aagtatgact acttttccca ctttgtagac
      901 tcttgctact tttctactaa aatattagtc accatcataa ctaggtccca aaatatctgg
      961 aagctggtta gtcctaaaac gggaagatta gcacct
//
LOCUS       KCKM01002843            1101 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44597apa ultra-conserved element locus
            uce-1780, sequence.
ACCESSION   KCKM01002843
VERSION     KCKM01002843.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1101)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1101)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1101
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44597apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1101
                     /note="ultra-conserved element locus uce-1780"
BASE COUNT          316 a          219 c          223 g          343 t
ORIGIN      
        1 tcattgaaag caactgtctc aggggttgaa tgaaagtgat atttgccaga attagcagct
       61 aatagtgact atgacttgtt ttgcatactt ttgtgaatat attttatatc tcaccttatg
      121 cttagagact ctgagtttct gtttgtcgtg atgagctcta tgtctaacac ttgggttgag
      181 cccagattcc actcttactg cagcacttca gcaaggacaa ccttttagcc ttccctggtg
      241 agaacaatat ttgctttctt ataggctgaa tttacatact ttttctttct gtgtgcatat
      301 gtgtgtgtta tgatgggaag ttttaaaaca aacggagtta tccccagctg ctaagttctg
      361 acatgcactt taaataagta aacccaggga tgtggcaggc tatgaaggaa gggagactaa
      421 aatttgctta cgtgttgcac tgatcacaga attatcatct gctatcacac agtttaccat
      481 tagacccagc tgctgccaac ctgaccagtg catttcttca agctaagcta acaaagcact
      541 tatttgttat ccagggaact acctctaata gacttccagt gaaataatat ttgctttcca
      601 accctacttt gaatcccact cactttgtta aaaagattgc ctctggctgt ctccgctggt
      661 ctaatctaat agtttctagt ttgtacaagc aaagcgcttt cagccaacta tataaataac
      721 ttaaagagaa gaagacactt ttacagcact ctgcgccggg tgctatagaa catgacagat
      781 tagtaaatga cgcctcagtg gagctcatct gggaacctct gtcagttgaa tatgagcaat
      841 tacaatattg tatttgggct gaaagggttg tctgtcttct tacaaaaagg ctaacaagaa
      901 aaataattcc tgtcttactt ctcctgtgca tgaaaccgat ctaagtggct ctagcccttt
      961 ttctcttccc ctcccattgc cgtcacagca gcaggagggg agaggagggg aaaagtgagc
     1021 acggagagaa aagagagtta ttttctttct gttttcactt ttggttggaa ttgaaaatga
     1081 agaaagaata atattaggag a
//
LOCUS       KCKM01002844            1035 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44613apa ultra-conserved element locus
            uce-2238, sequence.
ACCESSION   KCKM01002844
VERSION     KCKM01002844.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1035)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1035)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44613apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1035
                     /note="ultra-conserved element locus uce-2238"
BASE COUNT          321 a          183 c          197 g          334 t
ORIGIN      
        1 tcatctgggt aatacatcat cctcattttc gatgtgattt tgggatacct taatagcaga
       61 ataaataatg caatcagttg ttttttatca cagttaaata tattttattt ctattatcaa
      121 aagaaattgc aaagatatag aaatagactt cctatctttt ttcccttgag ctaaccagca
      181 caaggccaca gttcgtgctt ctgggtcatc ttggataaat acaaacagta acaaagaata
      241 ataatacaat tatttttaca tttatttccc ttcagatgag agacaacagc tgacagactc
      301 taaaatagtc agtatgcgac acagttgaaa tttagtcgtt ctctgtgcca caaacggtgt
      361 gtaaacaagc ttttgtatca caagcaatgt ttttctggta cagttaactt atttctctct
      421 ccttaaacta gtttgtcttt atgctttgaa tgctacagta atttctttaa tcaaattgat
      481 ggaagtccct ttcccagccc acactgaaac caatttattg gtcatgatac gccagctatg
      541 ttgctaacag tcgtaacgaa ctgtcaggca atatcgcagt gaagctaatt tgaagtcatt
      601 aggtgtgcag cattcaggca acaatttgtt acagtggtta ggaacacagc tgacatttct
      661 gaatggcttt gttcagagca gttctagatg agcccaagca aattgtaaac taatttaaac
      721 atcactctat attatactag ctactttgtc ttacactggt tgctaataaa gcaccccaaa
      781 ttaagtcaga atgagttaaa tcagtgagtt tgagcttcat ctttagaaga tacctacacc
      841 aacttaacca aaatagagta gctctcagtt gtgctccata gtagttgcag ggaacgtttg
      901 ccagtttgat ttgtgaatat gctgtgtagc tttgatttga ttggaggggt aggaaaagca
      961 gagggatgag tctgagcaga cctgaaaatg atggctttgg ttagtgtgga aaaggtacta
     1021 gatgctgtaa actgg
//
LOCUS       KCKM01002845             800 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44629apa ultra-conserved element locus
            uce-6671, sequence.
ACCESSION   KCKM01002845
VERSION     KCKM01002845.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 800)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 800)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..800
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44629apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>800
                     /note="ultra-conserved element locus uce-6671"
BASE COUNT          257 a          141 c          155 g          247 t
ORIGIN      
        1 ggggaggagg aatatatctt gtattattat tcccacttgg gagttgtctc agggtggaga
       61 agtagtttgt gttggctggc ttatgtgatt aagtctgaga tccagctatt gcattgtttt
      121 cttctgaagc aagtgaatgg cagagggtac aggcactagg atgttacaga actagtttcg
      181 tataatccct tactaaagtg acaagaagga acagaaagaa ctttaaacat tcaacaataa
      241 aggagagatg atttgacaag tcacagttag aaccacaaag atcgttcctc taacatttga
      301 gaaaatgaaa cctacttggt actccttcat caccatgcag gcaccctcaa ttaaagcagt
      361 gcccctgata gcaggcaata taatctgcat tttatttcac tcatgagcaa aataacaagt
      421 tactcaggcc tgcggcactc atgagtgata tgggccgtgt aatatcctct ccattgagtt
      481 tcctattatt aagcttgaaa taaagagttc aaaattaact gtgacaatga ttttatctag
      541 cattggcatc gccattagct tctgcagttt actgctaata aaactttaaa tttgctatta
      601 cttgtaataa ccttttggcc accttagctg tagaaattag acaaaaagcc ctgccaaaac
      661 atcactaatg acatttttta gttgcgtgga agaatttacc agaagtagtg gctgttactt
      721 acaaagtatt aatacaaaca agtaaaatat ttgggatttc agctatttaa tttgaagaac
      781 atgcttcttc gaattttgat
//
LOCUS       KCKM01002846             218 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44644apa ultra-conserved element locus
            uce-4541, sequence.
ACCESSION   KCKM01002846
VERSION     KCKM01002846.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 218)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 218)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44644apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>218
                     /note="ultra-conserved element locus uce-4541"
BASE COUNT           56 a           55 c           65 g           42 t
ORIGIN      
        1 gtggccccgc tgcggcgcgc cgtacagttc cccgcagcac aaaagcggtg caggcgctgc
       61 cgctaatgta gtcagtaaat aaataaagga gggcttaagc ttagtgtaca gcaatcagtc
      121 gagaactaca ggataattaa cacagcgggg ggctactcgg caggcaggtt taaatgaacg
      181 agttcacttt cattgaggcg cactcgtggg gctccccg
//
LOCUS       KCKM01002847             544 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44659apa ultra-conserved element locus
            uce-5904, sequence.
ACCESSION   KCKM01002847
VERSION     KCKM01002847.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 544)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 544)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..544
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44659apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>544
                     /note="ultra-conserved element locus uce-5904"
BASE COUNT          197 a           78 c           99 g          170 t
ORIGIN      
        1 agcactcaaa tgtaagtgaa aaattaaaag gttgttatat ttagaaatag ctgaagccat
       61 acactcgata tatgttgctc acagtgggga acgagcataa aaaatgaggg gggaaaaccc
      121 atctactttg cagctatatt cattacttaa aaaaagattg ttaaactaaa tttggaaaga
      181 aaaaaatcaa accttcttta attgtgttta cccaaaagcc ttttcttcct aatttaaata
      241 gcataaacat ctggactaaa gcaatattag aatcatggca gtagtcaagc aaatcttgtg
      301 gaaaataatg aaattagatc cctggtgttg tgacagagta agggcaggat acatcagttc
      361 gatgttaata aaatttccat gaatgactga atacaattaa gaaattgtca gttgcggcaa
      421 tgaacttttg tagctcatag atgtttgcat catttgatta tgctggcaat ttaaaattgt
      481 ttgttagtgt ctgtgttggg atattaatta tgacctttat tacagcccac aattaaacta
      541 gtca
//
LOCUS       KCKM01002848             967 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44675apa ultra-conserved element locus
            uce-3263, sequence.
ACCESSION   KCKM01002848
VERSION     KCKM01002848.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 967)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 967)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..967
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44675apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>967
                     /note="ultra-conserved element locus uce-3263"
BASE COUNT          254 a          225 c          203 g          285 t
ORIGIN      
        1 gaagatgcaa tctctcacat gtactcctct ctttacttca ctttcccttt ttacaaaaac
       61 tgttgcatca aggaccctag ctggagactc gcgcagcccc ctgtgaaacc tgccttctca
      121 ctcccttttt ttggtgtgat tcaggacttt ggagtcagca aagactgagg agccccccct
      181 ttgctgtaat aagaaacaga cataaagtcc ccctcttgtc actacaaccc tcttgttttt
      241 atttttccta caaccccttt gaaattgatg cagtctgggc aatagatgca gtctgaccct
      301 ttggatgtaa tttttgtatc ttcatttttt tgacaattgc ccctaagagc cccgaatagg
      361 ggacaaaaag cgttggagga cctgaaactt ttacctgaac ccaggttctc cggcgcttca
      421 caaccaaatg gggctacaga gaagcgtcta agccagttca cagagcgagc gtgtgtgggg
      481 acttctcgct gccatggacc cttgatgcat gctccccgcg ctccagtggt cccgtgtcag
      541 agggcggagt tttcgaaagg aggccgccaa aaataaaagg caaagagacg ggatcggctg
      601 cagcggtttc ccacaggagg agggagtgtg catcggtctg gtaacaaaca gagaatgttt
      661 ctctctttaa aacaaaaaaa gagaaaggaa atcacaaaaa tctgtgtttt atcttggata
      721 ttttcagaat attcttttta aaatgcagat tttttttttt tttctgagct gttaggacat
      781 ttactgtaat atcatgcttt taagaaagtc tgtactgtag taaatagatg cttttggtac
      841 ttgaggtact tttaccgaag cgttgcacta acatttactt tgttcctgtc ccgtaagttt
      901 accaagtctg tcctcccata agacgcgcag ccttgatcta catttaaaaa ccgattcgcc
      961 tacaaag
//
LOCUS       KCKM01002849             570 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44691apa ultra-conserved element locus
            uce-7741, sequence.
ACCESSION   KCKM01002849
VERSION     KCKM01002849.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 570)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 570)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44691apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>570
                     /note="ultra-conserved element locus uce-7741"
BASE COUNT          189 a          105 c           91 g          185 t
ORIGIN      
        1 tttttctgca tctcagtggt gctctgcggt ggccaatgct catggccaca ggaataaaat
       61 aaagcaggtg agaaacacaa aaatctatgc agcatgaaat atctctgaga gatttgttta
      121 gcgaaattaa ctagtagttt aatagaaaaa aagcttgatg tatgagagtg ctccaatttc
      181 ttcatagaaa ttaacatttc aatcctggtt ttatctagaa gtcattaaat tgtgcaacat
      241 gaattattgg aactgtagca gagaattaac tctattcatc aagtaagtcc aaacagttta
      301 gagtgcatct gtaatgaaaa aatagctcca catttctatc tcttctcatt aaagtaaacc
      361 agttttccct ctctcagtat ataaaactgt cttctcctca tgtaatttat attaccataa
      421 gccagctcac attctaaact attacacgcc tccaattaat ttttgcagct tttgcctgaa
      481 aatttaatga gatagtagcg tatgaacctg ctgactccag attacgtgtg cgcttccaat
      541 attaatgttg gcataataaa ataatctgat
//
LOCUS       KCKM01002850             406 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44707apa ultra-conserved element locus
            uce-3810, sequence.
ACCESSION   KCKM01002850
VERSION     KCKM01002850.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 406)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 406)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44707apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>406
                     /note="ultra-conserved element locus uce-3810"
BASE COUNT          119 a           85 c           67 g          135 t
ORIGIN      
        1 actgtgttgc tgaatgggct tccagtgtag ctctttaatt tcatctcttg gaaatgtttc
       61 ttctctttca tcccacggcc tttatcttaa ctcctgatct gagcaaagca gcagcctttc
      121 aaattgaaca aaccgtgttt caaataggct cttctgcttg tgacaagatg tacctcattt
      181 tctctgcaag ccctcagcaa ggtcacacct ttttaattta ttttctgtaa gaaaaatcta
      241 gttgcatgat agaacaaggc cagatctagc tagaggtcat ttcttgaact agtcataaag
      301 tagaatagga ttagaaccat ttaatatccc agaacttacc aagcatagtt ctattaaaat
      361 gtaggcttca tatttatacg gcaacataaa tagctgtcaa ttcagt
//
LOCUS       KCKM01002851             846 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44723apa ultra-conserved element locus
            uce-3470, sequence.
ACCESSION   KCKM01002851
VERSION     KCKM01002851.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 846)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 846)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..846
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44723apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>846
                     /note="ultra-conserved element locus uce-3470"
BASE COUNT          252 a          170 c          190 g          234 t
ORIGIN      
        1 ggaaatgcaa agaggtgaat tagccctttt ttgtacaagt tcccacctaa gagccatctg
       61 gctccattgg gtcctggcca cttgagttgc ctgggaacct cttgaattct tggggcagag
      121 aggtgagggt ggtgtcaggg gtgacccttt actgtggaat ataggtacca gcctcagctt
      181 aatgtgatac acttcgggcg ctctccgaag tgggatgttt acccaaccta cctgaggcag
      241 tcaccgggag ggaataaaaa aaaagaaaaa ggagtgataa taaaaggttg attaattatg
      301 tgcaataact aggacagcat atcatgaaaa ttccattctt gtttactcag ctaattcact
      361 ttttatgagt gtttaggctt taaagcaaaa caaagcacta attacccaat taacgagcaa
      421 ttaagttact gcagcctaat agcctgtaca gtggctgcct ttatgagtct gatggtgagt
      481 tagagaccca ttaaacaaat ttatacacag ctgtagcaaa cattacattt ccagagatgt
      541 tacattacat gctaatattt tcacagcctt gaaacatcat tcactggttt agcgaatcga
      601 gtttgcccga ttccttagcc gaggtctgac aaagggaagg tctctcccat tttcccagca
      661 gctagtaccc aggggtacaa gaggagcggg gctctgtatt tcaaagcctt cctgaaaaat
      721 gaggtgactt ttaaccaaag agaggaacat ttaccttaac acttttaaat tttgccttaa
      781 tttagggaaa aagcacagtc cctaagatgc tctcagcagg tgacgctgta ctggaagttt
      841 taggat
//
LOCUS       KCKM01002852             980 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44739apa ultra-conserved element locus
            uce-6730, sequence.
ACCESSION   KCKM01002852
VERSION     KCKM01002852.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 980)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 980)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..980
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44739apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>980
                     /note="ultra-conserved element locus uce-6730"
BASE COUNT          255 a          220 c          200 g          305 t
ORIGIN      
        1 tacatcgagt agaatgattt tttttaattt tgtcacagtt taaatagcaa acaccctaac
       61 tcttctgttg ttgcaaggca gatgtaacgg tgttgcatcg tggtgatttc gtagtaaatc
      121 agatttcctt tttttcatta aaaaaagaaa aaagtaaaga ttaaagcaga tgtagtttga
      181 taaatgagaa cagtttgtaa atgtgtatgt atgtttcata tatgtcttca cataaacaca
      241 cgtacgtaca aatttatcag attacatctg cttttacctt taaattttta tgaacacagg
      301 catatggcac attttcctgc cttggatttt ttgtctgcac agacaggctg gcttggcact
      361 ccatgagcat acacagcttt aagtatttag ctgagaaact ctgttggaaa ttagagcatc
      421 cgtgcttgca gagctctggg tgatttgacc tcccaggggg tcccccgtct ggcccctggc
      481 tcaccatgcc atgaatacat ttccatccat ctccagcccc catcacctag gcagctaatt
      541 cctttgagcc ccctccgcct tattaaagtc acagatcact ttaccaagct taatactgtc
      601 agggccagca gagcaagagt tcagacaggc tcaccacaat cccagctttc attagggtgg
      661 gttttttttc tttttccttt tcgtgttttg atctgcacaa ctcctagcaa tgagctgtag
      721 ggtcgcctcc agattccttc agtaaaccct tggcatggat acaagtgccg tcacagctgc
      781 tgcaaaacct gcttgcaaag gcagcagcgc tgcctgtaat aggaaaggac ttgcggcaca
      841 ctgaaagtat ttttcatcag aggggtgtga ggctaatttt ttatttggag agcacttttc
      901 ccctctacag tctgttttgc ctcccctgtt atgaaatatg gatggtacca gttccagcgt
      961 ttggagacta actggcagag
//
LOCUS       KCKM01002853             931 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44755apa ultra-conserved element locus
            uce-6085, sequence.
ACCESSION   KCKM01002853
VERSION     KCKM01002853.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 931)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 931)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..931
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44755apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>931
                     /note="ultra-conserved element locus uce-6085"
BASE COUNT          277 a          205 c          171 g          278 t
ORIGIN      
        1 tctccctctc attctctgct ataaggctac cagctgtact gagtcccatt ataacacttt
       61 cctcacatgc tattatgtac tgctttcttc aaaaagggaa gaagggtaga agggagaaag
      121 agaggtggag cttggtatta ttctcgacgc acttccctgg ccactacttc tcccttttgt
      181 ctttctgatt ttttggcagg ggatgcgagc ggcacagctc tagtgcaact gagaccaaaa
      241 ataaaataaa aaaaattggt gccgagaggg ttaaacctat ttaaggggtt aaatatgcaa
      301 ttaccgctga ctaaaaccag agagacatat agataaatag aagaaatgaa gtccccaggt
      361 tccattcaga agccttcatc acattactac cagacagaaa actctttaag taccattttc
      421 agatgttaaa tcattgttcg tgcagcacat attctcacta ttcctggggg aacaatatct
      481 gaagacagcg tgctaacaaa tgcaatccag taaacaggca tttttcctct tgttgttagt
      541 acctttgtgt tccagctccc agctctgtca tccatgcctt ctctctgctt tgaagttaaa
      601 gtactgaatg agcgttgtca tctattatcc agagtgtgca tgtagattat aaataagaaa
      661 taaaagtgac tttcagtaca ctgcttttgc attagcaagt tgccttctct gttacctcct
      721 ctgtccttca tactttgcta ccaacattat attaaaaacc cgactgtaag tgtttctcgt
      781 agaatgctat aaaatatgta cacagcggag acaaaagttt tattgaaaca aacaagtcca
      841 gcagtttaac caggttcatg agttcagctc caacagactg tttaaccctt atctgcagat
      901 gtccttcagg tccccaacgc attaattgca g
//
LOCUS       KCKM01002854             248 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44770apa ultra-conserved element locus
            uce-2827, sequence.
ACCESSION   KCKM01002854
VERSION     KCKM01002854.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 248)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 248)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44770apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>248
                     /note="ultra-conserved element locus uce-2827"
BASE COUNT           49 a           71 c          100 g           28 t
ORIGIN      
        1 ggtagagaag ggggcccggg cagggcggag gaggaggaag aggaagagga gcgcggcccg
       61 gtgccggccg ctatggacca gtgcgtgacg gtggagcggg agctggagaa ggtgctgcag
      121 aagttctcgg gctacgggca gctctgcgag cgcagcctgg aagagctcat ccagtacgca
      181 ggcgggctgc gccgggagat cctccagacc gagagtacgt ggagaccctc ccccctccct
      241 acaccccc
//
LOCUS       KCKM01002855            1158 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44785apa ultra-conserved element locus
            uce-5178, sequence.
ACCESSION   KCKM01002855
VERSION     KCKM01002855.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1158)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1158)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1158
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44785apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1158
                     /note="ultra-conserved element locus uce-5178"
BASE COUNT          333 a          254 c          245 g          326 t
ORIGIN      
        1 gcccagccta tattcatgcc agtcttgtac tatattgtaa gaaaaaggaa aggagcagct
       61 cagaagtctt taattattcc tccagccatt tattgacctg ctctctaaag gccatatacg
      121 ggccttcatc tgcatgcaaa attcctattg acatcactgg gagggccaca ggcagatcga
      181 gggtacttcg taaaccttac attttaagta tgttgtaaga ggaaggtgca gaatttgcag
      241 tcctttaaaa taagtgagca gctttatcta atattgctct ttaaacatgg agtttgaata
      301 acatatttcc tagcaataat atccctcctc ttccccacaa gctatctaac ctacacgttt
      361 ctgtaaagtc ttcatattta acactcaaac aaccgatgtc cctatagtat aaacaggata
      421 gataatgaat ataagtggga tagaaaatta atcctacttg cgaggaaaga gagtcataat
      481 tcacttaggc ttctcagctc ttacgttatg aggtcttcag ctaactcatg ggatccattc
      541 cacatcccac agatgctcat tatgaattct ttttatgtgc aacatgtggg gactaaccag
      601 tttcatatct cctggtatta gctgcaatcc aaagcatttt gtattaaaat ggaatgcaaa
      661 cacagatgct atttaataca aaggatttga atgcagtctc tgttttaaca taaagttggt
      721 gtgtcttaat ttggtttgta acagcaatgg agagaaaagt caagataaga ggatattgtt
      781 agattaggag ccaaactatc attccaagag gcatgcaggt gcatgggaaa aggggagacc
      841 ggcccaggtg acagctttga cttatggaag caaaggttac aatgccttcg gggagatggg
      901 gcagcctggg acatctgctc ccttcagaga tgctgccaca gcctttccaa caccaggcat
      961 attctggagg gcaacctgtg ttctgtccca tgcaactgct cttggtatga gcctcgtttt
     1021 cctcagaaag gagccaccag tccagctgct gtttgcgtaa ggtgcactaa gacagggtgc
     1081 tacttctcct ctagctgtcc actcaccagg ctggcgaagc gtccaggtct ctgccgcatg
     1141 caagacactt ctagctcc
//
LOCUS       KCKM01002856             922 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44801apa ultra-conserved element locus
            uce-4237, sequence.
ACCESSION   KCKM01002856
VERSION     KCKM01002856.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 922)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 922)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..922
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44801apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>922
                     /note="ultra-conserved element locus uce-4237"
BASE COUNT          231 a          206 c          200 g          285 t
ORIGIN      
        1 agcttcaaaa catgaggaga gcccccaact tcgaaggagg aacacattga cgcagcgcat
       61 ttcccacttt gcaaaaagcc ttttctttcc cttcccttgt catgacaaaa aggcttaatt
      121 tttttatttt ttcctttttt agccaacgta aggaaggagg gaagaggggc agagtcgtta
      181 aaatgcagtt ctttcaatta cgtcccgtta tttgtcatct ttattgcttt tctatagttt
      241 ccattgcacc tttaatagta cgcctggtca gaaaaggtga gctggaatgt gaacacactt
      301 ggctgccgcc agcgcctacg agctgtgctc gaatccccgt ccctgtagat tttaatgtcc
      361 ccgcagactg ctggcagcct gcttccagct gtggcaggca tgatgcagtg aattgctttt
      421 gaatgttctt tactcaaata ggcagtaatt acaagcttaa agaggtttag tggtccagta
      481 aactacataa tcacccctga attagcctgg gctcatcagt tgcagtccag caacctccag
      541 actgctgttt gtatgcaggc tttatcacgt agcaacctga gcagcaggtg tggaacagca
      601 agaatccccc ataaacacaa ctgtctactg gggacaatga tctctaatga gatgaggcta
      661 cagcatcact gtaatttaag tgggaaaatt aacgccggag aacgcgcgct acttccaaga
      721 gtctccgctt cttcggagaa cggcagtgtt tgctggatta ggtttttttc ttttccctcc
      781 caattttttt tccctcccgg atctttaaat gctttttttt ttatggagaa cacattgtgt
      841 ttttgcttat aagttgagtg ggcttcattc ttttacaagg atatgttgtg aatatttaat
      901 ggtggacgag gcatctgctc aa
//
LOCUS       KCKM01002857             821 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44815apa ultra-conserved element locus
            uce-4856, sequence.
ACCESSION   KCKM01002857
VERSION     KCKM01002857.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 821)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 821)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..821
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44815apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>821
                     /note="ultra-conserved element locus uce-4856"
BASE COUNT          245 a          135 c          175 g          266 t
ORIGIN      
        1 ggggacaggg tgcttggtca cttccctcga gtatcatcac gataatcttc atatttggct
       61 aaaagaaaat tggagacgcc tgttcttagt ggagaaaaag aaaatacaaa tttcaggagc
      121 agagggaagg agcgggaggg gattgccttt ctttgcatta atagaagatg aagattaatt
      181 ctgctagcag gattccggca tcttgttgga attcagtgat ttttccattt tggatcagca
      241 cggtgccaga atgtaaatcc tattgccttg tgtctttcaa aataaaatca aaaagccttg
      301 ctgattgctt atatgggcag ctagcacacc ttaagaagta agaaaggttc agacaggaat
      361 ataataaggc ccaggaaagt ggcagcatga aagggatgac ctttatttgc aatcatagct
      421 gagatttaca gtttattact gatagctttt ataaagagcc attcagttca gaggtgagag
      481 gtttgtcatc tggaaatgca attaacttta gccttatccc aatccccctg gtcttagtgt
      541 gagagcagca cttcagcaat atcatgattt cccctctaat ttcttttttt tttttgtctc
      601 ttatattcct tgttctttgg cataaatgca ggtgcatggt tttttgctgc tattatttca
      661 ttattattag atgcaccttt gaatttttta ttagatccaa cttgattttt gaatgagaag
      721 atttcaaaga agagtgacat ttaaacccga gaactaggat aactcgtgga agggaattgt
      781 gctatatatg tcaaaaatta attacagaca tggagaatct c
//
LOCUS       KCKM01002858             870 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44830apa ultra-conserved element locus
            uce-7914, sequence.
ACCESSION   KCKM01002858
VERSION     KCKM01002858.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 870)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 870)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..870
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44830apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>870
                     /note="ultra-conserved element locus uce-7914"
BASE COUNT          202 a          178 c          227 g          263 t
ORIGIN      
        1 agaccactca gatcttcatg tgtccccagt atccgctcat ccttatgctt gtgcttatgt
       61 ttgtgtttcc ttttgtggag tcggccactt gaaaggcttg ttcctgcaac ctttggagga
      121 gccagggagg actgcatgtc cccaaggccc attcccacag gtgtctgtag gtgtactccg
      181 tgttttgctt tatgcttggc agtggtggac atcttcatat gagagcttgc atggaattgg
      241 ggtgggggca cggtaggtct cataaacggg gaagccgctc cgagcgtgtg agacaggtac
      301 aaaggagctg gatactgacc atagtaacca agattcatca taggcattga tgtgtaaggc
      361 attccatagg gtgcatagta actcccactg ggaatagggt aaccgaaccc ttgtaaaaaa
      421 ggcacctttg tcatggtgtc attggttttg gcaggtctac cacgcttctt cttagacttc
      481 atgtcagagg tcctgcgaag atagagcaat gggtcatact ggatatatgg catagggtag
      541 tagtgatcaa aattaatcct gaagatgctg ggatatggat tttcatgata aaatgtgtaa
      601 cttctatggg aaatcctgaa cacttgaaac ttattgatga gttcctcaag gtctgccaga
      661 aactggaggt catctctgtt ctgcaggctt ttccttttcc tcttgtgctt tggcttttta
      721 atactctcat gagagagaaa gttatccaca attagatgtt tctgccggtg accatgcctg
      781 ttctttgtgc tggtgtcaga tgggatagcc tctggattgt ccagggtgca gaaatcaaag
      841 gagtatctcc gtcgggattc tgagcttttc
//
LOCUS       KCKM01002859             893 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44845apa ultra-conserved element locus
            uce-7790, sequence.
ACCESSION   KCKM01002859
VERSION     KCKM01002859.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 893)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 893)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..893
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44845apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>893
                     /note="ultra-conserved element locus uce-7790"
BASE COUNT          326 a          140 c          161 g          266 t
ORIGIN      
        1 aggctcttgt taaaaaaggt cataatatga ctagtcatac ataattattt gtgttaatga
       61 aatacttggc tgcatttatg gtccgttcgg caacaagtat gagtctgata gagacaaata
      121 tgtttttcag tgtggattta catacattta tggattagaa tcaggcattc ctccttttat
      181 agtcagtgta ggtttaacta ggttaaaagg ttttcctgaa tattcatcca gacatttctt
      241 ttgaaataag ctgctggttt aagcaaatta aaaagtacat aaaaactgga ggaggagaag
      301 cgagttgaaa agaaatgaaa aactaagtat atttaagttt tatggcttac aaacccccaa
      361 atttcagagc tttgtgaaat taaaaggtta gctatgaata accacaatca aatcttttct
      421 tttgtccata tttaattcaa atgagattgc tccatattga cttctaatgc taaaaggcca
      481 cccatcatgg aatccctgca gccaatgaag caagcaagtg aatgctttct taaatgatgc
      541 taatcagtcc agagaggcct gccctctatc cccatcagta ttctgtaatt cagatgtgct
      601 gataacctga aattgaatgt gtcagtatgc agacatgtga agaaaaaagg aaactaaaag
      661 gcaaaagagg cagctataga gacaatgcct gtttgatttt tttcttccaa gtgaagaata
      721 aaaagaatag ttggtagttg ttctcaaatg cttactggag ctatacaaga acatagagag
      781 aattcataaa taggctagac agtcaatttt caaatttcca gattgagaga gaattaataa
      841 agaacaaaaa aacaacaaac cctagacctc caaataaaat acattttaaa atg
//
LOCUS       KCKM01002860             533 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44860apa ultra-conserved element locus
            uce-360, sequence.
ACCESSION   KCKM01002860
VERSION     KCKM01002860.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 533)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 533)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..533
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44860apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>533
                     /note="ultra-conserved element locus uce-360"
BASE COUNT          198 a           97 c           77 g          161 t
ORIGIN      
        1 gccctttctc aacatgggaa aaaattacag acccaactaa tttccttgac agggaagagt
       61 tacatatgtt ttccacttgt agtttttacg acaagtttac aatttttgcc aaacctggaa
      121 ccaattggga ccatttccaa aaacggtcca ataaacccac aattcgtaca gctagactac
      181 aatgcagtaa atgattgttt gcttttacgt ttcttctaac agggaaaagt tagattgcac
      241 aattatttca tttaagttac ttaaacactt actgtttcat atcctcccag tttttgagca
      301 gcttgaaaca tagtccaaag gttaactgtt agagggacaa taagtattta gataagcatt
      361 gcattaacca acatatttca aagaaacgta aattaaacag ttttaaaaaa agaaaataga
      421 gaagaaaaac tcacagcccc tgaaaaagct cctgagaaac attttccaaa gaggtattta
      481 cataatctga agagtaaata ttagcccata ctatatatat ttttaattac ata
//
LOCUS       KCKM01002861             271 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44876apa ultra-conserved element locus
            uce-2927, sequence.
ACCESSION   KCKM01002861
VERSION     KCKM01002861.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 271)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 271)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44876apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>271
                     /note="ultra-conserved element locus uce-2927"
BASE COUNT          100 a           57 c           51 g           63 t
ORIGIN      
        1 tgggatggtg agaaatggaa aagccccttc cctccctccc ctcacctccc ccttcaaaag
       61 gaaaagtgta ggctatagaa gaaaacttgc aaaataaatg ttagaaacat atttactttg
      121 agggatccaa ctctactagc aactcctttg ctttcatccg gccgtctaat ttgctacaat
      181 gggggaagat gggtaaaaaa gacagaagaa taaagaaaaa gtgaacttaa aaaaatttcc
      241 acacaatcag ttagcagtac atgcaagaca t
//
LOCUS       KCKM01002862             977 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44892apa ultra-conserved element locus
            uce-1447, sequence.
ACCESSION   KCKM01002862
VERSION     KCKM01002862.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 977)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 977)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..977
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44892apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>977
                     /note="ultra-conserved element locus uce-1447"
BASE COUNT          286 a          208 c          198 g          285 t
ORIGIN      
        1 aatcttttat aacattttaa aaaataaata tcagatttat aatcagcttg gtggattgct
       61 ctattaggac tgtattcagt ggaggggaat aaaggtaatt ataaagctat agggccacat
      121 tcacctcagt taaaatcgtg tgacttctct cctgtgctca agtgagatcc acactccata
      181 aatctcatgg aagagcagga gcggagcaat tgcagcactt tgcagaaaaa catcccttta
      241 gcctctccga gagctcccgc tcacagccct gggggaggtg ctctggttga ggggggctgg
      301 ctctgcctcc cctctgcctg agcacgcttt cggctgccgg gagattgcga ggtgacatgg
      361 tcagcccgat gaagtacaca aaagcttttg gcacagcata tctgcaatat catggacagt
      421 caaggaggcg cctgttataa aaatacacag tgaaacacaa ctggaggact gctctttctc
      481 aaaggctaac gtaatgcatt ccttctgttt aggctcattt tccagccttt cacattcttt
      541 gtgaacaaga gttataaaac aagtctgatg caggccaatt atttttactt tgaaggccat
      601 taatcaagat tgactaagaa aatgaagaca gctaagcaaa atttcatatg tgactagagt
      661 gagattaaaa taaaaccaga tggggatgga cagagacgtt aagctgcttt ctctccccct
      721 tccctccctt tttttttctt tttttgactc atgtaataaa tgtcttttac aaattacagc
      781 actcttattt tcttacagta aatcaaattg ggtcataatg tacaagtggt ctcattgctg
      841 aaatgtcaaa aatagaaccc gctttgttct tccaaagtaa ttcctcaaat ctaaaccagc
      901 agtgtggcct gacagtctat aaaacatcta cctgggtgca gatctctttt aaggtaactg
      961 tctgctgctg atagaca
//
LOCUS       KCKM01002863             438 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44908apa ultra-conserved element locus
            uce-4166, sequence.
ACCESSION   KCKM01002863
VERSION     KCKM01002863.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 438)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 438)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44908apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>438
                     /note="ultra-conserved element locus uce-4166"
BASE COUNT          146 a           99 c           90 g          103 t
ORIGIN      
        1 cagcctctgc tactgacctt tgcctcgaac agcaataact caccacataa atgaacaatc
       61 aacggaaata ccttaaaata aaatccatcc tttctaacga agcatttcgt cctctcggct
      121 cgacaataac ctttccataa ggaacgaaag ctgtcagcga aatggccagc tcttgcgggt
      181 gatgggggca ggaggaaaaa aaaaatagaa agcagtgctt gctctgaaca gaaactggaa
      241 aagcgtaatc gcagacggag ccagaccggg tctccactcc aaatgccaca ataatgcgct
      301 gtattatgtg ctcacgtggt catacgtcaa cttaaatcct tttatttgaa atagggaatc
      361 attgaaggaa cagggcttct aagcgcgagc ctttgctttt aaaagcatta acccaatatg
      421 ttaaagaaga gttttaag
//
LOCUS       KCKM01002864             391 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44924apa ultra-conserved element locus
            uce-997, sequence.
ACCESSION   KCKM01002864
VERSION     KCKM01002864.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 391)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 391)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44924apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>391
                     /note="ultra-conserved element locus uce-997"
BASE COUNT          128 a           52 c           72 g          139 t
ORIGIN      
        1 gataattaca tatttgtggt tgaagccatg tggtggaaaa atcaatacaa cttttttgta
       61 tgacacttca ttagtgtgaa aaattttaaa agctgaaaag aactgccttg caattaaatg
      121 cctctgctac ttcagattca gtaatgggtt tgtattatta tctagtttat ttgaaatagt
      181 ggttgcacta tagcagtaat tggaaaacat tgattatgca cttgtatata gaaaacctgg
      241 caaatcatta cagggcatag caacagttag ttagccttac taatgaagca ctaattgctg
      301 taagtaggtt aacatgttag tgaaactaca gggagatgga gcttcaaaat tttttatctg
      361 tttagcgtta ttttctttaa aatctcattt t
//
LOCUS       KCKM01002865             700 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44939apa ultra-conserved element locus
            uce-3943, sequence.
ACCESSION   KCKM01002865
VERSION     KCKM01002865.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 700)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 700)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..700
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44939apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>700
                     /note="ultra-conserved element locus uce-3943"
BASE COUNT          235 a          127 c          105 g          233 t
ORIGIN      
        1 ctataaaaat ttcacacagt ggacaagaaa aaagggaatc aaattaattt ttccatttct
       61 acagtaacac aaaggttctt tcactcaaac atcagcaata tacacgataa gaataatata
      121 tattaataaa aattatcctt tcttatgtct attttcctcc tggcatttct tatcagaaat
      181 ctgacttgag agtaaataag catttttttc acaccaatga ttagtaatga ataaacagag
      241 caagtactaa agctggcttt gcacctactg aatgctgcaa gtgtctgtac tcatttgata
      301 tgcatctagc aaagcttgga tgttcccaga aggccactcc atgaacactg agagagcagc
      361 gtctgctagt ggtgcctgta agtcacaaag aagacagaaa atatttatat aagtgagagc
      421 aatcagaaag cgtgaacctc atttaaactc cattccatgc tattttaaaa gcacacagag
      481 aaataatttc atacaatgat cattagtata tagagagtat tgtaagaatc tgaaacacat
      541 ttcagtgttc acttagggag tttcagcagc attttcttaa tttaattttt tttttatgtt
      601 ttcattcatt ttcatcactt tgccttatag gtcctgtcaa actggtttct tctcagcttt
      661 ttctttctga ctataacgcc tatgtatatg catatacata
//
LOCUS       KCKM01002866             931 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44954apa ultra-conserved element locus
            uce-3790, sequence.
ACCESSION   KCKM01002866
VERSION     KCKM01002866.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 931)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 931)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..931
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44954apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>931
                     /note="ultra-conserved element locus uce-3790"
BASE COUNT          255 a          187 c          200 g          289 t
ORIGIN      
        1 tttgtatgtt gatagcagag caacaagaaa gagatggtgt tgaaaggcaa attaccttct
       61 gacttggttc catatacgca tttatatttg ttccatgaat agagcagtgc cctgtgcaca
      121 tatgtctttg cttataatat atatttttta ccccactgat gccttgcctt cccttccccc
      181 accactctct cttttctttg gcattcatag ttatcattcc caggaacatc tgaaaacaac
      241 gggatggcat caccctacag ctcccccttc tctgactctc ttgagaagct ctgtgtcgta
      301 ttgtcagtgt tttatatatt tacaccaaca gaggaggcct gggatgtggg ctttttcgtt
      361 tatatgagtc tcaccgccac agggggtatt taactttctg ccccggttgc tgtaattctc
      421 tctccagtgg atatacagtt cagatcaggt tcctattgct gtgatgacag gcattcagca
      481 ggcactgtaa ttgcagagtt aaaacagctc attttcttac tggcaagctg tagttaaaga
      541 ggtgctagga ggcagcctgg ctgtctgcag aggaactgat caaagcactg aaaggcatct
      601 ggcttgtctc tgttttcttt caccaccccc cttgctgatg gaggggaaaa aaggagagga
      661 gagaaaaagc gaatgaagaa agagaggaaa taaagaagga aaaaactatt aaaaaggaat
      721 ttaggaaaat gaagacttgt ccatttccta agggtaaaag tcagtgtctt attaaagaca
      781 ctaaacacag ttgggttagg tgtatttttt taaattctct gtatttttta atgagaaaat
      841 tgaggcttgt gaatgttcat ttgtgtctgt ttccactagc tcttcccaat gagatagcta
      901 aactcttggc tagcactttt cacgctgcag a
//
LOCUS       KCKM01002867             745 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44970apa ultra-conserved element locus
            uce-2533, sequence.
ACCESSION   KCKM01002867
VERSION     KCKM01002867.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 745)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 745)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..745
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44970apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>745
                     /note="ultra-conserved element locus uce-2533"
BASE COUNT          230 a          174 c          136 g          205 t
ORIGIN      
        1 gaggtagaat aagtggctca actacccagt aaggtaagta tagctgagct gggtctgaag
       61 gacaaaaatt ggaaggtgta atggaagcct gcttggtttc tcattgctgg ttctcctgca
      121 caacagccca atgctggctt tgccattgca gtcgtagctt tcaacagccc aacgtcctgt
      181 cacatcactt cccattcact tggtaggcac attcccttgg caggcattca ttgccatgca
      241 gttcaacctg atcagcattc taaattggtt ttgacaatta aactcacctc ctatgttgtt
      301 cttgtaagta ttatacaact cttttactct tctgtaacgg aaagccagct tcctcatcca
      361 gtcaacccct cctcttacac ctgttggcag acaaaggttt gcactacttg cagctgcatg
      421 gaagccatca gttgcaaaac tgtaggtact gcaaacaccc aaaatacagt aaaaataaat
      481 acaatgtatt cctgtaaatg ctcaattcat ttaatctttg aagaaaataa aatgaaaaaa
      541 aggctgtatc ttaccttagg tcttgtccat tatcatcaga agaaacatca tctatatgaa
      601 cctgatcaca ctcctgttga aaaaaaccca aacgataaat tagcttacaa gagagtatgc
      661 tcaccataca cttgctagag atcttgaggg aatgatgtgc aggtcactaa cagcaccaga
      721 agatggcagc gtatctacac ctaca
//
LOCUS       KCKM01002868             212 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 44986apa ultra-conserved element locus
            uce-3938, sequence.
ACCESSION   KCKM01002868
VERSION     KCKM01002868.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 212)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 212)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44986apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>212
                     /note="ultra-conserved element locus uce-3938"
BASE COUNT           79 a           37 c           35 g           61 t
ORIGIN      
        1 agaaagttaa ttaagcttta aaaaatccat cacacatcaa tgggtgcatt ttaatgagta
       61 caaaaagttg aggtgtttac tgccaattaa agtggttttt aaataagcat taattaacac
      121 agaaattcag aagaaagtta taccttgtca aagaaaggcc agtgcaggct atgcccactt
      181 ctgctcccat tcatactcag atagtaatta cc
//
LOCUS       KCKM01002869             877 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45000apa ultra-conserved element locus
            uce-1898, sequence.
ACCESSION   KCKM01002869
VERSION     KCKM01002869.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 877)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 877)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..877
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45000apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>877
                     /note="ultra-conserved element locus uce-1898"
BASE COUNT          215 a          238 c          163 g          261 t
ORIGIN      
        1 aactcgctgt gcagcctggt ggaataacaa ctttcagaag tgaggatgtc gcttttttat
       61 agctgactca catttatata actccgttaa tgtatctgct cccgggaagt tccaggatcc
      121 gccgtgttta gctgcggtac ctgcccataa atcgcggcag cgcggcgact ctcaccagct
      181 gcattgggct atttgagccc gtcagctcgc agtgtctcca tcacggcgaa ttcctgtcag
      241 ccgcactctc gctaacacaa ttcctgtgtt ttgcctggca gtaaatggac gctcctgccc
      301 cagcatcatc taaacaactc tgttaacatt tgcccccgag cgtctctctc tttgtccagt
      361 ccctgtcttc taacagatgt catccaagtc taatcaagca taaaatggtc ataaatattt
      421 ctttctggta gatttcacat tcgcatttca tgcagggaca tgatattttt ctgctacctc
      481 cagggagtac ctaatgcaaa aaccagttac ttacatccag ggctcatgtt cctttagtaa
      541 aatgcagcac atgttctcag ttcaaagaca taaaaaggcg caagacttga tctccttttg
      601 tttaactgca cccttttttt tttaaataat gtgtgccaca gcttccaccc aggtatgaca
      661 ctgtccttcg cttaacagga caacaaccag tcacctcacg ccgaatttgg accgtgctgc
      721 tcgctcaagc gcgagcattc ctgaattccg tactcccgca ccttaattgt ggcacgaaag
      781 atagattttt tccccccctc agctacttca tttaacaagc tatttaaaga cttcacaaga
      841 ttagaaaggc gcttcttcat tttggttcat tttatgc
//
LOCUS       KCKM01002870             349 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45016apa ultra-conserved element locus
            uce-124, sequence.
ACCESSION   KCKM01002870
VERSION     KCKM01002870.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 349)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 349)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45016apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>349
                     /note="ultra-conserved element locus uce-124"
BASE COUNT          124 a           56 c           82 g           87 t
ORIGIN      
        1 aacaaagttg tcaaatgcat gcagctctga cagtttgtct ttctgcaaac tgccgacaga
       61 ttgcaagtta cgcatgtgtt gagcagatgg gtaagttaaa aggaacacaa aaaaaagcaa
      121 tttattaaat cacctggaac cagcagctcc attccaaaaa tagtgagaat gaaatatagc
      181 aagagctagg agagttggca ctggaatatg ccagaaggta ccagttacaa aacaagataa
      241 acattttgag aagcctcagc tgtgttgcag aataatgagg cgttatttaa cccgatatag
      301 attaccagca gaaattaatt tagggtgcag ggttttgtga gagtgtgtg
//
LOCUS       KCKM01002871             762 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45032apa ultra-conserved element locus
            uce-2183, sequence.
ACCESSION   KCKM01002871
VERSION     KCKM01002871.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 762)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 762)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..762
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45032apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>762
                     /note="ultra-conserved element locus uce-2183"
BASE COUNT          248 a          155 c          137 g          222 t
ORIGIN      
        1 ccatgtcttt atcacacggc ctccctgctg tagcccaccc gcctcatgct ccttcgcccg
       61 gccaaactgt caaaccagaa gctgatagag accacccaag cgaccaattg tagcctacga
      121 aaacagcatt cccaacatcg gcgagttcaa cttcagcgtg tggaaaacaa acaaaacata
      181 acaaaacaaa accctggatt ttgattaaag gcaaaaccat gaacttacag gaggagacga
      241 ttatcgtttt agaaactggt ccaatataca gtataaaagg aaaaggtggg agacaaaaag
      301 aagatttgga aacatttttt cctccgtata aattgtagtt tgtccctgtc cagtggactg
      361 attcactgtt tctgtgtcct atgggttctt tgttaagcaa gagaagttag tagttaatta
      421 tatcatgaat gtacttgtct gtgtacagtt tttagaacat taaaaagggt ttgtttgctt
      481 agctgtcaac aaggaaaaac ataagggagg cattcaacaa accagttttg agattaaaaa
      541 tcctttcttt tatattttaa aacatgccca agaatgaggc agttggcaaa cttctcagga
      601 caatgaattt ttcccatttt tctttctacg ccgcacagtg cattgttttt tctacctgct
      661 tgtcttattt tttagaataa tttaggaaac aaaagaaaaa cagtttctcc taattttggc
      721 atgaattccc ttatttcaaa acgaaaacaa ccttgcaaag ag
//
LOCUS       KCKM01002872             724 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45048apa ultra-conserved element locus
            uce-6990, sequence.
ACCESSION   KCKM01002872
VERSION     KCKM01002872.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 724)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 724)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..724
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45048apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>724
                     /note="ultra-conserved element locus uce-6990"
BASE COUNT          218 a          137 c          143 g          226 t
ORIGIN      
        1 acgttatttt taatataaca tgtaagatta ttatttcttt tccaatagta aaaacttgtg
       61 cctgtgacct gggctttaag agtgttactc taagcagtta aaaagatttc tggagcagaa
      121 ttggttaatt agtgttttgt gttacactgt gttacatatg acccgaccag agataaaaag
      181 gtttaaaggt ctcttgtaac cctgcaatgc catttgtaac acaaaaataa ccccctttca
      241 ttactggcat gccactgtag caggcaggtt attttttccc ttcgctgcaa tgagggcagc
      301 tttcgcatca gaggaattct tggcaaatta atgcgctacc tcttgggcta attaaattag
      361 aaaggatcaa aaatacagag cagcttttgt ggtggacaca atgttgtgct tcatgcatct
      421 tgctcagaga ggaatttctg ccatttagcc cctttttgcc tctagcagcg ttctggactc
      481 tctaacacag tcaagttcct aatttgcctc aatgagagag aattattaac tgataataag
      541 aaaaggagca ttcacagctc caggctgggc tgcgtggaaa agggtgagct acacagcacc
      601 tgaagcgcat gcaattttta ttaattcctg cctaaaacaa cgcattcagg agtaaaattg
      661 ctgtgcaaat gacaaaaaca attataattt tgattctttg gttctgaaaa tatgaactgc
      721 ttta
//
LOCUS       KCKM01002873             663 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45064apa ultra-conserved element locus
            uce-2561, sequence.
ACCESSION   KCKM01002873
VERSION     KCKM01002873.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 663)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 663)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..663
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45064apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>663
                     /note="ultra-conserved element locus uce-2561"
BASE COUNT          239 a          129 c           91 g          204 t
ORIGIN      
        1 agcacgctga ttttatttaa aaaaataaaa tctgcaaaaa gaatgtagtt aaaaaataca
       61 ccatctgttg tacactgtgg tttaatattt catacagaaa cccagaaaaa gtgttttaat
      121 tgaaccttca atatatttgg ccataatctt tatgttaaca ggactcctac aaaggttcca
      181 ggaaagaaat acttatgaaa cagagaacaa gggaacatat aagccattac agaagattgg
      241 attaaaatgt acttacccag gcctctcaaa tatcatacat ctccattagg taggctttag
      301 gcaccaagcc aatgtttccc tccagttctc ctacccacca gccaaattca ttgtactcct
      361 aattgaaaac aatatgcaat attaaccttt agtctgatat aaatgcaata gagtttttta
      421 tgcaactcct tatggatgct ttctcctata tacagttata atcatttcaa ctgaaaatta
      481 aaacattata tctttttgtt agaggcattc acatgcagag ttaggcaaag acggaagtta
      541 aattttagaa aggccagaca tactcaggaa aatttcttaa ttacggccac gcttctctat
      601 ggcacctaat aaaaatagct gacctctcca tcctctattt atcacaaata taaattctta
      661 tct
//
LOCUS       KCKM01002874             997 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45078apa ultra-conserved element locus
            uce-7678, sequence.
ACCESSION   KCKM01002874
VERSION     KCKM01002874.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 997)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 997)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..997
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45078apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>997
                     /note="ultra-conserved element locus uce-7678"
BASE COUNT          285 a          205 c          205 g          302 t
ORIGIN      
        1 tttgtgcagt taaaaaaaga aatgtgtatt gcatcctgca tttataacta taatattttc
       61 cttagatctt agaggcacgt ctataagcca gccaaactgc tgagtgttac tttgcagagc
      121 tttactgggg aagcactgca ttttgcaaca attaattttg cagaggaagc agcctgttta
      181 aagacgcctg cagcagtcac taaaatatgt gttgtttttc aaggccacca gacacacagt
      241 tggctaggtt ggctaataaa caaaacaata atgccccagc ctcgtggggt ttgcgggaag
      301 aagggatgag aaataaaatg aataatgctt acctgctagg ggtgggtgaa gactataatt
      361 gtttagcctc cagcagatcc ctgcaagggt taaaaatgac agaaatatta gttggtgact
      421 gctaagattg ttggtttgaa gctctgggca aaacacagac tgttatttac cggacttggt
      481 cgatttactt cttaatgcaa taatgacctg tgaaatgaaa cgtgagctag acaattgttc
      541 ctcattgttt ccagtaaaac atcctttcat accccattaa accaccatta attccatttg
      601 aaggagaagc aggcacaaac accgagggat ctctctctat tttcctcttt tcctctcttt
      661 gtgggactga tcaaggcctg tggatagcaa agcagctttc ttacccatgt tagagggtgt
      721 tgggcagccc atggggacac gtttccgaat gaacatcaca gaaatccact ggattggcac
      781 tcactggatc ccattcttga gttttacaga aaaatatata agctaacctg gcaaacagag
      841 tctgttgttc atacatctta tcttctttag gttgtctttc tttaagcacg aggcttacgt
      901 aatcatgtag tgtatgtccg catgtacatg tgtgccattt cccctccctc cctcctaatt
      961 tttaacctat tttccatttc agtcaaaagt agtagat
//
LOCUS       KCKM01002875             538 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45093apa ultra-conserved element locus
            uce-3807, sequence.
ACCESSION   KCKM01002875
VERSION     KCKM01002875.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 538)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 538)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..538
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45093apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>538
                     /note="ultra-conserved element locus uce-3807"
BASE COUNT          170 a          106 c          114 g          148 t
ORIGIN      
        1 aactatttgt tttccctaat gcaaaatcct gaaggaattg gtcattgtgt cttatatgac
       61 gttgaggctc accaggcaaa agtggacttt ctccatcact tttattttgg gtgattgaat
      121 atgaagtcca gctcactgca catccttatg tgagatagtt taacacagta cctcgaggct
      181 ctgcggtccc agaatgcagt gcagctcact ggcagtagtt cagctgaaga ctaaacattt
      241 ggctcagtga cagcagagct gccaagagtt ggcaacaaga gactcacagg gaagcagcag
      301 gctgctaaac cctttcacat ttttaattag atccacacac ccatgtcttt gagctatcat
      361 aaatatacag atgacataga gagcattatt tggggtaagg aaaaaaaaag aaagaaaaga
      421 aaactgtact gtggtatctc ttaccttatt aaaataattt acctacagct actctttgga
      481 actgagaggg ggaaaaaagg gggttctgac atttaactca gataaaagtc tctccttg
//
LOCUS       KCKM01002876             408 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45108apa ultra-conserved element locus
            uce-1029, sequence.
ACCESSION   KCKM01002876
VERSION     KCKM01002876.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 408)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 408)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45108apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>408
                     /note="ultra-conserved element locus uce-1029"
BASE COUNT          169 a           59 c           47 g          133 t
ORIGIN      
        1 ggcttactaa ggaaatgaga gttttatggt tagactaatc tcttaataaa actgcagagc
       61 atcatgctat tagtcacaca gtgaatttca aaatttaaga gctttatatt aaaaactggg
      121 taaaggtaaa atgaattgat tgcaattgta aaattaatac attcccattt taattcttct
      181 gttctacagt ccaaggcaag tataaatgtt aacataacac tgttaaatca aatctcaatg
      241 caagagaacc gattgcatct ctactttaaa tcttatcaac tttccaaatt ttcatactaa
      301 aatatattat tgtattaata caaactacag tattatacac tacactgtgt aataaataaa
      361 gaaatataaa aataagacac ataaatataa aagttttcta aaactaaa
//
LOCUS       KCKM01002877             715 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45124apa ultra-conserved element locus
            uce-2024, sequence.
ACCESSION   KCKM01002877
VERSION     KCKM01002877.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 715)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 715)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..715
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45124apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>715
                     /note="ultra-conserved element locus uce-2024"
BASE COUNT          256 a          138 c          107 g          214 t
ORIGIN      
        1 aattcatcaa aaactttgtt ttgagctccg attaataaag taaaaatgtt gttttttatc
       61 ataatgattg tccttccttg atttctactg acattttaga gccgatgtcg gctaataaat
      121 agaataaaat gctcatatgc acaattcaga ttcaaatatg ttcctcccat tcccccagcc
      181 aataaatgca atttttacca gctggcaatt cctgaacagc cagtcatttt cacgaatgtg
      241 gctttaacat acagagcatc agcactgagg cagggctgga gctaaaacaa agtgttcata
      301 catacatgta ttttgcataa ataaatgaaa taacaagaca taaaaatgac tcaaatccgg
      361 caactgtgag gcaggcccac acgagtcgaa aacagatgac ttttgttcat gtagttttcg
      421 tacaacagtt tcacattagt cagaagtgat aaaaaatacc atttatatcc agtgcttata
      481 acacttacga aacaacatct gtgagtgtgt gtttttttgt actacaagca aaatcaagtt
      541 tcagtcctaa agaacagtcc tttgttctcc acaagcctgc agaatattat tttggcatgg
      601 tcataaaatt taaaaaaatt aaccaactaa tctaaatgtt tgcctttgtg caaaaaaaat
      661 aattacgtaa aatacaatgc tagcaataca gcattctacc tatgcaacaa aacca
//
LOCUS       KCKM01002878             668 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45140apa ultra-conserved element locus
            uce-6233, sequence.
ACCESSION   KCKM01002878
VERSION     KCKM01002878.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 668)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 668)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45140apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>668
                     /note="ultra-conserved element locus uce-6233"
BASE COUNT          212 a          132 c          138 g          186 t
ORIGIN      
        1 agggaaggag gaaggtatga aaaataaaac ccatttacag aagcagggat cttgggggtt
       61 gctctagatt aagcagttaa atcgcaatct atgactatga agttccaaaa gatgaatctt
      121 caatcatatt tcctgaagtg caaagataaa aatacaattt ttgctcctta aataagtggt
      181 ggcttatgcc actataacac tgcagaaaat aatgccagtg ttggcttaaa agaagatcct
      241 gcaaacttcc tattttattc ctatacaata cagattgatc acctaagagg agcataatta
      301 aacaatgcta agcatcccaa cccctctgag aacgtgctgc cgaaaaatat ttttagaaca
      361 atcactgtag taattcttct tagttgtaga aacactccaa atcagaaagt caatttttcc
      421 tctatttgca gaagtgtgct ggttttcact ggaaaggcgc ctgtgttttg tttggctgct
      481 gttcatatac tgccttggca ggatttcctt ggattgctta cagtgaacat tgctcttgca
      541 tacagtagca ctcccatttt aaccgtccca gccacacgtt ttctaataac acagggagag
      601 ctgcaaaatc cctataagca cagctcttta aagcagcaac agaagggggt gggggcggag
      661 gacgggag
//
LOCUS       KCKM01002879             785 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45155apa ultra-conserved element locus
            uce-4430, sequence.
ACCESSION   KCKM01002879
VERSION     KCKM01002879.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 785)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 785)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..785
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45155apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>785
                     /note="ultra-conserved element locus uce-4430"
BASE COUNT          177 a          163 c          141 g          304 t
ORIGIN      
        1 aaggttagaa aagaaaaaaa gccgcagtat atacgagcag acatttcctg tgcatttaat
       61 caatagtaag aggccatttg tttatttctt catggtccag aactgtttaa tcatgtgtaa
      121 ccaaactctg tataatagta tgagacattt tactcctgag aatacgatga tggtaggtaa
      181 ccaggctctg atttccactc tagctgtggg tatttatgtt gtcaagtggt gtgatgtgaa
      241 gtgcagaagc tgttctgttt tttccttggc aaatacaaac ttgatttgtg gtcctttgtc
      301 cttttatttt ctttttcagc tttatttttt agagccttac ctgtcttttt cccttacttt
      361 attctctttc tgtactttct tttcccccta aatactttac ttattagcta agcctggcaa
      421 acttctgcct ttggtttcaa tcagtcagga aaaaaacagt ggaactcaca ttctaatgat
      481 aactgaactg ggtaagaagt gcctttttcc ttcacatcac tatcttactt tctgttgttg
      541 ttgttcttac tgtcatcggc ttttccttta tttatctggc tgtatcagag gggccaccct
      601 catggcactg ctttgaatgt gttttatttg tggttctggg tgaaatcgac tgtcttgttc
      661 tggcctttct taatgatttt ttttttacgc agcatcagta aacctttgat cacactcgcc
      721 tgacctgccg gctgttttca tagcaccttc tcaccaattc attttctttg gcctgggtct
      781 ccacc
//
LOCUS       KCKM01002880            1044 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45171apa ultra-conserved element locus
            uce-2512, sequence.
ACCESSION   KCKM01002880
VERSION     KCKM01002880.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1044)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1044)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1044
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45171apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1044
                     /note="ultra-conserved element locus uce-2512"
BASE COUNT          304 a          214 c          138 g          388 t
ORIGIN      
        1 ttgcatggtt tcttttatct ccctggcatc tcttacacgt tgaataattt tagttttcct
       61 ccaatttcac ttccttttaa tgttcacttt atattttgac acgcttgctc cgattttctt
      121 tctgtaaaac cttttctctt ttactctgtc attagccaaa tacaaaatgc ttaagcgtag
      181 ttttattctg attttatatt aagtatgata agtgttagat tcatgccacg aaaaatataa
      241 actacacttg cataatctct atcaagcaac acattagaat agaataaaaa cagtccagtg
      301 ctgtttgctg tctacttcat aggcatatat ttaattaagt tatgcttctc ctaaaattca
      361 aaaagcttaa tctttttctg tccttaaatt aaactctctg tgctctacaa tgaccaaaac
      421 aaataatcta tgacctacaa acaagacact tgcattccct aaagatttac ttcatcttct
      481 cctgcaggtt atatatcttt gaacctctct tttctgtaac gaccttctag tgctcattag
      541 catgctgatt accattaaca cagctataat gcagcaattt tcttgttgta tgttgaggag
      601 aagtgctcat ctgaatgcag tcaagggaca aaattaactg cataaatcta cagcacaaac
      661 tggatctcat ccaactttac atggatcttc ctccctctgc taggtgtgac atcatcatct
      721 tgctccccac tgatgcctta ataagtatcc ccaggtgtca cactatttaa tttacccctt
      781 ctctaaattt tacagttcca gtgataactg acaccttgtt gtgttttctc ttaatatatg
      841 ttaaccttta ttttttcttc tgtctctcct aatgagtcct tgagttatgt atacatttat
      901 taaacaaagt ttgtacaaat gtatgtgtat gtatatgcat actcgtgtgt cactactttt
      961 gtatgttgtg aaagaattca agggacaata gaataggata ttttctaaca aagaatgttt
     1021 acagaactaa acttttccca agga
//
LOCUS       KCKM01002881             605 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45201apa ultra-conserved element locus
            uce-1884, sequence.
ACCESSION   KCKM01002881
VERSION     KCKM01002881.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 605)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 605)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..605
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45201apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>605
                     /note="ultra-conserved element locus uce-1884"
BASE COUNT          204 a           97 c          106 g          198 t
ORIGIN      
        1 tttatgtctt cccagctttt agcccataaa aaatctgtgt tttggagagt atgttacact
       61 ggtgatctta aaactcccaa gtctggtata atgagtcctc aagtgcatta taacttacta
      121 gtaattacat ttcaacattt ctgctttcag cagttagtgt tttattcata aacatttaaa
      181 cactgaatta ggcataaaat aagaatgttg gcaacaacct ggcttaattt cattaagtat
      241 taggtaaacg tagtattgct tcttcaaata atccttggtt tgaatgctaa agatgtaatg
      301 aacttcatgg ttcatagcat ctgacattgc ttaattaatg ggtgcattta tagtacatag
      361 gcctcggtaa ttgatttata tgcatgattt gcacatacag ctgttagttc ctgtaggaaa
      421 gtcataattc aaatgtgtgc atattttcta gatatgggga aaggggcacc tcacaaactt
      481 gtcaagttaa cacgatacca aataaatagc acaggaaaaa taaatagtac aggaaaaaac
      541 atactagaag caatggtaat gttatagctt tgagtttcca cagctcacac atttcagatg
      601 gaaaa
//
LOCUS       KCKM01002882             644 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45217apa ultra-conserved element locus
            uce-1468, sequence.
ACCESSION   KCKM01002882
VERSION     KCKM01002882.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 644)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 644)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..644
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45217apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>644
                     /note="ultra-conserved element locus uce-1468"
BASE COUNT          192 a          131 c          121 g          200 t
ORIGIN      
        1 cagctcgaca ctgagccaga ctcctcacaa accacccctg cgccccgcca gcaactagcg
       61 ctccgctttt gctcctctct gtctctcacc aatggctggg atctgctgaa actgctctgc
      121 tagcaagatt tgtaaccgtt tgcacaaatg ctttacatta agaggtacta aagctgatgt
      181 gtttttcttc ttctgttgca cagaatccta atgcacatcc acggccgacc tcccaggatt
      241 tagcagggtt ttgggatatg ctgcagttgt ccatagaaaa tattagtatg aaatttgatg
      301 aacttcatca gttaaaggcc aataattgga aacagatgga tcctcatgac aagaaggtag
      361 aacattgtag attttgtatg cttcatttaa aaccctgcac aaatactgga cagattaaat
      421 aggcctctgt gttacagcgt tgacgttaaa aatgtgaaat gaagctcata tcaaattaat
      481 ttcattgtaa taacaatgtt tacataataa tcatctggga tattatctgt aatatgtttc
      541 aggcatattt ttaaaccaga tctgtctttg tgaatcggat aatgggaatg tagtactttg
      601 ttaaacttta cctttagtca tattagaaga tcaatcattg gaag
//
LOCUS       KCKM01002883             888 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45232apa ultra-conserved element locus
            uce-4348, sequence.
ACCESSION   KCKM01002883
VERSION     KCKM01002883.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 888)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 888)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..888
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45232apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>888
                     /note="ultra-conserved element locus uce-4348"
BASE COUNT          265 a          209 c          176 g          238 t
ORIGIN      
        1 ttcttctgtc tagcatgttt cctcagcgtt gtcctgggtc acccggctct tgctgacagc
       61 agtgcctgac cagcaatcag ccccacacgt gcaccaagaa gccaataacc tttctcctgg
      121 acctcacccc cccctgcaag cccttgtgat gggctgcact ccttccttcg aggacgatgt
      181 ctctgtccat gcgatgctgg agaaaggctc ttcatcaagt gaattgataa caggggtgat
      241 caaagtctgg cagttgtacc ttatctaccg gggatcataa ttcaggaatg aagctgccct
      301 tgagtttgct cctccccacc attaaattac attcaatcac cgcatggaga atgcagccca
      361 tgcgctcgca gccagatgtt atcattacag gccttttctt ataaactgat gctgaaaccc
      421 gagtggttga tgagactagc taagcagttg tacctttgac ctgattgcat taaacttgcc
      481 ctatcaattt aagcttagta taaacaccat ttcccagagt ccctcatgac ttcagtagtg
      541 agaagaagct gactaagcct aaacattttt taacagcaat cttgtcttac aacaccaagg
      601 ggatttgctg tgtatctggg gctttataaa accatatgga catgctgaaa gaattaaagt
      661 cctttaaaaa aaccaaaatt gatggtgaca gtccttttag aaaatcagtt tgtagaatgt
      721 cagcacgaga agagttggaa acgggaacaa aatagtttta aaaataccac agatttgtgt
      781 tgtttcacac agttgttcct gaatagtgag atttagagtt aaaagacaaa acaaatggga
      841 aaaaatctcc aaaaactgaa ttcaccacca attaaaaaga acgccccc
//
LOCUS       KCKM01002884            1162 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45248apa ultra-conserved element locus
            uce-1376, sequence.
ACCESSION   KCKM01002884
VERSION     KCKM01002884.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1162)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1162)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1162
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45248apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1162
                     /note="ultra-conserved element locus uce-1376"
BASE COUNT          308 a          220 c          237 g          397 t
ORIGIN      
        1 gtccagagga gaaatttcat tctgtcaaac ttccatgttt aacttttttt gggatagatc
       61 tggaggctta gttgagaatt aatcttcttt gcaggcagac tacactgcat gtccttggcc
      121 cggagtatga gagcagagct ttagactctg tcgctccact gacctgttag gaacaggagg
      181 accttcggaa tagtgtattt tcccgttcct tgagctcacc cgacaccgca gagttgcaac
      241 gggctcagtt gtgcgctgag accgactttg caaatcaggt ggtctccaac cacggcacac
      301 atgtaacaaa gggcttgacg agagagtgaa ctttgggctt attgtgattt ctgcaccttt
      361 tccacctctt ttacctgccg aacatttcta catgtttgac cctttcattt tagctttacc
      421 tttctttgtc ccctgaatga ccggcataat tcatctgatt atctattatc ttgttattgg
      481 acataaattt tacaagctgt tgagagtgcg gaaaatcaat accttttaaa tgctgtttat
      541 gtgtgattaa cggttaatat cctcacaaat tatttaatgt aataaggtca tttatctttt
      601 gcatgggctt ggtatcctgc aaagaataat agaataataa atgaggacac tggtaaagag
      661 gatatttcag atgcttttct gtgccagttt tattacccat atcctcttta cagccacaaa
      721 gctgcactat ggttatttta tgcaagtaat aaaattagcc tgagatggaa ttagcagact
      781 cggggctctt tataggtcaa gtcggtgctt tatgagcctg cgactcccta gtgctatcgt
      841 catgaggcta gttagagggg tctttaagca tgatttaata tgtccatgct tcagaaaata
      901 gttaaatagc taattaaatg gaggagttaa tttacatatt aattgacctt ccagtaatat
      961 ttatattgat acctacatga gaagcccttg tcttcattgc ctttcatcat agttagtctg
     1021 agcaaatatg gtggaacttt tttgtttaaa ctgaagtttc tctttattgt cacaggagag
     1081 ttgttgtatt cccttgaata gcgtagtaca tctggcctca agtttatgca tttgctgaag
     1141 ccttttgttg tagaataatt ag
//
LOCUS       KCKM01002885             646 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45264apa ultra-conserved element locus
            uce-7351, sequence.
ACCESSION   KCKM01002885
VERSION     KCKM01002885.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 646)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 646)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..646
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45264apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>646
                     /note="ultra-conserved element locus uce-7351"
BASE COUNT          206 a          110 c          139 g          191 t
ORIGIN      
        1 agtttctgta aaggcgtctg tttgggtgag atgccgtgtt gtctgggatg gataataagg
       61 caactctgtc taatcttgga gaacaatcag cccatcttga gaaggtgact gactacgtat
      121 gctcttgccc tgacagcact agaacaatgg ccccataatg cacttgactc agctggtaat
      181 aaaatctact tttgattagc agccatggct tgtgtcaatc actgcatggt gtaccattgt
      241 cctctggtcc tgaacacagt ttatttacag ggaaacaaaa gctttttgga tatggctgct
      301 gcccagagat tgcaaaatag attgagctgt cagcctcaca cacaagatga agattaatga
      361 gttgtgcaga caataaatat gaagcaatga ccataaatat gctaataggt attatccata
      421 tacactataa ttgctacaaa aattaaaaag tagtgtgaag gaaataggtc acagggtgac
      481 agatagataa tcttggatgc tgagaatctt tcgttcagtc agattctcta caggtttatt
      541 tccttcaatt agacccttca aaagagtaat tgtttaaaag ctgtttgaat aatctctttt
      601 gaaacagagg tttatgggaa aatgtttatg aaaaagtgac aatgga
//
LOCUS       KCKM01002886             610 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45279apa ultra-conserved element locus
            uce-6915, sequence.
ACCESSION   KCKM01002886
VERSION     KCKM01002886.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 610)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 610)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..610
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45279apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>610
                     /note="ultra-conserved element locus uce-6915"
BASE COUNT          216 a           95 c          115 g          184 t
ORIGIN      
        1 catccatcgc acagttctgt ctcagagaaa caagttaatt actaaataat tttaaggaaa
       61 gtttttctct ggaatactaa cacagagaaa tcatgtaaaa ttctatttga tggattgtag
      121 tggaaaaaat gaagaaaatt tctttatttc catacaaata cttttgtatg aacatatgga
      181 aaaatgaaaa cacaaactgt ttagtgtttg aaataaacaa caatcaaagg taatccttta
      241 aaattagggt tcagattagt ctctgcaaag gatgctgttt aactgaaaca tctggtagtg
      301 ttacgttgag agacaggcct tttttaactt tggaaatgag attagtagat cagttatttg
      361 taagtgtcca agtaatttct aattatttta tctgggtcac agataatccg cttttacagg
      421 gctcccacaa tgacatcaga ggatcactgc tgaactgatt atcctgttac cttccaccat
      481 ccatgggaag atgggatttt ccttttgtac ggaggaagag aaagaagtgg ctgattgctt
      541 cagacaggtg gcagccaaca aaataaaaaa caacacagat cttgagagga agaaaatctc
      601 acatatgtaa
//
LOCUS       KCKM01002887             367 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45294apa ultra-conserved element locus
            uce-6232, sequence.
ACCESSION   KCKM01002887
VERSION     KCKM01002887.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 367)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 367)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45294apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>367
                     /note="ultra-conserved element locus uce-6232"
BASE COUNT          136 a           59 c           77 g           95 t
ORIGIN      
        1 tttttaactc cccctaaaca gagttggttg gtcaagttga tctcttgttt gaaattcaat
       61 caagggcatt aaagtgtaaa ccagttggaa aaacaaagag cttagggaaa tcatttgctt
      121 aaacaacaac aaacaagcac tggtaatctt cttacagaaa ttaatgaagg gaaaaccccc
      181 tcagcttggg tggataatga tccttagcta tcatgtaaca agcctagaag gtttagggag
      241 aaggtgaaaa ttaagaaagc tggattaaac tgaacttcca gaggaacaaa aagaaattca
      301 ggataaagat cagttctccc aatttgagat tgaaaagtag ttctgaactg gaaggagctt
      361 aatccgt
//
LOCUS       KCKM01002888             916 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45309apa ultra-conserved element locus
            uce-3304, sequence.
ACCESSION   KCKM01002888
VERSION     KCKM01002888.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 916)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 916)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..916
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45309apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>916
                     /note="ultra-conserved element locus uce-3304"
BASE COUNT          309 a          155 c          207 g          245 t
ORIGIN      
        1 aaattataaa gaaaggtaat ataaaatgta gaataatgtg tgggctcatt ttacttcagg
       61 ctttctacca cacagggacc aaaggagagg gggagagtgg atggatcgtg gtttttattg
      121 cttggctgca atgtcaaaat tgggtttgtt taaaatattt atgacatgag agaaagaaaa
      181 tctgtgaatt actcagaact taatgtatgt gctctcaata tgttccacat tttctttagt
      241 tggggacagc agagtgggga attgaggata acttgtttac tgccaaacag ctctccatag
      301 tacctagttt tgctatgtat taaaaatcac ggttggggcc aagaatgcca gagctggaat
      361 taaagacgag aacacacaat aactttaagt aatggcagag agatttaaat agcacacatc
      421 agcagaaaag aatggggaaa cctacagtac actgacttca ttgatacccc atttatcagc
      481 aattactgac tccattaaag gcagagttta cagcagacag agaaacagag cctaaaatat
      541 gtcccaacag atggacggag agtgtcagtg atgccgtatt tcaaaggcat ctgcaacttt
      601 gttatcattg tacatggagt cagaaagaca gtgaaaaaca ctggagtaag ggccagcaaa
      661 tgatttactt gaccctgcat gggcagaact gacagcgaaa acctcattaa ttcctcaggt
      721 cattctggaa gacattaatt tggtttggac tcgggacgag gggagatttt ccagacatac
      781 accaggaatt atgaaatctc tatagccaga ggaaagtatg tccaaatcac tttctgcata
      841 aatcaagctg actttctgaa gaaggataat atgcctaatc aggggagtta tggaacttct
      901 tgtacttatt agacag
//
LOCUS       KCKM01002889             324 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45324apa ultra-conserved element locus
            uce-2230, sequence.
ACCESSION   KCKM01002889
VERSION     KCKM01002889.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 324)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 324)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45324apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>324
                     /note="ultra-conserved element locus uce-2230"
BASE COUNT          106 a           45 c           47 g          126 t
ORIGIN      
        1 gtaagttata agtggctgtc ttatctttat tacaaaatat tgtaacaaat tcaatatcct
       61 agtcttcatt tgtatgaatg gtttgtattg tacataattt aaccggtgtt atttgagctg
      121 cttattaata ttaacttgta attgtctctc tgcttgttat tggttaaaaa caatcaagga
      181 aatgaggaat ccattttatc aatgtagctg taaactccat taaaagacag aactatgtac
      241 aaagcattta ttcagcttaa gtatcgttga aagctataca tatacaacat tacagtctgt
      301 ctgtatttag atattttatt tcca
//
LOCUS       KCKM01002890             252 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45338apa ultra-conserved element locus
            uce-5816, sequence.
ACCESSION   KCKM01002890
VERSION     KCKM01002890.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 252)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 252)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45338apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>252
                     /note="ultra-conserved element locus uce-5816"
BASE COUNT           78 a           34 c           46 g           94 t
ORIGIN      
        1 ctcttaataa gcataaaaaa ttaacaaagt caccgaagag ttaatcactt tttgatggtt
       61 tgttttattt ctgttttgta acaaatggct gaaatcaatt aaactgcttt actctcaact
      121 gatgaagtta attatgattt gttatggtat ctgatatgta aattattaga aagcagactt
      181 acattcgatc gactgcctgc gggcggtact ggattaatca ttgtgtagat gttgtcactt
      241 gaatttgttg aa
//
LOCUS       KCKM01002891             839 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45352apa ultra-conserved element locus
            uce-2389, sequence.
ACCESSION   KCKM01002891
VERSION     KCKM01002891.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 839)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 839)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..839
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45352apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>839
                     /note="ultra-conserved element locus uce-2389"
BASE COUNT          273 a          181 c          155 g          230 t
ORIGIN      
        1 ttgtaaacca ataccagtgt aaacattgcg tagatgaggt caaaataagg ctgttattgc
       61 atgattttta aagtgctcat gtaaattaat attctcacgc tttaacagat ttaggcacat
      121 cagcacgaat acagaaacgc aacaagttga aaattcaaag tacatttact agtgtatttt
      181 atgccactca cattttcagt cagaccaccc agagcaaaga aaagaaaaag ccacaacaaa
      241 aaaagccctc tgcattgttt gcaataatat ggaaggaaat tgagtgtata ttctcttctt
      301 cctgtatttt ccagctagat taagctgttg tcttcacaat tgcctcccag ctgctgtgac
      361 ttgtgaaaac aacagaccct gctctgttgt ctgcagaaag cctggattgt tatgagtaac
      421 tttattgcag gcacatgagt gtgttaagac tttaaaacac gctcaaatgt catgtgcaca
      481 cccagtgacg ggcaagaata attatgaaaa aacaagaatt ctatgtctac gaaacagtgt
      541 cagacaaaat gggccattca ttgtgtccct ttgggaatgc ttggactctc cagccagaaa
      601 acaaaaaagg cacttttttc ctgccgtagg ctgaatactt agctttgcca tctgagccct
      661 aagaaaacat gggcccccct ctcgaactac tggttggccc gcacacagta aaaagtatta
      721 atgcccccct tttttccagc agttccctct gtgtaggctg cggccaatgt aaagtcaatg
      781 caaagacaaa acagtttgcc taacattagt aaaaaaaaca taactcttgt acagtctga
//
LOCUS       KCKM01002892             776 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45368apa ultra-conserved element locus
            uce-4097, sequence.
ACCESSION   KCKM01002892
VERSION     KCKM01002892.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 776)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 776)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..776
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45368apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>776
                     /note="ultra-conserved element locus uce-4097"
BASE COUNT          274 a          140 c          139 g          223 t
ORIGIN      
        1 ttctctgtga gcacagattt accagtatgg tggaaatcag agctcttttg agggtttttc
       61 tgcagcgtat tcaaagtgat cataaatcaa ttctagaatt caaagacagt taaggacata
      121 ggcagtaaaa aagactgagt aatgctaacc cagaactcca atcattttta aagtaagtgg
      181 ggaaaacact ggtcaactag gcgattgttg gtatccccca aaatgtaatc tccaagctga
      241 agaatggcag ctggcagaac agctggtgaa taggattaat gtcagaagaa agaaataaaa
      301 ctcaacatat gtccaagcct gcggtgctgg gactgagcat gattgtaccc cgacggatac
      361 catgtgtaca gctggaaagt gccactgtgc catgcttctc taccccacaa ggtcatttct
      421 aagaagtata gctaatatct gaactgaact tttccttgag aactccaact gattaagaaa
      481 tgaacaaaca agcttcatcg tgcaaatgtt ttggactatt ttaacctact ctgggtaggt
      541 tttttcataa tgcaatctca actaaaaaag cagattagta ttaaaatgga cagattgcac
      601 taatgtaaat ataattttaa agctatttaa accttttaat cttatctcat tcagatttcc
      661 acattcaagg ttcaaataat accaaaacca caagtataat aaaataaatt atttcattta
      721 tggtattgac atatctgact gaaaatacat tttaataaac agcatgcata gctaga
//
LOCUS       KCKM01002893             992 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45383apa ultra-conserved element locus
            uce-5601, sequence.
ACCESSION   KCKM01002893
VERSION     KCKM01002893.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 992)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 992)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..992
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45383apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>992
                     /note="ultra-conserved element locus uce-5601"
BASE COUNT          220 a          212 c          213 g          347 t
ORIGIN      
        1 agggattaat gaaaaaaggc aatgcgtgta aaacaattaa agtgctgctc gttctgcagc
       61 tgactcagga aattattgtc tctttgcctt tctgctgggc tcccctgctt tactgaggta
      121 ggcgtgcacg ggcttcatat cattagctgg tggtgtgctc tggagttgtt ataaatatgc
      181 ttgttttggg tcaggtttta ggagaaaaaa gcggtctctg atttgttgta atgacggtgt
      241 gctgtctgca ctgtgtcatt ttctttaccc ttgcagtcgg gtaacctaca attagggact
      301 gatgtcagcc tgtaaaattt tggtgtaaaa ttttggttgc accagaatac catacttctt
      361 aacaaagctg gcagacaggt cctttggcag cagctgcttg ccatgtgatt taaaacttcc
      421 tgtcactata attgatgtgt ttttattctt tccacttcct gaagcctgat cagaattaaa
      481 attgctgttg gaatttcctg tcaaagcaac tcatttattc gccgaacgct gcactgacag
      541 tactttgatt ggacattgcc ttcagctatt cttgggcaga gagattgctg tgaattatgc
      601 tccttgccca ggtttgactt ccctgcatgc cacatctgca aatatataca gattgtccat
      661 catgtggtaa ccttgtccta atgaaaactc cacatgtaaa atgttaatga ttcgagtatc
      721 aaacttggcc acctgctggg gccctgcctt ttgtgtttat ttaggaaacc ctgccgagtt
      781 ttccagctga ttgtctcacc gtaactttcg tgttgccttc ccaaaagagc tctgctctgt
      841 ttctgcgcta aggaggattt atgccccttt tcagctttcc tttaaaaaag ctcttgtttg
      901 tgtgtgtttt tttttcttta aattttcatt ttcagtatgc tatctgcatt ccctcccaga
      961 ggtggctgct ttctgctgcc gtgtggcact tc
//
LOCUS       KCKM01002894             955 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45399apa ultra-conserved element locus
            uce-889, sequence.
ACCESSION   KCKM01002894
VERSION     KCKM01002894.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 955)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 955)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..955
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45399apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>955
                     /note="ultra-conserved element locus uce-889"
BASE COUNT          297 a          180 c          192 g          286 t
ORIGIN      
        1 ataaagccaa agcagtggca acctctgggc aatgtaattg caagataaca ggcaccaagg
       61 ttaaattaaa aacagccaag aagaaacgct ctttgggaca gcatggagct tttctcaaac
      121 agtccatcaa ggttataagt aatgtatttg agaacttcag taaggacggc tgggaggatg
      181 tgagtgaaag caggtacggc tctcattaac ttagccctgt agaggggaca ctgtgcatat
      241 gtaaagtact agcaaatgga gattgaattt caactactgt tgatttggta ttcaaaaaaa
      301 atactgtcag atcctttgaa atatcttggg aggtcttgtt ctgagcttat tgactgaaat
      361 ttgcatgcaa aattagccac aactgcatga gtatttgaat aggtgccagg aaacccaaaa
      421 gaaggcaatg cttgatttct tccagtgatg ctattttcat gcagtcatga ggcttgaaat
      481 tgacagtttg gcaggttgat ttaatttgct ggccctttgc atattcacca ctgacagcta
      541 aggattccca ggcaagccta ctaagtcggt ttagttatct tgtgacatgc cgacccagga
      601 ggagaaacat tttttcccct taatttagtt agataaattt tgaatgaccc atttcaactt
      661 gctagcagat gtctacaagc tgtttaacat cctttaaatt aagaaccatc cacactaatt
      721 atttcatcta tgttttatgc acagtcattg tactaacttt aattgaatga tggttaaaaa
      781 cacttcttta aaggtaattg ttactgcata gtgtcccagt catgagtcgc aaggccctca
      841 gaaaatcata ctggcaagct tcataaacgt ttagaatttt tgcttctgct cctacttgcc
      901 cacatatact tgaagaggca gcagtaaact actagttaaa tgggtatcac acctt
//
LOCUS       KCKM01002895             948 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45414apa ultra-conserved element locus
            uce-7277, sequence.
ACCESSION   KCKM01002895
VERSION     KCKM01002895.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 948)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 948)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..948
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45414apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>948
                     /note="ultra-conserved element locus uce-7277"
BASE COUNT          280 a          205 c          184 g          279 t
ORIGIN      
        1 ttaaagtaaa ccaacggaat ctgccgagct taagatatgt gtataaaggt gcaattttat
       61 ctgtaacaca atttcatttg gaagcacaca aatcacaatt tgccgtaatc aaataacact
      121 gcggtgctta tattctaatt aaaaaataat ctctgatatt taattgagaa acctggaaga
      181 ctttaccagt acggctacaa cctgcgcaag ccatttgccc agacagatag agaattttcc
      241 aggtagcatt ttttaaaatt ggtatgaaac aagcaaacga tgcgcagttc agtatatact
      301 aaaacgagca ttgtacccag ttattaattt gcactattca cttttaaacg cagcaaatac
      361 ctcattaatt taattttagg tgcccaccag tttatattgc attttacagt ctagaaggca
      421 atttactatt aactggcaat tacatacaga atgattgtta attctgctcc taagtgctag
      481 ctgcttgaaa attgttatct ctctctaatt tttgaccttc ttacaacagg ggtgaggtac
      541 actgggaata caaaggacta gtagagaaga gctggacatg tcatttgtga ctcattcttt
      601 taattcaccg tgctaatcaa ctgaactgcc accatctccc aaggtaattg tatctttata
      661 atagttgaaa gcagcgggca aaaaggcatg gatagatggg gaaaggcctc gccttcgcct
      721 gctgagaggc ggcgcgctcc cgctcctgcg tgagactaat gggggctttt tagaaaaatc
      781 tggaactttc atatctccct agcccggccg tttaatgtct caacttctct tgctcacaaa
      841 ggctttgtgc aaccacacta cactcttgtt tcattacgcc gcagcctcgt tgccctacgg
      901 tctgcctcac gctgggaagg ttaaatgtta gagtgccaag ccggcctg
//
LOCUS       KCKM01002896             780 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45430apa ultra-conserved element locus
            uce-6136, sequence.
ACCESSION   KCKM01002896
VERSION     KCKM01002896.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 780)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 780)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..780
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45430apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>780
                     /note="ultra-conserved element locus uce-6136"
BASE COUNT          209 a          206 c          184 g          181 t
ORIGIN      
        1 gtgggggccg gccccggcgc cgccggtccc ctccgagcga cgcgccacca catctgagcg
       61 ccaggcaact ggttttgtca cttgctttaa gacgtatcct gcctggtctc tcttgtttca
      121 ttacccaaaa tcccagagaa accacccggc aggatcaatc agtcgcaggc agccagacag
      181 ttttcttgta ctttattaaa gtgtaatcaa acatcggtta agtggaaaat aaatatccag
      241 atctaataag ctgctcagtc agatcgtgta aatgcaaatt acaagctggt tcccatctcc
      301 ccgccagggg actgaacaag ccacagcaat tgcttcatcc accgcgattg taaatcaact
      361 aaaataatgg ctggataatg accagtttgc ggtttcaagc agattgaatg ataacaaact
      421 gcgtgtgtcg caccagcttt tcatttagca tctcatcatg gagcgagcag ctcgcctaac
      481 agcttggctg cctcattagg ttgttgtctg cggcttgtaa attcaggctg cagccagcag
      541 attacctgac aaagttcctg atagggaaaa actagacaat tcaatccagc ccttcaatcc
      601 ctccctggga agggggagcc acattgatct atcgctgagg gctgcggtga attgataaca
      661 gtatgatgct ttcctaatgg ggcaatggga aaacatacat ccctcgtatt acgtagagag
      721 acagacagcc ggggagagcc gcgcacagac acagacagcc agcgctcact gctaggctcc
//
LOCUS       KCKM01002897             798 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45446apa ultra-conserved element locus
            uce-1085, sequence.
ACCESSION   KCKM01002897
VERSION     KCKM01002897.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 798)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 798)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..798
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45446apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>798
                     /note="ultra-conserved element locus uce-1085"
BASE COUNT          202 a          187 c          171 g          238 t
ORIGIN      
        1 ttggcatatc cgtatagcaa gcacagcgtg cgtctttcac aaaatcacag gcatgcacat
       61 atctggacac acgtgcacgc acccagactg gggcctttgt acatttgtgt ttattgaatg
      121 ggcttaatac agggcaaagt tccgtttgct ttccacttcc tgacatttca gggagaaaaa
      181 cgtcctgctg tagcctcagt aaaataactg agcgaataac ttaaaggaac aaaaaataat
      241 atccaggttt gctgcagtta aggaattagc ctgccttgct tctgcagtaa agctcctctc
      301 cctctctccc tgtcagtcct gtggcaccct ccctgctctg cgttttaatt ccagtctcta
      361 atctcagccg ctcctgtgat aaattaattg taatgataga ggccccagtt acgaggtctg
      421 caccgtttgc ttgtaatctg agcgacaggt ttagggcctg ctttatttaa gatgcgaggg
      481 taattacatg ggagttagca tatgcaggca gggagatatg attcattctc ccagcgacgg
      541 ccatgacaca gctgtttgtc ggataaaata gaggaaccgt gttgttacaa aatgttcccc
      601 ttattatacc tcattaaaaa caaggctgcg ataagtcaga cctggcaatg aataaaatgt
      661 attgccccct gtaaaagctg ataggagaga aagagggtct tccaagcagc ctcaggtcat
      721 ttatttattt tttgttctct ttcatgctcc ctcttctttc tttccctctg tttttctgcc
      781 ttccactggc tggtggag
//
LOCUS       KCKM01002898             291 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45461apa ultra-conserved element locus
            uce-2135, sequence.
ACCESSION   KCKM01002898
VERSION     KCKM01002898.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 291)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 291)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45461apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>291
                     /note="ultra-conserved element locus uce-2135"
BASE COUNT          110 a           49 c           25 g          107 t
ORIGIN      
        1 taattgacaa gtaaaacaag taatttcttt tttttttaat taactgctct aattaacaag
       61 gaaaccatcc tccccctgaa ttagtttatc taattttcat ctttattcaa agcaaaatga
      121 caatgattaa ttgaaaattt aataagcagt aattattaac ttggcaaacc tagtaccaat
      181 taacactcta ttaaaactaa ttatgacatg tttcattcaa gtgtttgcac ttaattgttt
      241 catccactta aaacccacct taattaaatg tactgtttaa ttaaaaacat a
//
LOCUS       KCKM01002899             240 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45475apa ultra-conserved element locus
            uce-5786, sequence.
ACCESSION   KCKM01002899
VERSION     KCKM01002899.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 240)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 240)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45475apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>240
                     /note="ultra-conserved element locus uce-5786"
BASE COUNT           77 a           42 c           51 g           70 t
ORIGIN      
        1 ggagtaaaag ctgacgtaag aggagctgag cttgtacttg atttgcggag tagcgtgatg
       61 gtcggttggg ctgcgttggc agcatggacc tgtgccagac ttcaccacaa ttcatactgt
      121 gtcagtttaa taaatgcact acttaaatta tgaaattaca aaagaaaaaa gagaatgcac
      181 ttattcagac tcttaataca ttaaaaataa ggcattaaaa cactgccttt ttttttccct
//
LOCUS       KCKM01002900             784 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45489apa ultra-conserved element locus
            uce-3605, sequence.
ACCESSION   KCKM01002900
VERSION     KCKM01002900.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 784)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 784)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..784
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45489apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>784
                     /note="ultra-conserved element locus uce-3605"
BASE COUNT          259 a          142 c          155 g          228 t
ORIGIN      
        1 ttacgtttta agaaacacat gctatgaaag cataattttt aagttatagt gaataaatag
       61 aaatactaaa taataagtat ttggaagata aaatatttcc acctattgta cttaaaagtt
      121 caaagatgta ttcaatgcac agagctgctc tgaaagccac actgaataca ttgcctttgt
      181 ttgtttaggt tctgcacaaa taaatattgg tatgacagtt aaagacaaat ccttgaagta
      241 gtctacccaa taaatttgga acgagaatga agaggaggag gaataaaaaa agcctagctg
      301 tataagattc tctttgttgc ctgcttgtta aggaatcctt ctggcacaac tgaggggatt
      361 atgaattcac atgtgaattt atcccctatt aaacttttag taaaagggtc agttagcagg
      421 aatgataaag ctcaggcaca ccagtcacat gccggcagag catctgtgac tagctctgct
      481 caggcatatc actggtttat agctttaacg tcaagaggaa gctatggggg agggtggaaa
      541 acagtaaaag ttttgaaata gtgcaaagta caatttcaca tgagacaaag gcagcatgag
      601 ttcaggtcac ttttttttaa aaaatagagc actaaaaaga cagtccaagg taatctcctg
      661 tctcactgcc attattcctt taagacttct ttagtacttt ggcccctcag atcttcctct
      721 tttccaccac aagaactcct ggcagcgctc ctggccttac gggtatatca ctgctagata
      781 ggtg
//
LOCUS       KCKM01002901             603 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45504apa ultra-conserved element locus
            uce-3077, sequence.
ACCESSION   KCKM01002901
VERSION     KCKM01002901.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 603)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 603)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45504apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>603
                     /note="ultra-conserved element locus uce-3077"
BASE COUNT          176 a          125 c          112 g          190 t
ORIGIN      
        1 tcctaaccca gaccggtgtg gctctgcagt gcgcgcctct gcgaggttag tgacagcaaa
       61 cacagcacta tctgtgcccc ccatttccct acacccaaca tgtttcacct ttgcgaattt
      121 aaatattatt tctacttgga agtcaaactg ctcatcatcg ccctagtttg actaaagatt
      181 taagctgaag tacgtgagca gcatagaata catttcttgc tcggaaacac aaacagttag
      241 ccaggctcta agtatattat caggcaagtt ctttcagaaa cgtattgcta aagaagctta
      301 acattaatta ttgtaacttt gggaagatta catccacact agccttgtaa gaagcagcat
      361 acacttcttg acctccaatg ctagagcttt aagacacaag aatggcattt taccaacttt
      421 aatgggataa ccagtattaa tctttcagca gtaagggaag aaaaagtgtt tagagtataa
      481 tacccttctg agttctgata gaggctgcct gttgtgtgta ctgcaatcat aattcatttg
      541 tttctcgctc ttgttttggt tttgtttcgt aattatttaa ggagaaaatc gtactagatt
      601 ttt
//
LOCUS       KCKM01002902             958 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45520apa ultra-conserved element locus
            uce-249, sequence.
ACCESSION   KCKM01002902
VERSION     KCKM01002902.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 958)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 958)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..958
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45520apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>958
                     /note="ultra-conserved element locus uce-249"
BASE COUNT          283 a          215 c          209 g          251 t
ORIGIN      
        1 ctccatccaa gggacctcct ctaaatggga aagatcagga aataccatag aggaatagac
       61 ccttgatggt ctggtatggt tgtcctgaga gctagtgacc tgagaaatac gtaccaagaa
      121 gtagctcctc tggtggcaaa atctgtgttg taaccctgtc gtgcctcctg acatctctac
      181 agggtcctct ctctgtaggt gaccctacca aaactatcct ggctggtcca tcggtgggaa
      241 gacgagaggt gaagtgggca gcatctgcac tgcaaaaatt ccttaaaacg tcatttgtca
      301 gaggaaagga aaaacaaatt gttgcaagaa gtgcggaagc ggagacgtcc aaaatggtag
      361 ctccactaaa ggctttaacg tgctagaaaa tttatgaaaa catgaataaa aggtaactta
      421 ttcagtgtca gccttacata tttatagttt aaaaattagt caaagtttat gtcctgaggt
      481 tgcacctaca ggaagccaga tgtgtgcctt ctgcatgtga cctaagacag gcctgaagca
      541 acaactagat aatttctcgc tcatactcca caccgtcgat cgcggcggct ttctgaggtg
      601 agagaatctg acagcactaa ctctccaggg cagaactttc cagtcaagtg gatcaacgga
      661 ctgaaaatct cttatgaata gtcattaggc cttcattaca aacccctcac aacccagttc
      721 tcttttcgca accaaatgcc ttttgtcatc ttcacaaggt gcatcattta attaccaatt
      781 gatttcttta tatatgacaa catgtcagat agcaaaatac agtgtatctc ccttaggggg
      841 agaagtctgt taactatcag cgtgccagat tactgaattt agctggaaga cagctattcc
      901 ctccactgcg cctttatttt aatttccaga cgagcatcgc ggggaaagga aggcgcgt
//
LOCUS       KCKM01002903             313 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45536apa ultra-conserved element locus
            uce-4294, sequence.
ACCESSION   KCKM01002903
VERSION     KCKM01002903.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 313)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 313)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45536apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>313
                     /note="ultra-conserved element locus uce-4294"
BASE COUNT           95 a           61 c           56 g          101 t
ORIGIN      
        1 taataaattc ttggaaagcc ttaaatctga tccttaagtt tgacagatgt gttgtgtttg
       61 tgaggtggat tttacctact gtagctccgt gtcctcttga gtacagctaa gaaaaacctg
      121 tgagattgtt aaatgggagc ttcacctgcc agtctgtact gcaagatctc tatagcaacc
      181 aaacataaat caagaaaatg gccccttttg taagttggtt aataggcaca acatgcttct
      241 ttagaaaatc caactattct ttcaatagac tttgattgaa agtcagcctt ttctacagac
      301 acattcacat tca
//
LOCUS       KCKM01002904             797 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45552apa ultra-conserved element locus
            uce-1306, sequence.
ACCESSION   KCKM01002904
VERSION     KCKM01002904.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 797)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 797)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..797
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45552apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>797
                     /note="ultra-conserved element locus uce-1306"
BASE COUNT          222 a          140 c          189 g          246 t
ORIGIN      
        1 actgttggct aacagtctgg aggctgcttc gtttgagcta accaccacat gaaaacaaat
       61 gcgatccatc atatttcatt aactagctgc cccctgttcg ggtgcccttt tttgatgtca
      121 gagcgcatcc tgacagaaat cagaaagata tgtgtgatta agaccggtaa taatagttag
      181 tgcattgtat tgtaaattac ctttttgggc ctcggtactt tatcagcccc actggccttg
      241 gcttgggtac atttttgact actctgtata tacagtgtat tagcgcaatg gagatcatta
      301 tgtggcctgt atttgagtca tttttattta agatgccaaa caataagctg ttgattgggg
      361 gaacaagagg cgaacaataa tgttctgtgt cacataatac accaccattt tccagctttg
      421 ctttagaagg gccctcttta ttgtttttgt ataaaaatgg ttcttaggag gaggaatatt
      481 ttgctgaggt atgtcattat tttgcaaatt tctattatct catcatgttg tcttcattgt
      541 aaattgcagc taattaggaa cctagttaga gccccagctt tgaggctggc ttttttgtga
      601 aaagagccca ccgattaccg cactacaaga gaggaaggga gagaaaaagg agattaatct
      661 ggttacctag gcgacactcg cttccatctg cgaggaacaa tacatttttg tttccttggc
      721 tcagttcaga tctgttttgt ttagggggga aaaaaaagag agagggagag agggagggag
      781 agagagagaa gaggaga
//
LOCUS       KCKM01002905             811 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45566apa ultra-conserved element locus
            uce-380, sequence.
ACCESSION   KCKM01002905
VERSION     KCKM01002905.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 811)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 811)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..811
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45566apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>811
                     /note="ultra-conserved element locus uce-380"
BASE COUNT          232 a          145 c          152 g          282 t
ORIGIN      
        1 tctatttatc tatcgagata cagatatatt aaaaattgga aggaggttct tcaaccttta
       61 aatcctttca tatcacttta tgttcctgct gttaggcttt tgctatgtta acgtcatcct
      121 gtgttggtaa tatttacagc acctaaatca atgttgagga catacagaat attgaaggat
      181 caactctact tatttcaaat gcacttcaat attttgactg cctggccaga gtttgggaaa
      241 taactgtggt ggaatgataa tgagaagttt aacagtttta tgatggttgg agcggacttt
      301 atggaagttg ataaatttcg tcttgtaggt ttcaatttct cattccctac agagagatgg
      361 ggagaataca ttgatactgc atttcaaatt ggctggatca gaaagaacag cagctaaaat
      421 ccattacaac ccaattacat ccatcagctg aagctgtgtg cactcattcg tgaacatcag
      481 catttaatcc ataaagagga actaatgaga aatttgaaaa tggaatccat gcatcagtaa
      541 ctttggagat attttgccgg gattaatgaa ctgccagaac attgtcaaca cactgaaaac
      601 ctattctctc taggtttgtt tactgaccaa agaaagaatt tttttttttc cttctcccta
      661 ttcttcaaca tgtctttgtc ttatgggttg ttgcttttct ttcttatgtt cttggtgcag
      721 gaagtgacat tttatccacc tgaagaatca aatacttgtt tctcgttcat ctttctctta
      781 tgggcatccg gctggatggc tggatagctt c
//
LOCUS       KCKM01002906             608 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45581apa ultra-conserved element locus
            uce-6161, sequence.
ACCESSION   KCKM01002906
VERSION     KCKM01002906.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 608)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 608)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45581apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>608
                     /note="ultra-conserved element locus uce-6161"
BASE COUNT          193 a           99 c          128 g          188 t
ORIGIN      
        1 ttttttttaa gtggtcaacc agcttcattg gatcacaggc tattttttta attgcaaaat
       61 ttattttgcc aggctataaa ttaattcacg tgtatcagtg atgatctttg ctacggtact
      121 gctgactttg tactctaaga cagtcaggca ccgagtgtaa atttcactgc ctgactaaaa
      181 gtgcagagga aatgagtggg taatgagagc agagcagcca gttctttaat tgaattaaaa
      241 gctgggtgac accaatgcag acacctgtcc aattacagac aggccaaggt gtttaccatt
      301 gctgtacaag cgatttgaag atgacagaaa tctttccgcc cacagattaa cataatgaag
      361 gagaacagat tacagtggat gctggccaaa cagataggtt ggcagctgag aaaaaagtag
      421 tttgctgaag tatgtaaata aaatctgtgc actttctatt tcttacctat gcagcacatc
      481 tgtttattta ttgaaagaaa atagtgcaag aatacatgtg atggaaaaac attaattggg
      541 aagtagacaa attatttttt aagttgctgc cttttttttc agtgtaaacc tgttgcaaaa
      601 gggtttct
//
LOCUS       KCKM01002907             938 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45596apa ultra-conserved element locus
            uce-3281, sequence.
ACCESSION   KCKM01002907
VERSION     KCKM01002907.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 938)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 938)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..938
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45596apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>938
                     /note="ultra-conserved element locus uce-3281"
BASE COUNT          254 a          180 c          176 g          328 t
ORIGIN      
        1 atcttttcct atttcacagc aactttttta catatttatt tgctgggtta attgcttaga
       61 ccccgatcct tcagtaaggt tctaccaagt tgctagataa aaagttattt taaaaaaaat
      121 gttgttaaag atgtggcatt caacatactt tgtttctgga aggggaagaa taaagcagca
      181 gtatgtgaat aaatggaaag tgatgttgag tgatctaaaa aatagaaaat aattttcagc
      241 ctgaaattgc aatttgcagc agcattgcca acattcagca ctaatgtctt agcacagctt
      301 cctgccactt caagcccctc tcttttactc tgttgcctac cctgactccc ctagcgcatt
      361 tttatggctt taatttaaac gagtccttct tgatatcttg tttacaaagc tgccaaagtg
      421 aaaaatacct gtattatatg aggcttgcag ttccagagtt atctcagcac tacaacacaa
      481 catcattatc cagtctgccc cttatcactc agctggtaat acgggctgcc gagagacttg
      541 tgccactttt gttacagctt tatatgctcg ggcttattgg tgatatcttg ctccccaact
      601 ttgtaaagat cttgaagcca gtacaagcgt gagactgttc ttggaagatt agattcttct
      661 tagtggtttt tttttttttt cttcttgtag aaataggtga atcatagaaa gtaacttttt
      721 gatttatttc actatcttct tgtcaattga ctaaaaaggg tgttgtgagc tgctaaggaa
      781 agggtgtatc tttctggagg gctttttaga gggctcagct gtgttgtggc aacgatacac
      841 agaaaaattt agttactagc tagtgtagct gtccatgaga ctccagctgt cacttcctgc
      901 atactttttc tgttttcttg cataaagtct catattct
//
LOCUS       KCKM01002908             967 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45610apa ultra-conserved element locus
            uce-2952, sequence.
ACCESSION   KCKM01002908
VERSION     KCKM01002908.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 967)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 967)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..967
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45610apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>967
                     /note="ultra-conserved element locus uce-2952"
BASE COUNT          344 a          175 c          165 g          283 t
ORIGIN      
        1 atgtaagaaa tcacaccgtc ttcaataaat ctaaaaagac attagcattt ttgtctctaa
       61 tacaagatat ttcaagcaag tagtaaaatt tcagtggtat atggaagggg tcttagagaa
      121 acacacacaa aaaaatacga ctataaacaa gccatcattc tggtaagagg aaatacaaac
      181 aaccagaata aaaatagttg atgcacaaaa gccataatga gggggttgct caaaaaataa
      241 cttctacttt gaatggtttg gatgaaatac aaattatcca cagaaaagtg tggactggca
      301 taaatgtttg tacaaaatta taagtatatt tctagaagta tgcaagagac aaccgcctgc
      361 atgctgcaca aggtcccaac aacgctctgc ctaagtgcta gtgcacagag tccaaaccac
      421 tgcattttaa ttactatgca gcctcagata tattgccttt gatatggaaa tgttcttgtt
      481 ctctcatctt cacatacggt ctcatgcaca gaaatcttta tctgattcat aaaaaataaa
      541 ctagaatcca atctcaacac ctgacctcag tgcttagaag ttttttacta agcatggtgt
      601 cactataaaa agaatgggta atattggtgt aaagtcagat atttggagca atgatatgag
      661 ggatttgcac ttatgaatca aatcgatact gcacctctga ggtttcagag tttcctgttg
      721 ccttatgtca gtctaccagc aactggagaa acaattgact gtacaccttt ctgtctagct
      781 caagaagaaa gaaaaaatat ttaagtgaca tcctgtctta ccaccgatag aaaagatgca
      841 gcttagctac ttgctgtatg aaataagttc tgaaacctag taaatcacta acatcaaact
      901 ttcctgcctt ttttaatttg tatctaacat ttttgtgcac attttaaagg tatgagtata
      961 aagttca
//
LOCUS       KCKM01002909             617 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45625apa ultra-conserved element locus
            uce-3549, sequence.
ACCESSION   KCKM01002909
VERSION     KCKM01002909.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 617)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 617)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45625apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>617
                     /note="ultra-conserved element locus uce-3549"
BASE COUNT          213 a          121 c           89 g          194 t
ORIGIN      
        1 ctttaatgct gtagagcctt atcttttctc atactttttc ttcagccttc aaagatacaa
       61 aaggcatcta aaacccatac agagcgttaa atcctaaata ttttctaagc agctatgatc
      121 tacttgccac attagagttg taaattaagg tctcatgtgt tgcagaaacc agccttccat
      181 atcacagttt tttcccctga atgaggcaag agtcagtcag taaatatatg tggtcaacct
      241 cagatttgcc tcactgggag ttcacatgta tttttaactg ccttcaattg ttaatgtatt
      301 cctcaaatga gatgcatcac cttgaagaat gactttttgc cctctgggaa tatgccaaac
      361 aagtatttca ttcactatga taatcagttc tacctccagc aacatatgaa acccaaattt
      421 aataggcact agtgattagg ttttaagaca cagagtcatc actgtccact gtaacaataa
      481 taataataat aatatggaaa aaacaagaga aaaaaacact atatttgctc tcgggaatca
      541 ttaataaaag cctagtaact atcaacattt tcataacatg cttaagaaat attatgtgtc
      601 ttgtcactaa ataaaaa
//
LOCUS       KCKM01002910             918 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45640apa ultra-conserved element locus
            uce-3477, sequence.
ACCESSION   KCKM01002910
VERSION     KCKM01002910.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 918)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 918)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..918
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45640apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>918
                     /note="ultra-conserved element locus uce-3477"
BASE COUNT          253 a          174 c          189 g          302 t
ORIGIN      
        1 tttaatctct tgcagtgcag tggcacagtt tcttacggtt tgtcagacca atggctatga
       61 ctgcagctgg gatgagtatt tattattaat actgcgttta ctatcccact aaattctttg
      121 agacaatgta ccgttaagca gtatgaggct gactgaagtg cctccaccat ttaggggtta
      181 gcaactaaat ggcattatat aatttgagcc aatttctgcc caagattcca gggagtgaac
      241 tcatcaggat tactcattgt taaaggagtg cctcagggtt tagtactttg actttattat
      301 tttttccttt agctattcaa aaccttggtt catttatagg aaatgttaat tatcctttct
      361 atgctgatat cccactgctg ttttataagc agagctttgc ttgtacaact tcaaaagaaa
      421 tcttcaaact caatattacc aagtttgaat attatctaat taacctccca gtctgtcatg
      481 ccttgttggt tatcatgaaa taatcacagc ccctcaggtg ttgaagctct agatgcagct
      541 aagtgcctct aattccctaa gggggtgatt agctcatgat aacaatgctc ccttgagttg
      601 ttttattgct tttataaaaa gactttattg tgggggaaat gtttattttt atgcaggagg
      661 aagatgtcgc tgacagttga ggctggtgag tgactgtagc tgttactcct gagccatggt
      721 gcaaaccttt ttgctcattt ctggtactcc ttggacaatc acaatatgcc ggctggtaat
      781 taagctcctg ctgaattcac agtgtggaga gagaaaataa atacttctgg ttctgccaga
      841 gatgagcagt taaaatgaga caaagcaaaa tgaagttcct tctgccacag agatcataac
      901 ctccagagtg tggagtac
//
LOCUS       KCKM01002911             676 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45655apa ultra-conserved element locus
            uce-2614, sequence.
ACCESSION   KCKM01002911
VERSION     KCKM01002911.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 676)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 676)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..676
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45655apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>676
                     /note="ultra-conserved element locus uce-2614"
BASE COUNT          233 a          128 c          107 g          208 t
ORIGIN      
        1 ggagtaaaaa ttgtcaggag gaatttaagc agcgtttaaa caacttctct tgcaaatcag
       61 aacatctttc aaacagaaat tgtatttaaa tctggaaaac gaagtgccct ttccctttag
      121 ctacgaaaaa ataaggttat gaggaataaa agtgatgaat tagccactgc gttaagcgat
      181 aataaatcag gcttggtgtg attcacgatc aattccaatt agtcatgaat atgctaagta
      241 aagcacagta cactgtttta gacagttatt tcttcattaa ggatcactca gtgatttctt
      301 tcacaaatgc tctaatctga tttccttttg atttccatta gagacagtga ataatgacat
      361 ttaatttagc cctgcaccat aaacccaaag atatttgttg taattgaatt actgcctgct
      421 cctcactatg gtctcataac tttcaattat aaccctgaca gctgggtgat atgagtttcc
      481 agtacaacac taaaaataaa aggttaataa ggactagcta ccataggagc ttcaatttat
      541 ttacagcaaa tttccacact aaattgaaac tatatccttt aacagcaagg gacaagcggc
      601 tcagatagga attagagaac aattctgaaa gtattagaaa aaaaaccttc ctctttcccc
      661 tcctttttcc atttcc
//
LOCUS       KCKM01002912             205 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45670apa ultra-conserved element locus
            uce-5495, sequence.
ACCESSION   KCKM01002912
VERSION     KCKM01002912.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 205)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 205)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45670apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>205
                     /note="ultra-conserved element locus uce-5495"
BASE COUNT           78 a           21 c           30 g           76 t
ORIGIN      
        1 agactgtaca taaaaaggta attttaatta atttatttat ttctttacac ataactgaaa
       61 gtgatgttac agtacataag ttatttacaa ctgtgcagta atgtgttgca aaataaatta
      121 tctagaaggc agcaaaagta cattgttaat gtatataaaa actgtacagc atttatggga
      181 tacaattttt ctttatatga gtatt
//
LOCUS       KCKM01002913             311 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45685apa ultra-conserved element locus
            uce-7162, sequence.
ACCESSION   KCKM01002913
VERSION     KCKM01002913.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 311)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 311)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45685apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>311
                     /note="ultra-conserved element locus uce-7162"
BASE COUNT          100 a           36 c           67 g          108 t
ORIGIN      
        1 attggtcagg tacaaaaaga aactgcttag tatttgaagg aatttgataa ttttgttgta
       61 gttcgtagct tggcaggtgg taataatgct atgccagcac tgtcaaaata tgaaaattaa
      121 agtgacgatg ggttttaatg aaatccattt gacaaatata attaaggtgt tttaatatga
      181 agccctgtaa taaagactac cggtggactc cctgaggtcc tgactaattg tgtagattgc
      241 ttttaagctt tgaatagttt tattggataa tgaactgtta agaagtgtta gatctttctt
      301 aagcagaatt t
//
LOCUS       KCKM01002914             503 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45700apa ultra-conserved element locus
            uce-3830, sequence.
ACCESSION   KCKM01002914
VERSION     KCKM01002914.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 503)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 503)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45700apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>503
                     /note="ultra-conserved element locus uce-3830"
BASE COUNT          123 a          112 c          101 g          167 t
ORIGIN      
        1 ttccccttgt gtttcaacgt agattttcac aattttagag gagcgaatgt gcagaacttg
       61 tgcttccttc gtgactggaa cctttgcaga gtttttatga ctgctcttaa aactacagtt
      121 taaaagtttt gcacgtttag caggaatcag ttttcgctgc atgtctcctt ccaaatctca
      181 tcttccccgg gatgagtttg ctcccaaatg aagtagaggc gttttccttc aggctgcatg
      241 ttatcctctt atccctactg ttttggaata gagcgtaacc agctggagaa ctgtaagaag
      301 cctgataatg cagctatttt ctgctgtccc gtcttaatct tgttacacaa atggttgtga
      361 agagattcat gaattttaat tttgccctct gcattagtgc ctcatgtcac tcatacacag
      421 ctgccttcta tggggagttg ttcacccctc ctcctacaac aggggaaaaa attagttaca
      481 atcttggcag tagtgcaagt aac
//
LOCUS       KCKM01002915             698 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45716apa ultra-conserved element locus
            uce-7171, sequence.
ACCESSION   KCKM01002915
VERSION     KCKM01002915.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 698)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 698)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..698
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45716apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>698
                     /note="ultra-conserved element locus uce-7171"
BASE COUNT          222 a          150 c          119 g          207 t
ORIGIN      
        1 gccattttca ataatataat catatacaga agcttccaag cctggcagtt atttggacag
       61 ctgtcaatca aactgtctca cagctaccct accgtgtcag ccatcagcta acccacactt
      121 tcccagggac gtcttagcat ggcatctttg ttctgttttc agataaacag atccaatttc
      181 tcaacaaaca gactgctaca gtccttttga taacaatgta ataattcaaa acaaatgatt
      241 ctaggctttg atgatagcac ttttatgggt catgaagaaa tcctcccacc aacatctgtt
      301 tgattttatc tacttgaact ttatcctcca gttgaagatt tataagctga aatcatccca
      361 gcctattaaa gtcagactaa tgttaaagca ctaacacaga gaatgaaagt gcattttgca
      421 gtcatccacc ttttgaaatc ctgctgtgag gaaaagatat caaaagtttg aggcatgtat
      481 gtttaagtat gctggaagtc tgcattctgc acagagccct gcatgactga gagattaagg
      541 aatctaactg ttgccctaca gtaggcacag gttatttaca gaaccattat ttagaaagac
      601 aacacgaaaa atacagatgt tgtttacact gaaagattgt tttcttagca aaaaccacta
      661 tgggtgatgg aaattcactc cagatttgtc tccccctc
//
LOCUS       KCKM01002916             614 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45732apa ultra-conserved element locus
            uce-4234, sequence.
ACCESSION   KCKM01002916
VERSION     KCKM01002916.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 614)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 614)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..614
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45732apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>614
                     /note="ultra-conserved element locus uce-4234"
BASE COUNT          208 a           94 c          111 g          201 t
ORIGIN      
        1 tttttttctt gtttgctaca gttttattgt agtgaaatat gttcatttta gcaggggaaa
       61 actgccctaa atagacagca taagagcaat aagatgtcac attgcagagc acaattttta
      121 aatgatgtgc tctagaagta aggcttttag acattttggt ttatgtatta aaacttctca
      181 caaatttgat tgggaatgag cctttgatgg atatttgctg cagttatgct gcattagact
      241 cgatttatcc accacctctc attgttgcta ttgattgatt tttaaattag atgaaggcaa
      301 tcagtaaata ccacccaatc aagtcctaaa aacatacagg agattagaca atttagggta
      361 atcaatgaaa atattctgtg atttgctacc actcaatttt gaccataaat tacaaccata
      421 acttgcaagt tagtaagcca taaaacaagt ggatgtgaca agaaaaacta taagaaatga
      481 attaaggaga tgaagaggaa ccgctagtgt tgtcatttaa tgagataaaa ttactcttta
      541 tacatatctt gcatttttag ttgagtcttg ccaacagtaa tggagtacaa gagcgtgaac
      601 acttctctca ggtt
//
LOCUS       KCKM01002917             860 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45747apa ultra-conserved element locus
            uce-3141, sequence.
ACCESSION   KCKM01002917
VERSION     KCKM01002917.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 860)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 860)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..860
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45747apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>860
                     /note="ultra-conserved element locus uce-3141"
BASE COUNT          289 a          154 c          126 g          291 t
ORIGIN      
        1 ttcaatacat gccagtattt ttttaaatct caaagtacag ccaaattttt tgctgtcata
       61 aaatgcagag tcatatctgt gtctagctat gtatagcaag acacatagcc atattaaaat
      121 gcaacagaga attcccatat tgataacact aatctgcctt ggtttgaata aaaaattgca
      181 caccacaaaa acaactgcaa aattaaagca atatactttt gattttagta caaaaataag
      241 atataatgac gattcaagaa agacttctgt ttcagaaaca gttcctagct taaaagtcat
      301 atttcagtta attatagatt tcttactcac taaaatttaa agatacattc actgattttt
      361 tttttgctaa atgttgactc cagtgaacag ctctctaaga tctggcatat tgatttcttg
      421 ttgtgaagtg agctgttcaa gctccattta agattttcat cttgcatgta gccctgagca
      481 catcatagca ccataaatta gttaaattgc acatttatca caaatgttat tttaagatac
      541 tgcgtaaatg cgatggctgg aagatataca gtatgctgca acaagccact acttgggtgg
      601 ggttagacca gggtcacctt tatacacctg tgatttaaag ttcttcccac ccatcacaat
      661 ttcattttta agcactttct tgaggcattt tgttttctct ctcatttgat ctgcatattt
      721 ctaaataaaa tatcaaatgc aaagcaaaag tcagaaccca gatgcatatt ttaaaatcct
      781 gcatccatac cttcatgttt gtctaatagg aaaaaaaatt atcttaacat agctaggttg
      841 gtgatttggt tagcattaat
//
LOCUS       KCKM01002918             570 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45762apa ultra-conserved element locus
            uce-4983, sequence.
ACCESSION   KCKM01002918
VERSION     KCKM01002918.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 570)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 570)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45762apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>570
                     /note="ultra-conserved element locus uce-4983"
BASE COUNT          181 a           86 c          116 g          187 t
ORIGIN      
        1 aatcttcaat gttatttttt aaaattacct agagagattc tttctggact attaactttt
       61 tttagtattt agatcacaac tcctaaagac ttagctatat tttgacaggt actgacaaag
      121 agtgccatgg aattgtgact cagttgtcac cttcggcgtt ttcaagctga aaaactcagg
      181 atgagtgcta ggtactaatt agaactgtta tattaggaaa gcaaatacaa tggtgtctaa
      241 cattaaacaa agcacagttc tcatcacaaa tggtttcttt tgtgtgcggg ttagtctaaa
      301 aaaccatttt gcatgctaat gaggcacaaa caataattgc caaagtaact agtttcacgc
      361 aattacaaaa atgacataaa aagccctatt gtttgttgtc ttgtgatttt taatgttaat
      421 tttttccctg ataatttggg tatttcattt gtaccacagc atgcaatttg gattatgtgc
      481 atgtgaaggt gaaggctttt aatgaggaat aaggggtagg gtgagtcgag cctgagagtg
      541 ccgaagtaga agaaacagtg actctaaggg
//
LOCUS       KCKM01002919            1152 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45778apa ultra-conserved element locus
            uce-3406, sequence.
ACCESSION   KCKM01002919
VERSION     KCKM01002919.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1152)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1152)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1152
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45778apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1152
                     /note="ultra-conserved element locus uce-3406"
BASE COUNT          337 a          227 c          228 g          360 t
ORIGIN      
        1 ctctgcacag gaaaacaaat taagcaaatt ggtaactaaa actttctcaa atgcaaaact
       61 gaagcttaag caaaggagtg gcagattttc cctggaaatc catgaggaca ttaggtggaa
      121 gggtgctgcc aaggtcttga ccacagtggg atactgtgct gtgccttttc agggtagcag
      181 taacaccgat gcaggagtat aaaaaggtta cagctgtgct gcactgaaat ccagtcttct
      241 gaatccagca cttcagaagg ttttgtgtgt cactggcaag aaataatgtg aaatgagcaa
      301 agacatcaat ttcttttata catgcacctg ggcgtgtgtg cttatatgtg tgtatatgca
      361 tatatctggt gtatatagag agaagtgaac attcttaaaa gctatatatg tatatgtgta
      421 gcatcttata catataaata tatggtccat ccttctaatt ccatgcacaa ctgcactgta
      481 accattgtgg tttataagat cacacttcat atatgcatga ctcactggct tcattcatgt
      541 ttccatatgt gtgtagaaac atagcaaagc agacattcct agagacattg caggacaacc
      601 tcattgagat ggacattctc acctcctccc gacatgacgg tgcttacaat gatgggtatg
      661 tgacacttac gtggtcttcc tgtttactgt gcagtcatta tgatccttgc atgaaagcat
      721 ttggtcatat caacgatgtt taagggcaac accattgctg gcctcttcca agatggcttt
      781 aaaaacatga ggttctgggg cttggagcac tgtgtcttgt ccatattaac tgcagactca
      841 ttaatatgcc agtgagccac agcatgccat tgttgttttg aaagtcattt cattagtaag
      901 aagtacctac agcaatttgg agtcccttat aaactaagat taatttaatt ttcataaata
      961 tcttaaacca ctagtctgct ggcagcctga tacttcatta ttaagctgat ttaaaactga
     1021 ttccgcatat cttataagtg tctactagtg ctgtgcttaa gccaggcttt tgattttgac
     1081 ttaaccaccc gtactggcat ctttatataa cgtctgatca cttagctttt aagttatcag
     1141 cagctttcaa ct
//
LOCUS       KCKM01002920            1150 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45792apa ultra-conserved element locus
            uce-5602, sequence.
ACCESSION   KCKM01002920
VERSION     KCKM01002920.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1150)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1150)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1150
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45792apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1150
                     /note="ultra-conserved element locus uce-5602"
BASE COUNT          345 a          220 c          223 g          362 t
ORIGIN      
        1 agtaaagatt tgcctaattt ttacgagaca gatcagtggt ctgaagactg gccatacttg
       61 tttattcaga agtgattaat gtatttcttg agtgcagtta ctaattttct caaagtgctg
      121 ccttttttga gataatttgc agtttcatgt cctcatcaaa aacctcaaaa ctgaaccttt
      181 acagtataca tctcaaagga aacaaaattt tattagtgac tcgagtacag aaattcctta
      241 aagagttttc ctaacatttg actgaaatgg ggctaaattt gcgataattg ggcttctact
      301 acgcaaacga ggacgtagtt tttacactgc gctttccttc agttttacac aacgtttttg
      361 taggttgtca gcgtaaattg tttccatcta cacctgatgg agaagacttt gttcctgatt
      421 gctctatatc tccacccctc tgaatttttt ttcaataggt gcactaggcc ttccaatgag
      481 gggaatgagc aacaataccc ctcagttaaa tcgcagctta tcacaaggca ctcagttacc
      541 gagccacgta acgccaacaa caggggtacc aacaatgtca cttcacacgc ctccatctcc
      601 gagcaggtat ttattgatag ccactatttc tgcggttgtg tctttctgca gagctcctgt
      661 taagtgttct gcatattttg cgtcgactac tttgcagtct ggttgattaa aaaggaagaa
      721 aagtagttcc cattgaccac tgcctctgtt agggaaataa taccgtaaaa cagcaaggaa
      781 gagagtattt gatttttgta tgtaaaggac aaattgctgg caaattctgc ttcagaatgt
      841 aagaggctgt ttctggattg ttctggtaaa agtacagtta aaatttttgt atgggcgtcg
      901 tgcacaatac gagaatatta aggtagtagg tctgaagcgc ttgttaaaaa aagagctgta
      961 acgccttttc agatgcataa tacttaagta tttatctaaa gctgaccaag gacttgatta
     1021 gtatataatg ggtcatctgg tatttctgaa gacatccaaa aactacatta attatagaga
     1081 gtaatccaaa catgctatat tgacgctaag cacaaattaa gttgcaacag ctcagagtcc
     1141 gtcctacatt
//
LOCUS       KCKM01002921             707 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45807apa ultra-conserved element locus
            uce-5620, sequence.
ACCESSION   KCKM01002921
VERSION     KCKM01002921.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 707)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 707)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..707
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45807apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>707
                     /note="ultra-conserved element locus uce-5620"
BASE COUNT          179 a          185 c          202 g          141 t
ORIGIN      
        1 cctggcagtg ccagctggat cagaaatcgc ctcgaaggcg actccttgcc cccctcccag
       61 cctggctggt ggacgccatc acctctggct gctggatgag tcagtgtctc agctcagctc
      121 agggaccgcc gtgattttat tcctctaaat acagaaattg tgcagagttc agtccttgcc
      181 tctccctttc gggctcggat ctgccttgct gttattagac tttcatatac agcaagcacc
      241 attaaaccca ttccgtccac ccaacccagc cacccccaca gatactccaa gcccctcagt
      301 gttacttgaa aggggaaaag aaagggccag tgagatgatc agggtggagg agaggggggg
      361 taagatttac aagtgaatgg aggtaagaat ggagcagttt gtgggataaa ggggctgcag
      421 agggagcttt acagatgtgc agagggacgg cggctcattg tttaattaag cagaaagtgg
      481 ctcttttgaa aagcaatttt gcacaggagc tctgagctca gcaaacaact cctgcgagtg
      541 agggcaggag gagaaaggaa cagctggccc ggagccgtgt gaaccgcatg ctaagcggtt
      601 taaagggccc agagcctcct ccccagccct gctccgctgc caccctctga acagcgctgt
      661 cagcacagca aatcccaccg agagaaaaga gagagcaggg agggggg
//
LOCUS       KCKM01002922             835 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45823apa ultra-conserved element locus
            uce-2156, sequence.
ACCESSION   KCKM01002922
VERSION     KCKM01002922.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 835)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 835)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..835
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45823apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>835
                     /note="ultra-conserved element locus uce-2156"
BASE COUNT          251 a          169 c          163 g          252 t
ORIGIN      
        1 aaacaatgca gcaattcttc tggtctctta attaggcttg caaaaaattc atatggtcct
       61 ttactgttta cagaggggta ctaccctggg atttgggaag ccattatttg catgagtcaa
      121 aaataagctt ggcttcattg ctgaatctct gtcttggcag gggaattcaa tgccaaattc
      181 tcagggaaga agaaaagtca tgtgtccccc atttcaagtg acaattcaac agtaggaatt
      241 tctactcttc tatatttgag gtaaccacca gattgttcaa ctgaaaacaa atcaattcat
      301 cctaacccca gtattgtaac cacaacttca gtttgaaaaa cgcgtctcat cctattgaat
      361 gccaccaagc atgtgcctta tcctttagct caaatatatt ttgcatgacc ttacatgaat
      421 tgcttagata aaagcctttt ttcttctact tttgttattt taaagtgcag atgcatttga
      481 gtcattttcc ccttttgttt catatcctta agatccacag cttcaaagac aaaatgtcag
      541 catgcagtcg atttatgact gaactcttga agagacactg aagaattacc ttgtcaatca
      601 ccccaaggac tctgaaggcc ttcagttcct cggcagggct ccttaggttc caagagggcc
      661 ttgaacttag tgatcctgga ggctaatgga agatatcaaa gattatacat caatcagggt
      721 ggtacttgaa ggaagactgc ctgctgaagc aaatgccagg ccgaaggaaa ctagatttat
      781 cataaatcag agagagtgaa gatgaaagga gaagttttct gtttgtcctt agtgg
//
LOCUS       KCKM01002923            1131 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45838apa ultra-conserved element locus
            uce-1252, sequence.
ACCESSION   KCKM01002923
VERSION     KCKM01002923.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1131)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1131)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1131
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45838apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1131
                     /note="ultra-conserved element locus uce-1252"
BASE COUNT          324 a          198 c          239 g          370 t
ORIGIN      
        1 tttaaactac tgagaccaag agttacgtat attcatgtac tgcagttgtc agatttgatg
       61 gaaaactata gcccctgtgt ttctcagagt ctgactgtac gctctttgaa atgtgaagat
      121 gaaaattggg atgctaaagt ctggctttta attaccacta actcctttgc caaaggcttg
      181 aatgttcctt gtatgccggg cacctttact ccaggagcca gtctctaaaa acggtttttt
      241 gttgaaaact ggagagacga agtggttgta ggttcacatt acctgtgagg tgacacttgg
      301 gagtgcccag gcctctgaac tcaccctttc tctttgtgta ccatgccact gttttgaaag
      361 tctaagcctg tctgttgaac agtgagtttt gtctgtgaaa gtttcatgta gtttcagtgg
      421 ctctgattga ttcagtagat atacaaaact tcttggcgag ttagtatgat ttgtatgtga
      481 attttccaat tgtatttcag accttaagaa agaaaggcct taatggttgt gagagccctg
      541 atgctgacga ttactttgag cacagtccac tatcggagga cagattcagc aaactaaatg
      601 aagatagtga ttttattttc aagcgaggcc ctgtaagtac ttttatttta tctctacttt
      661 ttatttgttg atccttttta ttaacttcat tatttaggct ctgaacaaga aggaacacag
      721 agggtgcgac agcccggacc ctgacacttc atatgtgctc acgccacata cagaagaaaa
      781 atataaaaaa attaatgaag agtttgataa tatgatgcgg aatcataaaa tcgcagtgag
      841 tactaaagta tggtttgtgc ttctattaca tgcatgagaa ttttcatggt gtttgcttcc
      901 cactgaaaac aactgcaaag acacgaggat gtagtggttt gagaaaggaa tacatatttt
      961 tgaggaaacg tgaaatgctg gtacttgatc ttgttagaat acattttatc ttaaagaata
     1021 tgaagattta tctctagctt cccttttgaa ctgggttttc ataccttgtg aacatgaggt
     1081 agcatttcta agattcggga gcctagctgt attgcctaat cctacctaaa a
//
LOCUS       KCKM01002924             886 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45854apa ultra-conserved element locus
            uce-2648, sequence.
ACCESSION   KCKM01002924
VERSION     KCKM01002924.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 886)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 886)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..886
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45854apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>886
                     /note="ultra-conserved element locus uce-2648"
BASE COUNT          297 a          183 c          200 g          206 t
ORIGIN      
        1 aaacacaggc ctcgccaaaa agaagttcct ggcaccatca ccatcctgat atatgcatat
       61 aacaatatta tcaacacatg ggtttgcatc ttgctcagag aaaagtttta ccatctccat
      121 taccagggaa ggagagaaaa gttctccaat ttgaggtatt atctaagacc agttggacaa
      181 catcttacta ataactgaga gtccacagct tattcttttg gcacagggag agtggtacaa
      241 ggttcctaat atccttcaag acgaccatta cttcaccaca gagacaaaag actgtgctct
      301 gtgtacgttt ttatgagaga gaggtgtgga tgtccaatca gatggaaagg cagagttacg
      361 tgcttgtgaa atgaattaca ctgacgtctg ttataaatct ttaacataac tcatgagatc
      421 aattaagatg ttcaagcagc tacaaaaagg atgattgagg caaatgttaa catcaggatg
      481 accatatggt aagggaacgc tagaactgcg tggacataaa acgcgagcca tcggagtgcc
      541 accactaacc gggcacgaaa cagcgagcac gtaagcggta agatactgag aaaaatacca
      601 gaaagagaga caaatagcat gggaaccgag gcatacacag gattcaataa tacaagactc
      661 agagaagcgt aaggtgcttt attcctacaa gtcacaggtg cgaggttttg gcgtgctgag
      721 gggttgatat tcaccagcca cgggtcaggg ctgaggatag cccagcccca gcatgccgca
      781 cagaaaacac acccaaacct ttaatataat tatattttac gtgagacgat cagctgtaaa
      841 cagcagtgat tttatctttc tcctgacctg cagggatgga acaaat
//
LOCUS       KCKM01002925            1121 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45869apa ultra-conserved element locus
            uce-7688, sequence.
ACCESSION   KCKM01002925
VERSION     KCKM01002925.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1121)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1121)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1121
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45869apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1121
                     /note="ultra-conserved element locus uce-7688"
BASE COUNT          366 a          196 c          202 g          357 t
ORIGIN      
        1 gtaaaatatt catatgcagt attgactata ttttcttctt cccagatgca cttttaaaaa
       61 cttacctaca ttatgataat agtaaaataa atattatgtt cctaaaataa ctcttcaact
      121 gcagaacaga tagcaaaccc attcttcttg cagtgagcaa cagtgtactt tccagcaacc
      181 gccaaacact acgaaaatgg tttcatttac ttccagaatt tgccaaaaac agatgatgac
      241 tgaaactggt aatgactatt ttctattctc tatccctaag taattgacca ttaattataa
      301 tatcaatagg ctgtggataa gtaaagcaga cacatgttag ggctacattt catttgtaac
      361 tgttttgtat atatcataaa tctctaatat tgggctattg tcacacatga tgaattattg
      421 taagcatgtc agcacatagt ggaagtcaag tacattcaaa tactactcag tcagaattga
      481 atttggcatg atagtctcat aaaaggggac tcaattgaga gtttccactt gcctgctcta
      541 aacttgtcac ttgtaggtgc taaagagctt gttgtgttgg tttaattagt caacaaatcg
      601 gtccttactt gattgcgtgg tcgtatcaca tatgttaaca cttcactgtt tgatggagat
      661 attaacaagt gacaagagtc tcttggtcta tggactttaa agaagagaag ctcttctata
      721 ttatttcatt tggtcctgcc aatatttatt agatcatgca ggctgcaggc tgccagcaag
      781 agaaagacaa cacaaacatt tttcagggtt atgctcatct gtatcccaaa gaagggtcac
      841 taaacaatcg atggtagaag aatataagta agatgagtgt tttctaccac agcttagaaa
      901 ttcattattt gatacagttt gctgcagacc tccttggagc ttttttcact taaagataat
      961 ttatgacaag aacagagagg ttcttgaaaa tgctatagca actggagctg aatgatgcca
     1021 ctctggcact agatgcatag tcaccagagg ccagtaaaaa ggaagtttgc atttgtatga
     1081 agaaccgtat tagttaagca ttcatcagtg ttgtataaaa t
//
LOCUS       KCKM01002926             705 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45885apa ultra-conserved element locus
            uce-2206, sequence.
ACCESSION   KCKM01002926
VERSION     KCKM01002926.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 705)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 705)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45885apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>705
                     /note="ultra-conserved element locus uce-2206"
BASE COUNT          226 a          153 c          124 g          202 t
ORIGIN      
        1 aaaggggatc taagagttgg catttattta ccaagtgctc cacaatgggc attcgaatat
       61 tctagtggga aatacaaacc agcttccatc gtaataatta gatccactta ctagaaatga
      121 aacgacagtt tccttatgca caggagttgg tcagttttcc catttaggct cccacatttc
      181 agctttcacc cattccctag catggatgtt tcactgatgg ctgagggtaa cacttcagaa
      241 atgaactagc taaacaaact tcccagcagc acttgacaga gctacaccta ttcttcccca
      301 tttccaaagc agtacagaat taattaccag ttctatggat ctattgtaag tataatagac
      361 taaagagcta tcacagacac atttattgta aaagcacaat cccaagagtg tctagtagag
      421 ggccaaaacg attaacacaa atgctttgtc agatcaaaga taaaacctgc accgcccaat
      481 tgaggaatga attagaacag tgggttatct ttcaaattaa ccagggcagt tagtgaggaa
      541 aatttcatga aagtgtaatt cttagccttt gtgaatccac acagcaggca ttctgccagc
      601 tgacaagatg atgaaatttt catgcttaaa aaagccctct tcatttccca atttagatta
      661 gctagcattt ctctctcttt tcatctattt gctctcctga agcag
//
LOCUS       KCKM01002927             934 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45901apa ultra-conserved element locus
            uce-5966, sequence.
ACCESSION   KCKM01002927
VERSION     KCKM01002927.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 934)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 934)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..934
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45901apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>934
                     /note="ultra-conserved element locus uce-5966"
BASE COUNT          250 a          186 c          255 g          243 t
ORIGIN      
        1 ttaagagacc caggtgattc agcaagtctc aacaatgtct gcaatttaaa gtaattatct
       61 gaactttaag agttttaaag gttatcccca tcgctagcgg tacaatatgc tcgacgtgac
      121 tggcaacttc tgggagggcg ccgtttttgc tctgctgact ctcggctacc gttttgttcg
      181 cgcgctgctc tgtattcttg acggcaaatt gattgaactt gcaggaggaa gtgtgtgtgt
      241 gagcgcgcgt gtgtgtgtgt aagagcgagc gcgcagggga gagaaaggaa cgcgcctgtg
      301 tgaagcgtac cagggagcaa ggcgaggata ctgaatggca acatttaggc attgactgtg
      361 acattgtatt aaccttttta atggatgtat gtaataaagt gacatgtaaa tggagcacaa
      421 ggggagatat gacactatat ctggaaaagg ataaaacagt cagtgaatac tgggctatta
      481 tagcagtttg caaaccttgg ataaactcag tcagcggttg tataattggt tattcaatcc
      541 cgacccttgt tcacagctca aagccaggaa cactgagacc tgttgccaat ttgagtgaat
      601 gcagtgactg tactcggccg gggcctaaca ctggagccag gccttttcct gtgggctggt
      661 ttccaccatg tctgggactg gcgcggtgac agtagccctt ttgttgtgaa aggctggctg
      721 gtactcccct cctttgcaaa atgtctaaca gctacacaaa tataagaaaa taggaaaagg
      781 gacttactgt agcttttctc ttaccgactt agacataggg gcttcgggaa ggaggcaaag
      841 tccgtgcaat aaggaaaact caagcgtgtt gtgaaatgtt gcgggcagat aaggaaagcg
      901 ccatgttctc ccaatgtctg agacgaaccg tggg
//
LOCUS       KCKM01002928             641 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45916apa ultra-conserved element locus
            uce-4024, sequence.
ACCESSION   KCKM01002928
VERSION     KCKM01002928.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 641)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 641)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..641
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45916apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>641
                     /note="ultra-conserved element locus uce-4024"
BASE COUNT          148 a          126 c          130 g          237 t
ORIGIN      
        1 cctcgctttt tgatcctgga ttggctaacc acgaattcag ccttgttgga agcacaagct
       61 tgaagaaggt tcttcgtgtg tgtgttcttg ttgttcttta catactttgt tttgtggtcc
      121 ttgttactga cggctgcttt tgtttgtttt tttttctttt tttttccttt gtctgtttga
      181 ctttccccaa tatggtgtat gtgttgctac cagtttctat tgctccaccc cctcccccta
      241 tgcctcagtt gactccacag atacctctca caggcttcgt ggccagggtg caggaaaaca
      301 gtaagtttgg aaaagctgag ctgttgaagg gtagagccta ctttcttcta gcatgcatgg
      361 ctggcaagtc agactctatt ttatttcctt ttccagaagc taataccatc ttgcattcta
      421 gtgtcaatat gctattggag ctgaagggca cactcttcaa tagcttataa tgtgcatgat
      481 tattactgac ctgtttaagt tctgaactgc aaattattgt agaaatacag cgtgaaatat
      541 gtggcatatg cttggtgtga aagcagaaat gtatcttaat taaaaataat aatttcatgt
      601 tgaatcccat ctgaggcttt ttcactaggg ataattgatt a
//
LOCUS       KCKM01002929             531 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45931apa ultra-conserved element locus
            uce-2000, sequence.
ACCESSION   KCKM01002929
VERSION     KCKM01002929.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 531)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 531)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45931apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>531
                     /note="ultra-conserved element locus uce-2000"
BASE COUNT          158 a          101 c          119 g          153 t
ORIGIN      
        1 gaagagcaaa ataacgaaac tctagaaaag caaaaccgga tttcttctgg aaagtgcaga
       61 attctttagt tctttggttc cagagagagc gtgaagatgc ttgtgccagg cggcaccgga
      121 gtttgccaat tgatccttct tattctgtgt gtacatgcga agtttggatc atgttacatg
      181 aatagtgcca gctgggggtt ctttgccagc accatgccaa gtgaaataat atatttactc
      241 tctctatatt ttacaccagt gtgtgcctgc agcagcctcc acagccacta taggtttgtt
      301 ttatttttgt ttggggtgag gagcagggat gagggaggag agcaggtttc aaatccttat
      361 ttgcagcaca gtttgtttag ctagaggaat acaaaaaaca agtccaaaga gcctgtgggc
      421 ttttcctgtt tctaaactct cagtactatt aaaccaaaaa accagaaata taaattatca
      481 aatcccagtg cccagaaggg acgagtctat caaataagca gtatttacta t
//
LOCUS       KCKM01002930            1084 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45947apa ultra-conserved element locus
            uce-16, sequence.
ACCESSION   KCKM01002930
VERSION     KCKM01002930.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1084)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1084)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1084
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45947apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1084
                     /note="ultra-conserved element locus uce-16"
BASE COUNT          359 a          219 c          211 g          295 t
ORIGIN      
        1 tgaagtgtta tgcacaaagg ttgttaaaag catagtgaat taattaaatg gcaacataaa
       61 taaatgtgat ttccaattct ttcacatcct ttaccctaca ctcaacttta aaacacctag
      121 caaaaggcaa aatgcccact tcagtcatcc ctgctgctga tcattaattg cttcagaaaa
      181 agacaatatt ctatccatcc tctttggagt ttgatatgaa tggtgaagca aaagagagtg
      241 aaactgagtg aaacatgaaa agcttgattt gttaggaccc ctgctgtctg aaaagagatc
      301 aaagctcagg aggaggctgt aaaacagccg aatgcactgc acagaaacat ggcctgtggc
      361 agctgctctg ggcacgctct cacaacacag gtgtacctcc aagtctgctc tgccagctga
      421 atcatgggag caggttacct cttctccttc ttcattattt caactgcagt cactgaggag
      481 atgtgggctc catccatcac aatgcacaaa ttcacagtgc gcagattcag cacaggccta
      541 attaaagctt ttcctttcat ttgtggagat aattagactt tcatctcacc aggaagcttc
      601 agaaagatct atttctttct tcaataaaag ctacatcaaa caaaagcaga ttttaatcgc
      661 cttttctttg gggcatgagt caataatgaa agatgtcatg ggtaacaaaa atcgtgtgca
      721 gggggaaaaa aggagggaaa agagcccaag ctatgttctt taattaacat catgtttgca
      781 aacaccatta atttctctca ttaaaatgat ttttatctac aactgattgt tgataaaaca
      841 atcgatttga acatctcatc tgtttcaccg ctatccagga atccatctgc tgtgctgtaa
      901 agcaggaatc atgcagactg ttaagcaaca tgtgagaaca ataaaaaatg catatgtgtg
      961 tgtcagggat ttgtgagact cactgcaggg caagggccac cttttctcag aacatgtata
     1021 aaatatgaat tggtagcagg ccaaaggaca aaatgtcaca aagatcagaa gtgcataaat
     1081 aaca
//
LOCUS       KCKM01002931             871 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45963apa ultra-conserved element locus
            uce-556, sequence.
ACCESSION   KCKM01002931
VERSION     KCKM01002931.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 871)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 871)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..871
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45963apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>871
                     /note="ultra-conserved element locus uce-556"
BASE COUNT          290 a          167 c          147 g          267 t
ORIGIN      
        1 acttttttag catctgaaaa caatcaaggc acaaagctgc aaaatgttta gacattaatt
       61 gttaagagac agcattttat tccaggctag aggtttgagt cctcgactgc taagcattct
      121 ggtacggaaa tgatttatgg ccttgtagca ataacgatgc agcagagcca ttaacatatt
      181 ggcagaccct aggatggatt atcgacattg attatttcat ggaccactga tacccatttg
      241 ttaagagaag ctcgaagatg gcctctccct gactgaaatc ttttacgagc agacagcatt
      301 ttaagtatta ggaacctggg atttgggcca ttttttttct tcctcccccc aatctacctc
      361 tgtctcctct cagactctaa caaaaagtgt caaaaattaa agttcattct tcactatggt
      421 cttaatttct caactcatca taaccatgtc ttctttaaaa attaatgatt gccagcattt
      481 agccactggt tgttgctatg aagatctatg caaaaagcaa ggatccctat agagtgcatg
      541 atatatggaa ttctctttat tactacaata aaacttactg acatttcaat acttctgcaa
      601 atagcattat agtatcaatc ttctgaatta cgttgaaaat taagttgtaa attaaaagaa
      661 agtgtacttt ggaatacaac atgatatgtc acctagaaaa agacctttgt gcataacaga
      721 gctgagcaga aaaactgaaa gataagccca ggtgcctcta aagtgcctat ttcatcataa
      781 aggatctagg ttatatttta caagaagaat acagtctgaa agccctgata tttcacctca
      841 ggagaacaga ttctgaatct ctttaaaaaa a
//
LOCUS       KCKM01002932             903 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45977apa ultra-conserved element locus
            uce-4840, sequence.
ACCESSION   KCKM01002932
VERSION     KCKM01002932.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 903)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 903)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..903
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45977apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>903
                     /note="ultra-conserved element locus uce-4840"
BASE COUNT          226 a          231 c          219 g          227 t
ORIGIN      
        1 tgcgcgggtg gtccccaccg agcggcacag cgctgtcgat gcgagccgta tggcagatgt
       61 tcctgaaacc gaggcagtgc tgatctcaaa cagagggggc tttttaagtg catctgaagt
      121 gctaatcaaa ttaatttaaa tcaaattttt aaattttttt ttttttttcc attttgtact
      181 gatagttctg ttttgacttg gtgcttagat tccacatctg gtcactgtga aatcccaagg
      241 aagctccttg tctgggtctc agtcactgca tgaacagcct gcaaagggac tggctgggtt
      301 tcaggaggct ctgacggtga cctctcaccg cactgagatg ccaaggcaga actcggaccc
      361 cacctcagaa aaccctcctc tgccccctcg cattgaaaag tttgaccgaa gttcttggtt
      421 acggcaggag gaagacattc caccaaaggt aacactatcg ctcctcactt tcagcacgtc
      481 acagaggcaa ccccagagct aagtcccccg ggacggtgct gccgtcagca cctccagcag
      541 aagcagagcg ggcaggagcc catccccatg gctccgtgac gggcactgac ctacctgggg
      601 gctgcgtttc ttgagcaaat tttgcacgag gtggtggaag cttttcttgg gtgcacgcac
      661 agtgctgcag aacagcgtcg ccctccagca aagaaagttc tcgagcccgg gtagaggcca
      721 aagtaaatta ataatctcct ttccttagga taaaaagcaa ccttctgttc aaatagaatt
      781 acaggaacat aaaattcgtc atactcaata agacgggtcc tttttagtcc ggtaccgtgc
      841 ctcgagttgc aatcaatatt tgatggaaga cttgtaaggg ctccagcagc tttatacatt
      901 cat
//
LOCUS       KCKM01002933             810 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 45992apa ultra-conserved element locus
            uce-6517, sequence.
ACCESSION   KCKM01002933
VERSION     KCKM01002933.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 810)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 810)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..810
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45992apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>810
                     /note="ultra-conserved element locus uce-6517"
BASE COUNT          261 a          153 c          165 g          231 t
ORIGIN      
        1 gcatgcaagt acattttcca cggaagctct tacattccac atctgacatt gaaactttta
       61 cgtttagtcg gtgaggagta gaacttcaaa tacatatatt caataggcat ataacaaggt
      121 tctatgctgc tcgttgccca aaagaaatgt ttgtggcata taaatgagct gatatttcga
      181 gccagttcca aacaacgtta acgatatgtt attgaaaaac atcccagaac gacattgtcc
      241 ttcatgcagt gccctttatg caggccagta gcaaaacaac taccagttaa gcttttaaca
      301 tacatgctca aattgtgctg gtttctgtta gatttggcta tcgatgcagc aggtcacaat
      361 gcaatttaga agcaattaaa aggtaatgaa tgtgctgaag tgaaacctct gcctgggagg
      421 ctttttctgt gtataaggaa aagcagatag attcatgtcc ttcagtaatt tctgctggcg
      481 aaatggcaaa gcaaaatgat gctgaaacgg gcctcagatg tctgaaggac aggctggttt
      541 tgcaaatgta agcactgctg aagtactgtg atatgccagc tgaaactcct acacataaaa
      601 tcaaagcaac ttcttaaact ggtaactttc caaggattct ctctccgtaa taaggctttg
      661 gggagaaaga aaactgacgc taccctttga gtaccacaga gtttggggga ctaatatcct
      721 ttaaacaagg tagaaattat ctgtagttaa tgctggtata tgtcaagcac tgattaaaac
      781 aactattaag ccacatatat tcagagttta
//
LOCUS       KCKM01002934             696 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46008apa ultra-conserved element locus
            uce-5589, sequence.
ACCESSION   KCKM01002934
VERSION     KCKM01002934.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 696)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 696)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..696
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46008apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>696
                     /note="ultra-conserved element locus uce-5589"
BASE COUNT          254 a          139 c          104 g          199 t
ORIGIN      
        1 aaaaaaaaag caaaaaataa gctattcaat ctgagcattc caaaactcaa acacatgcca
       61 ctctccacac aacttgtctc actcaagctt acaaattaaa agcccaggtt tttcattatc
      121 ctaaagacag aaaaaaaata aagagaagga agccacataa gaaagaaaaa cagaatgaca
      181 gtgatgtttt agtttacact agatatggca acacatacaa actgtcaaaa ctatggagtg
      241 aaaaaagctg ttatcaagca actgtcaaga gagtcctctg agatttggaa atcttgtgtt
      301 tattgtaact actgcacatt acacaaagaa agaaacatcc ctcttctcac cattgctgct
      361 aaatatcacg caagagaacc cagacttctc tctcactatt tagattaatt tttttccctg
      421 tgtaattccg tgcttgacag cactgggccc tttcttttta agcttttcta ttgtttggtc
      481 aaagttcaga gagaaacttg aggttatatc aagcattatt tcatttccaa gaactgtcaa
      541 cacccatttt atgttgttaa cttgttgtcc atcatttaag agtggaaact gttgacaaca
      601 aaatacagag gcggaatgtc tctcttaaaa cacatatgca gaaagagtga agataacaga
      661 aacagctatt ttactaccca tactaacaat tctttt
//
LOCUS       KCKM01002935            1009 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46022apa ultra-conserved element locus
            uce-2102, sequence.
ACCESSION   KCKM01002935
VERSION     KCKM01002935.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1009)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1009)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1009
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46022apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1009
                     /note="ultra-conserved element locus uce-2102"
BASE COUNT          360 a          186 c          155 g          308 t
ORIGIN      
        1 acaccagttc tgtgaataaa atagtcccaa atagattatt ttggatagac agcgtaccag
       61 aatattcaca tagataccaa cacatacaca gacaatatgc atacacaagc acatgttcat
      121 gtatgcacac atatatttgc cttacacaga gaagacacac aggtttggca aatcagactt
      181 agctacattg cagtccatta ttttaaaagt tactagctat ttgacagaac taatacttat
      241 gcaaggcgta gtagtggaaa ctgtcttcat ttctaagatt tcacacattc cctaattaat
      301 tcaaggggac ttacagtttt agataacatt cttcctttta tcacttgcca tctagcagtt
      361 ggtataatgt caacacttac atcttttttt ccaactgaaa tcatttttaa aacattttta
      421 tcctaaaatg ttcacctcga tttttcaaaa attatcttaa agataagaga tttctttcca
      481 tttcagtccc acaacaacga gaatgtcagc acagcttttt tgacagacaa attattgaat
      541 caaagaaaga atatgccatt aagcccacag gttaggaagt gtcaggaatg gtttaaagag
      601 ataccccatt tatcttcaaa acatgcacgg aatgtcacta atgtgtgttt atcatgtata
      661 atcagacaaa gaaaatatcg aaataaagta ctcccgcata caatagaagt ctccttccat
      721 ctctcaagat atcagtgcta ttcaaataga ataataatga tgaaacctcc tttcttgaaa
      781 atggaaatca agtgaaatgt agatagaaat gatttttttg tagttgatgt acatttctaa
      841 agtgcattaa caggaaatcc agaacttttt aggtcaatta tattgtcagt attgtcaatg
      901 ccactgaaat gaatacctaa gcagtgcata ttcttgctgg aacacggtta gagaagaaat
      961 cctgtattca gttactcaga gaagagaaac tgcaggcaca cacttaaag
//
LOCUS       KCKM01002936            1049 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46037apa ultra-conserved element locus
            uce-3622, sequence.
ACCESSION   KCKM01002936
VERSION     KCKM01002936.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1049)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1049)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1049
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46037apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1049
                     /note="ultra-conserved element locus uce-3622"
BASE COUNT          328 a          179 c          216 g          326 t
ORIGIN      
        1 attttcaaac tgaaaataaa ataatgtagg acaatgttgc atgaaattgc atctctggtg
       61 ctgcctccag taaaagccta tcatctaact tcacctctgt gcatctactc aggataatgc
      121 atttagaaat cagggatgtt ttgctttttt cagtctcaga agcaagtgac ctggattcac
      181 tgcaaacttg ttgactagat ttcttcattt ggaggatggg ttggtttgtc cataaaaatc
      241 tcctttgtca aatttaatag atggatagat ttctatggag ccttccatag aaaaatgtat
      301 agtccttaaa aaatacattt tttttcagag aggtatgaga ggggttttaa tctctaagaa
      361 accaaacaaa ttctaaactg aataagagag atagagagag aaggttgcct ttctgcaagc
      421 cgccagcttt cccaagtgtc tcatcctctc ccctctgtca tcctgaggca atgtgcctgc
      481 atttgtgtgt agatttatag tttattttta tctatggctt catctgtagg tagctattat
      541 agccgccttg cctggatatt gtttgggcct gatagatctg tctgtagttc atcaaagggg
      601 agctgagtgg ctaaaagcca ttgggtccag ctgaggatga aatacgagcc atcagccttg
      661 gtaatggctg taaaatttca taattacatg gcctttatta cattgcataa tgatcctgaa
      721 gcagtatgga acaattaatt aagattttca accgtggctc tttcagaaat taaaaggtgc
      781 tagtgactga gaaatgggga agtgtcttgt cctaaaagca ttagggatgc ttaagaagta
      841 cttcctgggt acataaaaaa aaaggaaaaa aaggaaggaa aagaggtgaa gaaaaaagac
      901 aagaaaaaga agatcaacta gtcgagcagc taatgtcaga gtaacgtttt ttttactgct
      961 aattcttaat gtcaaagctg gttctaaaac tcctgcaata gtaactgcca taaaactgtt
     1021 ccttttctgt tctgtaaaaa ttttcctgc
//
LOCUS       KCKM01002937            1080 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46051apa ultra-conserved element locus
            uce-3150, sequence.
ACCESSION   KCKM01002937
VERSION     KCKM01002937.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1080)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1080)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1080
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46051apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1080
                     /note="ultra-conserved element locus uce-3150"
BASE COUNT          294 a          235 c          244 g          307 t
ORIGIN      
        1 ggagttacat gctcgaacca gacgagattt agaaccagac ccagagtttg atccaatctg
       61 tgctttattc tattgcatct catcagacac agcgctgcca aatactgata gaaaagaaat
      121 cactggcgct atagtgattg atagagacag gacgctctca agccaaggtt cctatttctt
      181 ttttcttaat gtattttaca aaaatgctta ttccgtagta atcaaacagt agcaagcaaa
      241 atataatcga gtatctatat tactatttag ctcatttaat tttgtcttgt tgactgttgg
      301 atgaatggcc atattaaacg tagagagagt tttcctgctt atatcttcct aagaactatt
      361 gcatgggctg gaaaccacaa atatcataac acacgtgcaa gatttcttgt ttgcgtactt
      421 gtggacaagc tcctgcagtg ttctaaaagt ataaagagga aaacctgcct gtagtttcct
      481 actcgagttt ctggatagct gcaagtagaa aatgttaaaa tcaggacagt atgttttata
      541 ttttacttaa gggttatttt tgtggtttta tctgatcctt ttaggatcta aacaggggcc
      601 cttattctat tgtacctttt tggctttgtt tagaccagtg atactcaacc tgtggctcta
      661 gagccggatg tggctcttca tggccctaca ggcggctctc gcaatgtagg cgtctgatcg
      721 gcgctccact ctatcaggca gcgcggggag cactgagcaa atggaccagc agtgtgggag
      781 tcgctgaagt tccccctccc atagggggaa agaaaaggag ctgctgggat ccccccacag
      841 gtaagagtag agatcacctc ccacccagca gccatggggc agaacgggat aaaactcgcc
      901 ctttcgcccc ttccacccct ccaccccacc ccttcctagc agccagaagg ggctgaagac
      961 aagttgctgc tgggagagag gatgctgatg tgtcatgtcg tgatgtatca atatgtgatg
     1021 atgttgacgt catcatcaca cattgaagtg tcatgatgga aagaaagtca cactgttgat
//
LOCUS       KCKM01002938             224 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46067apa ultra-conserved element locus
            uce-1758, sequence.
ACCESSION   KCKM01002938
VERSION     KCKM01002938.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 224)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 224)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46067apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>224
                     /note="ultra-conserved element locus uce-1758"
BASE COUNT           87 a           28 c           34 g           75 t
ORIGIN      
        1 gtcaaactgg acatactgaa tctatttaaa ctaaagcatg ccatttttta tctacagtga
       61 tctttaattc acataaaagg gtcaagaaaa tgtgattaag tgacagtttt aaaatgtact
      121 ataatattaa atagcttgat taagtgacaa ctataaaatg taatacaata ttaagtatct
      181 ggctatgtcc caaaagaact ttaaagtatt ttgaacgatt tggg
//
LOCUS       KCKM01002939            1081 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46082apa ultra-conserved element locus
            uce-5536, sequence.
ACCESSION   KCKM01002939
VERSION     KCKM01002939.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1081)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1081)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1081
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46082apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1081
                     /note="ultra-conserved element locus uce-5536"
BASE COUNT          302 a          194 c          226 g          359 t
ORIGIN      
        1 tagtttgtcc atccttctgc ttgaaggagt gttgtatcta cttctcaaag tgtctatttg
       61 gtaattagga ccttactgca aagaagaaca agaatatctc atttttctgc tagattctac
      121 tttgaagcaa gacaaaatac cagaaggatt aaaagtgctc agattccata ttagtgccct
      181 tccacggaag ttgcctatgg accacctctt ccagaaaaat cattttggtg gtggtgtgta
      241 gtttttctcc cacaaggtag accaaaggtg tttaatgttt atttagtcat tctcaaatgt
      301 ctatacatgt tgcctttgtt gtttgtttgc ttcatagatc tatttgcgat tcttggacta
      361 tgagatgcag aattccaatg aatgcaaaag gaattttgtg gctgtctatg atggaagtag
      421 ctctgtggag gatttgaaag cgaagttttg cagcactgtg gctaatgatg tgatgctgcg
      481 gacaggtctc ggtgtaatcc gcatgtgggc agatgaaggc agtcgaagca gccgattcca
      541 gatgctcttc acatctttcc aagaacgtaa gacccaaatc aatgtgtcca cctttcagtt
      601 tgttaaatga tacaaaaact gctaatcttt tcctcatgta gagtagtcac tgaaagatgt
      661 tcccaaacaa gctgtgtaaa tattcagaac agtttctatt ccaagcattt gtagtgtgca
      721 ataatctgtc acacagtaga taatgcacag gatttggaga caagaagaca gatgcgaata
      781 gtcatgactt gtccagttgt atgactgtga cttttatctg atccccaagc tgccaggctg
      841 ctatgtctca gttttccttt acataacatg gaagatgata cagctctgaa ggtttttgcc
      901 gagcttgatc cttttccatg aatttgattt tttagatctc attatgatgg gcatttgaaa
      961 aataccttac gattatttta gcacagatgg tgggtatgtt tgtgcatatt ccagaatgca
     1021 tttatcaata ggcatatatg tcagatcttg ttaagcaaag aactcagttc attttttgta
     1081 g
//
LOCUS       KCKM01002940             818 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46097apa ultra-conserved element locus
            uce-838, sequence.
ACCESSION   KCKM01002940
VERSION     KCKM01002940.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 818)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 818)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..818
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46097apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>818
                     /note="ultra-conserved element locus uce-838"
BASE COUNT          211 a          183 c          152 g          272 t
ORIGIN      
        1 tttagggtca ggggaagaga ggagttaata atattttttc tctccaaaat gtgtgcaata
       61 tgacaatact agctttatct ccagtaggtg ttcctctctg cccccacagc ctacatttgt
      121 gtgtctctgt gtctcaggca ctaagttcct ctctcactac aataacagga tttcatgcat
      181 atatactgaa gtttgaagag gatctctcat tgcagcctct ataaacttac actattcctg
      241 gcaggaactt ttgaagctaa tcagtcagca gccccagcca gggcttttca ctatttgctc
      301 agcagttcat agttgtgttg gcttcatagt ctttcccatt gtaccatctc tgttccactg
      361 cctagccaac aggctctgga cagcaggaca gctagatcca ataaatctga gacctgtcta
      421 ggtgcttcat ttatcaagag gcctaattta cccaggccct ttagactaat tgcagatttg
      481 caaaaaatgc tgataatgta gaacagtgca ttgtgaatgt cccttgccat atttctgcta
      541 atgtgtttca tctggagtac ataaagagac agggatgctg attttagaca cagcactttg
      601 gggctaatcc agttaaatga ttatccctaa aaatctgcag tgatgtcatt ttccctatag
      661 aactctgccc attgccttgc ttgctttatt gtgagaaata catgaatctg ggctttagaa
      721 gttcaccctg tattcttctt ttaatgcact gtaactctct cgtctgactc ttccagttac
      781 ccatttattc ttgtttataa tagtcttgtt gatagcaa
//
LOCUS       KCKM01002941             796 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46113apa ultra-conserved element locus
            uce-1677, sequence.
ACCESSION   KCKM01002941
VERSION     KCKM01002941.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 796)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 796)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..796
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46113apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>796
                     /note="ultra-conserved element locus uce-1677"
BASE COUNT          254 a          133 c          150 g          259 t
ORIGIN      
        1 aaagactatc atataaaagt tacccttggt caacacggga tgtgagtaaa gataattctg
       61 ccacttcaaa ggctccttga aatgatcaag tcaagattag aaaaaccacc aacaacttta
      121 acctttgtca taatttggtc ttgcttctga aagtacctaa tatttcctgg ccatccctcc
      181 tatgttattt aaatgctggt aatcttgttc atggcaattt caataagcca cagcagacgt
      241 acaatgcttc ctcttttaat aggtgcaaag tgagttattg tcacaaagca tatatatgaa
      301 aaaaggatgt gaaaagagaa tcttgcttaa tctctgtaat aagggcttgt gagggtgcta
      361 acatggtcac ctgaattatg catgtctatt gtgttcaaat atcataaatc gatgcatgaa
      421 taccctccaa atcattttca gttcatgaac atttatatac agagctcttg agcactgcaa
      481 agacaattag tcatatttgt atgccggaat taattgagag tgagatgcgg gaggcagaaa
      541 gagagaacaa agaatgcttt ttgtcagttc ttccaactga cagggataat tagatatatg
      601 aaattgaaat tcctcagcag ggggtttctg ttgacaatga attttctttt gattccattc
      661 tgttattctt ttatgctgtc atctgtggca atttgttatt cagcttgaag cttaaaaaag
      721 caaagcattc cgcttttatg agtagatgat gtcagtttgt acactgctgg gaaatagata
      781 ttaaatgtaa tcttta
//
LOCUS       KCKM01002942             928 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46128apa ultra-conserved element locus
            uce-735, sequence.
ACCESSION   KCKM01002942
VERSION     KCKM01002942.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 928)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 928)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..928
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46128apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>928
                     /note="ultra-conserved element locus uce-735"
BASE COUNT          323 a          166 c          152 g          287 t
ORIGIN      
        1 atggtattgg ttgcaattat tgtttttcaa tttacctacc accaaattaa gcaatgctgt
       61 ttttaaagtc ttaaaggaca actaaaccaa agcagaaatc tctttcatta tgcagtaagt
      121 ttttacagtg gtaacattta caatccctat aaagaaacca aatttttaag aaaacatgta
      181 acacattcag tggaaaaaca tgcacttgct ctttttcccc caaacattct tgagaagtaa
      241 ttttaagaag tggaagtatt tgcttcaaac ataatccata acaagggatt agatgtcctt
      301 aaagacagtt ggttgttgct tggaatgcat aataatgttt aatgaagtaa agtttaaaaa
      361 cctgttgcca tgagccaaaa atactggatg tgaaagccaa tgatttaggg gagacagggg
      421 aagaagtgat ttgttcccct gatctgcgtc ttcgacgccc agtacccaca ccactggtgt
      481 aatgcagcca ggtaccaata cactctgggc tagacacact cagggggctc tcttcctgga
      541 agtgagaaag ggggcaaaaa acagcaaagc atgcaaagtt agattcaaca gagccaaatg
      601 aacagaaaag aaaaaaaccc caatctgctt gcaccctttt atatactgct tttaaaacta
      661 ttaaacagcg aatagggata ttacagtatt tggaagttat ttttcatcca attatatctt
      721 ttaatacaac acttcaaaca aatttctggt agacttaatt attagataca agagaaaata
      781 attgttacca ataaccaatt cataacttta aggttctacc atgttggaaa taaagtatct
      841 gttatccttg acatactgtt taatagttta gcccttttat gtacattaaa cttccctatt
      901 tattacttaa tatttttcat ttctagtc
//
LOCUS       KCKM01002943             797 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46143apa ultra-conserved element locus
            uce-6076, sequence.
ACCESSION   KCKM01002943
VERSION     KCKM01002943.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 797)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 797)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..797
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46143apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>797
                     /note="ultra-conserved element locus uce-6076"
BASE COUNT          263 a          138 c          135 g          261 t
ORIGIN      
        1 cagagagtga ggataacagt tgacctgtgt actgggagag ttatttctag aaaacctgag
       61 ttcatttctg tcttgccaaa cagctcctag aagtgcaaga tcctcacttt cactaattta
      121 aactaaaaaa tcatgaagac caggttcatg gagagagaga tatcatagag ccactatcca
      181 ctcaccattc ttctccaagt atggaaaaat cagtacaaat gcttttgttg tatagaagtg
      241 gtcacagaaa attgcaaata ttcccccaat tcctcctgct gacaatctgt gtagaatttg
      301 ctctatttga attcatacac agtacttctc taaagtagca aagatttatc caactatttt
      361 gtgtttaaat atggagctga aaagcctaat cgcaatttaa tttgactaaa tacttacata
      421 ctttatggtc aatcatccaa atcttttaca aggtcccttg gcttcggaat tactaatcta
      481 aaatggtact atatatgagc cttgtctaac atgacatata ttgaaacaga ctgtggaacg
      541 atcatttaga gatgagaacc ttgctacagt tttagtgaac caaagctaag aggcaaatta
      601 ttcaattata gtaaatttac agtagcttaa tatttgatag aagtggttct tctatcatca
      661 gagcatcata ccaaaaaccc ttgagtagta aaatagttcc ggaaatgctg aggatgttgt
      721 agttacttat taagaaaatt tctttatctt gattttttat gaacagcttc agtctttgta
      781 cagtaatttt tggtttg
//
LOCUS       KCKM01002944            1160 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46158apa ultra-conserved element locus
            uce-146, sequence.
ACCESSION   KCKM01002944
VERSION     KCKM01002944.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1160)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1160)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1160
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46158apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1160
                     /note="ultra-conserved element locus uce-146"
BASE COUNT          370 a          218 c          254 g          318 t
ORIGIN      
        1 taattcagat gtaaactttt gtagttctcc ctgtataaac acacattcca ttttctagtg
       61 gcataaacaa tgactgtatg gcctttatat atgggaaata aagacggtgt atcgatcgct
      121 aattcataga gagaaaaagg ttagaaggaa cagcgcccta cacccggagt gtcattgcaa
      181 acactgatgc cagaaaggtc ctcagaagca gggattcatg caaagggaat tctttttaat
      241 gaagcttgat ttaatcccgt tattctaata aagtgtattc aattgacgca gaaaatctga
      301 aggtctagtt cagctgctga ttagagcttg gttgttttga agacagtgga tacaatgaga
      361 gagaagtaag ttaataagct tttggtctgc taatccacac ttcctggcga gagtttgagt
      421 tctgaaggag ggcaatttgg aagctgtctt agcataaatc taaagcaagc ctgtggctgt
      481 ccagggggag caagcccctc agcattcacc aagacacgct tcaaggagat tctactctta
      541 atccaattta ctcagccgaa taagtcccac tgcttcagct tgccaacaaa ttaaaatcca
      601 gcttcataaa aacaccttga atttggaagg tattggctgg cctgctagac ttgaaacttc
      661 atttattctg gctaacttct caattatctt cccagcagtg gagatgtgta aaagtgcaaa
      721 aatcaatagg attctattcc ctttctattg gaaagggaaa aattaatgag ataggacact
      781 ctcttaatca gaaataaatg ttttaattca gataatgaca tagttttccc tcgctgaagg
      841 atgacaaatg ctgggctgca cccccagcag aagcagtttc aattttattg taaatataaa
      901 aggtattgat cggcgagatg cacaaaccct attgcttaca aaagccattc agggggactg
      961 ggaaaactat taagcactgg gtcagaaatc aataaacaac actgaaatgt agcagaggtc
     1021 gccctaaggc ttcgtggcat cttagaaagc caagtggcag aaatagtgac agaaatgtct
     1081 cttgtggagc aatgttaggg atgaaggggt catgcgttta atctcttcag agctttgaca
     1141 ggtccgtgga acaggactaa
//
LOCUS       KCKM01002945             868 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46172apa ultra-conserved element locus
            uce-2007, sequence.
ACCESSION   KCKM01002945
VERSION     KCKM01002945.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 868)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 868)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..868
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46172apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>868
                     /note="ultra-conserved element locus uce-2007"
BASE COUNT          272 a          161 c          144 g          291 t
ORIGIN      
        1 tcttcggaaa tggatatgac tcatctatga cccaaattgc aaaattaagc accgatcaga
       61 tgaagcagat ttaaaaaaag tttcttattt caccaaatgt gtcagaacca tttggtttgt
      121 ttcttaatat acgcattttg aaagctacca gggagagcat attgggcagg ttaaaacctg
      181 tcttcaaact tctggcttaa attggtatca ctttgttcaa gaaagagtta agtctaacaa
      241 gcagaaaaaa gaaattaact aaagtaaggc ccttgtgata caatgacact tgctctatgc
      301 tcttacagag aaaaacacga tgataaaaca ccacaaagag gagtgttatg aattttatta
      361 atgactagaa gacagtgtgc aaaacatcaa aggtctgtgg aaaagattaa tgaccccgtg
      421 tgagactgtt taattacctc cagctaatta gattcttgac caaattttta atatctgcat
      481 tccttctaaa gcctaattga gattccacat tatttatcaa tctttcaaaa agcccttagt
      541 gtgctgcttt tttttttttt tttccctttg cactttgact ccatttatgg tcaattatta
      601 aataaatagc gaagtaaccg ttctctccaa actgtatatg tggaacactt tatgcctgtt
      661 tattttgact aggagactat cattggcatc ttttatacat aatgaagcac tctagctaat
      721 aaactgactg acttcactgt aaacaacgtc aataatattt ttgttatctg ggctgtgctc
      781 aggaactcct catgtggttt ctgtaaatta gcctttgcta ttgtcagtta atccttattt
      841 cagtttacct tggtccagtc ccagggcc
//
LOCUS       KCKM01002946            1040 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46187apa ultra-conserved element locus
            uce-5387, sequence.
ACCESSION   KCKM01002946
VERSION     KCKM01002946.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1040)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1040)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1040
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46187apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1040
                     /note="ultra-conserved element locus uce-5387"
BASE COUNT          312 a          198 c          201 g          329 t
ORIGIN      
        1 gtttaggggt cagaatttaa atacttgatc atttctgctc acttagtaaa ttggagaact
       61 agcactgata attttttaat agtatgtccc ctttaaaaat tagtaaataa aagcctggga
      121 aagtctgtgt tggtcatatc ttttttaaag aagttttttt ctgtaatgtt cagtgtagga
      181 aagttcattt attcttatct tttatgctaa aagaagtgaa cgagggagga gctctactga
      241 aatagagcag ctctgaggat tttgagagca gtaagaaaat gtaagtatca aaataattca
      301 gaaacagtat aaggcacagt ggcacattat caatttacaa catttaaatt gataaatgct
      361 tggtggtgaa ggcctacaag ggcactttga aaagcaaata gcgacctggt gaagaaattg
      421 atttttcccc cccgaaaatg actgcatgat gcatcatttg actgcatgct gtccaagtgc
      481 ttgacagaga taatctcagc aatcccacgg gtgaccttat cgttctcacc agggcaactt
      541 tgtctaggtt ctgactttgt gcatgtcaag gtttctgcag gcaggatcct tagggggaaa
      601 aagttcctct gttcgatcca gatattgaac cactcttcaa ggcgctcccc cacccctaaa
      661 aaggcgagct tgtttctttt cttcataatt atgaatgaac cgaacaagag aaaatatcta
      721 tagacacagt atctttgctg aagccgttat tgctttttca gtgtagctta gctcttaaag
      781 gagaaaggat acctgccatt agaggttatc aggcagagct gaaaggctcc aaaacatatg
      841 gcaggcttct acttaacaga aatactgtgc ctgcttgctt tctcacactc acttttcgca
      901 gttttacttt tgctcaggaa aagattttgc cgttgctgca atatttgaca tcagtgccta
      961 atactttatt tctttatgcc cttttttttt tttaaatccc tatcccaacc caaaaacttt
     1021 taagacaact caagtgcaaa
//
LOCUS       KCKM01002947             480 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46203apa ultra-conserved element locus
            uce-3053, sequence.
ACCESSION   KCKM01002947
VERSION     KCKM01002947.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 480)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 480)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46203apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>480
                     /note="ultra-conserved element locus uce-3053"
BASE COUNT          133 a          109 c           93 g          145 t
ORIGIN      
        1 gtggggggga acagttgaga tttttctagt gctttcttcc atgatgggat taagcaggac
       61 ctgctccttt aaaaagtgtc cccttcccca tcatcctccc tctttccaat tacagcacta
      121 atttcagtaa tggagaatta atggagtaat ggactgctga agctggcctg aaggaactgt
      181 agtgctcagc acaaattgag taaataaacc atatattaga tttctaaaca atacttttag
      241 tccagtcccc agggaaagag agttgtcaag acttacttaa gtcaacccag caaaacgtat
      301 gcaaaagatc cacccattca taccctggaa aatggcacca gtggcctgaa gcatcagtga
      361 atctctcaca taaatctctg ctgtcctgac agagagagct ttgtgttgtt tccttctcct
      421 gatttctcct ctttgattta tttaccaata agcagctttg tgcctgtttc tgttagcatc
//
LOCUS       KCKM01002948             491 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46232apa ultra-conserved element locus
            uce-3219, sequence.
ACCESSION   KCKM01002948
VERSION     KCKM01002948.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 491)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 491)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46232apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>491
                     /note="ultra-conserved element locus uce-3219"
BASE COUNT          164 a          106 c           89 g          132 t
ORIGIN      
        1 tctccttcac agaaaagata gcaggctgaa caggaacatg tcaaggctcc ccagttaaat
       61 caagttagcc tagaaaacag cagtagcagt tttctcttta acagcatgaa gcataagcag
      121 tctgcaaaat aaaaacttca cgagactgcc cccactaaac gattcctgtt agtcttagtt
      181 gttttgctta accactggta acaaagcaca catactaggg ttaaaaccaa ggctgcaatt
      241 aatgtttttc agaggaacag aacaatggac ctaatacctc aaatctctga ttgctgactt
      301 tctttccctt tttgttccag acaattttag gtcttggatc tcctgtggct tgacagatga
      361 acgaggcgac tcctccagaa acccctgtct ggtcaacagg agttcttgta aactttggtg
      421 gtgctgaaac aaacaaaaaa acaacattag tctacatatt aaacatgagt caagatttta
      481 aagtgaaaaa a
//
LOCUS       KCKM01002949             982 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46248apa ultra-conserved element locus
            uce-1336, sequence.
ACCESSION   KCKM01002949
VERSION     KCKM01002949.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 982)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 982)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..982
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46248apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>982
                     /note="ultra-conserved element locus uce-1336"
BASE COUNT          294 a          238 c          211 g          239 t
ORIGIN      
        1 tgcacagtta tatttacggg taatccccaa tcgcaaaatc cctcaccact gatttcgtca
       61 gacgacagca gcactttggc tgttcgcgat gaatctgatt cacctgcagt aattcaggcc
      121 attcagaaga atgggattta aaactaacat tcaaacaacg ttgaggagag caactaaaag
      181 gtgcccacaa gagacatttc tagatgcctg cgaaatatat ttacctaagc caacaggcac
      241 gttttatttg gcaattccac attttaaagc tattgcctca attaggccga aaaggaggat
      301 actgcttatg actgcaagtc cctgcctcgc attcatttat tgttcagttc acagtctctg
      361 aatacaacac aatcctccaa cggagtcagc tttcataatt cagcagtaca aagtctgcaa
      421 acacatgtaa cctagatcca tatttcacag tgacagcata tgatagcaga atgtgaagta
      481 ttaatgctag tgtcactaca gtcctacact ctactgcact ttaagagaaa gcagctgctg
      541 agatgaaatg tgtgccaact gtctgaagac agaaacataa gaaacattcc ttctgttaca
      601 aagggagaga cacacacaaa cagactttct tttagactca acaagctcaa agtttcttac
      661 tctcgccttc tacgtatcta gcttgaaccg gggtggaagc cccggctccc gcctggagga
      721 gctctgcgag cagagcaggg ctggggaagg cgaggtacca gcatgcgaaa ctgctgggat
      781 gaggacgtca aagcggtggc attctccaaa atcagttaca cgtacagaaa acaccaagta
      841 cctcctgaga taatgatggt aggagaagct ttaggacctc ccacgactac tcctgcagct
      901 tttccatggc aaaagcgggg aaattctctc ctgccagcaa acatcttccg gcctcgtgaa
      961 gcgtgtggtg ggtgcttgct ac
//
LOCUS       KCKM01002950             636 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46264apa ultra-conserved element locus
            uce-3318, sequence.
ACCESSION   KCKM01002950
VERSION     KCKM01002950.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 636)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 636)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46264apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>636
                     /note="ultra-conserved element locus uce-3318"
BASE COUNT          176 a          170 c          158 g          132 t
ORIGIN      
        1 aaacacaaaa acagcactaa gcggcctttc ctcctttccg ctccccttgg ccggtcgtct
       61 gccttgcgcc gagagggccc tcgacgcggc cctgctggga gcgcagcgcg ggggagagga
      121 ttagcctcgc taacatgcaa gcatttgcaa aagggaagga aaaaccccgc tactgtattt
      181 ggcgtatgaa taaccaaaat gcacgcgctg acaggagacc gggacgggcc cgcggctccc
      241 cgggagaaaa tgtagctgtg atgagtgaca gggctttcag gaaatatgtt cacaatcaca
      301 gacagtgaag gccatgacct agatcgttta agagcttgtc ttgtcaaatt atcaaaagct
      361 tcttcctctc tgaataaaga gtgacataag tgagtgtcag aaagctgcag gctgacaagc
      421 caagcataca ataacagcat gcacgtcaca tacttgccga acaccgccac ggctagcggc
      481 aaatcttaat gagagcgcgg ctggcccagg agacttgggt ccctgctggc acagctactc
      541 atctcgcaaa aatccttcag ctccaagtca gttatggtct gacacgacga ctacaattac
      601 taaacacaac tttttaacag aatcctctgg tgcttt
//
LOCUS       KCKM01002951            1168 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46280apa ultra-conserved element locus
            uce-6975, sequence.
ACCESSION   KCKM01002951
VERSION     KCKM01002951.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1168)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1168)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1168
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46280apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1168
                     /note="ultra-conserved element locus uce-6975"
BASE COUNT          275 a          297 c          216 g          380 t
ORIGIN      
        1 ataactcttg agcagtttgc ctgctttcga gagccatggc gcaacccatg tcaatgtgat
       61 cctctatgta ttaacatgga cggatataaa tttgtaatca gcaccctgga ttccctgcct
      121 ctcttccatc agaaatctca acgttgtttc acgctagttg tctccaaagc ttctgtttta
      181 aattgttgga tgcaatcatg tctaagcgag tgcacttccc gtcaaagtct tttgggagtt
      241 ttgccatttg cctcagatgg agagtactta gactaagaca gagatccttc taaacgatgc
      301 tgtgttcccc ctcagtgaag ttctaagacc tgaagaccct aaaacttcat gtcacccatt
      361 actgtaatgt atttattact ataaaatgaa ggagctggga catggaggtt tgtattttaa
      421 agctttgttt tggtcatacc acattctgcc aacatctaac atctgtattt gttttttgaa
      481 ctctccttaa tggattatat gcatctgttc agttccaaga ataatgcttg atttcctgaa
      541 tttataggtt gcaataaaat ccattcgtaa ggacaaaatt aaggatgaac aagatatggt
      601 tcacatcaga cgggagattg agatcatgtc atccctcagc caccctcata tcatcaccat
      661 atacgaaggt tagtgaatgt gattctcctc cctgactgct ctgttacatt cttgcagacc
      721 tgatgttcgt ctttcttgag atcatgcgcc aaacaaacct ctactcctac tgtaacccat
      781 cccttaccaa agagactgtt tttaagcact accttccctc agagccacca gtgtttcaca
      841 agtgtgtgag ttaagtgctg tgtccatggc aggtgggaaa gcatggatca cctcatctcc
      901 ttgctcccat tggacagttt ggtttaattt tgccctcgct tatgcaccag cctgatgtct
      961 gtttatgtcc ccagcccctt taccagtctt tgtgtgcttt atttcccctg gactgcacaa
     1021 gaccagtctt atctgctctg cacctttggt ccccccttac ctgccaggtc gtcgtgccgt
     1081 cattgctgct tttccccctg aatcccagca tccacttcct gtccacctct gcatgctttc
     1141 ctgcctgtct agttgctggc ttatcatt
//
LOCUS       KCKM01002952             936 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46296apa ultra-conserved element locus
            uce-2578, sequence.
ACCESSION   KCKM01002952
VERSION     KCKM01002952.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 936)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 936)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..936
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46296apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>936
                     /note="ultra-conserved element locus uce-2578"
BASE COUNT          294 a          211 c          164 g          267 t
ORIGIN      
        1 ccctgaaagc actacaccaa caggctaatt agtgttgctg atatacaccc atcaagtttc
       61 ctttcaataa atgttctgtg tacagtagct ctgaataata tatttatttc accgacagaa
      121 caaagaacgt taggcatgtg aacatgacta cacattagtt tttccaacca attcctcttc
      181 agctttgaat gcttggccaa tttggaagga gaaaggcaga acagcccaca tttacacaca
      241 catgctaacg tgtattttgt aaacattctg aaacaaaaat aaccatggaa tgcaccattt
      301 accttccttt cctgcaaata acatttatat aatttagaaa gcaattcaaa ctaagtttaa
      361 gcaaaagcct ttttggatgc actttgtaaa gccattatgg catataaagg gttagtgctc
      421 aaaactaatt gggatttttt tttttcccct agcaaatttg gaaatgaact gaagctgctc
      481 cctggtgtga aagctgaatc cagcagccac ctgcaggatc agcgaccagt gctgccagat
      541 gctacaaagc ctttgatttc cagtagcgat ttcagacaca tttaactcat gtgacatgaa
      601 ctaactggaa tagcatattc aatcacttcc cacctttaaa aaaaaataca gactctggct
      661 tttctgcttt ctatatatga aacagctgca gcagatagac tcattcagac tcacagcttg
      721 ggccctggtt tccttaatga cttccatgat ggcatccatg ttgaggtagc ttttgctggt
      781 gggagctggg ccaacacaga cagcttcgtc cgccattttc acgtgaacct gaagaggaaa
      841 tgctccacat taacagatgc tcccagcaaa aataattacc atcaccctga aatacgcaca
      901 caaatctgat ttgtttcgaa gtcgatttac atagcg
//
LOCUS       KCKM01002953             915 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46312apa ultra-conserved element locus
            uce-3320, sequence.
ACCESSION   KCKM01002953
VERSION     KCKM01002953.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 915)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 915)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..915
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46312apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>915
                     /note="ultra-conserved element locus uce-3320"
BASE COUNT          269 a          190 c          171 g          285 t
ORIGIN      
        1 caggggctca atgctgttgc aatcgactca gccccattaa agataatggt gtgagcattt
       61 ccgtgctgtc atcatgttac tatcaacagc attatcagta tcaactgctt ttacaattat
      121 gcacaatggc tcttcctgca caaagactta gcaaccacca aactcgtttt ctttttaaat
      181 acactgaaaa gagcgtagat ttcaatcctt catctgttca cagatgaaac aacatttcca
      241 aatcatcact gatagcattt ttttcctccc attctaagga tggccaactg ttctcagcga
      301 tttctattac atttcctacc tattatttca tgtaatggca ttccttaaat tttaaattag
      361 ctttgaagaa taaaaataat tgaattcctg ctgttttgtg tacatagagg gtgacaggag
      421 ctaatgtgat aatttaaact gtaaatgagt cttcactttg tgttcattaa ttacagctaa
      481 ttactgaatt acaaaccttc ttggttaggc actgttatgt attcatgtag catgttggat
      541 ttccagctgg tagaaaactg ttttatagac ttacaagctg acacaccaag ctactactga
      601 aacaattcag tatgaaaaat aaaggaaggg tggggggggc gtaactactc ttgctctttg
      661 aattgagaga tgagaaacag tgctgcaaac ctgaacctca ggtgagcgag gatctcacgt
      721 atatgactag aaaatatacg ctgtatctcg taggcacaaa ccaaatgatt ttgagctgcc
      781 tcttcgggtg aagagcgtaa gcctgctctg ctcacacctc tttcacacca gtgttagttc
      841 cctgatttcc atgttcctct ctttatagaa ggacatcaga gagatccaaa tgcttctgta
      901 aggggccagg gctcc
//
LOCUS       KCKM01002954             853 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46328apa ultra-conserved element locus
            uce-421, sequence.
ACCESSION   KCKM01002954
VERSION     KCKM01002954.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 853)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 853)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..853
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46328apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>853
                     /note="ultra-conserved element locus uce-421"
BASE COUNT          264 a          152 c          139 g          298 t
ORIGIN      
        1 atgtgtacat acataaaaag gtatgcatat atacaaacag tgtccttaca tatataagtt
       61 tttatatatt tacacacaca cacaaaaatc caagtgcacg cacagctatc tgaaagttaa
      121 ccagggtaca ttttcttatt tttcatggca gcacaagcct tttttgtctg ctaacccttc
      181 agtcactaat tcacattctt ttaaagggaa aaaaatatgc ttctgtgctc tagttttaaa
      241 atgcaaaggt atgatgttat ttgtcaccat gcccaaaaaa gtccttactc ggtaactttg
      301 ccagaagagg gagagagaga gaaggcaaat gctcccccag ctgtttcctg tctacagtgt
      361 ctgtgtaatg tagataaatg tgaggatttt ctctaaatcc ctcttctgtt tgctaaatct
      421 cactgtcact gctaaaatca gagcagatag agcctgcgca atggaataaa gtcctcaata
      481 ttgaaatgtg acattgctct caacatctca catctctctg gatttctttt ttctcatcat
      541 tactgctaac aaattcattt ccagactttg cacttttaag aagcaatgga aaaaatcaac
      601 agtctttcaa cacaattagt taagtgctgc ttttgtgatt tcttgaaggt aaatctttat
      661 tactatttca aataattttt tagtttcatt ttactgtgta ttgtctgctt ctggtttgaa
      721 gagtattgtg cactttttat tttagaactg agaattattt ataaattgct gaacatgcaa
      781 ttttatgtga tctggaaaat ggctgtatgt aatagttgca attacataga taactgtaag
      841 ggtaaactat tgc
//
LOCUS       KCKM01002955             285 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46343apa ultra-conserved element locus
            uce-5173, sequence.
ACCESSION   KCKM01002955
VERSION     KCKM01002955.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 285)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 285)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46343apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>285
                     /note="ultra-conserved element locus uce-5173"
BASE COUNT          111 a           48 c           39 g           87 t
ORIGIN      
        1 aaattttcac caaccctcac aggaataaac tattctcact tcaaacaatt gttacagttt
       61 gaatccaatt gactctagac aaaagtactg agataatcag catattaaag ccaacactat
      121 aaccatatgt taattatgta aatgattcat tttaatcagc tagaaccatg taaagagtta
      181 caaggaatgc aaatgtaggg agttattaaa aatctcatta ttattcatct tggttccatg
      241 cgtgaatgta tccatccaaa cagatgaatt aatagttaga tgaaa
//
LOCUS       KCKM01002956             807 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46357apa ultra-conserved element locus
            uce-5922, sequence.
ACCESSION   KCKM01002956
VERSION     KCKM01002956.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 807)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 807)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..807
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46357apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>807
                     /note="ultra-conserved element locus uce-5922"
BASE COUNT          280 a          142 c          133 g          252 t
ORIGIN      
        1 agaaatcgtc ataggaatca taagttggca gcgtacacac tatagttttt cctcttcctt
       61 ttcagagcag atcttaatct ggctgctaat gaaatacagg agattgattg caggaaacct
      121 gcaagggcat atttactgta ccatatatag taagccccat ttggtgcatt agcatttagt
      181 cattttatgc taattcagtg agaaaatgac tcatgtatat gatttcatac gcatcagtta
      241 taacttgtaa catccttata agaaggaaga aattaaaaat cattagaaaa ctaaactaga
      301 gtcgctacat ggttaaaaca ttattaaagc atatttcagt gttttgctta cactagtgtt
      361 ctcatcatgg tgccaccatt tcatgacaaa gagcatagag gagaaaacat tcaacttaaa
      421 atgtctgctg gcacacatcg ctggatttgt atgtcactaa acaatgaacg agtatagcct
      481 tgaataccaa ctatttaatt agcacttttg ccagccatgc atagaaaata gctcatttac
      541 atgcgtcatg cttagtgatt attcccatca aaaagctact gatgttaaat atatctagca
      601 ttctagtgtg ccaacacaag aaaatcaaaa catacgttat tattttagaa gccttgaaat
      661 ccaggagttt aattaaaaca tgtaaagtct ttatatttct cttggaggta tgttttaatt
      721 atttaattta accttatatg cgcataaaag gctggataca actggtaatt aagaacttca
      781 aagggcaaca gaaaccctct aacagtc
//
LOCUS       KCKM01002957             549 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46371apa ultra-conserved element locus
            uce-3736, sequence.
ACCESSION   KCKM01002957
VERSION     KCKM01002957.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 549)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 549)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46371apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>549
                     /note="ultra-conserved element locus uce-3736"
BASE COUNT          176 a          111 c          117 g          145 t
ORIGIN      
        1 gcacactgcc cctattcttt cggcctttgt agccatatgg caaatccatg tagacacagc
       61 caacatccat ttattcaggc acataatgtc ccgcaacagg gaacaattgg aactttgttt
      121 gcttctatta ttgatgcgaa tgggcgacag agagagaggg agagagagaa aaaaaatcat
      181 ttaactataa gagatatcca gctaattatg aaccatatgt gcctatagtt tcaaagcaat
      241 ccaatgaagt tcattttaaa tctagactac tttattagta cggaagacag atgtctcaac
      301 agtacatgca tcacaggaaa ccatgtaaag aagttcttga aatatttaac taggactcat
      361 tcattgtcag aggggcttta aagtgccctt tatcatgaga atgcataggc agaagcggac
      421 ggaggctgcc ggttgttacc accaacccgc ttacccctta gcgctaaaac ccagattcca
      481 ctttggattt gaggacagga atagttttgg aaagattcaa aatatcgggg gtcttgaagg
      541 accgacgtt
//
LOCUS       KCKM01002958             748 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46387apa ultra-conserved element locus
            uce-7559, sequence.
ACCESSION   KCKM01002958
VERSION     KCKM01002958.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 748)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 748)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..748
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46387apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>748
                     /note="ultra-conserved element locus uce-7559"
BASE COUNT          201 a          186 c          166 g          195 t
ORIGIN      
        1 gatgcgagtg tgatattctt tgaatacttc tgtctccagg aattctttat tttgccatag
       61 aagaaaaata ttttcatatt ctctcctgcc gttcagacct gcaacccagc gagccctttt
      121 gcccttgaga gccataacat tatttgttaa catttttatg atgccaaatg gtctgtgtta
      181 gaacgggtgc cattctttag ctgggaaacc atatggcatg ccgagtaata aataaggtat
      241 tgtgatagtt aatgaaccta attgctagca aaggctttaa tacagagaat gtgctgctga
      301 gaatttagca ccacattaga gatgcagcag agctcctctg acttctgagg cttaatttaa
      361 gttctatatt gcaaactcca gaaaataatt ccaaaccctc ctgctggaaa agcaacctgc
      421 tggtagactg tgattatact gaattactaa aatcgcaatc aattttatac actcagttaa
      481 cccttgctag ggaactcgtc gctaggggag tccgcaccga ggaggtgctg gggccgagcg
      541 agcggaagca tcgccatcgc cagtcccctc cccggcatct ccctctcctg ggatcaagcc
      601 cttttcccgg ctaccagccg agctgaccgt aggcagagca gggaataaaa gccatgattt
      661 tgaacggtca ccaccatccc actccgtgac taacttatca actgccgtcc tcgcgccgcg
      721 gcagccagaa ggggcagaaa gcgcaggt
//
LOCUS       KCKM01002959             840 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46403apa ultra-conserved element locus
            uce-6721, sequence.
ACCESSION   KCKM01002959
VERSION     KCKM01002959.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 840)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 840)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..840
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46403apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>840
                     /note="ultra-conserved element locus uce-6721"
BASE COUNT          213 a          192 c          214 g          221 t
ORIGIN      
        1 atgcaaaaga gtcctggcag gggagaacct tctcccaggg ccgagagcag ggcaggacga
       61 ggggcagagg gtgggagcga tccggccccg agtgtgccct tagcacgtgt gttcacgcac
      121 gccgtggcct ccgttggtcc tgaaaggagc tgtgactggg gataaaatgt cagggtagca
      181 gccagtggct ataaaatccg gggtctacac gaaagggaaa aagtgacaag gggaaaagcg
      241 aggtcggccc caccttgcag ggtctgctct ggaatgtgtt tgcactccag ggtgtgcagt
      301 gcctgggagt gcgttagcag cagtgttgag ttagtaatat gaaccctata caaatacctc
      361 cggggcagac aggtccgttt caggctgtgt ttatttaata aagagccagt gaagtaactg
      421 caatttcatt gtcaatttac taatgcgtta cagttatgtt tcttaacctc attgtttggg
      481 ctcaggagct cgcagtgcct ggccaaaact tttcctctcc cccttattcc tcccctgaag
      541 tgtaaaacac attttattat gactagaatg tcttctattt atcaaaaact gggattaaaa
      601 ccctcaactc cccccttcca cacataccca acttggcaac aggtcagttt attaacctcc
      661 taaaagcctc ctttttttct agtctttctt tttctaagag aagtgaaaac gcacacgttt
      721 gtgtgcacat tgacaccgcg ttttaaaagt tcatctggga agaaaacaat ggaaagtctg
      781 gttggaaaga gattgagcgt gtgtctttgt ggtctggtaa gtctgactac ggcctcctac
//
LOCUS       KCKM01002960             935 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46418apa ultra-conserved element locus
            uce-5917, sequence.
ACCESSION   KCKM01002960
VERSION     KCKM01002960.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 935)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 935)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..935
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46418apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>935
                     /note="ultra-conserved element locus uce-5917"
BASE COUNT          272 a          169 c          216 g          278 t
ORIGIN      
        1 gcacgccatg aagtaaaatg actttggttg gagagggcag gttccctgag cccttctttg
       61 gccgtgggag acggggctgg ctcctgcgag ctggtgaagg gccgttggtt tggaaagggt
      121 caaattcggc tgcctttggc tttgctgcag atatacatat attgagatat ttagttctca
      181 gaaaatgaag aaactaatat tcaagcaagg cttcgggaaa aaaagggctt ccaagatgtt
      241 acagattttg gaaatatttg acaatgttag caacatcaac tactgacaaa aaaaccctct
      301 ctccagaaaa tctttcacag ttgtgccaag aaaagcagct tcgatggaac attttcataa
      361 actatcatca gttatgcagc agcagcttca caaatcagaa atgatatctt caggcactgc
      421 tgtcaagtgt tattcaaata ataccagcct cacatttgaa taacagcaga cattttgaat
      481 taattaatca gatgagatag tctaggcctt ttctcattag tctctgggtc aggcatggga
      541 agatgtatgc gttggtgatg atatacctgt ctttaatcgt gatttatgaa gatttaggat
      601 tgtgtgtgat ttgtcaaagg ttctgggaaa aggctggtgc atatttcatt acctaatctg
      661 agattgattt cgtgatgctg agagatataa ccctattgtt cgggcgtgtg ggaagcgcag
      721 gtagacacgg cgtcccaggg ttttactggc ttatctttgc gactgtcaaa caatgctgta
      781 aacttttact gccagcagtt aacaattcct gctttaatta taggcaaatt cttcattctg
      841 tccaaagggg aagctccagt agttatttag ttaaaaagca taacagacct tgtaactatg
      901 acccggtgta aatcatggac gaagttggca aattt
//
LOCUS       KCKM01002961             952 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46433apa ultra-conserved element locus
            uce-6989, sequence.
ACCESSION   KCKM01002961
VERSION     KCKM01002961.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 952)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 952)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..952
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46433apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>952
                     /note="ultra-conserved element locus uce-6989"
BASE COUNT          285 a          167 c          183 g          317 t
ORIGIN      
        1 aaatgttgct tagtaagagg atattcttag taggaaaagt aatatctgta tcttgtttgt
       61 tttaatacca ggggttcaca acagcattta gctaaagaga aaagtgagtg cgtaaatctt
      121 ttaattaacc tccctgatta tgcatcgtgc gcccttcatt aaatagatct aacagggaaa
      181 aaagccagtt gtttctaata attttctagt gcttttgtgg tttgtatact tcagtgttct
      241 gaaggtcgga tagaactacc agaccataaa atccagccag cgagagatct ggagctaaga
      301 gagcccaagg atttattaag tgatgtgaaa ctctattgtt ttgtgcatgt gttacataat
      361 tgctgtcaat gcaaggctgt taaaattccc tgctagtaat aacacgaata ccattttata
      421 gcttcaagag gagataaaag aagtttctta gtcagcactt caacaatatc acagcacatg
      481 tcagttttat tattctaggg ccttcagttt tggcagatgc tctccattct ggctgtggta
      541 tggtaattac catataaatt aagcagtgaa ataagctgag tgcagcctta tccctgctgc
      601 ctgtaaccag gttgcaagta ccgcagtgtg aaacaggcat aattcaggct gattattttt
      661 agaaggccac atcttgaaat gctgggcctt tatctctatt caagtcaatt taaaaagtaa
      721 attgaagctg tttagttgct gtgcaaacag aaggatcatt ctttctccac aaggtactct
      781 ccataatagc attccaggaa ttagtttaat ccatgcaggt ttgattcata gctgctaatt
      841 atatttcagc atacattcta atgcttcaaa ttatatgtgt ccttacttta atgagttgta
      901 gctagtcctt aaattgggag ctttgcactt ttatatctaa caggctttac tt
//
LOCUS       KCKM01002962             850 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46449apa ultra-conserved element locus
            uce-248, sequence.
ACCESSION   KCKM01002962
VERSION     KCKM01002962.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 850)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 850)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..850
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46449apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>850
                     /note="ultra-conserved element locus uce-248"
BASE COUNT          259 a          131 c          142 g          318 t
ORIGIN      
        1 gtgttgtttg caggataaag acctaatact ttctagatca gatgctcttt tttgttttcc
       61 aaaccaattg taaataagct gctgcatatt ggaacgtgtg cagcaaactt taacaaagag
      121 ctttcctctt tggatttcta aattggtttt tagagcaatc tctctgttga cattttatct
      181 atttaagcaa acacgataac agaagaatgc cgctacggac tgccgtgtta tgaaacatga
      241 actgttagag ttaacacaac tgttaaatct tactaatgat tctatcggca gtaaaataca
      301 ttagcaccaa taattttatt aaagtaggtc attcatctag aataaaaagg tagaagaatg
      361 tgaattaaat gccaagcgtg ctaactcccc tgtacttgtt aacattgaat gtgatgccct
      421 gtaggccttc ctcagtatcg ttaggaatag attacctgtc aggaatatgt atggcatatt
      481 caaataagca ctgcgcatat ttttaaaact gatatgatat gaatccatgt agaccaattt
      541 taatagttca aaatgagtca taattcttgt taacaataca gttattttta aaatttgcag
      601 caatagtggt ccttttttat tttccttatt gaaattaaat gatatgcctt aggtgagtca
      661 ttcatcactg ttaaaggaac ttgccttctg ttggagtttt ttgggttttt atccatatgt
      721 ataatgcatt tcctacagtt ttttgtttta tatttctaca tatatgttgc tagacgtatt
      781 tttaggtgtt tttaaatgat tacagtattt tcctagagca ttgtatttat agttttctgt
      841 atgcaacaat
//
LOCUS       KCKM01002963             865 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46465apa ultra-conserved element locus
            uce-615, sequence.
ACCESSION   KCKM01002963
VERSION     KCKM01002963.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 865)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 865)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..865
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46465apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>865
                     /note="ultra-conserved element locus uce-615"
BASE COUNT          288 a          162 c          152 g          263 t
ORIGIN      
        1 tattcctgat atgccaaata cccatggaca tcaactggcc agggctgcta agtttggcat
       61 ctggcaagat ccagttagca agactgctaa atgtcagctt ctaaactcct tagtatttac
      121 atttcactat ttcgaagggg ggaaaaaaaa tagaaaactc aacagcacac attccaaggt
      181 taatctccac attgtccttt gtgagagaga tgaggatgaa gtaataccta ttttttttaa
      241 aaataacaaa agtaaaaatc acgtataatg aaagcacatc aagaaacaaa ctacaatttc
      301 tgaactgcac tgtttatttt gctgcttgaa acctaagtga cagtatgcca ctataattat
      361 ggggtttctt ctagaccttt actacactgc aggtacagaa atatacggac acatttttgg
      421 agaactgaca ttttgcaaaa tgcagcaaac atttcaattt atacatgaga aaaggaagtg
      481 ttcaaaaggg tatgcatttc aagttattgc aggttatttc tgtgagagaa tttctgcagg
      541 taaaacatgt ttaaatttat ccaacagtaa cgtgtcagtg tatttaaaat catgacaaga
      601 atcttctctc tggtcattaa ctgccctttg acaaattact aggatgatgt acgtttaggg
      661 caagatgtca atacagcata aatcccgtgg cattttggtt ttcttctgga gattaaagct
      721 gttttttttt ttcttgggat aaatgcagca gcaaaacaca aaccagctga tcaaaaaagc
      781 acttctgcca taactccaat aatttcaggg cacaccaacc gacagtagtt ttgccattcc
      841 cagttctttt aaggtttaca tcact
//
LOCUS       KCKM01002964             999 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46480apa ultra-conserved element locus
            uce-6314, sequence.
ACCESSION   KCKM01002964
VERSION     KCKM01002964.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 999)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 999)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..999
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46480apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>999
                     /note="ultra-conserved element locus uce-6314"
BASE COUNT          318 a          200 c          179 g          302 t
ORIGIN      
        1 cagtgagtat caggtaaaag gcaggatctt ttcaatattt aaagaaagat tgttccaatc
       61 ttgcactttt taacactctt cttcacttaa tggtgtgttt gccatgacaa ggtacatttt
      121 tgttactatc tcattcctat cattcctgcc atttaatgaa ctttagcctt cgtcacctgc
      181 aaaaatcctc agcccagact ataaccgtta gatcaacaca gatgccagta cagttgcttc
      241 agttctgttt tgccggtcaa actcgttttt ttaaaggaaa acagcagact gttagcaatg
      301 gaacacacca aggatctaca ctgaccacag aattcctcct gacccgccct aaatctgttt
      361 gctttgagtg tgagataact aaaagacccc gagagttaat acagtacctc caggttatta
      421 aatggaacgc acagaacatt acattattat gctacacatg gctaaggaat tttagtattc
      481 acaggattat ggtaattaag tcttccttca ctttgggtga tgtgacactt gcttgactat
      541 aatgtcactc cacttaaagt ctgtgtaaac aacattatct tcgtcactct gcattacatt
      601 tccaactgtg agcaaaatta caaggtcaaa gtggacaaga atgtaggtaa tcccaaggaa
      661 acatcatgta aatgactagc tcaaggttca agctgggttt tcaagggtgg taaaaggctt
      721 atgtactaca ccagtgtttt agtattggtt tgtagaaggt atcactagca aaatgctttt
      781 ctattagtag ggacacttgg ttggtcagaa catggcaaac ttccttttgt aagcaaggac
      841 tcagctgcca gatatgcaag gagcaagaga actgtttttg tacataaagc tgtcacaaac
      901 tagcagaata ttaattaact ctgtaagtgg cagatgcaaa caaagaaata tatattccaa
      961 tgacttcatt aacttaacac aacaaattct ccattaaac
//
LOCUS       KCKM01002965             854 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46494apa ultra-conserved element locus
            uce-7748, sequence.
ACCESSION   KCKM01002965
VERSION     KCKM01002965.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 854)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 854)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..854
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46494apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>854
                     /note="ultra-conserved element locus uce-7748"
BASE COUNT          269 a          162 c          166 g          257 t
ORIGIN      
        1 tgtagctaaa tcccatatac atttcatgaa ataatcctgc tcagaagatg gtatcatatt
       61 catgcacagc agggtgtgca aatgcctata aatcaaaaca tagaatctga aatatctata
      121 aaaaaaatct gtgcaaattt aaccatgacc ctttgccaga caataggcct tcatatgctt
      181 tgcagcttag cagacaccaa ggaattttgt ttggaagtga tagctactgt ctatgtaata
      241 tttaggacct attcatggag catctggcag aaaataaaag ggtttcctcc tctaacatat
      301 gctaaagaag gatgtggtcc tgtgcctgct cctcctcttc tgactttttg caaatagcac
      361 aacataagag acagttgttt ctggctgccc tgctgcctgt catggctgtc aaatgaaatc
      421 ccatgaatta ttgctcttcc agatgtaaga gatttccagg ctgccttaaa ctgcctgtgg
      481 tttgtggtac tggagaggag agaaacgaga ttaaacttca tctcatcagt gcaatctgaa
      541 aagatcacac agaggactaa taatcacagc tttttcattc cagagctgga cccgagagct
      601 gtgtgttttt gtttcagggc tatgtcacat taagcttgtt ggaagacatt gattaaggtc
      661 aaacaatgtt tgaagatcaa aaataaaatt tttaactctg tgttgctgca tacattttgc
      721 attcttctaa aaatgtcatg cattacttta gccggctgaa acagaggaga ctgtaaactg
      781 agttctgtga ttctgagatg tcagcacttc ttagcataaa cttatgaaag ataaaaaaga
      841 aaatgttcac ctaa
//
LOCUS       KCKM01002966             436 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46510apa ultra-conserved element locus
            uce-4640, sequence.
ACCESSION   KCKM01002966
VERSION     KCKM01002966.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 436)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 436)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46510apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>436
                     /note="ultra-conserved element locus uce-4640"
BASE COUNT          137 a           74 c           99 g          126 t
ORIGIN      
        1 gtttgaaaag cttgactgaa ttcatgacat tcaggaaaat cggatgcccc tgctctcgcg
       61 ccagcagact tgcacacttt cctggtaaat ggatggaatt tgggagcctc tggagttaga
      121 gaaaaggtac agggaacatc ctgatgaggt aaaaggagga gtaatttaat tgtcttactc
      181 cttctgtgct cgagaatatc agacagatgg ggaggataaa acaaggagct caataattaa
      241 ttttcatgtt cctcactagt gggacctctt taatccctgt tcctgtgatt atagagaaag
      301 gttggattct gaagtttcac tcattagcta cgtgttgtat gaaaatacct gtattttcaa
      361 aaggaatagt gacaagaatg aaaaatttcc tctattaaaa aatatcttgg tgtcagggac
      421 tttcgcgaaa gaacaa
//
LOCUS       KCKM01002967            1015 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46526apa ultra-conserved element locus
            uce-7913, sequence.
ACCESSION   KCKM01002967
VERSION     KCKM01002967.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1015)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1015)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1015
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46526apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1015
                     /note="ultra-conserved element locus uce-7913"
BASE COUNT          287 a          226 c          216 g          286 t
ORIGIN      
        1 tgacactgcc taactcaaaa gccacacgcg atgaaggcac gagtgaccag tcaggtcttc
       61 tgggcttaag cagctgcagg ttgctgccct tagtagtatt tcacctcctc aggattcact
      121 agcagtgaag aggtgaaagg ctgcacatta aacagtttgt ccgaaagcca tgtgcatagc
      181 aaacttacac cagcttctat acaactattt gtttgaactc tgcagctgga atgtttccag
      241 cataaggctt ttagagtgac tccagcaata acagaagcct ttggattttt cttgttttgt
      301 ttaaatccac tagccatgtt caaaaataat atttcttcat gtgttatttt tatacggtgg
      361 ctagcaggca ccttagtaac cagccagaaa tcaatttcaa ccaccatcaa cccctaaact
      421 acagtaccag gacggttggc taaagaaagg aaactgattg gctgtagtct gaaacttgcc
      481 tagtacaagg tgtctggctg actttgtcct aaataaggct aacattagtg aactaagaga
      541 acagcatttg gttgcagtct tgcactcagg aacatccttc gccgatgcgt tggcaagatc
      601 tccctacttt ccgatccagt ttcaccattt tcataatggc ttcctcgcgc ccacgtccca
      661 tgtggtcaaa tgtgcagtcg tgttgttcag gcaggcgatg taacatacag aacacgtaac
      721 ctgccaggga cagggaaggg actcaggtaa agtggcagaa tcttacccga atcagaagtg
      781 aaggttcgcc ttcactgggg gattactcgg ttcccaaaag ttaaggccag cttaaagttt
      841 ttacttctct tctttacagg gttgtactaa gtatctgatt atttactgaa tttttcttga
      901 atatttatca agacagtatc aaagctcaag tcatattaag gttgggtggt tcttctgcta
      961 tatagaggaa gccccccaaa tcatctaaac taggtatgcc cagagagtaa caaag
//
LOCUS       KCKM01002968             369 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46541apa ultra-conserved element locus
            uce-4827, sequence.
ACCESSION   KCKM01002968
VERSION     KCKM01002968.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 369)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 369)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46541apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>369
                     /note="ultra-conserved element locus uce-4827"
BASE COUNT          125 a           57 c           76 g          111 t
ORIGIN      
        1 tgtgtcagtt gtaagagggt gcacagtgtg atcactatag ctcagtggct gcaaagcaga
       61 aaatgaagat tgtaaaaacg tcacataaag aaaaaatgca cagtggattc gttttgcgat
      121 gctcataatt cagtaatgcc tttaagtagc tagaagaaat ataataaatg tttttccaca
      181 acattgatca tactgtatca gaggaaatat tagtgtgcag ggagccatga ttatgctggt
      241 agtaattctc ggtgcagaaa actcctagaa gatgggaccc tttataggct gaacttttat
      301 tggctgcagt tatttacctt taagaataca cctaatacac tgtcctataa ctaaatattt
      361 ttgtgaaaa
//
LOCUS       KCKM01002969             979 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46557apa ultra-conserved element locus
            uce-1094, sequence.
ACCESSION   KCKM01002969
VERSION     KCKM01002969.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 979)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 979)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..979
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46557apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>979
                     /note="ultra-conserved element locus uce-1094"
BASE COUNT          292 a          156 c          187 g          344 t
ORIGIN      
        1 tctgtatttt agtggtattt acacttcaca gaactaaaac aagaagaatt ttacatcacc
       61 ttgcgtgcct catatatcgt ggaccagtta tgcatctgga gtagagttat aaactatggt
      121 tgcaaactag gttgcaaaca aattttgcct gaggcatgaa ccataaatta aagtaataat
      181 catctctgta agagacaact tttctccgct gctcttttaa aataaaaaag aaagtaggtc
      241 agagaaattt aggatatttt agagtatgta cagtattgta ttgtttgcca gcacctaatt
      301 tacaattaca gagctacatg aatattgaaa tgattcagct tcccattata aatgtatgtg
      361 gcagtttggt tgttgatcag tttatgaagt taatgcaaat gaaactgtct tcctgtcagc
      421 atttgaaata tataatgcag tcatgttgta tattcaggga caggccattg acagtcaatt
      481 aacaagtttg attggtatgt caactcattc ttttgaattg ttaatagtat gttaatagca
      541 ttcatttctt tgtgcagtcc catttgcagc ttcacagtta cagctatttt ttatgattct
      601 gagtaaccta aaatagtgcc ttaataatag attattaaac acctgtctgg tgtagcttag
      661 ggaggttttt ctagactggg agtttgcagt ggatcccttt gatattcaaa tcaacaaatg
      721 atagcctttt tattcaaaat gtaagttctt ttgatggtta gcttgttaag aaatattcag
      781 ctccagtctg acctgatctg gtttcccatg gaaaagatct gatgctgttt gaaggttcat
      841 aaatggaatg ccaatgacaa tttgttgttg acgttttgct gcctcagcct tcagatgctg
      901 ctggttgatg tgccgcttta gcttcaccaa ataatgcttg caggtaaatg atcttctgat
      961 tgatcagata gtttcaaag
//
LOCUS       KCKM01002970            1149 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46573apa ultra-conserved element locus
            uce-6383, sequence.
ACCESSION   KCKM01002970
VERSION     KCKM01002970.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1149)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1149)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1149
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46573apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1149
                     /note="ultra-conserved element locus uce-6383"
BASE COUNT          295 a          248 c          270 g          336 t
ORIGIN      
        1 ccttgctagg cttgatggat ggggatacaa agaaattcca accttgggtc cttagttcaa
       61 cactgctaat agtgccatgc tacctgtcac agctgattgt ttccctaaaa ctgccgtagg
      121 agctgtgtca gtgatgaaca ataaattcag tcctcttgat ggccatgatt tctcttgttc
      181 tttaaccatg tggaagaaaa ttcgggcaac tatctcttag attctcaaga gctattctca
      241 aatacctatt tgatttggag ggaagtttgt tccattcttt gaagaatgtg cttgactttg
      301 ttccctcggc ataggttacc cccaggagtc aggtccctac cactctgttc ctccctgcat
      361 gcccatccca cccattcccc acagtaatat tttgctaccg gtaaaatcct gatctgtcag
      421 tgagaggtga tctaagtggt tatggttgga tatagcaggg aattgtctgt gtctatcacc
      481 gtgttattga acttagagaa attaaaagga gacctttcga cctttgatca ggtcttgaca
      541 agttcctgct ttttgcccga aggatggaca tccgtcggat cagctttgat acagatgacc
      601 tgtcagatga tgtcataccc cttgctgatg ttcgcagtgc tgtggctcta gactgggact
      661 caaaggatga ctatgtctac tggacagatg ttagcaccga ctcaatcagc cgagcaaagt
      721 gggatggatc gagccaggag gtacagcgtt aactgcatgt ggagttcatc tagccaggag
      781 acttcccaag catcagatct gaagccactg agaggcacag gcctgaggag ctgcagctca
      841 tggttgattt gtttttcatt agtttgccca gttctggctc agaagagccc caagatcact
      901 acatgcttca tacacaagtt tgatatatgt tcctgcttgt atgaaaaacc ttgaattagg
      961 gcacgaagca tgttgatttg taatagccct gaaatctggg aggaagaagc attaagtcct
     1021 gtattatgta ctacatttgg aacaagagcc gtgctccttg cccttaggct gatgttgcca
     1081 taaatgaggg gaacagagtt caaagtttgg agctgcagtt tgaacagctg tgaaaaatag
     1141 atgtttctc
//
LOCUS       KCKM01002971             670 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46589apa ultra-conserved element locus
            uce-4426, sequence.
ACCESSION   KCKM01002971
VERSION     KCKM01002971.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 670)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 670)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..670
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46589apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>670
                     /note="ultra-conserved element locus uce-4426"
BASE COUNT          225 a          121 c          140 g          184 t
ORIGIN      
        1 cggagctggc tgacagcagg caggagctaa acccaggtgt aacgtgtggc tttttaagca
       61 gtttagtcag aagtgctgcc gcattcacag cttttcaagt atttttaaat cacttacaaa
      121 agcaggatta aacgatcagg aattccattt aataggacaa ataaagaaat aacaatctac
      181 tccatcagcc ctgagaaagg caggtttgat ttaagaaaaa aaaataaaaa aataagtata
      241 aaagaaggag agaaaaagga aaggggggtg gaaaaaagga taatgtgtgt ttactcaagc
      301 aaagaaaaaa atatttaagt gatgtagggg agaagattgc ggtaactagt gaagaataac
      361 atcgtctgct ttgctgtcaa atcacacaag aatttcagta atagattctc attctgacac
      421 tcaattcaat tcgaaggtga tcctgcttta tcccaacaca tcaaatatta aacactcgta
      481 ttagccaggg tgccgtcgcc tttcccggct tagacgcggc aggaagcttt tccccctact
      541 ttctctcact cgctataata ttctcaatgt tatctaaaca tgccttcata cactggggtt
      601 ccttatcaat cccatttggg gagggagtgt acttaaaacg gtattagttt ggggggcttt
      661 tattattatt
//
LOCUS       KCKM01002972             480 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46605apa ultra-conserved element locus
            uce-7694, sequence.
ACCESSION   KCKM01002972
VERSION     KCKM01002972.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 480)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 480)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46605apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>480
                     /note="ultra-conserved element locus uce-7694"
BASE COUNT          173 a           77 c          118 g          112 t
ORIGIN      
        1 tataggtgct ggtgtgctgc agaaagatta tactaaaagc aagcagtagg tattacagag
       61 atggagggca acaaagacag aaagagaaat caaataactg aaggggggaa aaaaaaagag
      121 gggatgcttt ttattagcaa gtctcgaggg aattaatttc atcagtgcag cagggcatga
      181 gcaaaccacc aatgaacttg aaagtgcatt atacccatta aagggcatga attttctaaa
      241 ttgctaatgg ggatacattt tacactcaga gcactaacct gaacagctct tgtatggctg
      301 gttccacggg aactgcagag agatggaaaa tatataaaaa tttatcatct attacaagta
      361 cccctcttct acagaaaatt accagaaagg ttgtgtaaaa gcaagggtca gaatgaatcg
      421 tgcaaagaga ttccggagga tgaaggtcac cctgagcagg ggccttgagt gatttactga
//
LOCUS       KCKM01002973            1063 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46620apa ultra-conserved element locus
            uce-2605, sequence.
ACCESSION   KCKM01002973
VERSION     KCKM01002973.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1063)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1063)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1063
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46620apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1063
                     /note="ultra-conserved element locus uce-2605"
BASE COUNT          342 a          192 c          186 g          343 t
ORIGIN      
        1 aaaactatta aatagctctt gacttaacaa aagaagcaga aattcacaca taattcagag
       61 acaactggta aataactact attatgttaa aatataaaca tgcatacatc tacttcctcc
      121 tagcctacag tttggatgca gatcttaaca aaagaggcat aaatacccta gcaagctgaa
      181 aaatcttggt agtaaaatgt gtgtgtctac ctatatacat atatatttat aagtatacac
      241 aatcctcatc ttctatttct catttactat tttgcaaaat caccactttg ctccctcagc
      301 agtatttgtg ctctttaaaa ctcctgttct gaagctgttt catgtttgtt ttcaaagact
      361 tcttttaaaa tattagtggg ttgtgagggg tttttttgac agtaaaaata agaaactagc
      421 tttccatttg ggttagaact gagatgaaat gaggaatggc tgccaccaag cagaaaattt
      481 gctcacttta tgtgtgccag ttaattacga cacttcagag gcgcttctga aaggataagg
      541 caagctgcat aaatttagct gtaatccagg caggcaaaac taatttgcag gggatggcct
      601 tatctagctg ctgcagcttt ctcagaaaat taaccttgga tatttgggcc caattcagaa
      661 agtgtttgat ttttttcctt tcctgctcag cataagagaa ttttaaattc aatacaatac
      721 ctgactttta agaggcacta tgaatgctgt aggcagttca gagttattac tgacaaggaa
      781 aaacatatat ttatatgcgt acatatatga ttgtccttcg tgcccattat cctgccttct
      841 tgcatgtgca tcagagggtt tatcaccata tgtatggtct ttggattaac agaagatgca
      901 gctcctttta atgtacttag aaaaattcat caaagttcat tgcagaagaa gtcatgcata
      961 ctgacttgtt cattccagtg gaaatgaaga aatcctcata aaaatagaag tttaatgaag
     1021 tgttgaggca aagtcctgcc tgtcattcca attaccactg att
//
LOCUS       KCKM01002974             872 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46635apa ultra-conserved element locus
            uce-7554, sequence.
ACCESSION   KCKM01002974
VERSION     KCKM01002974.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 872)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 872)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..872
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46635apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>872
                     /note="ultra-conserved element locus uce-7554"
BASE COUNT          237 a          184 c          164 g          287 t
ORIGIN      
        1 atatttctat ttcttagtcc tgtattagtt tggcctcctg cccctaaaac aattgggagt
       61 gacttccttg tcttcgacat taagagatct ttcctgatag ctatgtaatt gttgttcccg
      121 gaagtattag gaagcagact tgagtcttta tctcttggac aacagcagcc cttccccctc
      181 tttccacccg aaaaagtagt gaaaagaact ctggagctgc actgtgtcta atgcaaaggt
      241 catcatctga gcatagacct atttcatctt ctctgaattg tgcatggttt aaaaatataa
      301 cagggccttg gcatacactg attggaaaga aattaattag aattaaatac tctgtgcttt
      361 cctctttcag caagtgggat cccagcgttt cagtgtcaac atgcctcaca agttcagcat
      421 tcacaattac aaagtgccca ccttctgtga ccactgtggt tcattactct ggggtctttt
      481 gagacaaggt ttacaatgca aaggtaagga ttaccacttc agaacttttc tttttctttg
      541 tgagttgtag acttggaaag acttcaaatt attctgtctt ttccagcatg tacagaaatt
      601 aatacagagt aaatagtgga ctgaaaagga ggagcatgag aatttacatc acttcagctt
      661 tttgtgtttt cggttgttaa actttttaaa caccgttatt ccagctactt tgtcctttag
      721 taccattttc aaaaattact cttacgtatt ggctgggcta ggcagcatca ctcctgtgtg
      781 cccgtaccca gaaaatgagg tattcttata tctggcagaa ccacgctttg tgatggtcta
      841 cctagcccct ctattccaga aaataaagga tt
//
LOCUS       KCKM01002975             458 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46651apa ultra-conserved element locus
            uce-6855, sequence.
ACCESSION   KCKM01002975
VERSION     KCKM01002975.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 458)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 458)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46651apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>458
                     /note="ultra-conserved element locus uce-6855"
BASE COUNT          152 a           65 c           94 g          147 t
ORIGIN      
        1 ttctatttca gtttcttgga tttgtcagta cggaaaaaaa ggaaagtttc aggttcaatg
       61 ataatttttc caaaaaatgt ataggcattt gcatggcaca gcttttatat aagtgtggta
      121 ttacataaca gatggaagtt taatggagta aaacatagtt tgtaacaggt tcattgtttc
      181 atatgctctg gatcactaaa ttggcaggta gagatgaaag gtgcattaaa atggacgtcc
      241 tgaaaattat agaattctct caaaggaata gagtctttaa ttttgaatta tacagctaat
      301 tttaatgaat tggaagccat aatgcataac ctttctttca tgcaggaagg aactgtgagc
      361 tgtgcaagga tttccattac agacaagcaa gtgcagatct ttcagctctt gatgtttgca
      421 aaccctgtga ctgttatggt acaggcacca aaaataag
//
LOCUS       KCKM01002976             642 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46665apa ultra-conserved element locus
            uce-2383, sequence.
ACCESSION   KCKM01002976
VERSION     KCKM01002976.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 642)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 642)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46665apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>642
                     /note="ultra-conserved element locus uce-2383"
BASE COUNT          191 a          129 c          120 g          202 t
ORIGIN      
        1 ggaaccctgc ctaacaagaa ccgtaggctc agcttcagac tgaccacggt gtaaggcaca
       61 gctattattc tgagcaaata atttccttac agcaatatct acttctttca ttaatctaca
      121 tttctgggtg cactttctgc gtttcggcag tcatactaca aaaggtgggt tacttaagaa
      181 acaattaggt gcgtatacaa aacaatttgc aggcagtctt actctttcag cttcctaagt
      241 gaagtgcctt tcaaggctga tttataacac tgtcgtcttc agaaggcaaa ataattaata
      301 ggagcatgga cttctaattt cagtgacttc cagagaaagt ggatttcatt tgatttatga
      361 tggccagtga ctttgcattt tatcagttca ttcactcatt atttatgctg atgaccaatt
      421 tcaatgggtc gctatcatct aactcgctac taatcaaaga gaattagggt tcactgcatt
      481 atttagaagc cactaattta tcttcagaac aagtatcaag aatagtttgg ggccttctat
      541 gctaaaaaga agcacagctg gcaaagccac agcatttgct gggtattaca aattaatgtc
      601 gtaaggctac ttgcaagtac tgcttcttct cacagaagtt tt
//
LOCUS       KCKM01002977             766 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46681apa ultra-conserved element locus
            uce-5120, sequence.
ACCESSION   KCKM01002977
VERSION     KCKM01002977.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 766)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 766)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..766
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46681apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>766
                     /note="ultra-conserved element locus uce-5120"
BASE COUNT          213 a          154 c          173 g          226 t
ORIGIN      
        1 tctgccggtg tctctgatga ggtttcggcc tcggctggga tttctctacc ttacttttcg
       61 tttggcttcg tgctgaaaaa aaaaaaaagg gatttctttt tttctctcca cgcttttggt
      121 tgtaatccag tgttgatcta gggggaataa ccgttcagcc tggctgaaaa aaaagcatcc
      181 gttgaaaagt ctcaaagaaa tataccacgt gaggaaaaaa aactgggaga agatcggaat
      241 ataatcattt tttctatgat aaaactggtg cccctcttca ggagaactgg tctcaattta
      301 ttattatgca accacaagga tctcttcttt ctcagggtgt ataagctgct ggattgcttt
      361 tcgcccaaat caatgtggtt tctttggaac attttcagca aaggatcgca tatgctgcag
      421 tgtctttgtg gcaagagtct taagaaaaac aagaaccaaa ctggtaagca atccattgca
      481 ctgcgttgtt tttcttttat gctaccctgt ctgttgctcg ccgaggtaga tctgcaatcc
      541 tgctgagggg agaaggggga aatataatga ggccagcacg gacatgcatg tgcatacgtg
      601 tatgaataag caaggagcgg tttggattag cttcagccac tgtcaccacg gaaaagacaa
      661 aaaaaaatca aaggcgaccc taacccattc tgcatcccct agtttctatg tgctatttct
      721 aaggaggaaa cttttatatc gctacccttt ttgaagggaa gctggt
//
LOCUS       KCKM01002978             807 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46697apa ultra-conserved element locus
            uce-7997, sequence.
ACCESSION   KCKM01002978
VERSION     KCKM01002978.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 807)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 807)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..807
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46697apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>807
                     /note="ultra-conserved element locus uce-7997"
BASE COUNT          232 a          198 c          163 g          214 t
ORIGIN      
        1 caagtcactg ttgaaaacca tccagttcaa gaaaccacct tccatgtaac cccacaacaa
       61 cagaatgcat tacatcatca tcacggaaac agctctcacc accaccacca tcaccaccac
      121 caccaccacc atcatggaca gcaagccttg ggtagccgga ccaggccgag agtctacaat
      181 tctccaacaa acagctcctc cacccaggat tctatggagg tgggccacag tcaccactcc
      241 atgacatccc tgtcttcctc aactacttct tcctctacat cttcctcctc tactggtaat
      301 caaggcaatc aggcctatca gaaccgccca gtggctgcta ataccttgga ctttggacaa
      361 aacggagcta tggacatgaa tttaacagtc tactctaatc cgcgccaaga aactggcata
      421 gctggacatc caacatacca gttttctgct aatacaggtc ctgctcatta catgactgaa
      481 ggacaccttg caatgaggca aggaattgat agagaagagt ctcccatgac aggagtttgt
      541 gttcagcaaa gtcctgtggc tagctcgtga ctaaactgaa actaagtttg tttcttgtgt
      601 gtttttatag aagtggtgtt tttccaaaaa caaagtgcaa agctgcttga atcagaagga
      661 gataaactca ctgaaccgct acaggagggc aaagctgact atttttttaa acttgaaaag
      721 attgcaaagg gacaatgaag ttttttttgt tggttttggg gggggttggt tttttttttt
      781 ggtttgggtt tgtttggttg taaaaat
//
LOCUS       KCKM01002979             902 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46713apa ultra-conserved element locus
            uce-1102, sequence.
ACCESSION   KCKM01002979
VERSION     KCKM01002979.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 902)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 902)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..902
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46713apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>902
                     /note="ultra-conserved element locus uce-1102"
BASE COUNT          284 a          203 c          171 g          244 t
ORIGIN      
        1 gatctgatgg aaaacagaaa ttccaaacga ccactcttta aagcacagag attgcctttt
       61 gtgcaaacct agcttaataa cagggactgg aagtccactg aaacgcatct gtagttaatg
      121 aaagctctct attaacagtg aaggaagaat ttaactcaaa gcttttctgt aggacttctc
      181 aacttcccgc tctacttata gcagactgtt gtgatacatt gtgacttcac acagtgggta
      241 ttaagtgagt taattcaaag gagctgaaac ctcattgatc ctaattgaaa gcaatacacc
      301 caaccaaata gttttctacc ccatctgctc tggcctgcca ccagctattc aatacaagag
      361 aattaatagt ttcagatatt ctaaccgacc caataaaagc actcatttaa gcaggactgc
      421 attaacaaag tgaaaaacca agggcaaaat gggttcaaat ggagcatttt actcctagtt
      481 ggctttaaca aagctgaata atgcttattc tgacttttta tgtgcaagac ttgataaact
      541 gaatgcgaag gcactcaatg atcagtcaac gagcattgat gaatggtcat taggaccccc
      601 ccaatctcag ggaaggccat tccacaaagt ggcacaccag cttgaaaggg cggactcact
      661 aatgtccaga tttccccgct tgcttgttcc actttcactt tcagaccact ggccaccaaa
      721 tgaggctgac atattggaaa ataatctttt atgggcgagt ggtaaataaa aatggaggca
      781 ttagctgggc tttcaaattc aaatctgcta gttttgtcag cccccaaacg ttttgatttt
      841 ccacccagct ggaagctatt agtgttttct taaggcatcc cactgacagg gcaaacccac
      901 ct
//
LOCUS       KCKM01002980             400 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46744apa ultra-conserved element locus
            uce-4452, sequence.
ACCESSION   KCKM01002980
VERSION     KCKM01002980.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 400)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 400)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46744apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>400
                     /note="ultra-conserved element locus uce-4452"
BASE COUNT          143 a           68 c           72 g          117 t
ORIGIN      
        1 aatgagataa gtaagaatta tttcttaggt aatttataaa aagcactaac taccttccta
       61 ttacacttta ctacaaaaaa caaacaaaag ttacctccat actgctcttt gtagggcaag
      121 ctgttctttt aggtagaaga gtttttctgc gaagttggta tggactattt tgtgcaccag
      181 gacctgattc ttctgcaacc atatctgcag gaacatcgtc atctgtcaaa aaaaaggaag
      241 tttcctaagt tgaattgtag ttttgtttta taccaaaaac tgctatagat attttcaggc
      301 aaatacatcc agtcaggagg gcaggcagaa atgctaaagc acagagaact tttagtgaaa
      361 aatcagaata ggcacagcat acataaaatt acatgaggaa
//
LOCUS       KCKM01002981             749 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46759apa ultra-conserved element locus
            uce-2577, sequence.
ACCESSION   KCKM01002981
VERSION     KCKM01002981.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 749)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 749)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..749
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46759apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>749
                     /note="ultra-conserved element locus uce-2577"
BASE COUNT          198 a          173 c          146 g          232 t
ORIGIN      
        1 ttcccccttt tcctcagcaa gagtaaaact tgagcatggc caggtgtttt cacttcagag
       61 gctccaatgg caacaacaac tccagtgctt ggaagctaac aaatttgttg tgtcacaatt
      121 gataatcaac tctagtaaaa gaatgtccaa atcaattgag ctttagcaag ggcaaactga
      181 ctggacacag ccaggctccc agcaaaagta ggccaagctt gataaatttg cccttattat
      241 agctattgat gtttaaattt cttcagggat gttgttacat gggtgcctcg tggtgacaga
      301 ggtacgatga cctccttcga tccttaatct acacctgtta gttggctccc tagttgcttg
      361 tgagtatact caagcttaaa ggttaacaaa agaaaaacag gccaagttta cgcgactgca
      421 gcaacggatc aatgcagagt aaataacctt ctctgtctta tttccccaag cattattgat
      481 ccgagttctt tgttctttgt catgtttctg tcttctaatc ccaggggaca ctaaacgatc
      541 ggctcatatt ggacatgtta actggcacat tatgacagct accattttgt cactcaatgt
      601 ggtgctatat ataaagaacc ctcagttcag gggtttctaa gctgctctct ctgaaaggag
      661 cctcagttac ctgctttttt tctttcggct tcctttgttc gctcacccct gccccttagg
      721 tattttacct agagatttgc agtaacact
//
LOCUS       KCKM01002982            1024 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46775apa ultra-conserved element locus
            uce-4195, sequence.
ACCESSION   KCKM01002982
VERSION     KCKM01002982.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1024)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1024)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1024
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46775apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1024
                     /note="ultra-conserved element locus uce-4195"
BASE COUNT          287 a          198 c          195 g          344 t
ORIGIN      
        1 aaaatgttga cgagtttgag aggattttta tattttaatt aacacatttt atttgccact
       61 aaacaacttc ttaaataaaa ttctgcaaag aaagaacgac gttatccttt cctattatgg
      121 tacgaatgta gatccggtga gttccttccc tttattaata gcaaggcttg cttgtgaaac
      181 ccaaagagtt aatcatataa atttctcctt tggaccagca gacgatttcc atcattttca
      241 gcatttgact ccggaacatg tatagggttg ttacacctct ctgcgattca ttctgctgcc
      301 aacttcattc ccttttctct gcctgcattt taattcaaac aacatttgta tttttgagcc
      361 aggatctgtc agaagtccct gtggctagtc tgtggtacaa gtagcagcag acgtggctta
      421 cccatatggt gtggtgcttc ttgtaaaatc catatggcct tgttgaaggg aatcccagcg
      481 gggatgtgaa gggtgttaat acccttcagg ccaggccttt ccctcctggg gcttctatgg
      541 cattgtcttt gcaatctgcc aaagcacaaa cttaattcct ttttaataat caattatttc
      601 agtccaggaa cgtgtgctgt attttttgca atcgtgtatt cctcaaactt gttatttctt
      661 aggagtattt ttggatattt ttttaaaggc gagctgtagc tgctagcaac tgccctaaca
      721 aaagcctttt caaaaatcct aacttgattt cttttgcttg tgtttacagg aagtgctgaa
      781 cagcgtcccg aagttctgct ttccttttga cgtggaaagg tatgtgatac atttttattt
      841 attttaaaat atttcaaaga aaatggtatt cagcagaatt gcaaggaaag atgtagagaa
      901 aaggaaaaca cactgtactc cctaaactcg cacctgcaga tgagaaatat gtatcctttc
      961 gtgctcaagt aagtatgaaa ccactggtag caagtaatta tagcaaaact gtacagaatt
     1021 ttgg
//
LOCUS       KCKM01002983             647 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46790apa ultra-conserved element locus
            uce-1036, sequence.
ACCESSION   KCKM01002983
VERSION     KCKM01002983.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 647)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 647)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..647
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46790apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>647
                     /note="ultra-conserved element locus uce-1036"
BASE COUNT          184 a          146 c          116 g          201 t
ORIGIN      
        1 tgttgtacat tttctacaca tgcacgcatg aatgcagaca cagacacaca cacagagggc
       61 attgaatagg ctgtttgata tttaatctga atgcagctgt ttagatattt gtttggtctg
      121 gatttttcat taaaaatatg tggttaatag cagccaacct gatttgcatg tgtgtgtgtc
      181 tgatttgttc accgctatgc ctcctgtgtc ctacatctta atcacatcca ggcacccgcc
      241 ccattacatt accagaaggg aagtgatgga catcccttga ctctcttcat gaccccctga
      301 taatcctgtt tcacacacag gctccctgct gtatgaaaca caaaagctgc cactgtagtt
      361 ctttacttcc agtcgatatt ctgacagact tgatctagca aattagtatg ctgtggtagg
      421 ggcacgacaa aagacccttt tgacacactc tgaatcgata caaaggccaa cagagagcca
      481 tttcaccgta gttctgttat ttttcccctt ttgatgaccc ttcttcttct tctttttttt
      541 tagcttgtat gaccttgtca gatttaaaaa cataatgtta gaaaagtcat ccttgctcag
      601 aaaaagaaaa acctaaacat gcagaagtgc aagaatacca atgtaaa
//
LOCUS       KCKM01002984             595 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46806apa ultra-conserved element locus
            uce-5847, sequence.
ACCESSION   KCKM01002984
VERSION     KCKM01002984.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 595)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 595)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46806apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>595
                     /note="ultra-conserved element locus uce-5847"
BASE COUNT          188 a          104 c          101 g          202 t
ORIGIN      
        1 aaaggactca ttttcaaaca cacgctgaga tgtgagtaga agcataattg attgggtact
       61 agctctctat agtaggtaaa taaaaataaa aagacttggc acttttaaaa ggtaacttta
      121 ccaaagaaca aagagccagt aaccaataat tctgatttgt ctcagcatta cgtcttctgt
      181 actctttatt tttgccggac cagtttgcgg ttaggagaat gtgccttttt tgtacatttg
      241 catttaggtt ttataatttt aattgatgta tggacacaaa agcatgaagg aagacttgga
      301 tccaagcagt gccacacttt acatcatcac tacaagtgtt aagtgtaaag aaaaccaatt
      361 ttgaaactat gaaattcctg attcataaat acacagttat ttgtacgtca catattagat
      421 aattcactgc tactaaagct ctttattaca attgcatatg ttttaaatcg aatgataaat
      481 taagttgtct tccaaaactg tgtacttctc tggtcagctg tatatgatca gttatctacc
      541 tcaaagttta tttccttttg tattgggaca ggttgctggc cctccctgtt tccac
//
LOCUS       KCKM01002985             958 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46822apa ultra-conserved element locus
            uce-6472, sequence.
ACCESSION   KCKM01002985
VERSION     KCKM01002985.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 958)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 958)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..958
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46822apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>958
                     /note="ultra-conserved element locus uce-6472"
BASE COUNT          319 a          164 c          165 g          310 t
ORIGIN      
        1 tttttccctg aagaacagta agaaaaatga tggattaaaa cagatgcaga ctgtttgcag
       61 ttatataaga ctattaggta ccctgcttgt tctggctttt gtaatttgtc catgtcctac
      121 tttatataac tcaatccatt gtgagcaaaa acatgaaata ccagaatagt tcatatttca
      181 ttttgtcagc aaattagaaa aaatataaaa ccaaacacaa tagacatcat atttgctgag
      241 tataaaactg agtatttttt tgtatcaaag gagtctgaaa agaacagaag gttaagaaga
      301 tttttttttt acaatgagca gatgtgcttg ttactgttga tggacaagct tatccattta
      361 catcaattaa tatcaacagc aagcacatca atatggaagc ttgtcctgac gccttgattt
      421 tttcccatct gacaggtaat agtagggctg ggaaaatgtc acaacaattt agtcatgctt
      481 cactggcttt aactagttca gtgacaatgg gaatgcatca tgctaagatt ccttatgatt
      541 cataatggta ctgcattagt cggctattgc agaggattta aactagtctt tgtcaattaa
      601 aggtttaagg tcaaatcctc tttatggttt tttcattcgt gcattaagta aaagcaagtt
      661 aaaatattta tgaatgacac taaaatgtgg aaactttctt taggaacctg tcttttcata
      721 ttgagtcata actgaaacca actatgtttg acaaagaaag gttattcatc acatggcatg
      781 gcttatccct ccccttctcc aaaggcccag gctacaatct actcagtttt ggcaggaaaa
      841 cttctgtgaa taaaaacctg cagtcataac cattttagac tgtgagacaa agttatgcct
      901 cagcactttt gtcaatgagc aagataagac cataatattt ttaaatcgaa atgtgacc
//
LOCUS       KCKM01002986             272 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46837apa ultra-conserved element locus
            uce-6032, sequence.
ACCESSION   KCKM01002986
VERSION     KCKM01002986.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 272)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 272)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46837apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>272
                     /note="ultra-conserved element locus uce-6032"
BASE COUNT           78 a           57 c           52 g           85 t
ORIGIN      
        1 cctcccatcc ccaactttgc tgtggctctc taaatagccc agaagtgata aatcaaagcc
       61 tgaactgtaa ccttacactt atatacttgt taaatgactt ttttacagtc tgttattgct
      121 agaaattgga ttgcttttaa actaatgttg tctggcgggc aaaagtgagt gaaaccgcaa
      181 agcctggagg aacactaatt acttgtttta attagcagca actttcacta gagtataatc
      241 tccctacagg ccacttttcg gtaggtgtgg ga
//
LOCUS       KCKM01002987             969 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46852apa ultra-conserved element locus
            uce-6692, sequence.
ACCESSION   KCKM01002987
VERSION     KCKM01002987.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 969)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 969)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..969
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46852apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>969
                     /note="ultra-conserved element locus uce-6692"
BASE COUNT          274 a          157 c          206 g          332 t
ORIGIN      
        1 gcaaggtgca gaaaatggaa ttatttttcc ccaaggtcat ctattaaagg gggggcaaag
       61 ataaacttca ttactcccaa ggagcagcaa aatgaagcat ttcttaaaag tcacaatgtt
      121 ggcttttctt gtgtaaaatt caattttgaa gactttctta ctaacagtag gttgtgtcaa
      181 acattttttt tctttttaat agcagaatgt aaccattgct taatcctctc tctttcttta
      241 tgaagaaatt gcttaaaccg caagcgtaga ttaggtacag ggggagaatc tcagtagttt
      301 tagatcattg gcaagggtgt ggggtgtact gtgtgttttc ttgctgtgta tcattgaaaa
      361 tatagaggac ttcacagcag aagtgtatgt tttaggtttg cacacatttg tgagaatgtt
      421 aataccgcgt tgtgggaatt gtgctgagtt ccctgttatc atgcaagcaa ttgctaactg
      481 tagacctctg actttgtaat ttgttcttta tggactagcc tgcagccaat aagcaaaatc
      541 aatagtcttt gctgaaaagt aagcaagtgc cagtgtgtta tgtgacaggt gaagatacat
      601 gtgcttacca ggggtcaggg ggccacatca aatttctctc tgacttcttt tcaaaaagct
      661 aaatccattt agggagcatt cgtcattgga aaatgttgca gtagggaatt agacaggctc
      721 ctgctcttct tttctcattt aacgatgttt gttttcaaca gtctgttcaa taatgtcact
      781 gagaagaaat tatgtgagaa gaataaagtg cttatagtct atttatttat tcattcattt
      841 ctgtagaata acactagctg ttgcattctc atgtttatta atgctgttgt ggcagcccaa
      901 atatttgttt gttctccttt tcctttggaa aaaaggtggg acagagcagt gtggaacaga
      961 ttacttact
//
LOCUS       KCKM01002988             871 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46867apa ultra-conserved element locus
            uce-3987, sequence.
ACCESSION   KCKM01002988
VERSION     KCKM01002988.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 871)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 871)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..871
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46867apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>871
                     /note="ultra-conserved element locus uce-3987"
BASE COUNT          257 a          219 c          175 g          220 t
ORIGIN      
        1 agccagccaa aatagctgaa gggaaatagg aaggccacat gtggaactaa ttactcatgt
       61 agaggctatg acaaagaaca tttctccaga cttttcatgg gggcttcact ttcaggaagt
      121 aactctaatt actgttcaag tctcggcagc ctgcatgccg ctgacagttc caagaaaaaa
      181 atgaacctat ttgccctttt cttggtctga aatgccaaaa tagaaaagca caactagagt
      241 cattaaaaag aaagaaaata agcactggct tattgcatta gcttcccgag cagaatcctt
      301 tttataaatt cgttttttca gccttcacaa aacagcaaat tctgcgtcta cattaactca
      361 ctctccgttg gctgcggtga aactgtacat cttgactttt tacagctttt ccatactggg
      421 gcccacttcc tgcccagttg aagaaaaaaa tctggcctga agatgaaatg actgcttaac
      481 attacactaa aacatctggt accattttat acacagaccc atgtctgaga gcaggcaatt
      541 ctagcggtct caccagcggc acagtgcata cccaaacctc cccagggtga catcatccca
      601 tatatggact ctcaggccca gccctccccc ttttcctggt cctaaattca ttgccagatc
      661 cccagtctgc tgcaaatgtg ccacgtcaag actggaaatc acagcacttc agtgtgtttc
      721 agtgagtgct gcagagtgtg agggagagcc gagcacaacc cgtgatgcag gaaggcagtt
      781 tttccccgag actaaaagag gatttaaaat aaataaatag acgcgtccgg agatcctgct
      841 ccgtcgcccc agtgttcaga ctacctgttc a
//
LOCUS       KCKM01002989            1024 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46883apa ultra-conserved element locus
            uce-4435, sequence.
ACCESSION   KCKM01002989
VERSION     KCKM01002989.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1024)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1024)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1024
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46883apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1024
                     /note="ultra-conserved element locus uce-4435"
BASE COUNT          292 a          208 c          219 g          305 t
ORIGIN      
        1 ttcttatcag aaaatcattc catgtcacag gaattcttca gatggcttaa ccttgtttgc
       61 tgcattttag gttctttttt gctaaattct aagtacaata aggcagtatt ttaatagctg
      121 aaacaaattg ctctgttaaa ccaagaagta atcacgcttt taaaagatgt gtattacaaa
      181 cattctacta cagcatgaag tttaaatatc tttggttttg agggaacagt tcaggaggca
      241 atcacggagg tttttgagat taatcttatt tgcatgtggt ctgcctcggg cattctgtct
      301 tgctcaagct gagcgggagc tgaggaaagc tgctcagacc gtagagtaaa gcggtgccgc
      361 cacaacctat acatcacacc ctacagcttt tatcaccggg ttatcagagg aaggtgtcac
      421 ctgttgtatg atttctaacc gccgctctat attctgtttt aatgtaaacc tcttaagcgt
      481 ttctcgcggc cagttacact gtgcgttctc atcaaggcta ctgttataaa tggcacgcgt
      541 gcatatttat gggaatgagt caaaggcatt tgtaagtcac atccttgcat cccaaatgaa
      601 ttctgcataa acagcacaac gggttataac tacggacgac actcgagtga gtaaaagcag
      661 cattaggtct ttattggttg aaacaggtat ggtttaggag agcaaattaa acttttatat
      721 cactgtaatg tacctcccaa tatgtcgagg tacagatgtg agatttctgt ctccataaat
      781 tggattcgtg gtacagggaa ggtcgttgga agcctcgtgc tgacaagcag caaaacttta
      841 ctggcccgtg aacagcttcc tttggttcca acttctcggt gtgaaactct tacgtcactt
      901 ccttgacaac caagcagtaa tagtgttatg cctggtaaaa aggaatagag tcatatctcc
      961 tgcttgagga agaggaaggc aagccttaca tgccataggg tacacctaaa accccaaaac
     1021 ttgt
//
LOCUS       KCKM01002990             723 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46898apa ultra-conserved element locus
            uce-460, sequence.
ACCESSION   KCKM01002990
VERSION     KCKM01002990.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 723)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 723)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..723
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46898apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>723
                     /note="ultra-conserved element locus uce-460"
BASE COUNT          241 a          124 c          112 g          246 t
ORIGIN      
        1 ttttcatcag tatctttaat caggtttcaa gacactataa aaacatgaca aaaatcataa
       61 aaattccttt tgtctcaaac acatacctta gaagcaaggg atgtatccct aaatatttcc
      121 tcaggaaaaa ttaatgaagc aaattaaaag aaaaattctt tcaagctgtt ccagacaaac
      181 tcattttaca gccttttatc atgcttcctt gccgtttggg aaatttattt aagttattaa
      241 aaaattccct aaaattctca gctgaaaagt tggcttctgt tttttctaca aagctaactc
      301 acctgatttg tcagaacagc tcgaaaatga agtgctaact ggtgggtttt attgaaagga
      361 aaccaagtgg aacaacatat gtattttctt aggaaactaa aaagctcaca gtcctgtggt
      421 gttccttggg gtaaattctt tgttatgaat tacaacctgc ttactgatga gttgttaata
      481 aaaagtagac ctgctgggcc attatttttt tccacacagt atacccagtt tagctttttt
      541 ttaacgtttt cattaatgca ctgagtgtga ataaatctgt ttccaatttg taattgtttt
      601 cccttcatct ggacattaat ttattgccaa atctaacact cttctatttt taatatccct
      661 ccaaactgaa gagctgtttt aaaaagaaag aaagagatta gaagaatgca ggatagtgga
      721 aag
//
LOCUS       KCKM01002991             922 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46913apa ultra-conserved element locus
            uce-3099, sequence.
ACCESSION   KCKM01002991
VERSION     KCKM01002991.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 922)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 922)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..922
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46913apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>922
                     /note="ultra-conserved element locus uce-3099"
BASE COUNT          216 a          203 c          238 g          265 t
ORIGIN      
        1 cgggcttctg gatgtgtcat cagaggccaa aacatgactg agacagtgtg actggatcat
       61 cccagcacaa gtttaagacc tacttaaagg tgcctgtgct gtatcccttt tgaggatagg
      121 tggaatttca ccctttgtat ctggaatttt tcaggggtat tgagattgta gagagcaaaa
      181 gtgtcttcca cagattcatt tgagtcttag caaatatttc agctctccta aattaggctg
      241 agctcttgcc aatccatgcc cagaaccaga ggctgcaata agcatatgta aacaaggtgt
      301 ctcagtgtgt tacctgtcag tccctatatc tccatgctag cctcaggaga ctggcgagga
      361 gagagagaga gctagtttga ccttgctttt taggccctgt tgttgtttgt tttggtttgt
      421 tttttaccct cttcccacgt gcctctaatt gatcttgaaa agaaaaagaa gacgttaagg
      481 tgaaatgaag ccataactgt gactggagac ttttattaag tgtggcaaag ttccctgggc
      541 tgcgtagaaa ttgtttattg attttggtat ggctgggtgc tccggagtaa tcgcccgcag
      601 aactgctaga gagagacaga gaggagagtg ctttgccagg tctctgctgc ctcctgcccc
      661 tggctgctct tcctcctgcc catgctggtg gtctcctctt taacctgtaa atgagcagcc
      721 aaagctggat aagtcttgct gcagccagct cctgcagccc ggctctgggc tctgccctgc
      781 tgctccagaa gtgactggtg aaggaatatg gaaggaagga gatgactttg gagcatgtat
      841 catacaagtg agcacggtac tgttgagatc tgccctttgg ctcttccacc tgtgggttgt
      901 tacagacaga aacctgcctg tg
//
LOCUS       KCKM01002992             807 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46928apa ultra-conserved element locus
            uce-3573, sequence.
ACCESSION   KCKM01002992
VERSION     KCKM01002992.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 807)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 807)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..807
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46928apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>807
                     /note="ultra-conserved element locus uce-3573"
BASE COUNT          278 a          134 c          127 g          268 t
ORIGIN      
        1 ccttcctccc tcccccaccc cctaaaacaa tctgaataat gaatcaaatg gtctcaggag
       61 taattggatc tttttctgtg taattagcaa tttttcccct tgcattataa tttaaagtac
      121 tgtggttgaa ttgagcaact catgtaatga gtcattagac tgaggctttt aaggaagtta
      181 tttctgaagg tctgtggagg ctaaaatatg tctaaattaa aagaatgaca ggctgcaatc
      241 acggctgtaa aataaaggtg ctcagtaagc agtcctatta caatcagaag gaaaaagaag
      301 cagatctctg tcctgtgtat agaagcagag gaaatgatga ataccttagg taactcactc
      361 tgtgcaaaat caatctttca ctgtcaattt taaatgaact aatttgttca caaatctgct
      421 cagtcagttt ggaagcatac tcagttcatc catattagca aatcctttaa tcttgactag
      481 tccactgagt aagaaatcta gaaatgtgtt aatatgactg gacatatgta gtaggataag
      541 aattgattct tttaattagt gtctattcaa gttatagttc cttcttttac tgaactattg
      601 acccactgat atataaagag attactgtta tgactgaaaa accttccaaa gttatattta
      661 actctttctt tattgatcaa tgtcagatag aaaaataatc tttgaattat ctaaaaataa
      721 acaatgtaat ctaatttaag atttctttca gacatattcc cattaattct ggagattcag
      781 actaatattc aaaatttaaa aagcata
//
LOCUS       KCKM01002993             731 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46944apa ultra-conserved element locus
            uce-6478, sequence.
ACCESSION   KCKM01002993
VERSION     KCKM01002993.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 731)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 731)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..731
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46944apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>731
                     /note="ultra-conserved element locus uce-6478"
BASE COUNT          187 a          181 c          146 g          217 t
ORIGIN      
        1 cttttagcta gtgaatcata gaggatgtct cacatttcat tagtgtttca gtccttaact
       61 cctcatattt ctcaggttct tttccccttt gcacaatgta tgcaaggaca agaatgtgta
      121 agtgtcacag ctaccccatt cagactttca ctgaactggt gtaattggat tttgcacctc
      181 aatttgcaag atacagttcc cctgaaagcc aacccatttt tggtgagcat aaaaataaaa
      241 tgaaataaaa ataataataa agacagggca ggcattcata aggtaccagg tctccacagt
      301 cttcagctaa gagaccccag atttcaatgt accctgaaaa gggtgattaa tttaaagtga
      361 gtggagtctg tttctttaag acaagctcat aaatcgtgaa agatcaccac ttcttttcaa
      421 aaggctctcc acggtctgag tttcccttct gggtcagtaa aggcattgaa gttttaatgg
      481 catgccatgg cagattacac gatacagctg tcccggcacc gtgaaaatta agttatgccc
      541 cgtgtcagca aggttttttt cccttttctt tccctaccct cccccttcac tctccctctt
      601 tctttctctc tccctgtccc cttcttcatt ctcctttctg ctgggaagtg cgcatccgag
      661 gaggaggcgg gagcccggcg ggagctgctg ccacggctgc tgttgagccc cagctattga
      721 gaccgagtaa a
//
LOCUS       KCKM01002994            1068 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46960apa ultra-conserved element locus
            uce-2177, sequence.
ACCESSION   KCKM01002994
VERSION     KCKM01002994.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1068)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1068)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46960apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1068
                     /note="ultra-conserved element locus uce-2177"
BASE COUNT          368 a          229 c          179 g          292 t
ORIGIN      
        1 actggacaca ttttagtcag ttcacagtat aataaatatt tttactaatc tgttttggaa
       61 gagcaaatgt cttctagggt ttcaagctcc tctataagtt tctggttctg aacttctagc
      121 actgcaacac gattctccag actttgtatg tattctttct tccgacgtcg ggatttttta
      181 gcagcttccc tgcaaaaagc agaagtaaaa agtgcaaaca aaaaagccat ttgcatgcca
      241 ttagaaagct cagcagaata tggagactat gacagaattc caagttttgg aatatctccc
      301 aaatcagtct gaaaacacta agcaaaactg ggttccacaa gggcctcaag tgtctctttc
      361 tcaagttcgt atggcaatct gtagaattgc ttcctctcac gccttgatta aagttcataa
      421 caaaggaggt ccaaatgaaa gacagttact ctgctttatg acaataaaga tctttaaggg
      481 ccttgagttc ctcaatgaga gtcttgtttt ggttttcaag cacagccaca cgattttcaa
      541 gacatttgac atattctttc ttctttctgc gacattctct ggcagcttcc ctggaaccaa
      601 tacaaggcaa atgactacag gaacagccac aatatggcaa agactggata aatgaaatta
      661 cctgcaatcc ctgcagttcc acaataacaa caacaaccac catcaccaac aactgttgga
      721 ttgtacaaac agaacagcag ataacagcca taagcagtaa catggttaaa acacaattca
      781 aaacagctag aattggaaag aaattcagca tcaacaaata accgacagaa ttaatgcaca
      841 gaagaactga gaaaaacagt gagacaacaa catattgact tgaattgtac taaacattta
      901 gactgagagc agcatttctt cctccagtca cattccattt tatgtgtttg ttgggagtat
      961 tatctcctgc aatccaagtt gtaaaaccaa acccaaagaa tttactttca gaaaatacaa
     1021 gcacaacact gctctctttg gataaaaagc tagatgccaa gcttacaa
//
LOCUS       KCKM01002995             767 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46976apa ultra-conserved element locus
            uce-767, sequence.
ACCESSION   KCKM01002995
VERSION     KCKM01002995.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 767)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 767)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..767
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46976apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>767
                     /note="ultra-conserved element locus uce-767"
BASE COUNT          250 a          164 c          143 g          210 t
ORIGIN      
        1 ttatcgaggc gacacatatt taagcccata catacatgtc gggcacacac acacagatac
       61 attaacccgc tgtctttgtg gtgcagcgtg tgtctgccag cacatactca aggaaggaca
      121 cgtaggaagg cagcgtgcgg ataaaatcag tgcttccagc ccctttgcaa aaatctgtgt
      181 ccttccgaaa atgacaagtg agatgaatat taaaatatat atgtatgtat gtataccaca
      241 cacagacaca ggcgatgtaa catttcctgc taattctagc tgtataaata gtgctgccga
      301 gtacaaaaac ttccatcccc ttggctacag atatgcgctg aagattatta ttagtttgta
      361 ttaatagatg caggcctcaa aagacgaaat cagctattga taattgcaag aagtatacag
      421 cagctactgt atcgatcggc ttgtccctta ttcccctggt ataggagaga taagaagaca
      481 cactctttag tgcaatataa tttcttttga cctatctgct tgctacagac ttatgatgaa
      541 tagccggagt ggttaaagtc ctttatcacg aaagttaccc cttgatataa tattgattct
      601 ttataactag ctccaaacac aaaaatcaaa ctgtccactt gaccatcatc atcatcaata
      661 tcatcacaaa ggctccggaa taaagatcag cacaggactg aaaacgcttt ctataatctg
      721 cccacctaat ctttatttgc tgatgatgaa aagaaaagga gtaaggg
//
LOCUS       KCKM01002996             709 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 46992apa ultra-conserved element locus
            uce-3512, sequence.
ACCESSION   KCKM01002996
VERSION     KCKM01002996.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 709)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 709)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46992apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>709
                     /note="ultra-conserved element locus uce-3512"
BASE COUNT          211 a          142 c          108 g          248 t
ORIGIN      
        1 agtttcttag cacttctcag agctgtgaag agagcctaac gcttggggct tggctgcata
       61 tacctttaag tatttctaat tgaaagccac aaagcgttgt tttctcttgg agaatcagtt
      121 cccgctttgg atttaggaaa gaatgcgcca ctgagataat ctcacttttc ccatcatcat
      181 cctttcattc ttcttcactt cttcccctcc ccaggcacaa ggtgacatat ccaagcactt
      241 gtccttcaac agattcttca gcaggcaaca gagcagaaag ccctaatatc tattcatttg
      301 taatctgtca ttcttaaagt attaaggaca attgacttca catgtctcag gtaattagaa
      361 tagtcatcct ttgctccaga tttttaaagt aagtgtctca aactcttaat cagtacattt
      421 attgatgtct ttcaacatat ctgtttcttg tcaagtgcgt gttagatttg aaaaaaatct
      481 tgcatactga attgtgcata agaattatat taaaaccctt tttctattgc ttttgtaatc
      541 aaataaagta tattagtgac aacgtggtat tttccacatt cggagtaatc aatctctttt
      601 tttaatatgg aaaactgctc gaaagcaaat taataaatat aaatgtcagg agctacattt
      661 acacaaatgt tttagtactt gctttcccaa gtttatattt ccacatcaa
//
LOCUS       KCKM01002997             842 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47022apa ultra-conserved element locus
            uce-7799, sequence.
ACCESSION   KCKM01002997
VERSION     KCKM01002997.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 842)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 842)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..842
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47022apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>842
                     /note="ultra-conserved element locus uce-7799"
BASE COUNT          202 a          177 c          208 g          255 t
ORIGIN      
        1 gaacagcagc ttcctccgcc gcgtacgccg gtgttccgtg tccgagtcag tcttgccgtg
       61 gctttcggtg ccagtgtgcg tgccagtgtt gctcgaagca ttccgtattt aatcgcgctg
      121 ctttacacga ggctgaaaat acccagagct ttctcgtact ttatatttct gtctgagaag
      181 taaggaagag aagacaaatc aaccctttat gggtttagtt gttgcctttt aactacttag
      241 tagctgtatt taatagctag gaacccctgg ttaaactcgt gctcacgttg cccttctggc
      301 atagtcctat taaatccatg tgaagccggg tctgattgtg tgcagctgtg gtgtgcttca
      361 ctccgtggga cggggccaaa gactttagat gtggtgtttc ccatggtgac ttacattatg
      421 aatggatgta ctatgcgaaa gttgctgctc cttatttatt gcggtgtgct gcatggaaca
      481 tatttatttg aaagcattaa aataaacgat cccgaagcat gtgcataacg agagaactgc
      541 attgtctgtg tgctgctgta gcggtgaccc taaagtccac ataacaatta cagaacatca
      601 gttgggctta agatgcaaga gctataaaga ctggcttgag tggatggaat gagttgcttt
      661 tttttttaag atgcctatta tttctaggcc cttcagctat atttcagata cagtcggtca
      721 ccgatactta acactaacag tctgacaaag gggttgtggg tcctgagtat gacactagtg
      781 ttgccaataa aatggatgga gcccgttcag tcgcagtgtg gttaatcctc ctggccagcc
      841 gt
//
LOCUS       KCKM01002998             936 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47037apa ultra-conserved element locus
            uce-2592, sequence.
ACCESSION   KCKM01002998
VERSION     KCKM01002998.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 936)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 936)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..936
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47037apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>936
                     /note="ultra-conserved element locus uce-2592"
BASE COUNT          270 a          184 c          200 g          282 t
ORIGIN      
        1 ctgaaattac tcttaattta cgatgccatt aactgtgaat tatttctatt gacttttgat
       61 tcaaagtggc tgaataaagg cagtatttta atgaaatata tggatatcca aaatgtgttg
      121 catacctgat gccaataata tattggttat agatttgata agctggaact gcagcatatg
      181 cttttcagag tggtggtgat ggtcagtatt ttgcagaact gtcacaacca ctgctttatg
      241 tgtttttgtc tcccaggctt catggcatca aacatgcatg gactttaaaa cgcagacttt
      301 taagtaactg cttaacagaa aagctggaaa attcagccta gggtatactt cccttccatg
      361 cgtttggcac ctttttcaga taagttacag aattccatta tccaaattgt tacacatgtg
      421 tgacagaggt tgacctttag tcatgtcaat cctttttgtg taggcctcgg gctccagcct
      481 aatggctcaa agcctgattt actcactgta ataagggcag gaggtcgagc aattgtcagc
      541 ttgcctgctc gtactcgtct cagagcctgg ttgaaggctg ttaacacaaa gcttttcaaa
      601 gtgaatttac aaccaccacc actgacagag gccaatcagt acaccataaa tgtcaggtta
      661 gtgagattga gcagtaagta aagtactggc agcccactat tggctgaaat caattgctca
      721 aggtttaact gagagtagca atccatgtat aactatgtct gcagaaccga cttaagtgtg
      781 gagagcaagc tggagcgtgg attaggtgga gttacccacc agcaacagcc atggcatcaa
      841 gccctgcatt tttctccttc tatatgaatg gtgcctgcac tggtgtaatg aatgttgaaa
      901 aagtcattgg acctacctct tagttgtaga aataag
//
LOCUS       KCKM01002999             432 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47051apa ultra-conserved element locus
            uce-4061, sequence.
ACCESSION   KCKM01002999
VERSION     KCKM01002999.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 432)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 432)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47051apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>432
                     /note="ultra-conserved element locus uce-4061"
BASE COUNT           95 a           93 c           96 g          148 t
ORIGIN      
        1 attgttaatt taaccctcag caatcttaac gccgttgctg tctacagcct cggcagattt
       61 ttttttccaa accagctgtt gaaaataacc tagtttaaag agttcacggc tgaacgtgag
      121 ggattcatca ttatatattt actgtctgag gctgatatag ctgtaaggtt tttcagatgc
      181 cattgatcta ttgcgcatgt tccctccccg ggttgcagga cgtgcttcta tttgcataag
      241 gccctgggca aggttctttc ttgcattgat tggcctgtcc aagggagcct gatgtgctcc
      301 tgcattgatc accctgtctt ttcttggaag gcagtgttat gccgagttca tctcaaacat
      361 tctagggaga aggggaaact ttactgcaga tgtctccatt ttattcagat gttcctttga
      421 gtattggcct tt
//
LOCUS       KCKM01003000             331 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47067apa ultra-conserved element locus
            uce-7015, sequence.
ACCESSION   KCKM01003000
VERSION     KCKM01003000.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 331)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 331)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47067apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>331
                     /note="ultra-conserved element locus uce-7015"
BASE COUNT          126 a           45 c           58 g          102 t
ORIGIN      
        1 aataagtaga aacattaaaa aaataaattg gattaggaaa cagatgaata taatgacctt
       61 ccttactctc aatcatatgc tgccagataa gtgtttgagt ctgaaaaatt gcactaatga
      121 agctatttga aggcttttgt ggacaactgc ttcctctttg aagattaaat gaatgatgtt
      181 gatgtgatta atcttagtac agggagtgat gcagcagcca gaaaatacct tggtgatttt
      241 cataattaaa ctgaatcaac atttcaaaga aatgccagtg ttatcacttg tatattagaa
      301 ttacattcat tagacagaag aaacaaataa t
//
LOCUS       KCKM01003001             702 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47081apa ultra-conserved element locus
            uce-3852, sequence.
ACCESSION   KCKM01003001
VERSION     KCKM01003001.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 702)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 702)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47081apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>702
                     /note="ultra-conserved element locus uce-3852"
BASE COUNT          212 a          142 c          190 g          158 t
ORIGIN      
        1 atgatctgtc aatacctaca cgtcaagaat aatagttcag aatgtagctg tgggatttaa
       61 gctgtttaaa aagacaaaag taaagctgaa atgaaataat aataataata atggaggggg
      121 aaggttttga ataccaaaaa agtcaaaacg tttcagaatc cgagtcgttt tcattgtacc
      181 catcctctgt tcctacgtta ttactcaagg gcttattgta agagctaacg ctgcccgtgc
      241 tggagccatc gcagaggtgt gtcctgcccg aattgtcttt tttaaaacaa gcgaagttga
      301 aagccgtcac tgaactggaa ggagaaaaag gcatcatggt agccaaaatg agtgccaggc
      361 agtcagccac gtctttgtta ggagcgcaag ccagggcggg cgtatgacct gggcacaaac
      421 gcagacaagg caacggttag tacggagggc agggagcccg gtgcccagca ttcctcagat
      481 acatctctag gggacgtggg gagcgggaga gggatgttca gcggtggtca tgccaggcaa
      541 cggggggacg gggcttcttt gaaattagac atgctgggaa aatacacact ttatggagcg
      601 tttaaatcac cgggaccaca acaagcacta ttttttttaa accgggcggc aaacaggctt
      661 catggtatga atacaagcag tggctaaaca cggtcctaca gc
//
LOCUS       KCKM01003002            1035 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47097apa ultra-conserved element locus
            uce-2035, sequence.
ACCESSION   KCKM01003002
VERSION     KCKM01003002.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1035)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1035)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47097apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1035
                     /note="ultra-conserved element locus uce-2035"
BASE COUNT          295 a          273 c          200 g          267 t
ORIGIN      
        1 agttgtcacg cgacgagcag cgagcccacc ctggcatcag gatcatgaga taacaagtgt
       61 cccctgcggg gattgctgct cccaggtttg ccgggcccag ccgcttgcaa aagaagtgag
      121 agatccccag aaagctgctg gcattgccca cctgtgagca cctccaaagg aaggccacct
      181 aaggctcacc ttaaaggcac aaaatgccct gcacatgaca catcaacacg cacaccccca
      241 agccagagga tgactctcat catcttgcca gtggtcaaga acagtaaaat aaaagcattt
      301 tccagacttc tgtgctgttt ttaagcacca aaggctggaa atcaatgtta aggaatcacc
      361 atgcctgcta gaaacacagc atcaccagaa tttggggagc aggaaaagaa ccaaagcaat
      421 gaagtccctc tttcccctcc ccagcttcct gctaccccat gaatgaaaag ggaagagaga
      481 agagttgtca ggtaatatca acatcagatg ccacaggcag tcatcagatt ttctttcagc
      541 tgcttaccag tgtggctcct tttatgtacc attagcacat tgggcccaat gcaaaccatg
      601 ccacagacgt cacatttcag tttaccattc ggaagccgga ttcctccctc gctcgatagc
      661 tcctggatct ttctgttatc cgtcatctcg ttattctcag tgaggggctc ttccaggctg
      721 cttccttcat catgagccct gatctcatct tcctgactca agggcttcct gtcacattcc
      781 tcatcacttt gcatttctag ctttactgaa tttgctgaaa taaaaattaa aataaaaaaa
      841 attaaaaact tatattttct aagttcccaa tcattcatat aatgataaat tttgaatgtt
      901 atcaatatca aagcacagcc ttgaaggtca aaccaacatg agagcctgtg gtggtgatgg
      961 caccacaagt tacaactgca tgtttcctca aggccttgtt tgattcctaa ttcctatccc
     1021 tattttacag cttag
//
LOCUS       KCKM01003003             852 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47113apa ultra-conserved element locus
            uce-7599, sequence.
ACCESSION   KCKM01003003
VERSION     KCKM01003003.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 852)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 852)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..852
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47113apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>852
                     /note="ultra-conserved element locus uce-7599"
BASE COUNT          261 a          154 c          146 g          291 t
ORIGIN      
        1 tacgcacagg aatgtttctg tagaacgact gtttcttttt tatcccgcac gtcctaaacg
       61 tgtattcatg tatatatgag aaggacatta ttatcaacca aactgcgctt tgttgacaac
      121 actctcaaat ataaattgga gaaatgtttc ataagccgta gtcaaagcag tctgactatg
      181 agacctaact catgacatgt gtcagcttcg gaaagatagt gtattttgtg tttttaaaga
      241 ctcaaacaaa acttttcaca ttcttctatg aaaaaaattg catttgaagt cctttttcac
      301 ccaaacacat ttttagataa gagcacacaa gtcttgacat tatttcattt tgttatgcgc
      361 atctgtcaag gaacagagat atgatacagc tactaaaaac tgatgattgt ggaacagtga
      421 aacttgacag catttcattt cctttatgtt ctgattatac atttatcggg aaacctgtat
      481 ctcttctagt tgagctagaa attggtagaa ttcaggaact caaaggcttg gcaaagaact
      541 gtcctattat ttggtatcat cttacatttt agagaagttg cttggttgag tcattgttaa
      601 agcttttgct tcttctttca ttattgtggt tcactatcca gagatcacat ttctataggc
      661 cctataactg ctctgcagca caaattaaac gctgggatat ttcatacata tacctcgaag
      721 tttcaatggt tgtcaatcat agtttgtaaa atatagggat tacaacctga tattaacatc
      781 caaatccatt gtgttcgttt tatgtgtgaa aatgagaaac ccttgtgcag acgcaagatt
      841 tcacagctct tt
//
LOCUS       KCKM01003004             885 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47129apa ultra-conserved element locus
            uce-1961, sequence.
ACCESSION   KCKM01003004
VERSION     KCKM01003004.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 885)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 885)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..885
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47129apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>885
                     /note="ultra-conserved element locus uce-1961"
BASE COUNT          305 a          144 c          158 g          278 t
ORIGIN      
        1 ttaatcaaaa cggagaaata taaatctatg tagaattctt ctgtgctgac ggagaattaa
       61 gtagaaggta tattcataat taagcttttg ttttcaggca gcagttagac ttacgcaaga
      121 gctctatcaa agtaggtaac tatgtctcaa atacaaaaat ctgtttcatc atttatagtt
      181 tttatcacat catatagcat aactttcaca tgagaacaaa ggtaatttta aagcaaactg
      241 ttgttctaag gtaactttta atttgagtac caaatgtaaa ttgctatggt gaatgcacat
      301 taggtcacta aaacaacggt agctaaactc agatgtgacc tagcaaccca ggtgttcagg
      361 aaaagtgctg ttaacagtaa ggattgatga tctaatcaaa ctgtcacact cagatcctca
      421 gcagggtggt tggaggggag gtggaggagg ataatattca gaaagcaagc acatgcttag
      481 tgttacttta aattgatgct gacattttca attgtaaaaa gaaatttttt cctaagtaat
      541 ataggaaaca actctcctaa ccttccggag gatatcagat aatcagagag cttgttttgc
      601 aaaagccaac ttctcagatg tgtgacttta tgaaatacaa actatcagac attttagaaa
      661 ttcaagatga tagcaaaaat tttaatgctt ttctttaggt atatatacac ctaagtgtgc
      721 acatatatat acgcacacac acacaattgg ttatttagct aaatctgtgc atatgcactt
      781 gctatgtata taccataaag ctaaataatt aataaaccaa ggtatttgtg ttagtacttc
      841 tatgcattct gccctcatgt tgtctcttga ctatgccact aggga
//
LOCUS       KCKM01003005             907 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47145apa ultra-conserved element locus
            uce-6241, sequence.
ACCESSION   KCKM01003005
VERSION     KCKM01003005.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 907)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 907)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..907
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47145apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>907
                     /note="ultra-conserved element locus uce-6241"
BASE COUNT          289 a          162 c          140 g          316 t
ORIGIN      
        1 cggtgttggt tgctctcatt gaagtttata atgctttaga tattcaaatc agctttatgc
       61 cttccatttg ttatgcaaat ttgcaaactt tatatatcac atggtttatc tacattaata
      121 cagctttcac taacaggact tacaggaata gatgtacact ctaaagatgc acatttttag
      181 taccttgaat tatcataaaa acgtaaaaat agtgtgtatt gctctactct aatcagactc
      241 atttttatgt ggttgttgaa agccctttta cattccattc tgtgtctgga ggtctgtgta
      301 taaaactgat tcagaaaaaa ccaaagtgaa gacacctgct ggcttataac acaaatacta
      361 aaatatctta gagcctgctg aaaggagaat tggaacaata tgtcattact gaaggctcac
      421 ttgcaagttc taatgtatta taatgaaaac agtatgacaa acctaatgag acagtgaaga
      481 tttgggtaat tgttcctaga atgtatggta acttttccag ccgttattgg caaacataaa
      541 acctaatgag attttattaa tttaaatgca gtacatctgc aaaacatttc cttagttgca
      601 gtctcctctg ataatcttcc ttcccacatg tacttgatcc ttttaagtta attgttctgc
      661 atagtatact ttctaaacaa aacatacaaa acaccataaa tgtgcatcaa ctcattttgc
      721 caggcttaat ttttgtgggt acacttttgt actagttaga tagactaaat cttctttcct
      781 ctctgtgaaa atgtgtataa tgaaacttgt atttttactc agaatttgat taaggcagta
      841 tcttcacaca gagcctaact ttgtcaccat tcttcatgtt attcttccag gaatcctatg
      901 gaagcaa
//
LOCUS       KCKM01003006             734 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47160apa ultra-conserved element locus
            uce-3371, sequence.
ACCESSION   KCKM01003006
VERSION     KCKM01003006.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 734)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 734)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..734
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47160apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>734
                     /note="ultra-conserved element locus uce-3371"
BASE COUNT          167 a          195 c          159 g          213 t
ORIGIN      
        1 ctgcgtgttt gcactacaca ccgacagaat ttgaggcttc cccaaaaggt ttaataagag
       61 ttgcaaactg agtttgggga gtgtttccag gtttgttctt acacagcaag atgtcctgct
      121 gttaaagaac ggggttcagt tgtacttctg gaagcactca gcatctccag atgtctaaaa
      181 ttgcaagaaa cattttctag gtaaaaacag ctactttttt gagcggcgga gagtccataa
      241 aactgcgtgg agcatcagct attaggggct cattgaataa ttcatccctc attgcaagcc
      301 cataatgtct tttctcagcc ttttgtgggg ctgttttctc ttcttttctc cttgaattat
      361 aaaaaggttg ccttcttttg ttcacatcaa gctgctgcta gctgaagctt tgtctacgca
      421 aagccaaagt gtgagtttca atggactccc ccctctttgt tttccaagtt catctccaag
      481 tgtagattgt gtatagaagg ccttctttgt aaaagctgga aaagttgtac aaatgtttga
      541 ccagctcatt tggtactttt gtctcgcctt ctccagcgcc tgggcatgtg ctcgggcaga
      601 cacttccacg ctcgagccgc cctgccgagc ccttcctgcc cctttgctcc cctccggccg
      661 gaaaaaaacg ggcaccacca caaacggggg caacggttgc ccccccatcc ctccccggag
      721 caccccttcg cctc
//
LOCUS       KCKM01003007             770 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47176apa ultra-conserved element locus
            uce-4106, sequence.
ACCESSION   KCKM01003007
VERSION     KCKM01003007.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 770)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 770)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..770
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47176apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>770
                     /note="ultra-conserved element locus uce-4106"
BASE COUNT          274 a          154 c          118 g          224 t
ORIGIN      
        1 gacactatag aacaaaaaaa tattacctta atggaagaaa gaaaagttta gggaaaggga
       61 gaaaaacata gcaggcacct tgcacatgaa acttttgtga aatcctgaat ttaaaggaaa
      121 taaaaatcaa tatctaccaa caaacgtacc tcatgtgata atcaattacc taatgtaaaa
      181 tgcttgaaat aaaagcactt agtatggatt atgtcagctc ttcaattagg agtaaattca
      241 cggccacttc agaaagcttc ttttaattgt gttcttagtg gcaactcctt ctcccctgac
      301 actcatcatc aacccacctt atactatcag tcccccaacg gtgaaactga gaaatcaatc
      361 tgctaatgta taatttgtaa agctcctctg actaacaaat ggataattga ttctttcacg
      421 aatgctgcat cccaatggat atgaagtgga tgaacaagaa gcataagact ggatttccct
      481 ccaattctgt gagaaatgca gtatttacaa gctaggaatc taaacatttt aatagctgcc
      541 tgtgacttca tgccttttag ccacggttag caggcaagaa acacacacat taggagtgtg
      601 aaaagcaaag cagtgttcaa tcatacttac agcaaagctc attttacttc aagaggtttc
      661 cattgctaat acaatcccct taagcagcct tttaatcctt tctttaaaaa gaattttcag
      721 aaatttttcc tacattaact caaatgtttt tatctacata catatatacc
//
LOCUS       KCKM01003008            1037 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47192apa ultra-conserved element locus
            uce-6208, sequence.
ACCESSION   KCKM01003008
VERSION     KCKM01003008.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1037)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1037)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1037
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47192apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1037
                     /note="ultra-conserved element locus uce-6208"
BASE COUNT          307 a          204 c          222 g          304 t
ORIGIN      
        1 aggaagactg ctttgagttg cttgtaagaa aacaaatata ggaatttgca acttctgtgc
       61 agttttagct ctgaagtaat tatggcaggc ttttgcttta atcacttatc tcagggcagt
      121 ccatcagata agcaagaaaa ataaaaaaaa aaaaaagaag tattaaaagt tagtgagtta
      181 ctggaatctt ctggaactga aaactctaca gatggtctgc aacatatttg tatagaagat
      241 gcccaattgt tgatgggttt ccaactatta tagtagcata gtaagaaggc agatactggg
      301 cagtgagcac tgagcaactg ttgtcacaga gccttcccct cttggctgca tccccacttg
      361 cccaacgagc agttttggtc tcccagagca gagacaaagg ttgctttgga gaagctgggg
      421 agcctaagaa caccatgtag atttaggact ggataggagg tattgtgcgg aggccatgcc
      481 cattactcat ccgctggcaa cgggctctct tccttttgtc tggaaagacg gtaaactttc
      541 aatgccatct gaaaacagaa ggcctttcag ggagtgcaag aactctgcca tctcaatcat
      601 gtgaaaatat tgtaaacact ttcccagccc ccattcagct gtccaaagct agaaaacacc
      661 aaacaaaaca ggaaggaaag aaaagggtgt gtgttgcgca cttcgtttta atttatattt
      721 tttactctga ataggaattc tgcttggaat tttctctttt tctccttgat gttagtgaat
      781 aggttaagta gctattatgg agaaaaggca gttaaaagcc tattctatgt tttctttaga
      841 ggcagaagaa agtccatatc ccagcagttt ttcttcagca gagcctctct catatttcct
      901 tacagtatct gcaagaatag atttcaaatg tcctgcagga cttggatttc tctttcagcg
      961 cttaggctga ctcactgctg tgaacttttt ccaggagggt ctcctcttca agcacttaaa
     1021 caacagtagt gttttat
//
LOCUS       KCKM01003009             791 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47207apa ultra-conserved element locus
            uce-3570, sequence.
ACCESSION   KCKM01003009
VERSION     KCKM01003009.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 791)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 791)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..791
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47207apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>791
                     /note="ultra-conserved element locus uce-3570"
BASE COUNT          260 a          150 c          128 g          253 t
ORIGIN      
        1 aaaagtatta ccacctttaa gctacacatt agaagaagaa cgtgacatgc atagttgtgc
       61 tttactatct gcaagtacca ttttccaaag cagaaacatt cacagatgca ccagcattag
      121 cggaaacttc tacaagtggt aaccctgagg tgggactcga tgtgcacaaa cgtttccaag
      181 ccagttaccc ctttgcatat ttttctgagg gggcatccat aagtataata aaaaacagaa
      241 gctcatactt acatcctatt ccatgttact ttccaagctg tgagtttcat cttgcattag
      301 tcaccatatg atctctatca taatggtggg ggtcaatgaa tagattagct ttatgggaat
      361 ttacagttct tccatgcatc taaagtttgg taagtctggt aaccactgac ctagttttaa
      421 tcttccccca ctcttaactt agaactatta aaataaaaga cttaaattta attcaagatt
      481 caattcatta taaaatcttg gattatgtta caaatctacc tacagaaaca cactcaagtg
      541 tatggtttat actgcagccc cgtttagcct ttagttataa atatctcgac ttaatgtatg
      601 tgtagaaact taagttgcct ttattcatgt taaagtgaga agactgcaaa atactcagta
      661 gcaaccaaag tcttagcata aagatgtcaa gggccacttt aacgtggtag ttgtcttttt
      721 ttgacttgta aagaactata tgtatattaa acctaatata aacataactt taagtgatat
      781 tgcaatgcac t
//
LOCUS       KCKM01003010            1030 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47222apa ultra-conserved element locus
            uce-261, sequence.
ACCESSION   KCKM01003010
VERSION     KCKM01003010.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1030)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1030)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1030
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47222apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1030
                     /note="ultra-conserved element locus uce-261"
BASE COUNT          366 a          226 c          173 g          265 t
ORIGIN      
        1 aaaaaacagt gcccatttag ctaccgacct gtaattgcaa gccattctgg gttgcatttc
       61 ttacgcatga aacaagaagc acatatataa ttactatgca gctggactag aaaacctgtg
      121 acatgaatac taaaaaaaag gaaagaaaaa aaaagaatac caggaatatt tctcctgcaa
      181 atgcaattgc atttttcata cattaacacc aacgtacaag aaaaaatgct cagaactaaa
      241 aaccaaatgc ttgagtttta cgccaattac tcctcttcta atcaaagtta aataaaaccg
      301 catcttcata actcctctgg ctaaaaagta aaagcattca gaaacctata aaagcagctt
      361 gcagttaata ttgcacactg tgtctaggtc tgtcacacaa aagaaagatg acaagttcac
      421 tgcaataaaa attccatgct tagaagacta gggctgctac ctattagtct tcattacttt
      481 gcagtcttct gacaactgta gcaggctgct gagccccaaa tgggggccat aatgtgatct
      541 gatgatatat gaagagctgc taaagggagc ctgaaccatc ctagcctata cattttaaca
      601 gttccttttt actgagagcc cactttacca caagacttca aaaatctgct gcctcagcta
      661 ttggtgcagt aaatctgcca actgtgcctg caaccacata attttacact gcctacagca
      721 gccaatataa tgagtcaata ataaaccaag gaccttatag gccgtgaata gctggtttat
      781 attggcagat gcaagcgtag ctaaaacctc tgaccagaca aacaacacaa aggactcttt
      841 taacagttcc tacgcttcct tgcagttaat tatcttagcg catatttaat gcattttcta
      901 aaaataaagc aattattaac tgcaaaaaac agtgtaccca cccttcagtt gctgatacaa
      961 cgcagcattt tcaggccaag gctctgcggc tgtggaaaga agaggaatga attaagcaag
     1021 ccaaacaaca
//
LOCUS       KCKM01003011             925 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47237apa ultra-conserved element locus
            uce-4693, sequence.
ACCESSION   KCKM01003011
VERSION     KCKM01003011.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 925)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 925)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..925
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47237apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>925
                     /note="ultra-conserved element locus uce-4693"
BASE COUNT          195 a          208 c          262 g          260 t
ORIGIN      
        1 gcttgcggaa ctgtggctgt ttgaaattaa acgtgatgct gactgtacca gctggggtct
       61 gtaatgtatc cgatagatga agctcttccc gtcggtttca ggtcatgcaa ggaaaagggc
      121 aaagctgggg agggagctgg gcggggtttc ccttcgcttt tcacagccgg gcgagaggag
      181 cctggttgat gtctgcagca gataaaggag accagaggat catcaaaaga ccccagagcc
      241 ctttcatctt gcggctggct ttccctctca tttcgtttat cgccgctgcc ttgcctctct
      301 gctcggttcg ccccctcgga aggggtcggc tgcaccaggg ccctggctga ggtagtagtt
      361 tgtgctgttg gtcgggttgt gacattgccc gctgtggaga taactgcgca agctactgcc
      421 ttgctagtgc tggtgatgat cagctgcaga ggaagataat gacaacggga atcccctttg
      481 ttttccccgg gattgcacgc tgctgaggtg gcaacgattc cttctcctgc tacttctgca
      541 gaaggagtct aaccctggcc gcccagagga gccgtggggc ttcgagcccg tcggcaggat
      601 gatgctgctc tcgctgagct ggatggagca actttcacac tgtttggaag gcacctaaat
      661 ttgggctgaa gagcaagagc ctgcatttct tctcgtgctt agaccttatt attcacatgg
      721 cacccttgaa agaggtggat tttctgttct gtgaagatgg agatcagtga tggacttgtt
      781 ttttctgtgc tcggaatagg cagagcttct atgtgtgata ctaagtgctt ttgtttgaat
      841 ggtgaaaaat cctgaatctt tacctaagaa aagtgaaaat atgcaattac tgctttcctt
      901 atgttgataa gatagtcttt ttaca
//
LOCUS       KCKM01003012             854 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47253apa ultra-conserved element locus
            uce-6937, sequence.
ACCESSION   KCKM01003012
VERSION     KCKM01003012.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 854)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 854)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..854
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47253apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>854
                     /note="ultra-conserved element locus uce-6937"
BASE COUNT          292 a          164 c          164 g          234 t
ORIGIN      
        1 tctaaataca aaatatatgc attatcacat agatttgaca cgtgcaagtg tacctatgtg
       61 aatacacata catccacaaa gctggcaggt tagaaacaga gaactatctg gagtatgtct
      121 tttttgtcta aatcattgac aaacctcctt aagaagtagc cagtaaggca agtaagctaa
      181 tcagtccact gctagtatta agtctaaaac aatctccagc tgaaatgtga ttaatccatg
      241 catgacagct taaaggtcaa agctagaatg cagagcttct tgactgcaaa gaaagaactg
      301 acttattttt atctcttctt taaaaattac agcagccatg aagtggctca aggagcagag
      361 taatgaacgt cataaacctg cctcataaaa atggcattca tgcagtaata cagcaggtca
      421 gatgagcagg gaacatttca ttaaaaattc cccttcttgc ctacccaaga gagacttaaa
      481 actaatcata taaaatggct gagtgacacc attaacgagc attaatattt taaagcttta
      541 atagtacaac agagctaggc tgttatatca aaattataca accttattag acagtgcact
      601 tggctgcatt gtacttgaac tgccagtacc cctgattgga aatattaagg tggccatgaa
      661 ccagagtaca aatacctcgg ctgctgtctg tccgtatttc gaaggtttgg cagtttcctg
      721 acatgtgggc aattttgtga ggaacaagat ttacctcacc cataccaaag gagggagacc
      781 ttcactgtga gaaacaggag aggttgctct cagaaagcta ttaattttca aagatgataa
      841 ttaggattca ggtt
//
LOCUS       KCKM01003013            1113 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47269apa ultra-conserved element locus
            uce-7529, sequence.
ACCESSION   KCKM01003013
VERSION     KCKM01003013.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1113)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1113)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1113
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47269apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1113
                     /note="ultra-conserved element locus uce-7529"
BASE COUNT          332 a          233 c          220 g          328 t
ORIGIN      
        1 ctaacagaaa tgttaaaagt gacatgaagg aaagcaaata atccaactat tgtttcaagt
       61 gttcttttta aagatttgaa tgcaaagccc ccctgaaggt ctcatccagt agtactaata
      121 atgatctttc tataatgttt taaattgcta aagttcttgt gtaaacacta attaattcaa
      181 ataatgctca caacttttag atgttaatat gaaccttgca aaagtaagtc aatttgcgtg
      241 tgtgtgtgct catgaggcta catcccctcc atgtattcac atgcacagac catacagtca
      301 tttgtcagtc tctaataaga aacagaagtg acatctgtca tgcatcccgg taaacacatt
      361 aagcaaacac aataggaccc caaaatgttt actcaactac tctaattaat tgtgacttgc
      421 tgtaacagag ttttctatga attaaacaga aagatccatg ctcactcctc cccctcctgt
      481 agctttctgt gcagtgggaa aagatttaaa ctaaagactt cccttctggc cctgccaagg
      541 tgcatttttt cctcatagac ttgacttgcc gtagaagttg atgtgagagt ttgtcatggc
      601 tgttttgaca gtccggtcat cctaatccag ggatctggtc cctgtggttt gtcaattatc
      661 ctactaaccc tacagcgaga ggaacactca aggcactgaa ctgtcatcca ataaccaaga
      721 aataatgtca gcagccagtg agcagggatt gtgagagatg gggatgcttt tgacaacaga
      781 gaagtgtgga tcatttcagc atttatttta tttataggca ttcgtaacaa attaattata
      841 tctcattgca aggcttcact aaaagttgct gggtccaacc tgcatgcaca cacggggcga
      901 tgagcagtcg agtgcagaga ttgctggcag atccaggcgt ggaggttcga ttcccagttc
      961 ctttcactcc cctcctgtga ccttgagctt gttacttgac ttggatatgt tttaatatcc
     1021 ccctggataa actgaggata aaagcatcca ctcgtaagag caggcggaga gccttaatca
     1081 attagtgcct gtaaaggaca ttaagatcat tta
//
LOCUS       KCKM01003014             472 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47284apa ultra-conserved element locus
            uce-2915, sequence.
ACCESSION   KCKM01003014
VERSION     KCKM01003014.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 472)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 472)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47284apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>472
                     /note="ultra-conserved element locus uce-2915"
BASE COUNT          162 a           80 c           65 g          165 t
ORIGIN      
        1 attatattaa tccatgatca tttaatttta ctttttgatt gaaatttttt aaaattacat
       61 gtatcttacg tttattcagt ttgctgatca atttaacctg tttgaacaca aacataacta
      121 ctgcagtttg aaacaaatat tttaaagccg atataaatga taaaatgaca acacagttaa
      181 gagtcttcag aagtgatggg ttcctgggtt gctactccgg aatacgtaca ctttcgtgcc
      241 tttgtctcca tcagcagttc tgacttcaag cagcagaata gaagcctaga aaattatctc
      301 tttaccatta gtaacacttt ggaaagatat ttatattcaa aacattacct tgtgtaagct
      361 gctaaatcct agttgttatc tgacaaaaca aataactatt gcatacctaa gtaatgttta
      421 aaacatttta tcataaagac ccatttataa gtttgacaaa tctggacatg tc
//
LOCUS       KCKM01003015             818 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47298apa ultra-conserved element locus
            uce-6663, sequence.
ACCESSION   KCKM01003015
VERSION     KCKM01003015.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 818)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 818)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..818
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47298apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>818
                     /note="ultra-conserved element locus uce-6663"
BASE COUNT          289 a          148 c          159 g          222 t
ORIGIN      
        1 cttagacaat aggatgggtt attacatatg aaacaagttt aaaaagaaaa aaaagtgatt
       61 gcctttaaaa gcagaaccaa acattcagtc tgtttcatat cagtcaatgt ctaactgagg
      121 ctttttaagg ttcatttttt taagtgatgt tgtaggcata atgaacttta aaaagcagta
      181 gaaagcaaag cagagtgcta gacttggaac tgagaattta aaatccttag ttaagaaaga
      241 gttaatggaa aatgaactac atatatcact ttgacaagaa tctacatgcc caatctgttc
      301 ttactgaact acaagcaaaa ggcatctggg ttttgtccac ttaaagcttt ttgcaaattg
      361 aaaggagttt ggagtgggtg ggagggcata attgaggtca ctgaacccat tccaagctgt
      421 gtcattgaaa tttcccagtg cttgtagtat gtagaagggt ggctgggcaa acacaggcaa
      481 gagaaagctg caatacttct gagcttttac aatagtgggc aatgactacg agataccact
      541 acattaaaaa aaaaaatctt cagcgtcatt atagaaaaaa caaaaaaccc tccctcattg
      601 ccattatttt ctgttactcg tgtgtgcaca tgcgcacacc atacacatac ccacacacac
      661 atacccacac agacatccat aaaataggta aaaggcaagt gaaatgatta acttccctct
      721 gatccagaga atagagtgga cgtaaggatg ccaatttagc acgtcagttt gaactgggca
      781 tttatctgaa aagtatttac ttcacagagc aagtcctt
//
LOCUS       KCKM01003016            1064 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47314apa ultra-conserved element locus
            uce-1908, sequence.
ACCESSION   KCKM01003016
VERSION     KCKM01003016.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1064)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1064)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1064
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47314apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1064
                     /note="ultra-conserved element locus uce-1908"
BASE COUNT          314 a          188 c          246 g          316 t
ORIGIN      
        1 ccactcagtg agagggcctt gctttgatta atgccaggag gtggaggggt tagaaggaag
       61 ggtcagcttc tgtgaggtgc caagtgtctt cttctgtggc ttaaatcacc aaaaaggaag
      121 gatcttcaag ctgggtgcaa gaattattgt agctggcagc atgcctccat agggactttc
      181 tgttgtctgg ggtgaggggg cagtagagtt ggaaaataag gtcagtaaga ccagcaaata
      241 ctgtgtaaag tgaagcccta atcggatttg catagaattt taaagaacac ggggagaaat
      301 ggtgcctcaa gggcctgcaa cttcagttcc tctgagcttc ctgttttaac tataaactta
      361 tcatcctata acctttctaa caaagacata aacacttcag ctacatatat tttgattgtt
      421 tcatgacagt ttactggagg cttagcaatg acagatttct tcattgtctt tttgccaaaa
      481 tttgtccttt aagtcatttt tgttgactgc cccttttagc agctcacctc acaatgagag
      541 aggagacaat taatgggagg gtgatttatc actgccaaaa actgtcaagg acttctgttg
      601 tagctggaga aaaagcaatt tcacattatg gcatttcatt ccgaatacat tgtatttaca
      661 gctcacagtt ttattttcag agcctattat caggtgaaac agttgcatct gaaatgttgt
      721 ttgtgacata ggtgacctgt taggatttga taagtattta cgccagagca caaggggctc
      781 acacatctgc tgttggcaga agcaatggaa aaaaataacc tggaaatgag gcgtttgatt
      841 tttctggttc ctacactcga gcatctgttg ctataattaa gtggcattca gtaattgcag
      901 agcaatggtg aaataaacat aagcattctt gccagctttt aggatttggt gtccttacag
      961 taggagagac aagcaaagtg acttcagcaa gaacaaaggg ttctgtaaca aagtttagca
     1021 attaactttc ctattgcata aagcggaatt ttacgaggaa agag
//
LOCUS       KCKM01003017             201 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47330apa ultra-conserved element locus
            uce-4414, sequence.
ACCESSION   KCKM01003017
VERSION     KCKM01003017.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 201)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 201)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47330apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>201
                     /note="ultra-conserved element locus uce-4414"
BASE COUNT           72 a           38 c           41 g           50 t
ORIGIN      
        1 aaaaagagga gagagagaga ggagaaagat ttcattacat tcagcacagt atgagactaa
       61 gtcaaagtag ttttgctaat taaattcaat tgccatccat tagaccaatg gaatgagatg
      121 aatctaccat atagctgaca cagcacaggt atgcaatttg gctaaatggc catttctgaa
      181 ctgcagcacg cctttctcca c
//
LOCUS       KCKM01003018             974 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47344apa ultra-conserved element locus
            uce-1123, sequence.
ACCESSION   KCKM01003018
VERSION     KCKM01003018.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 974)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 974)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..974
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47344apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>974
                     /note="ultra-conserved element locus uce-1123"
BASE COUNT          320 a          201 c          166 g          287 t
ORIGIN      
        1 agccttttac atttttaaaa taccaaagag aagcgaatca gatatttatg ctcaattgac
       61 aagtctttac atacagccag cgtctttgta aaatttatca taggaattca cccactagtt
      121 ttttttaaag tacacttaca ttttgtgata ctcagttgtg ctcaatattt agttctgtta
      181 tgtgcattat cctgctgaat gatcaaatta aatgcaaact agaatttgaa tgtctgcaaa
      241 cattggcaag aatctgcagc taattttaga tggaagattt gcagtgtctg ttgtttttcc
      301 tattcatttt agatgggtaa attgtaaaaa cattgaggaa tctgacctgc ttttttttcc
      361 cccctttttg tctaggtttg caaggcatgc caggggacta cgtatctcag ggtggtccta
      421 tgggtatgag tatggcacag ccaagttaca ctcctcccca gatgacccca caccctactc
      481 aattaagaca tggaccccca atccattcat atttgccaag tcacccccat cacccagcca
      541 tgatgatgca cggaggaccc cctacccacc ctggaatgac catgtcagca cagagcccca
      601 caatgttaaa ttctgtagac cccagtgttg gtggacaggt tatggacatt catgcccaat
      661 agtataaggg aactcaaggg aaaaaaaaaa aaaagaaaaa caaaaacaaa aactatttta
      721 agacttttga actttgacca gatgttgaca cttaatacaa aattccagac agctgtgatt
      781 attttttact ttttgtcatt tttcatcaac aacagaggac caacaaaaca agaacacaaa
      841 tgtgaaatca tgggctcact gaaatgaata tgtccatgta cagatcctct ggaaaaaaaa
      901 aagactccaa gagttataac tactgtagta taaacatagg aactaagtta acttgtacat
      961 ttctgttgat cact
//
LOCUS       KCKM01003019            1092 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47359apa ultra-conserved element locus
            uce-4964, sequence.
ACCESSION   KCKM01003019
VERSION     KCKM01003019.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1092)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1092)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1092
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47359apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1092
                     /note="ultra-conserved element locus uce-4964"
BASE COUNT          371 a          207 c          191 g          323 t
ORIGIN      
        1 cattacatgc aaattattta gaattttatt ccacttttca aagcatgaag ttaaatgctc
       61 ccctttctaa aaataataat aaaaatcaat aactattatt cagtattcat ttgatattcc
      121 acaatggacg actgtgaatt tgaactccag gaaaggttgc tgtttcaagc ctccaaaggg
      181 ttattatata aagcatagag aaataataat ttaaaaaaca cgcaaaaacc agcagaaaac
      241 atccatcctt ttgaattgta actaaagacg agaaaagaca gaagcaaatt aattagaatt
      301 accaacttac agtaatgatg gtactgaaaa caagacagac agagacaggg tcttgttaca
      361 acaggtaata gatgcaggaa agaatatcca ctaataccgt gggctcagag caacacgcct
      421 cacttttagg aaacatacca gcagaaataa ctagtgtatt atcctgtggt tgcttagaga
      481 tgacttaacg agttcctgag aacaggccat tagctagcat ttgcttttgc tattaaagct
      541 ggatactgtt ttcacccctt ctcttgtctc ccgcagctca gcacctgtct ttgtttggga
      601 gtgacatcta tttctttttt tccaccagga attcggtgca tttttaggct tgagtggctt
      661 aggagcaaac cagctgtgaa attgtttctc aagatactgc cctcttcata acatttgcgc
      721 aagaccttaa taaaagaaat ggcctgttgc cctccctgtc cctggccaat tgcacccatg
      781 aaatatattt cagtaatgca attttttggg gctgttgaaa caattgccgc tataactgta
      841 aaacacagct agattgcttc taaactactt tcaaaaagta agtgctcgca aaagagtcag
      901 ttctcaatat acttttatcc ttggaagacg gaggaaagtc atattgagta aaaaaataat
      961 ttcgaggctg tataatttat agcacattga ctttggataa ttgcggcatt aatattagag
     1021 taaaaaataa tttcaccaat agggcaccaa cagagtttat tgtggtcaaa caatgaacac
     1081 aattcccatt gt
//
LOCUS       KCKM01003020             464 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47375apa ultra-conserved element locus
            uce-3260, sequence.
ACCESSION   KCKM01003020
VERSION     KCKM01003020.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 464)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 464)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47375apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>464
                     /note="ultra-conserved element locus uce-3260"
BASE COUNT          153 a          110 c           89 g          112 t
ORIGIN      
        1 taaggtaaaa ttagaagatc tggccttccc gaccattgtt atctttgaat taaggaagcc
       61 gtttctgaag ccaccatgca gtccctagct ctgctcagct ctttttcaca aacggaaaaa
      121 gatcaggctt aactaggcta gtctcattta ggcccacgcc tacaagggag ggtttattaa
      181 aattccttca gcttaagctg acgcaggttc aggaaatctg cttaagccaa gcctgaccta
      241 cataaagctt cagactgaag aagacgagaa gaaacaagca aaatacactt ttgtacgaag
      301 cgatcagaca cacacgggat ttaaaaacac caaggtttaa agattagcac gttacccagc
      361 taaaaattac ctaatttagc cagagtaaca agctcagacg catctccctg gctctcgtat
      421 ctcaaactga aaccgcgctc gagattattt tacacgtaaa gacg
//
LOCUS       KCKM01003021             476 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47391apa ultra-conserved element locus
            uce-6009, sequence.
ACCESSION   KCKM01003021
VERSION     KCKM01003021.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 476)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 476)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47391apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>476
                     /note="ultra-conserved element locus uce-6009"
BASE COUNT          169 a          101 c           96 g          110 t
ORIGIN      
        1 cattagaaaa aatagatcag tgttttctct cttcctattt aagaaatgga aaaaaggcag
       61 gtgttaccac ctatactctg tgaaaaccct acacaggctg ctctatgact gacctagttt
      121 ctacgctctt taaaggctat ttaaacaaaa attaaaaggt aacacattcc tacttctttc
      181 tgaaaaatcc acagaataga atattggctg aaaagagaag agcccagaag aaagaagagc
      241 acaaaagcat gcctgcttgt ctgtgttcaa cacaaagaac attaaatgaa aacaactggc
      301 acgccgccaa attcctatac aggcaaagag attcaaataa attgatttca cgcatcacac
      361 tgacctggga tcagtgagca gtggtacaat acactcgctg ctccatgtgg ggcaaagccc
      421 attaatgtta tcagagccac agtacattac caagggggaa gggagggcgg ccgagg
//
LOCUS       KCKM01003022            1116 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47405apa ultra-conserved element locus
            uce-5649, sequence.
ACCESSION   KCKM01003022
VERSION     KCKM01003022.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1116)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1116)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1116
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47405apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1116
                     /note="ultra-conserved element locus uce-5649"
BASE COUNT          335 a          238 c          234 g          309 t
ORIGIN      
        1 aaaattgatc tgagtgaata tatccatatt ttggcactga tgaagaacat taacaaagag
       61 atgcagtttc ctttgtgtta agcactgaaa tgctcatgga gcatgatctt ttttaaggaa
      121 aacttaagga aaacttgtta aagaaaatac attcacacta atactaagac atacaagatg
      181 cactgagaca ctgacaaaat acagttcaaa acactgcatt acggaggagg aaataacata
      241 gtgagtaggt ggataagaac cacatctttg aatttcatac tcgtatcttc cccacctcct
      301 tctccccagt caaagtacaa aaaaaaaaaa aaaagaaaag gaagaattat aatgtttaca
      361 aatcagtgaa cgactttaat gaaagtctgg ccactgcact gtactgtaaa gatcactgca
      421 tgcatacctt ttcctctgag tgccactgct gaccagtaag tttggttgct gtgggccctg
      481 actatgcagg aggaaagtgt ctatgcttgg cacggtggct gatgcctcct cacttacttt
      541 agggctgccg atcttgctct ttccaagctt gcctttgctg cgtcgggact gctcatggtc
      601 aaactctaaa tcttccagtc gctgggtaag ggcaagtttt tgctggatag ccatgcgcaa
      661 cagagagttc agggtcttct tctcatcctc tgcagctgct agctgcctct gcatctcatc
      721 cagctgcgtg acatactcat cacacctggg aaaagaaaca aggcagaaat ctggggaagc
      781 ggttcaagaa ccaaccctac tggtgatcac attcctgggc cgattcaggt ccaagctttt
      841 acttggatct gaacctaatc ctggaagtag acagcctgaa ttcttgcgtt cctgctttga
      901 ataaatttgg acttggatct gaatgcccac gcttcctcat caggacaacc tgtgtctata
      961 ataccagagt agcctatgtc agtgtaaata ttctgatgca gataatgagc aactggaggc
     1021 aaggtttgag attatcttca tgttagacca caaataacaa ttttgagtgc tgtttcagct
     1081 agtagttcat cagggataag aatgtctact aattag
//
LOCUS       KCKM01003023             500 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47420apa ultra-conserved element locus
            uce-6575, sequence.
ACCESSION   KCKM01003023
VERSION     KCKM01003023.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 500)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 500)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..500
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47420apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>500
                     /note="ultra-conserved element locus uce-6575"
BASE COUNT          176 a           86 c           83 g          155 t
ORIGIN      
        1 aaagaattaa gagaacagga aaataaaaaa gtctattatg aattagaaat ggttttattt
       61 ctgctgcatt tcatctctaa tgattttttc cataatcaaa catcccattc tgctgcagaa
      121 ccagctaaat gttttatatt tggggcaata aaggtttttt cacttctatt actaaaggga
      181 aatattaggg aggtctttga atgtacatgc tatatgagca aacaccactt aagccaggct
      241 ctgcttccta aacaagtact taatctcctc attaaagata tatgaaacta gaaatcaatg
      301 agcactggtg gttagagctt tttagcggaa ctaatgccta caccttgtct aacattagaa
      361 acttcacttg tggtttacag ctgctacaca cggagaaaca tgaacctaga aggaaagact
      421 ttcagttgtg ctaataatta tactaagagt tctggataag caggtcacat aaatatgtaa
      481 cataaaattt tcacttcaca
//
LOCUS       KCKM01003024             444 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47436apa ultra-conserved element locus
            uce-547, sequence.
ACCESSION   KCKM01003024
VERSION     KCKM01003024.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 444)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 444)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47436apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>444
                     /note="ultra-conserved element locus uce-547"
BASE COUNT          159 a           64 c           88 g          133 t
ORIGIN      
        1 gcaagttaaa tataacccta tgtaaaaaca ggaaggacag cgctaagttg tccagcttaa
       61 cagcacacac ttaaaacata atagagcact tgttactgta ttttatggaa cggaaactcc
      121 aaatgtaaag atgtattaag gaaatatctc aaagttatta gggaaggata tttacaatta
      181 cagattgctt tatattatgc ttttatgaac atctcaggaa atgaaatagc cctcagctgt
      241 agcgagtgaa gagggaggta attttcctta atacgggtga taaaattaat ctgattgaaa
      301 tcgctagcga ttatttcgca gaatactgag tggcagtaca atcacttaca ctcttttata
      361 tttttttagt caaagctcgt gtagatgaaa gctaattaca aagtagtgat gtgaagcgct
      421 aaggaaatag tttgtatagc atag
//
LOCUS       KCKM01003025            1064 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47465apa ultra-conserved element locus
            uce-5684, sequence.
ACCESSION   KCKM01003025
VERSION     KCKM01003025.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1064)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1064)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1064
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47465apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1064
                     /note="ultra-conserved element locus uce-5684"
BASE COUNT          312 a          198 c          236 g          318 t
ORIGIN      
        1 ttttccttac gggtgtgctg aatcattgca gcggggaaat tgcagccagc cttgggctca
       61 tgcattgctt ttctttttct tcggaaaaga ggaaacggca tcgagttttt ctgtaaataa
      121 gcagcagcgt gtccccagca cacaagggag ggaagcgctg tcgatgcaca tggagaacaa
      181 gagcctggaa ggtccattct cctgcttttg tcttcagtgg tattgccttt ttaagaagta
      241 aatactaatc aggcacacga tgattacaaa aggaggtgct cctgcaagaa aaagaaaagg
      301 gaaaaaaagt cagagaaagg gatgtacact atttactccc tcagctacaa atcagcgttg
      361 aattggagtc taagaagtgt acattagcat tcagctggct gtttctgcga gccataatag
      421 acacgagcat tgactagacc caatattagt gatggtactg ggaaaccatc cttgcttttg
      481 gctgcctgaa ggcagtagtg atcccctgct tgtcctatct gtcagtctat ttgatctcca
      541 aatgaattgc ttttgataac agctatataa atgcagaact gttccgctgg gccttcttaa
      601 atgagactcc tctctttcat ctcccagtca tttcaaaaag cagatagact tgttagaggt
      661 ttttaatgca atgatttatg ttttatcttg cctggtttga ggcagcattt atttagcact
      721 aaattcttcc caagcctcta tgtgaggaag aaatgcttca acacaatatt tgggacttaa
      781 aatagtgtgt ctatgtccat atgtgtgcac gtgtgtgtat gcatatgtgt actctgcttc
      841 atcagagaga aattagtgat gtactgtctt tttaggaatt caattcactt ggatcattgt
      901 accttcagcc aaattaagag aaacaggaag gaaatggtat ttgaaaatca tctagctagt
      961 agcattcagt ctagggcaaa taacaaacat tttggacagg aagagagtgg gagaaatgat
     1021 gtatcttagg tttgataaaa agaaaatctc tgactcttca agct
//
LOCUS       KCKM01003026            1060 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47480apa ultra-conserved element locus
            uce-5475, sequence.
ACCESSION   KCKM01003026
VERSION     KCKM01003026.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1060)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1060)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1060
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47480apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1060
                     /note="ultra-conserved element locus uce-5475"
BASE COUNT          363 a          207 c          180 g          310 t
ORIGIN      
        1 acaatccctt cattcgatgc gcaatatgaa aaaaagatgc aaaccatgat ggtggcaaat
       61 atcatgcaca cgagcctcct gctggctctg cactgagaat ggagggggct gccctcaccc
      121 tgagtgaaat ctattcaaaa gtgtgtgggc tgagcagctt gtgacaggtt ttcacagcca
      181 tgtggcagtg ctcaccacaa ttcactgcat aaaaggactc acatacagcc tgtagtgcgt
      241 ctcaggttta aactcatgat gtgtgccatg cctctctcgc tctcttttaa tcaaggaagt
      301 agagtgtaaa tccagcatgc tgccttaaaa taagtgaagc cagagaaacc ataaaaaagg
      361 cttcaaaacc aaaaagaatt atttttagaa aattgcagaa tggtttataa caaccgcata
      421 gaacttctct tagtaaatgt cgtaataaag gttcattgat caaaagaaat tggctctatt
      481 gctcataata gcatctcatt gattgaaaag cattgcctgt aatggtttcc tccaaagcag
      541 catctgttat gtattaacct ttcagccttc agaatcacgg gatatgaatt tcttgctcaa
      601 actactggtc agatgaccca tccatgacat ttaataaatt gcagctctgc acatagattc
      661 aggatttcat aaaaacaggg agaaacacat tacagaaaag gcacattttt catgacgcat
      721 catacaacca agtcctttat gttaaaacaa caaaataaac taaactcaga gtgtaaactc
      781 ttttattaaa gctaccaaac aaatttaaaa ataatcatcc aggctttaat ggtaaacagc
      841 aatgtaatga ttgaactttg aatgaaagaa aatctggcat gtctagtttg ttcggaaaaa
      901 tcatacaaca tgacagcttt gattttcatc tttgtactgt ttaatatgat gtagttacct
      961 atcaaactca tattagccat agcatgtgta catgactata aaaatacatt catttatggt
     1021 cttctctatt cttaacattt aaacaatgtt acagtttatt
//
LOCUS       KCKM01003027             593 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47496apa ultra-conserved element locus
            uce-5050, sequence.
ACCESSION   KCKM01003027
VERSION     KCKM01003027.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 593)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 593)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47496apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>593
                     /note="ultra-conserved element locus uce-5050"
BASE COUNT          123 a          154 c          186 g          130 t
ORIGIN      
        1 ctgagagtcc ctttctgtct tgtgcagctc ttcccatgaa gagacccccg gctcccaccc
       61 gctctacggc cacggagagt gcaagtggcc tggctgcgaa accctctgtg aggacttggg
      121 acagtttgtc aagtaagtgt tccccttttt ggggaaggtt ttgctggagg aggagagagc
      181 ctgagctctc ggccaggaca gcgtgggtct ggtggggggg gagaccctgg aaatggggtg
      241 tggacacctc aaagtcagag ccggagaggg caacaggaga gaacacgcca aggactgctg
      301 ctagaggaga ggagacccag tgcagggagt ttgcagctcc cctcctgggg ggcgggagga
      361 agcagatggc agcgcggcac ccgctgacac tgcttgtggg ctccggtgct gactgattaa
      421 ctccgctgtc gaagagccct ctgctagcgt cagggtcaaa caaattgttt tcacgcttcg
      481 tcagaggttt acttaattag ttcatttgca attagatctc tttgtagcca ggatttttag
      541 caaagacatc agaaggaact gacgggcctt gcttgctcct tccccccccc gcc
//
LOCUS       KCKM01003028             836 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47512apa ultra-conserved element locus
            uce-7569, sequence.
ACCESSION   KCKM01003028
VERSION     KCKM01003028.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 836)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 836)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..836
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47512apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>836
                     /note="ultra-conserved element locus uce-7569"
BASE COUNT          223 a          148 c          165 g          300 t
ORIGIN      
        1 gattagctgt ttacttttgc aggcgaaagc agggcaccct gggaagccgt ggctaagaac
       61 tttcaaagca gcttccatta tctactgttt aggtcaagcc aactagcact tctgagtaat
      121 ttataaagtg ctatactcaa aggtattgca caatctcatt atcattagtt tttgcatatt
      181 taactacagt ttttaattag atggtatttt attattcatg cacataattt gactccaact
      241 caggcagttc tcttgtaaaa ggaaattcat ttgaatcaaa agtttgtact tcatggtgtt
      301 tagctggcaa gtggtgcaag tctgcagtct ataatggctt tcttttaatt tagctaatag
      361 ctatcatgtt atgtaccttt ataaatttgt taaattcata gcactgggag ttgtctctct
      421 atgcggtaac tgtaagtagt ttgctatgtt tggctttcac atacaaactg tttgctcagg
      481 ctccttgatg tattattaaa attggtaatg gactcctggg acgtcatcta gttatatgcc
      541 ttcatttgca gaataaacca tgcgttgttt tcatctttac tcatgattgt taatggcatt
      601 gatgatgaga ggggtgtttt tccactgcct ttatcagcgc tgctttatta tgcaggcaaa
      661 atagccaagc tgctgatttt gtttaaggtt ttcaattagt catttgactg aacacatctg
      721 ttactggcag gcttccagcc ctggactgga gctattacta gtttacacct gctgaaccat
      781 ggccataagc tgtgaatggg aataaaccta aattggcctt ttagatatgg ttgaaa
//
LOCUS       KCKM01003029             315 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47527apa ultra-conserved element locus
            uce-6044, sequence.
ACCESSION   KCKM01003029
VERSION     KCKM01003029.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 315)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 315)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47527apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>315
                     /note="ultra-conserved element locus uce-6044"
BASE COUNT          114 a           55 c           68 g           78 t
ORIGIN      
        1 caacctacca cctctaccaa aaacaagaag gaaagaaagc ctaaaagggt gaagaaggat
       61 tttcattatg aagttaatta gcttctgagc caagctgcac cttttcaaga ggaggaatta
      121 gagggattta attgctttat cagccttctc tttgattttc agcaatcagg ccgattccat
      181 ttaatttaac tgccacagat gagaagaaaa ttgatgcact cacctgcctt ggagcagaaa
      241 gagagagtga gaaagaaaag ttggagaaat tggcaaatat agtgtctgca gagtaatgaa
      301 aaccaacagc atttg
//
LOCUS       KCKM01003030             888 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47542apa ultra-conserved element locus
            uce-335, sequence.
ACCESSION   KCKM01003030
VERSION     KCKM01003030.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 888)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 888)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..888
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47542apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>888
                     /note="ultra-conserved element locus uce-335"
BASE COUNT          325 a          184 c          158 g          221 t
ORIGIN      
        1 ccaagtattt ttctattcac cttctttgat gataaagaaa aaaaaaactt aaaaaagaag
       61 tagagaagtc aaaactcaaa tggaaagtaa aatctcttaa aaacctgtct taatctattc
      121 ttctgtgatt gatagcaatg ctctcccaag cagatcgtgg ctctctgggc aggcagatat
      181 tattgaaaaa tcctcatccc tcagaaacca agatgtacta aaacttagaa cacaacccct
      241 actacattct gtaaaatacc attgctagag taaagcacga agatttacaa tacaatcact
      301 ttaagtgccc cacagccaac atcaatccta atccttaaga gggctaaaaa taaagattgg
      361 agggcagctc acaaggtagc tgtgatcaaa ttaggaggct gaaaggacag agagggacga
      421 agaaggaagc ttataaacat ctgatccagc tgactgtggc catatggcag ctgctgccca
      481 gataaagaga ttaagaatag aggagtgcga ttacagctgt ctggccaatt caggcagctc
      541 aaatctacaa gttctaaatt agtcgcaaat acaaaaactc cttcaaataa ttattgttat
      601 gctgaaataa aaggtttcaa atgctacacg cgaggaagaa aagaagaagc cagtcaagcc
      661 attctcccaa aagtttttaa acacataact gatttctatc tttcagaagc actacagctg
      721 tatgctgcta cggttctaag ctgctggata tacaaccgtg aagtttaatg aaagacttcc
      781 ccaccatttc agccagagca gtcctttttc acacttttgt ctatttcact aaaacccccg
      841 taaagtcact taaaagatgc aataggagaa gaacataaag cagaactc
//
LOCUS       KCKM01003031             457 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47558apa ultra-conserved element locus
            uce-1297, sequence.
ACCESSION   KCKM01003031
VERSION     KCKM01003031.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 457)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 457)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..457
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47558apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>457
                     /note="ultra-conserved element locus uce-1297"
BASE COUNT          146 a          103 c           78 g          130 t
ORIGIN      
        1 atccctcatc agccaaaacc atgagggctc tgtgctcaaa taacaggaaa catattcaat
       61 tttcctaaca gaagacagtt cattaagctg tgccacatca aataaaactt taatttctcc
      121 agcatcagag tcgcaatgaa agcaattgag gaagatgagc catatggtac ttctatcagc
      181 aaacacatat tgctcattcc cccaaagttt tctaattctg ctccccagac ctgtgtaata
      241 tagataatgt gctctgagcg cagcaaccat gagctatctg gtgtacactt ctaatactgt
      301 atttaatggg aaataatgaa tcataaaagc ctgcagaaga cggcttttgc taacctaaat
      361 ctcagctgta atttcattgt tctgtgccta agatgctgtt tgcccttttc aaataacagc
      421 agttgaacat aattatgcgc tacaaacctg ggctgca
//
LOCUS       KCKM01003032             837 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47573apa ultra-conserved element locus
            uce-5689, sequence.
ACCESSION   KCKM01003032
VERSION     KCKM01003032.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 837)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 837)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..837
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47573apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>837
                     /note="ultra-conserved element locus uce-5689"
BASE COUNT          262 a          187 c          211 g          177 t
ORIGIN      
        1 ggccacttgg accaccggcc caccatgggt ggcggctttc cttgagtaga gatgaaagtg
       61 gtgggaagaa tgactacaca ggggaaaagg aaaactctct gcgtttctct gcattatcca
      121 tctcccctcg accgccatgg ggacgcagcg aggctctgcc cccccaagac atggctcacg
      181 cagaggtgaa aaactagaca aaaagtttca ggcccgtttt agcaagaaat aacgaggtga
      241 caacaaccaa agaatgcagg tagccggcgc cgcgctggct ttggccggcg ctgattggca
      301 aaggcagcga gcaaaggctc aaaccagctc tttgacaagg cctaacgcct cgccggcacc
      361 cccgtgtaat tacacacttg agtgactgga ctctgaagaa aattgaaggc ctgagctgcg
      421 aacagctgcc attttctctc tccatcacgc cagcatgatt acttgagaaa tgaacagccc
      481 cggctcaaag ctactccaga attctcagag gaaatatggc tccgtgttca aataatgaga
      541 ttcttaaggc aagcgttact tacaatcaca ccacacacca aaaagggaaa agagggggaa
      601 gaaaaaatgg aaaaaaggag agccagaaag aaagaatgcc agggtcctta tatcttacaa
      661 attagaattg gagaaatcca gcctcagcct aggacgatca tgctgggttt tcagcttttg
      721 agagttattt tgtggatggc tactttggac atatttttgg cagtaagaga ccacattatg
      781 tttgttaaaa aaaagaaaga atgaaaaagg agtggagaga tgtagtattg taattag
//
LOCUS       KCKM01003033             573 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47588apa ultra-conserved element locus
            uce-2877, sequence.
ACCESSION   KCKM01003033
VERSION     KCKM01003033.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 573)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 573)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47588apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>573
                     /note="ultra-conserved element locus uce-2877"
BASE COUNT          212 a           80 c          100 g          181 t
ORIGIN      
        1 aaaagaaaaa aaaaaaagac ttccatcgta aagaaaatat tttcagaatg aagatatgct
       61 acttcagagc tctgggattg aacagtgttg ttgtattatt cttttctttg gccattgctg
      121 tgtactattt ttgttgttga aagtggcgaa aactttgtga tcactatctt gcacatggtg
      181 gaagatgtct caggaaagcc gggtttcccg aggagcaact ccacaccatt tcatgtattt
      241 ttaaaaccca actcctagca ctgaagatat tattaaaaaa cgaaataaaa taaaaaaaag
      301 acagtaagaa agaagaaaat acctaatcta atgtgtagca gttacatatt taccaaataa
      361 tggactcaaa agaaatagat gtttgaagag tgctttatat attaaaaaat cgctttatgt
      421 ttaaaaaaaa aaaagatcaa tgtttttgat tgttttgaaa ggaagaaaga caatggaata
      481 acatacgctt caagtatgtt ttaaaaatta tatgaacatt gtgctccctg cctgcttgga
      541 tcaggaaact tgtgcattac ttttcttttt gtt
//
LOCUS       KCKM01003034             918 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47602apa ultra-conserved element locus
            uce-3376, sequence.
ACCESSION   KCKM01003034
VERSION     KCKM01003034.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 918)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 918)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..918
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47602apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>918
                     /note="ultra-conserved element locus uce-3376"
BASE COUNT          286 a          198 c          149 g          285 t
ORIGIN      
        1 ggtgtgcaaa tgactgggac tggctaattg attgtgaatc attaatttcg aacaaatgtt
       61 tttgtgtaaa tggagaatca gaaatctcat caaaatcctt ctggaataaa gaatgctggt
      121 ttaggcacac aagaaatgca ttgattccac tctgccacaa taactcacag ttgtgatctc
      181 atagagaaca acttcttact atctatgagt ctgtgaaacg tctaatgcca gatttaactt
      241 acacaagact cttgttgctt tcagcaacac ggactgagca cccatgtcac aaacatttgt
      301 ttaccttttt catttaactt atttatcccc tttcctcatg cagttaaatc atagcatgca
      361 ctgtatgctg atttcctctc atagttaatt tgtatcttta gaaaaaagct ataggaaggt
      421 attaatctgc ttaacatttc taagtacatc atccaaggga ttttgttttt ttaatcttac
      481 atatgctcag cagagttact ggcaaaaact gtacattttc tccatttcat cctttcaaca
      541 tcaaatggta agcagcaaaa attggatcag acttcaaaga ctatgctgtg ctccaagtca
      601 cagagcgact cctccatttc acatattgaa ttcgagcagg atatcaaagt gctaccaaag
      661 aacctcaggt ccttactaaa aaagagtctc taacatctgt agaaagtgaa gtgcacagac
      721 aaatcacctc agggagcagc tagcatttat tctcagcagc aaatttccag ccttttgatt
      781 ctcttattca ctgtacctcc ctgtctttct acagaactaa agttcttagc aagcaggctt
      841 ttgtctcaaa gacttcaaaa catcactaac ggtttcatgt tcagatggct atgccaagca
      901 gccatgaaca cattgcag
//
LOCUS       KCKM01003035             808 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47618apa ultra-conserved element locus
            uce-5964, sequence.
ACCESSION   KCKM01003035
VERSION     KCKM01003035.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 808)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 808)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..808
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47618apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>808
                     /note="ultra-conserved element locus uce-5964"
BASE COUNT          193 a          211 c          192 g          212 t
ORIGIN      
        1 agaaaattta aggttcctcc ggagagcaag ggcactccgg gaagcttgag gcaacctagg
       61 aaagtcgggg ggttgcaggt accaattcct aggcctttcg ggcacctctg ttattgccgc
      121 cctcgttaat gaaaagctcc gggagaacca gctctccccc cccaccgcgg gcaccacatt
      181 tttgaagtgt cacctggaag tatttgcttc ttctccaaac tgtttagtag cggataagta
      241 aattgcaagt aaacctagtg aattaggagg attctctatc agtttaattt atgttttata
      301 gttagtttag ccttctgatt tgattgcctt agtaatgtga attgcctaca gctgctgacg
      361 atacagcttt aattctgttt taaaggtcat gtaaacatgt gcctgtagca taaggaatgc
      421 aaattcaatt cccttttaat gcttcctcgc attcacttca cagccttcac ctcgaaaatt
      481 agcaggattt aatagaaaac cggttgaatg ttatgatttc attagaaccc cctctccttc
      541 ccaggcgggg ctctccccgg gccaccccac gcccgtgatg cgacccccga ggagcttccc
      601 acgcccgttt tgggggagat cagggaggtc ccagccctgg cttggagtca gcaccttcac
      661 ctcgaagctt tctttagctg gaggtgacca ccacccggct ggataacgaa ttgcccccca
      721 aagcagggag aacatcgcgc agatgtggag cttgtcatcc agctgcgcct ttcccctacg
      781 tcaccgtgaa agagggtgct tggagaga
//
LOCUS       KCKM01003036             780 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47633apa ultra-conserved element locus
            uce-1038, sequence.
ACCESSION   KCKM01003036
VERSION     KCKM01003036.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 780)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 780)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..780
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47633apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>780
                     /note="ultra-conserved element locus uce-1038"
BASE COUNT          263 a          145 c          128 g          244 t
ORIGIN      
        1 aaaaaaaaaa aaaaaaggaa gaaaagatcc tttgctcatt gcccaggtga gatagcctgg
       61 tgcgtcctct cagcctcgac acgcgtcaag taaaagaaag gttaaaatta gaaaattcaa
      121 tttatttgat aatttcccag aataattaga gttaatatgg gttaattaat atgcaaatct
      181 ctcagcagat gttctgcagc agggcctgtg tgagaaaaca gcctttgctt tctcctacgt
      241 gattttggct gtcagttatt gggtataatt actgtaacta accgaataca cacaaaacct
      301 ttggaatata aaattgttac agttctagtt ctgcacaagc tgctactttt ctgcaataaa
      361 agcgaacaat ttctttcaga aaataggagc ctttttgttc ctttcttgat ttaaaaagaa
      421 gaaatgaatc aagtaaatgg cttatctttt ttctatgcat aattaggtca gtattatatg
      481 aacattccaa tgagcagtgg tacaaacgta catataaaat gatagctcaa accacctgca
      541 aaatcacata aaattgtttt attcagaatc tttttcttca taccagaact ttgaaacgct
      601 ccgtgccttt cctgccaatg ctgccagcat ttgccaaatt caaagggatc ccataacttt
      661 tattattttt taaaagcaca acagcaacgt tttcttcaaa ggcaccagag catttagaac
      721 tgataaaaca agtcattctt tgaaaggtag cagaccagtg ctgttcttga ccttttattt
//
LOCUS       KCKM01003037             626 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47647apa ultra-conserved element locus
            uce-469, sequence.
ACCESSION   KCKM01003037
VERSION     KCKM01003037.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 626)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 626)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..626
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47647apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>626
                     /note="ultra-conserved element locus uce-469"
BASE COUNT          209 a          107 c          150 g          160 t
ORIGIN      
        1 tgtatgccta ctccggatgc ctgggaaatg gactgcgtgc taagaaaaca agatgagggt
       61 aaatggagga atccctgcac atgccataaa ttgagaagat atgctactta gcaaagaatg
      121 aaagctgcaa acggcagtgg agggcaaaag ttaattaggc tactgtgctg ctgtgagtga
      181 gtggaaagta ggcacaacca gaaacaagat ggctgctcag cagtgcccta atacagccaa
      241 aagatcatat ccttagctct gcaagggctt atgggttagg gggaaatcat acacagatga
      301 ctaatttttt tatggttcac agccgatcaa agtgaaattc agcagctgtt caggacaagt
      361 gaccactcta acggctgtaa tataacctgc taaatagaga gggaattgca tgagagcaaa
      421 aggttagctg tgattatcgg caggtgagtg ctttattgaa gttgaaagac cattaacatt
      481 gatggagtaa ttatttcaac ttgaaagtaa ttaccttgat gggtgataac ttctccagtg
      541 ttcccagatt tgattggacc aaacaattgt gaactcttga agcctagaaa aatattacaa
      601 caatactgca atgtttaaat tactga
//
LOCUS       KCKM01003038             590 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47663apa ultra-conserved element locus
            uce-14, sequence.
ACCESSION   KCKM01003038
VERSION     KCKM01003038.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 590)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 590)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..590
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47663apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>590
                     /note="ultra-conserved element locus uce-14"
BASE COUNT          175 a          124 c          132 g          159 t
ORIGIN      
        1 agttatcaga ttttgaaaag agagctttct cctcttgtga ggtccaggta aaagttcacc
       61 cattccctgg ctgcttgctt ctgacaaaca aaaattaagg acctgaaaat aactatttta
      121 tctgaaaaaa atgctaaaca tcccaaaaca aacattcagc tgcaccgctg ccaaattcca
      181 caagtaagag agctgcaggc tgagacagct cgtgtctcgc tggggaataa cgggtaaagt
      241 ttggccagct gccccttcca acccttcagg gacccgcaat ccaattgcag tgtcttagcg
      301 gatgtgaatt tcaaggttac acctgggtgt tcaagggcag ggccaagtgt aatcggcact
      361 tagatcatag attaatctta tttgccatct attaggtttg attcctgctt cccgctctcc
      421 ctccctaaag ccaggattat tgtgatagtt taagataatg gattctaacg gaagaaaggt
      481 cacgcaggca ttgagatttg gaaccttaag ataatatgat taatctaaaa gcttctttct
      541 agaaggggag gggatactct catacgttta attgagggga gagagcgaga
//
LOCUS       KCKM01003039             653 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47679apa ultra-conserved element locus
            uce-4438, sequence.
ACCESSION   KCKM01003039
VERSION     KCKM01003039.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 653)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 653)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..653
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47679apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>653
                     /note="ultra-conserved element locus uce-4438"
BASE COUNT          214 a          115 c          123 g          201 t
ORIGIN      
        1 aaaatgttgc taccaagcta tttaaaaact gagacagata aaatggaaaa gaaggaaaaa
       61 accaaactgt gccaaatgta gtgccttagc aagtagagtt ttgaacattc tcaaaagcat
      121 aaagtttcct atttacttca ggaaacagct tacaagtcaa aacgtgctgt aggttttgtt
      181 ttgtttcgag ctgccaattg ttagtcaaga ttactattca ttttacagga gtgttaagaa
      241 tgcaaatggt taacagtagt ataaactata tacttggttt aagtttgaat gtctaaaact
      301 attacacact gcattcatct gcattccctg tttatgggaa tgaaatatgt agtcatttga
      361 agtccacaat atgtatactg tgtttgtaat aactgcagat tttacaagca cattattctt
      421 tccattagga ttaaaacctc accgaatagc aatttgtgaa agaattctag cagggccctg
      481 agcccagaac tctgacctct gatgagatgc ttggcagcaa caaactctag gtctaagcaa
      541 aacatctggt ttgagttaga cttcctgaaa aaatagcccc tgtactgggg aaactggtat
      601 tcactcagct ttgtctatac actttgactg acttcaacac tgttgagggg gtt
//
LOCUS       KCKM01003040             546 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47693apa ultra-conserved element locus
            uce-2036, sequence.
ACCESSION   KCKM01003040
VERSION     KCKM01003040.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 546)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 546)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47693apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>546
                     /note="ultra-conserved element locus uce-2036"
BASE COUNT          174 a          132 c           94 g          146 t
ORIGIN      
        1 aaaaaaaaaa ggcagaaggc ctctctagcc acctaatcac catatcaatg acacatgcca
       61 caacagagaa gcactagttt atttgattga tcatggtaga taaactccaa ataacagaga
      121 aattaacaaa tgcttgacat ttgctcaaca tccattattc tgacaccgct ttcaggattt
      181 caaagcctgg gagtatgctt aatcaacatt catattccct agtgagctac aggcaccata
      241 ttgcgccccg ccttagtact gatgaaaact gcatattggc catttccaaa atgttctggg
      301 actccacata gggccccttc tctcccttgt tcctgttctg cagttttctt ttaaacactt
      361 ccaagacaaa agcatctgcc agtttttctc tctggggatg tatgcaaaat gaacttaaca
      421 gttttaaggc aggagaaacc ctcacatcta aattcattca taggacagaa aagggcctaa
      481 gaggcctctc tagggacaaa accctgctga aattttcccc gacaacagtg ggagctttat
      541 aaaatc
//
LOCUS       KCKM01003041             803 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47707apa ultra-conserved element locus
            uce-6074, sequence.
ACCESSION   KCKM01003041
VERSION     KCKM01003041.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 803)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 803)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..803
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47707apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>803
                     /note="ultra-conserved element locus uce-6074"
BASE COUNT          231 a          141 c          170 g          261 t
ORIGIN      
        1 gtgccagcat ttgcctttgg aactccaggc attgtgagct tttgaaactc agtctttgag
       61 ctggtataac tgtttcgaaa aagtagtgac ggtgagcgag agtggaaaat acccgcgttt
      121 tggatccgtt cttaacgcaa gcttctcttt cctcgcagat ttccacaaga cggcaccgta
      181 tgtggttact ggaagcgtag atcaaacagt aaaagtgtgg gagtgccgtt gattgaattc
      241 acatttgacc cccttttcct ctggatgcac tcagatacca tggttaccca ttgagctctg
      301 tttaaataaa tattgtcctt tcatgtaaat tattctggat gtagattgag cttattaaat
      361 gttacacaca aagtattcat gcatggtgaa tccaaattgt atactgtaaa tttacatacg
      421 ttgtctagaa gtaccatagg tttaagaaca tgggctggca ttggtcacat cagacctgag
      481 aaggcagaag ttggagaatt gaaatagggc acttaactga atagttgaca gtgtcgttct
      541 atgtcggata attatacctg tttttctttc tgctgtctgt tggtgcctga attggtgacc
      601 tcatttggga aaagttttgt agggctcttt cagaaatgtg tatctatgta acatcactta
      661 agtgtgctta ataaatcttc tctaaggata ctagataata aggctgcaat tcagaatctt
      721 ctgaacctta tatgtaatta atggaaatta attaaactct ggaatatttg tcatgaaaca
      781 tttgccaaat caacaggata cac
//
LOCUS       KCKM01003042             871 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47722apa ultra-conserved element locus
            uce-8033, sequence.
ACCESSION   KCKM01003042
VERSION     KCKM01003042.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 871)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 871)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..871
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47722apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>871
                     /note="ultra-conserved element locus uce-8033"
BASE COUNT          286 a          167 c          158 g          260 t
ORIGIN      
        1 agagatgaac gaagatggac aaataagcaa gaattacttc ctgtagaagt aatctttttt
       61 ctacacacaa ttcattagca gtcctggcta cctcctttaa ggtatacgtg aaatgcagtg
      121 agaaatttta cgggggaaca gatcagcttc catttcctaa acactttatt gtaaaagaaa
      181 tcactgcagg aatataagac ttttaaactt ataaaaataa ctcagtgttg cccttttaaa
      241 ttgtttccac tgacaaccga agtcatagtg gcatttgttc atccagatcc cagtacacac
      301 atgtattcat aatgatacat ccctcgaatg gcacagttct tctgtggttg ctacctgtca
      361 gcgcttgtac tcaagaacct tgaatatcag tgactcacta atgttttatg atattttacc
      421 tcactttatg gtagtcattt atgacaagac cagaatgaca taaactgcca taaagcaaag
      481 caatgcaatc acacaaatga ccgtaaatca aggtagcaac agaaaaaggt cataaaagga
      541 aagaaaattg gagaaaacaa catttgagtt cagattcaga agtctggagt taacagcacc
      601 gaacttcagg acagatggat gggagcagca agtaaattca gtgttccacc gatactaatc
      661 attttgtgta tgtggatgca ctgacagatt gatacgtagg tgggttttca ttacttataa
      721 gtccattatg atgtacaagg cattaattgc agctgtgtgc atgggctttt tttcctcctt
      781 aaagatttta gctttgtccc ataacctaag caattcccaa attcagatga ccttttgaac
      841 aacttttcta gaatctgtat ctatccctgt g
//
LOCUS       KCKM01003043             357 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47738apa ultra-conserved element locus
            uce-3326, sequence.
ACCESSION   KCKM01003043
VERSION     KCKM01003043.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 357)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 357)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47738apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>357
                     /note="ultra-conserved element locus uce-3326"
BASE COUNT          119 a           66 c           47 g          125 t
ORIGIN      
        1 tatactgctg ttttgacaca aacagcttgc tacacttaag gattttacta ataaaacata
       61 atgttgtgtt agatattatg actgttgcca cagctgaact gacttgtcaa atcaatccta
      121 atatggctcc cacaggcaca taaaaacctt atttagctat cagttatcct aatcactttg
      181 ttcggtttaa gggtgcaatg cttcaagacc agttcctatt tatacatata tgcccagcca
      241 tttaataaag tcttgattta tataataaat tcttgtttga aaaaaatact ttaaagcagc
      301 aatgttttat caagtgtgtt acatctcttc atacccccaa ataaatatgt taatata
//
LOCUS       KCKM01003044             344 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47753apa ultra-conserved element locus
            uce-5031, sequence.
ACCESSION   KCKM01003044
VERSION     KCKM01003044.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 344)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 344)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47753apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>344
                     /note="ultra-conserved element locus uce-5031"
BASE COUNT          115 a           67 c           56 g          106 t
ORIGIN      
        1 aatgattgca ttaataccca gggtcctgtg gacacctgag acatccttgg tcctaatcag
       61 tacatcctga agagcccgct agtcaataaa ataaaatacc cattctcttt aattaacata
      121 cgaaataaac acaatctgtg acacctagtg tgcagcagca attaagaggc attgcttagt
      181 taaacctcct aatacctcat ttaaatatgc aattaaggga taattgcctt caatcaataa
      241 aaaattgaaa tattttgcag ggacttcaat tatttttgtg aagctttcta ctttgtactt
      301 ggtctgggct aagctgtcaa gtcttataca acttgttgaa gaaa
//
LOCUS       KCKM01003045            1006 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47767apa ultra-conserved element locus
            uce-5313, sequence.
ACCESSION   KCKM01003045
VERSION     KCKM01003045.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1006)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1006)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1006
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47767apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1006
                     /note="ultra-conserved element locus uce-5313"
BASE COUNT          293 a          156 c          220 g          337 t
ORIGIN      
        1 gattttaacc aatgctatgt ttttgtaatt gaattggaat ttcttttttc agacgtaact
       61 gatttggatt tctcagcaga tgcctgtaac aaagtagatc catcaataag taactccttt
      121 actgcattat tggtactcgg ttgtgagaag tttaattgca gtttgtttcc attgttttct
      181 tgacagctgt tgaaaataat gtgatagaac tggatttata ctgactttag gaagcaggta
      241 tttgttaaaa agcagtcaga gagtgcaaag atccatgcca atattccgaa ttcatatttc
      301 cctcgaatgg aaggttgtga taaaatggta catggtgtgt tttcattgcc tgttgaaaga
      361 ctttcatgca gttaaaataa gcattttgat ggtggttgaa ttaagagttt ttgtcagtct
      421 cttctcatca tggatgatta gactaaaatg tctgcttgtc ttgacttgag atcaccacag
      481 cttcagataa catgctttgt gattgaaggt cgaaatattt tgaattctaa taggctgcca
      541 gatgaattgc ttgaaataga ctgtaaaatt tcaaggcttc cttttccatc tgctgtgaaa
      601 agaaccattg ggaatggttg agcttgatga tcatagaatt acgggatggt gattctaaaa
      661 ccctcaaagg gaagttgcta tggagatcta gttccaaact gtgaaatgat tcacctctga
      721 aaggcttcag ggtctgagaa gctgaacaca tcattgttca ggtggtcatt ggttaggaaa
      781 ttgctggtgc ctgtgtaatc agcactcctg tggtagttaa cgatctaaaa aggtttgttc
      841 tgaatgatgt gggacaacag caatgtgcat aagatggctt ctctcaatca tagtttgctc
      901 agcctggtgc ttgtaaaaat acagtgagct aaacggcaga gaaatgaact gcttcattga
      961 ggaagtcttt taaaaacaaa atcttttctc tgatggattt gacatc
//
LOCUS       KCKM01003046             561 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47783apa ultra-conserved element locus
            uce-326, sequence.
ACCESSION   KCKM01003046
VERSION     KCKM01003046.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 561)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 561)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47783apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>561
                     /note="ultra-conserved element locus uce-326"
BASE COUNT          207 a           82 c           98 g          174 t
ORIGIN      
        1 tttgaacatt tagaaggtaa cgcatttagg ataagtgcac aacacatgaa aataataaat
       61 gaaattttcc cagtttagaa aatgaatgta attaattaac atttaaatta catttttaat
      121 tgcaatcatg ccctcccagg ggactcataa gggaccataa ttgcaattaa aagcatgtgg
      181 attagataat aaaacaatgc acactgtctg aaatgtgcga tttaaaatgg aaagcagaca
      241 ttgttatcgg cacatctaac ttaattgtag ccataaagca aatgtgctgt acaaaataaa
      301 attcacatac gggaacattt aattcttgaa tctcttaaag gggacacgct tgagagcaca
      361 ttttatgaca ggttctgttt gaaacagccc tttaaggctt tagtattcag ggatagtgct
      421 ttaatgtttt tgcattaata aaagcatagc cgaatgttcc tattaaaata cacagataca
      481 tttaagtaag agatgaaact gagtgtctaa aatttaagtt gcaggaggca taattatatc
      541 aggaacacat ttttctttgt t
//
LOCUS       KCKM01003047             846 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47798apa ultra-conserved element locus
            uce-5681, sequence.
ACCESSION   KCKM01003047
VERSION     KCKM01003047.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 846)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 846)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..846
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47798apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>846
                     /note="ultra-conserved element locus uce-5681"
BASE COUNT          263 a          180 c          147 g          256 t
ORIGIN      
        1 agagagagat ccaggatagc aaaagcacat gttttgccta aaagacagtc ccacagcatg
       61 cttccatgag gtcatgggtc agaaaaaaac aggaacaaaa cccctaaaaa tgtgacacac
      121 ccttactcag gcctttttta agtgcatgcc taagactgag cccactctta agcccttttt
      181 tggcagatga gctgagcaga gggatttcct ttgctaatga gctacttaca gtatgttctt
      241 ttcagcagta ggagtcagaa cagtgaaagt ttattattca accatctctt ccaaagcaag
      301 gaaaaaactg tttataagaa acttcaaaag cctctgtcac agatatcaag cctatatact
      361 atatgccttt gccaagtcaa attaggttat tttacttgat attaagtttg acaagaaaaa
      421 agcctgtgaa aaccagaatc ccaactgggc gtgcctccca caactcaatt ttttagtgct
      481 aaaattcctt acagtagccc tactcttcac tcttagctta tatttccacc tgttgtctgg
      541 aaatttacct cattgtgtcc tagacatctt ctaatattcg gattcttcaa gaatgtgaac
      601 aacacaagta gactttgttt tggctagcaa accagtctta ccacatgcag atgtctctgt
      661 ggactttggt ttctatttat ttcaacagat tataatttct attatcatgt taatttgcag
      721 gtccactgag tgtatcagac ttgtgggctc ctgagtccta taaaaatatg cttctgctac
      781 atcatttcct ggcgggaaca atgacaagcc aatctgtgta ttaacagcca tagataatta
      841 agaaaa
//
LOCUS       KCKM01003048            1032 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47812apa ultra-conserved element locus
            uce-5713, sequence.
ACCESSION   KCKM01003048
VERSION     KCKM01003048.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1032)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1032)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47812apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1032
                     /note="ultra-conserved element locus uce-5713"
BASE COUNT          205 a          307 c          259 g          261 t
ORIGIN      
        1 cataaaccct attgcatgca cactcagggc acatttctcc tcgttctcca ttgcaaagca
       61 attctcccag cagctctgcc ttgcagctcg ctgctctctc cttttcccac atgtattttt
      121 ctgtggggca gaagccgcca ggtgctcgga cagccccagg gtgagcacct tctccagcct
      181 ctccccacta agagcgtgtt gatgagcgct ggctctgcag ctctagtggt cctggacgag
      241 cagaaaaggg gcagcgagtg atggcttgga cgtgtcctca agccctttgc ctgtctgggc
      301 tgggtaaacc cagcagctcc acacccttcc atgctgctgg tgctggagaa gcgaggggtg
      361 cgagggctgc gctcgctggc acaagctgtc agtctttctg tctgcccgga tccatctgcc
      421 tttgtgcacc tttctttgca agcggcaatt tctgacagct aatatttcac agaaaccaga
      481 gccagctcgc tccctccctc atttctttcc tctctctctc ttctgtttat gaagctgagg
      541 gtaagtgttt aattagttgc ctaattgcct gggtaattgg tagacatact cagctctcca
      601 agtaatcagt ctgaacaggc cttgaaaata tctggcccaa tattcattag tgcagttaaa
      661 tcgttaaaca gttactgtgt ttggttcctg acaaagcccc accgatggcc gcgttggctg
      721 ctcggcggct ctcgtgtggt ggggggacag tgcccacccc ccacaaaaat ggttccagcc
      781 acaccagaag gggctggtgg aaggataaca aaatcagagg acagtgaaag cgggaggtct
      841 gccctcttca acagaggtcg cgatgggagg agacacctcc ttttccagct cgtcctctta
      901 ctccagccgc ccctttcccc acgccggtgg ctggtctccg ccgtgcaggc ggccgcacct
      961 ctcccttccc tgccatgggt ttggaagccg gttttgccat taacccaaac atcaatgtga
     1021 atactgtctc gg
//
LOCUS       KCKM01003049             215 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47827apa ultra-conserved element locus
            uce-1044, sequence.
ACCESSION   KCKM01003049
VERSION     KCKM01003049.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 215)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 215)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47827apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>215
                     /note="ultra-conserved element locus uce-1044"
BASE COUNT           66 a           34 c           37 g           78 t
ORIGIN      
        1 taaattggct ggaccagtta gttttttatt tttattaagt cacactattc ttaaatgaaa
       61 ctattgattt aaagtcagct tagtgaggat ttaatttgtt ttcaggggat tagagcaggt
      121 aacatgggat aattttacaa taaagtggaa tagaagcatt ccttcacatt accctcacct
      181 ttctttcttg ccaggctgca cagacattac aaatt
//
LOCUS       KCKM01003050             549 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47842apa ultra-conserved element locus
            uce-3664, sequence.
ACCESSION   KCKM01003050
VERSION     KCKM01003050.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 549)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 549)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47842apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>549
                     /note="ultra-conserved element locus uce-3664"
BASE COUNT          163 a          100 c          127 g          159 t
ORIGIN      
        1 gcgagtacaa aaaggacccc ctaatggctg ccatttttat ttgtttctta agatccaaag
       61 gctgctgaaa gaacaattgg ataaagttga ggattggaga agcttgattt tcttgttcca
      121 gtgaaatgaa actcccaccc ttttttcttc cccgtcccct tagaagccag tctgctaggg
      181 gctcgtagct gtgtcaaagc cgttgggatg ccactgctga tcactttaat tactaggact
      241 aaggaggata aaattaaaag tagcaccatt gaagcagtgg aagaaagctt gccgaggtgt
      301 cggtgaactg tgaaatataa aaattgcata ccaatacatt tttataggag ggaaacaagg
      361 aattacatta cttattcttg aagagtttgt ccttaaatgg tgaagcgctg tgcacccgcg
      421 tggcggatct ttagaccatt acaaagtaat tgggggaaaa taacagagca aacttttaac
      481 gtttctttgg cgtgtcaggt tcatgtcaga ggatgaaaga ttttactgag atttctcttc
      541 agctgtaca
//
LOCUS       KCKM01003051             938 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47858apa ultra-conserved element locus
            uce-5092, sequence.
ACCESSION   KCKM01003051
VERSION     KCKM01003051.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 938)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 938)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..938
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47858apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>938
                     /note="ultra-conserved element locus uce-5092"
BASE COUNT          277 a          182 c          183 g          296 t
ORIGIN      
        1 aatgggcagc actttaaatt gccaagaagt ttggaatctt ttttctttgt ctttccttgg
       61 ggcttctcca tgtgctgcaa cttctctatg catggagagt atagttagta ttttcatttg
      121 ctgcctaagt agcaaattac cctgtaaaca gcccacaaga gctggtttgt aattgaattg
      181 taactgttga ctttagacat ttggtatatt tgctgcaaga agtaaatttt caaaacttca
      241 tcttgatgca gtcagacaaa atgaaaggta atattcttta tctgccacag attgctgcag
      301 atgaactgct ttcatatgag cttaaataag atttagtgta ttccatcctt cagctggcca
      361 caattgaaag tgatcaggat caatatagct gcccctgaaa gaagcccagt attgtgcatt
      421 acaatagagg aaatggctgc attcaaaatt ttcctgtgtc aaattaattt ccatgttatc
      481 cccaaattca attagatggg aaccccgtgt aactaaaaaa gtgtccgaca tcccttagtg
      541 acaaattacg gtgcttagtg tgcatatcaa ggtgaagtgt tgagccttgc taatcttctc
      601 actaattctc aattaccgta aaatgaagcc ataaatcaca cagacagggg atcgatggaa
      661 atgttgtttt cagggtgatt ggcagcctcc ccaaaggttt tctgtaagtt ggtttaaggt
      721 taccattctc taaggggagg gatgaggtag tcttgctcaa tctctatgat ataggcccac
      781 aggccttttg gggatagtgg ggagggacag caccaatttc agcccatcag acatccaatt
      841 tttctccttt tcatacctgc tgtagtaaat gagaaacaaa ttaaatttca ctccactatc
      901 tccacagaaa ccatttaaat ttttcatgga aactaaat
//
LOCUS       KCKM01003052             966 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47872apa ultra-conserved element locus
            uce-1563, sequence.
ACCESSION   KCKM01003052
VERSION     KCKM01003052.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 966)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 966)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..966
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47872apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>966
                     /note="ultra-conserved element locus uce-1563"
BASE COUNT          227 a          197 c          273 g          269 t
ORIGIN      
        1 acatttcaaa gacaactttc ttattttcca cggaaaatgt tccctaactg gaaggtgggg
       61 tcaggggtgg gaggaagttg ctttgcagct ttggggaaca gagacgtgag aggttttcct
      121 tgggaaccta gtctggaatt aaagatagga gcagcgaagt tgcttgactt gaatctactg
      181 tcccactttg tttttaatca tgtggcacgg ttatatttat ggctatctta gcacccattt
      241 cctggtaggt ggcttaggaa taaaatcaaa tgaagagctg gttaacaagt ttctaagatg
      301 catgtgtgaa accaggatgt ggcattaatt gcctaattac aggaattatc cattgcaatt
      361 ttctcagatt gacttttttt ggaaaattta acacaagtct cggttatctg aaacccctgc
      421 ttgaaccctt ggtccgcccc taatactgtt catcatcctg ttttgtgtca caacaccctg
      481 ctaccttgat tcactcttcg tcgttggcta ggttttggat ttattacttt cgaggacgaa
      541 caatcagtgg accaggctgt caacatgcat tttcacgaca tcatgggcaa aaaagtgtgt
      601 agttgtagtt ttattttacc ttaagaaaga accaagtctt gggcaactcg cagtttcgct
      661 aaaacttggt gattggctca ggcgggagag cgcgcaagtc caaattcgag gctttatcca
      721 tgaaggtggg gaaagtcttc ggagtttgct gaagcgggcg agaggcgggg agcgtgcggc
      781 ttcgcccgga ggcgcgacgg atctggaaag cctgaggact tcggctccgg gctcgttggt
      841 tttgggggag gccttgtgct tacagacctg gggggctgct ccggccgagc ggagctcacg
      901 cgggacccag cctggagcgg cgcttggggg cgagggcaga agggaggtgt ttgcagccgt
      961 ttgaaa
//
LOCUS       KCKM01003053             990 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47887apa ultra-conserved element locus
            uce-2149, sequence.
ACCESSION   KCKM01003053
VERSION     KCKM01003053.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 990)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 990)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..990
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47887apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>990
                     /note="ultra-conserved element locus uce-2149"
BASE COUNT          287 a          206 c          191 g          306 t
ORIGIN      
        1 ctgaagcaaa gggaatgcag caaggccagc tccctgtttc aatgttttct ttaattttag
       61 acctaaaagc tgtgttcttt tccctttcca aagtgctgcg gccccttcat ttatcctcgt
      121 gctgcagaag tcacccctgg ccacgttgtc ctgggcacaa cctcagcatg gcaatgggcc
      181 agcagctggg ctttacctac agtaatggta catatatccc tactcacagg cagggataag
      241 aggtctttgg taaaagaata aaatgagctc tttctctctc tctgcgtaaa agaaagagag
      301 taaataaaat tccagcagct acaagctggc gacattatac tgtcataatc cagaaatgaa
      361 cattgattct gaagaagtcc cttcttcaaa ctttaacgca acaattaagt attccattgt
      421 catggctcaa ttaaatggta tggcctgaga aaattgggga ttgtaaagtg aggatggaat
      481 gtgctttgat cctctttcca gggttattgt ttcattaata aatgaacatg tcatttgtct
      541 caccagaggg agctcctgcc ctccaggctt tttccctttt ttgttcaggt tttataaaga
      601 tgaatttcca gtgctctgaa ataccatgga ttagtagtta agcctgacag cacttcgggg
      661 agtactgggc ttaaagtgcc tcacacaggt ctccaaagca cttgtttact aatagaggaa
      721 atcagcgacc gtctgcagct gctgatatcg cattaccatt tggaaagaca gtagctgaga
      781 taacaaatca cacagtttta ataattactc ctgcattcca gttttttgtt tcctgcgtaa
      841 ctgcaaaggc tggatttctt ccaaataaac agataaaaac agtatggaac ttttatcttt
      901 taatgataat gacaacacat catgtttcac taaaagtttc ctgctgaatt tttttctgat
      961 ttctagagtt tcaataaaat gtaattatac
//
LOCUS       KCKM01003054             721 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47903apa ultra-conserved element locus
            uce-395, sequence.
ACCESSION   KCKM01003054
VERSION     KCKM01003054.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 721)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 721)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47903apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>721
                     /note="ultra-conserved element locus uce-395"
BASE COUNT          196 a          131 c          163 g          231 t
ORIGIN      
        1 tttcattctg atcttatttt taagccgggg tccaaaacct ttaaatcgga ggcaattttg
       61 ttttcctagc tgtcagcaat attttggcta ttttaagaat gtaggacagg gttaaggatt
      121 agtaccagca tttcttttct gtgtatcaga gctgcttagc agtaattaat taggacattg
      181 ggttttgtac tcttggttca ggtcatttgc ctatgagcag ctcaagcctt ttacaaaggc
      241 acgctgcata tgtttctggg tacctttttg agagaagatt taaattggcc agatgaataa
      301 tactttgcta caagtgtttt gccctaggca aaaaaggttt tcttcatatt atcatcgccc
      361 ggagctggaa tcctcaagct tgatgtgact ggtgttatac tgtcacatgg caatgatgta
      421 agaacaggag ctctctgtgt cagacaaatc tggatttagg ggaattatag cagatgttgc
      481 aaaatggcaa cagtttagca agttcctttc atcctgcggc tgggaggcag gtccacacag
      541 tacacccaga cagagaagaa tgttatcttt gatccctttc actccagggc aaggaggctc
      601 cacccgatga ggggaggctg gaaataaaaa taaatttaca gtagctgttt gttttgcaat
      661 atggaaatgg gccattattt attcatgctg tttgcccaga catgtacaaa agatttttat
      721 c
//
LOCUS       KCKM01003055             452 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47919apa ultra-conserved element locus
            uce-3018, sequence.
ACCESSION   KCKM01003055
VERSION     KCKM01003055.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 452)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 452)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47919apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>452
                     /note="ultra-conserved element locus uce-3018"
BASE COUNT          129 a           83 c           78 g          162 t
ORIGIN      
        1 gactttcaga taattatttt ttttttaata atatttaact ttaactgaca attaattaag
       61 gctaacatta ttggttaaac gtgactttca gcatggaggt taggcaactt tattcatgaa
      121 taaactccta tcttcctgcc taaaactgtc aacatattct tttgtttata gagaatgtgg
      181 tcttttgcaa aatgaaaagg taagagacaa aagctcagta acacaaattc aaactctgtt
      241 cccttgtacc ctccctagta aatatataga gaactgatag gtccgtttgt agatggattt
      301 ctgtgttgct cggagaaatg aagagttctg tgtctgacct ttctgagggt taatgactcg
      361 ttttgagaaa caatactggt gtaatttcca gctctaaacc gttatttctt ctcttgttga
      421 tgcccctttc ctccccttcc ctagtcaagg gt
//
LOCUS       KCKM01003056             829 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47935apa ultra-conserved element locus
            uce-1051, sequence.
ACCESSION   KCKM01003056
VERSION     KCKM01003056.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 829)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 829)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..829
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47935apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>829
                     /note="ultra-conserved element locus uce-1051"
BASE COUNT          271 a          141 c          180 g          237 t
ORIGIN      
        1 ctcacctcgg acttggaagc cagcataaaa agagcttacc caccaggtgg cattttctca
       61 catgtccagc cttaattcta acatgaattc tttgtatgta taattataaa accaagggct
      121 actacagtgc acctgtagag cagaaacttg actgttctcg attctgttct aattattgag
      181 ccttagagca aaaactaggt ttcaaagaaa actttctgta caggcctcag tagagttaaa
      241 ggagaaacat tttaagttga tgagctgaca cttgtagaag caaatatatt aaataaatca
      301 tgattcgttt tggggctaaa tctgacttac atcaactctg gaaaaactag atcctaatga
      361 gtgacagttt ggtgttttct gtcacttcct acagtaatgg ccccaagctg acactgctct
      421 gtgggagtct aatacttctg aacaaaagtt tttttggagt gagatagaca aggtagaaat
      481 cccaaggtga ctggaaggaa tgtctaatga ctggaaagac atatttactg gcagactgta
      541 tgtaagctgt gacagttgac agggcttgat tgtaataaat atagttgatg aagaggaggc
      601 tgacaggtga ggacagagag agaaaaagag tcaaaagatc tgcattggct gaaccctatt
      661 aatggtaagt tggtaacaaa gcccagagtc ataaaagaaa acaggtattg caaactgatg
      721 tctaaacact gaaatgtgta ggacttgcag gttgccgtaa caagctcaga tttgttgacc
      781 tttcttctag ttattttata agtggtattt tcagttgaaa ttcacacca
//
LOCUS       KCKM01003057             351 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47949apa ultra-conserved element locus
            uce-4280, sequence.
ACCESSION   KCKM01003057
VERSION     KCKM01003057.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 351)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 351)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47949apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>351
                     /note="ultra-conserved element locus uce-4280"
BASE COUNT           92 a           64 c           79 g          116 t
ORIGIN      
        1 aatacagcac tgaggccttt ttgttgttat tgcaggtgcc tctgttttga tttagagtta
       61 ttgttcagtg tagctcagag ggtgaactga gacactgaca gtgttgggaa tatgcctcag
      121 agacagacat atcagatgag ctatctgagc tggctatcaa ttgttaattg tctactgatc
      181 cttaaactag atacttaaac tgaaaagacc actatcagca acagatgtaa attacatgga
      241 tcttgtaggt gtgcaggccc tacagtctaa gtgggatact aaatttttca ttgcctgttt
      301 tcatatctag gcagttttcc tggtatgtgc ttgcaagccc gatgttgctc t
//
LOCUS       KCKM01003058             708 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47965apa ultra-conserved element locus
            uce-5903, sequence.
ACCESSION   KCKM01003058
VERSION     KCKM01003058.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 708)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 708)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..708
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47965apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>708
                     /note="ultra-conserved element locus uce-5903"
BASE COUNT          199 a          145 c          131 g          233 t
ORIGIN      
        1 aaagatttaa tgatttttct cctgactgtc ctaaaaagca aatgtaatat gcagagggaa
       61 aacctgcttg tatagagcag acatatttct gggcatctac gtagttagca gagggaggat
      121 gttcaattag tctctttacc acaagctccc cagtatgtct ccctctggaa aataggtgag
      181 aaattcttat attcctctca atatgttaat cagacaactg gtatcacagt tctctaactg
      241 tgtaatacca gtcccccttg gcagatatat tttatttgga taatgatgtg aaatttaaga
      301 tctacgtttc aattgtagag agccataggc agttgtcaat tttagtgaca gacatgaacc
      361 tggagctaaa ttcctgtgca caagcaaaaa ttccaacagg cgtagcgcaa ttctggtccc
      421 ttaatagaaa tatattttct cccattgagg gcagtatttt taaactgtgc attgcttctc
      481 ctggtgctgg cagatcagga atgctctcag attcttcctt ttccttggac agtttggtga
      541 cctcagctct caagaagtct gctgcaaaaa ctaatggtgt ttcagcctaa attgtccatt
      601 gttttagttc caaaacacta tggtatgaat ctcctgcttt tctttcccat tgttaaagat
      661 aatctcatca tgctccttca aatccttggt tttcctaggc agatatca
//
LOCUS       KCKM01003059            1076 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47981apa ultra-conserved element locus
            uce-4673, sequence.
ACCESSION   KCKM01003059
VERSION     KCKM01003059.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1076)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1076)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1076
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47981apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1076
                     /note="ultra-conserved element locus uce-4673"
BASE COUNT          293 a          221 c          224 g          338 t
ORIGIN      
        1 catattgagg gatggggaaa acagctgtgc tgtgccatat tctctaaccc aatgagaatg
       61 aaactcgctc tcagttttga gttttgttat tcccttgcaa aaccctcttc tgttgtgcta
      121 tgcaccagca aaagtccttt gtattgccat taaaaaggca gcagaggtgc ctataatttt
      181 attattatta ttatttgcac agaactcagc aaataaaaat gggtcccgga taaaaggtgt
      241 gtcctttcta gtaaagcaca aaaaaatctt aatctttggt ccagaagcag tagattgcca
      301 caaacagtcg gcagctaaaa tcattaatct ttgctgcttg cccaactggt actagtagta
      361 aagaagataa tacactagca gaatcagtga cccactacaa attggtcctg aaaggtccac
      421 cagcctaaat agacttttgc tgatccaaca cttgttagga atcccaacaa agagactatt
      481 ggctcatctg atgagccgct cactattggg ccttttgcaa tggctggtga tggatgacca
      541 taccctcttt gagggggaag atgcagctcc tggtatgggg ccttttctca tcttaaattt
      601 gtactcaata aatcacaggt gcagaagaga cagcatcagt ttcattacac ctacatgctc
      661 cagtatcaat catgccaaca caaggggctg cgtacagttc atttcgggag actctttctg
      721 ttccaatacc atttccattt cgttgtgctt tagcattcct aaagtgttga gccttcacag
      781 caaagcactg ggggagaggg atgggatgca ctgtaattgt gctctttcga cgtgagacag
      841 ggcttagctc aatgtacttt ggtttacgat gccttgctct tgttaaaggt aaatcttaaa
      901 cagtgtggta aatagtatca ctggttctgt ggtcatcaga catcactctt ggttttaacc
      961 ttgttttttc aattgctctt tgtcatagac ctttagtttg ggttgcagca atggccctgg
     1021 aatggtcccc ttttgtgatt ataatataat ttttctatct ggtttatgat aattgt
//
LOCUS       KCKM01003060             831 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 47997apa ultra-conserved element locus
            uce-7321, sequence.
ACCESSION   KCKM01003060
VERSION     KCKM01003060.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 831)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 831)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..831
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47997apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>831
                     /note="ultra-conserved element locus uce-7321"
BASE COUNT          269 a          170 c          140 g          252 t
ORIGIN      
        1 taatagaaat gttattgtac atttgaaaac agaacaaact ccagggatta tatcaaatca
       61 attccacaag gatttgtgtc cgctctaatc ccctattcag tcccaatctc attaacatac
      121 caggcttaat tggcatttca tccccacatt gtgtctccaa aatgaacaag gtgtaattat
      181 gttaaaaaga gcacttcaac ggttttagtt taattcatgt cattcatccg cgtcagaatg
      241 aacgcagatg ttctattgcg ggatacagca agagatgagc agctttgaaa ccacactttt
      301 tagctgaaaa ctttatgtta aaaaagttat ttaagtgaaa cgtaaaacac agtattttct
      361 tcttttgttt cagttgctat acaacattaa ctttcaaaag ctggttctgc ttaatttgat
      421 ttttcatttt caaatgaaca gctgtgttta agtctaaaag ccctttgttt aagcatacag
      481 agccccagaa aaggtttgaa caaagcatct tcctgtaaac acttgattac caggaaaggc
      541 ctggctttca aagtaatcta gggctgggtt tgctctaggt tctcttttaa aggaaaaaaa
      601 gttgcatcac ttctcagatg tcaaacaaca aaagcaacaa atgttttcct aattgcatgg
      661 gcttcttgta ttcaaggtag ataagggaag acagaagagg ggtttccaaa cagccatttc
      721 caaacacttt tcccccactc cccagttcca ggcacaaacg cacatgactg aaaaccacaa
      781 ctcattggaa tcgtctttta atcgtcagca aatcaaccat tttgtggtca g
//
LOCUS       KCKM01003061             923 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48013apa ultra-conserved element locus
            uce-6238, sequence.
ACCESSION   KCKM01003061
VERSION     KCKM01003061.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 923)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 923)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..923
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48013apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>923
                     /note="ultra-conserved element locus uce-6238"
BASE COUNT          260 a          181 c          138 g          344 t
ORIGIN      
        1 aataatgcaa ataactccaa cagtgtgacc atgcaaacct ctcaatttgt tttactttct
       61 tttagttata tattatacat gttgcattag tatatgcact gtttatttcc ctaattgtaa
      121 caagcactta attaattaca ctataacctc ttgaatctat aggccaactg ttgcgtcttt
      181 agttaatatt ttaaagtctc atctttttcc atttttcctc atgtctttga tgttttgttt
      241 cttacccttc ttgtttgggt tctcagtgga atagtctcag aataatcttg cagttctctt
      301 ttatgactga aactttgcat tttaacagtt gtctggagat agtttcttcc ttgtgaaata
      361 tcagttttaa taacaagaaa agaaaaatgc cataaatctg cactaaccac ataaagctga
      421 agtctccgag agactgatta acattgagac tctacacagg tttttcaata attagaggat
      481 gtgcttgcat ggagccatga ctgctctggc cttgatgcca tttcccaggg cagacagcaa
      541 ttattacagc ccacagtaaa tttcctactc tgcctccagc cactaaagat ctatttggag
      601 taaaggtctc ttaattttct atactcttgt catcagattg gattagcaac atgttctact
      661 tgtttttttc atttggttta ggaacaattg acagctgctt ttttgctata gtattttctt
      721 agcacctaag attgaagaga tctgaacaca gctttaatta tattaacata gtagataaca
      781 atcttggcat tttcatcagg gcagctacaa ccaaactgct tccactatct ttgagctcaa
      841 acgagtaatc ctcactcagt actcacaagc tttgtggtgt atattatata tatttattgt
      901 tctctgattt ttatcacctc ctt
//
LOCUS       KCKM01003062            1083 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48029apa ultra-conserved element locus
            uce-2830, sequence.
ACCESSION   KCKM01003062
VERSION     KCKM01003062.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1083)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1083)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1083
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48029apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1083
                     /note="ultra-conserved element locus uce-2830"
BASE COUNT          366 a          221 c          224 g          272 t
ORIGIN      
        1 aattttaaat ttcacagcgc ccaatccaat tggtacgctt tcaagccacg ttgctcttct
       61 aaaatacgga aaaattaatt acaaccaggt agtgccactg caaaacaaga aatgcttcat
      121 ataagtagat atacactgaa atggaaaacc aaagaaagat actgtcatca ggaacataaa
      181 attgttgaaa aattatttct aaggcccaat tcaccccaca caagacactg aggttttctc
      241 attgactctt ttggaagaag aaaacaaatt tgaaatatct gtataataaa gataattgtc
      301 aaaattaagc atggtcaaca tcacaaaatg taataagttt gcatgcatgc ggaatgtgtt
      361 tgaataaaac acattacaag gcacaaacac atggttttaa gtcaggcata gtccaatcat
      421 gataaagcta tttgcctaac ctttatagaa cttactctga taggaagtac ggatccgttt
      481 cgttaaatct ggataaaagt tagacaggcc acgcatgcaa aagttgtctt tggaacatgc
      541 cagtacacca gcatcagcag caggcagagg aaagagagaa aaaacagtct aaagtgaaag
      601 gaagtgatat cataaccagc atctagaaca gccaaggtga agaaatttca gcagatgctt
      661 accttccagt tgggatatat aacaagaaaa ataaaaacat aaagggtgtg ggatggatgg
      721 caagaaagca gctgaggctt tttttaggtg catagtttct atgagcaatc tagaagcggc
      781 tccttctcag cggccactta ttcccagtgg gcttcattct agcagcgctg cagaactgga
      841 acgctgtctt aaaggactgg ccaagactgt cactgacaca gagaaagcct gcgtgaactg
      901 tgcttgataa cagctatttc tggaccagct accctccacc tctcacacag ggctctgcag
      961 catgctgcac gtggcaagct caatttaatt tgggagctgc tgtgagcctg gctgaaccag
     1021 gcagagaagc tgaaggtagc ttagagcttc ttgtctcttc tctcctcagc tgtgcctaat
     1081 tca
//
LOCUS       KCKM01003063             956 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48045apa ultra-conserved element locus
            uce-4173, sequence.
ACCESSION   KCKM01003063
VERSION     KCKM01003063.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 956)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 956)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..956
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48045apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>956
                     /note="ultra-conserved element locus uce-4173"
BASE COUNT          313 a          171 c          163 g          309 t
ORIGIN      
        1 atgtgattat aatacaaata aaatctactt ccatgcatat atttattaca cagagtatac
       61 acagtctcta aaagtaaaat agtgtatttg tttttgtaaa agaaggcaca tccagcaaat
      121 gcagatgaac tttgtaatca cattcatctc agcattaaaa ttaaaaaggc agactagtcc
      181 ttaaaatcat gtttgaatta aaatttaaac caatttttaa atccttcctt taaaacccct
      241 aatggcatga aagaagtaaa tctggttgtg aatgccatta tgaatttcag agtctattct
      301 tggtgataaa atttgtatgc tgtgtttgaa caaactctca tgctaatgac attcctcagt
      361 ctggtgtctt caataataag caaactgagt ttttaaatgt agttgatggg attttttctc
      421 tctcagacac cctatgagga aaaacagaat tcccatttac tttcatgacc tctgatttaa
      481 aagcaaagat tgcacattat ttactactgg atgattttcc cgaaatttaa tgaggactaa
      541 gtacaaatat gacagatgta attatcacag ttttattctg cacagtcaga gtcttcttgt
      601 gctgtaattg caagcctttc attcagctgc agatagcaga gttattatca tagtacttta
      661 tgttatttca gaaaggaggg aaacagattt ctacctcgct tttaccctgc aaatttatcc
      721 ttaggactca ttttgcctgg catcatgcta cagtgaaatt aaagacctac aggaagaact
      781 cagacaaaat ctgttctgag tctcttcacc cactcccagc catgaggcca tcaatctaac
      841 cccagttttc acaacatatt ggagggaaag aaggtcttga gggggggtaa cattttttaa
      901 aaagaagaaa catgtgggca ggtggccagc ttattgtcta gcacagggat tttttt
//
LOCUS       KCKM01003064             492 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48061apa ultra-conserved element locus
            uce-1655, sequence.
ACCESSION   KCKM01003064
VERSION     KCKM01003064.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 492)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 492)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48061apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>492
                     /note="ultra-conserved element locus uce-1655"
BASE COUNT          147 a          102 c           70 g          173 t
ORIGIN      
        1 cagatacaca gctttgccca tagccactgt attccacaaa ccctttgaaa tatttcagtt
       61 tcatgtctgt gataattaaa gagcaatgac cttctcatta gcgccaagag ggctgatgat
      121 gattgttccc catttttctt aatggatgca agctacgcgc atgatcttag aatatcaaag
      181 caattctcca agatatttat tagagtcaaa attatgaaaa cacatagcaa acctttagtt
      241 tgaattacaa gtgttaatat atgcagaacc aaatgaatag ctcatctttc ttcctctctt
      301 gtatcttaaa tttttcatta caaatttcca gggcttcaaa gtagtatctc acagtcggtc
      361 cccttttttc tctcttgcat gacaaagagc tgtcaaaaat tgttcctgtg tttgttagta
      421 tttttctctt ttttctctca tctaaatgtc aaacaactta gcttaaataa agcacagcat
      481 tcttcatctg gt
//
LOCUS       KCKM01003065             969 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48076apa ultra-conserved element locus
            uce-374, sequence.
ACCESSION   KCKM01003065
VERSION     KCKM01003065.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 969)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 969)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..969
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48076apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>969
                     /note="ultra-conserved element locus uce-374"
BASE COUNT          305 a          185 c          179 g          300 t
ORIGIN      
        1 tataaatggt cctcacacaa aattctaaaa tgtgggttcc aaacaggaat gcaaactcag
       61 cagggcgacg gcacaagtag taaatgcaag catgtggagc agaggagtaa aagagaaaaa
      121 aaaaaaccca acacacagat gacaaaaaaa caactcgctt tgctgataaa tcaaccccag
      181 attcaatatg aatcatcaaa tttaatattg ccatgatcag tattcaagga aaatagatga
      241 tgccaaatat gctttaagaa aaaagaaatc tgtttaaata gtattaatgg taaggcatac
      301 tacagcaagg tgaacaacac tgataatatt aaattaaccc aagaggctcc ctaatcagga
      361 tccctacgca gaaatctgct tgccaactgt cgttcttttt cccattggtt tagttaaggg
      421 ttgaagttct tcttgaagtt tcttttttaa tcattagatc ccgaccttac agttttctct
      481 gactactttc cttcaggctg tctttgctcc tgtcaattta ggatttccag ggaattattc
      541 ttctttgaaa tgcatattcc gggcttgaaa tactggcata tgtacactgt agagtaattg
      601 tggaggccaa atgtttaatt acacatgaca gctggagctg taggagtccg aggcatgctt
      661 gaaaacaact tatgccctat gcagtcttaa cgaaaaggaa caaaataata tatatttagg
      721 ttttgtgcca catggtagcc gctgttctct cttttcacaa ctgagggtgg tttgcaagaa
      781 gttcagctgc tttcacttct gtgtactgtc tctctgaata tatactcttt ttttctcttt
      841 catacagtct aggcataaac ttttagccca tgcattcctg caagaaatgc tcagaatttt
      901 agttttattt ttcctgagtg tcagaggaca ggttttcaac agcttctctc atagagtgtt
      961 ttcgataaa
//
LOCUS       KCKM01003066            1124 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48091apa ultra-conserved element locus
            uce-3786, sequence.
ACCESSION   KCKM01003066
VERSION     KCKM01003066.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1124)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1124)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1124
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48091apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1124
                     /note="ultra-conserved element locus uce-3786"
BASE COUNT          282 a          257 c          293 g          292 t
ORIGIN      
        1 tgaagttttg caggtcttgt acgtgttgct gtgagaggct gccagcctct ccctccatag
       61 ggctgtggcc aagcgcagac gggacaaacg cgcgcggagg aggacgggtg acaccgagca
      121 cctatctcac cgctgcggag acccggatag tttttgactg aaattttgtg agccccagaa
      181 tagtgctgtc agtgtttaat gcttttctcc attagacagc aaattagccc taggctcgca
      241 aaccaaatga agtttcatct cgacaattgg agcctgctcg ccaggcagtt ttatcccaag
      301 ttcccgcaca ctggttggtc agcgaaatgg agactgcaac ttctatttat tggagcaata
      361 cagtatttga tactgctaat tacacttaat tagtccttcc accatttaat taaaatggct
      421 tctaatgatt gtgcttcttt ggcaggctct ttggtaccac cgggaattgt gctgcctgca
      481 gtaaactgat ccctgccttt gagatggtga tgagggccag agataatgtt taccatttgg
      541 actgctttgc ctgtcagctc tgcaaccagc ggtgaggaca caaacacaaa ctaatttata
      601 cctttaccca caaaacaggg ggaatgcttg atccacactc cccatctggg gttcacagcc
      661 cactggtgtg gcttgggctg gtttattagg ctgacctggg tgatgcatgt aagtacctga
      721 agccccttta ccgcaaatcc ccttggagct ggtgggagtt ggaggggaga gggggagcac
      781 agagactgca gatctggcca cggttgtagg cagcacagct gctgctgaat aaaacaaact
      841 gcttcagcgt cctttcagga tctgccctct tagcagaaca cagacgatgg agcatggacc
      901 ttctctggca aaccagtgtt attctgctga aatttgattt ctatcaggct cagaactggg
      961 gacagcaaag aagaaggagg aagagaaggg agaggaagga aaaaaatact ccagataagt
     1021 cctttccaac actaggaaca aattcccttt agttgttgtt agtagggtgt cctggtggtg
     1081 taattctgag cggcacttgg gtacttctgc tggattttac gcag
//
LOCUS       KCKM01003067             303 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48107apa ultra-conserved element locus
            uce-6551, sequence.
ACCESSION   KCKM01003067
VERSION     KCKM01003067.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 303)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 303)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48107apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>303
                     /note="ultra-conserved element locus uce-6551"
BASE COUNT           95 a           76 c           42 g           90 t
ORIGIN      
        1 gggtgctgct cctcccccac ccctgtggtc cttcacaagt ccccacacct cgtgatagat
       61 ttcataatta ttcagtcctt actaccaatg ccaaaattca tcactcaaag caaattagcc
      121 gagattcatt agaataagac atctagtagg cacatgtact ttattagcct cttacaccaa
      181 tagttttaat taggtacata tttcacagct ctagagctac tcgagtgaag ggctactttt
      241 atctctttta tttacagtaa caagctatca aacaaatacc accataatta aactgagatg
      301 caa
//
LOCUS       KCKM01003068             527 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48123apa ultra-conserved element locus
            uce-7456, sequence.
ACCESSION   KCKM01003068
VERSION     KCKM01003068.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 527)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 527)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48123apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>527
                     /note="ultra-conserved element locus uce-7456"
BASE COUNT          164 a          104 c          112 g          147 t
ORIGIN      
        1 gaaaaaaggt aattgtgctg caaacgctga caggtttgac agaaagtgtc ttcattgaga
       61 aattgcattt tgaagttctt cccgttcctt cagaaataaa tggactaaag cgccagggct
      121 ggctctgaca ggaagcgggg attcaggact tcaaatataa acattatgaa aaacaagcaa
      181 catctgcaaa cagtaagtac ttatttatat tttatggagt gtgtgcttgg gattttgaca
      241 ggtttttaaa cagagcctat attaggccca tacaaaggcg agaatgtccc tttttaaaaa
      301 tacattatgc tgctgaaaag cagactaaat ctgcagtcca agcctcaggt gagctctgac
      361 ccctcctaac ctggtctaac aaaacacaca tgtggtgttt gcaatagaac agtttactgc
      421 tactttctca aggtcaggac aagacagaca cttgagggtt agtattcagc aagcttttcc
      481 ctcagctgcc agagtggctt tgaacttttc ccttttgaac aaatagg
//
LOCUS       KCKM01003069             487 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48139apa ultra-conserved element locus
            uce-3157, sequence.
ACCESSION   KCKM01003069
VERSION     KCKM01003069.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 487)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 487)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48139apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>487
                     /note="ultra-conserved element locus uce-3157"
BASE COUNT          152 a           82 c           92 g          161 t
ORIGIN      
        1 aagtctttgt atctagaatc tgctgggtgc taatttgaca tggcaatgag attaaagttg
       61 gattcatgct agtttcaaca tcagaggatt ggaatgcaac ctgcttagca tagaagtcaa
      121 gcaattcact ggcaatagat tgctttccac ttctagatct gctaaataaa tagaaaacta
      181 attaacagtg cagtatggca gatgtagcag gtttgaattt cattaaagca ctggctaaga
      241 actgaaagaa tcaagaagtc gttatatgtc ctagtgtcta atgaatcttt cacaccgtct
      301 tttccatgag acaaacaaga tactatttat gtgccctctg tgcaagaatt tcccgatgca
      361 tttccactta aaataagaaa gaaagtgtaa gcccttgaaa ttattattgc aagtattctt
      421 ttcatttttc ataaagttac tttggttctg aaacaggagg attgtgtttc tttgccttgt
      481 gcatttc
//
LOCUS       KCKM01003070            1063 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48153apa ultra-conserved element locus
            uce-6548, sequence.
ACCESSION   KCKM01003070
VERSION     KCKM01003070.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1063)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1063)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1063
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48153apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1063
                     /note="ultra-conserved element locus uce-6548"
BASE COUNT          348 a          164 c          192 g          359 t
ORIGIN      
        1 aaatatagag cgatacttga ttagcagaga tgatgtaatt tgtaacttaa attcaagcga
       61 gaggtagaaa tctagaattt ccatccagct tgaaaacaaa caaaacccaa gccatcgtcg
      121 ttgttttgaa tggtaaagta atcgtaaagc cttagccagc gttttctatt tagaacaaaa
      181 ctaattaaaa ttgacaacat gtagaatgac tgtgatttgc acaacgtggg atgttttgca
      241 gtatgctaga taataaaagc tgttccttac ttaaagtcaa gtctagatta ataatcacaa
      301 agtaattgtt ggaaaactgt ttgaacttta aatcttcata actgaagcat ttgagtcatg
      361 caaactggta ggttagtgac tagtttcatt aagacaaatg tgcaggaaga tttttttttg
      421 tattctactg ctttgaagtg ttttctgttt cttcattgct tttttgtttg caccatttat
      481 tccagcagga ttctcatttg cacccattct aatagtgctg ctgatctcta cataaaggat
      541 tatttacatc catatgtaga agcaggcaat ccccaggcaa gacctctcag gtatttttta
      601 aggcttatta cgtatctata acatactatt cttaagaaaa ggtgtctata aaaaaggtta
      661 acgaactttt aaaacataaa agcatattgg cgtaccagca gtgcttttaa agacatagac
      721 taaaaggaat gtgaaacatt atcaaaataa tattgggtca tttgtttaat aaaaataaag
      781 acatcctttt ttaagctttt gttattctct tgataaatgt gtctttccta atgagcaagt
      841 ttttgatatg ctcctctaaa agctactatg ataacataaa atggacttga attgtatttt
      901 aattccagaa gaattggaac cacattaaca atgataattt ggaaactggg gctactaccc
      961 acttggcttt ttgaagaata attctgatgt catgggagct acgtatttag agaatgatgt
     1021 gacggtagtt tggcctcttc tgacgagtca ctgtgtctgt ggg
//
LOCUS       KCKM01003071             592 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48169apa ultra-conserved element locus
            uce-4820, sequence.
ACCESSION   KCKM01003071
VERSION     KCKM01003071.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 592)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 592)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..592
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48169apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>592
                     /note="ultra-conserved element locus uce-4820"
BASE COUNT          158 a          141 c          112 g          181 t
ORIGIN      
        1 atgatgttca ataaccaata ctctatccac cctcgtcaaa ctaaaatctt tttttcaagt
       61 ggacttgcaa aactctacat tattttcaat cagctacgcc tgttgtgtca catcatctgc
      121 atgagatgga tcacataaga agctacagtt agtatcttaa aatgtgaaat attttcacgt
      181 ccctgtcagc ttacctggct tgtaggttat tcctgggggg aagagaaatc cctgctgggc
      241 tgcagcagcc gctgccagtg tccgctggtc gtgtggaaaa attgggatca tgagcggagg
      301 catgtgaccc tgaacctgct aaacagaaga gagcctctga tcagaaacag cacaaatttg
      361 tcttgacagg tatttctcca gcactgatag tgttcttgtg ttcacagtcc cacagaacct
      421 tcgccttaat gtaatccctg ccaaattcac attatcacat caaagccctc actaacattg
      481 ttttcccgca gtgtcaaagg tgtaacagtc tcagtgaact gcacgttttc ctaattcttc
      541 ctggttctct tttttttctt aaattaatat tctctgtcct ggcacaaggt aa
//
LOCUS       KCKM01003072             735 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48184apa ultra-conserved element locus
            uce-1545, sequence.
ACCESSION   KCKM01003072
VERSION     KCKM01003072.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 735)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 735)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..735
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48184apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>735
                     /note="ultra-conserved element locus uce-1545"
BASE COUNT          203 a          146 c          146 g          240 t
ORIGIN      
        1 acaacagaga tgctctggct tgattttaca gggatgagtc tcagtgaaac tctgaaataa
       61 atggtaacgc caaaggaaaa tttcttcact gttgtcaaac tgttcagaaa gcgttaacat
      121 ggttcattca ttttcagctg caatactatg ttgaaaacat atttttgctg gtctgcagtt
      181 gattgatgta cattactcat atcaggctaa tggcacttta ttttccaaca gtagcaagta
      241 atgagtgacc ttgagagcat attgttttgc tgaaaggttt tgttgctcca tgtactctat
      301 gagcaccccc aaggaaatga gggccctgta ttagtgtttt tcagcaaacc tcatttcttt
      361 catggctttc tgtaaaagaa tttgatacag ggatagaagc taacctcagt gagtaaatga
      421 aatattgatc cacactactc tggccttgcc ttcaccttgt cccagggctg tgagttactg
      481 acttttccgt tttggctgta ataggaatta ttacaacagg cctgtgcgag taattacttg
      541 gcatggcaaa aaggagggtc catcatatat ttctgtagag acgttagttt tcatcagccc
      601 agcagtctgc ttttttggcc ctgtctttct tactcttgat tcaattcttt taaccatcat
      661 taatcaagct ccccgtcagt agaagtttat caaaactatt aagtgagcaa ggttgcatgg
      721 cccccttgca aaaaa
//
LOCUS       KCKM01003073            1024 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48199apa ultra-conserved element locus
            uce-4309, sequence.
ACCESSION   KCKM01003073
VERSION     KCKM01003073.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1024)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1024)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1024
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48199apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1024
                     /note="ultra-conserved element locus uce-4309"
BASE COUNT          344 a          210 c          205 g          265 t
ORIGIN      
        1 aagggagtga gcctggctga agcggtaaca gaatttctcc acgtgaattc tgcaggaacc
       61 ctacgggaag gcaggcaggc agccctacgc agaagccctg ctctttcact taggtggcac
      121 atctgtcttt caccgcattc aacagactgc cttggagttt taaaggacag aaccaaaacc
      181 cgcttctgca tctgaaatca agcacataca tttagccctt tttaagacct ttagaaataa
      241 ttccacaatt taaacaagcg ccacagggaa acatcttagt aatgttacat gtttgccaag
      301 tatgtctgaa taatgccaac ataagaggtg cttttgcaag gtctacattc tccagaagaa
      361 aaaacaaaac aaaacaaaaa accaaaacaa aaataaagca catgaatttg gggttgaggt
      421 tggaatagga gacagttcag acctggttta atcctgagaa agatgggtcc tgagaagtac
      481 taacagtcat gcttcttttc ctcttcccca ctggagattc taaacactga acaaacaata
      541 gagggtggca gtgcatcaaa cagtattgct tacattgcaa caatggccgg cgcagacagg
      601 caacaccgag gcgttcgaga aagaacaggg tagccaaatg ccatccttct tccatcaagc
      661 actgtacttt tcaaaaaaac tatgtttttt aaattatttt aatttttttt tccgaggaga
      721 aaatttgaaa gatgtgacaa ggtaaatttc aactgcgagc cactctgaaa tggcactgcc
      781 ttgaccaggg atagcaatgg tgacatttgg ctctattaaa aaaaggaaat tgatgttttg
      841 cttacaaaag catcctttgg ttccacaaac tgcccttccc ccaaaagaca tttagaaaaa
      901 gtaaatcttc agtaaggaag aggtagaagg catttagtca ccttaaagtt tactttcata
      961 agcatgcagg gcttatttct agcagagcta aaaattaatc ttttaaagtg ggagcaaaat
     1021 ttct
//
LOCUS       KCKM01003074            1017 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48215apa ultra-conserved element locus
            uce-4618, sequence.
ACCESSION   KCKM01003074
VERSION     KCKM01003074.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1017)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1017)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1017
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48215apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1017
                     /note="ultra-conserved element locus uce-4618"
BASE COUNT          222 a          292 c          285 g          218 t
ORIGIN      
        1 gctgcacccc gtgctgcaga cctcgagtgc cccgtcctcc ccggcacctc agctgccagg
       61 tctccagtgc tgcgaggtgg tttcgtaaga aagcgcccgt gggtgagtta ccttggcagt
      121 tagttttagg tcaggacctc agaactgtag cgtccctaga aatgcagctc ccacaatttc
      181 acgggtgcgt tcagaactgc tggaaatcta aagctttctt tgccaactgc ctccaggccc
      241 ccgactgcca gtgtcccagc agaccgcccc cagcctaggg tcttcctctg ggtactttac
      301 actttgcctc tgcgtgtggt gctcgtccgt aacgggtggg tgtgtgggag ggttctgctg
      361 ggttgcgtta agtttcccgc tacgtacttc cccgctctag gccctgacta agacaaagtg
      421 cccaagaaga agtgaatatg tctattgacc gattgtaaag gtgagagagg atctccaaag
      481 cccattgtca ctgctgccat ctgaaagaca gtaaagacag agttcagtct gttggagctg
      541 agcatactac ggctgtttgt aaaaactcaa gcagagcggc ggcacgggga acctgcgaga
      601 gaggcctctc cttccttgcc cctcactgcc tggtcccaag gactgtccgg cgccgggacc
      661 ctgcagattc cagtcccacc aggccagggt ggagttgtgc tgctgccact gcctcgggaa
      721 gcagggtctt ctcccggggg ggactcaagg caatagtaac ctctgcaacc actgtcgttg
      781 attcaccccc agcgtttaaa aaggagcccc tcaactacat cggacactca gaaacacgca
      841 cagccctgaa cagccagagc tgccccgtgg cgagcacatc cacagtgact cttggattaa
      901 aaaaaatcca ggatcccaag gccgttactg tttggggcgt actccctcgg ggtagaaggc
      961 agtgagctgg gttggagaaa cctctgaagg gagggaggct taaacgcggg ctaaagg
//
LOCUS       KCKM01003075             802 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48231apa ultra-conserved element locus
            uce-7063, sequence.
ACCESSION   KCKM01003075
VERSION     KCKM01003075.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 802)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 802)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..802
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48231apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>802
                     /note="ultra-conserved element locus uce-7063"
BASE COUNT          221 a          141 c          198 g          242 t
ORIGIN      
        1 ctttctttgt accctggagg ctgtgaaggg tagtggagag agcaagcaag gagacctaca
       61 gacaagtcat gcttgttttt ttttccagag cctcaacaac agaactgaga ggcagaaagg
      121 agccagttgt aattcatacc gagttgtagg ctttgtgtga tgaaagcgac ggagcgctgc
      181 ctgggagatt gctttgctgc actccacgaa gcagatttga aactgtcgtg gaccacttta
      241 gatgagagtt ggattatgga atgacctgct atgtctgtgt catattgttc tgcgcagggt
      301 gcattatact gtgctaacta ggtgttcagt accaaataag agaggtgtcc tagatgtgat
      361 ctgtcagctg tgtctcatat ttttatattg gttaaaatat aaaactgaaa cagtgatgag
      421 agaggacaga gcagttggat gccttgtatg ttaacaataa acccggactc agagtattta
      481 aagtgtagca agtctttttt aattactttg agaaatctgg cattacttat gtttttttaa
      541 accaacaaat gatgccctac aaaaaatgtg gctccatgtg tttgtgcctg caacaaagca
      601 agcagtttgt actgctttat acgggcagtg cattttctct cattaaggat ttgtggtgtt
      661 aagtcttgtg tttcaaagag ctggagaagt tcacaggcag tacacttgag aacccgttta
      721 aaagcatctg aaaaaggcca agcttgctgt taactttgtt ttttcctgct gccctaggct
      781 tgaagatgca gtggacgcca ga
//
LOCUS       KCKM01003076            1128 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48245apa ultra-conserved element locus
            uce-4837, sequence.
ACCESSION   KCKM01003076
VERSION     KCKM01003076.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1128)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1128)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1128
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48245apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1128
                     /note="ultra-conserved element locus uce-4837"
BASE COUNT          363 a          199 c          235 g          331 t
ORIGIN      
        1 atacgtattt taaaaacttt atttctagag acttattaag ggattaaaac caagcgagag
       61 gagagaagac agttggtaga acagcataaa tcataattga aaacatcctg gtagtataac
      121 agcaccagac attttgaatg gtttgcgagg ctctgcagag tgccacagta gtatgggttt
      181 ttaacatcct gctcagtagt taaagggtat tcaacctgat ctgcctttgt tgatagctga
      241 tattatttga cattttaaca aggttctgta tttgcagaag catcttatgg caccactttc
      301 aacatcagag tctatcacaa aaaacatttt aactgttttg caaacaaact ttcttccagt
      361 taataattaa acagagaaac agcttgcggt atatgcttgg aactaatttt actatatata
      421 gttggaaatg acaagagcac atgaagatgt gactgaagcc tggtagcatt taaatactcc
      481 gtacttcctc tgttaccttg actagtgtaa agttggttcc caaggtaaaa actaagtggt
      541 ctgctggcat atggtataac ctccatttga gcgctaaaag ctggatactg tttttgtgaa
      601 acagatgttg ttgagtgcag caatgcacaa ctgactctat ctaacagctg ggaatccttc
      661 gtgacccata tagctaggaa taaacatggt cctatgcttg gcaaaagtgt aaggaagcaa
      721 attttcattt gttaagggct tatcaaaatg aagaataaat gtttttagcc ataaactgat
      781 tttattcaca agagtaatct ttccagcagc ttatgcgatg gcctcataat attacaggca
      841 ccctttgcca gatgaaggct gcagttgcac tgacatatag tgcagatgga aaataaacat
      901 ctgcctcaat caagagagaa gaccaaagac aaggttgacg aatattatct ggcaggacta
      961 tctttgcagg aaggcatata aatgctacag gaccaaaacc actggcatcg tctggtgttg
     1021 tccttatgtg gttactgacc atgaagagag atgattagta tgcactctcc aaggaggagt
     1081 agtgcagatg ctcaggatga tatgattcca actcactagt atgtgttt
//
LOCUS       KCKM01003077            1047 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48261apa ultra-conserved element locus
            uce-1281, sequence.
ACCESSION   KCKM01003077
VERSION     KCKM01003077.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1047)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1047)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1047
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48261apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1047
                     /note="ultra-conserved element locus uce-1281"
BASE COUNT          325 a          195 c          160 g          367 t
ORIGIN      
        1 caccatatta taattctgaa tgagcattgg gaattttttg tttcaataat ctctaaacac
       61 aaaaaagggg ggaaggagga ctcaagaatg tctacatctt cacaagtaag gaattgattt
      121 ctgccaaact atcccattca gtttgggctt gttaacattt taaatattag ttctaaatat
      181 tcatttaatt agagagcact gaacactatt tttgcagtat tcctttctga cagaggctct
      241 ttcttaggag gtcaaggaga tgtgtggaaa atgctctata tcaatagagt acattagctt
      301 atttatatct gagaatcatg taaaaagtat tctgactctc tcgttgctag atataatttt
      361 aatatactgt attgagcagt ggtgtttcac tagaaattta acaatacctg gaataaataa
      421 tgtcttttgc agcctggggc aacatctgcc acttatgcat taattctgcc cctgtttgaa
      481 cactctacaa catatgcact tctcttttgt ctgttatccc agagttgtgt tattcccaaa
      541 tattgacatc atctactttt atcagcacta actgctctga agcttcctag tctcatgctc
      601 agctctattt ctttctattg attatcttcc tcactccagc aggtagctag ccagcgaggc
      661 tgtcctgaga aatagcttcc aatgacttta tacgcacaat ttacacggaa ttgtttaaag
      721 aagatattag cctcaataca aatcagtgaa cctcatttag tcaatactgc acaattcagc
      781 tgttggcacc ctgtcacatg ttagtcttta aagtcaacta ccatacccaa tctgcacatt
      841 agccatagta tttagtttca tattaaaatg aggctatttt ttcacttttc tttttgaaat
      901 ctattcaata tactttttac atcacctcat tgaaccatat gatagtaata taattttaag
      961 tataaaaacc tgagattaaa tgcttgattt ttgacagtgt ccttaaatat aataaattca
     1021 aagggaaata ctgttaagtt aaaatgg
//
LOCUS       KCKM01003078             450 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48277apa ultra-conserved element locus
            uce-3223, sequence.
ACCESSION   KCKM01003078
VERSION     KCKM01003078.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 450)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 450)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48277apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>450
                     /note="ultra-conserved element locus uce-3223"
BASE COUNT          168 a           81 c           66 g          135 t
ORIGIN      
        1 tagaagtaca cagaaaaata ccagagtgac atgactatat ctgggtgcct ctgctataaa
       61 aagcatttgt attatcctta cttatttgaa taaattcaaa tgacagcccc atttcatttc
      121 ttcattcagt ctggaggcca gatggcatta gaatcattta cttcaccttg ttgtgcttaa
      181 ttacgacaat caacacacta ttttccaaat taatcataac aaagtaattt cattagtaac
      241 acagcaggct gttgaattat tagcatcata acagtttgca aacaattaaa ctttatttga
      301 accttaaaaa tttgcagagt agaacattat tgtaagatct aatggcagta tagtacaaat
      361 ccagagagag caaataacca aataaaacgc cgtacaaaat acgagttaca atcacctttt
      421 aaaaaaatag cttactcttg gtggaaaggc
//
LOCUS       KCKM01003079            1107 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48293apa ultra-conserved element locus
            uce-1192, sequence.
ACCESSION   KCKM01003079
VERSION     KCKM01003079.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1107)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1107)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1107
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48293apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1107
                     /note="ultra-conserved element locus uce-1192"
BASE COUNT          346 a          240 c          185 g          336 t
ORIGIN      
        1 ttttccacat cacgcaatta attttaatac aaagtgctgt cagcaggcaa ctccgccaga
       61 tacagcataa gacccttaag cacaataaaa caaataattt aagtcacagg ccctttgaaa
      121 acttaatgga tctgttgtat aaacatcctt atcacagaac taatggcata aaacctgttg
      181 taattacttc cacgtactac ctactatcat atagtaggta gatgaaaaat atgtattgaa
      241 agatttttat acccaacaga cattgattac aaaaggttac gtatctatat ttatcacata
      301 aaatataatt tggtaatttt acgagaacag tatagtttat cccctgcagc acataaaatg
      361 caaaatgtaa ttattattat cttctgttcc ctcttccttg catagcctat gccttcatct
      421 tttttgtttg tttgtttgtt tataaaatta atcacagcta gcagggtgga aatcactttg
      481 agcctcatga atgacatcca agagatggga aaggattagt tctcagttgc tgccagttat
      541 agcgccaggt ggctttttct gcagtgaagg tgttaccgat aatcccatta cattggtact
      601 aaatcttgca gacatcaaaa ttatcaccaa ggttcctttt catcccatcc tttccaaatg
      661 actggaagtc gcttcacctg aaagaagtca aatccacatg cagctgctgt tttagcagcc
      721 agcagactcc ctgagaatgc caatcgtgat ccaatttcgc tgtgctggtg gccccctatt
      781 ccctgtccaa taatacatct gttaaaaaat cctacagcta caaatcaagt ttaatcctac
      841 cagggacctc atgttggtct tgtcttccaa aaaggcagca ggttttgccg tctatctctg
      901 ctagtgtctg gggaatactc tttaaatccc agccctactt agaagaataa gctaaggatc
      961 acaaaacatg acctcagaaa ccctgatatg actatattct gacccagagg cattcattct
     1021 aggtgaagat tagaactttg cataataaga ttacacagca agtgaatgat atcaagggac
     1081 tatccatatg cagccgcctg gttttct
//
LOCUS       KCKM01003080             523 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48309apa ultra-conserved element locus
            uce-1374, sequence.
ACCESSION   KCKM01003080
VERSION     KCKM01003080.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 523)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 523)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48309apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>523
                     /note="ultra-conserved element locus uce-1374"
BASE COUNT          163 a           86 c          109 g          165 t
ORIGIN      
        1 catgacatga tgtctcctta agtgtttcat ttttaattaa gaaattagga aacaagacat
       61 ttaagaaatt tgataaaaga tatcattagc tgcaaaataa cacagctctg agatttgaaa
      121 tgttctactg gagctctgga gctggagaca gtcatgttct tgtgatattt cagtgacaat
      181 ttctatttta agtgtcaaaa acaaccctgc tatctggagc aagtagtgta gtgttctctc
      241 cttttaatat tctaatcgtg aggtgtaaag tgaaatggtt gcacagtgta atggtggtaa
      301 agaagctgag tgtcaatgag acgggaaagg tgacagacat ggaatgagtc cccaaggtgc
      361 tctgcaagtg cattggataa agattcccct gggaaatttt tctcattagt tctcagacac
      421 agttcagtaa ttcaatagca ccaggttacc attagtcaca agaccaaaat atgttacttc
      481 ccatgcttta gctccttgat ttgtatatgt cattttacaa ggg
//
LOCUS       KCKM01003081             603 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48325apa ultra-conserved element locus
            uce-545, sequence.
ACCESSION   KCKM01003081
VERSION     KCKM01003081.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 603)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 603)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48325apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>603
                     /note="ultra-conserved element locus uce-545"
BASE COUNT          203 a          106 c          106 g          188 t
ORIGIN      
        1 gcggtgaagg aataaatggt ggtagttgga aaggtggata acgcagcgat tctttgctct
       61 ggcaccccct gcaaaccgct atcgcttcag tcaaacgtaa tttgattata attttttttt
      121 tcctgctacc gtacattaac agggcaaata aaagggaaaa tagtgcagtc ccttgtaata
      181 aagaaaacag cagcaaacta ttaatgctct ttgaaaagag tagttttaac aaagtaagca
      241 agaatcattt tctttggttg agtgttgatt ccctagtgtg ctctcagtaa gtaattagaa
      301 tggcccagtg aatgtcagca tcagcttgtt tattctcatt attttatcat tttaaaaacc
      361 ctctaggtga tgagacatgc agtatagaac ataattacca ttattagcat actaattgga
      421 cacaaaaata ggccaactac aaggtagcca actgaataat ttcacattaa tcaaacacca
      481 tagtgaataa gcctattgtt aaattgacag ctacaataat tggcaatatt tcgctgcgaa
      541 gtataagaaa ttccttgtaa tatctctgca acgttatata atttagtaat ttcccatatt
      601 tcc
//
LOCUS       KCKM01003082             566 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48355apa ultra-conserved element locus
            uce-3940, sequence.
ACCESSION   KCKM01003082
VERSION     KCKM01003082.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 566)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 566)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..566
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48355apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>566
                     /note="ultra-conserved element locus uce-3940"
BASE COUNT          180 a          125 c          126 g          135 t
ORIGIN      
        1 aaaaaaaaag agaaagggag agagacattt tctttcacac aagccctcag aattacagtt
       61 catgaactat tcagtaaact gaccggcatg aacctccctt caacggccta atctaagggg
      121 tggatctatg tgttttgttg cttgtcaaaa acaatcactg ctcggcccat tacatttaca
      181 gcacgtcgtc ctttaattgg tgtaacacac tgagggctga aaggaagaaa gtcctacaaa
      241 agcccccgag tgaatgaacc ctgactcaca caaaaatact cttcagaagt tcagagctgg
      301 gcactaacaa gggaggtaga gagttagttt gaaaaggggt taagttcaga aatgtgccac
      361 cttgaagacc ctcccatcaa agccatgata gcattgacaa gatgcagggg gaaaaaagtt
      421 aatattccag cctttcgggt ttgaagggaa ggcacagagg ggctggagat tcctcccggc
      481 tcccctttcc cgatctaacc cttttcactt cggggtcgtt ctcattgtgt ccttcgactg
      541 cttaagaaaa atatgaaaga aaaaaa
//
LOCUS       KCKM01003083             824 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48369apa ultra-conserved element locus
            uce-6406, sequence.
ACCESSION   KCKM01003083
VERSION     KCKM01003083.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 824)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 824)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..824
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48369apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>824
                     /note="ultra-conserved element locus uce-6406"
BASE COUNT          285 a          167 c          148 g          224 t
ORIGIN      
        1 ttcctatatc aataaaaagt gtactttaca caaagaaaga aaacctgctt aagaaaatgc
       61 tagctaaact tactgagcat tttaacaatt atcataaaaa atgctagaaa agaaaatata
      121 gatatgttaa gcaatcctaa aatcttctta aaccacacat tgtgctttcc tacagagaat
      181 tttaagatga aaaacagacc ttgagggtct tagacaagcc tgaggcaata taaagaaaaa
      241 ggtcaaacac tctgctaaaa aggaccgtta tcttcagaac aacaacttat cagccagctt
      301 gcagccctgc ttatttacag ttattggtcc cagaggaagt gcacttcagc acggggcgcg
      361 attactttgt aatgagtttg ccagaaatgg taaaggaaac taatttgtaa caatgtgctg
      421 ttccctgcac atgaactttc tcagacactt ttttttttgt ccatcaatga ataactaact
      481 tcagcctccc taataagcag tgaaaacaga agtgcactga aaacaactga gtggcaagca
      541 tgaatgtgct gaaatatcag cgattatccc tctcagctgt ccattacagt actcatgatg
      601 gccaccaatt cccctgtggt ggatatatag aatgcaggtt tcagggggtg gatttgcaca
      661 tgaaaattaa caccatttgg aagaaaatag cctgcacctg tcacagatta gcaacaaaag
      721 gtcaaatgcc tccttttaca cctacagcac ttgcatattg tgtgccttgc ttataggagc
      781 ctaattctag tttcttaatt cagaagagtg agcaccacag taaa
//
LOCUS       KCKM01003084             891 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48385apa ultra-conserved element locus
            uce-2259, sequence.
ACCESSION   KCKM01003084
VERSION     KCKM01003084.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 891)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 891)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..891
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48385apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>891
                     /note="ultra-conserved element locus uce-2259"
BASE COUNT          305 a          150 c          177 g          259 t
ORIGIN      
        1 atcagtgcaa caacagaaaa gtaaaatttc ttcacaaaga ttaattggtg gctgcgcatt
       61 agagagagct gccaaaagct agtaaacttt gttagttaca aagataaagt gtgagaggaa
      121 ggagcagaga tgtaaatgtg tttcaaaact ttttatcatt catataaaaa agcagagtga
      181 cacagagcaa aaaaaaagag gatacagatc agcatgtttc ttagatgata gccttttaaa
      241 atggaatgaa gtaatgttat taacccccaa taatattctg aaaggctatc ctagcagaat
      301 gtacatcagc tgttagatta cttcattcct ccacagcagt tgttcatctg aaaatagctt
      361 tcaaattaaa agaggcaact acaaaaggat tagttaccat aggcagcata atactcccac
      421 aagattattt atgacaaaac acccagagac aaagctgtaa gagagttaaa ctctatgatt
      481 taaaaaatgt attagggagg gctagaggac attgcatata gagtaagctg ggttcagcgc
      541 tataccattt ctgtgtattt catccataat ggctgatgct tgttgtttcc tctctttgac
      601 catggcagaa tctgataaca ttgtgatttg ctgatacgat ttttccttgc tgaaaaaaaa
      661 caacacattt tcacatcacc gagccagctt gcacaattca gccaacttca gtttctaata
      721 ttcttttaga atggctgaat agtgaagtta gttatttctg atgtagaaag actgcacttg
      781 taactgtgca aaatgcactg gcagttcctg cttgcagaca gatgctagga cattctgatg
      841 gatagaggat tcgaaggaat gtactttgac ttggctacgt gaattctgta g
//
LOCUS       KCKM01003085             816 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48400apa ultra-conserved element locus
            uce-7055, sequence.
ACCESSION   KCKM01003085
VERSION     KCKM01003085.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 816)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 816)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..816
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48400apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>816
                     /note="ultra-conserved element locus uce-7055"
BASE COUNT          230 a          216 c          223 g          147 t
ORIGIN      
        1 accaccaaaa acgtgtggag aaagggaagg tggggggatc tgttgatcct tgaggggtcc
       61 ttgctgtctg acctcccttc ccgggatggg tgggagcagc gggggacaac agggatgtca
      121 agagcacctc acgccgcaca tgaggcacac gatggccacc agcaccaagg gtcctcattg
      181 ccacccttgc ctcgggcaca caggggaggg gtaatgcaag gaaggcacga ggagtgaggc
      241 cagctacgga gagaaatcgt caccgaggca aagcacgtgc cggccacgtc agctgggtgc
      301 agggcatccc ggagagccca ccgaggaagg aaagcagcca gcagtcagga caggaaagcc
      361 accattacat tcgcagcgtt cataaactct tactgtcagc cagcgagtac cttaatgaac
      421 gtttccatat tgccgttaaa gagtttatga ttatagactg agagaggcct aggtctcctc
      481 attttctgtg gcttaggggg aagacatggg ggcctgggag aaaatggaac aaaataaatc
      541 aacaaaaaca ccaacataaa tgcaatggca gggtgaaatc tcaaaggtta agaaataaat
      601 tgaacagaaa atctcctctg tgaggactca acatgcggct ccaggcactc aggcttcagt
      661 ggcccccccg cacccctccc cagtcacggg ggaccctcgg gtgcgctccc ataaccgtgc
      721 cctctgctca ccctgaagcc ccgaagtcaa ggtcaagacc gcctttattc aagtaataaa
      781 ttcaaattaa tcttgccaac agcagcattt aacagc
//
LOCUS       KCKM01003086            1076 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48414apa ultra-conserved element locus
            uce-591, sequence.
ACCESSION   KCKM01003086
VERSION     KCKM01003086.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1076)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1076)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1076
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48414apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1076
                     /note="ultra-conserved element locus uce-591"
BASE COUNT          371 a          182 c          253 g          270 t
ORIGIN      
        1 agtaaggtta tgagaccagt tagaaatcag attactaatg ggctctccat gaaaacaaat
       61 acaaatgcaa gacaaccgac aaaacaaatg agaagtgaag gaaagtgaac cagagttagc
      121 atttcatcag aaataattat gaacaggcaa tgttgagggg agcaaggtgg gccacaaaaa
      181 cagagcgaga gactattttg aaacaatttg atttacaatg cagcaaatat gcaacacttg
      241 aagctgtgct ccttccattg aaataaaatt agtggattgt ttgggtgggc aactcacgca
      301 aaagttcagt gacaaaaaga cttaatgggg aaaataagac agaaaacttg aaaaaaacaa
      361 tacaccgtct ataaggggat actatttaat tatatcaaag gcaggtaata aaatacattt
      421 ctctctttct aatcaggcag tgaggcataa actgttggga cataccgctc ggggccactg
      481 ctgtctggga ctgaaacact ggcattgtac tgcattggtc attggcgttc gtggatgttg
      541 gcattgggca tgggcattca atcagaagtt gtcaagtatg gtacccgttt ggcaacgagc
      601 acatttttgg gcatagccaa ccagggtttt cacatgggcg ttcaggggcg gatgggccaa
      661 cgtcatggtg ggcaacgcag gggcaagtcg atccagtaca tgggcaacgg agatatatgg
      721 ccaaaaaaac aaggagaggg aaaaggggga aaagcaataa attttaattt aatacaaact
      781 atactcatta ctctcaatta atgaaacaag cttaagttgt tctgaagact aacacaataa
      841 cggattgcta caccaactgt ggcttaacag tatggacctt taaaaatgag tcacttgatc
      901 tgactaaact actttttatt tttaatgtaa gatgtttcag tagcaggctg gctcctgagg
      961 gtagacacaa aacctgtcga gagtgatatt actagaacgt tgggcaaatt gggaagttag
     1021 ttctccagtc cagtctaaat tatctggact tagatggcgt attgatttga aaaaaa
//
LOCUS       KCKM01003087             926 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48429apa ultra-conserved element locus
            uce-6774, sequence.
ACCESSION   KCKM01003087
VERSION     KCKM01003087.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 926)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 926)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..926
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48429apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>926
                     /note="ultra-conserved element locus uce-6774"
BASE COUNT          303 a          151 c          158 g          314 t
ORIGIN      
        1 tgcagttgag gaatcatttt tcgtaacaga taacctgtgg tttagatgtc taaagatatg
       61 gtactttaat taaccaaagt ttaaaaaagg tagaagatgt gtaaatttgg agaaattcat
      121 aatttatttg tgactgtggg agaccttagc tatgtttttc accccagcgt ggaagcattt
      181 tgatcaaaag cccagtataa cagagataaa gaacttgcac cacagatact ttttgaaatg
      241 gaaataaaac atgaggtatt tgtagcctgg caatgtgaaa aagaaatatc taagattaaa
      301 acaaacaagt caaagtgtgt tttttcagta catagatata cacatatata cttaatttaa
      361 tgcagcaggt ttagttggtc tatttctcct cccctcctcc cccctttttt taaagcatat
      421 aaattccaac catgttttgt gtgaagggtc tcagtgcata ctgacattgt gagtgtcagc
      481 tccagatcac tttaatcaga gagtggatat gcatgataaa acggataagg gactttaatc
      541 aaaaaatccg ctggtctgga aacgtgacgc actccgccaa acacacttca tcccactttt
      601 cttgtgccac tgccaagatt tttatttcat gaatatgcat tggacatgat attacattaa
      661 aatgtgacat tgttgtgtag tggtagggat ttagaattag aataaataaa tatataaata
      721 gacttctgta aagtttttgt aattgaacat tagtatcatg ttgtgatttt acatatattt
      781 attcacctac ccccactttc cctttctcca aaatttattt ttgaattgaa tatttacttc
      841 atttctttct gcttaatagg aaaaacaata gtagcaggta gatgctttat ctaactttta
      901 cctataagca taagctatag agttct
//
LOCUS       KCKM01003088             719 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48444apa ultra-conserved element locus
            uce-2060, sequence.
ACCESSION   KCKM01003088
VERSION     KCKM01003088.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 719)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 719)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..719
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48444apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>719
                     /note="ultra-conserved element locus uce-2060"
BASE COUNT          195 a          139 c          155 g          230 t
ORIGIN      
        1 ccagagcgct ttagtgaaac tgtttgtcct tattaagctg aaaacggaaa tgcagctttt
       61 cccccgttgg aggcataacc agaatgacac aaggctgtgg cgttttatta tcttggtcgc
      121 aacttaaaac gctaacaggc gcttctttaa gaaagtttca gagaagttct ataaaccatg
      181 tctatatata atcccttttg taagcatcta ggaaactgca ggacggaaag gttgcctgcc
      241 agacctcaga aagcaaatac taattcagca gtctagtcac tctgtcaaac atttagtgta
      301 tcagggttga ttgttccctg gtaggtatag ctctggtata tccgccaggc cttttgtcat
      361 gttaactgca cccgatcaat ggattgaggt caggacttct gatgtaggtg caagcttaga
      421 gggaaaaaag tctcaaagat tcattttttc tcgtctggta gcactccggt cacttatttt
      481 ttctcagtta gcctctgctg ctctaaagtg gatattgatc agtgctttaa tgcaaacctg
      541 tcaaattaat tttgcagagc tgggatatga ctggcctaaa attgcttctg catctgttct
      601 ctgcagcaag cctatgaatt ttaatcatga ccagaatggg ctgttggctt tttttgttag
      661 aaacttgaat aggaaaggtt taaactgtaa atgccatgaa atgatgctgt tttgttctt
//
LOCUS       KCKM01003089             759 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48460apa ultra-conserved element locus
            uce-7888, sequence.
ACCESSION   KCKM01003089
VERSION     KCKM01003089.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 759)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 759)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..759
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48460apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>759
                     /note="ultra-conserved element locus uce-7888"
BASE COUNT          192 a          186 c          200 g          181 t
ORIGIN      
        1 cttcatgtct tgaaacactg gaaaacgttt cctttcgcaa acacgaactc aatttctgcc
       61 tttcaggaaa gagaggaagg tttaacttgg tggggaacga aagcacaggg cgggtgagac
      121 aaacgtaagc gctcgcctct cgaaacggtt aaaagcgcaa aattaaaaga taaagccttg
      181 aaaagacttt acggtgattg ataagacagt ggtcactcca ctgcttgctc gcagtcgctg
      241 ctaattactg gcgagccatc gaaggcggcg gccgcagctg ggctgcgcga gcgagccggg
      301 ccatcagtcg ctcccggtat tgattaccga gcaattccag ccgatcgggt gctggcgctt
      361 gagagacaat gtgcttccct cagaaaacct gtaatgagca gttcctatac aagactacat
      421 tctgctgaca tcagatctct gcactaagat agtacacagg tcaatacata ttggatttcc
      481 aaaatgctag ggtcttaatg tcagggcctc tctttttctc ccactcctgc cattagctat
      541 tactgggttc acattcttta aagccataca ggagggggaa aaaatctcct ccattagtct
      601 gatttattct tcaaatatgc catgacaaat tgctttaaca ccagacttat taaattctcg
      661 tacgctcgga gttgcggggc tggcggaggg gcggctcggg gctgcccggc ccggcgaggg
      721 aggcaggggc ggggaggccg gtctcgtcca gctgtggcc
//
LOCUS       KCKM01003090             992 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48475apa ultra-conserved element locus
            uce-5419, sequence.
ACCESSION   KCKM01003090
VERSION     KCKM01003090.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 992)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 992)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..992
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48475apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>992
                     /note="ultra-conserved element locus uce-5419"
BASE COUNT          263 a          183 c          227 g          319 t
ORIGIN      
        1 taatgtaaga aagtaacaga gcaaactcct gtgtttgcct tatctctgca cgtgacacta
       61 accgctttct ttgacagatt aagggtcttt aaaaaaacag gtaatgtgtt tttccctgac
      121 tttgtcttcc tctacttctg gagcagagct ctttgccatg gacaaagaag ggaggcgtga
      181 gtgtgggtgg ggggaaggag taaagcatcc ttccttatat gtttaattca aaccttaggt
      241 ggaattttcg ctgtttaacc agacttaaca cttgtgtgag catttccctg tcagtcatcc
      301 ctcccgcccc cttccttggt ttgtaaggtg atgttgtttc agttctgaaa ctacggcgtg
      361 tttttctggg ctcgtatttt taaagttaaa tgactgaaag tgctgaacta caacttgctg
      421 gtgacactga ctttttacca cctaaaattg gcagtgatca ccagaccaga aatggaaatt
      481 ggcaggtacc actggatgta caggagttca aggccacacc ggtaccatca tgtgccagca
      541 ttgagaggca atgttagtcc tttggggatt caaggtaaat aaagggctgg gtgaaaggga
      601 aatggagagt tcagaaatgg tggtagcata aactttatac tagtcctaac aatttaagat
      661 aaatgttctt ctgttttttc ttgttttgtc tgttaagagt gtaaggaatc tagttctttc
      721 atatgaatac ttgacataaa tccagttgct aatgcttgaa agacaataat gtgtgaggtg
      781 agggacgcct cccttttaac tgtgctgcct gattgcttca aaactgttta cagaagggat
      841 ggcgtagtat ggattttgta tgcaggtgaa tctatcactg atcagtcaca gaggctgaca
      901 ctaaaacaca tctgatttgc tgatctccta caatatgctt tctagacagt attttgtgat
      961 tttgtttgca tttttccctt gctagaagcg gt
//
LOCUS       KCKM01003091             967 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48491apa ultra-conserved element locus
            uce-7409, sequence.
ACCESSION   KCKM01003091
VERSION     KCKM01003091.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 967)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 967)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..967
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48491apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>967
                     /note="ultra-conserved element locus uce-7409"
BASE COUNT          263 a          186 c          207 g          311 t
ORIGIN      
        1 ggacgttgcc tcgcttatga cgcacgcatt ggttacactt agttgttaaa agactaatct
       61 tttttccttt cccaccgtgt ttctaggctg tgtgctgtgt ttggtggcat ctattgtctt
      121 cgccatcccg tgcggtgcct cgtagtggac aaagaatccg gacggtagga gtggtataag
      181 taaccttctg tttatataca aaatacggct gaaaaatgtg tgaagtcagt ttaaaaaaaa
      241 aagattcttc aaagatcctc cttggtatta ataacacatc aaccttgatt aaaagtaatt
      301 tgtgtatagg tcctccagaa cagggaagtg ggtctagaat atagaaacta aattaatttc
      361 cctgcaatat tactacagct cctgatcacc caagcttgga agacaaatca tttcggctgc
      421 cggggggctg gtggtgagtg atgttagttt tccttgtggc cttacctact ctaattgatt
      481 ttcatcagat gacaacaaag ccctctgtta ttgcattttt aaaaatggag ctcacctaaa
      541 gactcgtcag attaatcttt gctgataatg catgtcactc caagagaaaa gactttaatg
      601 agtttttagg tagattgttg tcataaactc tgctgccctc ttatcctagg ataaattctt
      661 ttacaacagt atcgggcctg taggcgggtt taaagttgag ctaaggaaaa tcagcccgga
      721 gttctttccg cagtggcatt tttcacacct ctgtcaatcg tcacggtttc tgttctgtgc
      781 agtctgtcag ttattagtct aatcgcagac ttctgctctc ttaagagtct gttttcagct
      841 tagtttctct aattgaaaag ttccaaacgt tctgtagcaa attttgaaaa tgaagctata
      901 aaataagtag taacgtttta cggggaaaat gagttaaacg accagtggca ggtgtgagtt
      961 gggctgc
//
LOCUS       KCKM01003092             603 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48506apa ultra-conserved element locus
            uce-1830, sequence.
ACCESSION   KCKM01003092
VERSION     KCKM01003092.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 603)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 603)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48506apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>603
                     /note="ultra-conserved element locus uce-1830"
BASE COUNT          192 a          113 c          124 g          174 t
ORIGIN      
        1 ttaaggaaag agcacccagc cacgctcgcg atacacgtgc agggtgtacg gcaaagctcc
       61 gcagccataa attgcccgtg gatcaaagat cagggcttaa atctgtgcta ggctacagta
      121 cacagcaaat aagcgacgga accatcttgc tactgcctgt ttcacttaaa gatgataaga
      181 aaacattatc acattatttt aaggtaaatc cagcatttcc agagctgatt gaggcaagaa
      241 ttagacagtg tttaggggat tatgaaaaac agcttcctct acaggtcaac agctaatcag
      301 aattctcatg agattttcca aagatttttg ccttatgaat aatttcacca aaggcacaga
      361 aatgggcaca ttatttagag agagcctttt gatgtatttt ctctgaataa gcacgggtat
      421 tcgaggattt ctgctagttc agagcaacag ggaccaactt attaaatgtt cctgctgcaa
      481 tgcctgcaag ctagctgaga ttaatatcag cataacctgt tacttaattc attatgggga
      541 tacaggctaa tttgatttga tattatttta ataaagttct gtgatatata agattgtttc
      601 agg
//
LOCUS       KCKM01003093             697 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48522apa ultra-conserved element locus
            uce-2274, sequence.
ACCESSION   KCKM01003093
VERSION     KCKM01003093.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 697)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 697)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..697
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48522apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>697
                     /note="ultra-conserved element locus uce-2274"
BASE COUNT          228 a          121 c          106 g          242 t
ORIGIN      
        1 aaaaaataga atacagaaaa accacatttt ttaccaagtt tttccacttc aataaaatct
       61 ttaataaaag gatatcgccc tctctcttat ttaaaataaa gttatgattg ttttaattca
      121 tctcaattat actagatatg cttaggaacc ttccatgctt ttagataagc caattttcat
      181 tttcaaacac taaaactgtt gttagagttt caaatgggag tattacaaat tacacagtaa
      241 gttgtaaaat taactagtca tagtaactta aactgtagta acaattgtga atttggaagg
      301 ttttgtacat gtgaggtatg atatccaatt actattcttg cctcattccg ttatttagac
      361 tacattagta ttgggcaggt acagaaaatg ggaaagttaa catttatgag agattaccat
      421 cagggtaata ttgctggttc atgccttctg gaggaccttg tccaccatga ctgtattggt
      481 ccccataata gtcttcctgg cctgagtact gctgtggtgg gcctgaaaaa ccacaaccag
      541 tcaatacgta aataacttgt tttctctatt ataaagcctg ctaatttctg attttagtat
      601 gtgaaatatt tctcaaatgt actccccacc cacagtgttg catttcagac aatatatgta
      661 atctagttta cttaaagtat atctatctat atacaca
//
LOCUS       KCKM01003094             683 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48538apa ultra-conserved element locus
            uce-7709, sequence.
ACCESSION   KCKM01003094
VERSION     KCKM01003094.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 683)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 683)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..683
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48538apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>683
                     /note="ultra-conserved element locus uce-7709"
BASE COUNT          204 a          122 c          114 g          243 t
ORIGIN      
        1 ggggatgcag aatactttca catcccgctc ccctggatta gtcctatttt gcagggattc
       61 agcatccacg caagagtatg taagtagtct ttttttcagt tttccccaaa agccatctgc
      121 tagtttaagt tttgtaaaag tccaactgat ttcagctcca ttaaatgcac acatcagact
      181 gatcgatttt ctctttttgc tttttctgtg aagcttattt taaaaaacca actatgatac
      241 ttaacacatt ccgctcacgt gacgttacag catttttcat cactgattaa tgaaaaacct
      301 gggaatttgc taaagaaaag ctgaagagac tatcaggttt gccagaaata aagtaataat
      361 caatgcagat aatattcaaa gttaattaat tagtcttctt accttgttct tttatctgac
      421 gaatttgctt cacagtttct ttcaagattg cacatttgtc aggtttaaag ttaaagttgt
      481 caatatcatt aaaatttgca aaaattagtt ctgcaagttc ttctatgtat ttattctctt
      541 gctcacgatt gcgtttttca gtgcttcttt tagggctgaa agaggagttt ataaaaatgt
      601 cgtatttaat gtcagtttgc ttgccttctg gccagctcaa agatgatttc aaatggtttg
      661 agagcagttt agcaaaaaaa aaa
//
LOCUS       KCKM01003095            1080 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48554apa ultra-conserved element locus
            uce-2008, sequence.
ACCESSION   KCKM01003095
VERSION     KCKM01003095.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1080)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1080)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1080
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48554apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1080
                     /note="ultra-conserved element locus uce-2008"
BASE COUNT          295 a          195 c          239 g          351 t
ORIGIN      
        1 aaaattttct tatatgctag ctgttctttg agcatcagtt taggtcttgt ggtttaaaaa
       61 tctgaagtaa gatgacttgt aattatatta aaggagagtg gctttagcat taaggctatg
      121 gtgaattctg ttgtagatat ttgaggatct ttttgaccaa gtagatatct ggaatctctg
      181 tgctagtcat atacaaagta ttattgcaag gagaaaatac tgaagtaaat aaagagcagc
      241 cacagtacaa ggcagtagat gtatctagag tctcagtgtt cagtgtattt tgcagtttaa
      301 tgcacaacag ttttttagtt ctgaatttct gtgtactcca ctgtgtcaga tctgtattct
      361 tgggatgtga ggttccatta aaaaataaat aataatcgca gcccccactc cccccacgta
      421 cactcatttt ctataatatg gtaatgatat caccgtagca gtaattacgg gtcatcttca
      481 tttctttcat ctctgctggt tctgatggct tcattccttt gacggagaag atttggctct
      541 gggtgctgtg attattttgt taagcattat tcgaatagac aggagtgaga gaaattaatc
      601 aatccaaatg caattagcat catgtttaac ccagtgatgg acgtctcaag gtgaaacagc
      661 caggggagtt tcagacatta ttattcaatc cagtggctct tatctaaatt ataatcaaga
      721 gaggttttta ttggcttcac ggagagaaga tgtaactctt tccgtgcttt gggggtcgaa
      781 aggatcaggt ctttggcccc acaggatctt ggctgcaggc agctcctaga agcgggaggt
      841 cctgtaggag tttgctttaa tacgagggtc actcaggaca aaatacctgc acatcctagt
      901 atccgtgacc tggaacataa gtttagtagc cccctgggca ttggcaggga tgtcattgcc
      961 ccttgctttc agtgttttca ttcgctggct ttgcccatct atatgtgaat gaacattgta
     1021 ttttttgcat tcagagctct gagaacattg cagctgagta caaacagaat gctactgctt
//
LOCUS       KCKM01003096             716 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48569apa ultra-conserved element locus
            uce-2265, sequence.
ACCESSION   KCKM01003096
VERSION     KCKM01003096.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 716)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 716)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48569apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>716
                     /note="ultra-conserved element locus uce-2265"
BASE COUNT          212 a          144 c          124 g          236 t
ORIGIN      
        1 tactgtttaa aaaaaaggct tgcaaaagca gccctctcct aaatcatcca acaatcccaa
       61 actgccaaga aagacatgga tactgctgtg cttaaaacta tttgcttaat tcactgctgt
      121 ttgaattact acaaatgatt ttaaggtttc tccctcatgc attggaaagt tcccctgccg
      181 ttcacttcct agccatttgc gtgcaaattc tgcctgtact gggatctctg ccattaaatt
      241 ttcttcacac tgaagggttt tctctgctcc tggcggggca aagtcatgac ccagaaaaaa
      301 attgattcat gaattctcag ggtgcaacta aagaagagag gaaatatgcc ttggctgagc
      361 tcctgctagt gacaatttaa aacctgtaat tagtttggat tcaagctgca aaaggaatct
      421 gaatttaaaa tgcattaatt caaactgata tattaacttt aacaaagtag atcccttatt
      481 atgtagaatc attattacag tctgttttgc taactgttgg attccagact ttattaactt
      541 taattttatt ataaaatgca agtaattgct ggtgaacact ttatctatgt gatggttttc
      601 ctggcgaaac agaacttttt attggggtta gttagcttta acacctcagt tatggattct
      661 atttttgtaa attcccatca tccacatgct gcacaatggc tgaggccact tgcccc
//
LOCUS       KCKM01003097             308 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48585apa ultra-conserved element locus
            uce-1826, sequence.
ACCESSION   KCKM01003097
VERSION     KCKM01003097.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 308)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 308)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48585apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>308
                     /note="ultra-conserved element locus uce-1826"
BASE COUNT          114 a           56 c           62 g           76 t
ORIGIN      
        1 aaggcaaaaa aattaagaaa tggcttactg ttaagcacaa cacttgtaca gtactacaaa
       61 atgcactgtc actaacaaag acattagcgg catgcagaag tgtcaccttc agaaacaaaa
      121 taatacaata aaagaactgc taaaaggcat ttacatgtgg ggaaaggaga gagaaaaagc
      181 tcacgatcca gtactgtctg atagttttgg agtctgttta tccacatttt caatgggagc
      241 aggcacataa aatggctctg aaccatcagc tgctgtgtaa ttgcagttca tagaaagagt
      301 tcttcctt
//
LOCUS       KCKM01003098             461 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48600apa ultra-conserved element locus
            uce-2847, sequence.
ACCESSION   KCKM01003098
VERSION     KCKM01003098.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 461)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 461)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48600apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>461
                     /note="ultra-conserved element locus uce-2847"
BASE COUNT          145 a           86 c           71 g          159 t
ORIGIN      
        1 ataagtacac aaaaactaca ttaaatatca gtcttcattt gtccctacca cttcagctta
       61 cctctcagtt caaaactact cactgcggcg cacagcttga gatagtctaa gatccatttt
      121 agagtggact gaaatataaa tgacagttcg cactacacat gaacatagac aactgtataa
      181 aatatttaaa taaagacaga aaagaacaga ggaaaccaac agagcctttg gcagacccag
      241 cctttgggaa tttagcagct tgagattcat tgcaaatttc atctttaatg ttatttttag
      301 ttcaatattt tgtagcactc agaagtaaat ctttgtgtgc tgtcttttct cttgcttgtg
      361 ctgcctcgtt ttctgatctt ttttttaaga aacctaatat attttcaata caattgattt
      421 gtgacatgtt ttgagatatt tgttaaagtt atcctgatcc t
//
LOCUS       KCKM01003099             535 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48616apa ultra-conserved element locus
            uce-3718, sequence.
ACCESSION   KCKM01003099
VERSION     KCKM01003099.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 535)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 535)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48616apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>535
                     /note="ultra-conserved element locus uce-3718"
BASE COUNT          167 a          112 c          104 g          152 t
ORIGIN      
        1 aagtgattag cccaaactag cacaataggt cagtggcaaa gccaaaaaac aagcccagga
       61 tttctggggc aaagctgatg cgatcatatg ctgcacaaat ccattacaga gagatgcagt
      121 agttctgtgg tctgagctgt aagttcaatg ttcatccaca ccaaaaattt aatgtatgga
      181 gagttgagtg tattttaaga gttgttcctt tattcttaca acaactggaa aggatggcaa
      241 cccaccctga aatagcaact atcaatatat gatgcctttt gcagctctcc ttcctgatca
      301 aataaataat ttgtaaggtt ttgatgacaa aaggatgtat cctctgctca gctatcacct
      361 gccagcactg ctctgtgcaa tctgatttag agatttaagc atagaaatca tcctttctgc
      421 tgtttcccct ggaaacagga agcccagcgg agaggttaat catttgggtt tgcaattcat
      481 acccggcaaa aaccaaaata attccccgtc ttctgatttt taaaacatgc tgata
//
LOCUS       KCKM01003100             712 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48632apa ultra-conserved element locus
            uce-5411, sequence.
ACCESSION   KCKM01003100
VERSION     KCKM01003100.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 712)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 712)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..712
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48632apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>712
                     /note="ultra-conserved element locus uce-5411"
BASE COUNT          234 a          145 c          112 g          221 t
ORIGIN      
        1 ctgtcttaat taaagagccc tttccactat cttgtgccag caagacattc gcagtgcaga
       61 tgctatggtt tcattccagt cagaatagag acatgctaca caactttgcc tttaattttt
      121 ggctaaacaa acaggcaaac aaacagtaga tgaaactaat ggagagctta attatatcta
      181 tccatcaagc cctaaatttg cttcctttca gaatagcagg caccatcttt aaatccaaaa
      241 ggactgatgg caagatacca agtttaaaat tctcccactg tcataggctg ttttactaat
      301 tatccagatt ccaaggcaat catacaaccg taatcattca cctcacgcct ggaaacataa
      361 gtcttgttct tttgatgaat atttataaga cagtgtaaag cagtctactt tcttttccct
      421 tcaggcaaga caatttggag ttcatcaata tgtattacca aggactttta taaaaggcac
      481 ttcaaaggaa attcatcagg cattcctttt gtcttgattt ctgttagact gatacttcct
      541 tttgacaagt atcaataaat tatcctctga tggctagaaa cttgatgtct tattcagaaa
      601 cttcctcaca cagccaagtc tggtccttaa atttccgatg aaatttttag tatctagctt
      661 ctaattaaag gataaagtag gacagagaaa gcaaatgaag gacaaaataa tc
//
LOCUS       KCKM01003101             501 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48647apa ultra-conserved element locus
            uce-3243, sequence.
ACCESSION   KCKM01003101
VERSION     KCKM01003101.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 501)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 501)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48647apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>501
                     /note="ultra-conserved element locus uce-3243"
BASE COUNT          179 a           93 c          111 g          118 t
ORIGIN      
        1 tgaaggaata cagaccagca caattcagat acaggaacga ttaatccaag attaaagaaa
       61 actgtctaaa cagtttatct cccagtaata agaaggcgtc acagtttagg aacccagtga
      121 atggagcaat tgtttaaata caacgaaaaa atgccggcat ccagtagaga tgaaatgagc
      181 atttgagtaa aatgaaggag caatttaaaa gcctttgaga aaaatcaata gaatgccagg
      241 gaagagcagc ctttttgagc attgatgggc ccctaaagct cttcatacat tgttactgag
      301 tttagcagca gggaaaagaa aattacacag tttgcagggg taggcgggaa tcaatactgt
      361 agttagtaaa gagatgctat ttcacatctg actggccagc ggcctgcctt caccagcctg
      421 tcctgatacc tgtttgttaa caagtcacta agggctgaaa aaccagatac tcttcagggt
      481 tgacacaaaa aataggcact t
//
LOCUS       KCKM01003102             947 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48662apa ultra-conserved element locus
            uce-7505, sequence.
ACCESSION   KCKM01003102
VERSION     KCKM01003102.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 947)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 947)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..947
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48662apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>947
                     /note="ultra-conserved element locus uce-7505"
BASE COUNT          273 a          177 c          175 g          322 t
ORIGIN      
        1 ttatttcgaa ggagatggat gaattgctgg tggatagaac tgcttcaaag agcatttagg
       61 gcacagaaga agtacagtgc tctttgtctt ctcaagatct ttagtaagct tggaaagttt
      121 cagttggagg agattcaagt tggcacgatt tttatagagt actgtgctgt tgacgacatt
      181 atttctcaag tcttctaaat atcatgccaa ttttgaaaca ttaataaaag taggtttaat
      241 attcagtctt tggtttccaa taaagagtgc ataatagcag tgtaattttt acaaacttct
      301 tgcttaaagt tgtagataaa cctcgctcta aacgactcag tagaaaaagc ttgtggttga
      361 gtgctctgta tgcttgcctt tttgcttcca cctagaatcc agggtcatta ctttctgtaa
      421 ccatttcagt gagctgccat agttttcagt ctgtactgtc acctgatcca agcatgcgcc
      481 aaaataccca ccgtttctgg ctactgtctg ctgaatctgc tttgcaaacc cttagttctt
      541 aagcttttgc cttagccaac agacactctt atggagtgta ctggacacat gccatcctgc
      601 ttccctatct cctctaattg tttatgtaaa tccttagctt aactaaactt gtaaatgcta
      661 caatggcatc cccatgtgaa attgtgtggc tcatgtgtca aaaaaggctg cttgtgaaaa
      721 tattcgtcag aagaatatga atgctacaca ttgcactgca ttcagtgttt tgtatcaatt
      781 tattattgca atgtcatgat gtttgatttt aattgtagac aatcattttg tgttttaata
      841 tgcaaaggta agttcatgta aactgtgaat gtacattata tataaacata ctgattcata
      901 cttctggcct ctctctggac caaaaaaaca aacacagctc aatgaag
//
LOCUS       KCKM01003103             887 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48678apa ultra-conserved element locus
            uce-7550, sequence.
ACCESSION   KCKM01003103
VERSION     KCKM01003103.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 887)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 887)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..887
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48678apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>887
                     /note="ultra-conserved element locus uce-7550"
BASE COUNT          193 a          206 c          242 g          246 t
ORIGIN      
        1 ctatgtactc tccactagca gtggctctgt gtggtcccgc tgaggaggat gcgctggctc
       61 cacaaaacat ggctgggatg ctgctgtcat acctccactg gcccctttgc tgtattgatt
      121 gatatccaca ttcctccatt ttagtgtttt agcaagcatg gtgataaaca gctccattac
      181 agagccccac gagcacctct atccctgtgc tgaacggtgc tgcttgagta cctgtgctgc
      241 agagcatctc caggagctgg gctgagggtt tgcaattgca ccccggcaca tggtacctcc
      301 agaggtcgtg gtcccaggag acaggtgggc agcaggcacc aagttctgcc tctcatcttt
      361 cactctggaa agcacaaacg ctgttgagat taagttataa tttaaggcag tgaacatgtg
      421 ctctgctggc ggctataaag attcaaatca taaagtttta cagtggaatg gtttctgtaa
      481 aagcatcgtt agaaaggggg aatcgtgcct ttaattctta cgacttatgg ggctgcctgg
      541 tttgttttgg ttttagtggt gctcagtgtg acatggggcg gggtcccaac tgcatctttc
      601 catttaaatt caggcctttc ttccccaggg ccctgctgtt ccagtgcctg gaggagggtg
      661 ggagatggtg cagagctttt tgtgctcacc ccatccacgg gtgagttttg ggacccgtaa
      721 tgtgtacgga gcttttggcc tgttgcacca gcagggagaa agatgatcca attcgtgtcg
      781 catagttgtg atgtggaatc tggggaaatc caggttgaga cacagttttc ttcaaaaagt
      841 ctagccaaac cgtcagtgcc ggcttagggt tgggttagtc aacccaa
//
LOCUS       KCKM01003104             659 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48693apa ultra-conserved element locus
            uce-2506, sequence.
ACCESSION   KCKM01003104
VERSION     KCKM01003104.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 659)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 659)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..659
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48693apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>659
                     /note="ultra-conserved element locus uce-2506"
BASE COUNT          189 a          121 c          170 g          179 t
ORIGIN      
        1 ttttgtattg tttgcatgtg gtatatgaaa acctgaaaca tctcctctga gggactggca
       61 gttctgcagt ttcactagga aatattaatg catgtaaaca tttttcaaaa ggcattacat
      121 cttcctgcac gtactttatt atattcccac aaatctgact agatttgata gataggtaac
      181 cagggagcaa ggatggggga agtgtactag agaaggaagg agggaaaagg gagcaaaata
      241 aacacaaacc tgctgtaatt caaaacaagg caaaatcaga ttgtgtgctt tggctaattt
      301 tcttattcag gtattgatcc aatggctgct ccagagtcta ttagcagtca gccagtgaaa
      361 atatttccca tcgggggctc tgacctgaga cgggggtgaa tctataccaa tttgttcaaa
      421 cagaggaaag gtttttcctc tgatttgtat ttgaatttgc acagtgtaca gggggggccc
      481 tgatgtgggg cttggcgggg aggtgcttct caggtgggaa tcaagcttga gccaggtaac
      541 tgactggaaa aaaaaaaaaa agcctgattg gactctgagc tgggcaccct ccatctgtct
      601 gactgagata tctgggcact gctgtggcct cgccagttaa agggagtaga gcagccctt
//
LOCUS       KCKM01003105            1073 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48709apa ultra-conserved element locus
            uce-5291, sequence.
ACCESSION   KCKM01003105
VERSION     KCKM01003105.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1073)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1073)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1073
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48709apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1073
                     /note="ultra-conserved element locus uce-5291"
BASE COUNT          319 a          191 c          202 g          361 t
ORIGIN      
        1 aaacaagtgt tagtattagc aatgctaatt aaaaggctgc aaaataatat ttattttgaa
       61 aatttgagtt gacacagcca aatgtgtgag cagcgtatct gtccagacat tatatgtaca
      121 cagtcttgtg tgttatagct ggacttgtat cgcatttaca atgttttgcg tgagaaacgg
      181 cttaagactc atttcttttc ttttattact gttgcttaag gatgatctga aagtaattac
      241 aatgattgag gcataattct attcaaaata attacagccc actgcatata aaactaacaa
      301 aagtttctgt cttgatttat gggtcctctt ggctaggcat gaggctcaaa tgatgcctcc
      361 gggagcaaca ctccagataa tgttaggcca tttaaaaaaa agcagatttg tgtagtctat
      421 caggcctgag taattttttt ttcccatagt gagaaattgg ttgttatcat agatcacaga
      481 taccgctcaa agctcttatg aaagatgaat taatttcact aatgctttaa tgcaaacctt
      541 tcatggagaa ggctgtatgg tgataacctt actgcggtct ctcctttctc aatgatgatt
      601 tatgttgtct tttagtagat gaaactgcct gtattcacaa tccatctgct ggctaaagga
      661 atcctattaa cagagcatct gagaagagac ttaataccgt aaggtgaaag atgtggtatc
      721 ccctttctgg gacatgaagt aggatcctat tttaaaatgt agataccact ctaagagtgt
      781 acagatgatc tatatcatct ctacctggtt ttatgctggc ttacagatcg tggatcagct
      841 agtgactatc tgcttgagtc aaaataaagg ttgtcgcttt gaaatctgcc ataagaaacc
      901 gttttccctt tcctttttgc caagctgtag ttcttcttta aaacctattt ccggaagttt
      961 cttctttcca aatactgtgt ttggcaatat taaagcacaa tcccaaacat gcagagcata
     1021 tgctgttcag ctgcagtatc tatctaaggt agaggatgac atttttatat ttc
//
LOCUS       KCKM01003106            1018 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48724apa ultra-conserved element locus
            uce-1591, sequence.
ACCESSION   KCKM01003106
VERSION     KCKM01003106.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1018)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1018)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1018
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48724apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1018
                     /note="ultra-conserved element locus uce-1591"
BASE COUNT          324 a          202 c          162 g          330 t
ORIGIN      
        1 tgtgcctcta caggaaaatg tgctcttcgc attcgttttt ataaaacaca tagttgtcaa
       61 gcagagaccc atttctgatt aatatttttg cctgatgttt ttgtgatgat attgagacat
      121 ctgaaaaacc cgctattctt acataaattc aaaactcagc ttgtacgagc tttgtcttct
      181 tcaatgtatt taggttgttt aggatttttc ttttttaagt cagaattcga tgttgagacc
      241 tgtgaaagta aattagagtg ttttttcttc actgcaatgt taaagtgatg aagcctgtta
      301 atatactgtc ttcttcctct cactgttact ttatatgata tatggttttc tcatacccac
      361 agatatataa atataagttt acacagcaag tacagaagtt tcatataaaa ctactgatcc
      421 aagcgaaacc ctatcaagtg gtgctctctt ttattctctt tctgatccta atgcagcttt
      481 tagataatgc aaatagatca caggccaaaa tgatctgaca agataatgga gctttcattg
      541 ctgcctgatt aacttggctg tagggttcca cctcgaccct ttcggcatga tggtcctaat
      601 taataatgat tactcccaaa atgtgcaaat ggaacgataa acgaagaacc aactaattaa
      661 ctgcaaccat ttctactaat cattagttaa catcccattt tgtcatcatt acactgaagc
      721 gcatgcaagg acagataaaa cagggtcagc ctttttgccc ccataaacct gacagccata
      781 ttttctttcc caataaaaga caaacaagta attaaactga gagctgaagt aagggccaca
      841 aaattcgatt acttcaatat tccaccggtg ggtgaaacag aaccattttt caaaataagt
      901 gctgaaatca tcccattcct caggcatact tcaaaggtga aattgttttc ttttctatca
      961 gaatacagat gcactacctg aaggattact tcagcttata ggaataacaa aaaaacct
//
LOCUS       KCKM01003107             777 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48740apa ultra-conserved element locus
            uce-7757, sequence.
ACCESSION   KCKM01003107
VERSION     KCKM01003107.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 777)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 777)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..777
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48740apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>777
                     /note="ultra-conserved element locus uce-7757"
BASE COUNT          209 a          140 c          171 g          257 t
ORIGIN      
        1 aggtcccttt gacacatgct atgtttcttg ttactacgtg cactgagtgc tgtctgtgct
       61 catgccatat gatctcccca ccatctctgc ctccttttgg agaaagaatt gggagggttt
      121 tccatctttg tttttggcag agaagactca aggtgagaga gaacaaatcc tgtaaggcag
      181 ttctgtcact caccgcatct tcataatctt tcctcagcct tctctgcctt ataaccctgg
      241 tattgattgt gtcataggct acagtagacc aaggcagggg gctgaaaacc tttctgaaca
      301 gcagttgcca gtctgcctgt tgcagcttga agaaaagcat gctgtgaaac caatcagtgc
      361 atttacttta gatctaagtg attccaacta ggtcgatgct tcatgctgat gtgttgaaaa
      421 cgtttaaaaa atttctcaga gtttgatttc aactgaaaca tttcagcatg tgtctgactc
      481 tctgaagttg tctgctacat tagtgagaaa ttttttctat cctagcacaa agcagtaggg
      541 aaactgggcc ttttgtctag atgggtttgt tttgaaggtt tttgtgggag gaggaggttt
      601 tcttttataa gctgaggctc ttgcaagttg aatttagagg aggagtagtt tatttcatga
      661 acttaaaaag acgtaatcac ttatatggag tgtgaatgag tgtagcttta cttaaactgg
      721 atttgaattt ttattaaaaa gcatgctaga tcattcataa aaacacgaag aatattt
//
LOCUS       KCKM01003108             647 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48755apa ultra-conserved element locus
            uce-2009, sequence.
ACCESSION   KCKM01003108
VERSION     KCKM01003108.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 647)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 647)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..647
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48755apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>647
                     /note="ultra-conserved element locus uce-2009"
BASE COUNT          166 a          134 c          109 g          238 t
ORIGIN      
        1 ctccgcattt tctgtattaa taagaataat tttcatgcgc cgttctttga agtggagaaa
       61 gtttaattgt gctgcttatt tccttgtgtt cccagcgctc tccagtggaa accttcctat
      121 attgatgtca tttataagtt tagaaacaat aacctctccc tcgcccggtc taagttcaaa
      181 gagaatttgg gcatgttata tcaaacactc cttgcattta ataggagtct ttgaaaattg
      241 taaagcaatt ttggcttctc cttttactct tcagttactt ttgatttaat tgtattttcc
      301 agcggtttcc aattgtttga attggaaaca aagccttaat aagagttcta gttaattttc
      361 tgtcttgtaa ttaccgatct catttttctg ataattggcc acagcaatta tatgtatatt
      421 tactaatcac ataggaggct ctgcagttgt gtctatctgc caccattgat aatggcacac
      481 acattgcaga ggtgctttta tcatcttctt ttttccacta catcaaagct atttccccgc
      541 attctcaata atgaatacat gcatgcattt gacacagttg tgtgctagag aaattgtttg
      601 gctcccacca aatgctgcac gctctgagtt tcttgcctgc agcgctg
//
LOCUS       KCKM01003109             822 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48770apa ultra-conserved element locus
            uce-6562, sequence.
ACCESSION   KCKM01003109
VERSION     KCKM01003109.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 822)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 822)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..822
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48770apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>822
                     /note="ultra-conserved element locus uce-6562"
BASE COUNT          246 a          179 c          151 g          246 t
ORIGIN      
        1 ggaggtggct gatgtttccc aggtagagct ggtgtcccat tctccctctt ggccctgggt
       61 taacactgca cggctagaat tcacagtcct gtgcaaggtt ttttttttgc agtcaatgtc
      121 agcttcacct gttggccaac ttctgaaaaa ggcaggttct taccaacttc ttctaccatc
      181 aaagtcatca cctcccctct tccccaaaca ataatggata taccatggac acagaaactc
      241 ctaaacagtt tagcaaagct atctttgtcc cctacacccc ctttggagaa tgcatagttt
      301 acaattcact tacaaaataa agaagcaatg ctgaccacat atgggacctt tttttttttt
      361 tgaaaaaaga acaaacaacc tcttcttaag ttcagtatca aaattcacat ttgcataata
      421 atacatttca aggccattag agaggaatga gagcgaagca aagaaaactg cagagtctct
      481 cctctctttg tcttcctgaa tagagctgag ggatcccact ggagtttctt ttcagggtgg
      541 gaattacaaa gggctacagc aacagctctt ggatcttgta cacctcatgt tttgggtggg
      601 acgaagaggt gaattattag gaaaaaaaac aaatggaagg agacactgca gattcccatg
      661 tttagctaca aacagcttcg aagaaacaaa aaattacttc agattttttt ccttttaaac
      721 acttctacct caccatttca aaaacttttt ttttttcttc ctgtgtaata ccctgttcat
      781 ttaaatggca acattaagtg tgctggaagt tgaagggttg aa
//
LOCUS       KCKM01003110             894 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48786apa ultra-conserved element locus
            uce-834, sequence.
ACCESSION   KCKM01003110
VERSION     KCKM01003110.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 894)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 894)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..894
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48786apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>894
                     /note="ultra-conserved element locus uce-834"
BASE COUNT          311 a          145 c          147 g          291 t
ORIGIN      
        1 ttttagctga cacaggcaga ctttgaaagc agtaaaatca gcaatgtaac aacgaaatgc
       61 atgcaaactt gttaagtgtg atggcaaaat aaaaagcttc agtcagtatg atcagttaaa
      121 aagaaaaaaa aaaagatagc cagcaaactg tctatcatgt gatgaaattt gacagtaggg
      181 attatggctt tgatggacca gaacagctaa tagaagaagc tgacattttt gaaaccctgc
      241 taattaaggg ttccttcctt aatattaaaa taaagtcttt gtctgggttt tatggttgga
      301 gaatcaggtg ttttcattaa tatatgccag tcagtcttaa taagcttgga gggcagagga
      361 agttattatt gagtgacctt ctacaaaata agcatgttgc taagggctct aaccctgccc
      421 tgttcagact gatgaatctc atttccaatg caaaagcttc acaagaaatc caagtattct
      481 ctgtgcaatc acagaaaata atccttgtgt ctcttgtaat gtccagaatt gccacttact
      541 atactactac tgtacaatga atattacaat acatattatt tttctagcac aattgtctac
      601 atttctgaat tgccaagaat agaaaaactt attgtcaaga cacttgtatt gaaaagtcag
      661 ctcattttaa tacttctcaa atagtcatct accctgttca tgaattataa tgcacagaat
      721 acatctgaca atgctagctt tgaaaaagag atatgtctgt gttattacat attcattttc
      781 aaatagattt caaacagatt ttaaaccatt gattgaaatt cattgaaatg ataaattcac
      841 agttggattt tgattgactc ttaatctaat tttacatttg ataagttttc atct
//
LOCUS       KCKM01003111             951 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48802apa ultra-conserved element locus
            uce-4969, sequence.
ACCESSION   KCKM01003111
VERSION     KCKM01003111.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 951)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 951)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..951
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48802apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>951
                     /note="ultra-conserved element locus uce-4969"
BASE COUNT          288 a          205 c          162 g          296 t
ORIGIN      
        1 acatcaacag aaaacatgga aagaagtgct ttgaagaatt cagtgcggag tattttgtgg
       61 ttgaacctca aactcttcta atttctttca ggctgctgtc tgaaactaaa tagcttccaa
      121 accaacttaa agacgttcga cagctaacag aaacaggcaa cagagttgtc aaaatataac
      181 agtagaagag acctctacgg tcccgaagct ctttgaaatg ccatttcatg cacctatttt
      241 catatctgtt aaacagtatt tttcagatat tagttcttcc ccatttaccc tttcattgca
      301 gcattcattc caaaatcagt ccaaactgct gaaactagac acttggaatg gctgaagtta
      361 ctttaccaga cttttctgct gtccttttga gatttatgca ctacttacat ttttgtcagg
      421 agaagtttat tttaccattt cttgtgcaac atcatcagga gtttccttct ccagatcaaa
      481 agtaaactca atggctccat tatctttggg ttttcctttc agtttcttag gatcttctac
      541 ccagagtctt aaggcaatag aggatttcct accatggtct tcttctgcaa gttccactct
      601 taccccagta tcttcagcaa aaaaggcatg gcttaataaa tctttaattt catatctgca
      661 atggaaacaa agaatattta aatactgcaa atcttaagca atttcaaaga ggtttgtgac
      721 aagaacctgc tgttaaaggc aaaaatattt accgggcgtt tggtgttcat ccacaacgga
      781 tctgtgcacc gtaagcacgt acagtactgc agattataac tttgccccat ttttctgagt
      841 atctgaactt aaagagtgct taaacaagag cttcccttcc agggagtcaa gcgacggtcc
      901 ctaaaacctg tatttgtgaa agttatgaag tactgcacag cagacacact c
//
LOCUS       KCKM01003112             675 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48818apa ultra-conserved element locus
            uce-7716, sequence.
ACCESSION   KCKM01003112
VERSION     KCKM01003112.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 675)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 675)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..675
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48818apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>675
                     /note="ultra-conserved element locus uce-7716"
BASE COUNT          188 a          140 c          131 g          216 t
ORIGIN      
        1 tttttttttt ttgagaattg ttaataaaat cacacttcta aaaaaaaaaa ccaggatgga
       61 atgtaaatgc tgcactaatt taattacact ttggcgctgg gagacactaa tgtaaatatt
      121 ctggtgagta ggcctaagac acttgaagta attacttaaa ggcttccttt caaagaatct
      181 cccccttttt attaaatgcc ttttaacatt agcactttct tcctgacaaa ttaaatgaaa
      241 tttcattact ctctctgact taatggcatg aggctgcctg ctgcaagtgt gagttaaccc
      301 tctccggatg gaagacacag agtttgtgtg ttctgggtgt caccacctcg cctgagcatc
      361 cctttggctc cccacctcca acgtggctgc aagttctgcc tttcgcccca cgtcccagag
      421 catcccagct atcggttcat ggatgtttgc agactcagaa caactgctag gcacaggatg
      481 atatccagct cttctttctc cacgtttagt gaagagcaga ttgaagctgg gacttcagcc
      541 tatagaatct ttaagagatg tacctataga attaaatctt gatgaggctt tttgtagaat
      601 tagtacaaat ctaatgtcag agtcatattt atattgatgt ttgaaggggt agattgagtt
      661 tccagcattt catga
//
LOCUS       KCKM01003113            1185 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48834apa ultra-conserved element locus
            uce-1127, sequence.
ACCESSION   KCKM01003113
VERSION     KCKM01003113.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1185)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1185)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1185
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48834apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1185
                     /note="ultra-conserved element locus uce-1127"
BASE COUNT          331 a          262 c          210 g          382 t
ORIGIN      
        1 tctctttctg caaacagcag cctattcaaa tttctgtcaa agtttattat gaaacttata
       61 tacaatatat ttctacatgt atatatacag gcagagaaca tacattgaca ttctttacta
      121 ctgttgtctt ttgcatagtc ctgaatttaa aacatggtaa ggttttatgc tctcatctct
      181 gcatgttttc catttgaata tcctagattt actctgttct gagagttaaa caatagttga
      241 aagttaattt tctttcctgc cccccaaaag caaacaacag aagaaggaat ttaacctcat
      301 atcctcactc tgaaattagc tctattgtca aaagatgaca gctgtatcct gatttcaaga
      361 atttcatgtt ggaattaagc agcatttttg aaaccattgt gttacttcaa acagatccat
      421 aatggtccct cagcaaacca ttttcagaag acttgtgtaa gtaagataaa aagacaccat
      481 ttctgaagag atgcttttat gggctaggtc agagtgctct ttccatgttg ttcattccca
      541 gtcgaatttc ctaatagcct atctcctcag ctaacagatg cccagcctca tgtcggaacc
      601 agatcgagcc accactgaga tgatatccag ctcctttctt attgagccgt ttccctagca
      661 gatggtgcaa tgctgcaggc acactccttc ctgttaatta ccagccttcg ctacagatgg
      721 aaatgtcagt cagcctcaca ggtcctggtt cctgccattg cctcagtcca tagccctcta
      781 cctaggcaag atgctgccaa cacacaccat gtgttttgtg actgctgact aggcaggcaa
      841 caaaaaacaa cttagttcat gaatattcat ggaggaatgt ttagagttct gttcatctgc
      901 aatgcttata gatctgctta aaggagattg cactttccga ggagccctgt gccccttgtt
      961 ttactatggt gcgggcagat gagttatcaa agtgtgttgc tatagtaaca tataaagggc
     1021 tattaaatgt ctgctgtttg gagacttcta taggcacatc ggttttctgg ctgccatttt
     1081 ttccatacct taagtgccct ttaattactc ttgtcctgca ataacagacc aatagtcacc
     1141 aggctgaact gattatctaa taactgttga ttttcattaa agcct
//
LOCUS       KCKM01003114             338 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48850apa ultra-conserved element locus
            uce-516, sequence.
ACCESSION   KCKM01003114
VERSION     KCKM01003114.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 338)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 338)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48850apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>338
                     /note="ultra-conserved element locus uce-516"
BASE COUNT          108 a           70 c           53 g          107 t
ORIGIN      
        1 ctgaaaatgt gagataatga ataaaaatgt tcattacaga attattcact tttctccatg
       61 attcacgtcc cagtaattac cgtgaccagc ctaataaaaa ctgctacaaa acgaaggtca
      121 actaccagtt agaagtgttc attttcattt caatgtattc atctctggct cctaatggcc
      181 tcattttctc ctatgctctt taataaatac cactgaatta caggttaaat agctaaatta
      241 aattattgca attacagcat gcggagcact gaaactggtt tacctttccc agttcaatta
      301 gaggggaagt ttcaacagcc tgagactcct gattgctg
//
LOCUS       KCKM01003115             473 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48865apa ultra-conserved element locus
            uce-3660, sequence.
ACCESSION   KCKM01003115
VERSION     KCKM01003115.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 473)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 473)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48865apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>473
                     /note="ultra-conserved element locus uce-3660"
BASE COUNT          150 a          101 c           77 g          145 t
ORIGIN      
        1 cctgaggaac cagcctcgta aattatccat ttataatgtt tcttcgtttc agctgaaaca
       61 atgatcccgg tacattttct tttaaacttt gtctgccggt cctagtggcc acctactttg
      121 ttgtccaaat ttctcgtgca gttcgaatcc tacaatgcgt aatctcagta gggttatcag
      181 ttatgtcatg cattatacag cctccaatca gcgtagtggg aaacaacatt ttcatttaat
      241 accaggagaa acagtggaag tcagcgattg ataccaacac aatgatggga aaaagtgtcc
      301 agaggtgcta ctcgcataat ctcactttac aacatcttga aaattcaata gaaaggactt
      361 tgctaacaat accagaatga cataccactg attattgttc ctaaagctct taacaatgag
      421 aaagctctct aaatatatct caacaaaaaa catataacag tttgtttctt ctt
//
LOCUS       KCKM01003116             367 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48881apa ultra-conserved element locus
            uce-6665, sequence.
ACCESSION   KCKM01003116
VERSION     KCKM01003116.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 367)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 367)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48881apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>367
                     /note="ultra-conserved element locus uce-6665"
BASE COUNT          116 a           62 c           56 g          133 t
ORIGIN      
        1 ttttgaacag ccagattaaa agttgtttga agaataatgt tttcctaagt tttagctgac
       61 attcaatttt aatgactttt taaacaaagt aactattaac tgtgcatcgt tttatagttt
      121 cctgatgtct gacaggtgtt tttgcccatg tgggaaacag atgctaataa cattttccct
      181 aatagctcat aaataataag catttagcat tttcctttgt atactgctct gtcaatagcc
      241 aatttacttt tcagaagtca caacgttttc ctgtcaatca gctttagcct cgggcacttt
      301 ttggtgatta gaaacccctt agagagcaag aactccaaat tagttttaaa taaaaaataa
      361 gaatatt
//
LOCUS       KCKM01003117             891 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48897apa ultra-conserved element locus
            uce-6013, sequence.
ACCESSION   KCKM01003117
VERSION     KCKM01003117.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 891)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 891)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..891
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48897apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>891
                     /note="ultra-conserved element locus uce-6013"
BASE COUNT          270 a          177 c          166 g          278 t
ORIGIN      
        1 atcaaacgga acatatctaa aattactgtt taaattttaa gattatgtat atgtacttaa
       61 tgatacggca tactcaatct acccactttt ttaaaaatgt ctgaattgca taatttctat
      121 gtcatttaat tacaactgta tttaaaacag taatgaaatt aaattaccca caattaaact
      181 atctttaaaa gtaattctat taatggctca gcttctctct gtactctttc aatttaatat
      241 tgggaaaata aaacaacatc agcctgcata tacagtgaga tggaggacag gaagaaaggg
      301 gaaccccagc ccagaggtgt tacaggttta cagtggacct ttctgtcagt tgcagtaatt
      361 tgtggacaac aaaacaggtc atacaaagtt caagaaatgt gtcaggtcag aagctgtccc
      421 ccaaagcaga ataaaaccag tgatgttata ggtattactt acggtagatc aggcagcact
      481 ttgacttggt tctgcttatc gccacttagc atctgtaatg ccctttgagg ctcagggcac
      541 ggccactgcc ccttttttct tttccttgct tggtctattg tctccagcat ccccacctct
      601 cgcaaagcag gcaaatagga acagacctgt tgcaaaagta acgttttgaa tgactctgaa
      661 cacagttaat taaaacgcgt tttcttctgt ggtattccat gcaaagtagt catccactag
      721 ccacagcctg ctgtatctaa gttttaaaaa gcatgatccc taaatgcttg catacgtaga
      781 ttatttgaag ttgtcttctg caatcttcta ttatgttctt gtaattcagt ctttatgctg
      841 gcctcagagg taggcgggtt ctggctgagc aagaaggtgg gaaattctag a
//
LOCUS       KCKM01003118             453 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48912apa ultra-conserved element locus
            uce-5322, sequence.
ACCESSION   KCKM01003118
VERSION     KCKM01003118.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 453)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 453)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48912apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>453
                     /note="ultra-conserved element locus uce-5322"
BASE COUNT          146 a           56 c           80 g          171 t
ORIGIN      
        1 aaatatttaa atatgtaaat ttcaatgaag agacttcaga ttttttgata gcctaatgat
       61 tttaagcatc tcatttctag tcaaacactg acaaaagatg ttcagattgc agtgtgagat
      121 ggtttctatg gttacagttg tttcctagca ttttagtgac atcttttgtg agcattggct
      181 gcttcactta tttgtcacta atgtatgtgt agaactatag ttaatagcct tgggcggaca
      241 attttttttt ctctgaatgg tggtattgtt ttttagcagc atttttcaat aaggtgacaa
      301 tgcactagaa tactaatggt atgtacggta ttttaagatg tcaagttttc aataaaatgg
      361 taatgaaaat tttgcatttc atttaatagc taaatattca tgaatttttc acagcatgat
      421 caagtgagca aaaaaataaa gaaactgtat aat
//
LOCUS       KCKM01003119             676 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48926apa ultra-conserved element locus
            uce-3771, sequence.
ACCESSION   KCKM01003119
VERSION     KCKM01003119.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 676)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 676)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..676
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48926apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>676
                     /note="ultra-conserved element locus uce-3771"
BASE COUNT          223 a          138 c          118 g          197 t
ORIGIN      
        1 tttctttttt tttaaattgc taaacccttt cccttttgct attcaagtag cctgattcgc
       61 aaggggtaga cagccagtga actgcttctg ctttcaaagc ctactttact ttccgtaacc
      121 ttcctttcca tccaatgaaa agcaactgtg gccttttact aagtaaatga gcaaatattt
      181 tcccagtgtt caccaggtta gatccccatt taattaaact ggctcattat gtccctatct
      241 gattagcaga gtagaatcaa ttattcaatg cacaaacatg gctgcaggag ctagaggtgt
      301 atacagagct gttcatttaa ttccaaggac actaattagg tacaaagcaa gcaataactt
      361 caacaattgc aggcacaagc atacatgcgg tacaggacaa ggggaaaaaa acaggccttc
      421 attttcttaa taagctggat tctcttcccc ctaacagggt caagaaaaaa cagaaagcca
      481 gagaggatga aatgtagatc aagaaagcta agcatccagg aaataaccct tgggatttgc
      541 atatgtaata gtgtgctgct acttttgtac tttataatca aacagtaggc aattatccaa
      601 attattgaca gcagatttct catttcaact gcaaattaag gccattaata aagctttcta
      661 atgcaaaagt gactaa
//
LOCUS       KCKM01003120             605 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48940apa ultra-conserved element locus
            uce-1203, sequence.
ACCESSION   KCKM01003120
VERSION     KCKM01003120.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 605)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 605)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..605
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48940apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>605
                     /note="ultra-conserved element locus uce-1203"
BASE COUNT          206 a          111 c          131 g          157 t
ORIGIN      
        1 acaagattct cacagagatt ttgatgaccg cagaagaccc tgggaaagac agagagatag
       61 ggatgacaga gattttaatt tttgcagaga aattaatggg aacaggtttg gaagagacag
      121 aatgtcaaac aactggatcc cccctccaca tccacgtgtg tttgagtatt ttgacggggc
      181 cacttcccaa cgcaaagctg ataatatgcc ccaggtaaac ggtgaaaata cagagacaga
      241 aagtcagcca ccgactgcac aggtgcagga cgatccagaa ctttatgaaa aactgacatc
      301 ttccgtcgag ataaacaaag agaagagtga cacagaagct gatatagaaa gtgaaccagt
      361 ggtagaaagc acagaaactg aggggacata atcatcactc agtaggtaaa agataccttt
      421 tgtaaagttg tcatctctct gtaatagata aatggctgac tggaccgtag cagttcactt
      481 ttgtctgcca gaattaagtt aatctgatgt tcatgttcat ctttcactta aataactgta
      541 caactgactt gtatagaaca ctgttcttaa tttgaacatg gtaggtaaac tttttttttt
      601 taatt
//
LOCUS       KCKM01003121             868 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48956apa ultra-conserved element locus
            uce-2511, sequence.
ACCESSION   KCKM01003121
VERSION     KCKM01003121.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 868)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 868)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..868
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48956apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>868
                     /note="ultra-conserved element locus uce-2511"
BASE COUNT          222 a          156 c          207 g          283 t
ORIGIN      
        1 ccttctccca gagaaataca ggataaatat actgtgcctt agaaacttga aagttttctg
       61 tatacttttc ggcggtggaa ttgccttaat tctattttgg gccatgtcta tgttgtattt
      121 cagccagcat tttccagtgc acagtagtaa ctttttttcc tcttttctcc cctgtttttt
      181 gctcaatgta aacagttact tgctatggtt acacagacaa atatagcaga gaaccgtttt
      241 ctgggagaag agtctccccg tgcatttctt aaccattttt gggaagaatt gatctatctg
      301 tgcacgtgag agagggaggc agtagctgta gattgaagtg acatcatata tattactccc
      361 attgatccgc ttttagacta gagccaggat aaaaggaaat ggcatcaggg aggaagtatg
      421 ctcgtttagg cacagatccc agtgtgataa tggagtaata atagaaatca cgccactgtc
      481 aatcagttgc tgcattagtc tgaggcagat ttcccttccg aggaggcttt caatgacttc
      541 attgaagtgc aggcaggagc aaatgggata ttcagcatac cagctgtatt atagtgattt
      601 gtgtcctggc ttaggggtgc agtgcaagcg ctggtgctgt ggatgctcaa gtagatatat
      661 ctgtgtcaca tttcatggct gtgaaaggtc agtagccaaa tgcttgtggc attttttctt
      721 ctagtataaa gggtgaatct ggcatttatt gcatttgtta atgtagaaat tgataaatat
      781 gtttgcgtgg gtggtcttct gggatgtgag gtccatgacc tctgtagctg ccatatcaga
      841 tctttgagaa ggccagattt gtttcctt
//
LOCUS       KCKM01003122            1027 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48972apa ultra-conserved element locus
            uce-7504, sequence.
ACCESSION   KCKM01003122
VERSION     KCKM01003122.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1027)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1027)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1027
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48972apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1027
                     /note="ultra-conserved element locus uce-7504"
BASE COUNT          332 a          182 c          191 g          322 t
ORIGIN      
        1 acaatttgcc aaatcctatt tggtcataat ccttctctga tttcaggtca gtatttttac
       61 tggagttctg tgtactacaa aggcagatcc ataaacttta tgggccaaat tcggacttag
      121 aaaaacaggt aaaactctgt caaagttaaa caaattgtcc ctgcttacag caacaataaa
      181 cttggctttt tatggtgaga gaaagagaaa atgctaacaa aggtttagct tggtcatgct
      241 tcatatgcac tttatcttaa aacaactact tttggttttt aattgtagtg atattctgta
      301 aagaaatacg accttacaga gcattttcag gaatagaaca gtctatatat taaaaggcag
      361 caaatgattc ataactgctt agcggtcagg cctgtggggc catgcttccc atgtgaaatt
      421 tttttctgca ttgcaaactc ttacattaaa ttgtgataaa tgaagagcgg aggctattca
      481 tacaaatcaa tgactttagt gtatgtgtca ttagcctgag agatgcaggc agcggtcact
      541 actataaatc atgtgatgat ctgctgtctg cgactcgatg caagcaagca gatgcattag
      601 gaaggttaaa gaatgaaatt aatctgtgca tttccctccc tttagtcacc tggtcatacg
      661 gaaagaatta aaatcacatg atccaaagtt aaaccagcta cagaacagta aattggctaa
      721 gttagatgtc acctttcaac ttaatgttaa ttaaatatta atggaattaa tttattcacc
      781 atcacatgag aagtaaaata tatagaatag gtaaaatcca ccagtgctcc ttgcacagga
      841 gttgatatta ttaattgctt tcgatgcaga ctatggcatg agaccacgta taagagatca
      901 agcatactgc aaaatgtgct ctgatacttt taagtgcagc atatttcttt cttcgcattt
      961 tataaatcca gtgtttagta acccatggcc atgctcttca tcttggtacc ttggagtggg
     1021 ttatgaa
//
LOCUS       KCKM01003123             948 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 48988apa ultra-conserved element locus
            uce-3856, sequence.
ACCESSION   KCKM01003123
VERSION     KCKM01003123.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 948)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 948)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..948
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48988apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>948
                     /note="ultra-conserved element locus uce-3856"
BASE COUNT          274 a          213 c          193 g          268 t
ORIGIN      
        1 atttttcaga aataattcct aattccatcc ttagttgaaa tttttgttcc tcatttcacc
       61 acttcagttc attactttag ttagtaaaca taatcctcca atgacttccc aaattttgca
      121 tgaaaaataa aaccacatcg ctccctgtct tagtgttatt taatgactgt tatcataatg
      181 agagcgacgg gagcaattca tactgtagat gagactgtgt aatggccagt tgattaacag
      241 ctaaaacggt ggccgtaaat attgctgaat atgtccagct acaatcacac tcgttctgtg
      301 tcaatccagc tgtgagatga tggatagaaa ttaataataa aatcaccaac ctcagaatgc
      361 tttcgccaaa tgtctatgtt ctttcgctgg gctttcgaga aatggtccca agctttttgt
      421 ctggtagaag cgttgaaaac ggcgacaatc tgctcaactt tggtgaacaa ggaagtcaaa
      481 caagacaagc aatttatgtt gtgatcacta tagagaagca aagcaaagac actaggagtc
      541 tatggatgat gtcattactg aaacaacatc atcaatatcc atccaatgat gtgtcttttg
      601 tacttacatt ttatcaatgt tggaggtgtc tcccttcaag tctgtctcca caactttagt
      661 ctacacaact atataccaag aaacacgcat gcagccgctc ccccatgaca cctgctaccg
      721 ctctccacct gccttggcgt gtgtggcgac gggcgtgtga ctacagaaat gacacttgag
      781 gcataaacct gacacgggtc cccttgcagc agctgcacgt agatgagtgg gctgcacgaa
      841 aaagataagc aggctctgct ctgaagggtg gacagcggga attcgtcagc ggacgggaag
      901 ggccaaacct tacattactg ctgcattctg cagctgctgt ttctcttt
//
LOCUS       KCKM01003124             853 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49003apa ultra-conserved element locus
            uce-3783, sequence.
ACCESSION   KCKM01003124
VERSION     KCKM01003124.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 853)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 853)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..853
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49003apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>853
                     /note="ultra-conserved element locus uce-3783"
BASE COUNT          289 a          140 c          149 g          275 t
ORIGIN      
        1 gttagggtac atcaaaaacg tacaaatatt ggtaacccca gtttatggtg tatgagatta
       61 tgaaagaaaa ccaaattaag ggaggatatt cacaaagtct ttgaaataat gaaggaatgg
      121 caactgctgc ttcattttaa tgttccggag tcactgaaaa tgaggaaatt attgtcactt
      181 tcactggatg agtttctcag tttttaacac attaatattt atgctgctca attgtctgtg
      241 ttataaataa cctctcagaa atctgtatgg gtcccttttt agtttagata tttaaaacat
      301 aaatagcctg aaagtagcta aatactagtg ctacatgcaa cttcatcaaa agacagaaag
      361 aaggtgctca agcactggat ctcctcttca tcccaggaaa gagttaacac aaagaaataa
      421 aatcagatat gtgtagcctc cagacgtcca ttaaagtgca gaatgctgtt ttctatcaca
      481 gattatatgc cagatgttca aactatctct aatcattgca gatgtaatgg agtagaatgt
      541 tgcagtttgt gagtttactg gcattaattc tgtatactgc acaagggaaa agattttaaa
      601 tatataatta tatctcatta atactcaggt tttatttcct ttcaatggaa caggacttat
      661 taaagcaacc atttaccgca tgttttcttt tagtgtttgg ccccaacata atcctgtgtg
      721 cattgtacgt gtaaatatgt actaacctga gtatatagaa acatacacaa ctgtatataa
      781 ttccactggt acaaaccccc actttttata tgcgtgagat gtttttataa tgtaaattga
      841 cagggaaaaa gat
//
LOCUS       KCKM01003125             953 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49018apa ultra-conserved element locus
            uce-6635, sequence.
ACCESSION   KCKM01003125
VERSION     KCKM01003125.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 953)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 953)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..953
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49018apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>953
                     /note="ultra-conserved element locus uce-6635"
BASE COUNT          243 a          245 c          197 g          268 t
ORIGIN      
        1 tccctatttc ttcttatggg gcggggatgg aggaatatat gaatgggcag aacaggtctt
       61 gcttccctaa aagggctttt tcattaccat tacgctggct ctcagcccct gctttttaat
      121 cataatagat cagccagctc tccatttact taagcttttc gatgtcagag gaaagcacat
      181 ttttatttgg cgcacctatt ttcaaatcac gggcacactg cccctgctca ttattaataa
      241 atacacttcg atttatcaca agctccgttt gagtgccacg gggagcctgg ggcaaaagga
      301 gacaaattct tttcttaagt tgttctgaaa ggtgctgggc ttcccgaccc tcacccccat
      361 taacccagca cagctagtgc gctcctactg ggagctccac ggcttgcgca gcggcaaact
      421 cggactgatc ttgtgccatc tcaatatatt tgttcattat cttgcgcaca cacagaagca
      481 tttggaaatg tactcggggc acaggccaaa ttgaatcatc tgccttcatt ttccacacga
      541 tctgaagcta cagctgctac aacaggctgt gggattttta ttttccttcc ttaacagttt
      601 ttttttctcg ctcttaaagt cacagcagtc tgattttaaa cctcctgtcg ttgcttgggt
      661 ttgtgtctgt ttttcacaaa acgggtcttg catacacaca cagagggaac agaaattccc
      721 aaaaacctcc ctccctgctg ctctgaaagc aagacagaaa gcagcacccg cagggagaga
      781 catattaaaa tactaatctc agagatgcct gttctggtgg ctcagatggg tctattaatc
      841 cactaatctc acctctgtca gtggacagac accatcagga atggcaccta cctactttgt
      901 gctgcacttg ggagcaggta acagtcccac agaaaccaag aagcccttcg gga
//
LOCUS       KCKM01003126            1033 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49033apa ultra-conserved element locus
            uce-4114, sequence.
ACCESSION   KCKM01003126
VERSION     KCKM01003126.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1033)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1033)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1033
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49033apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1033
                     /note="ultra-conserved element locus uce-4114"
BASE COUNT          332 a          208 c          175 g          318 t
ORIGIN      
        1 attggttggg gaaatctgtt aaaccttgtg ttaaggtttc gaagcactta ctgctgcttg
       61 gttatctgag atgtcttggt ctcatgacta ggaatgattt taccataaaa attgcagttc
      121 taaaatcagt acagcccaga gcatttctaa catacaccac tgccatggta gagcctgttt
      181 tttcaggaaa aaaataatta gaaaatcttt gcattctccc tccctaccac cattcagttg
      241 gcatttgttc taaacgtaga ttaacaataa gacccatttt cctctagaac aagacccagg
      301 cttgaggaat gttcctccta ctatcctaat cactaaagca tttgaaagct tacaagcaaa
      361 ttgctggaca ggagacccct tatttctatg cctacacaat tcatgactga tgggtctaat
      421 gaaattacta agttttcctt cctatttctg gcattagtca agacttcatg tccaaagatt
      481 attccaccag acatgttctg tagatgtgat gggattagcc aaatttcaaa gcttattttt
      541 gacctccagc agaaaattga gcacatacgc tattggagcc aactgggact atagaacatc
      601 aagttgattc atcaaattag ctcaaactgc atgactggct atggaagttg tcagctataa
      661 acctgtcaaa aaaccatcag ctttaacgtt aaatagagac acaaagtaat gttgttcaga
      721 atttgacatt tgttggactt atgcctgcta aaggatgcta tctgctttgt ttcctcttag
      781 caaaatttgt agtctgaaat accatcttga tagattgctg tagacaaaag gtagaaaccc
      841 tggttgtgag aaataccagc tttaacaaag cagatatatt tgtactgcct ctatctagca
      901 atgtcaacta ataccaaaat aactgcagta cacgaagact cagaaatctt tccagcagtc
      961 acaatgtgca aatttagcac attttactgt ttactgtaac tgttttttat taaaaaaata
     1021 caagcaccac aaa
//
LOCUS       KCKM01003127             636 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49049apa ultra-conserved element locus
            uce-90, sequence.
ACCESSION   KCKM01003127
VERSION     KCKM01003127.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 636)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 636)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49049apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>636
                     /note="ultra-conserved element locus uce-90"
BASE COUNT          191 a          141 c          123 g          181 t
ORIGIN      
        1 ggaacttcgc tcttttcagt tcaaatttcg tgttgcacgg agtagcatat tgcttcatgg
       61 tgtagagagt tcctggttta actccccttc ctctgaaagc aaacaaccaa gtatttggaa
      121 ctggggttac tgcttcagct gtcactacaa aatacccttc cccccacctt tttattccca
      181 acatctgaag ttacagaacg aattgccatt agcggcagct caaagtctga ggtcaaagaa
      241 aagacaaaac ctaacaaaga aattgatcct ggggcaccta tggaattcta taatcagacc
      301 catattctag acacaagcat cctcagcaaa tcgcctctga aatgtaaaaa tttaatttgt
      361 caacatgttt acatcatatc ttcaatcact gtccaggcag tggcactgtg tggggacata
      421 gggctggaga cgccaggcac actgaaatga gaagacgtgg actgattaga gttcactctg
      481 ggtagaattg tctcggacag ctcagcaatc agattattaa ctctgatacc agatactcta
      541 tctcttcact gggattagca tgaaaatttt gatatggatc gataagcaat ctttccttta
      601 taaagaatct ctgcaagctt cattaatctg tgtgta
//
LOCUS       KCKM01003128             655 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49065apa ultra-conserved element locus
            uce-784, sequence.
ACCESSION   KCKM01003128
VERSION     KCKM01003128.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 655)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 655)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..655
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49065apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>655
                     /note="ultra-conserved element locus uce-784"
BASE COUNT          172 a          158 c          162 g          163 t
ORIGIN      
        1 cagggtgcaa gacaaaattg aagagcaaca gcatacacat cgagctcggc gcacccagcg
       61 cagctgcgtg tcacacattt tggggaggag agctgggggc agaacaagtg actcggcaaa
      121 atcatttggg ggtgtcgagg agtgaggctg aaattaaagg ctggggtcta taaggagaga
      181 ggtctaatgc ccgagcgctc gttttgagct gtgacctgag gtctggctgg gcactaacca
      241 cagcatgcct catcagctcc tgtcacgggt accccggggt atccctccag cagggagcca
      301 gctccagagc cgcattctca actgccagct cgctcacaca ctaccaagac cctgccgaga
      361 aatcagcatg caacccaaga aagcatcctt tcctctggaa taaaaattaa tattacttgt
      421 catatttcat gtctgagctc ttttcatgct ttatcctctg gtaatgaggg ctaaattacc
      481 aatattagta gattttcatg gctagcacag aaagagctgt taccagaata aatgtttgca
      541 ttgcttctgt tggacacagg ctttgctaat gcagctttgc taattatttc taaataggca
      601 ataatctgca tcccctagtg ctgggtagtg gattggccac gtacctgcta tttcc
//
LOCUS       KCKM01003129             447 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49081apa ultra-conserved element locus
            uce-3250, sequence.
ACCESSION   KCKM01003129
VERSION     KCKM01003129.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 447)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 447)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49081apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>447
                     /note="ultra-conserved element locus uce-3250"
BASE COUNT          122 a           89 c          105 g          131 t
ORIGIN      
        1 ggcgcatctt ccttggctga aatccttcga gaagagggtc cctgtttgcc ataaaatcca
       61 cccagagctc tgctgaggag aaagttctat tccgcatgtg tgtgagcatg tgtacgcgtg
      121 tgttctaagt gttttgcatg atgtgagctc tgaccttcag aggggaacag aaggaatatt
      181 ttcccccctg aggctagagt tgtcagtgaa atgtctgtct ttcttaataa tttcaatccg
      241 ggtgacaggg gacagggcat tttgctctga acgaacgtac tgtaaaaact gtcagataga
      301 atttgtctca agaagcaaca tttctatcta ttcagggtca taattacagg catcttatga
      361 cctgtggagc agcacatttt tctcgagcaa aaaagaaatc ctaaaatagg tggttcagtc
      421 ttctgcagag ctttagatta aacctaa
//
LOCUS       KCKM01003130             942 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49097apa ultra-conserved element locus
            uce-6079, sequence.
ACCESSION   KCKM01003130
VERSION     KCKM01003130.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 942)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 942)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..942
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49097apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>942
                     /note="ultra-conserved element locus uce-6079"
BASE COUNT          275 a          203 c          182 g          282 t
ORIGIN      
        1 ttaataagct attctttgtg ttcattcatc cattctaaga ttctgcaact tgtccaagat
       61 gtcttgaaaa agagcgtaca atgaaacctt tgactgcaag ctggccttgg ggatcacctt
      121 tatcaccact tagctgttcc ccaaagggta acaggtgaca tggcctgaga taagacagca
      181 ctaatttttt ccatgattaa actctttcgg aattacaggt aaaatgccac aaccaaaact
      241 tgcaatagtt aagactgatc ctgaatattg acttttctga gaagagaggg gggggaaaag
      301 gtaaataatt gaaggtcatt cttttaatga tttaaaatta ttgagtgtca accaaaagag
      361 caaataaaac agtgatttat atatgggcat atgcgtaaga acttaccatt ttcactgtcg
      421 gacttgtttt catgttcggt atcagtcagt gtgagggctg agttggaacg gctcgacaga
      481 caggaactgc gccctgattt gacccccctg ccccaaagtc tcatggcatg ctctggagac
      541 atcactcctt cattttcagt atcagcatct gaccctgcac tgatagagta acctctgtgg
      601 gggagcccca tttccgcaca aaatgccagt cctcgacgag ttgctggttc acaaactcct
      661 aactgcctta gggtaaaatt ctgtcctgat taggggaaaa aaagataaca gaaggtgaga
      721 atttttttat tatttttttt tttttttaaa caacctcaaa gtaaaaactc ttcatgtgta
      781 taattgtctc aggtatcaca caaggtgctt tgtcaaaact ccacacagat tacaatcaag
      841 tggattctat tgtctccaga tctccaccat gctccttttc attcatccta caccttcgca
      901 ctgtgttgtc aactgcttag acacatcaaa agcgctcctg gg
//
LOCUS       KCKM01003131            1015 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49113apa ultra-conserved element locus
            uce-3060, sequence.
ACCESSION   KCKM01003131
VERSION     KCKM01003131.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1015)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1015)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1015
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49113apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1015
                     /note="ultra-conserved element locus uce-3060"
BASE COUNT          236 a          218 c          236 g          325 t
ORIGIN      
        1 gaaaataaat ggaagattag cctggtaaag tctagtaaac agggcatgaa gaactggata
       61 attttaatct cttttgacac tcaggctgaa ttgcttacag atacactgcc tacaccaaca
      121 aggcaagcga aacttgtcac attgacctgt tgttgctgtt cttcttggtt ttaacttctg
      181 tgagctcaga gtaaagcagt atctgggggg cagcctcgtt ggaggttttg ggttggtttt
      241 cttttttcct ggggatctat ctgtctctgt gctgcacact tgtgtggtag ttatatagcg
      301 taaccggaga ttaatattct ggaaaccaca atttatgata gctgcgatcg cacaagtatc
      361 agctgacggt actgtgtcac gttttatttc aaagaagtag cggtaacaat ggcttatagt
      421 aataacagta atgctccttc ccccggggga aaggcagaga atgctatctt gccacatgat
      481 ctcatttctt ttaagctttg cactaaccgc tgacatatcg cataaatgcc tcctttatta
      541 cctgccagtg attgtcttct gtgttgggaa tagcctccgg aacccacgtc cacatgccag
      601 caaagtgctt cgcttgctcc atgtgaattt gtctctgtct ggcgctccgt gaggcccctc
      661 tatacacctg agcatcctga ctacctcggg tagcctaaat tacaccgccg atgaaaggct
      721 tttgttcggg tgccttggag gagctggggc tgggagttgg cacaggctgg ggctatgttt
      781 ctctatttgc caagtaagta atttgccatt ttagttagcg gtcggggtct ggggtttgtt
      841 tttggttttt tttaaagttg tgtccaggta gtaatgtagc ctggccacac atctccgcaa
      901 ggattctggt tcttatctct ttggttgctt ttgaacaaaa gcagcattca gtcacatcac
      961 ttcccttatc agcttgctag cagataaaat agttattttt caaattgcct ctctc
//
LOCUS       KCKM01003132            1036 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49129apa ultra-conserved element locus
            uce-7027, sequence.
ACCESSION   KCKM01003132
VERSION     KCKM01003132.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1036)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1036)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1036
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49129apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1036
                     /note="ultra-conserved element locus uce-7027"
BASE COUNT          305 a          204 c          224 g          303 t
ORIGIN      
        1 aaaagctctc agtgaagtgg agatgctgtg cctaccatgg catggaagct tttgtcctcc
       61 ttatttttaa acactttgaa gttggaatgg ctcaattcaa cagtccattt cctttcaggt
      121 tcatttcttt atgatgctac aagaggaaca actttcagct tccagccacc cacagaaggt
      181 gcagcgtagt gcgtctggtt tatgtgcttt gtgtacacag aggctgctga ttatatatta
      241 ttcaccaaca cactaagtac aaaggcagat agttgccatt ttgataggtt aattttaaag
      301 gggttttgtt agcaaacaaa tcttagaaat aaagcagaaa aatggccaag tttgggtaca
      361 gcctcttccc ctctcccagg gaagagctgc ttgcctcttc agcaagaatt caaatgaatt
      421 gaaaattcct ttagaattga cagcccaagt gtaagaatga taaacggctt tggccttgat
      481 aatttttatt aagcactaaa tgtcacattt aacctgcatt actgaaagca attacccatg
      541 tatcaacagt caagcagtgc agagctagat gcctgaagca gcagcattat gctccatctg
      601 ggaataagga ttttcaatta gaaggcaaat agctggagag gggatcaagt cctccagtgg
      661 ctcccaaagg aggtctatga gaagcaaagt cttcatatcc gagtaatcgc aggcaatgtc
      721 aacagagcat tccaaaccat ctgctgccag aggagcgttt actttatcaa atctcaatat
      781 ttacagaaca ctgatcagct catgggacca gaatggctca ctgccagggt gttctgggaa
      841 attcatttta aggtgtgttt cagtaggcta attaatttac aagcacctgt ttcatcactg
      901 ggagctgtta gcacaccaga tgagctgcag caggggaagg ggacttttta tcctagctaa
      961 attgatttca attgattttc atttgctgat ggcacagttg tagtttaata tgaggatggc
     1021 ctaaagtctt tttgtt
//
LOCUS       KCKM01003133            1038 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49159apa ultra-conserved element locus
            uce-3662, sequence.
ACCESSION   KCKM01003133
VERSION     KCKM01003133.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1038)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1038)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1038
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49159apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1038
                     /note="ultra-conserved element locus uce-3662"
BASE COUNT          348 a          176 c          180 g          334 t
ORIGIN      
        1 aattcaaaat tactaaagag ttatataaat tagtttaaca tgaatagtag gaaataaaga
       61 caggttttgt ctttgttagg aaatttaatg acagaagcta taactcatag gaaaataggt
      121 gtctcgttca ggcattcctg ctgtatcaaa gagcacttga accatcagaa attatggata
      181 ttaaacctaa atcattgctt aggtttttgc aatgcaaatt cacttccggg cacattttaa
      241 gtggcatata gcatattaga taaagtcatg gactattaca ccgttgtcat tcagctcatt
      301 ttgatgaaaa agcaattact tatggcagat taatgcaaag agtagccata atcacaaaag
      361 gttaagctaa gagtttatta gaaaaacaca agccatttaa attaacctaa atgaccagca
      421 tgtcagttca aaagaaacat gtgctttaat ttgttaaact gtaacctttg ctatattaga
      481 aaaacacttt gacacaaaca cttcacaaat gtcagcagaa aatccatact ccatttcttc
      541 acattggttt tgtgacacga tgtttgctga tattcgtcaa gggataagtt acgattgatt
      601 tccttccacc cttactcttt tcccttgtat tatggggaat taaagggcaa aaatgacttt
      661 ttttttccta gaccattcgt atggatatgc tacagtaggt agctgctgta tagtaactgc
      721 tgcctggaac ttaaaggtca acagaatctc ttaaaaaggc tttgaactgt aacagttaga
      781 gtagtccaga gcatcctaag actgaggaac aaaagtaatg cagaaagtgg aagagcaatt
      841 gtggcaggtt gttccgagac atttgcttct gtgtattttc tctagatact gctcctgcgt
      901 atttatacac caaaatggaa ttgatgaaaa cgattgattt aaagtatcag taatatttct
      961 tgctttcgga taaaatctct tcctaactgt ctttctatct gtccctttca aactcttttg
     1021 taactataag attcaaag
//
LOCUS       KCKM01003134             912 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49174apa ultra-conserved element locus
            uce-6110, sequence.
ACCESSION   KCKM01003134
VERSION     KCKM01003134.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 912)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 912)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..912
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49174apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>912
                     /note="ultra-conserved element locus uce-6110"
BASE COUNT          286 a          171 c          179 g          276 t
ORIGIN      
        1 aatggagcac acatttgggt ggcattatta tgaacaacaa ggggctaggg ggaggttaag
       61 agatcaatgg ccgttctaaa aagccccttc cttacctcag ttcaaagaga gagccgggaa
      121 ataagactag ataccatatt cgcatcattc tagctacaaa ataaccaaag taaaagcaat
      181 caagcaacaa taagaccaca ttacacaaat ggaacatcat gctcccatct ggtttaacta
      241 ttacatcaag ttttaactgg gatgttggtc aactttaaaa accgtggtaa atgtgaatat
      301 gtagttgcaa tagttttttc ctaatatttt ttttttcctc tatgctggat attagaagtt
      361 ggagctatac ttgttacaat acagtgttgc acatctttct actagataaa gatcctttac
      421 ccgtctcttt aagttaaacg tgtgacatca taaagggtgt caaatggctg gatggtttta
      481 cagtgcacac ttattatata ctgtaatatg gagttttgtc cttgacagat ctgatggtgt
      541 ttctacatta ttcctttctt cacctcttct tgggtggatt agctgtgcga ggtggagtga
      601 ctggacgccc agaattcagt ccaccatact ggtacttggc tttcttttca gatggtttca
      661 atatcttaaa gaaaataaac aagttctttt gggtcagtgg caactaagaa catttcaaac
      721 atcattaagc caacatgaaa tctcattcag cagcaacaac aggggagggt gggagagtaa
      781 aaatcatatg atgatccttc aaatttctta ttcctccata caacaatact actacttcta
      841 aatctttcta gttctaccac tacgttgggg tgggaagcgg aaagaaaagg ggctggaaac
      901 atctccagaa aa
//
LOCUS       KCKM01003135            1054 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49190apa ultra-conserved element locus
            uce-1561, sequence.
ACCESSION   KCKM01003135
VERSION     KCKM01003135.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1054)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1054)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1054
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49190apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1054
                     /note="ultra-conserved element locus uce-1561"
BASE COUNT          322 a          164 c          205 g          363 t
ORIGIN      
        1 acatcttagt ttgctggcat ggcttccttt aagagtgtga gcagttggta tcgtgatgac
       61 aaatgaacac aatgaaaggt aggtgttaaa agcatactct tataaatgtt actcttagct
      121 gtcgatgcat tttaaagcat gatgacatgg ttttcagatg tatgaagaat ttttttttct
      181 tgaagcatta tgtacattta atgttttgaa agattttgtc tagtaagtgt ccaagttgag
      241 taaaatgcta catgttatca ctgatatttt tttctcacat taaattgaaa tgggcttgca
      301 tgttcatttt cagctttccc ttcatgcaca catttttcta agttaatgtt tcatatttat
      361 tttcattttt ccattaattt cttcctcttc aggtgcaatc tagctcctgt ggtggagttt
      421 gctgccgatg tgggaactaa atctgatttt attaccatga atccatcagt tgtacaaaga
      481 gcgtttggag gctttcggaa tgagagtgac agagaaaaat ttgtgcatag actatccatg
      541 ctgaatgaca gtgtcctttg gatccctgct ttcatggtca aaggtggaga gaagcatgtg
      601 gagtgggtta atgcattaat ccttaagaat aaattgaaag tgcgaaccgc ctatccatca
      661 ctgagactta ttcatgctgt cagagggtaa gtgtctggaa aagactggtc tatccttggc
      721 tcaatgaagc tcataactag aattcataca aaaagctcaa gtgttaaaag aaatataata
      781 cttccgttgt tgtaatggat tgcgttaatg ataaaataat ttgtttggta ataaatgtca
      841 tccactcatt tagtctgctc taatgcaacc atctgaatca cgttaccaaa ataacttttc
      901 actttcactt ttatatacaa aaatctttta tgattattac agtgataaat taatgaaagc
      961 agtctaaatt caaatgatat ctatgaggac aatgaaagtg ctacgtgtct tgggcaggac
     1021 tatggagata aaaagcgtaa atagcatagc aggt
//
LOCUS       KCKM01003136            1024 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49204apa ultra-conserved element locus
            uce-6482, sequence.
ACCESSION   KCKM01003136
VERSION     KCKM01003136.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1024)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1024)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1024
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49204apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1024
                     /note="ultra-conserved element locus uce-6482"
BASE COUNT          323 a          222 c          169 g          310 t
ORIGIN      
        1 aaaggcaaag aattactgtc cccttttgca ctcttcttac aatcgtgtta ttaacctcca
       61 agatagagcc ttttgtagaa cagtaataaa aaatttatat aaatatgtat catgttacga
      121 gccgagacgg aaaacaatgt ttccattctt caagcaatta attattgtga ttaatgtatt
      181 cccccttctc taagcacaat tctgccagac agagccagcc cattgacata ttgtagaatt
      241 ataatgcata tctaattaaa ggtgacctga aaaggcaggg tgtttagcct tccctgtcag
      301 gaccaagaaa ctgttaatca gaaagtgctt gctttccaca ccaccccacc cctccttttt
      361 ttatttttgt gctaatttca aatcttctcc ctgcatcagt gagcagatga gatcttcagc
      421 cagctttcat ctttcagaaa aatgaatagt gcagaaagaa cattatcaaa tgagctgttg
      481 aagaagtcag tgaatatgtc attgagtgtg actgcttcca gaatgaattt agatttatct
      541 ctgttatctc ccctctcccg actcactctc cacactctct ttgcactcag tccacatgtc
      601 aagcagggtg ggtcataatg aatcatgagg gacggttact tgtagtatag tgacaggtcc
      661 aattgtgata caacttgttc tggaattaag tttgttaaca ttataaattg tctcatttga
      721 ccagaggttt aaacacctag aagcttttac gcatgcaatt tcttaaagta tttcagttcc
      781 attaggcagc tgctgcttta cagtattcca caaatgaaat tgtttcatca catcaatagc
      841 tgcacaaaac aactgtgaca acaggaagac tggattcgcc cccatcttgc aaacaagtat
      901 cattcaaatc aataaactct ggcaactgca taacacccag agaagatact atttaaactc
      961 catttttaag cagatctcca aatgcttacc ctgaagcaaa aatctgacag aagccaagga
     1021 attt
//
LOCUS       KCKM01003137             715 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49219apa ultra-conserved element locus
            uce-178, sequence.
ACCESSION   KCKM01003137
VERSION     KCKM01003137.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 715)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 715)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..715
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49219apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>715
                     /note="ultra-conserved element locus uce-178"
BASE COUNT          209 a          159 c          152 g          195 t
ORIGIN      
        1 acgtctttat taccgcttcg ttacttcagg ggagctgcgt tctctaaaat gcctttccct
       61 gtggcttaaa gtaaagattt tttaaataaa taaatacagt ttatgttggg catctaccac
      121 ttgaagggct aatgattatt gactaccctc cagcagacat cagggagtct agcctcaggc
      181 ccttcccgct cgcccccaaa catgccgaat gttaacacat gtttttagat cctggctggg
      241 attggacaca aacaaggcag tcagaatgga ccatttagtg tacaagtcaa gatgacagat
      301 ctctgtttaa tacaaggaag actaaaattc gtatcttatt gaaaaaggca gaagagcccc
      361 gggtgctttc gctttgtgat tctgcagcaa aaagtgggtt gtgtcaatat aagtctatgt
      421 cacccgctcg cagctgccac actggattga ccctgctagc tgcagacaga aaggccttcc
      481 attttcaaat tctgtctaat gctcatctgc gagagcgaaa cacaaggtgg aaaaaagcca
      541 acaagttgct cctgaagtgt gggagcgaga aacaaaacaa aacaagaatg ccttaatgcc
      601 gtgagactct ctccgctgcc tgtttctaac gaaacgctgg aaaaactttc tcatctgaaa
      661 acatttcaga ggatgctttg acaacgtgag ctttatgttt tgtaaatcat gttct
//
LOCUS       KCKM01003138             868 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49235apa ultra-conserved element locus
            uce-6940, sequence.
ACCESSION   KCKM01003138
VERSION     KCKM01003138.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 868)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 868)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..868
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49235apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>868
                     /note="ultra-conserved element locus uce-6940"
BASE COUNT          283 a          159 c          180 g          246 t
ORIGIN      
        1 tatctacatc ccttatggat gccacccata aataacatgt gtgtttatgc tgcacgctga
       61 caaaacaatc aggatgaaag gattgtgtct gaaaaagaac aaaagaagaa atacgaattg
      121 gcaagaagtg gctcagagga gaagatgccc ttagagctag tcaaagacaa atgaaaatta
      181 ataacttgca atcgagatca gagtttgtct ttggcaaaac ccctgttgtt tggagcgtga
      241 tgatgacatc cgagcagtta agcctctaat ttgccaggct gagtaaacaa aacaaatatc
      301 tttgacttgt ttctgctttt tgtttgactt ttcatcgcca tgcccggcct tcgtatgttt
      361 tattggcaat ttatacagtc agcagaagac accgaagcct tagcaacaag atcttctgat
      421 gtacaaacaa aatgcattta atttgactca gtgtattaca agcattataa tccctcttct
      481 gatttcaaca tgatcgacta atctcatctg ctcagaggga taagccttgt ctcagccatg
      541 atgacaggct tagagaatga taaaaattag ggcattctca cagattatat actgtaacaa
      601 cagataaggc ttatgaataa agaattgact acaggtggtt atttgtagaa atgtgctaga
      661 ttaaggggtt aatgttggag aggtacaatg tcattcgtgg ttaaatcata gatacacaca
      721 agtgtgggaa aatctttctc gcctgtgtaa acatcagggg agatgaagca aattttacag
      781 cttgtttcac caggactcag aatgagcaag tacgttctca ataaaaggat caccctactt
      841 tgcactcgag aagttcggcg tgctaact
//
LOCUS       KCKM01003139             870 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49251apa ultra-conserved element locus
            uce-136, sequence.
ACCESSION   KCKM01003139
VERSION     KCKM01003139.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 870)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 870)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..870
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49251apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>870
                     /note="ultra-conserved element locus uce-136"
BASE COUNT          238 a          205 c          201 g          226 t
ORIGIN      
        1 ccgagcgtgg atgtcctcag cagggacaag ctggcttgaa cgttttcctc caccagaagg
       61 tggccgtggg gcccttgggc agccaggctc gcagtctgtg gaggaagaga tgctccaccc
      121 tggcacttct ctgcttcgtt ttgccagcag aatatccagc tttgggagag cttgcctaaa
      181 atttgctggt gccactttct gaagatgttt taaagctaaa ttggctaaca aaaagcctct
      241 tgtagataaa agagctctgc aagtcaacaa ctggctaagc agtttaaacc cctaagtaag
      301 gcatcctcta tttaaacgtt ataggcaaat ctaatttaag cttttaaaaa tattatgggc
      361 aggtgtttaa gtcatccgca cactgggttc tgcgagggct tcggaggggg ctgggcggca
      421 cttcccaggc gggcagcatt ttgttcagac aagctttctg cagaaggcca cgtgacatag
      481 gccaaataaa cagcatctgg ggattttcaa ttacagacct tcacccagca tgcctgcact
      541 gtaatctcta ccagatgagg ctcaggcctc actattttca ataattcaca cactgtgtac
      601 acataacatg acaataaggg cattcatgca accgcctgat tcgcacatca aagctcccaa
      661 atggccagct gtaagcatgc ttactgctga ataattcatt cttttcacag gcttgaaaaa
      721 acgctcagcg ggagttggca agcttgtgtt ctttcctgtg tggtatgcta aactcaaatt
      781 ttgaaagagg tacagcccca ctaaaaagag tcagagatcc aactatttaa atgtgcattt
      841 gcgagctttc ggatggctgc tcacaaaaaa
//
LOCUS       KCKM01003140             797 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49267apa ultra-conserved element locus
            uce-4754, sequence.
ACCESSION   KCKM01003140
VERSION     KCKM01003140.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 797)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 797)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..797
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49267apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>797
                     /note="ultra-conserved element locus uce-4754"
BASE COUNT          233 a          158 c          187 g          219 t
ORIGIN      
        1 ctgcggcgag tcagggcacc ttgcgcggga atgcacgatt gaagccacag cctaatgatt
       61 ttcctttgtc gcccctcctt tttctgattg atggttgtat tatttttctc tgaatcctct
      121 tcactggcca acggttggca gatagaggct actcccaggc cagtgagctt tacttgccgt
      181 gtaaaaggag gaaaggggtg gaaaaatcaa ctttctgcat ttaactacaa aaatgtttat
      241 gtttagtttg gtagaggtgt tatgtataat gctttgttca agaaccccct ttccgtgcca
      301 ctggtgaaca gggattgatg agtgggaaga gtggagtcag accagcaaaa ccctctctgg
      361 gttccaggga agggatccta cgcaggagga aagaaattcc tggaagtgtc tgaacttcct
      421 cataacttta attttgttgc aatggccttg gattgtctga cctcagtagc tgttaacacc
      481 aagtaacgtc tgtttcaggc cctacctaga gcacatagcc gagtgggagt aaaacaagat
      541 gcacatgcct gttaatggcc acgagagaga gagagaaatc gggaataaac ttaaaagtaa
      601 cagaaattca gtcagtgaat gttcacgctg gagatacaga acgtaacggg aaacttttga
      661 acaaatattt caaagtcaat ctgaaaccca gacatcagtg ctcatggcat acacaatttg
      721 gagctattca ggagttgcaa ataaatgcat tttcacagaa atcaagatgt tatttttgta
      781 tactatatca cttagac
//
LOCUS       KCKM01003141            1108 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49282apa ultra-conserved element locus
            uce-3845, sequence.
ACCESSION   KCKM01003141
VERSION     KCKM01003141.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1108)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1108)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1108
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49282apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1108
                     /note="ultra-conserved element locus uce-3845"
BASE COUNT          359 a          237 c          177 g          335 t
ORIGIN      
        1 tttatcaccc tcatgattga tgaaagcagt tctaagaaaa gagctctcta aactatttca
       61 aagtgcactg tagctcatca aaaatgtcag aagcatctct gagcctgtta gggctgtatt
      121 tttcaaactc ctattttttt ccccaaaaaa aatttctttg catgtataaa tttttgtatt
      181 tttaaggctc ttagtgtcat cttttcagtc tgccctttcc cttatttgct cttttcagtt
      241 accaagacat actcacacac agcaaataac tgcaaaaaac caaaacattc cttaaatctg
      301 cttaaacaag acattcaata caactacact ttatggaaat gatctaacaa actccacaac
      361 agttcaacaa taaagcagtt acaagccttc tcgtttttta aggcattcag gaagaagcaa
      421 aggaaattca gacattgcat gatctcgagc tctatgcaac agaggcttcg tgagaaaaag
      481 aaagctaata atctactttc caagtgaaac agtgtaggtg attgctctaa cctggggcac
      541 agtacattct ctctatggca tcgttgtcac aggaatcttc aacctccctc cacctgctaa
      601 aatacgttag ctgaatgtgt cctaaaaaca aaacgacagg agaaatcaaa acatttttcc
      661 cttccatttt ctgcagaagt gaactgtaat tactcctttt gtagctaaaa acagtatcat
      721 taagaataat ggcatcatta agtactagaa gctattactg ggggtgaatt tgctgcactg
      781 ataatgaagc tctagacagg aaatgaagat actaattaca agataaaacg cctactcagt
      841 taattggaag caacagcgaa taaaaagaaa tgcatttgca aaagttcctg acctctatca
      901 ttcaataaga tgttgtttgg gttcaaatcg cggcacacaa ttccttctct atgtaaagca
      961 tcaagggcta caaccatttc agctgcccat ctttgaatgc aatcctctgg gatataaaac
     1021 ctggaggtta tcgctaatct ttcgtcgagg tcctgaaaaa tttgatgtat ttccttctcc
     1081 cctgttactg ctgttttgac ttccctct
//
LOCUS       KCKM01003142            1176 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49312apa ultra-conserved element locus
            uce-287, sequence.
ACCESSION   KCKM01003142
VERSION     KCKM01003142.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1176)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1176)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1176
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49312apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1176
                     /note="ultra-conserved element locus uce-287"
BASE COUNT          355 a          240 c          207 g          374 t
ORIGIN      
        1 acatctgaaa ttggctccta gcatttcacc aaggtgttct gatatccaga gtgtgtatgt
       61 taccctactg atgtgcctaa accagtttct ttttccttgg ttcagaatct tttctactat
      121 ctgttatagc ttagcaacaa ttaacacatc ttctcacttt catagtcagt tcttactcaa
      181 ataacacttt tgacagcttt ggaggctgta acttcctatt tttttcttct ttagcgcatg
      241 aacttctgtg ccttgtttct gttaaatgga aatgctacac aaccattgta aggtggctca
      301 gactgaaact ggaccagaaa cattaactag ctcagatgag aaatacaaac caaaaagctg
      361 tctgtccatt ttggaaacat gcagataatg tgtatgtcac ttgaaattca catgcatttg
      421 ggatctgcaa ggaaaagtaa tatacagcaa tgatatcttt gatcatcgaa agaactcaga
      481 aacataggaa gtgtgtcgag tgtggttatc atcaacccat tttctattcc cagtgcacaa
      541 atcatttcat gcattctaca acccaagcca cgatgctggg cttcaaaagc aatttcagca
      601 gcaaaataag gtgcttttct tcaattttca agccatttgt acgaggttag tgttgtttac
      661 ccacctggta cactgatatt tacatacccc tttaaagaaa attggtaggt atgatttatg
      721 gagtactgta agagcacaat tttccatgta gtgcacctaa tctgaaaggg cacttgcaaa
      781 ggtcactctg gccatacaaa taccaagtct tctctttgga ataagttagg atattcattt
      841 ttcttggaaa atgtcagcag taccctactc caggggttag tttatgcaga taaatgcgta
      901 agcctttaat cttaaggcaa aaatactcca cacaaatgta agagaagtcc atctatcact
      961 gttaagacct gtaatttgtt tttatttaaa tcccaagcca gggcagcctg ggcaacaaaa
     1021 ttgttaacat ggtagctcac atctgagcca agattaaagt atataaacat acatctgctt
     1081 tcaacttggg tgaacaatac accacgtctt ctgaaagcca taatctggat tttgagcatc
     1141 ttcaatatct gctcttgttg tgctactgtg aagtct
//
LOCUS       KCKM01003143            1526 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49328apa ultra-conserved element locus
            uce-2053, sequence.
ACCESSION   KCKM01003143
VERSION     KCKM01003143.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1526)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1526)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1526
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49328apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1526
                     /note="ultra-conserved element locus uce-2053"
BASE COUNT          506 a          297 c          277 g          446 t
ORIGIN      
        1 tatgtgttct gtacctgaca aataaagtca caaacctatg ttttgaagcg aagtgttttc
       61 tcacaagaga gaaaagacac ctttttcaaa ccatacagcg aaggcagaat atgtgagtac
      121 tgatgcaatt agttgcaaac cagcatttta gtaaaggaca gaatggcata tcagaagctg
      181 gagtgatact acacaaaaaa aagtattaag ttacttgaac ttcccatttc aagtaatata
      241 agaagttaat ctgcatctag tggactctat ttatttaaag ctataaacac acaaaaatcc
      301 agggaaaacc cactgtaagt tgccaaatta ttgttttgag cagcttcaca atgcaattgg
      361 ttattgataa aacataccat taggcacacc acagcatttc actttttatt ttaaaaaaca
      421 acaacaaaaa acagaagaca tagtcgcaaa agctattttc ctacagcatg tgaagaattc
      481 aaagtgagtt cttgatttac cttctataac tgctgctata gcctttacct cgtggtgaag
      541 ggccatgtac gaatctacat gtgttcccat agaggcagtt gccagtcttc agccagttac
      601 ggcactgtgt ctaagagaca gacatcactg ggtgaatttc acactcattt ctggaaatac
      661 catcggtgtg agtgtggcag aacaaacaaa tgactccaca ttaactccca tttatctgta
      721 acttctgtcc accagtaata gaactaattt taatcaacaa caagcatcag atctggcaga
      781 gaaaaattta ggttggtgga aatattaata tgtacagtaa tactgctcct ctccagaagc
      841 tgggacaaca cacgatattt gaaaattcta gtacgctgaa catccatgcg ttaaggagat
      901 cttttcagct ttactaaaaa caccgacatc tgaatatctg gtacttgtga gctactcttt
      961 cccaccacct aaatcctgaa aaagaagatg ctggggtggg gaggaaaaga agaatgcttt
     1021 tacaactcac ctctgcagta cttccagtgc tgggtccaag cctttcaaac acactgggtc
     1081 ttcgggatgt gctgtcggat atggtcttgg tattttccac tgtgaccttc cttctaattt
     1141 ttgacatttt gtactacttc aaccaaaaaa aaagcaaaac tgtaaaatcc ttcagtttgg
     1201 gactattgac actgaactca catgatttat gatacacatt gtgagagctg ctgcagaggt
     1261 gatgaagaaa gaaaaagaag tcataaatga gtgaaatgta tctaataaca aggaatgcct
     1321 ctgatttgaa ctagtcagct gaacaccagt aacaataatt tttcatttta ttttatgtcc
     1381 tgctttggat tctccagttt ccttttggga gagattatat gacatgttat tgatttaggt
     1441 aacaaacacc acacagaaca gatgctttcc ttcgtcatgt atttcttgtg catgaactca
     1501 agtaacttca cgtgaaaaga actttt
//
LOCUS       KCKM01003144            1019 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49343apa ultra-conserved element locus
            uce-4143, sequence.
ACCESSION   KCKM01003144
VERSION     KCKM01003144.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1019)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1019)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1019
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49343apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1019
                     /note="ultra-conserved element locus uce-4143"
BASE COUNT          301 a          229 c          181 g          308 t
ORIGIN      
        1 atacacctta tcgtgtagga attaaattca gtaaaataac ttaagtttac ccaggttgta
       61 cattcaatag aaactgtgct attagtcacc tcaaatatcc tcgccgtcaa ctgctttcta
      121 aaaccaaaac atgattgcat gtgcttcgat aacgtagctc tagcaaactg acattgtcat
      181 tcatacaacc gtgctctaaa attatgttca aaagggataa cactgaaact aaaggctcaa
      241 tttctcctgc agaaaatctg gatcattatt agctgcgtct cgtgagagaa aaaaacgcca
      301 cgttactagc gccacagctc tgcatcacat ttgtcacact gtccaagtac ttcgacaact
      361 tatacgtcac attaaatagt tgatttaaaa ataatacaat gctgccatca cctgccgttg
      421 ctgggttgct gtggagaatg tctggaatgg tctgaaggct ctgacctctg gtcaggagat
      481 cgtgaacgac tgcggcgggg cctgtcatgt gatcggttgg aatgatctga tgccagcgac
      541 tgaatttctg aaatgtctgt taaataaaag ttgttttttc atgacatgac tgtaattaaa
      601 atggtggcat gacctgctca aatggaaata agctttcgca gagtattttt atgaagatgt
      661 taaatctgtg ttttattatt tcaaaacaac tgaactaagt attcctgaaa gaataatcac
      721 aggaatagca actctatctt tttctccact gcttttcaag gtgtggatcc aatggcattc
      781 aaagtagaat ttacccacat gacaatctta ctcctaactc ttctcctccc caccctctca
      841 tcccacttaa gtatttcaca tcttcacgac atggggaatt cttctctccc tttgaaaatc
      901 aagtttgttt atactcacca tctctctctg atgcattagc agaatgaata ctgtccgaga
      961 gatcaggaac gttcaacagc gtagctcgct catctcgctg caccaccatc ttcagcttg
//
LOCUS       KCKM01003145             990 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49358apa ultra-conserved element locus
            uce-5401, sequence.
ACCESSION   KCKM01003145
VERSION     KCKM01003145.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 990)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 990)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..990
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49358apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>990
                     /note="ultra-conserved element locus uce-5401"
BASE COUNT          280 a          187 c          203 g          320 t
ORIGIN      
        1 tgctgtgatt ttcagaaaaa gtgaatcttt tctgtgtttc tcttactgac tacaaaaaca
       61 atccagtttg tgacttacag atgattatac agtcctatag tataccagtt actcatgaag
      121 ctaccttaat gcagcattgt gggagaaggg aaatcctgag tccacaaaag aaaccattgg
      181 tggtcacctt ccattccagg ctgtggaagc agagactgaa atatttcctg ttctgtctca
      241 aatgaatatg tttcagtgtt caatttctaa tcttccagga tgctttgtgg tatgcaacta
      301 acagctgttg tgagtagtgt tgtttttatg cttactattt ttgtttcatg tcacactttt
      361 ttttctttcc tctcctttgc tgttggcttc acttctggct ccatcagaga gagctgcagg
      421 tctttgctgc cgcttagtag tcccctgtca taaaggaatg ccaaggctta ctgatctgtc
      481 tgtcaaaacc aaagatgtct gggaaattcc acgagaatcc ctacagttga tcaagagact
      541 gggaaatggg cagtttgggg aagtatggat gggtatggag caaaataatt attctaaaat
      601 agctctctgt gtgggaatta cgagatggaa ggtgaacgtg cagggcactg tgacccacaa
      661 gacaaaaaag agcaaagctc taactgttag gaaaagtgtc tttggaatca tgtctttgac
      721 tttgaaattc tttagtcttc aactttcgct gtaattgatg gcaaaagaaa actgaaattc
      781 cgtgtttcct tggacggttt tgattttgac aaattaccac tgtcttaata ataaatcaag
      841 gctcgcatgg taatctatta attataccaa ggagcctttt tctgcaagtt aacaaaaaag
      901 tccttacctt cagtatccaa aagtcagtgt ttgcaaatga ggcactgagg tacaagtcac
      961 cttccatctt tctcaatgca tgcataattt
//
LOCUS       KCKM01003146             473 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49373apa ultra-conserved element locus
            uce-5672, sequence.
ACCESSION   KCKM01003146
VERSION     KCKM01003146.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 473)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 473)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49373apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>473
                     /note="ultra-conserved element locus uce-5672"
BASE COUNT          154 a           88 c           86 g          145 t
ORIGIN      
        1 atagctagtg caaacaggag tggaagcctt gtttggagag ctcttgtgaa gagtgctgtt
       61 tgctccagtt caagcagatg agcagacaat cagactgaaa tgtgagtttt tcaggcgcat
      121 aatagaccct tggcttatca aagcctctta tctggaaaaa aaatcaaagg taaacttcac
      181 agctcatgga attaaaagac aaatgagatg tcataattat caaagtggct aatttagaaa
      241 attaagccat tcacataggt gacataattg cttgtcacaa tcactctttt tctcattagc
      301 cttctcttca gcatccagca tacagtggaa cattctttag acttggaaaa tattgcctct
      361 actgtaatcc cttaatagca tagccccaga aattaatgca aaaatatact taacagtttc
      421 actaatgaga tgtatttgtg tgattctctg tttgatcatg tctcatactg taa
//
LOCUS       KCKM01003147            1149 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49389apa ultra-conserved element locus
            uce-3302, sequence.
ACCESSION   KCKM01003147
VERSION     KCKM01003147.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1149)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1149)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1149
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49389apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1149
                     /note="ultra-conserved element locus uce-3302"
BASE COUNT          368 a          229 c          264 g          288 t
ORIGIN      
        1 aagaaaatga aatgcaggtg ggaagtcttt taaatgggag aaagtatagt gactccagtc
       61 tacctccttc taactcaggg aaaactcaga atgaggccaa tcagtgctca caagtcagta
      121 atgggccgtc attagaaatg ggtgagaacg gagctcctgg aaagcagaac tttgaacaaa
      181 tggacacaca ggaaattaaa agtgatttga agaagcccct agttaatgga atctgtgatt
      241 ttgataaagg agatggttct catttgagca aaaacattcc aaatcacaaa acttccaatc
      301 atgtaggaaa tggtgagata tcttcagtgg aacaacaagg gaatttggat gccacgcagc
      361 aagatactgc caaaggtgat caaggggaaa gaatttctaa tgggcctgta ttaactttga
      421 gtagttcacc tgttgtaagc ggtacgcagg aggctgcaaa actgttaacc cagcaactta
      481 gtggtaccaa cactgattta cctaatggac ctctagcttc aagtttgaat tcagatgtgc
      541 ctcagcaacg cccaagtgta gttgtctcac cacaatctac agcctctgtt atacaggggc
      601 atcaaatcat agcagttcca cactcaggac ctagagtgtc ccagtctacc ctgtcatccg
      661 aagttcggtc tactaatggc acagcagaat gcaaaactgt aaagaggcca gcagaggata
      721 atgacaggga aactgttcca ggaattccaa ataaagtagg agttagaatt gttacaatca
      781 gtgaccccaa caatgctggt tgcagcgcaa ctatggttgc tgtgccagct ggagcggatc
      841 caagcactgt agcgaaagta gcaatagaaa gtgctgttca acaaaagcag cagcatccaa
      901 ccacgtacat acaaagcatg gccacacagg tatgttgcag tgttcttttt acgtttattc
      961 taactgtgat tctgacttaa tactgtgatg aaataacgca ggcaacaatg tgaactcggt
     1021 tgggatctct cgatggtatt taaaacgtcc agaaaatgat ggttctgctc ttccgcagac
     1081 tgaagtccta atgtttgcat gcttctttga tgtcagtgac agtagtggaa tttaaaacag
     1141 tttatagct
//
LOCUS       KCKM01003148             404 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49420apa ultra-conserved element locus
            uce-7867, sequence.
ACCESSION   KCKM01003148
VERSION     KCKM01003148.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 404)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 404)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49420apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>404
                     /note="ultra-conserved element locus uce-7867"
BASE COUNT           99 a           90 c          131 g           84 t
ORIGIN      
        1 ccctggcgat gggatggcaa agcgcttttg cgagggagca ggcctggccg aggaggtgcg
       61 cggcggcaga cggacaggct ccctaaatgc tacccctctg aatggaagcc cttcatttgg
      121 gcatatgcaa ttaagcagcc ttagaaggaa gaaagctcca aacgggataa aaggaacctt
      181 taatcaagaa gctgaacggt ctaattcagg ataatagagg ggtccttact gtttgacacg
      241 ggaggggtgg gggtgctttt ctgtcgcggg agctgatccg acgacccgga gcgaaggagc
      301 aggaatgcag gagctgctgc tgcttgacct ccccgtgtcg ggaaacaaac tcggaagttt
      361 ctgccactta aaatggattt gggaactggg cagttggctg tttc
//
LOCUS       KCKM01003149             572 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49436apa ultra-conserved element locus
            uce-4739, sequence.
ACCESSION   KCKM01003149
VERSION     KCKM01003149.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 572)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 572)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..572
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49436apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>572
                     /note="ultra-conserved element locus uce-4739"
BASE COUNT          200 a          108 c           93 g          171 t
ORIGIN      
        1 accactatat tttaagattc attcagtcga cacctcataa tcgtctctaa atctaatggg
       61 acacgaaggc atttcatcac agatgaaaat cttcagcgag cgctcaaatg aaaatcagaa
      121 aattattaca atatagtagt ttggctcgcc gcgtgcatta atcagaaatc ataataaatc
      181 catatgcttc ttcagacagc acattagtca agcagtttgg tacgataacg acattgacta
      241 atgggctccg agttagaagg gtcaatcata aactcatcaa atgcttcatt taatttctta
      301 atttggacaa acacaatttg tttatgggaa agatatcagg tgctcttgaa tgaataatgg
      361 ctatgaaacc aaactccatt aatcagctcc tgattacaaa tgactcggag attgtttgtt
      421 ctaatttcat tcatttgggt caacaaagaa aacacgggca aatgaaacca cttggagaaa
      481 atggcacact tagttctccg tgtttaataa gttgtgataa atattctttc aataactgta
      541 aaacaagaat tttactaccc acattagtac tc
//
LOCUS       KCKM01003150             696 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49452apa ultra-conserved element locus
            uce-6777, sequence.
ACCESSION   KCKM01003150
VERSION     KCKM01003150.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 696)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 696)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..696
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49452apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>696
                     /note="ultra-conserved element locus uce-6777"
BASE COUNT          203 a          129 c          144 g          220 t
ORIGIN      
        1 ctggtagtga tcattcataa atccaaggga cacgctctga gatggttggt acagaagcta
       61 tttgaagctt ttattttctc aggattttgg cccattctta ccatgaattg ttctgccata
      121 tgaaaaagcc aaagtgctac agtatgtcag aggattgctt ttgtctcctg cacatctcaa
      181 aacaactgct tccttctccc tttgtttgct acgttttgac acgcttacag caaggaatga
      241 ttgaatatct gattaacatc acgtttttac ccagttttct gacgagatgc cgaaccagtc
      301 caaatccctt gagttttatg tgggaagtaa tcccacgatc caatgtcagc ataatccccc
      361 caagacagct taaatatttg tagttctttc ttaaatcaag aaatcccttg aggtttatac
      421 caatcccaat ttaaaaaatg acttgacctg aaaaccctgg aggaatgttt gaatgaggtt
      481 gtcttgcctc tggcttcttg gccaacttgc tttaataaga tatgaatgag atatacaagg
      541 tcataattta taatatgata tgaaaattac gcatccagtg aaaggctagg gggaaaaata
      601 agggatggca atggcggtag agacggcatt tattgtgatt actagaaggg ggccttagtg
      661 ggctgggatt attgtacttt aagtgaaatt gatttt
//
LOCUS       KCKM01003151             535 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49467apa ultra-conserved element locus
            uce-1913, sequence.
ACCESSION   KCKM01003151
VERSION     KCKM01003151.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 535)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 535)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49467apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>535
                     /note="ultra-conserved element locus uce-1913"
BASE COUNT          127 a          135 c          117 g          156 t
ORIGIN      
        1 ggctcactca tgagtcccat gaaactgcat tttgtttttc acttctttga aaaaaaaccc
       61 aaatctaatt tctactctcg accaatccca gggcctgagg tgacacccca aaataaaaat
      121 acgccctccc ttcctcaggt ccggtgaagc tgtattcctc tgcctcctgc agtgcaggtt
      181 aagccagtgc cagctctggt ctcgagagat tccctgcaac ccccacttgc ctcgctctgt
      241 cgccggcagc tttttcatta tttatttaat gtcttgtacc gtaaataatg gtgactttat
      301 ggttattagg aacgggttaa ggtacatgcg ggcagcacca ggctgccttc aaaaggaaca
      361 ggcccggcat aaaatgttgc gataattgct ttactgctga gtgcttggtc tttattttgt
      421 gtccgatttg tctcttaagc cagcgtaaca ttctccccgc tgcaggagaa tgcagagagc
      481 aaattgaagg tctgagcgtg aacaatgcaa catggtgcac tgctgggttt ttctt
//
LOCUS       KCKM01003152             872 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49482apa ultra-conserved element locus
            uce-3950, sequence.
ACCESSION   KCKM01003152
VERSION     KCKM01003152.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 872)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 872)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..872
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49482apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>872
                     /note="ultra-conserved element locus uce-3950"
BASE COUNT          273 a          148 c          114 g          337 t
ORIGIN      
        1 tttttattga gatattacca aacggcaact tccacattta ttcttttttc tttttgtctg
       61 cgtttatatt atatttgctt ttctgcattt gcctggttca tgcaaagttt tcacaattat
      121 tttaaattta acaatcaatt tttagtagtt ttaacagcgt aaaaattgat gatactctaa
      181 gtaggatcca taatttgcca tcttgactcc ctatgtaaca gctccataaa tctgtactac
      241 actaagctat actaacatat atgtattcag caattctttg tttcttttta ccaaaacttt
      301 gaacataggc ctttgcactt actgtttccc cagttccatt tattcaattt ttaaattttt
      361 aaaaagattt cagtatctca gctcttttca gttggggtaa cccaacacac ttctcatttg
      421 catgtaaagt gcagtcaatg tgaattgatc aaaaccaaat taacagcaat tggttccaat
      481 attttccctg tttacacatt agcttgctac ctttaacata tagatgtatc gaattcagct
      541 tagcaacttg agcatgaatg ctgtggcctt taaatagaaa cttatctgta attaaaatca
      601 tgcacaagtt ttagtgggaa tttgtttact atctagaaag ttgattctaa aaatgaatag
      661 aatttagctt agtagttcat gtgtttagtt ctgaattaaa tcccctaaaa ttatgattag
      721 ttagctttat taaactccag attatatcaa ggttatgtct gtttctgtgt gggtttttga
      781 aaataaaaaa aatcaaatcc cacaacacta ttgatttttt ttctaaggta tcactgccaa
      841 ccaataataa gttaacagag ttataatcat ta
//
LOCUS       KCKM01003153            1115 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49497apa ultra-conserved element locus
            uce-3050, sequence.
ACCESSION   KCKM01003153
VERSION     KCKM01003153.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1115)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1115)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1115
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49497apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1115
                     /note="ultra-conserved element locus uce-3050"
BASE COUNT          207 a          343 c          300 g          265 t
ORIGIN      
        1 agcttctccc tgtttggcag gcgagagcca gcatacagca cccacccacc acgcaggcat
       61 ttgtgccact gagctcttgt tctaactctt gccgtttgtt gcaggcccat caccctgacg
      121 gtggccaagt gctgggaccc cagcccccgg ggctgcttct cgttacccag gagtaagtgg
      181 atagctgacc cacccttaac gctggtgccc agctcatgtg agagccctgc cttaagcact
      241 tacttggctg ttgtcttgtt cctcccctgt gtgtgttgac tccacgcggc actgaattgg
      301 gatttgatgg ggtttcagct ctcctcttag gaggctgcta tgtgctattc ccaggccaaa
      361 atgcccatga gcccagccct ccttcccaca tcacgctggg gacgcgtttc actggggcag
      421 ggaggtcact tgctcggggc gccagaggaa agagaaaccc ctccttgagc cataggggga
      481 tctctccctc tgcacctctc ctgctgaccc tccctttctt ctttctctcc cagttgctcc
      541 ccagcggatc tgggctgggc cagactctcc atgctccgat ccgggtgagt cccggcagat
      601 actggggatg gaatgggctg cgctgagtcc ctgtccctcc ccagaggttg atttgatgag
      661 gggataattt catatagcta ctgactgact ctttcttcaa tgcaggtgag cccatccggc
      721 ccatcgaccc ggcagcctgg gtgtctcaca cagcagcgat gactggcacc tacccagcgt
      781 acggtatgag tccatccatg agcacaatca cttccaccag ctcctccatc accagctcca
      841 tcccagagac tgaacgtaag tccttgtgcc tccgtgctcc acccgctgca cggcttcgtc
      901 gccttcactg tgctgtaaag ggagcaatac atctgcctgg gcacagctgg ggtgggtgag
      961 gtccttgcca agggtctaac agggaggcag ctctcactag gcaggcgctt ggatcagtgg
     1021 gagttctgac tgggtgaatt aataccacat ttttcaacct tctacataag gagagtagag
     1081 gagcctgggt gcagtctagg agctgtggca ggtgc
//
LOCUS       KCKM01003154             989 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49513apa ultra-conserved element locus
            uce-1470, sequence.
ACCESSION   KCKM01003154
VERSION     KCKM01003154.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 989)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 989)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..989
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49513apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>989
                     /note="ultra-conserved element locus uce-1470"
BASE COUNT          251 a          261 c          182 g          295 t
ORIGIN      
        1 gacagccgca cccctccgaa agtttgcagg gttgctgcaa cggtgagaaa agagaagacg
       61 ttgcaaggtc ttctggccgt ccggcgggcg caccactgca cacatcgcgg aaggctgcgg
      121 ctaccccgcc gctcgcctct cggtggtcag tcctcccagc tgccctatcc gttactgtct
      181 gattagctct gcgaaggagc ccctccccgg ccagctttcc ccgccatctg ttccacacgc
      241 gatggctgcc gcccagcagc ctcgcgctgc cctcctacct ggcacccggc tcccggcctt
      301 accccaaagt gctaacacag gttctcgctg ctggcagagt caggatttca ttactactac
      361 tttgacaagt gcagggttgt ttgtaatttc tcttttatcc tgattttgat tgtacaacca
      421 cctcccactg attcagtttg cttcagtttt gttgctcaca gattttactc tccacattaa
      481 tctccctctg gcatgttact gcatctgttc ccttttttat tattaatttt caaattccca
      541 ccatttttga caaaaaggag gtaatctaca ctctgcttct gcccatttca ttttctttaa
      601 tttggaagat aagtatgaaa gcgtgccaaa gaagttaatt ctccgttaac agtttatttt
      661 ctggcatccc gatgcctttg tatatgaaaa ccagatagaa ataaatgttg actgaatcac
      721 aacaacatag tcacaaccgt ccctaaattt aatgaaaagt aaacatatga agcagaacct
      781 aaaaagttta ttagttatcg gagttgtttc atgttatcac tcctccctgc attttaaaat
      841 catggttttg tacaaaatga gcagaatata aaaagaaaat tagaaatcaa tcgctccaca
      901 cacctcattt ctgcttctca gttcaagtgt tattggtcct ttcatcagtc agtcagtttg
      961 tgaacataaa acatatctca gtcatttaa
//
LOCUS       KCKM01003155             759 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49529apa ultra-conserved element locus
            uce-4220, sequence.
ACCESSION   KCKM01003155
VERSION     KCKM01003155.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 759)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 759)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..759
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49529apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>759
                     /note="ultra-conserved element locus uce-4220"
BASE COUNT          178 a          187 c          186 g          208 t
ORIGIN      
        1 aaaaaaagcc caataaaagt caaatgtgtc ttttttgatc agcaacaaaa agacaaagac
       61 cagcccttta agtcagatgc tgtaaactga cctttggaga aaaaggagag gtttgagcgg
      121 ttttccacaa atgctaatgg cctagaaaac atgtttaccc agggctgggg gaaggctgct
      181 gtgctgctac cagctcaaaa tgtccggaat gacactttca ttcacagatg tctttcgtct
      241 gtgcctcaga ggtccggggt caaagcagca ccggcaggca ggtatgcagg ggcgaaaggt
      301 ttgatcagtc tgtgatgact ccgctcgctc tgcatttgtc tctgaggtat tgccgcccgg
      361 gggggacagt cgggctctgg tcctactcac ttcctattat ccatgtgact tgtctccgcc
      421 acgctggagt cactttgatt tgcctgatgt actgcttgac aaagctgggt gatggctgag
      481 aagtggatcc agctgctctg aaaagcgcac acctgacatg ccagtcctgg tgcgggcaca
      541 tcatggggag cgttttttaa ttcaatgtaa tttatgcatt cttgcagtcc tgtgtgtgcc
      601 tggcctgtca gccagtgtct agatgaaggc tgacagttgt catccagggc ctgaaggtag
      661 cctcacataa tgacacatta gacatactaa tgatgttttc ttctggcata atgttttctt
      721 ctcaactttc ctctctcctc tccctcccac cccctcctc
//
LOCUS       KCKM01003156             721 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49545apa ultra-conserved element locus
            uce-1880, sequence.
ACCESSION   KCKM01003156
VERSION     KCKM01003156.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 721)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 721)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49545apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>721
                     /note="ultra-conserved element locus uce-1880"
BASE COUNT          251 a          118 c          134 g          218 t
ORIGIN      
        1 aagatacagt tattatgtag gatgattgga ataatgatgc aaggttaaca ctcgaactta
       61 agtatttcca gacacatttc ccccattttg gcaggaaact tgttttgtaa gacacagaac
      121 tgtcctaata taacagcata gcaactgaaa cttaaaacag aacaagtcag ttaatggact
      181 gttgggagac ttttgctgta taacagcatt tagacgcatg tatttaaaaa acaggtggat
      241 aatccaaatg ttcagttact aggacactaa cagttatgtc catggcaatt ttgtttctgt
      301 tctttaaaca aatcatcact tgcaagcact aatgttaaaa ccagagagcc agtgtagtac
      361 acagtggcta taaatgccaa atcaattttc agcagataat aaagtccatg ttttacaatc
      421 agcaatgcac tgttttacta cccaaaatgt aagctaataa tatatagctc tgctaaatgg
      481 aaaatgcaga tatgctgtta agaaaagggc tggctgtgag atgatggatc atttctgctg
      541 ggaccttctt aaagctatgt gcaaatgttt tgaaaatatc acatgatgtg gccatgtgtt
      601 aaaaattaca gccagttaag ttctctgcta agaaaaatat gtgggcaatt tatgaaatgc
      661 actccaggat ggagatatct taagtaaaac cagattttga aaacaaaccc tttttttttt
      721 g
//
LOCUS       KCKM01003157             834 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49561apa ultra-conserved element locus
            uce-2657, sequence.
ACCESSION   KCKM01003157
VERSION     KCKM01003157.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 834)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 834)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..834
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49561apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>834
                     /note="ultra-conserved element locus uce-2657"
BASE COUNT          195 a          178 c          183 g          278 t
ORIGIN      
        1 gatggaatag aaagcagtct ggagagttag ggtcttgcta gtgtgatgca aataaggggt
       61 gtcacaggag caaacgtctt ctctttgctg ctaagtaatt tacatgaaag cattgccagg
      121 gctttcggta aacgctgttt ggaaagggct ggcatgtttt tggaaataag tgcagtccgt
      181 gtccgagatg cgtgtatctc agcctcttct ttcagtgcag tggcaatgaa aagcatcaca
      241 ctcaaatgaa ccgcacaaaa tgtacataac ttttctgtct ttattctaca ctgacagcct
      301 tctttctgct gtttttttat taattgcaca gaaacagagc tctactttct tcttatctcc
      361 tgcttccaac aaagttttat gttgtcattt gtctgcccta caaacttgac tgtgtataaa
      421 gatgaacaaa caatatttgc ttttaaggtt ctcagataca gcacctcact caggtgggaa
      481 ttgctagcag gatcggaggt caacaagtgg agatcccctc aggcagagca gggcatggcc
      541 agccgggggg gccagggtgg ccccagtacc gtggagagga tgaatgtgct aggcgagatg
      601 cagtgagtac tgtgttacac atttgcatag tttctgaagt agtgacatgt tcgggtattt
      661 tatttcctgc attattgttt ggaacttttt ccacctggaa tactttcagt tgcttctctg
      721 acattctttg ctttgctctt caacccctgt tagctcttct aacttttgct tgctgttctt
      781 tcatctatgc ttctctctaa ctgctttctc tctctttacc ctaacctttt tttt
//
LOCUS       KCKM01003158             601 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49576apa ultra-conserved element locus
            uce-5064, sequence.
ACCESSION   KCKM01003158
VERSION     KCKM01003158.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 601)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 601)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49576apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>601
                     /note="ultra-conserved element locus uce-5064"
BASE COUNT          164 a          116 c           87 g          234 t
ORIGIN      
        1 taccatgggt tttgtttttt aatctggatt ttccttcccc aacaaataac tgctgcattt
       61 ccagtcactc aaatttggac agaattttac ttcctgtttc aaaggtcaag gaaagctgac
      121 ctcaacagca gtgttgaggc tgctgaatta ttcatatcat tgactttgtg tcagcttcca
      181 catttgtgca gagggatgtt ttattcattt atctcattta gggacctgct ctgcacctgt
      241 ttctaccatt aagtaccctg taatttgcat ttgatgctaa tttagtttca tatcagcctg
      301 gtcccccctt gttaatttaa ttttctaaga cccttttcat tacagtagaa atgtttccct
      361 ctttaaagca aacatctata caagtaattg tataaactgc cttttaaata atatctttta
      421 gaagattcca tcgtttaatt ccttaattcc tataattagc catggtttga ttaatgtttc
      481 aaagggttaa attaaaatgc agaattactc aaatgcatac ttgaataatt ttctctctgc
      541 tgataacagt ttctgcattg ctgcttttat tctaatcgtg attctgaata ttacatgtac
      601 t
//
LOCUS       KCKM01003159             971 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49592apa ultra-conserved element locus
            uce-195, sequence.
ACCESSION   KCKM01003159
VERSION     KCKM01003159.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 971)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 971)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..971
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49592apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>971
                     /note="ultra-conserved element locus uce-195"
BASE COUNT          287 a          223 c          202 g          259 t
ORIGIN      
        1 ttttttcact atcttaaagc atttttcaaa tgatctccat tcagaaacag ccagtgctaa
       61 cactaagcaa gcagttggtg acagaaaaag aactccaaac atattgcaca aatgggggct
      121 atggatcgca gtctctgcct tcatgccagc tgtcaagaag gggtgcatgc ttgtacaaag
      181 aaaaggagga atatctctga aatcacaaac tgcaacgcaa ttcagctcct ctgctacttt
      241 aaacatagga ttctgtgtga ataataaccc ccaaaaagtg cagttagcat tatgaagtat
      301 tgaatagctt ttaaaagcat ttagaaaata cgtacaagga tgaaaaggtc acttgcataa
      361 aagagggtat gcacaaggtg aaagcctaat gaaacattat gcggtatctt ttttggtact
      421 cagaatagct ccaaggttaa gagagtccga gccagtcttc tgcagatcca tttcctctct
      481 ccaggcttct catgttaacc cagtgattta gtactctgca ttaagagcaa ttcacctgcc
      541 tctggtgtcc ctgtggccca tccctctggg gagcgaggtg gagaataaaa agttccacat
      601 atggtaaagt caagctgctt ggagcctgct gagtgtctgc tgtggggata gcggctcctg
      661 aaagccccag ctggtacttg gaagagattc tgcattacta cacctcagtg cctgcttggt
      721 tcccttcgga aactgttggc tccacatacg acagccattt tagatctctt caaccctttt
      781 ctcccggttc tgtatccaac tgaacagttg gtcctctact gctggataat caaattcttc
      841 catctggtcc tatccctgtg gaactgaaaa ggtgtagtgt gcacccggtc ccaaacacat
      901 accaggagag gcactgcctc actaacaaaa aagctgtcaa caatagaaag cactaaaaag
      961 tctattttaa a
//
LOCUS       KCKM01003160             544 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49607apa ultra-conserved element locus
            uce-4377, sequence.
ACCESSION   KCKM01003160
VERSION     KCKM01003160.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 544)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 544)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..544
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49607apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>544
                     /note="ultra-conserved element locus uce-4377"
BASE COUNT          161 a          100 c          119 g          164 t
ORIGIN      
        1 tcaaataaat acctcgtaag tacaaggatt tctttccccc ccaccattta tcttttgctt
       61 aaatccttcc tctccagaaa taatacaaat caagcctctg gggcctgttt atataatggg
      121 gatttatgtc atttcaagac aaatggcatt tgctaagttt cagggaagca cctgtattaa
      181 ttgtatttcc tgctcatgtg ttgcttttgt ttgcaataaa ggaactcatc tcaggtgagt
      241 taacctcgct tttagagggg gcacctgcag ttatctcagt gcttattgta aatcaaaaca
      301 tgttgagcct ttaaagcagg gaaataaaga ggtgctgaca agagggtatg ccaataggat
      361 taggagcttt tctcaccgct tgtattatca ggatggagaa ttgagtcacg ttaaattaca
      421 gggggaagag atattcccag aaattaaaca gattggagat tgacttgctc cttcagtaag
      481 cctgtggaaa ggagaggcat tctgtgtttg gcgagattaa gaagagaaaa agacacctcc
      541 cttg
//
LOCUS       KCKM01003161             836 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49622apa ultra-conserved element locus
            uce-3586, sequence.
ACCESSION   KCKM01003161
VERSION     KCKM01003161.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 836)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 836)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..836
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49622apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>836
                     /note="ultra-conserved element locus uce-3586"
BASE COUNT          205 a          200 c          192 g          239 t
ORIGIN      
        1 ggggtggtgg aagggaagga gttattaaat gccaagcaga tatgcaataa atcccattga
       61 ttttacaaac tccaacttgt ctccagcctc tttccattct ttatcctgag ggcattgcaa
      121 caaaacccta ttttaaatac cttttctttc ccttccacct tccccctcct cccactcccc
      181 aaaaaagtgt caatatttta tttggatttt taacttcgct ccataacagt tgtttgacct
      241 cctgactcat gtgagtcaca taaattctgg gactttattc aggagccatg ttcctgctat
      301 tgaataagca atttgggagg gtgaattaat gacttgtgct gttgctggaa agtccctgaa
      361 gaaatattaa aattgcttgc agactgaatc aatactcact gaacacccag catgaggacc
      421 tgggcttttt aatggctaca agccgcagca cttggtagag gaaggggaat tcctgtacac
      481 acaacgcatg caggcacaca caaccgacag cagtcttccc ctggccttgc tggctttttc
      541 agtaacggtg tgttcttgtg cgtgcaacct ggtacgagct gacacctgct gtgccaggga
      601 acggacttac aagactccag ttcccctgtc tccctcccaa gaagatcatg caggatttgt
      661 aaaagccggc cgttcgggcc tcgtgttaag cgcctgggtt agcacgctct ggcacaggct
      721 gcgaggcgca aggaaggtcg attatttgtg gcgttatgaa catgttttat gtgggcactt
      781 tgtttttttc ctctctgaag gggaaagaca ctagtgctgt gatagacctg ggtgtg
//
LOCUS       KCKM01003162             686 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49638apa ultra-conserved element locus
            uce-4042, sequence.
ACCESSION   KCKM01003162
VERSION     KCKM01003162.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 686)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 686)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..686
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49638apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>686
                     /note="ultra-conserved element locus uce-4042"
BASE COUNT          199 a          118 c          141 g          228 t
ORIGIN      
        1 tcttttcgtg caagaaggag aatccggtga tttcggtgtc ctcaacagtg atgcccttgc
       61 aagaagttgt tctctccgtc aaacctttgt ccctctttca aggctgtctt gttacactgc
      121 agttcatctt tgttatggta atttaaaaat ttaacaggtt tattaatcct gcagaattta
      181 ttatagtcaa gcatgagata ttattaagtt gctgttgtac aaagcattta ccctcgctgt
      241 tggaatgact tgtcctctgc attggcagac gcagaaacgt tcattttgtt tcctaattag
      301 gagagctgca atcaggaacc atgacagagt tcagctcctc ggtgtacagc atgccaggtt
      361 ccatagtgca ggctttataa aattctcttt aattcaggaa cagaatatca ttaactttgt
      421 aagtggatga atacaatgga caagcaattt aattaacttc taacattgga tgttggacag
      481 gagacaaaat gaaattatgc acatatttct tatgcaggca gtcaaccttg aaaggggctt
      541 gattgtgatg ggtcagacag ggggacagct ttgtccaatt atttgatgtt tagtcttaga
      601 atatgaaatt tgaaatttgg tactttgtaa atcaatcatc tcttattttg aggcagttag
      661 aaaggttctt tgagatacaa aacaac
//
LOCUS       KCKM01003163             458 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49654apa ultra-conserved element locus
            uce-4925, sequence.
ACCESSION   KCKM01003163
VERSION     KCKM01003163.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 458)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 458)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49654apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>458
                     /note="ultra-conserved element locus uce-4925"
BASE COUNT          143 a           88 c           86 g          141 t
ORIGIN      
        1 aagctgataa gaaaatatat ccccaattat cacccctcct cttcctgatt tgtaactgct
       61 cctaataaac tttcatggtc tatgtaaaat gctttagtgc agtgacaaat ttctgctgga
      121 atttgagatg tcttgttcag agtaatagct atctcacaca ggtgcccagc tgctattgta
      181 aaatcagtaa gcatttaatt gaaacaaatg actataataa tagtacatta tccctgcagg
      241 ctcatagcca taacagtttt aattattgag ttaagagtca aactaattta tcctttaaag
      301 taacagccac atctttggtt ccactgatca tccaattacg actgtgaggg gaacagtagg
      361 aatggattta aaaagaaagc aaattctttt ttttgtaagg gtgggggcca tttatcatac
      421 ggcagaggct tccacaggca gtggggttcc cagccatg
//
LOCUS       KCKM01003164             531 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49669apa ultra-conserved element locus
            uce-5032, sequence.
ACCESSION   KCKM01003164
VERSION     KCKM01003164.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 531)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 531)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49669apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>531
                     /note="ultra-conserved element locus uce-5032"
BASE COUNT          174 a           78 c           94 g          185 t
ORIGIN      
        1 aacaacagat ttgaaagtct gtcaagtctc taggtattgt aagatgactt ctgaatggct
       61 agctatgctg gtttttttag tggtaaatga ataaaaaatt ctattatttt gacatatgaa
      121 gtagcaacag ggaaataaat ctccagcttc ttctagttat gttcaatcct ttagaaaatc
      181 tatataacag tctctgtctg aaatgattaa aaaatcaata gcacacttct tttttgagaa
      241 ttgtgttttg ataacctttc tacaagtact gttctggaca tccttcacca cttgcctgga
      301 tgcattatct gtaattgtct tttaatagac tgagactaaa ttattagaaa agaattgcat
      361 cactggggag taagggttgt cagatactag tgagatgtaa tacatcaaat gctgttgtgc
      421 acagtcttat ctcataagct gtttgttttt aggggacatt tttatttaaa agaaaaaaaa
      481 agtttttgcc ccttgtaacc tattcagaac aggtgaaata atgaatgcaa a
//
LOCUS       KCKM01003165             723 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49685apa ultra-conserved element locus
            uce-3924, sequence.
ACCESSION   KCKM01003165
VERSION     KCKM01003165.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 723)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 723)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..723
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49685apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>723
                     /note="ultra-conserved element locus uce-3924"
BASE COUNT          219 a          139 c          138 g          227 t
ORIGIN      
        1 ggggagggca ctgactaata ttaaaggaaa acaggcatag aagatagaat ataactgctc
       61 agccagaaga aaacgtcaat taaaattgat taaataatat agattttttt cacgttagtc
      121 attttgccag tgtgacgaat atttaatcct gattgataac tgaaagctct ggaacacata
      181 ttgggatcaa aaggcactat ataaataaag acattataat gccacatatt tgaccatttc
      241 ttcagttttt aagcaaacat cttccctttg tatcttgtga cctgcattgg gtttccaaga
      301 gctttgcaca atgtagctga tgtcaaaaac acagcataga ctcagagtcg ctaggttgtt
      361 cagctttaat ttctggagca aaacttcagc aaacagtaaa acacttttgt ggagctgtga
      421 aagttcagcc tagctgtttg ataaatgagc agacaggcaa gcagtccttc tttctttttt
      481 tgtatggatt caatgaagcc tgcctaaaga acaccacatg ctgttccagc tactgatcta
      541 acattccgca acatctcagc cttccaaatt ccctttaatt acacattaat cccacccctc
      601 tctctttcat tttctgcaga cagggttggg ggctccacaa ggctgtggga aaaaaggcag
      661 tgttgaagaa ctactttctg aggatggttt ttctgggcta ggggattttt tatttttttt
      721 ttt
//
LOCUS       KCKM01003166             593 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49700apa ultra-conserved element locus
            uce-1025, sequence.
ACCESSION   KCKM01003166
VERSION     KCKM01003166.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 593)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 593)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49700apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>593
                     /note="ultra-conserved element locus uce-1025"
BASE COUNT          193 a          106 c          106 g          188 t
ORIGIN      
        1 tttttttttt ttacagtaat tgctgtctga gcctcaaagg ctaaaaatcg tttttcatct
       61 catgcatgaa gaattttagt ctgattgatg acagctatgg aacctttcct tagtcactaa
      121 gctgcactaa tttgcaagct aaaacaatat tagcaaattg ttaatgatcc gtgaaactgc
      181 tgcagcagcc ttaaatgtta tactcagaac tttcttacaa ctaaagcagc ttacttaaat
      241 tcccgcaatg gacacaaaat gagatgacat ttacaaaaca acaacaacaa caaaaaatcg
      301 tagaagtgac aggcttggct aatgcagtac attagtgtga ataatttgta ttgagggcat
      361 gtgaacaatt aacactaaaa cctaggcctg gtttgtaaca ttttggattt aattttcgtg
      421 ctgagctaaa gctggtgcac acatttccag tgtgcactta atggctgcaa ttttcctctg
      481 tttccatcac catgtggctg gcttttaaaa tgaactgggt ttcttaaaaa ggaaaataga
      541 gtcagttttg aaactaacct gtgagtatca ggtcttatat tgaaacaaaa gct
//
LOCUS       KCKM01003167             445 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49715apa ultra-conserved element locus
            uce-1100, sequence.
ACCESSION   KCKM01003167
VERSION     KCKM01003167.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 445)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 445)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49715apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>445
                     /note="ultra-conserved element locus uce-1100"
BASE COUNT          165 a           65 c          109 g          106 t
ORIGIN      
        1 gggttagaga caagttgttt tctcagggct gagattaaaa acggctccgt gttttgataa
       61 gcattcctct gaaacatggg cagtgtgtgt gtgtgtgtct gaaaacgacc ccaatgaaag
      121 gaaggaatgg gagatgctaa acaatgctgc gcaaagttgc agactgttcg gctacaggcc
      181 agaaaatgaa tccaattttt cattctgtca ttataaatat ttcagtgcaa atggtactga
      241 ttttctgcaa ctgtggttaa gcaaagggcc tccgagtgaa tatttaagaa aaaaaaaacg
      301 aaaaaaaaaa caaggaaaag aagaagacag aatgaaaaaa aatgaaagag aagaggtagg
      361 gggggaaatt aaggctagca accaattaat ttcaaacttt cagcgtaaaa gactctggga
      421 aaaattctac agtgatgcag cgtgt
//
LOCUS       KCKM01003168             967 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49729apa ultra-conserved element locus
            uce-2131, sequence.
ACCESSION   KCKM01003168
VERSION     KCKM01003168.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 967)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 967)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..967
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49729apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>967
                     /note="ultra-conserved element locus uce-2131"
BASE COUNT          351 a          157 c          169 g          290 t
ORIGIN      
        1 aaacacatgg gagggaactg gagagaatct attttttctt cctgaattca tccagtcaaa
       61 ggtggctgca acaaacttcc ttgtacctct ttagagatat aaattgcctc tgagctgaga
      121 aaaagaatct aaaattccag accctgagaa actgattgag aaaactcaga acaactgaaa
      181 taggtgataa aaccaacatt tcccaagtct tacagaacta ttgaaaaaaa gtgtgtgtgt
      241 atataaaaaa acttacaaaa acatatccaa ataaccatgt caaatataat ttctcattag
      301 ccttaaatag gtgaaaatgt ttagtgacac taaacaatac agtattcaaa atatagaaca
      361 tctagtttaa tgcagattaa tttttaacaa gaattcctat gcagtaggca gatagttccc
      421 acattccatt gtgattgaca agcctgacat atggaatagt tcacaaattc ccaggtgact
      481 gacagatgga gaatagaaag gcggataaag ttgcctagag agctgaggac gatttcatat
      541 tcagcggttt tgatcaaaag gattccagat ctcacactaa atttagcacc gctggcaatt
      601 agtgcatgat ttattcagtc ctttcatttg ctggttgaca aatggaaaac aagcacaaaa
      661 ttaaaaataa gtttatttcc agcatttcag atatttaaaa tgtgtgtgtc tttgtttgca
      721 cataaattaa catgagatga atttatagta agattaaatc tgaaatggag atgcaagcaa
      781 taaataagag cttttttatg tatctttcag gcagaacagg tgtttgaatt aagaaatact
      841 aatatgttta gcagcatgac tccaccttta gcattaggga gttgatgctt ccttaaattt
      901 agaataatct ttctacagtt taagattctt tcataagctt ccagcatagg tgaccatctg
      961 taagtca
//
LOCUS       KCKM01003169             590 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49745apa ultra-conserved element locus
            uce-6808, sequence.
ACCESSION   KCKM01003169
VERSION     KCKM01003169.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 590)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 590)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..590
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49745apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>590
                     /note="ultra-conserved element locus uce-6808"
BASE COUNT          193 a           80 c          108 g          209 t
ORIGIN      
        1 gcagaacttg tgctttgact tgtaaacatt gtaaaaatgt atttggtatt ttatttgaaa
       61 tgaagaatca aaatagttat taaaaagaaa tcttcctgta tatatatata ttctgaatcc
      121 atgtatacaa acattccttt agagttcaga ttgtgaagag tgtctttatt ggctagagac
      181 cactgcctcc catggcagag gttacatgtg ctatagtaaa gaacacagtg tgtgaagtat
      241 ttgatgtact gcagtaccat agttcttttg gtctgttaag taagttgcaa tttgtgatga
      301 aatgaagttg aaagtagtgc ttcatactaa caaatttcct tggttacaac ttgatttttc
      361 ttgtaaaact taaaaggaaa acttgaaaat tttatatatt tggattttgt agattttttt
      421 ttattttatt gcaacacaag gtaccaaaat cattaaataa agtacactgt ggtcatttta
      481 ccatggctct agagtctttt taaaaccctt ttatccaggt ggattggcaa aaggatggga
      541 acttctgagc ttctgaaatt attactgagc aagacaaaag atggcccaga
//
LOCUS       KCKM01003170             319 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49759apa ultra-conserved element locus
            uce-7843, sequence.
ACCESSION   KCKM01003170
VERSION     KCKM01003170.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 319)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 319)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49759apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>319
                     /note="ultra-conserved element locus uce-7843"
BASE COUNT           99 a           57 c           64 g           99 t
ORIGIN      
        1 gtaattcatt tatttattta ttttatttcc agagctgaaa aatacttctt tgatgaatct
       61 gttcctcacc ctaaagctgt ctgtctgtta ttcatcagaa agcaggtcgc agttcagtga
      121 gcagaagaaa agattttaat agaagctgtg ccaagggctg taatgcatca ttttagggcc
      181 ctaattacat tacaatgaca aatatcaatg gtgacaacag caataaccta catcctttaa
      241 tggctatgct ggaaaaggag tttgggcgct gcgccatcag attagacttg gtttcaaaac
      301 ataggccatt agaagtgtg
//
LOCUS       KCKM01003171             530 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49773apa ultra-conserved element locus
            uce-7632, sequence.
ACCESSION   KCKM01003171
VERSION     KCKM01003171.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 530)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 530)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49773apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>530
                     /note="ultra-conserved element locus uce-7632"
BASE COUNT          144 a          112 c          109 g          165 t
ORIGIN      
        1 tcaaatatga gttggaagac ccttttcttt tattagttgc taagctcttt atacttttac
       61 catattgcgg caggttagaa gtctgagctt tattgtctta tgttattgaa aatccagatt
      121 cccgcagcct tctccctcag gtcaagattt gtctgagaat acattctcat ttctccatgt
      181 acaaaggctg tctggagaga ggcagaaaaa gattatgact gtaatatact taaatccaat
      241 ttatttgcct gactagaaac ttccacactt cacaattgct tcctacagaa gattttctat
      301 ttaattcctt catcgcagca agaagcggga gcgttcttag tcctccaaca ggtctatacc
      361 cggcccacac ctgagccagc tggagcacgg cggaggagaa gatgaaaata gcaaatggcc
      421 acacttattt tgcatgttgg cggtttactt ctgcttaaga ataaagaatt tgggcgggat
      481 ctttaaatat cctttgcccg cgtggatgag cagatggttg tgagcttcac
//
LOCUS       KCKM01003172             953 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49789apa ultra-conserved element locus
            uce-6602, sequence.
ACCESSION   KCKM01003172
VERSION     KCKM01003172.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 953)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 953)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..953
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49789apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>953
                     /note="ultra-conserved element locus uce-6602"
BASE COUNT          295 a          172 c          194 g          292 t
ORIGIN      
        1 ttctcttctc tccacagcca agtgcatgta aacttggggt tttcaggtac cacaataacg
       61 ctattaaatc taatgcagaa ttccagatcc gataagcgag caggctgact gtaggcatag
      121 gtgagagctg tggtggatgc agaccaggga gcaagagaag gctcatttct aagttgaagg
      181 aacgaacccc aaacaagggg ccatatcact acttctcatg gttgcatttt tttttaacat
      241 gtttatagta aatacaatag ctggatactt ccccttcggc agattttgac tgtttgcgag
      301 actaaactgc aaatgtgttt attgctgaga tgaggtttac atttgaaact agttcctgaa
      361 tttgcagctt ctttcatgca gccagtatca gtccaagtgt ggtggagttg agtctagcga
      421 aggcctcttc ctgtcataaa taagattact ttcatttcac ttgtggagtg tgttattcct
      481 cagagtaatg aatttcctct gtgcctttga gcacataaac atggttttca ttaggtttct
      541 attaaaaaaa aaaggcagag taaaattaat aagaagacta ttaactccat aaatgcagat
      601 gtgttttcac tgtataacca tgttggaagt aaacagcttc ttcactgaag actgcaaatt
      661 gctgagaagt aagcaattct gcagacctgg attctgctcc cggagaacaa aagtaggtgg
      721 attcacaaac aggctcctta ggaggaaaaa tagactatca aatctagtgt agacagacaa
      781 atagcctcag gctttctact taatatgtaa catatgtgat aataagaggt ttaagccata
      841 tattcagaat tagcactaca gctaagagtt tgaacattgc attttttttt ctttaccagt
      901 tatgtctctg cagttgtaga ataaggaata gcaacatttg caaatatttc act
//
LOCUS       KCKM01003173             622 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49803apa ultra-conserved element locus
            uce-6584, sequence.
ACCESSION   KCKM01003173
VERSION     KCKM01003173.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 622)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 622)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49803apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>622
                     /note="ultra-conserved element locus uce-6584"
BASE COUNT          208 a          108 c          103 g          203 t
ORIGIN      
        1 tagcacgtga taaaaaccat cacagtttca ccataatcca gatcaggttt tttatgttaa
       61 ttttcttaca tttaaataaa atctgccagt agatctttaa gatgcttttg aggagaccaa
      121 aacaattagt ttaatttgtc aataaaaccc agaaataaat gagctctaca gctaatttac
      181 tgaaagagag agacttctct attatttctt tttaacaact ttgaccacac tcagtctagg
      241 gagctccata caaaagatat acaggactgg aaaaaaataa ctgattaaat tttaaccagc
      301 tgctgggcag atagtttgcc tcaggcactt ttgtcagttt caaagggtcc ttttattaat
      361 tttgcatttt gtattttgtt agtggaaaga gctagctctg ttgggactgc caaaagctat
      421 aggcagcaaa tcttagagca gcaaagagga agctgtagag catgccaagt agatttagca
      481 cactgagcac tctaaattac atttgtttta tcagtcctaa aaatatatta acttcaggta
      541 taagttcttt gaataaagcc ttaaagctag cacatccagt tccttctctg tttatataag
      601 gcttttactt tgtctataaa aa
//
LOCUS       KCKM01003174             988 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49818apa ultra-conserved element locus
            uce-6127, sequence.
ACCESSION   KCKM01003174
VERSION     KCKM01003174.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 988)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 988)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..988
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49818apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>988
                     /note="ultra-conserved element locus uce-6127"
BASE COUNT          316 a          209 c          179 g          284 t
ORIGIN      
        1 tcttacctat gcacatccgt ttggacactt tcttggtttt ctcccagaga agatctgtct
       61 ctcactaaca atgtcatatc tatatcttgg taataaacct aaatgctatg caactacata
      121 aaatagaaca tgtagtacct cattaaaact gtaagaagga ggcatattag tggtagctat
      181 ggattggtgt gctgtaagga ttgagacagg acttcaaaaa ccattctgct gaatttctga
      241 agagaagttt acagcaaaac caagtccaat aaatttcatg tacagtaaaa gcagcagcaa
      301 gcctgaggaa aattacacag gtctagcgta acagtcaact ataactagct cagctaaaga
      361 gagatttcca tttcttggca cagtaacaaa tcctcaagca gagaggggct aagggtgaga
      421 ttttttcttc tgtaagtaac ttaatgaatg aagtactaat taacattatg gcattgataa
      481 atggagagag agattaagga tgtactcgat attcaggcct tcccagatgg accgtcaaag
      541 ccacattaat tcctatctca ttggagcatc tgcttctccc ataatccatt gccccttggt
      601 acaaacaaca caaactgttg tgactcaatt cgatttatat caatctaatt tcttttaatc
      661 caatttgtat tccaatctac taccttctaa tcacttaaat cttcagcctc catctggtaa
      721 attttctctc aaaattaacc gagcagatgc ctctgcaatt gtcttccaca gtcaggctaa
      781 tcatgccctc gcagtggcct acagagcaca ctgaataggt acgtgactta cggcgttgcc
      841 cttcttatta caaacatggc gatgcaggaa ggccattttg tccgtcatta attgcttaat
      901 ttgcataaca ctgccaggga aagatgccta ggaaacaaaa gccaagagta aaaggcttca
      961 agaaggcagc atgacatgtt catcattt
//
LOCUS       KCKM01003175             884 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49833apa ultra-conserved element locus
            uce-5135, sequence.
ACCESSION   KCKM01003175
VERSION     KCKM01003175.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 884)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 884)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..884
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49833apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>884
                     /note="ultra-conserved element locus uce-5135"
BASE COUNT          280 a          165 c          169 g          270 t
ORIGIN      
        1 ggatttctta gaatttcagt cagatttgac attcgagttt atgctgttat ttgtagcaat
       61 aacaataaga gcagttaaag ttcaacagac ttcatccata ggtgccgcat ttgcatttca
      121 acggtagtgc acggtgaatg tgttttatat agtctctcct cactgaaaac agccatggtg
      181 gtggcagcaa tattaaagtg gttagtaagg atgcctcagc ccaggccacc acatagcaac
      241 cactatgttt ccaaggacaa atagctcttg cctgccctaa gcaactggat gagaacatca
      301 aaacatagct tgtgagagac ctctaatacc cattagtgtt agcaactgtt acctcaatca
      361 tgaatgacac agccctaatt attaaggtaa ttagaagtta taacactggt aatattaaag
      421 ggagaacttc taaagcccat taacaatgtt actttaagtg atctggctgt gaactgttca
      481 aatctctaat tatattatac gtctgtctta aaggatgatg taattaagtg atgggagagg
      541 gaatgaatat atagtgacta ctgtgttaca ctttgtaagt actattttca cagaaaccag
      601 gctcagtaat gtcattatgt catttaaggg tgggattctt tgctcgattg tataccacac
      661 gtagctaaaa aaaaacctgt tctcagaata cataaaaatg atatatcatg gtttaaaata
      721 attatcaaaa ttaagttgga ttggctgcat tgttcatgca tgccgaagcc atcagtgacg
      781 tactcatgcc acctcaaatg gcactgcact ttcacatcac cctttactag cataagtggg
      841 taaataccag tatcttattt gtcctatctg gaggaggtct actt
//
LOCUS       KCKM01003176            1128 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49848apa ultra-conserved element locus
            uce-683, sequence.
ACCESSION   KCKM01003176
VERSION     KCKM01003176.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1128)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1128)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1128
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49848apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1128
                     /note="ultra-conserved element locus uce-683"
BASE COUNT          370 a          262 c          180 g          316 t
ORIGIN      
        1 agataactgc tctgaaaaag aactcgattt tgtagcaagt gtcaaagaca ttttctataa
       61 gaaatctcaa ccttaagatg ttacttcaca gtttaagttt taatatccct ttaacacctt
      121 tacgtcttgt caatttgctg tcagcaacta catcctcaga tgcaacagtg aatacaatgt
      181 attttcctta gttagtattg agggtctagg gtctgctcca gctgccagcc agaagtattt
      241 gcctttctgc tcatttcttt tccatctcag cctaacacca ttaccattgt gactttgaga
      301 aagcggcaaa gacataataa agatgtacat ttgtatatat tttccccttt gaaattgttt
      361 ttgcacatat gaaggtataa actctcttaa aaaccatccc tgagccatct acagctttca
      421 caaaaagctg cttttaaagc tgtctagctc tcttccacct gatcctataa acactgctgg
      481 caatttttcc cccatgcctc taacatattt tcacttagca ccagtttgat gtataagatc
      541 tgacagccag gcagttatag gccacctgca tcactgtcgc catgacaaca ctgaaagaca
      601 atccatgatc ccatgccctg gtcacacgtt tcaatacagc ttatctgtcc aaagccactg
      661 agtctaatgg aagagagtaa ttacaatctt ccactcattg tcaaaattct caccatataa
      721 tgctcttcaa aatcatttta ttcctttcac atggctgctt tgcaaacaaa aaaaaaaccc
      781 caatgaaaca acaacaataa caaaaatcaa actacaacaa accaaccaaa aaaataaaca
      841 ccaaacaaaa ccaacagaag ccttaggggg gttgagaggg agaacaagaa ggaaaagcaa
      901 ggctgtgacc aatacaaaga tgtagcagtg tgagcaaact gtctctttgc agcattaaag
      961 gactaatcag aaggagggga atgtaccaac cactaagagg gataaatgaa aaattctctt
     1021 ctattcgcag agcatcactt aagatccttt tggctttgca atgaaggtgg agagaggata
     1081 tcagctgccc tctttttccc ctccccttcc tggaaaactt cttcctat
//
LOCUS       KCKM01003177             938 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49864apa ultra-conserved element locus
            uce-4293, sequence.
ACCESSION   KCKM01003177
VERSION     KCKM01003177.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 938)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 938)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..938
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49864apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>938
                     /note="ultra-conserved element locus uce-4293"
BASE COUNT          324 a          159 c          177 g          278 t
ORIGIN      
        1 aaaagaaaac agaaaactcc cacaaaatag ctttctgaat ttgacatact tggaaagaaa
       61 ttctgcatgg gcttccagat tcaaacaaac tcaagaaatc ttccagatac ttggtctttt
      121 tcccaaaaaa atttcctgac tgacatgtaa gatcaatgaa acaatatcat ggtaataata
      181 tagttgaacc tgctgcagta atgaaattgt aagtagaaag acagcaggca gaagacctca
      241 aactttcact tgaaacaaaa tattcagctt tatttagcct gttttttttg tgtcagattt
      301 ttgagtgaaa aagtagcccc acttgtcaat cagctaactt gcagtgctaa tagattctgg
      361 tgtttagggg gtcagcacag aatttaattt aacaacttac aatacgccca catgcccaga
      421 aaatgtggac agcttgatag ggttcactga gccaaagaag taagaccaaa acagtgcatt
      481 aatgtatagg ggaagaatag ttgcaatcag ttcccttgtg aattgcacag agaacttgga
      541 gatgaagcaa ttatcagcca tcggggatta atagtaaagt gtgaatgcca agctgtatat
      601 gttaggggca gaatatgttg cctatagaaa acaacaaaga gcgtttctta ctattaagtg
      661 agattaaacg taatggcctg atttaatcac aaaggcagaa ttaaattcag atggcaactt
      721 caaagtggac acatgcacag aaactactgc atacatttac atatagctgg catagcttgg
      781 cttgcatcac aatgggagaa agtttctttg gccacttaaa caattttcta ttcttgcctt
      841 tttgttaaca ttcactgtat ttagctctaa attgctttta gttaataaga tggagctaag
      901 agttatattt attcatggaa gctgtacttt ttaattct
//
LOCUS       KCKM01003178            1065 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49880apa ultra-conserved element locus
            uce-191, sequence.
ACCESSION   KCKM01003178
VERSION     KCKM01003178.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1065)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1065)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1065
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49880apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1065
                     /note="ultra-conserved element locus uce-191"
BASE COUNT          312 a          197 c          264 g          292 t
ORIGIN      
        1 gcgcacgact ctggtttgtt gccttccgcg tggttttgct ccgctggatt tgccgctctt
       61 ggcgggcttg caggtagctg tctcgggagg gaagaagacg cttacctggg actcgtccag
      121 gacaaagctg ctgtgtagat gttccgtcaa cgcaagggcc acctcttgaa ggagctgctc
      181 tgctcttcag cgcggtgtcg ggcctacctg gggaagcgag gggcagttgt gttgacaggc
      241 tgtggtataa ataacccttg aggcacggga gccgcagagg taatgaagtg ccttgaggga
      301 aaagtcttaa ctatcaaggg atggatccac tcccccctgc cacaaaccag aggtcacgtg
      361 gctgaggaat gtgtatccaa agataatgct accttcagag aactctactt acaggtaagt
      421 aactcttctt taaaggaggt atctttgtgt ggcagactgt ttatgggagc aatttgaatt
      481 gaactttaaa tgaaaaaggc atatctctgt aagtggtaat aattttagtc atctcgctgt
      541 ggctaggggt tgtggaattc attagcacag attaacatat aaagtgggtg agatatctaa
      601 tagcaaacgt agaggtttag ggaccttaat tcatcactga atgaacagcg tgtacagtat
      661 tagggactat gaaattttta atttacacaa agtgtccaag aatataggga ataaatttaa
      721 acccaaaaca gataatggag ctgtgccctg cctagctggc aagttgaatt gtttttacac
      781 tgagtgaaga aagctaatta tcccaagcac aaggagactg ctaaaaataa taagattata
      841 aagaataatt tgctgatata attacaacaa aattgggtac acacaatcgt cagatacatg
      901 tattgcttga cctgggcgag aaagtgaaat aaatccttcc tctatagcct tcgtaaattt
      961 gtttttatca tctccaagtg gtgtttgcac aggcagcaca atttgcatgt gtaatgtggc
     1021 tgtacaaatt gacaacaagt aaattattca aggaaatagg ctggt
//
LOCUS       KCKM01003179             750 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49895apa ultra-conserved element locus
            uce-7849, sequence.
ACCESSION   KCKM01003179
VERSION     KCKM01003179.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 750)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 750)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..750
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49895apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>750
                     /note="ultra-conserved element locus uce-7849"
BASE COUNT          275 a          145 c          133 g          197 t
ORIGIN      
        1 tcaaaataaa caaaatatgc tgaaaaaggt tgagaaaata agaggattta aataaaaacc
       61 aagaatacat tttcatcagt aagtaccatg aaacagctga caacttttaa atagttgaaa
      121 ggttagggaa atgtaaaaat atgaatagaa ataagaaaac aactttccat ctcctttctc
      181 gagtctccaa ttcacaaaaa catcacaaga aaacatgccc aaaagattgt attaatgaac
      241 ttcaataact gtacttaatc acaaaatcta gtcaggaaca ggctgctacc ataaggtaag
      301 acaggttgca gacagtagtc ctttatgtaa aaagcaaatg tcaaaagaaa agctctgata
      361 tttggttgtg ggctcccact tttcacatag gcatttccta aatccatgtt tgatgagctt
      421 ctccagctat aaattctgta aattccctct ggagcagtgc agagtgtgct tcatgaaaat
      481 gtcatctgcc agcgctgcaa ttactcacac tccagcaatc atgtgcacaa tgcagaatgg
      541 gtcgaattca ggtgagaacg agaaccagta atcaagcctc tggaattgag aacaaagcca
      601 ttttctttca tttgccatca acacaaccat caaggcctta attacaaggc aagtgtcaag
      661 cctggctgct gaaaggctta ttattataca gctcagcttc aaatcagttt tgtattgatg
      721 aactgcaaaa atgaggaagc tagcttagcc
//
LOCUS       KCKM01003180             427 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49910apa ultra-conserved element locus
            uce-1765, sequence.
ACCESSION   KCKM01003180
VERSION     KCKM01003180.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 427)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 427)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49910apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>427
                     /note="ultra-conserved element locus uce-1765"
BASE COUNT          161 a           72 c           70 g          124 t
ORIGIN      
        1 agcctcatca tttcataaag agttgttttt ctacatgatg ttctctatgt gcagaatgtt
       61 aatagctact atagctgaat atgaataggc tttgtagctc cacttgaaat atagaaaaat
      121 ggcccagaca ttaaaaaaga taaaagggaa aagggcagta atgaatttag aggaaaatga
      181 acattaatgg tactagcatt acctcatgtt ccacataaca aattattgga aatctgtcaa
      241 gcacaccaaa ttatctactc atctgctgtt gtggggccct ttggagccat ccaaaaccag
      301 caaaagcaag acaatttaag ctaattttac tatttataac aatagaacag accattaaga
      361 taaattaatg tcattatcaa gtttctatga aaatgacaaa taccgctatt tcaagcagct
      421 ttagaag
//
LOCUS       KCKM01003181             862 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49925apa ultra-conserved element locus
            uce-1963, sequence.
ACCESSION   KCKM01003181
VERSION     KCKM01003181.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 862)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 862)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..862
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49925apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>862
                     /note="ultra-conserved element locus uce-1963"
BASE COUNT          246 a          154 c          158 g          304 t
ORIGIN      
        1 ttttaaaagg aaaactgctt ccagttgaga gcttgcccca actagttctg ctttgactca
       61 gcttacttaa tattataccc ctctgttcat aataatgagc tgttttgtgc aaagcagctc
      121 attattatga atataagggc atgtttggac tagtaaagca aatcataaaa attgctgccc
      181 gtgtcacgtt tttcctttgt caatgaaaga ttttcctcgg ggtcagaaac aattattgac
      241 cggagaaaaa tctcaggttc tatttggaaa ttttacccga tgattctgga agcaggggag
      301 taaagttatg aaactaaaag tatgtgtggt gaacattatg tgcaaggtct tttatgttaa
      361 ggaaatcatg acatctgcca atctttcaaa ttccaaaggg taaagaatga ggtctgttag
      421 gctgtcattg aacatgacaa gcttaatgtc aagtttataa cagaaaaagg gcaatcttat
      481 tgtggtttat tcagttttat gttgcttgtt cagtagaaaa gctcattttt tatctaattt
      541 atagcatttg aaataccaaa cagatttttt acatatctcc tgagctcaca gctcctcttg
      601 actacccctt agtcgttcct ttagggagca gtcttaaatc cttccaattt agcatctatg
      661 tgagactaga caattgtttt acttgagcat atccttcagt tgttatagag ctgtttctaa
      721 ctccaaacat tttagtttaa ttactgctta gaatatttgc tatatttttt atctaggttg
      781 cctctcactt gagcccattg ggctgaagaa ggaattactc cccatgctgt tctgtagccc
      841 ttcttgttca gatctgtaat tg
//
LOCUS       KCKM01003182             353 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49941apa ultra-conserved element locus
            uce-6702, sequence.
ACCESSION   KCKM01003182
VERSION     KCKM01003182.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 353)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 353)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..353
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49941apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>353
                     /note="ultra-conserved element locus uce-6702"
BASE COUNT          103 a           71 c           56 g          123 t
ORIGIN      
        1 tgtttgagta accctcctcc attaagtaca tgaatcttta cccctccagg ctatgttaat
       61 ttgcatttta tctctgccac tcttccacac ttttatttca ctcttgaccc tgtttctagg
      121 agatgtgcga gtaagaagtc gggcaggatt tgaaacagag agaagaggtt ctcatccata
      181 cattgatttc cgtatttttc actgtaagta tttaaaagca gataaatggc aaataaacga
      241 aggcttccat taattttaac tactgagcct ctaaaagtaa ggttagcacc ttatatagtg
      301 agaccatttt ttatatttct taggaatagc tttcattcta cttcattacc aaa
//
LOCUS       KCKM01003183             298 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49956apa ultra-conserved element locus
            uce-144, sequence.
ACCESSION   KCKM01003183
VERSION     KCKM01003183.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 298)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 298)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49956apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>298
                     /note="ultra-conserved element locus uce-144"
BASE COUNT          106 a           61 c           50 g           81 t
ORIGIN      
        1 ttatgttgca tcacacagct cagagcactg gcacaatgat gaaccacaat ccagattttt
       61 cagcttaaat ggctttacat tcaagcaagc aaattaacca taaaataaag gtacaaaata
      121 tcccaagaaa gaataaactg cagataataa gcaccaatct ggtgttgaat gcagcccaag
      181 ataccaattg ttttaagtca cgacaaagac agctgaatgc tcatcttgtg gatatagagc
      241 atggatgatt gcttgccatg agtatcttct ctcacaaata acagtttttt cgctctta
//
LOCUS       KCKM01003184             628 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 49971apa ultra-conserved element locus
            uce-5085, sequence.
ACCESSION   KCKM01003184
VERSION     KCKM01003184.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 628)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 628)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49971apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>628
                     /note="ultra-conserved element locus uce-5085"
BASE COUNT          154 a          125 c          133 g          216 t
ORIGIN      
        1 taggtagcat tttatccctt taaccttaaa aggttgtatg aatttgtaag tgggtgggtc
       61 tttcctaata tttttttctt gtttgtaaga ctttgcgtgc tgtttttata atgttttcat
      121 tgatgtcaag accttggtat aaaaacaaga ctagcactgt actaatttac cccatgttct
      181 cctgtgtctt cctttgcctc tgttcttgag caactggcat agctgcagga ctgtttactc
      241 cacggcttat ttccccttta tctttgatgt ccctggatgt caaaggctgt gaatttaata
      301 ttgattttat aaagtacttt tactgtaaca tgtcagttag gattagcctc aacctcgagg
      361 aagctcaggc actgagctgg atttgcacgc aatgtggctc tccggctctc agactctttt
      421 cccgagcgaa tgctttattt ataagagtga cagtgtgctg tgaaagcagg gatagcacac
      481 agcccccagc tatctctgtg tcttgtatac acaacgtcag tgccctgtgt atacattagg
      541 cttgaaaatg taagtggatc agagagacgt atcatttgct ggtatgtaaa cagacagatg
      601 agtttataga tcgcattaga ccccagtg
//
LOCUS       KCKM01003185             968 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50001apa ultra-conserved element locus
            uce-3059, sequence.
ACCESSION   KCKM01003185
VERSION     KCKM01003185.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 968)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 968)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..968
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50001apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>968
                     /note="ultra-conserved element locus uce-3059"
BASE COUNT          318 a          221 c          160 g          269 t
ORIGIN      
        1 aaaacagagt cagaaggact ggaaaagcca cttgactggt tctcctgatg cctcctcagt
       61 acaggttgct tagtatccta attaataact gtcttgctgt cgtattcgga caagctcctt
      121 gatgactagt tctgtttcca gtttccatca gtggtatcat catggctaat aaatcactaa
      181 ctgcgtaaca gccgatcact gcattacatt tctgatgtga tgccactaca tacagaacaa
      241 tgtatttaaa agtgaagttg gctcttcttt taacctctat ctctattgct aaacattaga
      301 aaggtgcagt tatcatttca accaccacca aaaactgcaa ggaagaccac atatgtagtg
      361 agcataagag acagaagtga cagaaattga taaaaacttc atcacatggc tgacacgcca
      421 tatatcaaag ccctaaatct cattctctgc ttgcctccaa tttccatcaa agcctgccag
      481 ctgcacattt attgagaagt ttgtgatctg acagccactg tattaccaac attaatgatg
      541 catcagtctc tagaattact ggggaaacag tccaattgat tttattatta taccgagttc
      601 ctcacatttc atttcaggca gcttcctacc acaaatttta gcaataacta aaaatgctac
      661 acagctgatg cacaaaacac tagggcaaaa tatggttacc acagcttcat gccacttcat
      721 tctccctcca ggagagctcc aaatcactca gacaccactg tgtaacccat gagttattgg
      781 tccataacta aaaggacttg cacattatgg tgcgatgaag agtgcaccac tagtattcac
      841 taatttggcc aagaaagcta cagacacaaa agtcttataa atccctgcta ttgacaccag
      901 ataaaaataa aatatattgc tgtatagact gaaattgttt ccacagatac cataaagaaa
      961 gagtgcac
//
LOCUS       KCKM01003186            1158 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50017apa ultra-conserved element locus
            uce-5991, sequence.
ACCESSION   KCKM01003186
VERSION     KCKM01003186.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1158)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1158)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1158
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50017apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1158
                     /note="ultra-conserved element locus uce-5991"
BASE COUNT          332 a          223 c          261 g          342 t
ORIGIN      
        1 aggaaataaa tctgaaatac ttgttcccca cccatttttc ctccagccgt tctcatccat
       61 aagatataaa agatgctaat atggctcagg catcttaaaa atcataagtt ttgcatgata
      121 actattgtct attgccgaga gtcctcacga gtcaaaaatc cttctttcag acttagactc
      181 agtttacatt ttgttctttc agtactttaa ctctggatgc aaaaggtttt tctgttgact
      241 tctctgccat cctctgatgt ctgcagatat ttgatcagct ctctattctg tgcgtagcgt
      301 ggtccttctc tggcagctac acacatggag ggggggaaaa tgttatcaat aagttcagag
      361 gagcctcagc agtctcagag aaatttcaca caaacataaa ccaaaaccta acccctgtga
      421 cggggaaagt ttacatcgcg ccagatttta gcagctttct tgtgcctttg gtgagatgtc
      481 aggagtgcag gtgattttaa ttttcttgta cagagaggaa tggagaagtt tggaatttgc
      541 atgcatgatc aggacctgtg tttgggaaaa tgtaaactca tcacagtgga aaatgtgttg
      601 tttggagtct gagggtgaaa acaaagctga ggattttgga gagactgcct gagccagatg
      661 gcctggtgca ttcccagtct ggcagcccaa ctgctccctc ctgtataata tacagccatt
      721 tgttctggga tatttactct agagctgttt ccatgtgaat gtttgaaaac cattaaaaat
      781 gaacatatta ggagagataa atttatttaa tttgtgcgaa tacgtcgata agcaggctgt
      841 gtatcaaagg cagagggaga caggataaaa taattagatg cttctgaatt gtgcattgag
      901 agacagagca agaacgagcc gtcctcgccc tgggtcccag cgctgtgctg cttgtccggg
      961 ataaacctca ctgggatgag tcaaaatttt gcctggggaa ggggtaaaaa aattggataa
     1021 ttaggggtta agtttccaaa gccaaataaa tgtaattcac agtattttct gtgtagatac
     1081 acagtggata caagcctaat cctctctggg tgaaattctg gcccatctga agtcaattgc
     1141 aaagctccta ttgaattc
//
LOCUS       KCKM01003187             561 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50032apa ultra-conserved element locus
            uce-6176, sequence.
ACCESSION   KCKM01003187
VERSION     KCKM01003187.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 561)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 561)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50032apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>561
                     /note="ultra-conserved element locus uce-6176"
BASE COUNT          170 a          101 c          118 g          172 t
ORIGIN      
        1 gagagaagcc tgtcgttttt ctcctgctgc actactgtat gtgtaaaaca gcgtgcaggc
       61 aagagggggt taatgcaata aaataaatat aaaatactct ccaggctgtt ggacagagct
      121 ggaaggggtc agaggttgct gagctgcttc actagcacac taatcgattt gctgtcaagg
      181 tagtggtgct ggggtttcaa gtaagagaag aattgagtgc cgctcgggcc caatttccat
      241 aattgctcac tgcctttagt gtacaacctt ttatgaaaca caaaaaatat atcactgaat
      301 tgtattgatt agccattggt ctgaataatt cacttagtat ttattacctg accctcagag
      361 gttaaataaa tccactaact ttggcttgtg agaaatatta cttattcatt gaaacgtgga
      421 ctgattatta cacaataggg gtgtatcttt gttgttcttt ttatctcctc ctggaaaact
      481 tagcccccgc tgcatcttaa tggcaacaag ttaaaagaaa tatttatgga tagtgaagag
      541 cattttccaa aataaacagt a
//
LOCUS       KCKM01003188             568 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50048apa ultra-conserved element locus
            uce-3973, sequence.
ACCESSION   KCKM01003188
VERSION     KCKM01003188.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 568)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 568)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50048apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>568
                     /note="ultra-conserved element locus uce-3973"
BASE COUNT          175 a          110 c          125 g          158 t
ORIGIN      
        1 catgtgcccc agaagagaaa agtttggaga tgtcagctgc aggtacgcct ctcctccttg
       61 attttcagct cctcaggtct gcagttgcta aggctggagg aggatgccct cctctggcta
      121 cgcatcccct tttcatcaag cctcggaggc tgaagagaaa tcactttgaa cactgaggcg
      181 gggagctgga ggcaattact tgtgattgat agcactaaat atgaaaccgc atgtacctca
      241 tccatgaagc atggaatcag cagcatattg ttagtggggg agatgaatgg ggcttgagat
      301 aaccttggca aattaggcat atgttagcat taagctttgt cagtaagcag gctataaatt
      361 acagacatat tgtaactcca taaactcatc taatgaattg aatgacagtg gtaatttaag
      421 gcagaatgga actgtttaac ccttttaaga atttagctgt atttctatat cacacaacaa
      481 tccaaaatgt attaaaaggt tggcatttca tatatagtgc aagatattat aatcataaca
      541 gggaaaaaat tcttccatgc aacctctg
//
LOCUS       KCKM01003189            1091 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50064apa ultra-conserved element locus
            uce-3071, sequence.
ACCESSION   KCKM01003189
VERSION     KCKM01003189.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1091)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1091)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1091
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50064apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1091
                     /note="ultra-conserved element locus uce-3071"
BASE COUNT          299 a          200 c          287 g          305 t
ORIGIN      
        1 gaagggacca tatgtcacgc attaccctgc tttgcatttt gatatatgtc aagcagtgag
       61 taatcctgca tcttgtctga gcagagatgg cactgggata attttttgtt tgtttttaat
      121 gggagaaggc gatcacactg cagggaattc atttaaatac gggggggcaa tatactttta
      181 aaggtgacgt taagaaaagg gggttatcca gggtagcaaa ccattcaagt ccacgcagac
      241 tttgaagacg gaggtattgt cgtcggctac gagcgccgtg tttaggcatg cgaaatccag
      301 tcagagaaag cgaaaataac tccggccttc tattgccttc ttcaaagtat tgctgaggga
      361 agtttggcag aagctgggac aggaaattga aatctgaata ctattttaaa ctgatagggt
      421 taaaggcctc tcttttacac cagcacactt gttctttcat ttgatacttg aactctgtga
      481 attttctgtg gctgtctagg gagaaggagg agcagctggc tcgggtgaca gaggtacaga
      541 ggcggcaagc ccagcaggca gatgctgccc tggaggagtt taagcggcag gtggagctga
      601 actcagaaaa agtctatgct gaaatgaaac agcaggtgag gaggtcacaa tgccagcctt
      661 tctgaaagtc tggctcagta ggatagcgta ttctgatctt ataatgccag aaacatgctt
      721 cactggagag tgctacatca aactcgtttc acaatgtagt gtctttgctg gcaagtcaaa
      781 aagggatgtt agcagttgtt tcatctttct aacaaagcca gaattgtcat tgttataaag
      841 atatctgcgg ttgtgatact gattagggat ttttcaggag tgagagtata aagtgttagt
      901 ttatacaccc ctacggaacg acgttggtaa tattcggctt aaacgtgggg ctcttcctac
      961 tcttttcaga acgactctgt cttcccttaa tgaggtgttg taatcagttt gagcctaaac
     1021 aggggcagag gcgttgtggc tgttggcagt cgtgcgcaga ggacagaaaa atcttttctg
     1081 accctgaaaa t
//
LOCUS       KCKM01003190             474 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50080apa ultra-conserved element locus
            uce-5399, sequence.
ACCESSION   KCKM01003190
VERSION     KCKM01003190.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 474)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 474)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50080apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>474
                     /note="ultra-conserved element locus uce-5399"
BASE COUNT          130 a          110 c          117 g          117 t
ORIGIN      
        1 ctgcagagga cgtgccgtgg ggaccaccct ggccctccca ccgggcacaa gccgggcaga
       61 gcgaggagga gcacggtcac gcacggcctg ggcaatgcct tcaccctgcc tcacctcctg
      121 cggggccacg ggcacgcaga gcgccacgcg gggaaaaata tgctccagaa cgggtcatct
      181 attctgtacc cttgttattt gcagctaagt ataatggaaa aaattgactg tttgcttggt
      241 gcaatagggc atgactctgt ttacacagaa ataatagcta aacagtgatg gattctaaat
      301 ctccattaca gtgaaagatt tgaaggagta aagcagttag aaaaataatt ggttttcttg
      361 tttagcttta aaaagccttt acacactgcc aaattgagaa gacttctcac tttattttgt
      421 ttttcctttg ggggggtgtt atattaacag agggaataaa accagcccca acct
//
LOCUS       KCKM01003191             530 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50095apa ultra-conserved element locus
            uce-2445, sequence.
ACCESSION   KCKM01003191
VERSION     KCKM01003191.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 530)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 530)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50095apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>530
                     /note="ultra-conserved element locus uce-2445"
BASE COUNT          162 a          132 c          103 g          133 t
ORIGIN      
        1 ataagaaata ataataaaaa aagagagaca gacacactga tggacttatc caaagacttg
       61 tgaaacagac ctcgtaatta tttcatgttt tacaaaatgc tttaatttgc gactatagca
      121 aaaaacccgg cgagcatttc atagttggga acaggctcgt gggttttttc tcctcactat
      181 aggacaagct ttttgcaaga actgaatgca agacccctga ggagcctacg ggaacagaac
      241 caccaaatgt ctggttgcca tctgttctac ccatttactc tcccaatatg taaataaacg
      301 tcagcgagcg cggggaccag tgaaacacac ggttgctctg taaagtccac atttcagcct
      361 ctcctcctga tgagcagagc agcggcctca gaagcacgct gagaatacac catgaaaggc
      421 tcttttggga cttgacagcc tcccctttga aacaccaccc ccctcataaa taaagccctc
      481 actgtctaat ggatgcacgt tttttttttc cagtgtacaa ctcctgaacg
//
LOCUS       KCKM01003192             246 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50110apa ultra-conserved element locus
            uce-7508, sequence.
ACCESSION   KCKM01003192
VERSION     KCKM01003192.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 246)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 246)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50110apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>246
                     /note="ultra-conserved element locus uce-7508"
BASE COUNT           69 a           47 c           69 g           61 t
ORIGIN      
        1 gtgaggggac attagcactt gctgtagcat tgccagtgct gatgtaaatg gacgtgctac
       61 atagtcaaca agacacactt ggctgcctgc aagtgggaag tacttaaatc ttggcactga
      121 taaatgaaat atttttaagg gagctaatca gtgaaaatgg ggtttcatca ggcactgaca
      181 tgtctctctt gcttcagcga gtccgagaga gaaaaatgat tgtgcggcgc ggtccggagc
      241 cagacg
//
LOCUS       KCKM01003193             658 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50126apa ultra-conserved element locus
            uce-7113, sequence.
ACCESSION   KCKM01003193
VERSION     KCKM01003193.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 658)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 658)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..658
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50126apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>658
                     /note="ultra-conserved element locus uce-7113"
BASE COUNT          193 a          129 c          146 g          190 t
ORIGIN      
        1 cccctgctag tataatctag aaacagcctg aaacatataa aaagcccaag attatttcaa
       61 agctctggaa aagaaaaaag gggaggggag cattggaggg aaagctgtga aagatcattt
      121 ctttcctaat gtgactgtta gatttggctg ctttagcaat taaacttttc ctttatttgt
      181 tacccctaca gacccctggt tagaatagga tcctgaagtt gagtccgcca gagcattggg
      241 cttacatgat tcaattaacc tttaaggtag ctctggaagt tggtactcta ggagatcctt
      301 ttgttaattg gcagcctgac acagacaatt aagtttgatc agatgaagag ggcatcaggg
      361 acatcattag catactgtac tgaagactac gtggtgtgta aaagttgttt aatttatgcc
      421 aaggaagaaa gcggggggct gggggagccc tccttgtgca tacagcattt tgcttattaa
      481 atatttcatt tcccttgcca taagccgcaa atgttcccat tttttacccc tccggtttct
      541 tctcactgca gtgaaagcca ctgagtggtc gttcctctct ttggcatttc acttgaggta
      601 ttgcatgaaa ataaaaacct gaaacaacaa cagagagaac agcagagagg tttacatc
//
LOCUS       KCKM01003194             934 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50140apa ultra-conserved element locus
            uce-4631, sequence.
ACCESSION   KCKM01003194
VERSION     KCKM01003194.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 934)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 934)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..934
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50140apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>934
                     /note="ultra-conserved element locus uce-4631"
BASE COUNT          270 a          193 c          193 g          278 t
ORIGIN      
        1 cgctaacctt atccctggtg tgttataaag ttgagccttg attcacaagc agtttcacag
       61 ccctgagggg cagagaccag caccgatgtg tggagtcgtc ccttactgtt gctgagtgtg
      121 caataaggat caggcctaaa tctttttaaa ggtaaatagt ggataaatgt gaagcctgga
      181 gctgtcattt aagtcttttc atctctagaa tagtcatcta ttccagaaac aggactcggg
      241 gtagagtttg aaatcgttcc cgtgtagccg tcaatctgtt tcgctatttt acagcaagta
      301 aattttcttc tcagtgggtg aactgcatga caatccatag gcaaacttct gaaaaactgc
      361 aaacacttac actttactgc aaatgtaacc ataacaattc aaagtactaa ttttctacct
      421 catataatat gtgtaagtat cccttagcaa cactcacggg aaacataatt taacagtgcc
      481 tctatcttcc ttacctcgag acgggaaatt tctgtcacat actaaacaga aggcaggctg
      541 tctgagcttc ccatgtgctt atctgtatga gtttttcagg aacatcttga aggggtgttt
      601 gtttttcttt aacccttcgc aagctatgag gaagcctaac tcagctaatg aaaatatgga
      661 atcttggctt ccaatccctc ccttggttaa aaagaaagag ggaaatgaaa aatgtgagct
      721 gagcatttca caggagaaga tctggaaatg aggtctttgt caatgggaga gacatagttg
      781 tctgctgcgc agtttatccc acgtcagtga ccactcagca caccatgaag tgttggcagc
      841 tccacgttct agcttttgta ttattcatgt tcgcattgta cataatgcca ggttcatgca
      901 tacaagaaca taaagactct aagaagcttt tgtt
//
LOCUS       KCKM01003195             575 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50155apa ultra-conserved element locus
            uce-1298, sequence.
ACCESSION   KCKM01003195
VERSION     KCKM01003195.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 575)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 575)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50155apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>575
                     /note="ultra-conserved element locus uce-1298"
BASE COUNT          221 a           87 c           86 g          181 t
ORIGIN      
        1 gtaatacctt tgttgtattt ttatgctgtg tattacaaca tcaaattata tttggatggc
       61 gcagtaatgg agcaaggaca gaaaactgct ccaatattaa gctctttgct agatttaaac
      121 atttaaatgc aagtaacttc ttccattcat gagaaaacac agcattaaaa aattaactat
      181 aagctgttag atgctttaca cagccccctt ataagaaagg cagttttaaa aaaagaactg
      241 tagtactgtt ttcagcaatt tctttatctc tgttcttcta agtaagaaag cttattaaca
      301 agctttgaac ttaaaatcac atttacaata atgtgccatc aacagtttta taagctaatt
      361 agaaaaaaag attaattaat gactggctgc taataaaatg gcaatcatga agaaagaaac
      421 caagggtgct aagcttcaac taccaccaat taagagctaa ttacaaacaa attatatatg
      481 tgttttgctg tgggctttaa tttactaaaa tggttttaat taaaagagaa aacatgctga
      541 ttaattgaac tgcagaaaaa atctacagta taaac
//
LOCUS       KCKM01003196             577 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50171apa ultra-conserved element locus
            uce-5443, sequence.
ACCESSION   KCKM01003196
VERSION     KCKM01003196.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 577)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 577)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50171apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>577
                     /note="ultra-conserved element locus uce-5443"
BASE COUNT          175 a          126 c          130 g          146 t
ORIGIN      
        1 aagcaaatat aaatttagat tcctgttgct gctggaaagg ggtaactggc tgctgggagc
       61 gctggccgtg gcggcaggct gcctcagcag agggtgctgt cttctcacac tagcgccggc
      121 tgaacgagaa ggtcactcag cctattgata aatcactgtg ccgtgattcc taactgacag
      181 ctcaaactaa catcaagctg gatgagagag aacaaaaggc catcaagcag ccattttctt
      241 gacactttta ttcaatcacc agcagattgc ttacgacagc aatagcagct gttttgtctt
      301 catctttcca catttgataa aaggtgtcaa ctcaaatttt tgtaaataat tcacttaccc
      361 ctactgcaca caccagcact gctcagcata tgtattctgt gcgagcagat cacggaggca
      421 ggtcagggct caatgatatc agctgaaggt catctgtgat ctaaacggaa gcactgataa
      481 agctacagtc cctcaaggtc aaagataaga actacactga gatatttgta atgtggacaa
      541 aaggttaaac aatagagaga aaagtatggc attgttt
//
LOCUS       KCKM01003197             741 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50186apa ultra-conserved element locus
            uce-6371, sequence.
ACCESSION   KCKM01003197
VERSION     KCKM01003197.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 741)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 741)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..741
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50186apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>741
                     /note="ultra-conserved element locus uce-6371"
BASE COUNT          217 a          209 c          158 g          157 t
ORIGIN      
        1 gttaaggagt ggattttgca agataggcaa caccgcacga tataatactg tgggctcagc
       61 atcccagagg aggggaatac gtggagaagt aacaccaggg aaaccatcat gggccaaatt
      121 tcccttcaaa agcaacgctg gcgtaaatcc cagcgaagcc ccagagtcgc ttcaccactg
      181 agaaagaacc ccaaagcgaa tccttctccc ggctgcgatc agatggcaaa accggagttt
      241 ccatcaccta caacgaaagg gttaagccga gatttcagtc cccctggttc aaaccgccca
      301 gcgagcactc cctgcccaaa ttacagcagc acacacatcc aacagatgcc gttcagacag
      361 gggctttcct tgccctgagg tacagttcag tttgtccatt ctactgtgca attacagaat
      421 caataaaaca tccctttgaa actccctgga ctagtgccga cacgccgaca gtagtcgagc
      481 tgacattttt tgctgtttcc gttattacta ccgtcaagcc ttctgagaag caagacatca
      541 aaacccgggc gccgcaaagc aaaggaggaa aagcaaatgt agattttgtt cgtcgtatca
      601 catcgctccc tgggcgatca cacggtaccc agtcatacct gcaaacaaaa tctgctcaaa
      661 gtcatcaaaa taggcattgg gaaacagcgt gtttccgaaa agcacaagtg ccccaccctc
      721 ctctgcttaa tatccctttc t
//
LOCUS       KCKM01003198             620 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50201apa ultra-conserved element locus
            uce-1689, sequence.
ACCESSION   KCKM01003198
VERSION     KCKM01003198.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 620)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 620)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..620
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50201apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>620
                     /note="ultra-conserved element locus uce-1689"
BASE COUNT          209 a          110 c          115 g          186 t
ORIGIN      
        1 tgattacttc gccgaagccg tactttctat tctctcttcc aaaagagaca aagggaataa
       61 atacttaaaa cccagtggtg acgacagtga agcaatcatg cagtcgctgg atacctttgt
      121 ttctaggagg catgtagtca tttttacatg tctgccactg ggtgtcaaac ctttcttttc
      181 ttcccctttc cattttggat ggccaaactg attatctaaa atagaaaatt agcacacaat
      241 ggctttactc tgtgataccc cttatgcaac taatgggcaa agcttgttaa ttggttgtaa
      301 atgccagcag gttgccaaga taatacttca gaaataagcg ggtattctga taattacagc
      361 aatcttcatc tataaaagct taagtagatg aagtactggc tggcttaaaa ccaagattta
      421 tcccgctgca ctcgcattaa aagaaaaaat aagatgaaaa caataatgta gcaaaacaat
      481 tatatagcag gaagcgttgt aggttttaga gattgtgaaa actcagaaag taaaacagtg
      541 ctgtaataac cagttatgga aaaataggcc atttacattt gtgtataatt aaatagtagg
      601 ctatgcaatt tcacttttta
//
LOCUS       KCKM01003199             368 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50217apa ultra-conserved element locus
            uce-6080, sequence.
ACCESSION   KCKM01003199
VERSION     KCKM01003199.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 368)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 368)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50217apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>368
                     /note="ultra-conserved element locus uce-6080"
BASE COUNT          101 a           85 c           74 g          108 t
ORIGIN      
        1 taggaataat gcacagtcct ctcctgtata gaatttaaat ctgctatcta tgggtaggta
       61 tagtcaaata tattgatagt ctccctcgtg ggttctgccg acactcgggt ttaattgtcg
      121 tgaactttga attcctatct taaggtcagt tattaactat tgatggattc tctttttctc
      181 catttaatgc taaagtattc atactaacca agatagatgg gaacgctgaa gaaatttttc
      241 aaagccaacg ccgcgcaaga taccctcacg ctcttcccgt gtgacaaacg gggagccctt
      301 tcctaagggt ggtgatcact cacgttcagc ttgaaaagga aaacacaaca ccgcgctgct
      361 gaccccgc
//
LOCUS       KCKM01003200             999 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50232apa ultra-conserved element locus
            uce-2441, sequence.
ACCESSION   KCKM01003200
VERSION     KCKM01003200.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 999)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 999)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..999
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50232apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>999
                     /note="ultra-conserved element locus uce-2441"
BASE COUNT          287 a          173 c          228 g          311 t
ORIGIN      
        1 agcagttaat tgcaatacta gctatagttt tcaaaagcag ttatcagcac cttttcagtg
       61 ttctcagccg tatccttaaa cttgaaatat ttgtttggaa attatttttt tccttaactt
      121 ctgcttgcct gtgttctctg ataattcagt gaattatggg agttttaaaa aggattaatc
      181 ccggaacata atagaagtta aaaaacccat aagctagtgt tatagctgga tttttttggt
      241 tagcagctga ccttctattg ctagaaaaag gaaactcttg gctagatgac cgttcaataa
      301 atgaacaggt tatatattga tttttctccc tcttcccttg ttatgtaata tgatttccct
      361 tcccttgcaa gggttgctgt tgtacagaat ggggctggga tcatggttgt gggagcgtat
      421 gggaatgtgt agactaagga aggctgtcac agcagtcaat aagatctgag aggtgttgac
      481 taattgcctg ctaattacac agtaaattgt ctaattaagc tgatggttaa ttagggtacg
      541 ctcgcacagc agtcttgtgg aatttttgtc tgatgtctgg gaagcagctt gtgtaattgg
      601 caaactggta aggactggca gagaacacga ctgggaagca cgctgccagt agatgacaga
      661 ataaggatgc gtttgcacaa aggttgtcat gtgaacactg aggggtttgt tagccttctc
      721 cagctacgtg gcagcgggcg caaccagaaa tttagctgaa agctgctgga agctgcaaat
      781 aaaataaggt ttaaacgtgt agtaccagaa aagcagtgat gtgctcttct tgcattttag
      841 acagaattcg gacttcagat aaacacagag tatcacaatt ctcacgtgat tactgtattg
      901 tgatctgctt agtggagtca caaaatcata ctgtttccca ggatactctg tacatcaatg
      961 ttgaaaatgt ataactgtta ataagaatgc tcgcctgcc
//
LOCUS       KCKM01003201             848 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50248apa ultra-conserved element locus
            uce-7819, sequence.
ACCESSION   KCKM01003201
VERSION     KCKM01003201.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 848)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 848)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..848
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50248apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>848
                     /note="ultra-conserved element locus uce-7819"
BASE COUNT          241 a          169 c          181 g          257 t
ORIGIN      
        1 aagtctgagc acctgagatt ctaaaagccc tgcatttgag aaggaccctt agcaagtatt
       61 tatttaccac ataaaattgg taaaaggctg ctttttcctc cccctccccc tcactctgtg
      121 gcatacattg tgtatcaatt ggttattctt cttacctttt cattttccct catattttat
      181 tggggggtga tgaaggaggg ggagttgttg ctattgttgt aaggaagatt ctggaatatg
      241 tgaacacaaa gtaacagtat tttaaataat gaggaaaaat tccacatgga aagctcatct
      301 ggctgtggca gtttgtgact gaatgagaga aaagtgccct agaagctatt cattaggaat
      361 tcactggaag ctctcaaaca agcctggcag aagctgaaat tgaagtggtc tctgacctaa
      421 ttttcttctg catgaaacat ctgcatcaag gcactctttg atgtattcca cttggctctg
      481 tctacagtat tgtatcacat ggcttcagcg ttgcctcagt tttaaaagac atttccagcc
      541 tgtagaaggt aatgtgatgt tactgttacc caaactaatc attcaatatg ctcccgaaat
      601 agaaacaata gaggttcaga cagcgatgtc tgctttgcag tcattgttgc tgcctaagct
      661 cacggtttaa aaaacccaga cctgtgatat tcatctcatg taattcatca acaccaggaa
      721 ggggagggag aggggggaac tgtgagcctt ctgtgtaata gtatgtcaga ggacacaatg
      781 ctttacatgt gtgagctttg cattctttgc cactccagcc atacagttag tttagcacat
      841 tgaaaaca
//
LOCUS       KCKM01003202             529 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50264apa ultra-conserved element locus
            uce-1263, sequence.
ACCESSION   KCKM01003202
VERSION     KCKM01003202.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 529)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 529)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50264apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>529
                     /note="ultra-conserved element locus uce-1263"
BASE COUNT          163 a          127 c          117 g          122 t
ORIGIN      
        1 aatgttgagc cctttcttca ggttgtaact taaagggaag aaaataatga tgtctcataa
       61 tgacagctgt aagagggatc tgtgagaatc aaaaagcttt cgaaaagccg gtgtacaaaa
      121 cacttgaccc agttgccatt actactgccc ggcccggcca ctacttcata caccaggaac
      181 ctactcctgt gctggctgat gcagaggcac cgtgggacag gcggtgagag acagagcagg
      241 gcagctgcaa atgaaaatca ccctggggag ggttacaact agataaagtt ttcaacaata
      301 agattccaga gactgctgac tggagaaaag ctcaatattt tagtctcagt acaaatttgc
      361 ttcaatctta tacaactccc atgcagcagc atccacagct gcatgctgta aacaacaaac
      421 aaatctattt ccatcagccc tgctgatgct atgagaaaag tgcctgagca taagacatgc
      481 acagatgtag agtctcacct gagcctagtg ctgccctcca tttggcccc
//
LOCUS       KCKM01003203             631 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50280apa ultra-conserved element locus
            uce-1631, sequence.
ACCESSION   KCKM01003203
VERSION     KCKM01003203.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 631)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 631)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50280apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>631
                     /note="ultra-conserved element locus uce-1631"
BASE COUNT          184 a          105 c          112 g          230 t
ORIGIN      
        1 agctctgaag aaaagtggtg ttttactacc aaatgatctc cttgaaaaag tggattcaat
       61 taatgaaaaa tgggaactgc ttggggtatt tgcattttta ttactgtttg tgggttatgt
      121 gtacattttt gtgtgttgaa gtacgctatc tgtctgattt ctaatttgag gcacaaatat
      181 ctctctcttt caattcacca cgtacatttc aaacaagcta ctcatgctat tataaaaact
      241 ccatagtatt ttcctcttct gttgattttt tttttattcc atgcttgtct cctgtctgac
      301 tttaataatt ttagttcttt aatacataaa aaatgtaagt aaaatatgcc atgtattacg
      361 ggtatgcacc aagtcaacta taatgcagta tatctgatat acactgactg tcatgcttga
      421 gtgaatgtta atagaattta ttctgaaggt acatgttaga gacgtctact gtttaactat
      481 ttactatacc cttaagatga aaagtggggt tgtcactgca tatctcaggt cacaccgatg
      541 gctcaaatac acatatgcag atttggtacg gatctgaata cctggagcta aggatatagc
      601 caggatatgt ttcatgctgc tgtattcaac t
//
LOCUS       KCKM01003204            1137 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50296apa ultra-conserved element locus
            uce-5019, sequence.
ACCESSION   KCKM01003204
VERSION     KCKM01003204.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1137)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1137)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1137
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50296apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1137
                     /note="ultra-conserved element locus uce-5019"
BASE COUNT          293 a          200 c          234 g          410 t
ORIGIN      
        1 tgtttgtaaa atttgctttg agtcccttct tgcatttttt ttaatcgtac tgtaataata
       61 atttaaaagg tgatacatac agtgtaaact gcatcaatgg cattttgctt tcattatccc
      121 tcatagatgt ttagcaaaac agtgcctggt gttttaaatt acttctgctt tactttaaaa
      181 cgggaactta tgtttgaata gcctattgtt ctgttagcta ctacaatgca attcaaaccg
      241 cacggtgtta ttatattcgc tgtgttttgg gatcatataa aatatttgtt tccccccctg
      301 ctcccaacct ataaacttcc tatctcgata aggagtttct aacccttgga aatactgctt
      361 tacaaattca gctaatgacc caaatacagc ttgtttgttg tgtatgagtt gtattaaaat
      421 aacgtactgt atgtgtattg tcattaatga tatgctcatt ttgataatgg agctgcagtc
      481 tcttagtatg tagtccttgg ggagatgctg cattttttta actaagtatt gttctggctc
      541 ctttccttga ttggcccaga aatagcaatc agctggggag caggatgaca tgcctcttag
      601 cgatcccttt tatctttgag atgagtatca acattgtatg cttcctaatg gaagtgtaat
      661 ttaatgaaat ctattgggta aacatacttc agatgttcaa aggaggtgac aaaatttttg
      721 ctggcagcca ggacctggct ggtttccagc ttgcctttag ctgctatgca tatagcattg
      781 agagaggcac ttaaaatagg aacacaaagt attgtttcta ttgtgttttg ggttgtggat
      841 tttttttccc cctctgtttt attttcctga attttgtttt tgtcgtgttt gtactaatgc
      901 cctctgactc ctaggttttc ctagtaaaat gccacatgag gtcaggtttc cccactcccc
      961 ctctagataa cggtgttaaa ctcaggggag ttcactggca cagaccatgg tgtatgttgg
     1021 ggaaagggta tgtagggggt gagtaatcaa ggctgctatt tgttaggcag tagctctgtg
     1081 aaagggtaag ttgctctgta gactgataaa attaaacatc ctgttttaaa gatagtg
//
LOCUS       KCKM01003205             900 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50312apa ultra-conserved element locus
            uce-2773, sequence.
ACCESSION   KCKM01003205
VERSION     KCKM01003205.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 900)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 900)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..900
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50312apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>900
                     /note="ultra-conserved element locus uce-2773"
BASE COUNT          254 a          130 c          195 g          321 t
ORIGIN      
        1 tttatactag aatagcgttt tttcaccgat tacatgagtt gcatgctagt gaaggcactt
       61 tgggttatat tgttggtcaa gtgtatggtg tggatttgaa tgcttttcag ttgtcttttt
      121 gagcagctat atctgattcc gtagcgaggg ttcctaagaa tatgattaac cctatgggtc
      181 atcttataat gtaattatta atgattgatt tcatggataa acagaatcaa tacgagaagc
      241 aaaatggttt ggcatatatt tggggttgat ttctaacatt cagtaaacat gatcttgtga
      301 caagactggt attggtttat tactcggaac atgtttgatg aatctgaagt gtgtaattag
      361 ttttatataa tgatggtgat atgtggtggt ttttacgtga cttatgttaa tatggccaat
      421 agtgttaaca tctcctgcca ctaatagtta gggtggggat gtatagtaat tgatcttcct
      481 gggagtgctg taatgtaaaa acaattcagg ctgtttgaag tatattttac aagtgtgcat
      541 tggaccttgg ggatgttata ctgaaaaacc caattgtaca gttaccatgg gaacccaatt
      601 agaatagatt gcttgagcac tctttcatct tgaccaaaaa tctaatgtac tttaaatgtt
      661 ttcgtatgga attttattca tatactgact tgatataata gctggtctta aattttcgtg
      721 ctgaaatcag ggagcattat gttgtgcaga tcctgaggac ttgtctttca aggagaatct
      781 tcctttagcg tttaaaagtt gatgaactga gaaaaatact ttttatgaat ctaggacttc
      841 ccactgtagc attgccctca cgtggccctt tcactgcagt cctgtgacag taagcaggaa
//
LOCUS       KCKM01003206             306 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50327apa ultra-conserved element locus
            uce-4602, sequence.
ACCESSION   KCKM01003206
VERSION     KCKM01003206.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 306)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 306)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50327apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>306
                     /note="ultra-conserved element locus uce-4602"
BASE COUNT           83 a           70 c           73 g           80 t
ORIGIN      
        1 ttccattgag cttatgaacc cccatacaga agacttacct ttcactagta tgattaagaa
       61 aaggccaatg tagctttcct gctcgctgga gcgtgaagcg tgtttaattt aataatgctg
      121 ataaatctta aagccaggag catttggcta acacatgacc cactttttca atcaattgga
      181 aacatttaca taacggcctg atgcagggtt cctcctgtga gggatgtgga gcaggggagc
      241 cccaccacaa gcgctgcccc tgtggggcat gtggtgaaag caaaacggcg aatttggctg
      301 cccttt
//
LOCUS       KCKM01003207            1068 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50343apa ultra-conserved element locus
            uce-3262, sequence.
ACCESSION   KCKM01003207
VERSION     KCKM01003207.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1068)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1068)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50343apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1068
                     /note="ultra-conserved element locus uce-3262"
BASE COUNT          349 a          242 c          184 g          293 t
ORIGIN      
        1 ttgcccttcc ccaaaagcag cacctcttag tgttttatag aaaacaacca cagccagcag
       61 aaatcaaaca cttccaagca atgtgaagta ttacattgga ctgcgtaaac aaggaataaa
      121 acatttttac acttctcctt aaacttattt gctttttgaa aatatttatg cagcatagaa
      181 gacgcagggt tattgagaaa cacagccagt tcctcttctt taattgaaac atttatgctt
      241 tttgttctgc tagcaaaaag caatgagcag taataatgca agataaatac acaagaaact
      301 tatagatacg attgtaaaac aacatcatcc taatgttttc atttaattac cctgaaatgt
      361 attctattta atattcatta ctcaaaagcc aatttaaaag agaaagaggt gaagggactt
      421 attcagaaag acggactgtc attcactgca atagttatct aatatacaga agttaataaa
      481 gcagattaat ctacaagtcc ctttaagcca tcactgagtt tagaacaact gcctctttga
      541 cctctaaccc tcccgctgtg caccagtagc aggtgccagc tgcacgaaaa ttacggccaa
      601 cgcgttttaa ggccgagtct tttcttactt tgcttctgac cagcagctga ccctgtagga
      661 acgattgttt catgtgctgg cctaaaggct acataaacca gtaaccgata aacaaacgca
      721 tacacagagc agctgcctcg cccgagggcg cgcagccacc accgacacct ccagcagcgt
      781 gtgctgccag ccgagccgcc gctttgtgtt tccacgcatg gattctgtac aatacttgtt
      841 acttcgcgga actaaacttc tccccgtccc cgaaactgtt tgtgtaaact agagcacagc
      901 ttggatgatt aagaggagat tcccaatttg atttagcacc attattaaga gtgtgaaatc
      961 ttcagataca tcactaatga tgatgtattt taacattaaa agtcttacaa ttaaattact
     1021 cgattcacat gacaacgaat cacaacaagg ctttcaacaa agcagaat
//
LOCUS       KCKM01003208             956 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50359apa ultra-conserved element locus
            uce-6557, sequence.
ACCESSION   KCKM01003208
VERSION     KCKM01003208.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 956)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 956)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..956
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50359apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>956
                     /note="ultra-conserved element locus uce-6557"
BASE COUNT          311 a          228 c          179 g          238 t
ORIGIN      
        1 atcagatgtc aaattctgtc ttcaaaacag cacactgttc acaatcagac cgttcaacac
       61 caacggccac aagtccttcg ggaggggaac tcggttccac agagccagag aaacatctgc
      121 aaggtgggat atgttggtgg agatgggaca gatcgaccag agcagatgac aaacaccatg
      181 ctcaagaagc accctccaaa ctccttctac caatgcgaag ctacatcagc aatcagagaa
      241 accaagacat ccataaactt ctcagtgcct ccccatgcac aagttaaatg tttgggaaag
      301 gcaactggtg gattagcagt gctggttaca aatatctgac ctggttacac tcatctcaag
      361 cccattggga gcctacgtca acactggaca ttttagcgct ctgacctgtt gctacagatc
      421 tcttccatgc gcagaaatca atcacttgga aaactgatgt agccctgtta cactaattaa
      481 actttgtttt gcatcagagt cctgcatttg cagtgtgtgt acagtatgta aattatacaa
      541 attacaagaa aagttgatta gcgtaattca aatctcagcg cagttactaa aattaacaat
      601 gaatacaaat tatacagaat cacttcagtg cagctgagaa gctctacaca caaagcatgt
      661 taccaaattc acagaatcgg acaccaacac aagcaaaaca agcagtgaga atactacagg
      721 tgacctttct cagggaaatt ttgccccaaa aaggtaaccc tcagccaact ttattaacgc
      781 tatgcagcta ttattcaagg ttaaacattt cagtggtgtc tgcaatgctg tttccagctg
      841 ggacagccca acccctccca ttcacaacat tttcttacca tctcttctca ctccaggtga
      901 agaaagatga aaactctata atcagagaat taagtttgag atttgaggtt tgtcca
//
LOCUS       KCKM01003209             247 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50375apa ultra-conserved element locus
            uce-3194, sequence.
ACCESSION   KCKM01003209
VERSION     KCKM01003209.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 247)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 247)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50375apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>247
                     /note="ultra-conserved element locus uce-3194"
BASE COUNT           70 a           39 c           44 g           94 t
ORIGIN      
        1 agctctctga attttttaaa agttataaca tttgattggg ggcagttaat cagtgttaac
       61 cctgagtagc tcttgggctt tatggattca agcattatat gaggttgcac tgttccagca
      121 aaaggtcaag tattaatgga aaatgttcac agctctttta ctcaaagaaa acatgttact
      181 tgtaagtttt cttttgattt tacttttaca gttgcattga atgtcttcat tcatttagcc
      241 atccata
//
LOCUS       KCKM01003210             774 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50389apa ultra-conserved element locus
            uce-5494, sequence.
ACCESSION   KCKM01003210
VERSION     KCKM01003210.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 774)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 774)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..774
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50389apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>774
                     /note="ultra-conserved element locus uce-5494"
BASE COUNT          243 a          175 c          162 g          194 t
ORIGIN      
        1 ccggcagatg cttcccctcc ttcatcatct ccttcccctc cctaaaacaa actacctatt
       61 taactcgaga tgactaacta accgtctccc cacccaatta tcaaagccct gtcttctgtc
      121 gtatcggtga catgacacag atattgtcaa gaaaaagtaa actggggctg gcactcgaag
      181 gcagctcgtg agagatgagc agtggaacag ccatattcaa taaaaaagag gaacaggatt
      241 ccttcagaaa atgtattgct gttgtggcaa cgtgctgctg ccgctgaagg gactgatttg
      301 ttatttagca tgtagtcttg gactgtctgt cattctgggt gctaatgctc cgctaaaata
      361 actcattggg agctgtcagt gggatgttta cataggcccc caatcttttc ttcatacaag
      421 gaaatttttt actggaattc atcttctttt gatctcacat tcaaagcaac agcagcttga
      481 tagacatgca agtctgaaag caaatccaga cgctgaagat aaaccgccag agtatgacag
      541 gcaggagcat ctaaagctta taaaaatgaa gagaacagca tgtcgtctga gtattacaat
      601 agcagaaatc aagagacata ttaggtggaa ctgatcagcc acaaaaacag ttcaaaaggc
      661 agatcataga aacagaagac taagctaggg aaaaaattgg aaagatctgc tttacagagg
      721 catcacctcc tttctgagca ccgcggcatt tccgctccgg catgtaaact tcag
//
LOCUS       KCKM01003211             792 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50405apa ultra-conserved element locus
            uce-4917, sequence.
ACCESSION   KCKM01003211
VERSION     KCKM01003211.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 792)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 792)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..792
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50405apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>792
                     /note="ultra-conserved element locus uce-4917"
BASE COUNT          283 a          125 c          128 g          256 t
ORIGIN      
        1 atttcaactg aatgaaacat aagtaagaaa aactgcacta tgtctcaaat tattttatgc
       61 tacatttctg tttccctaaa ctgtatgtca gagatcacaa aactgaggac caatcttttt
      121 ggaaaatgac attttacaca cagcttctgg tgatgatcat attttcaatg tgaaagttct
      181 aaatgtttgg ttttatgagg aagtacaaca tgttacaact atatttcttt ttaattccaa
      241 ggtgaatgtt taaaaaaatc ttgaaaaaga gacaagtgtg tatgcccttc aaagtaatta
      301 gcaagtttca cagtgattgg tacaaaacaa ttattgtcat tgatcagcac tgaacagata
      361 attttaaaca aagtcattgt gtgctcagca gattaccgct tgttaacggg caagttctaa
      421 atgacctctt aagctagtca aatcaatgat gcatattcct cattaagtaa catcaaaatg
      481 taagtggtct tataaataat gtttatttta agcactaaaa caaatggcaa aaccttgata
      541 tatcaaaagc catctgctca tggaaatatt tttccttcca caggattact tttgttgctg
      601 aaaatttata gcaaccttaa atctgttaag ggagcaaatc atattctgac ctagtactca
      661 aaactgaaat tgattaaaac aagttttctg atttagttta aaaaggtgaa actgatagtt
      721 ctggttataa ctaaatgcag tccagggaaa cagagatgta gactgacttc gaaacatgag
      781 catatgtatg cc
//
LOCUS       KCKM01003212             795 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50419apa ultra-conserved element locus
            uce-3492, sequence.
ACCESSION   KCKM01003212
VERSION     KCKM01003212.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 795)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 795)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..795
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50419apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>795
                     /note="ultra-conserved element locus uce-3492"
BASE COUNT          266 a          121 c          153 g          255 t
ORIGIN      
        1 aagcacactg tatttaacca aaagcaggat gttgcataaa aataatctca ggattcatga
       61 gatgttgtaa cggggagaag cgtcttccta ttctgcttca gataacaaca ctgctagttc
      121 ccacataagt caagctacac ttgttattat tagaagaaag gaatgagttg ttttacatac
      181 aatgttttac tgcttgcaaa attactcatg ctctcagaat aaactacaga gtgcaaatgc
      241 cagggtgatt tttttttctc ctgttgtgga agacataggg tagattggtt aaggtagaga
      301 aacaaatgta gttggtttga tttatcactt gtgacattag catgtactat cctgttctcc
      361 tggaaacaaa atggttgcac ctgaggacag tgatataaac actactttga ttatttgaaa
      421 caaaccatta ggctttgatg aaagaaccat tactttagta gaccttgtac agagagcgcg
      481 cttggagata atggatgagc agcctacaga ttgcttgctt agaatttcaa gaagtcacat
      541 gtttgtttga acttcatggc ataaacagat atctaacatg aacaagacaa gctaatggtg
      601 tacttagaat gtagttgaaa aacactcttg caaactttac ttgcaatact ttaaatgctg
      661 cattttagag tgtgcactga aaaaatcaag gagctttgta actgtaaggt atacaatagt
      721 tttatatatt gatgtgtgta caatacattt gtatatttaa aacaataagt ttgatttcgt
      781 ttttcataat gaaaa
//
LOCUS       KCKM01003213             881 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50435apa ultra-conserved element locus
            uce-5346, sequence.
ACCESSION   KCKM01003213
VERSION     KCKM01003213.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 881)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 881)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..881
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50435apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>881
                     /note="ultra-conserved element locus uce-5346"
BASE COUNT          181 a          224 c          269 g          207 t
ORIGIN      
        1 cagatactga aactgatggg gcagcagcta gtgttcaggg cagccggagc agtagcatgc
       61 tcctgcagag gtgagagagg tgtgggatga atgtgcctcc tgaaccccct ctggctccca
      121 gccttgatgt tcatcgtggg taacctgctg ccggctagga cccagcagct cccagggagg
      181 cctctgaggt caccgagccc tgttgtgctc ccgagccacc tgcacccctc tgcttagggc
      241 acatctgaag tgggcacaac tctcctcatc ctggagctta atgctccttc tcctggtttg
      301 gtggcacacg aggtaccacg gtggtcctgg ctctgtgcct tcccataaat cccggctgga
      361 ggccggtgat ctcggctcag cccattcgcc cctctgagga gtagagatta taatggtgtg
      421 tcgtatattt tttaatttcc taaaggtaac tgttcagtcc ccacctaatt ttacacagca
      481 tgtgagggag cagagcctgg tgacggatca gctcagccgg cggctcgtcc gtacctacca
      541 gctgtacagc cggaccagtg ggaaacatgt gcagatcttg gacaacaaga aaatcaatgc
      601 gatggcagag gatggggatg tgcacggtaa ggacgcgcga tgggggcggg tggtggagcc
      661 agggaggtgt ttgcagccca gcacagcgat tgatgatttc cgtcctgttt gttagccaga
      721 aatcattaaa atcgttcagc ttgcgggagc ttgtaaaggg agaacatagg ggtcagcgat
      781 cggcggctgc gtaattcaag gtgagggcag gttccccgtg ctgagggtgg ggaccggtgc
      841 ttgcaggatg ggctctacgc ctttcttttt cattcttaat t
//
LOCUS       KCKM01003214             407 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50451apa ultra-conserved element locus
            uce-309, sequence.
ACCESSION   KCKM01003214
VERSION     KCKM01003214.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 407)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 407)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50451apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>407
                     /note="ultra-conserved element locus uce-309"
BASE COUNT          137 a           77 c           70 g          123 t
ORIGIN      
        1 ttaaaagtca ccttcagaaa acaccggtcc accttgcttg taatcaaatg gcacctcata
       61 accacctaac catttttaat atcccctgga ctcttactgt attatgccaa ggctcagaca
      121 ctgtctagct agtcaaggaa aagagtatac catcgtattt aaaagcagtt attgggacag
      181 gttttacagg cagtgggcta agacaattca gaaacaattg cttatgtgat agtttgagga
      241 tttgtcgctg tcaaacagtt aatattgctt taatacatga agtaggctgt ataagacagc
      301 aataatgaaa aatgtcagga aagacaatat caattgttat tcaacatcca catcaaagat
      361 tacttttttg tcagtagctt tcagaaaatg tattttccat cagatct
//
LOCUS       KCKM01003215             458 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50466apa ultra-conserved element locus
            uce-6353, sequence.
ACCESSION   KCKM01003215
VERSION     KCKM01003215.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 458)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 458)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50466apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>458
                     /note="ultra-conserved element locus uce-6353"
BASE COUNT          125 a           84 c          119 g          130 t
ORIGIN      
        1 ggggcaagaa gagctggggg aggggggagg catgcatata aatcattatt ggcgaacatc
       61 tcagctcttg agccaggctg tcgcttgccg ctgctcgtgg tgcagcccag acataaatca
      121 taattcccct acaatagatc cttttgcagc cgccatcagg aaaagtgtgt tggttttatc
      181 gattttttga caccggggcc ctggcaacgg ccgctctgaa tcattatgaa atgaaactga
      241 ttaggaattc atggaatact aaataaactt tacgagcccg ttgtaagttt tttgatgcat
      301 ggggagcgga aaatgaaaac taatgatata aaaattacac agcgtgctga gtattattat
      361 actgctattg atttgtttca aactgtacat caaaatcgaa gtgtgctggg tgtgcttggc
      421 tgcaaggctg atgctcagaa gcttttgagg gggttttt
//
LOCUS       KCKM01003216             628 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50481apa ultra-conserved element locus
            uce-2937, sequence.
ACCESSION   KCKM01003216
VERSION     KCKM01003216.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 628)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 628)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50481apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>628
                     /note="ultra-conserved element locus uce-2937"
BASE COUNT          203 a          133 c          104 g          188 t
ORIGIN      
        1 tcatcactgc tcttcttcct tctaagtgaa gactaatgta aagacaatcg ctaaagaagc
       61 agcaatcata ataccctata ctaactaaat tcagacttag ggctacccac aggagaaata
      121 catgacagat ccattgttcc gtattagcag gatattgtcc cagtatatga acacatgcaa
      181 actttgaagg ctttgaatat ttaaggcagg acactagtgg ctcatcccag tgggaaccac
      241 agaaaagggg aacctgatta aatttaatgt cattgtcact ttttttttcc attgctaaga
      301 attatatagg tagccatagc taccacactg ttcagacacc atgaccacaa tattctccct
      361 cagaggttgg cgtcaagggc tgaattattc actccaagaa tgtgattcat tactagatgt
      421 gattcttgca gattaaaaga tttgtcagta tataaaatgc atgtacatat tctagcagcc
      481 tattttaaag tcattgttat gccctcacta accttaaaag acaccatttt ttatcagtaa
      541 aatttaagtt cagagcatat ctgcccctgc cccattcaga aagctctgaa gtaactgagc
      601 agctttttac tgtttactgt acaacaca
//
LOCUS       KCKM01003217             574 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50497apa ultra-conserved element locus
            uce-4070, sequence.
ACCESSION   KCKM01003217
VERSION     KCKM01003217.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 574)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 574)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..574
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50497apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>574
                     /note="ultra-conserved element locus uce-4070"
BASE COUNT          203 a          105 c           89 g          177 t
ORIGIN      
        1 gtaaaataat aataataaaa atcctaaaag atttgaagat atttttaaga gaatttaaat
       61 ataggactct tttcatctag ctatcactgc agtaatataa atgaagcaaa ttaattttaa
      121 tgctccaagg tactgattct gtgtcactgt cactgacagg atccaactag actttatgag
      181 atggcatttg actttatgga agtgagcact atgcacgcat ttacaatgtt acagggactt
      241 taagctgtca tgctgaaaaa tgtttataaa acattaatca aaaaatgcct ctttaataca
      301 atgcattgtc tgaaagatgt tagaaggcac atattgtaaa tggattcttt ttctgactaa
      361 agtaatttct accaaaagcc tttccccact gctatacaag tacacagtgt ggagagataa
      421 agagcacttt ctcagcacat tactacctga tccaaacact tgggaaatca ctaatgtaca
      481 gcatgccata tttccatgtc acacatgaca catttgtcta aaattaccca acagagtttg
      541 acattgcagc atattccata gctgagcttt caac
//
LOCUS       KCKM01003218             702 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50512apa ultra-conserved element locus
            uce-5918, sequence.
ACCESSION   KCKM01003218
VERSION     KCKM01003218.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 702)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 702)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50512apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>702
                     /note="ultra-conserved element locus uce-5918"
BASE COUNT          240 a          144 c          114 g          204 t
ORIGIN      
        1 gctgaattca aataagcaca aagttaaatt atattaagct ttcacgactg atctttcatc
       61 attttaaatg gtagctttta gtattttctg taaaatcagc ctgaaatact cccatcgttg
      121 actgtcatca agtagaccag ggtcactttg ggaaaatcca ttctcagtga tgtaaattat
      181 agggttatta tatgtatcta gaacaagaga gcagaagttt tattcagaac agatgtaaga
      241 aagcccataa aatcagatgc attaccctct atcttttcta cgctacaaac taaaactagt
      301 tttcatcaaa ttgcactgac cctattaact taattttcca tgagctgacc ttttataact
      361 aacaatggaa aagcaaaact gtgcaaatag ccatgaagac agtgaaatga cttattttaa
      421 tgagaagact aaaatatctt tcctgcatta gcatctgctt attgccactg gtccttaacc
      481 ccttggtact ggcagtcacc acacatccca ttgccaggag cagatgcatg ccaggaaagc
      541 cttgctgctg gcatcagaaa gatcatttct ggagttcaaa agacgatata acactggtgt
      601 gtcatttcaa actgcaaaat agctatcaag cacacaggca ctaggaaaac actaaggctt
      661 ctacccttta tagctatcat gcaaaaatta aactaagaat cc
//
LOCUS       KCKM01003219            1051 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50527apa ultra-conserved element locus
            uce-4068, sequence.
ACCESSION   KCKM01003219
VERSION     KCKM01003219.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1051)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1051)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1051
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50527apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1051
                     /note="ultra-conserved element locus uce-4068"
BASE COUNT          319 a          175 c          205 g          352 t
ORIGIN      
        1 tttttctgtg aatctcagag agactaagca tggaaattgc aaattacaca atttgagtct
       61 tctgtaattg ctttctttta aggtctcttt catagtgtta ggctgtgctt tctatcgagc
      121 ttaacataga catgtacttg tcaaaagaac ttttttaaat gtttgtttag gatgcaaatt
      181 catgcaataa ataagaatca ggagtaataa agagtaatga gtgtattctg acaacagccg
      241 agcattaaga tggtatgcca gaacctgcca gaatctacta ttgtagaaat tgttaattct
      301 gtcagtcctt ttgaatatag attttttcct gaactcgcca acaatacaat aaactggtaa
      361 atctaagttt gacctggttg ttattgttgt gagccttggg tatgtcaaag gcttttcaca
      421 aagtcaggat tattaatcaa acctgactcc cttttattga ttagacctca aatgtttggg
      481 ttacatgcca ccctgtttat atattgctgt ttaatttgca gccaccctgc gtgcactcta
      541 tctaagtgac aacgattttg aaatcctgcc gccagatatt gggaagctca caaagttgca
      601 gatagtaagt aatttatcta aattcttgga aaatcaattc acttttgcaa tgcttgtagg
      661 tatagaagct catcaatatg aggagtagta gggtatattt gcaggagtag accactacac
      721 ctggaactat ttcttcttta ccagcagaca cttgtaaata aattggaaga attatctagg
      781 agaaaggtgg gggcagaggg agtcaattgc tgttttagtc tactttgtgg taacaaaaaa
      841 attgttttaa ctactttata ttcactccta gttgagtctt agagacaatg acctgatatc
      901 actgcctaaa gaaattggtg agctcactca gcttaaggaa cttcatatcc agggaaatcg
      961 tcttactgtg ctgcctccag aactaggtaa gattatggat gatcatttaa ttatttgaat
     1021 aatgatgata atgatgcact gtgctgcgtt t
//
LOCUS       KCKM01003220             853 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50543apa ultra-conserved element locus
            uce-7832, sequence.
ACCESSION   KCKM01003220
VERSION     KCKM01003220.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 853)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 853)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..853
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50543apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>853
                     /note="ultra-conserved element locus uce-7832"
BASE COUNT          249 a          176 c          164 g          264 t
ORIGIN      
        1 tcatgtttca aaatctgaga gcaaaatttt caaacacacc ttgtacagat ccagggcttt
       61 cttcatctca ttgtattttt tgtatgctgt ccttattcag aaaagtttat atttgagttt
      121 tattctatgt gaaagaggga gggaaaaata tgaaactcca taggtttgtc tgcttaagat
      181 cactatttgc taagattttt aaaaaattaa caaatcacct gaacagagat ttaacttttt
      241 gataaacagc aaactcatct actgctgtgc tagctatttt taacccacct tgtgagtatg
      301 ccttttttat tgctttatac agcatatctg attctctcta aagcacaaac taaaaaatct
      361 atccggctgt catttgctgc atagtgccat ctatcatcat gcagcttggc agctgtagtg
      421 catgagagag aggggggagc tcaagcagga ggcacagtca aggactttca catgtaacac
      481 acaaaaaaaa tccttgtcac aattatttat ggctcttgct ggggcacata ataggacaca
      541 taaaacctct gtttcagttt caagcaccct cacatccacg ctcccttgtc gaagttggtc
      601 gcaggcagtt ttgctttaca catacaattt cctgaacaat gccgagcact tgtgaagtga
      661 cagtgacaaa tactagagat gctggctgca gctctgcagg ctgttacagg agcagtggtg
      721 tcaataatca aggaaggctg ccaatgatac caaaatgcca gtgtgatatt ctgcttgttc
      781 aaccagctat ctgcaacgct tttattttga agttgcagga aacttcttgt ttccctgtag
      841 ttccaggctg caa
//
LOCUS       KCKM01003221             951 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50559apa ultra-conserved element locus
            uce-333, sequence.
ACCESSION   KCKM01003221
VERSION     KCKM01003221.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 951)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 951)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..951
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50559apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>951
                     /note="ultra-conserved element locus uce-333"
BASE COUNT          283 a          171 c          164 g          333 t
ORIGIN      
        1 aacagtaata actctttctg atgagtgctt atgtacctcc ctgtcttcta ctgttaatcg
       61 gtctgtgcag tgtatttcaa acgtaggcat cataggattc tgtccttcac tggagtttta
      121 ggtatagttt aataaaagct aaaccttgtg aagttttaaa caggaaaata agttgactta
      181 cttgctaatc cttctggatg ttgcaaaagc agaattgcct cttactgatg cttttattaa
      241 ggaatgaaaa gttaagctgt gcattacaac tgtatttctg gaggagaaaa aaaaatccag
      301 caaattgata tataactctg cagaagtcta ccaattgctt tttaattggt attatagacc
      361 tcactctgaa gctaggatgt tctattctcc tatgtgtgaa tgtgctatga agtttttcta
      421 attgatttgc tttgcccatt ccatttgatg tatcattttt cacaatattt cataatttgt
      481 gctcatttct aatgaacaga gtcgttagga caggcatgtc taagtacaac tgacagctaa
      541 cattaggtgc cagatgcagt ttataaagct atgtagaact gcagagaaca gtttaaataa
      601 attagcacct gtacattagt ctcacttgct ggtaatttat aagcgaatca gtagagatga
      661 catttaggta agtcattgat caagttaaca gctgcatacc cactgcccag ctgggatacc
      721 taattaatag agattgcagt cctgacctag tgcttttccc cggttgagtc tgtaatcctt
      781 ttattttgtg atttaacttt aacttacggt tgtagtaaac agcccacctt cattttccgc
      841 tgtcatttct gtgatattct actttaaacc ccagaaatct aagtaagatt aatacaagaa
      901 acacatctta atcttcatga cctatttata tgtcagtatt tttattactc a
//
LOCUS       KCKM01003222             978 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50575apa ultra-conserved element locus
            uce-4146, sequence.
ACCESSION   KCKM01003222
VERSION     KCKM01003222.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 978)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 978)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..978
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50575apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>978
                     /note="ultra-conserved element locus uce-4146"
BASE COUNT          314 a          173 c          166 g          325 t
ORIGIN      
        1 tttatttcaa agtaaaccac ttgacattta attaaattca tatgtctctt tgcttaaaga
       61 ttatatatag aaggaaggaa caaaatgtca ttcttaggaa cttggtgtaa ggaaggatgt
      121 atctattacg cggtattttt aattagagat aatttttgtt ttcttaagca cgtaagttaa
      181 gtatgctaat cttaaatcaa caacagtttg cttcagaaaa caatgtctcc tgtgtttctt
      241 caaaccttcc tgcataattt aactcatatt ttcaggcttt atgtagtttc ttgggttctg
      301 tggcaaaagg attgcatcac ctgtgacact tggaaagaca tttgataggg aaagaaaagc
      361 atttgtactt atcagtggaa taatactctg tcagtaatgt gtaaggggta tcaccgctat
      421 gtcagctgtt ctccatgtaa attaaagctc tggcaaaagt gtctgaagca aactcttgaa
      481 aaccacaatg tcgatcatat taaaaacagc aggagaggag aattaagaaa gaaaagcatt
      541 tctaattctc tttcaaacat gctgatgttg ccaagctttt gtcataatgc agtgctcgca
      601 ttacacaaac agctataata ttctatagcc attaataaat agttatcgtc tttacgttta
      661 cagttttgca taccaatctc ccctgggttt ggttattcta aataaaaggt ccaggcagac
      721 ctatttagaa ttctactata gagccatttg ttggttcaag ataaacacct aacgtttgga
      781 tcaccgagtg catctgcagc caattaaact actactaaat taacagctaa ctttctccta
      841 ttttgttctt gtaaagcctt tcagaacaac caaatattac cactgccgtg atctttgagg
      901 ctatgaacta aatagtcagc attaagctca ggcattttat tttatatcag agacagcaca
      961 ttttggtagc gtatctca
//
LOCUS       KCKM01003223            1067 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50590apa ultra-conserved element locus
            uce-526, sequence.
ACCESSION   KCKM01003223
VERSION     KCKM01003223.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1067)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1067)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1067
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50590apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1067
                     /note="ultra-conserved element locus uce-526"
BASE COUNT          358 a          176 c          196 g          337 t
ORIGIN      
        1 agttattgct gagagctaga aaaattaaga tttactgtat gtctcagtaa actaatccag
       61 atgtggctcc ctatgtgtga tttctaaaat gcatagcaag ctatttccca acaggatatt
      121 tgaatatgat cacagagtca ctggagtagt tccagataaa aagtcataca gagacctcca
      181 atgcagtgca ttctaaaccc tgaatatcat cttttcttta ctctttttat tttttcgcca
      241 cctgaaattc agcacaggtt agcacagttg tgtggtcaca gattgaactg cttacagata
      301 aatgtggttt ctaatgtata gaactgttaa tgctctagac tgttcccaaa cattatatga
      361 agaaccactt attcaggcac ctgatcttta gaatgcagca tcgtttgtaa caattttaac
      421 gctaactaag tacactttga tgagacagca tttaataaaa tgctcattaa tttcatcatt
      481 agcaagggta tgctaagaag taagccagtt tcttatgtca cgcccaatta gcatcccatg
      541 ctagtaatcc cattagtatt gttgaattca ctaatggaaa aactaatggg catgctacca
      601 gggcacatta attgggcatg acaccagttc tggttttaat tattaaacta cgataatgaa
      661 atgtgtgttt gtaaaatatt aaaatgttga aataggagag aagacaataa aaaatagtat
      721 acggaaaagc atgcattagt atgtacggat atatagcttt gtgttgctat catgggacag
      781 gggagtgcag tgcagtctgc ctcggtacca agatgttgac tgaatggagt aggaaatatg
      841 ctgtaaatat tcatgggaaa ttattttttc tgtaatcatg tacatatgta cacatcctat
      901 atattttcat acacaggata cacagtgaca gaaaatgtac tgtgaaatgt agactatgtt
      961 tataaatcta cacgttgaca agcaatttct aatagatgca cattgctaaa ggcagaacac
     1021 taaattttaa caagacgttt ttagtattaa tcacaataag tgtttgc
//
LOCUS       KCKM01003224            1036 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50604apa ultra-conserved element locus
            uce-4697, sequence.
ACCESSION   KCKM01003224
VERSION     KCKM01003224.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1036)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1036)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1036
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50604apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1036
                     /note="ultra-conserved element locus uce-4697"
BASE COUNT          309 a          204 c          223 g          300 t
ORIGIN      
        1 aggaataaaa cagactgaaa ataatccatt ttaaacaaat ctttggcagc aacatggtta
       61 agcataacta tttgaacaac ttgcacagaa gattaacatt gttcagaggt tttttggctc
      121 agaatctgtt ttaacttaat aattcttgta cttactgtga tgtattgatc cctagtgcaa
      181 tgactggatt gggcaaccca ggtgcaacag taatagctgc acagaataga aacatttcct
      241 ttagacaaac tatcccaaag gggttataaa taggaaatgg acattaccat gaaaagtaaa
      301 gcttccagtg tgactgcatc ttgtgtagca cacttggaca ttaaactatg aagaattttt
      361 ttttcctgtc aagtgttaca aattgacgaa ataagtacat caatgttctc agtcattatc
      421 ttacttcagt ggcactttgt tttagtgaca gcaaaaaggg acagtggaga ccagacagcc
      481 ccagtgcagt ttatcaatga aaatctaata tcgtccataa gcaggggagt ggaaatcaat
      541 acttcattac caaattgtta gtgaggatga agaagaatag caggagtttt tttggcagtc
      601 ttctcggtcc gggttgtcgt gagttcaatg tcaggatcgg agtgacgcgc aggggcgggc
      661 tgggtgcggg aagcctgggc tggagagctg gaactaaggc atttgtcctg caggcagaat
      721 aacaataaca accactgtta ccaagcttct aacggcaatt ccagatttta ctgaatatgt
      781 acgtttatca acagacattt ttggaaatga gtcagctttg ctttactttc tccacccatt
      841 ggctgtgagc acgggcactg aagtgtgagt aaaccccccc agatccttat gtctttaact
      901 gggattagtg ggaaaaatcc aactgatgct gcagctctgc ctggcccatt gagtgtgtta
      961 ctctgcattt ctccctttcc ctcaaacctg gacaatataa tgagtttctt tctactgcca
     1021 gccatgcata aactct
//
LOCUS       KCKM01003225             761 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50619apa ultra-conserved element locus
            uce-3722, sequence.
ACCESSION   KCKM01003225
VERSION     KCKM01003225.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 761)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 761)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..761
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50619apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>761
                     /note="ultra-conserved element locus uce-3722"
BASE COUNT          238 a          144 c          129 g          250 t
ORIGIN      
        1 aatatatagg tccagattta cttcagactc tcaggtcaga tacagcaacc tgggttgagt
       61 tttctggcac caaaagaagt aagggctgag taataaatgc agtatggact ttttagaaga
      121 tattttagat aacaagcaac attttctgta ttatttctcc tttggagaat aacaagccac
      181 atatagcctg atgctgaata tgattggggg ggagagtttt ttatcttgcc ccctataata
      241 gattttttct tttgcacaat tctctctgtg aataacaaga gtggcagcca ttttctccca
      301 gttcaacatc aaaacccctt tcatctgctg tctaaatgca aacaaagcaa accttccacc
      361 aggcctttct ttccagataa attaaaactc tcatgtcctg gggcctaaat caagcctaca
      421 ggccttccct agataaatcc tttctcaacc tgaaatcttc ttgctacacg tgctccttgt
      481 aagataattt tgcagtagct aatcaataat gcaacagtaa attgcattta aataaacatt
      541 agcagccctc ttaatgaata aaacctcatt tgcaatttgt caaagtcaga aatgctggac
      601 tcttttgata ttcattagaa tattggaaat tggagctttg acaggtttta tgtatgttgc
      661 aattatgatt tttgtgaata aaggaagtgc tttattttca caagaattct tgaataaaaa
      721 cagtgatata tgctatggac ttgatagatc tcaattgctg c
//
LOCUS       KCKM01003226             532 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50649apa ultra-conserved element locus
            uce-2055, sequence.
ACCESSION   KCKM01003226
VERSION     KCKM01003226.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 532)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 532)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50649apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>532
                     /note="ultra-conserved element locus uce-2055"
BASE COUNT          185 a           93 c          107 g          147 t
ORIGIN      
        1 gacttataaa atcccttgtt gttctcagtc caccctgctg caaaaagcag gatcaaatat
       61 aaccgtttgt ttatcaattg ccaggattgt ccatacaata aatgaagggg gaactataat
      121 ttatatgtta atttgcgcta tgcgctcttt aatgaattaa acaatgaagg cttataatag
      181 atgaaaatac aaccaaatct ttgaaacgca caggcattgg ctcacaagac agctgtgcag
      241 ttgacaagta acatgagccg tatgtgagaa gaaggggaaa tcgtaagatt tgcatataat
      301 tattgagatc atgcaaatgt cagttatgag gagggaaaaa accacaggca tctcactgtt
      361 aaatcctgac agttggcatc accgaagaac tcaaatacac ttgagcactg gttggcagag
      421 ggtcattaaa acagaatttg cagagacatt agctccctca cttttctttg agtgacgttt
      481 tactattaat agtttgcaga ggctttgcag aaaacatatt aataagagaa ac
//
LOCUS       KCKM01003227             430 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50664apa ultra-conserved element locus
            uce-5029, sequence.
ACCESSION   KCKM01003227
VERSION     KCKM01003227.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 430)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 430)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50664apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>430
                     /note="ultra-conserved element locus uce-5029"
BASE COUNT          125 a           77 c           68 g          160 t
ORIGIN      
        1 ctctttctac ttaatatact cttaaatgtt gccatttcaa agctcattat acagttggaa
       61 agtaggatgt atataaaggt gttgaagacc taactgctca gatttatcgt acctttgatt
      121 gactggagaa atgactttca gttgacatct gagccaacaa gttagctgaa ataaaatttt
      181 gcttaatacc tttgcatcaa taatctaggc acagcatcat tgattgagaa agtctgatcg
      241 atagagtatt actgactgcc taactgtaac tttgccagac ttttttgtta attctgctga
      301 tgaccttcgt accattgctt ttcaggttca cggttttttt tcctttgaaa ttcaatttgc
      361 tccatttgct aatatttaag gaatttacac atccaattga tttcattcta cctgatacaa
      421 tatgagttta
//
LOCUS       KCKM01003228             550 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50679apa ultra-conserved element locus
            uce-4457, sequence.
ACCESSION   KCKM01003228
VERSION     KCKM01003228.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 550)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 550)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50679apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>550
                     /note="ultra-conserved element locus uce-4457"
BASE COUNT          167 a          101 c          100 g          182 t
ORIGIN      
        1 aatgagctaa tgaaattttt tggtgtgtct tttagagaat acatttgcat ttgacataat
       61 tactagtagg cagatccagc tacatccagg gggaatctca agacaactgc tttgccgact
      121 attagtgcct aatttctgaa tgtcaaaccc tgcacatctt aatttctaga gaataagctc
      181 aattgaactt gctccccagt tatgcaaaaa ctgctcagat aaaaccaagt ggacaccaat
      241 gtaatgaatg tggttattaa attgtttcaa ttgaaagaac tctattctta caccatcata
      301 atgggaacaa tttatcccca ctgatcggcc tgtctctttt ttctgagctc tctttgatct
      361 tgaagcatat tgcagtggtg tgtcctattg aaaagcaaaa ctggggcaat tttaatgctt
      421 ttgtacctta ccagtgctct attttttcgc tgtttaaaaa tagctgttaa ttataagtgc
      481 agtttaaatg tctcaagtga cccagaaatg caggttggaa tgagacagat tgtgtgtctc
      541 atataaaaca
//
LOCUS       KCKM01003229             360 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50695apa ultra-conserved element locus
            uce-3702, sequence.
ACCESSION   KCKM01003229
VERSION     KCKM01003229.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 360)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 360)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..360
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50695apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>360
                     /note="ultra-conserved element locus uce-3702"
BASE COUNT           88 a           76 c           76 g          120 t
ORIGIN      
        1 agtgttgcct gtaattttaa agatgcttgc ctcagggagg tttcgttttt ccattgaagt
       61 ccccttgatt tactgtacgc aatatgttac agcttcctta tttgctcctt tgggacagtt
      121 actgacagta aatctctatt aaaatattct tccatatggt tgcatgaaaa ttttattgca
      181 gtgagcctga ggctgaaggt cacagctgag tagctgcagt taagtattgc agtctatgga
      241 ctctgaggta catctgttct gggagctgga gcaaaattag aattttactg tcaatagcag
      301 ttctccaaaa ccagttccat ttgtttaccg tcgcaggcct gtagcactcc agtccccacc
//
LOCUS       KCKM01003230             544 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50711apa ultra-conserved element locus
            uce-406, sequence.
ACCESSION   KCKM01003230
VERSION     KCKM01003230.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 544)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 544)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..544
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50711apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>544
                     /note="ultra-conserved element locus uce-406"
BASE COUNT          164 a          143 c           92 g          145 t
ORIGIN      
        1 aaatacagta agtttttaaa ggaaagaaaa ggctccatta ttctcccatt aaactctccc
       61 tggctctccc cctctctccc ttccctctgt cagtctttcg ttcgctcact gacttccccc
      121 agcctctccg aagacagatc gttcccttaa tcactctgga aaagaacccc aagccgatat
      181 aatattataa ttaattaatt cactaaaaag gtattaaatt tcttttcccc cctgtggata
      241 ttatctgaat tcattgacct ttagaaaaat caccctctaa ttgtaaccag gttcaagtgc
      301 atttccagcc tgtccctttt acattaataa tatcttccag gactccacta tgctgcttaa
      361 atattgtata aatttcactg ccccctcaaa aaaggagaga gagaaaggca tgaaatgaaa
      421 actacgagct gattaaacca gctctggagt cggggggaag aggtaaaagc actcgaggtg
      481 aacaaaccca cagcaggacc ccgaaggggc tcgggactgg gaatcccaca ttcccaaggt
      541 ccct
//
LOCUS       KCKM01003231             939 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50726apa ultra-conserved element locus
            uce-2256, sequence.
ACCESSION   KCKM01003231
VERSION     KCKM01003231.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 939)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 939)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50726apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>939
                     /note="ultra-conserved element locus uce-2256"
BASE COUNT          298 a          203 c          170 g          268 t
ORIGIN      
        1 gtttagtgaa tattttatat catctccctg gctgattttt cagcacactt aattcctctc
       61 tcagatactt tgcttacact tggcatgcaa agagacacag ggttactgct aacaaagcag
      121 caagaacttc tctgaagatg tgagtaaagg ctctgacaca cagaatcgtg cttatttcca
      181 gacaacagtt tgacatctgc tccttcacgt aaaagtgaga ctttacaaag cccaacttca
      241 attcatttta aaacctcatt tgaagatccc attttagacc ctcttggtgt agatttcact
      301 tccccaactg cttaacatgc atgttggggc ctccaacact gagccatata gatttgtctt
      361 tgtcttttgt gttaattatt agctgctgca gagctgtctc tgtgggtgaa cgcacacaga
      421 aacaaaggcg gcaaggttgt aaaacctttt atctctatca gggcacatta tttgataagg
      481 tgcaaagcta atagcaacgc atgtcaaatt gtgtttagac agatcagtgt gctgggaatt
      541 ggaggttata tttgtctctg gaaaccagca cctggagcag caaagagaaa ttcataccag
      601 tattcactat gctatgtaaa ctgtaaacca cctccaagtg gttacttcac aaatggctcc
      661 aaaataataa acctctgtca tttcatttgc tttgcgcata tccttttgaa cttaatcagt
      721 catatattca cagaagcagt aaaaatagga aatagaatac aggacagagc aatgcagtat
      781 tacatcaacc ttacgcagcc tacgctttta agagcatctc tgagcaccca actggacaca
      841 ctaaatttgc agcaagatct aaacaactga ccctgagaaa caggcaaggg tgtgcatcaa
      901 ggcatccaaa gctgataaaa taaatatttt caaatcaaa
//
LOCUS       KCKM01003232             775 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50742apa ultra-conserved element locus
            uce-7083, sequence.
ACCESSION   KCKM01003232
VERSION     KCKM01003232.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 775)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 775)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..775
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50742apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>775
                     /note="ultra-conserved element locus uce-7083"
BASE COUNT          186 a          202 c          199 g          188 t
ORIGIN      
        1 agctccagat accctcgtca gaagcgcggg tgtcaatgaa ggtgggcaga gaggctttca
       61 ggagcaccga gctgtagtac ttgccagtag caggctgcat gtgagtccgt ttgactgtgc
      121 aacccgtgtg ctgaagtgaa cctgacgcca aagtcgtgct tctttgtcct cagtcccatt
      181 tggtgaagtg ccgagctgca tgccctgctg tcgtcgtcag tgtcatataa taccaacaac
      241 ttttggaaag cactaatgaa caagtgcaat ttcttttctc tattgttggg ttttttgtaa
      301 agttgctcaa atgctctcag gtatggcggc cctgaatgga ggactcggcg caacaggctt
      361 gacgaacggt acggccggca cgatggacgc gctcacccag gcctactcag gaatccagca
      421 gtacgcggcc gccgcgctgc ccaccttgta cagccagagc ttgttgcagc agcaaagtgc
      481 tgccggcagc cagaaggaag gtaagagccc ggcggagcga gccccatacc aaaagagctg
      541 cccgcaacca caggaaagcg gtgccatggg gtcatttagc cccagagacc tcgaggagcc
      601 taatcttggg gttgggattt ttttcggtta gctcgatatt gttactttct ttaacttctg
      661 atggaattaa ttttttaacc atccttcatc ggacatcctt tcttctacaa aatcattcac
      721 cgcctgccac ataaaaaggc accagtaaca aaaatcatcc cattatgggt gccat
//
LOCUS       KCKM01003233             354 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50756apa ultra-conserved element locus
            uce-7350, sequence.
ACCESSION   KCKM01003233
VERSION     KCKM01003233.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 354)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 354)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50756apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>354
                     /note="ultra-conserved element locus uce-7350"
BASE COUNT          110 a           76 c           55 g          113 t
ORIGIN      
        1 catacctggt tcatttatgt ccgataataa aacaaaatcc tctttaaaag tcttcagtac
       61 ctagtaacag ccccatgaag aataaggggg ctggcagggg aagttgtcag aaaatttaat
      121 ttcctttcat tagctagtct gctccacaaa tcggtgcttg ttaagttcaa agcagtcctg
      181 aaagcaacat cagttttaag tctttttact ccagtcacat ctgttaatga gatttttcca
      241 aataacaatt gtttttaagt caagagataa atctagtctc ctcccaaaaa aaaaatcagg
      301 gtttactgtt ttattacacc ttgctgcttt ccatgaccct gcaccctcca aatt
//
LOCUS       KCKM01003234             336 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50771apa ultra-conserved element locus
            uce-6294, sequence.
ACCESSION   KCKM01003234
VERSION     KCKM01003234.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 336)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 336)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50771apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>336
                     /note="ultra-conserved element locus uce-6294"
BASE COUNT          114 a           53 c           50 g          119 t
ORIGIN      
        1 tgaacagttg tatgttttcc aacaattaaa tgcttttaaa ataaataatt aattgttttt
       61 aacaggcaag atgcagcttt tgaagcaatg aatatataaa gctttatttg ttgacctcaa
      121 attactttac tcctgttata ttgataacat ctaggtttct caaaaacctg ctggcacaaa
      181 atcttttcag ctttattaat gattcagatg gcagtttctg aagagacaag tcccacagag
      241 aaggagcact tgattaatga cctggaaaca cttttccttt tcagctgatt aaataaaatt
      301 gactggattt ttacattttt ataataaaat gacccg
//
LOCUS       KCKM01003235             526 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50787apa ultra-conserved element locus
            uce-3767, sequence.
ACCESSION   KCKM01003235
VERSION     KCKM01003235.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 526)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 526)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50787apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>526
                     /note="ultra-conserved element locus uce-3767"
BASE COUNT          146 a          125 c           90 g          165 t
ORIGIN      
        1 agtgttttaa agaaaattca tggatcaagc atctattttt cttgctaact tttcttttaa
       61 aaatttatat tctttttctg gtagttttgc acattactga aacaagacct cttcaatatc
      121 caccggtttg ctgaagatgt taaagcgttt gtctgtggcc agcctcttgg taacatccct
      181 gagaaacaac cgcagctctc tcaatgtgtt ctcttcctgg tcctccattc gctgtttttc
      241 tgcttctgac agctcccggg caggacaggg cagtgcaagg ggaagaactt ccagagcacg
      301 aagagctagg gaccaagcca gacaaatatt aataacacag tggctcttgg gactacacga
      361 ctccaaatct cattcaatac tctacataat ttatatatcg atcactgcat ccttaacccc
      421 cagctcccct ttgccaaaac tggtgactgt aaggcacaaa gtttattcta ggcactaatg
      481 aacactgcta aatattaatt atactgtcat ttatccacat cttttg
//
LOCUS       KCKM01003236             907 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50802apa ultra-conserved element locus
            uce-1264, sequence.
ACCESSION   KCKM01003236
VERSION     KCKM01003236.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 907)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 907)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..907
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50802apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>907
                     /note="ultra-conserved element locus uce-1264"
BASE COUNT          287 a          160 c          146 g          314 t
ORIGIN      
        1 acagttatac ggttatccta agtttttgac tcagacatct gtgtgttttc taatttatca
       61 ccttaaatat aacatgataa ttttttataa cgtaataaaa tcttcaggta cctattttgt
      121 atagatttaa aaatactgat caaatgttat tttttgcagg ttttcacttt ttgatttgaa
      181 cttgagatct aattaattat gaaatctgct ggacaatttt taaacaagat acactatcct
      241 aagttttgtt cactagcaag actgctgctg aagaaaactg tttctgaggt tccagtcaaa
      301 aagtagtaat gttctatcca cacattaatg attccaaaat tctccattat gaacaatatt
      361 tatcaaaaac agcccactat cagatgaaag atgtgcctta tcttttcttg tcaactaaag
      421 cattattcac tgaaagtttc tttcatatct gtttcagggg tttcagtgtc attttaaatt
      481 gcaaatcaat catagatcat gcaagcccta cttctgtagg agagattaac gctctggcta
      541 aaattgttta caaagccatt tgtaaacctt ctgctgatgc agatgaggca agtttaccag
      601 tttaacattg ttgatcccag agaaagcctt aagcaatgac ttcagagggc aaaaaaattt
      661 gttcatttat cattattgtc atgggctttc gcaaatgata acaatttgtc ttcatcctat
      721 ttttagacaa tgagccacaa tagagtccag aaagccattt tgccagatgg gagaaggtgc
      781 tttcattgca aaatgttgtc ttttcttttc ctgccctata aaattggctt aagtgagaac
      841 caaggatacg ttttaatgtc aggtttccca gtagacgtga tgacatacaa taacagcaca
      901 cagtgcc
//
LOCUS       KCKM01003237             838 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50817apa ultra-conserved element locus
            uce-5459, sequence.
ACCESSION   KCKM01003237
VERSION     KCKM01003237.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 838)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 838)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..838
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50817apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>838
                     /note="ultra-conserved element locus uce-5459"
BASE COUNT          247 a          154 c          152 g          285 t
ORIGIN      
        1 gtggtaaaac catccccaaa gaccagtgtt ttaagtcggt ggccagttct ctcaactgtc
       61 ggtcctgggc tttaatctcc tgaagtgtct catttttttc catctcaaaa gggagcccct
      121 ctttctcttt tcctttctct ccttctcgca gttgctcttt gagtaaggcc gtacctaaca
      181 attattcagg gaaacattat gttgacatta ctgtttagaa aataaaaaag aaagctagag
      241 agtaacatca tgaccatata gcactagtga atgattaaaa atttagatga ctgcctttga
      301 aacaataaaa agctttcgaa gcttcttaat gagcagctat cagaaataaa gcatttaaaa
      361 cttcagaaag tgcctctgtg gaaatttcat tgtctttgat gctgtaaaat aactgcaggg
      421 tggattcatt tcaagttctt tttagcatac tggtcgttta gaaatattgg gagatatctt
      481 tcttagcaat atgtggggaa aacaatgtct tggtcgcttt catttatctg caatttgaca
      541 ggagtgcagt ttattaactt gaaaagagac agatacatta tctgaaacac agagagtata
      601 gtgggtattg cctccttttt ataccagtgg gagtccatga cactttgaac ttgctcacca
      661 ttaaacgcct tcctgagttg ttgaagaggc ctttaaaaag ggagcctgtg catttatgat
      721 gtaaattcgt tattttgaca gtctttgaaa tctgtcatat tcacgtccaa tttaatgcac
      781 cgcaaaaatt cttttctttt aaaatacttt tcttttaaga tttcaaagcc attttcat
//
LOCUS       KCKM01003238            1040 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50833apa ultra-conserved element locus
            uce-6355, sequence.
ACCESSION   KCKM01003238
VERSION     KCKM01003238.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1040)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1040)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1040
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50833apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1040
                     /note="ultra-conserved element locus uce-6355"
BASE COUNT          319 a          186 c          168 g          367 t
ORIGIN      
        1 tataccctaa agagtaaaaa cagtatatca gtgatgttag ttttagccta acattatttg
       61 gcaattttga tcattaggga tggaattaat caaatatcta ctgtgtccca ttttttcatt
      121 ttatcttcca ttctgcattt actattttta tcttttttaa cagctactgc tcagtggcct
      181 taaaaaattt caccattcaa tagaaacttt tctttccaga gacttatgct aattagtacc
      241 ttgtttgtgg cttcactgtt atttatgagc tactctgagc cctgaataac gaaatatcag
      301 gctatctgct taaccgtcta ttaatttgtt tatctttcta tctgtctact tatctgctga
      361 aatttaaaac agtacaataa ctttaagaag agtgacatta atgcagcatt agattaaaag
      421 aatgttactt tatacaggca taaatgtaat ttagaggcac ttagaggaag ctatatactt
      481 aacatgattc ttgcccagtg aagacaggtt gatcccactc attttgagat tgctaatttg
      541 cagttaatta ggaagattga ttctgttctc tgatgcatag gcccaaccct aaatgcattt
      601 ttccggtttc cgtggcacca tgctagttat cattgtcatg gtgcaagtat aactgaatga
      661 catggtcctt cataaagcac acctcttggg gagtttggga aagtaaccat tagcaaacat
      721 ttttctggtt ttctctgtag actaaaatct agtgccatct gcatttaaaa caaccttcaa
      781 attccattcc tttgagaaga tttattgcaa ttagcaaata aaaccagaga gttgatttaa
      841 tcctccgcta aaataacaca atttcagagt tagagggaaa taaaatattg acattttgct
      901 tgaaggaact tgtatcctta aataaacgca gtgggcatgg catacttaag cttgtacctt
      961 ttatagaagc taacatttat tttcaatgtg ttatctcttg aggagattct tcccctgtac
     1021 tctcaaaata caagctggta
//
LOCUS       KCKM01003239             862 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50849apa ultra-conserved element locus
            uce-2376, sequence.
ACCESSION   KCKM01003239
VERSION     KCKM01003239.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 862)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 862)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..862
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50849apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>862
                     /note="ultra-conserved element locus uce-2376"
BASE COUNT          252 a          176 c          143 g          291 t
ORIGIN      
        1 ttgttgtaac attttatttt ggctttgttt tgtgtgagaa agtgtaataa gcctgattga
       61 tctatggact ttattctttg gggaaatatg agtcacagat gcatactttg gagacattct
      121 taaaaatatt atctctcaag tgttgtgtga agctttacag ccttcttcct gcaaatcttc
      181 catgtcactg ttagaactaa gtccaaaata tttacatcta aacaacttat ggcatctgtc
      241 aataaaaatt cagtctgctt ctaaacattt ctaagtgcaa catttaaaac tgcataaaca
      301 ggagtgaact agtagcagtc taaagttgtc atcattgaca gttatgattt atcttaactc
      361 tccctagcca tttggctaaa gttttaagta aacactttca gtcttcctca tgttctcttt
      421 actgccacct cccactaata agagatgttg ccaagaaaag cagccagaca gttcatttac
      481 ctcccaaact tgcctgaaag tagcttgcct ggtttagaca agggttgaaa ctactactgc
      541 acattttcaa cagatggaac aatgcttcac aaattattta cattaaagtt atttgctttc
      601 aggatgtgtg tttaacgaat ggttagttga atgaaatatt gcagctcaga cagagaatgc
      661 aagcaattca ggcaagccat ttatggtgat agatgtagct gtgatcctta attttctaca
      721 aagcaatgta gcattttgtc ctcattcttc actagctcct tgaatctgac aaaagcatgg
      781 tttctatttt caccctcttc ctcctccgct accccctccc ctgcaggcac agttccatta
      841 atcagctatg ttgtagtaat ac
//
LOCUS       KCKM01003240             915 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50864apa ultra-conserved element locus
            uce-4121, sequence.
ACCESSION   KCKM01003240
VERSION     KCKM01003240.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 915)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 915)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..915
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50864apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>915
                     /note="ultra-conserved element locus uce-4121"
BASE COUNT          210 a          196 c          185 g          324 t
ORIGIN      
        1 ttattaacac cacctctgct ctttcttcat tagttaattt tgggtagtat atgagcatgc
       61 tgctctgaac ccttatacaa tgagaataaa gccgcctttt acactcactg tacttcctgt
      121 ggccacctca agaagctcca tcttcaaacc cgtctagaac ctgctcgtgt ggggttgggg
      181 gacagacaaa gcgttttgcg ctgcatggct tgtcttgctg tcagagtaac aacattcatg
      241 ttgtataagg ggacctacct gtgcaattta acttggttct tttactgtat ttttcttctc
      301 tttatccttt ttccttttaa tttctgttct taaactgcac ccaagatgcc tttgcagctt
      361 ctcctgggga agcccctgca gcagctgaag gggcagcagc accagctacc ccaacccctg
      421 tagcagcagc tcttgatgca tgttcaggaa atggtgggtt ttatgtcatg agagagtctc
      481 ttgttttgct gttttgttct gagttggttt tttgctgttt tgtttaaact acatggcagt
      541 gtgttttttc tgaaattttc atagtgtttg caattggtca aaacaaacct tagactgaag
      601 agcatgtata acaaaactgc ctgtttcaaa gtcccagtaa ccttgtgctt atttgctagt
      661 gctaataaat aattctgtca gtgctgagtt ttgtaagcag taacctgcta aactggatat
      721 tcttttatca tatttctgtc tttttttggc cttatcaaac agcccttgaa agttctgccc
      781 tttagtaact agactactca gcctttcaga tggtctttat tttggaaaaa catacgcatg
      841 tctggataag taagctagac gttagtgacc tcctccgtgt gcgtgcgtgt atttgcagta
      901 tgtgcattgc ctgta
//
LOCUS       KCKM01003241             794 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50879apa ultra-conserved element locus
            uce-3054, sequence.
ACCESSION   KCKM01003241
VERSION     KCKM01003241.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 794)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 794)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..794
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50879apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>794
                     /note="ultra-conserved element locus uce-3054"
BASE COUNT          258 a          168 c          146 g          222 t
ORIGIN      
        1 aaaaaaaaaa aaccacaata caaaaccccg catatatatc tgatgtattt tatacatatt
       61 catcctcata acttgacaga tgggaggaat cttgcagtca tttctgaaag cagacaaaag
      121 gccgttggtt ctgctccaca tgatgatttg tgaagacaga atatcacccg cttccgttga
      181 tgattatata gttctatcca tctgtctgcc actggaggtt gtgagagtga gatacagctc
      241 acaccgtctt cataaacaaa agtagactgt gctgtcagta gtcagacacg ccaactaatt
      301 ggagctgtcg acagacacaa tattctgtgt caacagctct ggtaacagtt tgaaacagca
      361 atgatatgtt gggtgatggt gaggatgaca catatgtctc taatagcatg ctagaaatct
      421 gacataacta gaaaagaatt actaaaatgt aattcccagc ctctacttct gctgttaaga
      481 cttaccagtc agcacagaaa gagacgcggt gtgtgtgtgt tcatgcaagt gtgctggtac
      541 ttgtacacat cttcttctgt atcacttcac atgctgacag cttaatttga tactcataac
      601 acctaactta aaaactaagc tttccgctca atttcaagga attcaccaaa attcctacac
      661 aaatttcaaa cttaatgaag ggaccttttc caccactttc ttatgaattg gaaacaaact
      721 aaaccaggtc aaacagcagc cacgttaaat ggacagttcc tactgtgtct gtgctggaaa
      781 gaagagtact atct
//
LOCUS       KCKM01003242             934 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50895apa ultra-conserved element locus
            uce-4870, sequence.
ACCESSION   KCKM01003242
VERSION     KCKM01003242.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 934)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 934)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..934
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50895apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>934
                     /note="ultra-conserved element locus uce-4870"
BASE COUNT          289 a          168 c          186 g          291 t
ORIGIN      
        1 gtaattcaaa caactttgtc ttctcccaag aaaataaaga aattactgaa attaatatta
       61 attaaggata tatgggaaaa tgcttctgca gcagaggagt gagatctctc taatttcttt
      121 taaaatgtgt ttcagacgtg gtagctgcca taatcaaaag gataaatttt gcaaacatta
      181 tgaacatatc catttgggaa gtcaaaacaa atatgatgta gacttggctt ttgtcataga
      241 taaatagttc tttttgtagc aagccctgga gtatttagag caacctagca aagtccaatg
      301 aagtgtcaac tcaagccagg agcattatta tttattgtca gttaggacct tcatcactta
      361 cagacatcac tggaaatatt actggtgatt gatactgatg gcaatgatga ttactcttgc
      421 aataagctta attaaaataa tgaagtactg ttgcacagaa cttggttgtt gcccaggcag
      481 gataatgtat aagcagcaca acgaagtcat cagctcggag agtgcttcat atttcaagtg
      541 tgacattgct agggaagcaa agaggcaccg tgtgccattt ctccactatt cctactccat
      601 ctcctacgtg tgtgcatata caaataattg ctggagtaga cgccgcagtg attgcttctt
      661 agatattaat cctgtctcta ccataatgaa gtgtacgttg gtcatagttg tggtatggct
      721 gtttttataa gatgctgcaa gtctctggga aacttttttt gtcattattc ttcagggagc
      781 tcttctctga ccatttggtt gtggcagttt aactgatttt catctgccac tgtgagtaac
      841 ccatgcaatc aaagaataca aaggacctgg aggcaggaga ataatttctg acctttcatg
      901 ttttaggtaa ccaattccag aaaaaacccc caag
//
LOCUS       KCKM01003243             983 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50911apa ultra-conserved element locus
            uce-5205, sequence.
ACCESSION   KCKM01003243
VERSION     KCKM01003243.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 983)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 983)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..983
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50911apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>983
                     /note="ultra-conserved element locus uce-5205"
BASE COUNT          277 a          194 c          206 g          306 t
ORIGIN      
        1 tttttttttt ttttacgaga tgaaagtagt ggaagaaatt cttacaagaa ttctctgtcc
       61 agttctctct tttctcagca taatctttct tgtctgtcag cagccatcca tgatgctgaa
      121 gcttatacct atagtttctt tttctctcat ggctgtaggc atggatctct tctccaattg
      181 cacggaggaa tgtaaagcac tgggccactc ggatcggtgc tggatgcctt cctttgtccc
      241 atccgatgga cgccaagctg cagattaccg cagcaatctc catgtacctg gcatggactc
      301 cgttccagac actgaagtgt ttgaaacacc agaagcccag ccgggggcag aaaggtcctt
      361 ctccaccttc ggcaaagaga aggcccttca caacactctg gagaggaagg agttggatgg
      421 actgctgtct aatacacgag cgccttacaa accaccatat ttgagtaagt actattccaa
      481 aagctgtatg aaagcattcc ctttgcggga ataaaaatta gctctttctt ctattcagag
      541 taggaataat acagacataa ttttaggagc agtggggaaa aatggcttct cttggattca
      601 ggcaccactg aagaaagcat tgttcaatgc tttctaaaaa agacaaaacc tgaattgttt
      661 taatgtgaca tgactgtcaa caactaaagt atcatctggt attagcaggg aagttgctca
      721 attttgtttt gtgatgctgg attgttttct aagttttctt ggatagatgg tttaaacatt
      781 gtcattgcca ggctaacatt ttttaaaaat aaaattaagt tgagagcact gccctaggag
      841 cttcttttta agattgagca gtatcttgtg aacaaacagt atgtgtattg ttttgaagta
      901 attattgaaa tagttagcat taagagtctg gaaggaagaa aacaaaactc tttgccttcg
      961 gtctgatcct ctttcagcct atg
//
LOCUS       KCKM01003244             744 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50927apa ultra-conserved element locus
            uce-6786, sequence.
ACCESSION   KCKM01003244
VERSION     KCKM01003244.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 744)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 744)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..744
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50927apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>744
                     /note="ultra-conserved element locus uce-6786"
BASE COUNT          241 a          170 c          133 g          200 t
ORIGIN      
        1 agagcaatct cagactatca ttttgttctg gaagctaaac atacaaaaac tcaaaaatat
       61 tgtgttgtaa gtagccaaaa agaagagaga gaacaatctc ccagtggcac tgggctcagt
      121 ctcagctttc aacctagaag tttcccaccc accaccctgc ccttcctcta gaaaaatcca
      181 gttacctgtg atgtgaagtc atgctgttgt agctgtctcc cctctctcaa gtcccaggat
      241 ctgacagtgt tatccaaacc tcctgtccag agcttggtac catcattaga aatgtcaata
      301 cagctggctc catctgtgtg gccctggaat tgcctgataa aacaaaccag actgaataat
      361 gatttcctgc cacagctcaa ggtaaacact gttgtggtgt tagttttgga ctctgtatgt
      421 gtgtgtcatc tcttctgtgt ctcctgatca gcaaaaatca gcccctccct cttactgagc
      481 acataataca acagtattac aaatatctct tccaggtgct aaagaaatta attgcatcat
      541 ggccagctga acaaaatcaa gtatctccta tcagattttg aaaagcaaag gaaaaacttg
      601 tgagaacatt aaagtatagt aactacagtt aaaagcacta aggaaaacgc agataaaaac
      661 aagtgctgag agaacagaac tcctccagtt tcaaaaaaca gcttccgtat ttttctttgg
      721 ctgcaagtca agatgataaa taat
//
LOCUS       KCKM01003245             785 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50943apa ultra-conserved element locus
            uce-6454, sequence.
ACCESSION   KCKM01003245
VERSION     KCKM01003245.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 785)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 785)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..785
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50943apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>785
                     /note="ultra-conserved element locus uce-6454"
BASE COUNT          192 a          171 c          171 g          251 t
ORIGIN      
        1 gtgtctcctt tcttacaggg agaaaaggta agtttaactc tccttagtat ttggtttgca
       61 gcctatggct agtctacagg tttcccccct tcttatctcc tccctgtttg actccagttt
      121 tgatacttgt gttaactaac ttgtataaac cagttctttc atgctgttct tgctccgtaa
      181 aggccttgca atggaaaact cacaaagtgc gttgattcaa cagagtgact gagggtttcc
      241 tccctcttct ttttgcctcc actttctctt gtctcacagg tctgcccatc ctcttcctcc
      301 tgcggtgagt aacgccagca gcctctgctc gctttgagac atttagagtc tgaatcgttc
      361 ttttaattta aggtacccca gagttcatgg cccccgagat gtatgaggag aaatatgatg
      421 agtccgttga tgtatatgct tttgggatgt gtatgctaga gatggccacg tctgagtatc
      481 cttattccga gtgccaaaat gctgcgcaga tctaccgtcg agtgaccagt gtaagtccct
      541 ccccactact gattctaaag ctactactac tagcagcaaa ggagtacgtc tggataacag
      601 taccgtgcaa gtgtgtggaa aaagtgaaat taatgagttt ttttggggat gggtgggaag
      661 atataggatg gttcaactta ccagtcaatc agaagcctgt cagatatgtg aatggaacta
      721 aaattttgca tatattcata ctcttccttc agtctgtaag aaaatactgc atggggtttt
      781 gaaaa
//
LOCUS       KCKM01003246             501 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50957apa ultra-conserved element locus
            uce-4862, sequence.
ACCESSION   KCKM01003246
VERSION     KCKM01003246.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 501)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 501)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50957apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>501
                     /note="ultra-conserved element locus uce-4862"
BASE COUNT          158 a           89 c           91 g          163 t
ORIGIN      
        1 aaaggaaaaa attgaaaaat ccaaagttca tgtatttccc caattttttt tagaaaaaat
       61 ctctacagac agagagaatt tgcaatgtat ctgcatagat cagatctctc gcttttccat
      121 gcacctcctt aaaaacctgt aggaacaaaa ttttccctct gcacaaaagc tgctccctgg
      181 atcagatttt gtacttgctg ggtatttctt tggctgatgt cgtaggtccc ttggtaatat
      241 agaagttttg aaaattaagc atcagcactg agaactggga ggacaataga tagaggagct
      301 tcatcccagg agacaaggaa taaatattgt atcttcgcct aataaggaac tgtaggttct
      361 ttcaacattt ttatacattt tttcctccac tctttagaat gctttttctt acccaggcta
      421 atatgggagc taatctgatc gaagggggta ttttgtgtac attttattgg gaagacataa
      481 agctaacata tattaatata t
//
LOCUS       KCKM01003247            1035 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50972apa ultra-conserved element locus
            uce-11, sequence.
ACCESSION   KCKM01003247
VERSION     KCKM01003247.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1035)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1035)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50972apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1035
                     /note="ultra-conserved element locus uce-11"
BASE COUNT          297 a          202 c          192 g          344 t
ORIGIN      
        1 tgaattcaga aacgcggaac agttttgcct tactgtagcc tgctctgtaa atcagcaaac
       61 aaaatttggc agctggagag ttttattctc cataaaaact gtacttgaaa gtgtttgtcc
      121 gcactctttt ctgtggattt gcacagatat acttttcttt ggcatcatgt gacttttcaa
      181 gtaaaatgta ttttgaaatt taatgagaag gtaaaggatg catgttacac tattaattac
      241 ttttcacttg cccattaggc tgtgctttca cctttttaca agaagacatt taaatgcctt
      301 ttggccaaaa atatacagta ggaaatgtta tagccacccg gagattttac atatgcctca
      361 ggtaggaatg aataaacaac tgtattcact ataatatcac ttcatgcaag tttctcttgc
      421 cactagttag gccttaatat acttagaagg ttgctcttct aatttgaact gtgcaagact
      481 ttggctggag gctacttctg tgtcccagtg ataaaagaag acataaagca gcccagtgca
      541 tgatcattct ccctggctgt cactgaatca tgtttaatag catctccatt gcagctttgg
      601 ccaatttgct tgcaatggca tccctttcca tgggcttgct gctcagcagg ccctgaagca
      661 atctatgaat aacttcccaa cagatgctgt ttatgaattg aagcaaatgg cttccctgtt
      721 tctctttttt ctcacttcaa taattttcag ttacattacg atgaatattt atagtcctgt
      781 agcagtgcat aaaaatggga acaagcagac ctgtgcattg tttcatacgt gagtgctgtt
      841 ctaatgggtt ttggctcaat ggttttaata atgttctgtt gatggactga aaagagaatg
      901 caaattgtag atcagtcact tccattcact cttttagcag actgggcatt gatgaaagac
      961 tgtattaaga gcacgtagaa tgcaccttat cttctggaaa taatacaccc cttaatacaa
     1021 gtctacaata ccttt
//
LOCUS       KCKM01003248             779 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 50988apa ultra-conserved element locus
            uce-2357, sequence.
ACCESSION   KCKM01003248
VERSION     KCKM01003248.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 779)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 779)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..779
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50988apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>779
                     /note="ultra-conserved element locus uce-2357"
BASE COUNT          238 a          161 c          165 g          215 t
ORIGIN      
        1 cctggggtct catagttcag gaagcctctc cctcctactc catcccattc cagtaaccaa
       61 gcactttcca ctcatgaata caatgattat caacttattt ttcacttaag gggggaggag
      121 gagggggaat ttaaactgtc tgcctgacaa tgctttcaaa tggtgatgaa atgtcttctt
      181 catatctgaa gagaacatga ttattagcac tgaatctgac agacacgatt tctgaatatt
      241 tttgtggcat taatttaaat caatgtaatg tttgaaaaca tttcagcccc tcaaacagct
      301 gatgcagctt agattcaatt ataacaaatt gcaacacact gtcaagtctt tttaccaagt
      361 cattagtcag ggattttgaa tgcgtggcct ccgaacggag ttcggctggc tgacagctct
      421 aattgttggg aactgctaaa ggattgctaa tgaactgggg gatctgttgg gcctgtagct
      481 ttcttcaagg ataaattttt gaaaactttc acaagatcaa agcggcataa catggaccat
      541 ttgctaaatt gtcagcagta gagtgaagca gtctgagtcc cagctttaaa gctgaaactt
      601 cagtagaaaa caccatgcga ctcctgcccc tgagcttttt tcatgtgtca gtaaaaccat
      661 accaagaaac aatgacttga agaaagaacc ccagagccac aatggccgct acggcttaat
      721 taggaggagc agaaaaggag acaaaaattc ctccctgttg ttagtgggtg caagagaga
//
LOCUS       KCKM01003249            1108 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51004apa ultra-conserved element locus
            uce-4888, sequence.
ACCESSION   KCKM01003249
VERSION     KCKM01003249.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1108)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1108)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1108
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51004apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1108
                     /note="ultra-conserved element locus uce-4888"
BASE COUNT          306 a          231 c          247 g          324 t
ORIGIN      
        1 atttcactgt aaaaggtatt attctaagca gttacgtgga ttaaaggtaa ctggaaagat
       61 ggagacactg gcaagatata gaaaaatata taaatatgta aatgcataaa gggaagtcaa
      121 gtgtgactcc ctttcctaat tgcctaacat gattcccact agatgcataa attacagctc
      181 ctattaacag cactatgaat aataatcagt ttactttctg gcttgtatct aaatatactt
      241 tctatatgat ttcatctttt attcagctgt ttaaaagcag aacatctaat tacagttcct
      301 attagtctac attaatttct tttttgccac agagcatgtg tgatgactga ttttctaaaa
      361 acagacagaa ttttttagca tatggaaaaa tcatgttatt attaatacat tcccacatga
      421 ctctacattt caattccctt aattatttag tcattgctga ttatgtcttt tcacaattca
      481 ttatcccatt tcctgcaacg tgggcatttt attcattaag tgtcaaaatg aagggcctga
      541 cctccaggaa gataatcagg aaataagtgg cagatataaa aggtctgggt ttcccttaag
      601 tgctcactta tttcagtagc tatgccatgt ttttagtaag cggtgacaga aacaaactgt
      661 tgttggtaat tgcagaaagg cgcggggctg ccagcttgtg tgagctctgt tttccctccg
      721 cgtgtgctgc tcacgtcagc tgatggttcc tgctctgctt ctgacaagaa cggggtggcg
      781 tgacggtgaa gtggcactgc ttatcgtgca gtggcgcaga gcaacgctgc ctttcaaata
      841 tttagcgcca gagaagctga gctgctcagg tcgacctcag gagcagggac ttggcaggct
      901 ctcatcagct gcaggtggct cctgctcccc aggagacctt cagaccacac tgagttttgg
      961 gagggaacgc tgcctgctcc ctcctgttga agctggactt cagaggaggc aaaaaagccc
     1021 aagctagcag cccggaaggc atgaccaagg gtcacatttc cagtctgagg gttagactgc
     1081 acggctggag agggacagcc ctgggctt
//
LOCUS       KCKM01003250             739 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51019apa ultra-conserved element locus
            uce-5840, sequence.
ACCESSION   KCKM01003250
VERSION     KCKM01003250.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 739)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 739)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..739
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51019apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>739
                     /note="ultra-conserved element locus uce-5840"
BASE COUNT          220 a          145 c          146 g          228 t
ORIGIN      
        1 ataaaggatt gcagggcttc agccctaagt tagtgttccg tgtgagaatt aactacaaaa
       61 tgttttgttt tgagaaagaa aactgaaata aataaatatt tgtgtatctg gaaagactat
      121 tgcaagtcag cttcaggcac ctgcacctca tggtcttaag actttggaaa gagtgtgata
      181 gcaagtactg ctcctgcatc tgctatgtta gcctgtacag caacaggaac acttggggaa
      241 aactccccta gttcatcaca gagactctct tacctgatgg tctcctataa accagcaaga
      301 ttgatgccct tgtattggtc agcatgtaaa ataacctgtc atcaccacgg aacgtgatgt
      361 gcagagtatc agtgtaactt gaaattcata gcactttaac acctgtttcc atagctacaa
      421 tgtaatccag acatctgaga ggccagcctg cctttgccag gcctctaatt tcagggaaat
      481 aaattaagta aactgatcat gaggcctgga ttatacaatt tctttaaagt atagcaacca
      541 gacctgaaat ttaagcagga atgaacattg tttggataca gtggataaaa ctaatttcct
      601 ctaacctttg taggaaaatt tgagtgtagc atcctctgta tcttcttttt ccctcccacg
      661 agcatgttgt atgttatacc tggcagttat atttgcagga ccatatttct tgatttttga
      721 gaggttgtac tgtattctt
//
LOCUS       KCKM01003251             950 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51035apa ultra-conserved element locus
            uce-4704, sequence.
ACCESSION   KCKM01003251
VERSION     KCKM01003251.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 950)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 950)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..950
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51035apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>950
                     /note="ultra-conserved element locus uce-4704"
BASE COUNT          260 a          196 c          193 g          301 t
ORIGIN      
        1 cagctcctca tttgcagttc taatattgct taaggataat gaaaagcctt acacaaactt
       61 gtgaatgatt aacaagacaa aggcctttta aatgggcttt tatgagagct aaaccggggg
      121 tgaagccttc agtaattgtt catatttcat ggggacttgg cttttcataa attcatctca
      181 gtgtcatctt tcatacgtat tacagtatcg gttcattaaa attctcagtg cagcactgaa
      241 cctggtcata ctgaaatggg gctgacaaac ctcatgtctg ctgcacagat aaccagacct
      301 tatgaaggtg aaattagttt tcaggatcta tactgttcac ttgattgatt ccgtcttaga
      361 agtcatatga cttaatgttt cctgcatggg ctgccactgt catgcaaaca tgacctgata
      421 acacattgtc aggagcgctc cagagagcta acagcaatct aacatctttc tactgagtgt
      481 gaagttccat ctgaaatgtg catatttgat aagcagttcc tcttcttcta tctgtccttt
      541 tcattttgag aaagttaatc ttctctgctc cactgaatcc tgtgttgaaa tgagctggct
      601 tggaaatgca gtaggtggcc ccatatgcaa ggatgtgggc tggctgaacc ccctgggaca
      661 gacaagtttc accactatcc ctggacagtg gtgcgaatga gagcagcagg acatcatgct
      721 gctcagaccc ttttaaggag atgcactttc aggcatcagg acaaaaattc ccttgacctc
      781 aattttgttg ctgtttggtc ctcaggtttg gggccatgta cagcatatga atcatttttt
      841 tctcattaag agatattgtt agcaggtgtg tcatgctatg tataaaattt atttttccca
      901 tgcaacacct atacataatc tcagtgcatt ttagaacaat tttaggcaat
//
LOCUS       KCKM01003252             273 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51049apa ultra-conserved element locus
            uce-3604, sequence.
ACCESSION   KCKM01003252
VERSION     KCKM01003252.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 273)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 273)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51049apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>273
                     /note="ultra-conserved element locus uce-3604"
BASE COUNT           63 a           79 c           75 g           56 t
ORIGIN      
        1 cggggggagt tacgcgtgga agggggagcc gccgccgacc aatgagcgcc cacgtccgcc
       61 cgcacgtcgc tccgcccccg gctcccattc atcaaggggg gggacggtgt cgtcttttca
      121 attcatttat ctgcaggaat gattgccgct atcagtctcg cgttcaccgc ccggctgagg
      181 aggtgaaagt ttctccccag gaagataaac cgcaaaagac aatattgtgc atgatttgcg
      241 cctttttttg caaagcaaaa aaaaaaagcc ccc
//
LOCUS       KCKM01003253             532 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51065apa ultra-conserved element locus
            uce-7557, sequence.
ACCESSION   KCKM01003253
VERSION     KCKM01003253.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 532)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 532)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51065apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>532
                     /note="ultra-conserved element locus uce-7557"
BASE COUNT          181 a           94 c           80 g          177 t
ORIGIN      
        1 aggtattttc ttcttagcca tattttattg aaatgtcaac tagtactggg gatctttcca
       61 tggttttttg aaacctagaa atagcttggc tcttacatga tactttaata atgttgccaa
      121 tcctctgata agttgttcac atcagatatt tagccccaat acctaatgct tgagaatcta
      181 cagtgattct cttcacgttc cgcctctgca ttccaagatt tatgaatatt aagttgtgct
      241 tgccccaaag caaaagtata ctcactaaga tatttgctga gatcaggagt ctctctgccc
      301 catttttaaa acaaaggcat taataaggaa gcactataaa atgtacgaca ctgaagaaat
      361 aaggaaaatt cagtattttt aataaagtga gaaataaatc ctctagttca aagcacccta
      421 tttgaaccac tctaaataat gtaaaagagt aactatttat gacacttgta cagaataatg
      481 tctgcttata agtgtgaaaa gaaattattt ctaaaactat gaccattatt tt
//
LOCUS       KCKM01003254             377 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51079apa ultra-conserved element locus
            uce-5987, sequence.
ACCESSION   KCKM01003254
VERSION     KCKM01003254.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 377)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 377)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51079apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>377
                     /note="ultra-conserved element locus uce-5987"
BASE COUNT          135 a           51 c           72 g          119 t
ORIGIN      
        1 aaactgaaat acgtacagaa agaggttaat accaattata aattcacagc tcattatata
       61 gttctcaaac taatacagac acaacatgat ttaagattgg aaactgtggc taaaggaatt
      121 agttggctcg gcatgaaact aggtttactt aatcaatgtt acttccacta gaaaagtgga
      181 ttagtttttc tttaagacag agttaaaagt tttgcagcta atttatttta ataagcattc
      241 agtcactgac tgctacagaa aaaggctaaa ctgtaatgaa gagccaggaa agaaagcatg
      301 acttaattat ttttctgggg tgggtaatga ataaattagc tatgctgtag gcttgctgtt
      361 tgtatggaat ttattac
//
LOCUS       KCKM01003255             849 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51094apa ultra-conserved element locus
            uce-6060, sequence.
ACCESSION   KCKM01003255
VERSION     KCKM01003255.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 849)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 849)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..849
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51094apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>849
                     /note="ultra-conserved element locus uce-6060"
BASE COUNT          246 a          164 c          143 g          296 t
ORIGIN      
        1 ttgtaagaca atacatttga gacttggcag ctacagagct gaggaacctt tctgtgaatt
       61 ttatgattac aaatacacac aatgtgtgtc actgtattag ctttacagta tggcttaacc
      121 agttttttta cttgtatgat ttttttcatt ggcaaacatg agctatgaag gtactattgt
      181 gttgactgcg cacctgtatc ttcacgatga aatatgaaca caaagattaa tattgacaga
      241 catcaaagtg gattgcacaa cagtctcaga ctgcaagaga aatacttaac gtgtattagt
      301 gtgctgtcca agtcgagtac tgcccagtgc aaatacagta ctttccagtg caacctcgga
      361 actactatgc taaatctcct cagtgatctt ttactcccat ctttctcatc atgctgactt
      421 ctctcctctg tctgttcagc agtgggagac atttagcgaa cgctcttcaa gctcacaaac
      481 tctgacccaa tttgattcta acattgcacc agctgatcct gtaagtcaat cacttagctt
      541 gcttgtttga aattaatttt attaacactg aatttccatt cattgtattt agctgttatg
      601 catgattcca tggactgctt tttgggaaat ggtggcaggc ttcttaatta tttttttgct
      661 tattttagga atgcaacttt tctagtacta ctcatgtgta atatatgagt tcaaagaacg
      721 cccttaattt tgatgtaata caactgttac caaaaacctg tattacacaa gctatttaaa
      781 catagtggtt ttttgaaaat gtttataaga ttaataagtc aacataatgg ccaatccctt
      841 ttgtcttca
//
LOCUS       KCKM01003256             829 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51110apa ultra-conserved element locus
            uce-1345, sequence.
ACCESSION   KCKM01003256
VERSION     KCKM01003256.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 829)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 829)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..829
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51110apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>829
                     /note="ultra-conserved element locus uce-1345"
BASE COUNT          284 a          131 c          127 g          287 t
ORIGIN      
        1 tggactgaga aatttatagg catgtttctt cctgtccaat tatttgaaaa gcctcaagtc
       61 aaggattttg cagctttcaa acaatttttt ttaagaaaga aaaatccatt tataatttct
      121 aagaaagcac aagtccatgt agctgtttat aaaactctta tttaatgaaa aagaaaaata
      181 tctttatccc ctgaactaga atacaatata atttgccatt aatttattga atctgatttt
      241 ggacaatgct tctgtagtgt agatgcacgt cccagtatct tatttttatg tataaagaaa
      301 gcaaacaatg aaatctgaaa aacagttgag attatgcttg cataaactct aatttgcaca
      361 gttcacagct actccttgtg cagtaattgc tttatgcggc tgtaatgaat aacctgtgaa
      421 gacagcacat catctaaacc ccattccaaa taatatttct gtgtagtgtt agctgtgaat
      481 ttaccctgta cagctctatc tctataaata taattccatg tattaatagt cacagaaagg
      541 ctgtaagtga gcaactattt ttatgaaacg caccactatg gataaattaa cttttacaga
      601 aatcttgttt actgtatgat attctaaacc actgtcaaat aaaatatata tccaaaaatt
      661 tttttttcca attgtacata gtctgtgtta attttgagtg acaggtttca gtgaaacaat
      721 cccttatgtg catatgagta gagttaacta ccgcattata aaaaatggaa tgttccattt
      781 tgatttctta gtccaaaggg gggtacaatt tatgaatata tgagtaggt
//
LOCUS       KCKM01003257             851 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51126apa ultra-conserved element locus
            uce-4071, sequence.
ACCESSION   KCKM01003257
VERSION     KCKM01003257.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 851)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 851)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..851
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51126apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>851
                     /note="ultra-conserved element locus uce-4071"
BASE COUNT          229 a          183 c          164 g          275 t
ORIGIN      
        1 gaccaacgtt cgtatcccaa aatatttgct gtaaatggca ctaaccttgt ttctgtgcct
       61 tcaaggtcag aagaggacca ggtgctataa tggtctccag cagccaggga ctcccctagc
      121 tttaggacta tcactacagt gatccgtatg gaaaactttc tccttgcata ttaataaaga
      181 aaggtcctcc cttatcctat tgaaaatttc atatgttgta tagtctcaac tctctcgtaa
      241 gccacgtttt ctcctggagt tcactattgt tttgtcagcc cacccatcac aaagcagagg
      301 tcacgtcaac atgacctttt gctggtacaa gcaggctgct aaataattca cgtggccaac
      361 ttgatttcgg ggtccacatt tgttttttcc actctcctaa tcaagatgct catttaattc
      421 tattccagca cctgttcagc aattaacacc ctacaatttg catcttaccc tgacatttgc
      481 tatctttcca attagttttt atatcagtat aattaggtag ggttattaca gtgcatcaag
      541 cagggtcgag gatattccca agcctttaag ctctttccca gatttgttta gggaagccac
      601 taagggtaaa cggttgatta ggatcactgt ttttcttctt tattcagatc aggcgaaaac
      661 tgtttcccca tgtggctcat gaaagatcag ggaaatatgt cagtctgtaa gaactaatat
      721 tatgtagttc gtgacttttt gggtgaattt acaggggatt ataagtaagg gtcaggctat
      781 gtagccactt gcagtagcat tcatgagggg acattacgct cttgctttat attaagctaa
      841 gtaaattgca a
//
LOCUS       KCKM01003258             583 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51142apa ultra-conserved element locus
            uce-6652, sequence.
ACCESSION   KCKM01003258
VERSION     KCKM01003258.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 583)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 583)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..583
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51142apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>583
                     /note="ultra-conserved element locus uce-6652"
BASE COUNT          181 a          103 c          124 g          175 t
ORIGIN      
        1 cacaggagca cctttaacat cctgacgtca ctcatttaaa aaggataaca gacacgggac
       61 ttctctcttt cagctggttt aattagcccg acaggatgcc aggccagacg agatggtgct
      121 tctaggttca ctgtactgta tgcatttctg ataaatggga aaagaataga tgacctggca
      181 gaaggctcag acaataacat gtgatttaca ggacatgaat gcagctacta taagatttat
      241 ctgacagccc tctccgatag tggactgttg agtatccgat ggaatgattt ctagtctgga
      301 aagtctgcta ctgagtagcc atacacatta tttatttatt agatgttttg ggttgaaacc
      361 atttttaaat gatgcacttc acaatgctca gccataaatt tagttttaag ccctggaagg
      421 gaggtagtgt tattggaatg tgtgtcagac tgaattagga tgagcaacac aatgctttta
      481 taaagtggcc ttgaatgcaa cgtcgattct ttcaaaaacg atattaatgt caaataagca
      541 ggaacacttt gcagtaatat taaatgaagg atttctttac att
//
LOCUS       KCKM01003259             671 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51158apa ultra-conserved element locus
            uce-4531, sequence.
ACCESSION   KCKM01003259
VERSION     KCKM01003259.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 671)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 671)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..671
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51158apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>671
                     /note="ultra-conserved element locus uce-4531"
BASE COUNT          177 a          147 c          162 g          185 t
ORIGIN      
        1 gcggccgggc gcgccgggct gcagccggag ccattcatcc cccgcccgct ttgttcgccc
       61 tgagagtaac gccgtgaatt aaaagaaatg acaatatttc gtatctgctc gcccggccag
      121 gagaagggcc cttgagcctg gcaaaaatca ggcggatcat tcatcgtgcc accccgcacc
      181 tgtgggcttg gcattgaaaa ccccgcggac ctcttcctat tcaacttaat tattccccca
      241 aggagcacaa tggttgaaat ggagcaggtt ggagtctgtt tattggtcgt aaatgttttt
      301 ctgaagatct tctgaatctc attgttagct cgttgtttga ggctgccctc tttctttcag
      361 atgagagtag ccttggactt ttcaattttc aatcgtaaca tctgcttaat cgtacggatc
      421 aaaatatgga gacacaaaac atatgtaatg gttgatttgt taaatcctgg taatgagtta
      481 ttaacaaggg aaaacaatag ggcaggatgg tgagagcctt atggtaacag agtcacttta
      541 tgtaacgcct gacgtttccc ttcttgataa atggaactaa ggtctgagcg ccaggtgata
      601 gcaagaaaat caatgtcttt aggggccggc accgagactt tttttctatg tgaaaaatta
      661 ggagacataa a
//
LOCUS       KCKM01003260             945 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51174apa ultra-conserved element locus
            uce-4353, sequence.
ACCESSION   KCKM01003260
VERSION     KCKM01003260.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 945)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 945)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..945
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51174apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>945
                     /note="ultra-conserved element locus uce-4353"
BASE COUNT          292 a          210 c          169 g          274 t
ORIGIN      
        1 gcaactttct ggatccagca gcacatgcta tttggcagaa ctgactgagc aaaattcctg
       61 ttactgaatg caatttccta tttgtatggc tttgtacttt ttagatacgt gccaagtgca
      121 tttcctgcat tttccacaca tgctaacgtg cgagctagaa cttaactcaa gatgggtaaa
      181 acaactctca caaagactag gaagacctta agtgcaaact gctgtaactt gcattttatt
      241 taaatcccct ataaggctga agaaaagtct taggatggag aattagccac cttcaacagt
      301 tctgtttcag cattttatgt tgcaatgtta tcagtcaatt gtcttctaaa atgtcgagat
      361 ataattttga ttaagacata gcaaaaattt catgcaacac ttacaccaga agaatacgta
      421 actattatac ttactagatg agaaccgtct ttaacttctt gaacttgctg cacctgcggt
      481 tcagccacaa ctttagtgtc ctgatcagaa gtcatgagct gtctgctttt tggctgctca
      541 gagagaactt tactggtcac ttttgtaagc tgtggaaata ggaaaacaag agattctgta
      601 agtggttgtt gaaatccctg aaaactcaca gccattccag acaagctacg caaattcaga
      661 cctaaggtcc aaagaacttc cacacaagag aaaacctgac agcagaatgc aaggataaaa
      721 acatcttgca gatgtgctca gctcccagtc tctggctgcc tcacgagtgc aggtgaacac
      781 ttgcaacatc accaggcagg gatattccac tgggaaagtt tcccttgatt ctcaccttaa
      841 ttattcagat tgatgttcaa atcatgactt cttcatacca cccggtagac ttacttatta
      901 agaaaccttt agtcacaaac caacctttgt cttctacaac aactc
//
LOCUS       KCKM01003261            1178 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51190apa ultra-conserved element locus
            uce-1964, sequence.
ACCESSION   KCKM01003261
VERSION     KCKM01003261.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1178)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1178)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1178
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51190apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1178
                     /note="ultra-conserved element locus uce-1964"
BASE COUNT          348 a          213 c          267 g          350 t
ORIGIN      
        1 tggaggaacg cgttcactga agaatggtgt aatgtgtggt aggcagtctc agctgacccc
       61 tgacaaaggc tgttgtgtct ctttttttat gcaatgaaag ctttgatgta ttctgctgtg
      121 aagcacttgt aagattatga ggggaaggag tgatgatcaa tttgaaaaaa aggagcaaca
      181 ttttggctgg acccgtgaca gcacagccgt ttccaccacg gcagcagggt gaataatgca
      241 aaagccatat tccccttgtg tttaatcttg cattgttttt gcggagaaaa tttctacttg
      301 ctttctaagt catgtcatcc tcagttgtca tcccgtctct caaaccatca aaacggtatt
      361 aaatgttgca aagctgtgca gctagagaac tttcaaaagt cagaacccat ttgcagagca
      421 gcccttgtag aaaatgtatt ctgttctcgg cagaattttc cttcagttct ttccactgag
      481 aagtttactg atttctccca gtggaatctg ctggaattta tcggttcatg gttggcagtc
      541 acagattaag gtaaatgtcg atccgtaatg accctctaca tgttagtatt gcagtaaagc
      601 tgggctttta tgtcaaagat atcggagagg gagctattac acatgacagg ggtgatcaag
      661 ggactccaga ccaaggcaag cattattaaa tattgactag ttctgtgatt tatgtagagc
      721 tggaggaaaa aagtgacttt ttaaccatta tatattcttc agcaacgaaa accagccatt
      781 tatctcctgc tggtaataaa gaacagagtg cctgcatatt ttagtggagg gaaaacctgg
      841 ccttataaat gagatggact ctttcatgat aacatttcag tttgctaatt gccaaaagca
      901 aaacaggcaa attggaagca attataagag ttgacttaaa gtgcctgcta tgttagttca
      961 actcaggaga gccgggtggt ggtgaaggaa tcattgggga atggaaccca gaaaatttca
     1021 ttacatttgt tcactgttgc tgaaactttg ctttgcaatg ctaaataaat agtgtttccc
     1081 ctcagaagtc agagcactag caactgacat ttatgctggc tgttttgggg gtatgcagga
     1141 aggaaattaa gcattaattc atcaaactta tataagac
//
LOCUS       KCKM01003262             864 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51204apa ultra-conserved element locus
            uce-1533, sequence.
ACCESSION   KCKM01003262
VERSION     KCKM01003262.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 864)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 864)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..864
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51204apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>864
                     /note="ultra-conserved element locus uce-1533"
BASE COUNT          273 a          181 c          164 g          246 t
ORIGIN      
        1 ttaaatgtgg taacacaaca gcctctcctt aacatttcaa tttaaaagct cactattagg
       61 ttctgttgtt acaaaataat tccaacttca aaataccatt tccctgaatt agagcaagga
      121 ggtacaaaat gttattgcaa atctcactct gctgggtaag aaaaagagct ggacctgcta
      181 tggagaccat cgggcagccg agcaaagata aaggtgcata taggatctcg cctttagata
      241 ccttggggct agcgaactat ttgttactat aggaaattat acagctctag atcactgcct
      301 attgagatcc gctacttgca gctttttgct acaacatgaa tggcttatta aacctacaac
      361 atatctgttt tagttaactt cctggtggag aggggccagg aaaacaaaat gtacttaaat
      421 gctgaatttt tttttccagg ctgaatgcct ttcatccaat aagacattca aagcagtgac
      481 ccagcaaatg gattgaaaaa gcaatcttcc gtctcagtgc cgcattatca ttcctattca
      541 gtattctcgg tgagatatct caatcagctg gatgtgtgtg taagtgacag cgcagcccat
      601 tgctgggtta attaaacatt tgactttaac accctccccg tcattaagca aataaaaaca
      661 gataattcaa actgcacttc atccacgggg tacacaacat acatgtcaaa attaagagag
      721 tccaaggccc tcagggagtt ctactcgggg aggtaatcag tttaaatctt atctggttta
      781 tcaattattc tattgattaa agcagggtga ttatacaaaa ctccctcttg ccacatggga
      841 tacatgtcag cagagcagga caac
//
LOCUS       KCKM01003263             754 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51219apa ultra-conserved element locus
            uce-5736, sequence.
ACCESSION   KCKM01003263
VERSION     KCKM01003263.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 754)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 754)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..754
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51219apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>754
                     /note="ultra-conserved element locus uce-5736"
BASE COUNT          206 a          149 c          145 g          254 t
ORIGIN      
        1 tctgtacgta cctgaacttc tcaggaaagg ctaatccact ttgaaattga tgccaaattg
       61 gcaaaataat tcgttccttc tgaactcaaa ctctttagtt taggcacaca gggaatatga
      121 gaaagcaacc tttttctaaa atgcaaacaa gaaggaaaaa ccttccctac catccagtat
      181 agagtacatc tcttggctgg atgagtgtga aacatattct gaagcgtgat agcgtgcatg
      241 gatgtggtgt gctacttttt ttcagtaatg aattttatgc ctgcctgttt ctgtttcttt
      301 gtctattttt aattcaaata tgtaaaagct tttcttaata cagactccca ggtgtcagtt
      361 gctgcctgga gtcccttttc tttcctccat tgttctctta attgttactt caaaacaatt
      421 agctgggcat tcatatgcaa atgaatgcaa atgtacaggg gattgggtgt gagagaatac
      481 caccactcgt taatttccac ttcaaggtct gctggcagga acaacaaaat tgcttaacaa
      541 tgtatatttc ctgggccata aagggtgaac ttgcgatgat tccagccgtc ctgctggctt
      601 ggcagttgtt aagattctgc tatttcttgg taggatattt atttattaat ttatttattt
      661 gggtctagag attgtgctag ccttgtcacc ctaaaccgcc cttgctcatt catgctcaag
      721 gacataccta ataatttgga tacaatcctg atga
//
LOCUS       KCKM01003264             478 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51234apa ultra-conserved element locus
            uce-2289, sequence.
ACCESSION   KCKM01003264
VERSION     KCKM01003264.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 478)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 478)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51234apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>478
                     /note="ultra-conserved element locus uce-2289"
BASE COUNT          148 a           90 c          111 g          129 t
ORIGIN      
        1 gaaaaaagta tgacatccag gatatgagag attcactgag atgtccctgt ccttaatgag
       61 aaatcacaag gaagattact accacggctt gcctatacgc tctgacttat ctgttggtct
      121 gggagtttag gctcctgcga tattgaatga agattataag ccagatgggc cacaaattct
      181 gtcaagcctt cttggcagct gctctcatta caaaagccag ccagcctttt ccaaaaataa
      241 gaatgtgaag caaattgggc ttatagaccc ttataatgca attgcacgca gagatgggga
      301 cctgagcggg caggcagaaa tattattgat ggctgctgaa aaaagggaat aagatgttat
      361 taagccaagt cagagataga tatcgatagc taatataaag cctttattgg tttacaggct
      421 ccaggaaaga gggttcagag cttcgaccct ttgctttgct tttaatttca ctggagat
//
LOCUS       KCKM01003265             588 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51250apa ultra-conserved element locus
            uce-2336, sequence.
ACCESSION   KCKM01003265
VERSION     KCKM01003265.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 588)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 588)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51250apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>588
                     /note="ultra-conserved element locus uce-2336"
BASE COUNT          170 a          127 c          153 g          138 t
ORIGIN      
        1 ggcaggacca agcacggagc aggtctgggt tttagctagc aacacaggtc aggttgggga
       61 aggagtctgc acaagcaggg tttgaagagc gatttgggtg aggaaaggtc ccaggggtca
      121 cagcaggctc tttgggaaga ccctgaccat gcagctcacg cctaggagta caccggctgc
      181 ccagaaaacg agaagaggcc taagagccag gacaactttt ctgccatcag ttgcacaaaa
      241 aatcaacaaa aaaagtaaca gcaataactg ggaggatctg aaagaggttc tttgctgtcc
      301 ccccagctcc cctccctttt ttatttgcct gagtgacaga ggatttaaat gcaaagtgga
      361 tctaatgcac accctgaagt cggctggcag tatgcaaatg acctgtcaga ttaaaatctg
      421 aatgaaagag ataacaagct tatcttcata acaaaagact cttacaggca aactatttga
      481 cgcagtgttg atgtttgttt taacccgtgg actttggaca gtgcaatatt tcaggggctg
      541 tgctcctctc cgtgtgtatg tgtatgtgtt tgcactgcca acaaaagg
//
LOCUS       KCKM01003266            1002 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51265apa ultra-conserved element locus
            uce-1052, sequence.
ACCESSION   KCKM01003266
VERSION     KCKM01003266.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1002)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1002)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1002
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51265apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1002
                     /note="ultra-conserved element locus uce-1052"
BASE COUNT          292 a          203 c          183 g          324 t
ORIGIN      
        1 attcgggccc gtgcaagtaa ttctgcctga gatctcggcc ggcgtaatgc aaaggcatca
       61 tctcctcata atttctgagc actaatataa acagatttct gtctgaacgt cttaatgcaa
      121 atatactgcg gttgtctagt ggaaaacagc actgtaatga cttccactat taaatttgtg
      181 ttgcatctga aaaggcaatg actgcatatg aagcactaac cctggttcat tgtttctctc
      241 atctctcaga acatcccctt tctggatcct ttatttatca agattaatca ctgtaggcat
      301 cactttttgt gcatgccata cgttcatagg aacagcactt aatccagaaa gttgccggat
      361 ggatggctct tacaatgggc atttacctct gaaattggtg tctatgcttg atgttgcatg
      421 catctagttt gcatacaaat aaagaattat acttgtcatg aagcaggtat aatcaatgaa
      481 aggcacagct gtcttaatca ggtttcgtta gcccgagcag ctctctgtga gcaagataaa
      541 gtgtttttca gaggtgttaa taattactca taatctctcc tatcatatcg caagactttt
      601 tacatgcctt tcaattttaa gcaacgatta aagcaattaa gattgctgca tttacaagct
      661 atttttcatt cccagaaaat atcctacacc tacttgtcca tatggtactt tgcaattgga
      721 acataaggat agtttaggaa aattacgtat gctcttatcc ctaatctgcc tattactgga
      781 tagtatctta actaatgaac ctgactttca aagctgctct taagtggtgg tcttgtcata
      841 tcagagagac acaaaatgtg taacccaatc agtcaaggat gctttgaaca agtttgtttt
      901 gttacaatat gcctagctta tgcgtactgc ctcatgctgt gaatacgatt agcgccgaat
      961 ggtgtttgaa aagcatttca atggaaattt cttagccaca ac
//
LOCUS       KCKM01003267             658 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51281apa ultra-conserved element locus
            uce-3377, sequence.
ACCESSION   KCKM01003267
VERSION     KCKM01003267.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 658)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 658)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..658
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51281apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>658
                     /note="ultra-conserved element locus uce-3377"
BASE COUNT          218 a          132 c          134 g          174 t
ORIGIN      
        1 gccgtgctgt gagtatttca ctgtgctttt caaagcagct ataaaacata ggaagggctt
       61 aaggggaaaa gattctgctc ccaccgtaaa tcaaaagtga gcagacaaag gtcaaaatac
      121 caaaagccac aagaacatta acacttagga tataaagatt tcctaacaaa ctaatgcttg
      181 ctctctcccc agataaagca gacaccttat ctttgggagt ttacaaaatg gagccaagct
      241 atacgagtaa ccacttaact aaaccaaggc ctggatcttt tagcagtctg cagtcattaa
      301 agctctcgga aagtctccca ggagccaata tgcttgctta agtatatgct gtaaaaggtc
      361 cctgagattt acaaggaact gctccatgct aagctaggca ccatctgata aacaagcaat
      421 tttagcttca ggctaaacga tgctctttga ggctttgatt tacaacgctg cagatgatat
      481 atttgtagtt ctaggatagg ttctgctgtg gacctgctgt gattactcat ccatgaccca
      541 agttagggct cagatcttca actaggaggt cagaaaattg ccagtggagc aggaaatgtt
      601 tgataaggtt tatttagatg ctaaccacat taaaaaaata ttaaattaag caaacagg
//
LOCUS       KCKM01003268             729 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51296apa ultra-conserved element locus
            uce-5042, sequence.
ACCESSION   KCKM01003268
VERSION     KCKM01003268.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 729)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 729)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..729
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51296apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>729
                     /note="ultra-conserved element locus uce-5042"
BASE COUNT          215 a          149 c          163 g          202 t
ORIGIN      
        1 gggagcgggc ttcctcccca ggagggtggg aaaaactcga caagcagccg ttgaaataaa
       61 caccagaaaa attaaagcta cggtgaaatc ttagcggaaa tatctttgtg ctcttaggca
      121 tataaatgag acttttctat ctgtgtgcac aagcagagca ctatttatgt ttacgtgaag
      181 tacgaaaacc aaatttgaaa agcagcagag gtaccgatgg caatatttca ctctgataag
      241 ctttcccttc gcttggaatg tgctggatcc gtctggtgcg agaagccttg aaacaagtaa
      301 ttgagtttag atgatctgcg atcactcttt aggaaacccc acgagccgct tttttttcat
      361 gcaagcctta gaggaaccct gccaggtccg ccttttgttt tgcagttctc tgtcagaaat
      421 gaagtaatgg ctaccagtca cgtcacagat gaatggatga cacaaatgga aatgagcagc
      481 ctgaacagtt acattgtgcg ccgttacata gcaaccccca atggggtgct ccgaatttac
      541 cccggttccc tcatggacaa agcatttgat cccaccagga gacaatggtg agtttttaag
      601 gtcctgttat caaagctttg agtaatctta gagggcaata aggaaaatat ttggtataaa
      661 tctcacagtc tgtttttttt gtggccagct ataaactatt taactagaaa tattttcagc
      721 atggattaa
//
LOCUS       KCKM01003269             475 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51310apa ultra-conserved element locus
            uce-1161, sequence.
ACCESSION   KCKM01003269
VERSION     KCKM01003269.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 475)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 475)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51310apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>475
                     /note="ultra-conserved element locus uce-1161"
BASE COUNT          158 a           89 c           86 g          142 t
ORIGIN      
        1 gacacacaaa caagtgacct tgactgacaa gcgcacttca tcccagcaat aaacagcggc
       61 ggggctgata agtgttcatt ggcgcagaga gtaattacct atctgtcagc gttgctggtg
      121 tgtgcgaaat agtataaatg aaacatacat aatgtacagc aataatatcg ggcatgcaga
      181 acctaatgca ttatcatcat tctcagggct caggtttatg tggctgccac cactgagtaa
      241 atgccttcta gccatgataa tttcattcta atctctgttc catattataa ttttcatagc
      301 taaaagatac tgaggagcaa tacgtttcaa tcaagggcta aatagaacac aacctgtaac
      361 tgggtatttt atacacctat atatattttt tttctttcaa aaaaaattta gtcaatttat
      421 gaatagactg aaataagctg taaatttatg gatgacaaac tctgtctgta gcaat
//
LOCUS       KCKM01003270             246 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51326apa ultra-conserved element locus
            uce-7056, sequence.
ACCESSION   KCKM01003270
VERSION     KCKM01003270.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 246)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 246)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51326apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>246
                     /note="ultra-conserved element locus uce-7056"
BASE COUNT           78 a           55 c           41 g           72 t
ORIGIN      
        1 tgacgtttct gtgacagctt gaaaacttgt ctcctacctc tgagctgagc cctttctgcc
       61 ttgtcctcca tctgccatct cattttaaaa ctagcagaac aactcgagtg aagcaatttc
      121 gactttttcc atctgtgcac agttaattaa gagggtaatg agagctccga atgaacaagc
      181 cctgcattaa ttcaagatat gattaaggaa aacatccaaa aataaaaaat atatatgtgc
      241 ctacat
//
LOCUS       KCKM01003271            1061 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51342apa ultra-conserved element locus
            uce-5012, sequence.
ACCESSION   KCKM01003271
VERSION     KCKM01003271.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1061)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1061)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1061
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51342apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1061
                     /note="ultra-conserved element locus uce-5012"
BASE COUNT          318 a          183 c          203 g          357 t
ORIGIN      
        1 atatattctt catatatgac aatgtaaatt aaaatttatg ggaaagtagc tcactttaat
       61 caggatctta ctataatttt ctgttaaaaa tactatcaaa tgaaaataat cttaggaaac
      121 atttttgaga ggccaggttt aacttctgtt gctccctttg agtactctat tcaattccat
      181 ttctggaata aggtactgct tctgctggac caaaaaaatt attatatatg gaattagtat
      241 ttatgagcta tatcctttta ttgaataacc gaagacaaaa gatgtattca atgcatttcc
      301 aaagaccttt taaatggctc aacaaagcac ataatacagg ccttgtctta catgtctgtg
      361 atgatacagt ttaatagtgt tataaggcta tggtggtgtg tagttgttgt gatggtagat
      421 tgtgctggtc tgtatagatt tactgtcatt ctttaggctt ttcatacatg acagaggttg
      481 tctgaagcac agcaggaaca tgaagcttgc aggggttaag tgttacttgc ctcctggctc
      541 gctacatagt cctctctgca cacatacaca gatgaggtgc agggtacatc cgtcaccggg
      601 ccgatgacat gatggattac tcatgtcatt gtcagtacag tcaaaatcac tctgctgccg
      661 ataaggtggt cccttttctt tactctggtt gagtgaagct atttttccct ctggttttga
      721 aattgtagct ctcacaaaca tcgtttaaat caaagatgga aaagactgtt tttaatttta
      781 catagtagct tcgggccata ggaaacaaat ttctttgaaa attattttca aaatggacag
      841 atgcatattt aatattttac atcacttgat ttcttccaaa tccgaaaata aaatacttta
      901 agagggacac tgaatatttt cctgaactct ttattcctca cgatttatca gagagacagg
      961 cttggttttg aactgctaca ttgcttcctg agtcgtcttc tctgtagggt acaagcactg
     1021 gaagagagta aggcactgga aaatggcaag gctttgaaaa t
//
LOCUS       KCKM01003272            1103 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51357apa ultra-conserved element locus
            uce-4523, sequence.
ACCESSION   KCKM01003272
VERSION     KCKM01003272.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1103)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1103)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1103
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51357apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1103
                     /note="ultra-conserved element locus uce-4523"
BASE COUNT          332 a          197 c          202 g          372 t
ORIGIN      
        1 ataaaggcat cctgtgttct gcaccaatac ctgagggagt acccacagtt accttttgag
       61 gtctttttcc ctaaactcta aaccaagccc taatcacaag tgcatcatct gatgcagcac
      121 ctaacacatt ttgatatata tcctgggtat aatttacatt gaaaaagaat ggattgatat
      181 ttgagtttta tcagtttggc tccaattccc tgaaacgtaa agtttttcag aacatcagtc
      241 taagtaaaga acacactcga gtgcaaaaca gatttcttgg aagaagagtt gaaaaaaact
      301 gaatgtaagt tttgggttgg cataatccag gttaaatcta aaaaagaaaa atacttactt
      361 gtgtaaaatg agaggctatt ttatcactca gagaatgtca catcaattgt aaagccatca
      421 gcctcaaggc ttgttggtga ttgcttcata tttactgtta gtccagcaat ggagatggta
      481 cttttacagt ctttggacag actagtgagt gtgacattta aagtgttgat ttttgcagca
      541 cttatgttaa ttgttgtaat tttcctgatg aaccaccatt ctggttccct gatgcagcca
      601 agatagtttt acattttcta tgcaggcctc tttgccattt ggtctgtgta gtgtcagctt
      661 cgagtgctac tgaaagcaga caaaattgca agcaaattgc atcagattgc caacattgtg
      721 aaaaggtaaa ttgcttgcaa atctatttaa accactgccc tattttcatc agcttcagta
      781 cttggtattc atgattgctt aattggcgac ctttcctatt gtgtagtgct ttatggtgta
      841 atggaaagcg atctttacca aaccaattac cctttttttc tcagcactac attattgctg
      901 tgattgcaac tgccagtcct ttgtaaatga actttctgat ttcaatgatg tttttaaaat
      961 gtaagataga aaaaagtggc attcatattg tgtgatgttc tattttgaag cctctttgta
     1021 gtcaccattg tctgggaaaa tggactgaag ggttacacag tacctacaaa tatccatgta
     1081 actattatta atattatcat aat
//
LOCUS       KCKM01003273             701 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51373apa ultra-conserved element locus
            uce-3695, sequence.
ACCESSION   KCKM01003273
VERSION     KCKM01003273.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 701)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 701)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..701
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51373apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>701
                     /note="ultra-conserved element locus uce-3695"
BASE COUNT          249 a           99 c          118 g          235 t
ORIGIN      
        1 ctgttaagat gaacttcaga aatgatgtaa aactattctg actgtggttt cctgattttt
       61 aaggcaggtt ttcattagaa tgcctccaaa ctaggcaaaa taccatagtt agtgttggtg
      121 ccaaaccaaa atatgaaggt tttgattatt caactgagtg atattattga gcaaagcaaa
      181 tctataatct gagtaaatat tacacagtat tattaaaaaa gcttttaaaa agaaagcaaa
      241 aagaattgta ctagacttaa ttaagacttc aagtaaagct tgcttttatt ggcaattttt
      301 ttgttgcaat aagaaaacta aaaattaaga ggatggttgg cagcaatatt gatatgctaa
      361 tggataaaca tgctaattta gaaaaaaact aatcagcaaa gacattacta atggaaatgt
      421 actggaaaat ggctaatgct gtatgcagac ctgatatcta caaaattaag aataacttat
      481 tctgtggtta aaattgtaag tttaaagcta agccttgatc ttttctctgc tttactttgt
      541 ctggtattaa aatatatttc agatgacctg gcctggtacc atgacacctg tttagcttct
      601 tgtaattatg ccgcttaaat tacatgttct gtttactgaa aagagagcta aaattcttac
      661 attttttcta tctaatttac cagtgtctgc agacacagag a
//
LOCUS       KCKM01003274             594 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51388apa ultra-conserved element locus
            uce-4039, sequence.
ACCESSION   KCKM01003274
VERSION     KCKM01003274.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 594)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 594)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51388apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>594
                     /note="ultra-conserved element locus uce-4039"
BASE COUNT          190 a          106 c           94 g          204 t
ORIGIN      
        1 gtgcctgttg ctaaaagact ctttcatcac tcttacattt aaacaacagt agtttttaaa
       61 taagtctgat gtgcagtaag gagatgataa agtgctaaga atgacttcta aaatagtatt
      121 tgaggcacat ttcgcattga tgtgtgttgc tgcaatttgg gtcaggctcc tttgctctta
      181 gttgctagcg ggatgatggg cagaccattg cattcacttt caaacacaac actgatagct
      241 ggatttacat ttctttttaa gactcagctt ttgcaaacaa gctttagatt tcagacataa
      301 ttctgttatt caaatgggag aagagtttga tagctatgct aatcactttt atctgagaaa
      361 acataactaa tagcttggtt tacatttgcc tgcatttatg agcataattt tagcacataa
      421 ttttattgcg ctataaaaca taatactgca ttagtccgct cttaaaaaaa agttacctta
      481 gagtgatttg cacttaaacc ttcacactac atttaaataa cagtatcatt taaaaatttt
      541 gacctttcaa accactcatt caacaattaa acctacaagg ctattttctc taga
//
LOCUS       KCKM01003275             744 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51403apa ultra-conserved element locus
            uce-1193, sequence.
ACCESSION   KCKM01003275
VERSION     KCKM01003275.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 744)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 744)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..744
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51403apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>744
                     /note="ultra-conserved element locus uce-1193"
BASE COUNT          217 a          133 c          145 g          249 t
ORIGIN      
        1 aaaattaggg tgggagcaac aagccttcct ccataatagt gttttctcca tttcaagctg
       61 atcagtagga agtggattta gaagtgcttt gaattatttc acatcattta ccggtaatct
      121 aaccagcatg tactgtgtgt accctaagtg ctgatttttt tttaaaagca taagaggaag
      181 agcaaaagaa ctttttattc taagtcattc tgtaatttac acatttttgt atcaacccac
      241 ttactagtgc catacataag tgtttcctct gaacagattt aatttttaat tttcctgaat
      301 cagtgttaac caggaaaaag gtaattgttg tcaagagtat tcaaactgtc agaatatcat
      361 tcaatctaaa agctgttaga atctgtgcaa aagtaattac tgaaactcta ttcaactgta
      421 ataataacct gccactgatg acagcaatta ctggggaaag tgtaatagaa atcaaaggcg
      481 catttttctc tgacaagtac atttctaact aaggtttaca ttggctgaat agtgttgaca
      541 atgatgatgt gctgtatcac tcttaatcac ggttggcatg atgttacggt tcgaaccgct
      601 cgctgttcga ggaggactaa ttgcgtgttt catttgacac tggccacgct ttctgtgcgc
      661 gggcatctat attctagatg agcagggttt aagtgttgtg cctcactgcc tgactctcat
      721 cctttttaag tgtaggttac tagt
//
LOCUS       KCKM01003276             941 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51419apa ultra-conserved element locus
            uce-4436, sequence.
ACCESSION   KCKM01003276
VERSION     KCKM01003276.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 941)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 941)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..941
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51419apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>941
                     /note="ultra-conserved element locus uce-4436"
BASE COUNT          312 a          160 c          211 g          258 t
ORIGIN      
        1 acttcctcag gcacagctta gtcccccctg catgagatgg tggtatatat gccttgcttt
       61 gtgtgccaat acttgactgt caagagaaga gcatttccag caaatgcact ctactaagaa
      121 tttttttctc tgtggtttca tctctgttta ataaacattt ttgtttgaat gagaaagcaa
      181 atgaatcctg ccactttctt cctttctgca tcactacttg gaacagaatg tgggctaagg
      241 ataaaagtgc tgcagaagca ccttttggaa atattgacag caaatgcttg gtaagaagtg
      301 agctcataca tggcatgctg ttatgtttct gaatagtggt tagactgggc ttttcttgag
      361 tgaatttaag agatttaaga aatacagaaa tgtataaaaa agaatactcg tttacctgat
      421 tgttacaagc aacaatgatg tgctctggtt ctggcattac actgcttttc tgggccacaa
      481 gggtatcttt ggtatgtcct ggaagacgat aggaagaaaa gagtccatag tattgcttca
      541 tacagagagg atgaccagac agctgtccac gagcaaaatc aacaggtaaa gcatggctgg
      601 agaaagagaa ggagaaaaac aaagccagag gaaaagaggg gagagagaga cagaaaggaa
      661 atctaatctg tcctttgttc tgttacaatt agatcaggta taacataaat tgaataataa
      721 aatgagatta cagtataagg gaaatagatt aattcccata ccaaagttaa atacatcatt
      781 cctggcagct tcatgcatat tcattaagca attgcattat catctagtgg aaatggaaag
      841 aatagcaggt cacaagcagc tttgcaatgt gcatgggaag cttgcttagg ttggaccccg
      901 gaaacttgcc aggacagaag ttaacagaac agctggaaaa g
//
LOCUS       KCKM01003277             673 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51434apa ultra-conserved element locus
            uce-2031, sequence.
ACCESSION   KCKM01003277
VERSION     KCKM01003277.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 673)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 673)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..673
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51434apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>673
                     /note="ultra-conserved element locus uce-2031"
BASE COUNT          187 a          178 c          141 g          167 t
ORIGIN      
        1 gtcttacctg catgctgaat ctccactgaa agctggtgag attaactgaa ctttgggagc
       61 tttccatgag cctacaaacc tccccaaacc ctgcgagctg caaccagagc ctcttcagga
      121 tggggaggga caactgctgg gattcagata tcctccagac ttaagaaaat ggaacaaaga
      181 aactttattt ttgaaaaaga gacaatagat ccggatgcga gacgaatata tatatatagc
      241 tattgccact gtaacagcag ctaagtgaat gcatgtctgc agtgtgagca gttttgataa
      301 acagcctctg cgggccacac aacggggata atgtatcctt aagtactgcc aatgagctgc
      361 cattctgcac agccaattac ttctgtgcgt ctgtcactca aaggaaaaat gactgagccc
      421 attagatcaa acctttgtca ctgttcctaa tgcactctta ggcctcatta atctgaggga
      481 gcagcaacac agccgccggt gcctcattgc ctcccccaca acaggcccac gtgaatcttc
      541 tcatctctcc cccaagtgca ccacgttaat caagctctcc ttattacccc ggtccctgtc
      601 acggcggaga gcgctctctc tcttaaatgc tctcattatg gtccatcttt agagctggct
      661 gagtggaaaa aaa
//
LOCUS       KCKM01003278             669 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51450apa ultra-conserved element locus
            uce-2478, sequence.
ACCESSION   KCKM01003278
VERSION     KCKM01003278.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 669)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 669)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..669
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51450apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>669
                     /note="ultra-conserved element locus uce-2478"
BASE COUNT          231 a          127 c          119 g          192 t
ORIGIN      
        1 tatatataca catatacagg aagaattaac ttagaaagaa tgattagtaa tacaaaccaa
       61 cccttggctc attgagtgaa aaagaaatca tcatgcaaac catcagcaag caaaggtcag
      121 aggtcgttag aggctcagaa aaggggtttc ccacattgtc cctgcagcag agtcacagtt
      181 tccaatgatc acttttgtga ctatgcaact gggctcatat tactagctgc aacatcacaa
      241 aaatgacact ggcaaccgct aattagctgg caaaataaga atttgtccat ttttaaagtg
      301 agcagtgtta gtaaatgcca ttgcacacag cgagaagtga tagcataata gatatatatt
      361 ttaagcaaag ccctcacatg tgatgctaat tatcttttag cttagcagtc cctctttaaa
      421 gtgtaaatgt gctccctctg ggctcaagaa atatttaatt acacatatca gtgcatgact
      481 aacaagctag tccagagcaa taatgattgg tctattgttc aaaatgaaat taggactcca
      541 gaagcattta aaactgacca gtggtttctg tagtagcctc acctctcagg gactgtcttt
      601 tgtacagatt ttcaaaatat acagaataat ctctttttgg caatttatac ctacattatg
      661 aaagtataa
//
LOCUS       KCKM01003279             910 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51465apa ultra-conserved element locus
            uce-1558, sequence.
ACCESSION   KCKM01003279
VERSION     KCKM01003279.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 910)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 910)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..910
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51465apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>910
                     /note="ultra-conserved element locus uce-1558"
BASE COUNT          281 a          174 c          183 g          272 t
ORIGIN      
        1 atgtagttat atatatatgt agttatgcac tataaaaatt agagtacaaa tatctacata
       61 tgctgtcagt tttagacaca ttaatctaag gctctgaaaa tattccatat gtgagcattc
      121 tacttttaga tccatagtat ttataattac taaggctggc ttttgcatcg cacatgagag
      181 tttggggttt ttttctgtta aaaaaaagac aataactgta aatctgtttc ctcataaagc
      241 agtcctttat gagacatgca aggaaatgca gtgtggattg tcatgaacag agcaataatc
      301 acaaaattag aaacaaagga attagacagt acaaagcttt tttttctttt ttaaagattc
      361 taaatcacac acaaaacatt tgttctgctc cagctctttg tgaactaatt ggctctcctg
      421 gagggacagg taattgtact tgactacaca agctgtcctg aagctccctt ggaaagctcc
      481 agtaagcttc cagtgttagc agccatcaag gatttcacag gtcaggcatc agatcgatac
      541 agctaaaagc agcagggact gtaatgtcga cagcaggttt cagaaaatgc tgcaagtgcc
      601 agtttgttcc ccttcatgca gaagctcaag acagcttaat taacccttgg aaaatacaat
      661 ttatccagag gctctgcagg tctctactag gccttattgg tgaactgata gcagagatac
      721 tgtagctgac agatctgaat tcccatttcc ccctttaatg ctgtttcagt taggatgcaa
      781 acaaaacatg attttaggtg gatacatttg ccttgtcctg aagagcatgc tacaggaggc
      841 caccaaggca gctgatttgt tagaacttgc ttgtgatttc agcaggagca tggcccagca
      901 ggtgcattga
//
LOCUS       KCKM01003280             968 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51480apa ultra-conserved element locus
            uce-7610, sequence.
ACCESSION   KCKM01003280
VERSION     KCKM01003280.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 968)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 968)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..968
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51480apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>968
                     /note="ultra-conserved element locus uce-7610"
BASE COUNT          285 a          178 c          220 g          285 t
ORIGIN      
        1 agaatccaca aagaatgctg cttcagctct gctctgattt ctaattagat tatgagtgat
       61 gtaggactct gaagccaagc tggagtttgt gctagcactt tgcatgtatg aatgacaaag
      121 ggacaccact ttcatattga tttaagcaag tcagtggaag aatgtttaaa catcaagtgc
      181 ttgatgcctc agtttgccag agcacctgga aatatcagat taattccagg tgttctgcca
      241 ttaaggcagg cttgttgctt ttacagccac acacaaaaaa tgtggctccc agttccacaa
      301 ataaaaactg agtggtttct gctcctaatg cctcgataac tctgacatat tgcaagttct
      361 ggaaagaatt ttaatctaca taggaaaatg gggaggggag cgagggagga gggattttaa
      421 atatgctgca tacaatttgt gatggtcatc tctaaaatgc agctccatta tccttttcca
      481 tttggaatga atgaggctaa ttaatttcag gccatacttg atgaggtcag caccatacga
      541 agggtgcgtg ctagacattg ctaatctctt tcagctgaga gtgatgaatt aaagatgaag
      601 cattcctttg caggcctaat ttagaatgta tatcaaaaac ctacagcaaa taatactata
      661 ccctacaaca aaggaaaact tgttctctca ggctcccatg tagggttgat tttaaaggca
      721 ttttcatttc actttggaat tccagctgtg gatgggtgaa acagttcaga aaattcaagc
      781 tttctctctt tctattgctt ttatggacaa aagtaggcaa ggaggggggg agtaaaggga
      841 gagagaaact agtcagtgtt tgatcctgtg attctgactg cacgctcaac atttaggaga
      901 gctgccaggg tcttgtgctc cccaggtacc tgtgacgtga tatggtgcat actgaaattt
      961 tactgttg
//
LOCUS       KCKM01003281            1016 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51496apa ultra-conserved element locus
            uce-1601, sequence.
ACCESSION   KCKM01003281
VERSION     KCKM01003281.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1016)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1016)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1016
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51496apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1016
                     /note="ultra-conserved element locus uce-1601"
BASE COUNT          240 a          253 c          225 g          298 t
ORIGIN      
        1 gaacaaggat ggcagcactg ggtgcatgag tacagggacc ctgaaaaacg aatccctgaa
       61 acctctgccc agagtttgct ggatcttgtc ctcatccaag gaaaatcaga gtaacagaaa
      121 tacagtaaaa tgactgcaaa atgtatctgt tttcaactct cagtgcccag gcctttgatg
      181 catcacatca gtaaggtaga ttttacttgc aaaatggctt ggactctagt ccctgttttc
      241 cacagggcat gcacgtgttt ggtccagagc tggtaacatc tctctcatgg tgggtgtaca
      301 caccctgtgt ccctttgcac tctccccatc ctcagggtgc tgggtcaggc agtgagagcg
      361 cacaggttgc tgcaagcttt gtgccgacag tgtttctggt gcagtgtgtg tcctctcctc
      421 ttactccagc tctcggtttt accatgctat taagttattg ccacccctta gggacaagcc
      481 ttcgagaagg cggagggctc acataactct ggatcagtaa aggaagcagc tcaattagca
      541 tttcacacgc cttttcttcc ctctcttctt accttccctg cagcgggcat gctttcccct
      601 taaaggattg tcctgtttct gctccttgcc agcgttggca gggtgacagt agtcgagtgt
      661 gcaaacttgt gctattgtcc ccaggccagg gggagtcatg gagacccact aatatgacac
      721 aggaaaatgt ttgctgatgg caattctatg ggctttgtct aactctttct ccatcatgac
      781 gactcgattt aagtctctaa ctgtttgact acagatgcaa gagtactatc caactccatc
      841 cttttgtccg ggtagtttga atgggtaatt cagcttttgt gtaactcaat tgagggggca
      901 aacataaaga caagattctt gagcgctcaa gctccctttc catggatatc tgcacatctc
      961 tttagagatt tgttcctttc ctaccttttt ctgacatcat tctaccctta aaaaaa
//
LOCUS       KCKM01003282             354 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51512apa ultra-conserved element locus
            uce-2599, sequence.
ACCESSION   KCKM01003282
VERSION     KCKM01003282.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 354)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 354)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51512apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>354
                     /note="ultra-conserved element locus uce-2599"
BASE COUNT          128 a           74 c           61 g           91 t
ORIGIN      
        1 atattatcca tacataccat gatgcatttc aataattatt ctacaataca atgggagtgc
       61 atgctcaaac aaaacacctc agcagtattt taaagcagca aaccacccag ccaatttctg
      121 tacgttcagt ttttctaatc cactctccct gtggttgagc aaaatcgaat tgcctctcac
      181 atttgcagac agctctgtga aggtgataat agagctgctc cctgctgtca tgaggcagga
      241 aataggaaaa tggcatatgg ggctagaaag aaataaaaag agaactaaac aagaacaaaa
      301 gagatttcaa caaaggacaa ctataaccca atatgctttg caagttaatc tctt
//
LOCUS       KCKM01003283            1286 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51527apa ultra-conserved element locus
            uce-61, sequence.
ACCESSION   KCKM01003283
VERSION     KCKM01003283.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1286)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1286)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1286
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51527apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1286
                     /note="ultra-conserved element locus uce-61"
BASE COUNT          416 a          278 c          207 g          385 t
ORIGIN      
        1 tgaatgtaac tgttgaggac tagtgattac tcagaacttt taatattttc agactaactt
       61 ttacttttgt aaataaataa aaatgatctc tagagcaata tgttggccct ttaaggtaca
      121 gaaacagaaa ataaactcat atttactaat atttccaccg cagattacaa aagcaaactt
      181 ttcagtatag ccatgtgttt ctccccccat ccttttcaga gctctcgtta tttttttttc
      241 ccccctaaag tatctgatca gagattgtcc ggtaagagca ctttattaga tcatcagtca
      301 gagggtttta caagcaccga gagctatggg ctcaaatgca gcacatcagt tttaatagcc
      361 gaaggtctaa tagtaaactg cagatactgc tgagaacttt ccatgcactg aactcttgaa
      421 aaagcaccat ctctcaagct taaatgcagc tgcctctttc aatgccgcaa atgggtaaat
      481 ttgacaaaaa agccaccatt aagactacat gaaaggctca agacaacatc ctttcaatgc
      541 tttgtacttc agtaatcaga tgtacttact caccccctcc cccaaacccg atcaagaact
      601 atttctgaat ggtaggaaat aattccactt tgtacatctt ttagttaatc aagactttct
      661 attcagcaat ttgacctttt gttcaaaaca ggattatcag ttttttcgcc agttaccaag
      721 ggcgactcgc atggtgaaca taattgcaat aatttgcaaa acaccatggc aacccacatt
      781 acaactaggt aaatactggt cttttgtgct acattgttat tttcagagat gctgaagtca
      841 aagaacgaat gacaaatgaa cacaaaattt atatttgctt tgtctcaaaa gagaagaaaa
      901 ttgataacaa gaattggggg gaaaccgact acagctgtaa tttctaactt gattaattag
      961 gatggtaaca gtccttaaca gtatattcaa caaacagccc tgacttagtc tctccaccca
     1021 cctctctctc tttctacact actaccacta acccccaccc cagacaaatt ttttcagcta
     1081 ggagaacaaa caactccatt tgctcttttc ttcaacttaa tggaatcctt aattacagaa
     1141 tattgttctc ctgttcttca ttacactgaa aactgaaagt gagagagaga aggagaaaga
     1201 ccgtgccaag cagacagggt agctacagtc atctttgctt tttttgtcca tagcagaccc
     1261 aaggatgaga tggcagtttt tgtaat
//
LOCUS       KCKM01003284             682 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51542apa ultra-conserved element locus
            uce-7105, sequence.
ACCESSION   KCKM01003284
VERSION     KCKM01003284.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 682)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 682)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..682
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51542apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>682
                     /note="ultra-conserved element locus uce-7105"
BASE COUNT          175 a          119 c          166 g          222 t
ORIGIN      
        1 cttccatttt tccatcctgt taatgctgct gcctgtgccc agacagtaat gggcttcttg
       61 tatgcccacg actgttatga tcatgtaaat ttattggtgc ttagaagaag cgagctatta
      121 aaacattaca acaaccatta cagccaggct cgtgttggct ttcgctccca atgaacatat
      181 gcttccgagt gaatgcctaa actcttattt atggatttaa tttaatatgc ggaaagaatt
      241 caaaattaaa ttttgtgtct gcctccagag agtgtcagtg tataataaca tggtaatttt
      301 tacacatctt tatgagaaat gggaaaatta attctttctg acaagttgta attattcgac
      361 ttggaacagt tgcagctgag cagtttgcat gcctgttgtc tgttgttgca cagtgcaagg
      421 ggaaaacgtg gggatggaga tatattgtgt gtctgagagt ttctaatagc ttctgacatt
      481 ttagccctgc gtgttatcag ggtgctcttt aaaggagtgg ggagtgtaat ctgctgccta
      541 gctggggatg cacatgcagc agtggacaca gtgtcaggag atgggatggg aattattttg
      601 gtctgtctga gcctgaggaa gggtctctct cccttacttt gcagatgggt aaaactgaaa
      661 gtgaggtatc attctttgtg ct
//
LOCUS       KCKM01003285             998 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51558apa ultra-conserved element locus
            uce-5404, sequence.
ACCESSION   KCKM01003285
VERSION     KCKM01003285.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 998)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 998)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..998
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51558apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>998
                     /note="ultra-conserved element locus uce-5404"
BASE COUNT          237 a          240 c          234 g          287 t
ORIGIN      
        1 gccatggtga tcttctctca aacgctacca acatttgggt aacctcattt tctcagttcc
       61 ccttccagtc ccgtttttcc ctcctcccag accctctcct ccttgtcagt gtgaaagcaa
      121 gaggagtgca gtcacggaaa agagcagaaa aggtcctttc catcctttca gctcctcttc
      181 acccgctctt ctctccctcc ctccccacaa aggagctggc aaagggtcta ggacagaaag
      241 ggttaaactg aggcgagcgc tagctccaac acagttaatc catataaagc tcatggattt
      301 ctctgcagtg atctttgtgg ttgtcatttg catttttttc cttttgtgaa atcttttctt
      361 cttccctttt acactcgtat gcatgcagaa attagcatat tgtaccgaga gtgggagatg
      421 taagaagccg accccctgct gttcagcgga ttgtgcaatc tgcaggcggc atcaattttt
      481 cagcagtttt ctcatttctc attacagtca gggcactgcg cagctcccga ttccgcacaa
      541 tccctagtgg tcctacagac gggcatatgg gctgccgaag atctgcactg ctacttttgt
      601 ggcgttaata tccttgttta tgcttccacc gtaattaatc ctggtattaa tacagtttgg
      661 gcttggcttt actaattgtg tatgggctag caggataatt atgtcagcag actccggcgc
      721 tggtgcctga cagcagtttg ctaacctcgg gagcggcacg gaaacactcg gccgatcctg
      781 ccttggaaac gaggaaggcg aagagatgag gaggagggtg gacatggtga actgatgtct
      841 gagaactata aatagggtgt ggaaaaaaag gacatttaac cagcgcgata aagttgtcct
      901 cgggtatcaa actctgtggt tgtcatagtg atatgtgcat tattaagagg gtgttgttcg
      961 ctctggcatc taatctcata atgaagacgg ctcattat
//
LOCUS       KCKM01003286             775 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51574apa ultra-conserved element locus
            uce-6748, sequence.
ACCESSION   KCKM01003286
VERSION     KCKM01003286.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 775)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 775)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..775
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51574apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>775
                     /note="ultra-conserved element locus uce-6748"
BASE COUNT          251 a          134 c          143 g          247 t
ORIGIN      
        1 caacaagaga cgcagatgct gttcggaaac tcaccgccat gctcgatcac ctttaagaaa
       61 acgagttttt ttgtactggt ggtttctcaa aaaggtggta tcagacaacg ttatgatcta
      121 ataaacttta ttttttaaaa atgaccattt ttccattgtc tttcctagga aattaaaccc
      181 tttaattctt acctaccctc tacataatgg ttattgagta ctccacaata tattaagtct
      241 agatgttatg gtacatgcat acactttcag gctgttgatt acccactgtc accaatacac
      301 ataaatggaa aaaagctatg aaactgtata gggctgtata tatacttgtc tcagcttcat
      361 tagagcagga aattgctgtg atttccagca ggttatgtaa gtaatgtcca gactgttcaa
      421 aaaaaactat gaacagagta aagtacaaga ctgttttgag gagactttct accgtgtact
      481 ttaaaacata gtaaaatttc tttcacaaaa cttagttaca tgggtacttt gttttatagt
      541 gcattatagt ctaggaagtc tcattaaaac actcgcttct ttttgttagg gtggtttgag
      601 tacaggctat tgctggggca gggaaggaga ttattctaac ttcagagaac accagaaaaa
      661 ttgctggata taatttaaga ttagtgtttt ctctttcata gaaagaacgt acatactggg
      721 acatgagtac agttacagca agtctaggtg tgctaacaaa acaggacaca ttcaa
//
LOCUS       KCKM01003287             952 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51590apa ultra-conserved element locus
            uce-7100, sequence.
ACCESSION   KCKM01003287
VERSION     KCKM01003287.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 952)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 952)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..952
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51590apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>952
                     /note="ultra-conserved element locus uce-7100"
BASE COUNT          281 a          207 c          168 g          296 t
ORIGIN      
        1 ccttacaacg agctgaaaga agggcaaggg aacaaggcac cctgagcgtg tctgggagtc
       61 tgataacaaa taagtcatct gtgtgtcact atgatctaca agttttgttg aaaccagcta
      121 ccctttctct ccagagtaac agagtcctcc acgtagccac aacagcaatg gatcttcttt
      181 cagcatagac ctctccaaat gttggcagca ttaattctgg ggcttaagaa catctgtgca
      241 ataggacagc agtattagat ctgccacagt aatgtctggt gcatccagaa cacacatacg
      301 caagcaccaa aatgacatca tccctttttc cttattttta ttccttttta tttttttttt
      361 ggtggaagaa gatccagaat caacccagta aaaagaattg tcataaaatc tcacaccatt
      421 gacttgtaaa tggaattgaa tctgtggagt ctacataatg atcctatcaa aaaaggaagg
      481 agctatcaca ttcatataac agatgagata tgaaatgact actatggcag atgaacaccc
      541 cagaggtatt ttgctttatt ctactcactg ggtttatatc tccagtttct ctaattttag
      601 ttattttttc ctcaggtctc aagacaagaa cagtaagact ttcttttctt tctttctttt
      661 tccccttttt ttaacaaata acctcataca gaagtcaata atataaatac ttatgtttct
      721 gaggtcagtg ctggggcttt attaaaactg atttttcaca atgtattcct ctgctgttgc
      781 ttctgctgtt gatgctagaa accttccagt catttcccgt tctctataac catcacttgg
      841 gttgctgaga agttaaagta cttgcagcag acaggggcca agtagtgaca ggctcacctt
      901 cctcactaaa gaaattgccc tgcttaggaa aatcagatgc aaagccctcc tc
//
LOCUS       KCKM01003288             359 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51621apa ultra-conserved element locus
            uce-2111, sequence.
ACCESSION   KCKM01003288
VERSION     KCKM01003288.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 359)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 359)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51621apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>359
                     /note="ultra-conserved element locus uce-2111"
BASE COUNT          132 a           58 c           63 g          106 t
ORIGIN      
        1 ttacatggca cataatttac atattcaata ctagtgacaa tttacttctc ccatctgagg
       61 agggctttca actatgccac ttgaactaaa ttaataaaca gtaattagag aatgttgtgc
      121 gagtgagctg ttgatgttga gaagattcta atcaacacct tcttttaagg gccaattaaa
      181 gctgaatgta tgcaatataa acatcttctt gtatttagac atgaactggc gaacaaggta
      241 aaaaataaaa atcagaacaa ttacagcagg ttagagatga tccaatgaat gatgaatctt
      301 cattaatcgt gaaagcagca gtaatttcta aaaaacactg gtcactttct acagtgaag
//
LOCUS       KCKM01003289             626 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51637apa ultra-conserved element locus
            uce-2043, sequence.
ACCESSION   KCKM01003289
VERSION     KCKM01003289.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 626)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 626)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..626
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51637apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>626
                     /note="ultra-conserved element locus uce-2043"
BASE COUNT          214 a           98 c          112 g          202 t
ORIGIN      
        1 tttagattca aattaatgtg aagacaagct ccttgagtca cctagtcttt ctctgtggaa
       61 tcatttctaa ttgaatgtta agatcaaagt ttaagtttat aagaaagaaa aacaagtgca
      121 gataaatagt tattatctga catccttatg aaaattcatg acctgccgct ttatcagaga
      181 ccttttaaga attctaattg tgaagtatgc ataactatta aatggctaaa gtgcttcagt
      241 ctcttgataa gaagcgagtt aaataattgt cctgtttaac ttgtgcttgt taacctttaa
      301 ggtcaactag tttgaacata cgtttaatga aatcctggag ccagaattta tgatactgct
      361 gctgaatgtt aaattggaca atttacataa gcaggacatt aaccttctga gcactaaata
      421 gcattttagc acttagccgc tggggacaat aagggacatg ttctatatat ttgtgattag
      481 cttgcctgga aactctcatg atgaccaatt ggcctaccaa gtttagcagc ataattaaat
      541 gaatggactc agcctaagta aattatcagt gctgtgtaca gtatatcatt atagtcccaa
      601 ggaaaaaaaa aagagatgaa taattt
//
LOCUS       KCKM01003290             595 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51653apa ultra-conserved element locus
            uce-2300, sequence.
ACCESSION   KCKM01003290
VERSION     KCKM01003290.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 595)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 595)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51653apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>595
                     /note="ultra-conserved element locus uce-2300"
BASE COUNT          187 a          109 c          102 g          197 t
ORIGIN      
        1 agaacaaaat atctttcctt ttatctagat ttctagcttc tccatagact agacagatac
       61 ctagaagcat aaaaagaaaa tgagggttga taaccattag tgaattctgt gcttaatgaa
      121 atctgctttc atattaaatt gcactacact taaaagatta cttcgacatg caagtgaggt
      181 aaactgattc tttattctgt taatgctaga ctgacttcac tgatcacact agactaaact
      241 gtatttttgt aaggcttttc aacaggcagc caaataaata gctttttctc tgctgcacgg
      301 tttgctgttt gcttaagcaa aaatccaatt tctggagaag actccacaag ggctaaattc
      361 cctgccattt acaagtgtcc cattagagta gctttctata tggaaataac attccaagac
      421 aaggagagaa agagtaggtc tgaggtccac tgttcctgat gtgttttatt atttcttttt
      481 catttgaaga gtagagctgt gctcccatga gaaagagagt aatatctgaa tacaaatgtc
      541 tcatgaaact ggagcttctt taaaagtcaa aacctcttcc ttgctttttt tttca
//
LOCUS       KCKM01003291             672 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51668apa ultra-conserved element locus
            uce-5531, sequence.
ACCESSION   KCKM01003291
VERSION     KCKM01003291.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 672)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 672)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51668apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>672
                     /note="ultra-conserved element locus uce-5531"
BASE COUNT          191 a          128 c          142 g          211 t
ORIGIN      
        1 tgaccatctg gtctccagac aagagcagcc catatgatca aactgcagct tccctagatg
       61 ggctaataca tccgtgctgg gacttaaaga agatgcagaa gtgctctgta aaaggccttg
      121 agcacctcta agggaacgtt gaggagaagg gggggccctg acgtaattcc tcgcgccagg
      181 cacccggcag gaccagtcct tgtatatctt tatcccttgg tgtttgttaa tggttacttc
      241 catttcgttt tgcgtttgat ttgtttacga actaataaat atgatttata aaaagtgtct
      301 gtggttcact aattactgca catatggcgt ttccattttg taaaactggc atttgctttc
      361 tattatgatt atgtctccgt tcaccagtgc taattagttt cattagacag ataactttaa
      421 ctattattag gactagatta gggcaacttt gcgtgcaggg gaatgcaggg aagaagggta
      481 catcgccagt gaagataggt cagtagcaca gagtttgttc ctcattaaat atttcaaaat
      541 tacttttagc tttgttttcc acacagaaga actgagaagc attcacgttt agctacttac
      601 agaaatccaa ttaaacacag ttgtttagca tgaatttatt aatcggagtt aatctttcca
      661 atgaatgcat aa
//
LOCUS       KCKM01003292             912 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51684apa ultra-conserved element locus
            uce-5982, sequence.
ACCESSION   KCKM01003292
VERSION     KCKM01003292.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 912)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 912)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..912
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51684apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>912
                     /note="ultra-conserved element locus uce-5982"
BASE COUNT          300 a          196 c          157 g          259 t
ORIGIN      
        1 aaaatgttaa tcctttcata cttgactgca gtctccaagc agtgactaat actgacttaa
       61 cagtgttatt tttaggactg taagctatga ttttttaaat acatataact tacagatcta
      121 gtgattttta atttctacag atataaaagg gagtttagaa tgcctgtctg ccaaaataga
      181 cctagtatga ggtcagacca caccatctac ttgactttac tttgatcata ctttctttct
      241 cacactactt gaaccatagt tctctctgct tgagagaaat tgctaaacaa atgtaagtga
      301 cctgcaacgt ctaaagcaga aggatctctt gacaactcac tgatctatta aaaatgcctt
      361 acaatttctc aagtttccca agatatcctg aaatgccctc ctttcttcag gaaacaagta
      421 tcagcagata tcagatgaat gcatgacaac catctaacca gcctgcagat ttaggaatcc
      481 acatgtaggc tgagaagatg cctgctcaca cacgcacaca cacacatata gcagtttaaa
      541 agaagccaaa gaaactacta gagcagcatt gttacaatgc tcatctgctt gtttcattaa
      601 gtagcatcaa agtttggtaa atactttaaa cacaagcaat aacttctgca gtgccacttg
      661 ctaactcagc taacagacac cataaagaac cgaggctgcg gaaacagtcc cacagaacct
      721 ccctgcagcc agggagaaca gcaatgggtg ttttagcctt ggtgacttag agctaagagg
      781 cagaagagcc cagagatttt atcatgaaat cctgcaggac tatccacaac tttaggttca
      841 ggtgcaaact ccataaaaga tgtctttttt ggaaagaatt cttataagct aatatctgat
      901 tcttgttttc ag
//
LOCUS       KCKM01003293             667 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51699apa ultra-conserved element locus
            uce-1417, sequence.
ACCESSION   KCKM01003293
VERSION     KCKM01003293.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 667)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 667)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..667
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51699apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>667
                     /note="ultra-conserved element locus uce-1417"
BASE COUNT          220 a          110 c          134 g          203 t
ORIGIN      
        1 aaaaaaaatg aacaaccaga agagttagaa gcttttacta ttaaactatc tccaattatt
       61 tcttttaaaa aatattttaa tttactttta ctttatttct ttgaaagaat ttgtggctag
      121 tataaaatat tcttacatta cttgcttgta attaagtatt ttaagctgtt tctgaagcca
      181 caagacagaa gattcaggca tggaggcaaa tggttttgct gtggcagtta caaacccgtt
      241 accatatttc tcatcatgtg acttttcggt gcgttccttg ctggaagagg aggaggaggt
      301 gtgtgtctgc cctagatcca ggcctcgagc tcccttcagc gaggcacctt acgcatggaa
      361 taggaggttt cacccacctg aaaccttcta aatacaatat cagtggtgaa aaaccaaaaa
      421 caagagagaa aataaaacaa gatcattagt aagagttcaa caaagcaatt gcattttttt
      481 ggatatgtct taacacatgg taatgaggac aatctgtaac aagggagaca tgcagaaggg
      541 agagggttaa tcagggcaac tgcatacagc agggactttt ttcttttttt tggaagaaag
      601 gctctgaaat atctacaaag aaattaaatt ttagttcaga ctgtaaggaa tctgctggct
      661 tgatctt
//
LOCUS       KCKM01003294             892 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51714apa ultra-conserved element locus
            uce-2869, sequence.
ACCESSION   KCKM01003294
VERSION     KCKM01003294.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 892)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 892)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..892
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51714apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>892
                     /note="ultra-conserved element locus uce-2869"
BASE COUNT          233 a          185 c          199 g          275 t
ORIGIN      
        1 gtatcccgtt tgacttgtgt ggcttttttt gtaagcaaag atccttgcca ctcccagctt
       61 tcctcctttg ccctccctgc taagatcatt tcctttcagt gaccagaggg atggctggtt
      121 ttgttaaaac ttcaggccaa aacagagagc atgcagaaat gccttctgtc ggttccgaag
      181 ggagaatcgt gcacctgtaa aatgaactgc catgtgcaga tacccccgaa ggtgatgaga
      241 tgctttaatt atatttggag cactagctct ttctggtgct ttgaagcagg ttcccaaaga
      301 gagatattta atcaaattta tgtttatttc aggcttaccc tctctagatc catccaacag
      361 ctctacaact tcttcttcag gtcctttgac aggcttttca gcaaacatac aaggagcacg
      421 ggtttacctt caagggccag cgcctgttgg gactcccagc tttaacagac agcatttttc
      481 accacatcct tggacaagcg caacaaattc atgtaggaac ttcatgggtc tgtcttagtt
      541 aactataaat tcatagctat tgtctttagt agatttgtaa cttgagggga aattacccgg
      601 tgatgcacaa aatgctttcc aattgcttcg agcagctgtg aggatggtgt gcaaatccca
      661 agctgtactg tgttttccca tgtaaaatgc cactagttct ggtagcatta ctaagggcat
      721 atttgggcaa aaatatcagt catcgtaggc tctgagagga gagggcatga agttgtgggg
      781 gagtggaggt gattatacca agctaaagat tcccctgtaa atagtataag tgcagtatta
      841 ggtgaaaaat gtcatgtttg ccatggtttg aagttatacc tgtctttttt tt
//
LOCUS       KCKM01003295             985 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51728apa ultra-conserved element locus
            uce-511, sequence.
ACCESSION   KCKM01003295
VERSION     KCKM01003295.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 985)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 985)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..985
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51728apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>985
                     /note="ultra-conserved element locus uce-511"
BASE COUNT          305 a          203 c          189 g          288 t
ORIGIN      
        1 ccataactta gatctctcac taaaatggag caacaggaag atataatggt gcatttcatt
       61 tatgaatgac ctataataaa ttaccatgaa gtattccagg tgccaaacca gagaatgctt
      121 tgtctgcaca agaactgtat ttcacatact ttaatttggc tgacacataa aactcatttg
      181 acattttgca ggtatttctt tgaaaggata tttggttctt gttgagcgtt aaggtatgga
      241 ggtggggtaa cctgggtaac agaaggtcat ttccaagtag attgttgtcc aagatcagct
      301 cttccaagta actgaatgtt ttcagtcctt ctagtgacct gcaaacgaca aaggcaacag
      361 gaaaaatgat actccactaa atcagggagg ctattatgag ctgaaataaa tattttaacc
      421 ttccctttca ggagtgggaa tagttttggt ttggccctgt cagaagagtg aatgacaagc
      481 attagtggca aggggagtgc tggcactgca acacatcctt cacatgctgg caggatgaag
      541 gatgggggtc acttagtgag tagccaggat ccaaaacaaa aggcttcaga tatggggcct
      601 gcaggatgaa tttgtcaatg tcttgtgcct tcaggcaccc agcctcgcct gaccctaacc
      661 tccattccca agataaataa ctctgtcaca gttcaccttc attccctgga cacaaattta
      721 agttgtcatc catcatttct gccaagaaat atcatacccc gctaacaata ataaatacaa
      781 cttcaagtat catttcttag cagttacctt acatgcaata ataggaaatg gagaaggttt
      841 ttttcttttt attaaccact taatttgctt cttggttccc tgcaaacaaa attaaatctt
      901 ctctacaaaa taaaacgtgg aattactcca gacagaaaag acatttgctt tcttttcgga
      961 acttactgtc ccactgtcaa gccac
//
LOCUS       KCKM01003296            1048 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51744apa ultra-conserved element locus
            uce-2968, sequence.
ACCESSION   KCKM01003296
VERSION     KCKM01003296.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1048)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1048)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1048
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51744apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1048
                     /note="ultra-conserved element locus uce-2968"
BASE COUNT          224 a          249 c          306 g          269 t
ORIGIN      
        1 attgcacgcg ctggtgagat cagttggggt cagtggagcg cttggaggat ctggggtgtt
       61 ttgggtgcgg gtcgttcctg tgctggccgt gcgttagtgg agaagcaggg caggagatga
      121 ggtgcttcag aaaagccgtt tcagtgtgtg agccatggac tggaataatg gggcagtgtt
      181 ggggtgtgtc gctggagcca agcagcctcc agaattgtgc cattgagggt gtcctgccaa
      241 gcctgacaga gccatgccat ctcccttcct tgctctcagc tttccctggc tttgcccagt
      301 gactcgaaga ggctggcctc ttattttcag tgcactcact ctcccaacta tttttttctg
      361 tgtctgatta ataaatcatg aagtttgccc aagactccct ctgtccccac ccaaatacaa
      421 acattcccca tcaccgccac cttgcaacta gcaaagctgc tccctctgac aatcaattac
      481 cctccggaga tgaaattatt gtttaatggc ttttggaaca ggctcctgct ctgacattca
      541 tcacaatcaa taatgcatca gcggggacaa aagaaattac ctgcctcctg ctaagtgaaa
      601 gagtccattt gtattctgca tggccccttc acgcccactg agccggcaac cacaggtgga
      661 tcgcgccgac ggcacggagg gcggctggct ccggctgaat tccaccaaag ttgtctgaaa
      721 cttcatcgtt ggtgcttatg tgagcaaggc tggctgtgag agccaggatt taggggatga
      781 aggatgtgat ttgaaaggtg aagatttagg tcgtacctat ccgtggtgtt ggagccaggg
      841 tgtgggatgg agggctggaa gaagaggtag gaccgtggtg aaggagatga ggagtggcag
      901 gtatccccca gcagcaggca tcctctcgcc atgggggtca ctgctctgtt ggttgtagtt
      961 tggtccttgt ttccactaaa gcagggactg ctttggtctt tgctcggagc gaagagggca
     1021 aattgtcctc cgagggttag ctctgatc
//
LOCUS       KCKM01003297             645 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51758apa ultra-conserved element locus
            uce-487, sequence.
ACCESSION   KCKM01003297
VERSION     KCKM01003297.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 645)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 645)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..645
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51758apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>645
                     /note="ultra-conserved element locus uce-487"
BASE COUNT          215 a          111 c          109 g          210 t
ORIGIN      
        1 tcacaaatta tgtgggtttt tttccagctg agtgaaagtt taagtgctaa ctagtatttt
       61 tgaatactta ccatgagata tcaaacagca tgtgctttct atttatgttg gttaccaatc
      121 tcaatattca gaggaagagt gtataaagtt aacaagcaat tatttggcaa attagtactc
      181 aacaaccctg agtaaatagg aagtttgaaa cctatctgtt atacagctac tttaatttgc
      241 atagcacact ggtgtgtttg ctttgcaaat actttgcaat gaatcatcat ttgtactata
      301 cagtccaaag aaaagcaatc aaaattcaca gcaagacaat gaaattaatt ataactgttg
      361 aattctgtgg tggtaattcc tcctcatgca ggaagattaa ttgcattgca ctttccttgc
      421 actccactaa atgatctgat gaatgtataa tcatttacag atttctcaaa tgctgaaaat
      481 tgattacctt tgattagctc tgatctgcac aaagagctct gacagagtat cagtgaaaca
      541 ttacaacatt acagacaaag taacaaatga tttaattacc agtgtgctta ttaatgttag
      601 attccctgca gtgatcctgg caaatcaggg gcctgtaata gacct
//
LOCUS       KCKM01003298             919 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51773apa ultra-conserved element locus
            uce-2302, sequence.
ACCESSION   KCKM01003298
VERSION     KCKM01003298.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 919)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 919)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..919
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51773apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>919
                     /note="ultra-conserved element locus uce-2302"
BASE COUNT          311 a          147 c          162 g          299 t
ORIGIN      
        1 ctggtgaaaa cttctgaaac tgagtaaatc actatcttga aaagagttta tagtctctga
       61 acaaaataaa atgaaattac ctatcctctt aataattact cttaattatt tgtggttcta
      121 cagaagtagg cctgggtttg gacaaaaata attatctcac acatctaaat agatgttata
      181 atttaatttc tattttaaaa aagaatagaa ttgaaattaa tccttcaaaa aatatgtttt
      241 ctttaaggac acatacttca ggtctacata ggatttctat tcattaaact gcctccttag
      301 gtcaaagacc aaaaattagt gagggtccac aacatgcaga gctttaaaaa atgtcacatt
      361 ctttcatttt cagcataaga aatgggcaac ttgttcaggg caaatacttg tttgaactga
      421 ggattttatt attaatctct gaagactgct gaatttaggg tcacagtaag ggttgattag
      481 gtacaaggtg cacaaagctc tcctctgtca atgctattga atgaagcaag taatttagat
      541 tcagaattgg tcttggattg aagctcactc cattaccgac cattttcaat ttcagctata
      601 caataaacat caagctcagc aaggaaatta gtacatttgg taatgtattg ggagagatgg
      661 gtgggtcttt gacaagatga cacttatcac caaagcttca gttaatgaaa cccttgagtg
      721 gtttcctcgt ttgacatatt ttgacatttt ttgaaatcac atccagcggg tttttttacc
      781 ccacaatgtt cttctttatg agaaaaaaaa ttccatctat ctttaaaatg agtactgaag
      841 tactgcaata ttattggaaa aaattaaaga gatgctgact gcattgaagg caggggggaa
      901 gagaatgtga cttccttta
//
LOCUS       KCKM01003299             775 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51789apa ultra-conserved element locus
            uce-5766, sequence.
ACCESSION   KCKM01003299
VERSION     KCKM01003299.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 775)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 775)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..775
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51789apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>775
                     /note="ultra-conserved element locus uce-5766"
BASE COUNT          204 a          177 c          162 g          232 t
ORIGIN      
        1 tgggaaaatc aagcattcaa tatgtagcgc aaggttcatt tgcagccgta taatcactgt
       61 cagctaatgc ctgataaacc ctgtctaaat tggaatttta ttatatctat tttacgatat
      121 atctatattt attccgatga aagttggaca aacttgtcca aaagactagg ggtccgtttt
      181 atgtgcttgg gtgtccaagc acctgccagc tgtttgtccc ttgaattgag gacatcatgt
      241 tttcaatttc cttcaataaa gctatgaatc tggcaatttg ctggcctgct tcagctaaac
      301 agaaaggaca atttgagaaa gatcatagtt caggctcagt cagacggaaa cgattgaaaa
      361 cagagagctg gccgctatgt ttccccaatg cagcttgctg tcgcagtttg actgacaaac
      421 tgactttttt gaggtgctca tgcccatttc agtcagagtt tattgaaggt gattttgatc
      481 ttctccatga ggccacagca gcggccatgc catctgtcac cttgattgca tcgtggattc
      541 tctggagaga gtgcgatggc tcctgatcat ttacagattg tgctgctttc gcctccataa
      601 ggaccacatg cacagagcca gatggtgaac atacacgctt attataagtc tttatctctg
      661 tgcaggaagg agaggcacca ttagatctcc ctcaggagct ccgctcctct ctaccatcat
      721 gctgctcttc agcaaataca gtcttcttca gctgtcatca acctacctct gaaaa
//
LOCUS       KCKM01003300             779 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51805apa ultra-conserved element locus
            uce-1816, sequence.
ACCESSION   KCKM01003300
VERSION     KCKM01003300.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 779)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 779)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..779
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51805apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>779
                     /note="ultra-conserved element locus uce-1816"
BASE COUNT          167 a          229 c          181 g          202 t
ORIGIN      
        1 tctgctacta acgtctgcct ccgtctcccc tgcaaaccct gggagaggaa acagggagca
       61 acaaggtcct ggtccaaggg gctctcaatc ctcaaaatgg attttacctg tctctgaaag
      121 ctgcctccat ctctcacccc ccattgcttt ctccctaggg aaatcagtct aaaaggggct
      181 aatggaacaa tgtccctctc tctcccccct ctcattttct ctctcttttt ttttttatta
      241 gcatttgtgg aatttattcc caaactctcc taatctttcg tacacaacca tttgatttgc
      301 ataacccagc cccctctcat aaaaactggc tgctagttta attaaaaaat gtaaatttgc
      361 tgtcatctcg gggcctggtg aattaggacg acatcggcat tttttattgc tgaagacgtc
      421 caaattgatc cagtccgcac tgaaccggag gggaggagat ggtgccgcgt gggacttctg
      481 gctgcaggtt ctgcccctcc cctgcttcca gccgagcctc ctctgccccc tctttgcttc
      541 gcaaagtgca gctgaggacg aggacaccgg ttctcccaaa cctcagctgg atcagccagt
      601 gcggcctcgg aggtgtcagc acttctggga gctgagccct gggtggcacc tgagctctcc
      661 aaaccctggg aacggccacg tctccaaacc ctgggcggga gggaaggagc ccaggtggag
      721 gtgggagatg cagcacaggc aagggttgtt ttcacctccc acagcacttt tcattactt
//
LOCUS       KCKM01003301             888 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51821apa ultra-conserved element locus
            uce-5638, sequence.
ACCESSION   KCKM01003301
VERSION     KCKM01003301.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 888)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 888)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..888
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51821apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>888
                     /note="ultra-conserved element locus uce-5638"
BASE COUNT          272 a          149 c          180 g          287 t
ORIGIN      
        1 gagtgggatc acgttaagga aatctttcaa atgtccacat aaaatgatgt tattaagtca
       61 tgaaactact agaacgcaga aaaaaaagat ggtgtaattt caatcctagc tttttagttt
      121 attgaaatga aggaccctca aatggtctag ttaggaatta agttaattgg gtttggtgta
      181 aggttggtgt acttcccgct ggaaagtttc ccatatttcc tcagtataag tagcggctgc
      241 actcccatgt caccctgtta gcccagactt taattagttc tggcattcgc ctcataatga
      301 taaatgctga gatgatgaat ggaaatgcaa atgagtgtga agtggctcag ccatcagtgt
      361 tgaatatcat taataccttc ctactgttag atcgatcaat gtcatcccag gatccctctg
      421 ttcagcgggt gcagatggct gtccgccaga atgccttcca ttatattggc agtgaaaact
      481 ttgtgggttt ttcctcccca tatgctttta ttcatctttt gctgaatatt tgtttggcaa
      541 ctagaactct aatatatttc cagctgagat gataactatt tagggtcaat aagcgagtag
      601 ctaatttaga gcaaaataaa tatgaatatg gatctcttct cacatcagga gagaagcatc
      661 aagtgcagat tcaatacatt ggagaggaac agaatttttc atgatgtaaa gtttcatgcc
      721 gtagcaatga aagataagaa atataggatg taaaaatgtt tattcatttc tcaggcatgt
      781 tacatctttg tattttacaa gtttctgggt ctggcagcat gtccacagaa ctaagtttta
      841 taagaatcaa agggttgtat tatgttcaac atgaaatttt aatatccg
//
LOCUS       KCKM01003302            1105 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51837apa ultra-conserved element locus
            uce-4778, sequence.
ACCESSION   KCKM01003302
VERSION     KCKM01003302.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1105)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1105)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1105
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51837apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1105
                     /note="ultra-conserved element locus uce-4778"
BASE COUNT          314 a          275 c          221 g          295 t
ORIGIN      
        1 atttgctagc ttcttaatta ctgctgctcc agtccagtcc atattgccag cttgattatc
       61 ctggcttgct tcaattcact gaaacgagtt atgccacggc acttaaaaag tcgtgaacac
      121 tcatcctttt tagtggtgtt aggctcccgc ctcgcaaatg taagctgaca cgaggactca
      181 actctctgca aaacgagaag acaaggccac cgcgatggga agagatggcc aaagccttta
      241 ttgcggctga caaatctcaa tgccatcgag aagtggagct tcacccccag cttgcacaga
      301 gagatccacg ttcagcttga cagctgagtc tttgggagac tcggggttaa ataaaaaagc
      361 acagccgttt acatgaacct taaacaaact tacagcagca tttttcttct agccgactga
      421 catttttctt tatgtttcgt cagtcatatc tgagcgatca gacagccact acacgtggta
      481 cacccaccag gattattatc tagaccaaag gcccagagct cattgtagca ggcatgtaat
      541 tctttacaat gtatgccacg ttaactgtgt tgggttatct attcaacagc tgactgagct
      601 gggctctcaa gctcttctca acaaccatgt aagaagcgat gacaattgta ctacttcata
      661 acggctgcat gcaactctga cacacacttc acagcaacca gtcatctata taaaccaatt
      721 tcaagagcaa aattgcatgg tgcctccact ctgttataaa cacaatgata tccactcaaa
      781 gctgataaat gcactgcatt tctccagagc cttgaagaac aacttcctcg tgcctgtgag
      841 ctctctgcgg tgggttcggc ctcttcaccc tcttcacgac ccagccggtc gctgggagat
      901 gcaaaaaaga gccaggcagg gggcgaaagg acgttccccc tcttcagaga tgctgcatct
      961 gacgatctgt gagagaaaac aaggttatac gcaatgaggg ttttaaatac ttatcgactc
     1021 cttagcaatt ttcaaattaa ttactctgcc ttttcatagg attacgtgca atataatcct
     1081 tattatggaa taaaatatct atagc
//
LOCUS       KCKM01003303            1128 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51853apa ultra-conserved element locus
            uce-7587, sequence.
ACCESSION   KCKM01003303
VERSION     KCKM01003303.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1128)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1128)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1128
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51853apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1128
                     /note="ultra-conserved element locus uce-7587"
BASE COUNT          251 a          294 c          311 g          272 t
ORIGIN      
        1 gatggcagct ggtaaatgta gtgtgaggtg agacctgagc aggggacaac ctttgcagga
       61 gtgacctccc ataccatacc tcttcacagc tgcaaacagc tgggctgctt tcacccctgg
      121 ggctaacact cctgtgctta caagcctgaa agctccaaaa tttgggtgaa aagatagggc
      181 agacatctac ccttgctggt taaggcttct tccacattgc aagactcgtt ttcagtcagc
      241 tcctgcagct ctctcggatt ttctcgcgtg gctcaaggca tttttgggta acgtggggct
      301 ggtggagata gtctggttgt ggtcagcatc tcgttaccag gtgctaaatg gcagcagagc
      361 atcttagctc aggcattgga gaggatgcag ctttccacag gacgggcagg gctgtgcaca
      421 gcagcttgct gagccacccc ttcccctcgg caaatattta tgctttaagc tgtgtcgctt
      481 aaaggcctaa ttggagtcta ggtgagcctg catgctagga gagagcctaa tagagacatt
      541 gcagtgctat tagcacagat ggttgtcata tgtatgcaaa tgaggagcaa attgaatttg
      601 gtgtcccctc tcgccagctg tcctatcagc actggctcct gcagcagcaa aagacgctgc
      661 cactgctctg ctaatctgtc atcgcagatt aattacaact aacacattaa tcatcatttg
      721 tttcctggta caaaggaagt atcttgttct ttcaagtgca ttctggtggg atggggtgct
      781 ccaacctggg aaaagaaaag agaaaggcaa tgagggccag gcagcttcat tagtgccagc
      841 gcccggggct ggggctgcag gagcctcatc gggacctgcg tgctccttct ggcaagccag
      901 accccaccgg gggggtccgg gagccccagc cgcctgccag gagctcctgg gacctccact
      961 ttgctcctcg agcctgcccg cgacacgtgt ttctctgctt ggcttcgtcc caaagcgatg
     1021 gtgtcactcc tttcccaaag ctggcagctt ccaagggggt cgttagtgtt agcacagacc
     1081 agagctgctc cccagtaaag cagctgtaat gggagtgctg ggccaagc
//
LOCUS       KCKM01003304             521 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51868apa ultra-conserved element locus
            uce-2154, sequence.
ACCESSION   KCKM01003304
VERSION     KCKM01003304.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 521)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 521)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..521
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51868apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>521
                     /note="ultra-conserved element locus uce-2154"
BASE COUNT          167 a          107 c           75 g          172 t
ORIGIN      
        1 aacattctgc ccatcaaatt acagtgttgt ctaataaagg gtttaacttt ctgctcatct
       61 ggcactgctt ttcagctact gcttcaaacc tctgcatttg cattctgcta acgctgatgc
      121 cattacagcc gcaaataaat taagctgatt tactccttct gaattatgtt atgtttattg
      181 atgcttgtat aatttaattt cacacaaatt ccattaaaga ttatgccctc tatcacaaaa
      241 tgcttccagt ggggaaatat aatcaggtta taatagattt gtgtgttaca ttaagatgac
      301 aatagtctag taggtccact gtaataataa aacagaacac aaacaaggga taaaatcaat
      361 gtcacacaag aaccactgcc tagctaactg gcagcttcta ttatcacaga ttaaataaaa
      421 acctcaccat actttctcag actgaaacaa ttgtttaata gttgctcatt ttgttactga
      481 gactccttca tttttctgtt ttaaagagct gctaccaacg c
//
LOCUS       KCKM01003305            1072 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51884apa ultra-conserved element locus
            uce-2387, sequence.
ACCESSION   KCKM01003305
VERSION     KCKM01003305.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1072)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1072)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1072
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51884apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1072
                     /note="ultra-conserved element locus uce-2387"
BASE COUNT          339 a          212 c          212 g          309 t
ORIGIN      
        1 aaggctgaca atgaccagag aacaagctat ccattaattg ggatagggct cagaaatcac
       61 cttcagagca gatacagtaa attcatcagt gctgtgtttg tggcagtgaa caaaactttt
      121 tgacaaacaa caagaagcac ttccaaggac aggtgttgtt gcttgcagct taaagattaa
      181 agtggaacaa atcctggcac ttgtagatgg caaccttcgt agctaggaaa agcttattct
      241 gcctgaaaca cagcataacg agatgtctgg gctgtattac ctacttacct tctaaaaagt
      301 ttccatcttt atgtacagag gtagctgttt aagcgaagga ggaggaacaa tttggctatg
      361 tcactctacc aatttctgaa gcttacaact tcacttaggt tccctagagt ccatagtaac
      421 atgaattgtc tttatccaag tgcttagcaa atcatttgca catagcagta gtcgaccttt
      481 ctcttcaatc tatgcacctt tcaggagtta taaatcagtc gactttcaag ctcgatgaga
      541 tggcatatgc cctggtttga agaacagatg gaggcttggg gtaaaattgt ttctgcaggc
      601 ttgctacaag cagcactact ccataaaagt gaaccattcg cactaatttc tcacataaat
      661 aatacaggca gggagcacca gcccattcag cagaaaatct ttcatctagc tttcagaggt
      721 catttagcaa atttaaatta aagttatttc tgatacatgg ctgggttttc attccgtacg
      781 ctttcaagag atggcaattt acatcaaata aagaaatggc tttaattgtg tatgcaggga
      841 aaaaggaaca gtaaattaac tgccacaatg ttactgtttt ctccattcct ggagtaagtt
      901 gtgattatta attagccaca gaggaattaa tgattaaaat atagcagctc tgtagaacta
      961 cagaatcagg taaactgtca ctactctttg caaggcctgt tttagactgc agccgaatgc
     1021 tagtccctac attcatcagc actgatgtta aaagaaagac ctcagtcatt tc
//
LOCUS       KCKM01003306            1168 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51899apa ultra-conserved element locus
            uce-419, sequence.
ACCESSION   KCKM01003306
VERSION     KCKM01003306.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1168)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1168)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1168
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51899apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1168
                     /note="ultra-conserved element locus uce-419"
BASE COUNT          309 a          300 c          229 g          330 t
ORIGIN      
        1 gtgtctcggg gtagtccaat gggtatgaat atgggacagc caagctatac cccaccccag
       61 atgccccccc atcccgctca gctgcgtcat ggccccccca tgcataccta cattcctgga
      121 caccctcacc acccagcgat gatgatgcat ggaggaccac cccaccctgg aatgcccatg
      181 tcagcatcaa gccccacaat gcttcatccc ggcgagccgg cagcgagcgg acaagtgatg
      241 gacattcatg ctcagtagct taagggaaat acgcgttgtc tgcagcgacg gtagctttca
      301 aacattgtct ttctgcaatg actacggagt tcttggcgtc aacctttgga ccaagggacg
      361 ttgcgattct tcacagggac cctgaaaagc aggaaaacac caaccgaagt caacttctgg
      421 ggacatgcta aatacctata taagacatta agagaacaaa gagtgaaata ttgtaaaatg
      481 ctattatact gttatccata ttacgttgtt tcttatagat tttttaaaaa aaatgtgaaa
      541 tttttccaca ctatgtgtgt tgtttccata gctcttcact tcctccagaa gcctccttac
      601 attaaaaaaa agaagcctta cacttatcct gcaaatgaca gaaagggctt atttgcagga
      661 tttttagagc attaaaataa ctatgtcagg cagaagaatc tttcttctat cctaggattt
      721 cagccatgca cactctctat cctctcctcc tccctctccg tctgtctttt cttccctctc
      781 tctccctttc tccccgtctc tctccctctt ctctctcttt ctagcctggg gcgtgaattt
      841 gcatgtctaa ttcatttact caccatattt gaattggcct gaacagatgt aaatcgggaa
      901 ggatgggaaa aactgcagtc atcaacaatg attaatcagc tgttgcaggc agtgtcttaa
      961 ggagactggt aggaggaagc atggaaacgg aaaggcagtg tatttgaagc ctaattgtca
     1021 catcagagca tccctgtccc catgcagcaa ccaccacctt gtacatcact tcctgtttta
     1081 tgcagctcga aacatggact gaagatttat ttttaatatg ttgactttct ttctgggcaa
     1141 gacatcggtc atgtgtgcat tctttctt
//
LOCUS       KCKM01003307             941 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51915apa ultra-conserved element locus
            uce-183, sequence.
ACCESSION   KCKM01003307
VERSION     KCKM01003307.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 941)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 941)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..941
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51915apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>941
                     /note="ultra-conserved element locus uce-183"
BASE COUNT          300 a          181 c          184 g          276 t
ORIGIN      
        1 tacagccttg ctctgcccgg gaatggcgag aagttgacat gtagaaaaac agctgaaatg
       61 aatacggatg aaatttgaaa gtgcaatttt ccatctgtca atcagctcct caaggtagac
      121 cccagccacc aaccggagag acgcgaggtg aggtcatcct cggctccagg cttccatttg
      181 atagctcgcc cggcctcatt aatcaagatt ttaggcgctg ataaaagttt ggatggggca
      241 cgccacggcc cgcatcgctc caggaatatt ctatcgcgtt gtgttttttt ttctcgacgc
      301 gctattgata atttatattc ggaattaaaa taaatagtct ccttttaaat agaatttgat
      361 tagatgacta caaaatctat ttctcttgtt atggtacata gcagatcatt tcctagagcc
      421 tgcctcagaa gaaaatgtgt ggtatttcta gcattaataa tgtatggtca ccaaaaccca
      481 ttctggccat agcttcgaga tgcttcaaaa tacagccaat taaggtttat ttaattatta
      541 aggttgaata aataacagcg aaacatgtta aaaatctttc agtttcagtc aatcataata
      601 aaaaattaat gagactggat agagagccat aaaaactgat agactgcaat cgtgaattat
      661 aaattggtat tgattttttc ctttgcaata acactctcag gtaatcgtat gttgccacat
      721 gtaaagtgca ctttcctggt tgagactaat attaactatc aaatatatat gagatggagg
      781 catttatgac acttcggatt tcacaaacaa aaagaaaaaa atactatttg tggaataata
      841 gcggcgctga acacagaatc ctagggtgtt tatgggagca gaaagggatc ccactgtgcc
      901 gcgaattcat aagacacagt taccttattc ttctcctgcc a
//
LOCUS       KCKM01003308             553 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51931apa ultra-conserved element locus
            uce-2818, sequence.
ACCESSION   KCKM01003308
VERSION     KCKM01003308.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 553)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 553)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51931apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>553
                     /note="ultra-conserved element locus uce-2818"
BASE COUNT          111 a          147 c          149 g          146 t
ORIGIN      
        1 ggttgtttta gggtgagcct aggagccccc cgggccctct tccccctcct ggtccccccc
       61 gtgctcccgc cgtggagttg cagctgtgtt caccataaca tttttttgtc cgtagtgtgt
      121 gatgatgaaa ttgttaattg tgaatagaat caggattata aactaatttt taatgaaaaa
      181 aaagtatata cttaaaaatg tatttatggc tcagatgtac tgtaattcag atttattgta
      241 ccgcttcctt gatttttaac tatgcactgt aatgaggcat ttgccactca gcaaatgagg
      301 ggtcagagca gagtcctggg gctggcattc acacctcggc cacgggtgcc tccccccgaa
      361 ggcaaaccag ggtgctcggc agtcagggtc gcccactttg ctgtcaaagc cattcttctc
      421 gctcgcgtgg ccccggcccc cagcccggct ggggctctgc acccagatgc tgagctcggt
      481 cctggtgcgt gatggaacca gcgagcggtg gggcacccgt gctgttcttg ccgtggggcc
      541 aggcagcttg gca
//
LOCUS       KCKM01003309             387 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51947apa ultra-conserved element locus
            uce-1742, sequence.
ACCESSION   KCKM01003309
VERSION     KCKM01003309.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 387)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 387)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51947apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>387
                     /note="ultra-conserved element locus uce-1742"
BASE COUNT          110 a           70 c           81 g          126 t
ORIGIN      
        1 gcaaacttgt aattttaaag caaattttgt tgcacttaat tattttttcc atccctcccg
       61 acgtacgagt taccttaact gcaaagctct gtagtaccct ttgcctgtca tttttaatca
      121 ggttgtttta ggtaattttt gttatgcccc tcattactga attgtttatc aataggtgca
      181 ccaagtgtca ctagcttttc tcatcaagcc aggtctgaca aagagctgca gtgcatggga
      241 aagaggcagc taggtgaaac taatgccata gatgtttgat tcattaggag cttattgtta
      301 acggggatgt ctgattgtaa aggctcagtc aagcaaaaga gtgcagagta atcagtcgga
      361 tttatagttt gcagggctca aaaaaaa
//
LOCUS       KCKM01003310             816 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51963apa ultra-conserved element locus
            uce-1909, sequence.
ACCESSION   KCKM01003310
VERSION     KCKM01003310.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 816)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 816)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..816
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51963apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>816
                     /note="ultra-conserved element locus uce-1909"
BASE COUNT          242 a          148 c          163 g          263 t
ORIGIN      
        1 aaatgaaaga acgactcctg tttactttca aaatatttca tagctaaaat gcttcctgca
       61 tttttaactg tgacatacct ccttgagctg gtttcggttt tgaagtaacg atataaaatt
      121 catttcatct ctttttcaag cctgactctt tcatacataa catcaggcat gtcatatctg
      181 aggaattatt aaaataagac gaagcctgct gtatctgagc agaaaagctt ctttgagctg
      241 gcgtcctcag gagagtagca agctcaatct cattagttgg tgctgagaag gcgtcctagt
      301 cactaggttc aaggtgatga aagattaggg cgtttggcct cagctcattt tgtatgcagc
      361 tcacatcgct ccctgcccgt gaacacgaaa ttacattgaa cctggggagt ctaactccat
      421 taattttaaa tggaagatta atttaacaat atgcggcaga tatttgttac aaacctatca
      481 tgtaaaagtg acggttagca ataaattgtg gtgactcaca ctggccggtg gccctggctc
      541 aaataaatca gaaggcattt acacataatt gctgttttta aagacaggga tatgggagat
      601 atgtttcttt gatgaaagat tgggtaactc cattcaagga aacagcagcc aatattaaag
      661 gtacagcgtc tcttttgaag gagctatttt gtctgagggc ttgtaggact gcaatacgta
      721 gctaccgttt atcttttctt aatctatgct taatttttgt cttagataga tcattttcat
      781 tgattttcat gtaacagcaa gatagaaact atttat
//
LOCUS       KCKM01003311             582 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51979apa ultra-conserved element locus
            uce-4025, sequence.
ACCESSION   KCKM01003311
VERSION     KCKM01003311.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 582)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 582)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51979apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>582
                     /note="ultra-conserved element locus uce-4025"
BASE COUNT          204 a          100 c          104 g          174 t
ORIGIN      
        1 gaagaaacat ctatttcatt atctcaaata gcttataaat gctttttaaa aattccatta
       61 tttgcacagt gtaaggaccc caatacaccc taacaactgt ttgacctgaa tatattaaaa
      121 atattgtaat gttttgttac atatcccaag gtaaaaaatc aggctatggc ttattagttt
      181 tctcttccct gcttcctata aaggtttatt tgacagagca taagatagtg gtaaaatcct
      241 aaggtaaagg ttaaactctg ttttattatg tttacaggat ttaaagggta aatcaggaag
      301 tgcttattta acatcaagtg aaagtggtgg attagtaacc agaccgagac ttaaaagcat
      361 ccttaatcct taaaatctct aagggtgaaa ggtcactctt taacaccagg ttgtgtaaag
      421 aatgaagcag acagaagctt ctgtttcatc attgcccagt taatccactg aggaaatgag
      481 cagcattggt ttttgctagg taaactcctc ctaaaaccaa ggaaacagag aaaagcccga
      541 acaggaaata attaaagtag gtttattcca cgaacacggc ag
//
LOCUS       KCKM01003312            1144 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 51993apa ultra-conserved element locus
            uce-436, sequence.
ACCESSION   KCKM01003312
VERSION     KCKM01003312.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1144)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1144)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1144
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51993apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1144
                     /note="ultra-conserved element locus uce-436"
BASE COUNT          364 a          225 c          173 g          382 t
ORIGIN      
        1 tacacatgta tacataatat atttgaaata cgtagggcga atataaagac cgagggttta
       61 aaccctccgt ttatcagctc tacaggccca gttttgcaat caactaaacc tacagtacat
      121 tttcatcaag tgctgcaaat cagcaaaata ttaaatgaat ctcaaaaaaa tgattatgaa
      181 tccacagttc tgtttgactg tataattcta tttaagatta aaattactat cataaaaagg
      241 ccactttctg aatgtaattc cacaaaaaca tcatcacaaa agcttttact gctatttatg
      301 tcagaatgta ttttaaacag ttctaatcat ttacctttgt ggacacttaa ttaaaattac
      361 aaaaccaatt ttaatctgta gtccaattaa tatgcaaata tatgcaaatg tggtaaatca
      421 aggtggtgat taagttaagg acactctatt tcatgtctgc tttaagtgtg aaaacaaaca
      481 atcttttttg taattgtact gatggattgt gatgtttata gggttagtat ggggtacaaa
      541 tgtttatgca tcaacattat gccaaaacaa agattttata ctctggagtg atttagcatc
      601 cagcatacat tcagatgtaa caaagtcatt ttgcagtcat cttgtgaatt agaataaggt
      661 caaagcaaag ttaaatttct atgtcatcca tttgtatggc tatttaaaat tcaacaatca
      721 ctttctgatg tgttaggtaa gagccaagaa gtctcaagaa tggcatatta tcacccttta
      781 tcatttagtg ttcataatac actggtttat ctttgatact attacagaaa tagttctccc
      841 attaaggtgc aaagatattc atccttctta accctttttc ctccgcaagt tcccattttc
      901 aaatctgctg ccaaaggttc acgtagcagc gagggcttct ctacagatat gcgcaccaaa
      961 tattgctaac gtacccactt ttgcagccac ttttcagccc ctttttttcc ccccttgcca
     1021 atttgcagag gctgatgctc cttcccgttt gcctgaaata aatctgtcgc tcttcatagg
     1081 aacaaatctc aattcctcca cttcagggca actgttctct tggactgaag caacttcatt
     1141 tgcc
//
LOCUS       KCKM01003313             989 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52007apa ultra-conserved element locus
            uce-3959, sequence.
ACCESSION   KCKM01003313
VERSION     KCKM01003313.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 989)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 989)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..989
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52007apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>989
                     /note="ultra-conserved element locus uce-3959"
BASE COUNT          328 a          149 c          173 g          339 t
ORIGIN      
        1 acttatattt gctattttga atcaagttgt tgatgtggga tatcctttat tttggcatta
       61 gcacccatgt cacagcaata tcagaatctg catttaaaca atcaacataa tgaaatggaa
      121 gtgtaaaatt cagagattat tattacttta aataaaacgc ttacctatcc tgaaatgcaa
      181 atatttattg aatgtgtgta tgattataat attcccatgg tagctggtaa ttttctgatt
      241 cttttacagt cttatttaac acgtatttat tctttgcatc catggtcttc attcaacagt
      301 ggacatccta gtgagctgta atacaaggtt ttttggtttt aaccttcaaa ggaatttagt
      361 tgagcagatg ctacattgaa ctagtcagag tagaaaggaa atgatatggc ttttaaaggg
      421 cacatctagc atatctactg ggctagagta attctggcaa tgcttcaaag gatataactt
      481 ttgatggtaa agtaggtagg ctacagaatg aaatcacata tggcaagctg tcaaagtctt
      541 cctacacatt cagtacattt atataagtgc aaatggatgc tgcttagatg gagtccctag
      601 caatttcctg ttaaatctgc tctaagatta tctgatatta tttgactaaa ttatctgtgt
      661 aaaagctgag aacaactttt atgatcaaat atttagaaat tatttttggc agataatctg
      721 aaatatgaac tgcaatcgta ttaacacttg aaagcaaagg gctttcagta ataccaatta
      781 tatcaaaaca gggataatga attgctgtat atcaatttga agaggacgta tttataggtc
      841 aatgatgtca atagctatag ttctcataga cacctcattc ttacgctttt attccttgct
      901 aatgctaagc agacagtttt aacttctaat gagattggta actatgagaa tctcatctta
      961 caatggaaag gaataagtag tttacaacg
//
LOCUS       KCKM01003314             749 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52023apa ultra-conserved element locus
            uce-7231, sequence.
ACCESSION   KCKM01003314
VERSION     KCKM01003314.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 749)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 749)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..749
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52023apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>749
                     /note="ultra-conserved element locus uce-7231"
BASE COUNT          227 a          140 c          138 g          244 t
ORIGIN      
        1 tcattgtggc agtttgcaag gatgcctgcc ttgtctcgcg gggccttttc ctcccctctc
       61 tctcacccac cccatcaaca ctccagcatg aaaacgggat gccatcaggc gcagttatta
      121 atacacaata gaagtgccat gtgtgattgt ctgtgaatgc tccagtgttt tatgtaatgc
      181 agatttagag atttcattgt aaagtcactt taaactctga actaatgggt agtttggcaa
      241 cagcttctaa gtatgaaatc attattaatt cctttagtac cataataaca ttgatttaga
      301 tgaactctta taacatagaa attgtatagt atttagctgt aattaacgtc ccctaattag
      361 gaagtgttgc caagtagttt tctctgctgg ctctgttgta cttaagtgca gctggatgaa
      421 gattaaccac aaagggaaca gcttgtgttt tatgtgaagg ttgcctttga ttgattaaaa
      481 aaatattcct tggtacttta ttttattatc aaagagggtg cactggatta tcaatgttac
      541 agagagccac aaagtccaca tgccgtaaac tacacacacg tttgtacagt gtagaagccc
      601 agtgacttag cttcacattc agaaaattca cagatttatt ttgtctcaat accacaagtt
      661 gccataataa aaatgaattg attttaatgt gactgtcatt aataaagtct gtagagattt
      721 aagcacatat agcataattt aatgtccac
//
LOCUS       KCKM01003315             765 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52053apa ultra-conserved element locus
            uce-181, sequence.
ACCESSION   KCKM01003315
VERSION     KCKM01003315.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 765)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 765)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..765
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52053apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>765
                     /note="ultra-conserved element locus uce-181"
BASE COUNT          200 a          179 c          174 g          212 t
ORIGIN      
        1 tatttactat tttgacccac ttccaccacg tcacctgctc tcttcaggga actgttttca
       61 gccagtccga gccatcaggg tggtagttct ctagttgcaa ggggtagcaa cacccactct
      121 tataaatgct gacttgtgaa cgctcgtgtg aggttctgtc cttaaatcta ttgattgctc
      181 aagagtcacg gtagcgcgtt tccccggctg aagttgcaaa gtccccagtc tctgggttgc
      241 ctgctgcttc cctgttagaa ttcagcgtgc cagacccacg gcacccctgt ctttcatgaa
      301 tggaattcaa aaagacactt acatttccat aaataaatta ggaattcagt ggcttcttcc
      361 ggctaatcag ggcaggctga taaaccttgc tagctgttta ataaatgaat tgtgactgat
      421 tacctattaa tatggacgcc tcaagaattc accctggggg aagcagagca gtgaaataga
      481 gaggggcatg gccccttggg aaatcagggc ttcatgtttg cagcttaaat atctctgtga
      541 agtatcaata aggaggtaat tgaattttga acacaaacat gagcgccgga tggatgaagg
      601 agaggggggc tctgatcatc tcttcatgcc ccttcatact cccctcccct tccccttaga
      661 gaccactcta gtgaagatag atgctaaatc cattaaataa agattagact ctgtcgtggt
      721 agaaaatggc agcttagcta gatccctggg caaattggga ccttt
//
LOCUS       KCKM01003316             556 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52067apa ultra-conserved element locus
            uce-1484, sequence.
ACCESSION   KCKM01003316
VERSION     KCKM01003316.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 556)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 556)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..556
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52067apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>556
                     /note="ultra-conserved element locus uce-1484"
BASE COUNT          185 a          108 c           90 g          173 t
ORIGIN      
        1 caaaccttct gatttgggta tgatatgtta aaagataaac gtgatttgag caagttacta
       61 aaaaagattt aatctatatt ctactttttc attctgaggc actaaaagag caaaaaagaa
      121 atataattat gagaaataaa ataaggattt tcttagttac aatccctggc ccttcactga
      181 ttgcagtaaa ttataaatta tgcagtcaat gtaggccaac aaaagaagac atcttcaaat
      241 ctcagtcaaa ggtaattact taagtcggct gaatgttccc ttttcataga gtgtgatctc
      301 tctttgacag ctcacactga cagatgacct tctcagcaac gttcttatcc ttcggatcat
      361 gagcagtgtg cctctctccc tgaatatctc tatatatttg tgacactaag ctttcaaata
      421 cagctattga caaatcagaa catcagtcta agtgctggtc ttcctatcac tcacaataaa
      481 gtagctatca cttgtggtgt tgtagagcaa gcacatctct gaaaaatgag ttctcaccaa
      541 gtgctaattt gacaca
//
LOCUS       KCKM01003317             515 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52083apa ultra-conserved element locus
            uce-2579, sequence.
ACCESSION   KCKM01003317
VERSION     KCKM01003317.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 515)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 515)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52083apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>515
                     /note="ultra-conserved element locus uce-2579"
BASE COUNT          170 a           94 c           68 g          183 t
ORIGIN      
        1 tgactgccaa cgtttagact gcccaagatt agcattatga agaaacatat aatgttcacg
       61 tcaggaatgc ctcctgcaac taactttctt ttaaatgatt taatacaact ttcttttgtt
      121 tataattcta gtttgaaatc aagaacatct acaaccccaa gcatcaatgc tcttcaatat
      181 ctaatttcac agttttctta acacatatct catgttattt attatactca gtgtcatccc
      241 aacacctttg tctattcttg ctacatttta aatggtttag ctggcaagcc atcaatcaca
      301 aatcatgaga catattttaa cttcaactaa gatcagttta gaaagaaaac aagtctttta
      361 tgtcctaatt gggtacatta ctcacatcta tgagtgataa atgcctgttc tggaaaagaa
      421 aactttttgt agagttttgg tatatatcta tagagagaaa caaaattttc agtttcttta
      481 tagagcaaca taatttttga taaatccagg gcttt
//
LOCUS       KCKM01003318             841 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52098apa ultra-conserved element locus
            uce-3288, sequence.
ACCESSION   KCKM01003318
VERSION     KCKM01003318.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 841)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 841)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..841
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52098apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>841
                     /note="ultra-conserved element locus uce-3288"
BASE COUNT          123 a          254 c          287 g          177 t
ORIGIN      
        1 ggaaacggcg tgagtttcag gaatggtgga acaccctgga agcagtgctg acctgtcgct
       61 ggcacagaaa gagctggggg acccactggg gctctcctgc agcccccagc gctgagtgcc
      121 agcgcccgct gggtgtaggg gtgctgggtt gagccgtttc ctgggatggt tggtgtgtgc
      181 tggggcagac gtggtggggt gcagttgcta cgagcctgca gcctccgctg cgaagctggt
      241 gttatggcac agcacaggct gcgtcttggc tggagggggt cccgtgtccc tgccagcccc
      301 caccgctcct ccttcacagc gccactgccg ccggctctgg tgcaggggct cctgctctcc
      361 acctctctct gtgtcctgcc agtggtttta ccctatggta ggttacgtca tgctgttcta
      421 ccacagggta gaaccacgga cgggatgccg gggctgcctc cgcgtcaaac gactcccatc
      481 tccccacaca gccaggaggg cgcccgtccc gcactgcttt gagctcgaga tggggcttgt
      541 gggtgtgtgt acaacagagt gtgcgtgtgt acgatggtgt gtgtgtgtgt gcacgcatgg
      601 gacagcccgg gtggtgcctg ctgggatccc cagtgctccg agcggggtct ctggcaacct
      661 ggggtgtttc ttcctggggt ctccagaagc ccttcacaaa ccacacatgg aggatgccct
      721 gcttgcaccg gcaccctgag gagatgggtg tctgctttgc gtggggtgtg cagggaaggc
      781 acgtggctgg ggtccagccg ccccacgcag cccctgggca cccctcaagc tccctgtcac
      841 c
//
LOCUS       KCKM01003319            1232 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52114apa ultra-conserved element locus
            uce-255, sequence.
ACCESSION   KCKM01003319
VERSION     KCKM01003319.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1232)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1232)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1232
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52114apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1232
                     /note="ultra-conserved element locus uce-255"
BASE COUNT          429 a          258 c          213 g          332 t
ORIGIN      
        1 agaacacact gcgtagcagg actggctgta acatgcacaa atgtaacatc ccctgcaatt
       61 tgaacaagcc actcccctcc tgcttcaaga aggtagcact aaatctaacc cttttgcttg
      121 taataaacaa ctttcccaac cagagagtct gcctgataaa aataagactc caaatattga
      181 ttttaattgg aatgaagtgc tgcaacatta tgcataaagc tttagtgaag tggcaattta
      241 cctaaggggt ttactgattg aaaagctctc aaacctgaaa tcactagaga ggtagaaaga
      301 aaaaagggac tctctgaggt gggggtggag gctagactgg taaaacaaat ccctctctac
      361 aaatctgaag cagatgttag tgtagaggga agtcaattca gcaaggtaca atcagcttta
      421 caaaaattat tctgttaaaa gagagcgggg ctcttgaaag agctaaatgt ttttctgttc
      481 atttgccata ctaaggaatc ttcaaggaga ctggtgttgc aattacaact aatcctcccc
      541 aaaaaattaa ctgtgttgaa ggctttgtaa tttccctagg tacaatttag ctgtcactta
      601 ctttaaaatt tactcaaaca tgcgttcgga acagcactaa cttcacatgt caagtgcttt
      661 ccagccaatt gagtctaaac tggaagtcgg tgttaaacaa ctgaatgatt agacaagata
      721 gctcatttcc ctgctctttt gttcagaata aaatgccaca tttacattat cagactcaac
      781 aggattttct gacagaggga gaaaaaaccc tagtgaacac tgtccgtacc aagcacatga
      841 agcctgtcat ttaccaatca tccttcaaaa agcaatagcc atgaatgtaa cttaattacg
      901 acccaacgat ccttgacaaa aaatcatctt atcactgtcc tgtccccata gggcaaatga
      961 gacacttttg tcctttggca ctgatgatgc taaattccta attgcaataa tggagtaaga
     1021 gagccaaata tccctaattt cgttgcaaca catacagagt tgtaatacaa atatttgaaa
     1081 taaagccgat aaaaaccaga aaaacatctc cccactagag atatttcccc ccaatgccag
     1141 aaatatcacc taatctagag agatgactat ttgtaaaagt atatttcaaa tccacttaac
     1201 ttccatgagc taaagattca tctacaacaa aa
//
LOCUS       KCKM01003320            1087 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52129apa ultra-conserved element locus
            uce-3897, sequence.
ACCESSION   KCKM01003320
VERSION     KCKM01003320.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1087)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1087)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1087
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52129apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1087
                     /note="ultra-conserved element locus uce-3897"
BASE COUNT          352 a          240 c          168 g          327 t
ORIGIN      
        1 tcctcctaaa agcataagcc acttaggaat aaacttccag tgttccaaag actggttggc
       61 tgtcagagaa ataaagtttc tagatttcac ccttttcata gcgaggcaat atacttgaca
      121 gtctttattc tacatgctag aggggaaatt ttatttagct tacctattca atgatctata
      181 ggagcagaat atacatacct cacacttctt actctgaaac actgagcttc aaacgagtta
      241 gtccacagct gctgaaactg tctacagttc agcatggttt ttgaaagtgg tatgaacata
      301 tatgagtaaa ctttaggtaa ataagcattt gttttctctg aaatgcaaag acctttgatt
      361 tttgtgcttg ctaggtgtga tccagccata gccagagcaa accaatccac attgccctac
      421 cactcacctc aaccttgacc tggagattaa actcactttt attgcacaca aaggtcatct
      481 gcgttaggtc aaaattcaaa gtcccttgtc agccaaggtt gatatattcc aacctttcct
      541 actctaatgc atcaaatttt tcatggtgag gtcatattca gcagacagtg tattcagcaa
      601 tttatcgtgc cattgtaata tagcctagaa tatgactgtc cccaaaacaa cacatgaata
      661 aaatattttc ccctctgatg tggcaaatct cctctgctca taaagcttca acctacagtt
      721 gtttccaggc ttcagaagaa tgacacagta tggacctgtt tccaaaatac aatcaggaat
      781 tacaattttt atcatcattg tccttaagca taagcaacat gaatacaagg gtatcttgaa
      841 atccacaagt caattaaaat gcacatatgt ttagtgttaa aacttccact tcatccttct
      901 aacaaccacc ataatctgcc ccctaaatct acagacatct gttggcctat ctgatgacac
      961 taagcttgct ttagactgaa atacttagaa aaaacagtgg cacaagactt acattcctat
     1021 gctaatgttg attaatacaa ccacggaatt tgtgaagtcc caaaaagcac aatcaaattt
     1081 aacttca
//
LOCUS       KCKM01003321             678 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52160apa ultra-conserved element locus
            uce-2384, sequence.
ACCESSION   KCKM01003321
VERSION     KCKM01003321.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 678)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 678)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..678
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52160apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>678
                     /note="ultra-conserved element locus uce-2384"
BASE COUNT          162 a          170 c          174 g          172 t
ORIGIN      
        1 gtccctctgc cgcagcccgg ctttcatccc agccccaccc aagccagcag ctctgctccg
       61 cagaggagag acgcagttcc gctcgcaaat ggcaaatgga agataaacaa gtgcagagat
      121 gcgagggttt ggcaggaggg agcctcctcc ttcgtcagct tccccgagcg tcctctcctc
      181 ccacccaggt ctcggcgggg cggtacggcc gggcaggagg gaccgtggca ccgtccccct
      241 ccgggagcag gggagggttt cctggtgcaa ccctggatca cggagccata aaggtcacgg
      301 ggggaacatg ctgggatcct tctcttcagc tcctgtaatg gtattagcaa tgactgtttc
      361 ttactcaatc atactcccaa aggattttca ataaactttt tatgtgccat aactgttaca
      421 ttaaataaag ctgaaagtat tgagtaaact gactgtaaat cactttagat gccttggaat
      481 tacattaagt gtgagaatta tggatctttt gctgcttgca gaaacagaga gatgacagag
      541 ccagaaattt ttatgctgcc aactcttttg aaggtttttt taattatttt ttgacgccat
      601 acaagaggct tctcgtcctg taaatggctt gttcagggac atgatggggc cgagtaccat
      661 ccccgtggtg taggatcc
//
LOCUS       KCKM01003322            1108 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52175apa ultra-conserved element locus
            uce-52, sequence.
ACCESSION   KCKM01003322
VERSION     KCKM01003322.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1108)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1108)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1108
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52175apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1108
                     /note="ultra-conserved element locus uce-52"
BASE COUNT          335 a          209 c          233 g          331 t
ORIGIN      
        1 ctttctgctc tctaaaaaaa tcttggaaag cagatgcaac ataaaatggt attcagagcc
       61 tccaaagcca gcaaagagaa aaactttgag gagagctggt tctgaacttt ttcccatgcc
      121 tgtgaatcac gcagcccaac atattttttg ttgccgtggt gtaccgacgt tcttagatga
      181 gcagtaacca gtcctgcatt aggcagttac acaaggacaa gattaaacta gctgggagtc
      241 cctccacaga agatggtgag tgttgctgct aatattttaa gaagcctctt caggggtgtt
      301 acgttatgcc ctgatatctt aaaatgtgca aaacgcgtga aaagttgtga gtgcaagaaa
      361 gagtccccaa gtaccttaat ccttgtattg ataatatcac tattgggtta cacggcttta
      421 atcccagagg agttgtcgcc tgacattaaa ctgtccaaac agtatttata tctgctgctg
      481 ccctgcaaga tcacttaacc ctgcacagca gtttaaaagt agttaatgac agacccagca
      541 tgacttgccc cttatgaatg atcacagaag ttcgacctgt gctgtcatgg tttatggagg
      601 caggcagttt gtccatagcc tgcttcagcc gcagcaggta atttgaaatg aaatgagaca
      661 gtttctacaa gcagattgat ttgggaatct tgcctgttct tccctttgac ccttgacaag
      721 ttgacactac aaagattgtg actttaaaaa atgattgggt gcaaatacat ttaggtagat
      781 gatttactat gtgttaaagc aaggacagtg catttagaat ggagctgtga ggaaaggtaa
      841 ttgtaaactt taacaactca tgttttatgt ttctgtatct tattaattat ctgacttaat
      901 cttctgataa caggagatca agtactgtat ctaataaact gtatatgaga gtccacagac
      961 tctgcatacc cgtattcaga attttagcca tgcagtgata aatatatatg atttagaaat
     1021 gcagtgggaa tgctttcttg atagatctgc aagggttaag tctgaagatt aacatctgaa
     1081 tgtataggtt tcccaatccc aagatgtc
//
LOCUS       KCKM01003323             762 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52190apa ultra-conserved element locus
            uce-7004, sequence.
ACCESSION   KCKM01003323
VERSION     KCKM01003323.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 762)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 762)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..762
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52190apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>762
                     /note="ultra-conserved element locus uce-7004"
BASE COUNT          196 a          139 c          167 g          260 t
ORIGIN      
        1 gaatatgtgg aagtttcagc tgctgtattc tgtgaatgta caccattggc ttttttttcc
       61 ttagcttccg agttgtcgtt tgtccacaga atcgagtgct aaaataaata cattttcact
      121 gctggcagag agaacagagg agaaaggcaa tacagcaaca tggcaacttt caatcacttc
      181 ctgacttgtt aatgaacttt tttttttttc tcctcttttc taactgagac tttgcttttg
      241 agctacggtg ttttccccaa gccattttgt acaatgagat gctaacagtt gtttgtctga
      301 taaagcacgt actatttaga acacagatgt ttgattatta tttatttctc tctgaagccc
      361 gctaattcgg tcccaaatga tctttttttt tccttttgct taaatttaat ttggaatgta
      421 tgttgttggt aagtgacaga tagtttaatt attaatagga tcccgcaatg caatgcacca
      481 tagttttaaa gtcatctggg gccaaaccaa cactccttcc ttccttcctt atgcttctgg
      541 gattccttga agaatgcaaa ggtaattaca aaactcatga caaatctgca tgtgttatgt
      601 cctttcctca acatttgtgc ttgcctatgg ttttgcaaag taccgttctc gctacgaaat
      661 ggtaatgaat caggagagac ttctgtggtg gttgcttcct tgggagaacg ggctgtctgg
      721 ggagtgaggg gagggggaga gtggaggaga agaggagagg ga
//
LOCUS       KCKM01003324            1142 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52206apa ultra-conserved element locus
            uce-2385, sequence.
ACCESSION   KCKM01003324
VERSION     KCKM01003324.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1142)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1142)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1142
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52206apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1142
                     /note="ultra-conserved element locus uce-2385"
BASE COUNT          306 a          212 c          222 g          402 t
ORIGIN      
        1 ttcaagcatg tttgttaggg tgggaaagat agaggtaact cactttgtaa agtgtgcgtt
       61 cagaggggta gaaaatgtgc cttactttcc tttgaaaaag gggtgttacc tattgctgtg
      121 cagacatact cagaagcctt caggtgcttt ccttacaaac ttaaacaaat tcagcaaaca
      181 tttgcattct tgtttgtgct ttgctctcca gatctgtgta tggtggtaat gccaaaatgc
      241 acaaaacaga acatctaacc tcaaaattct gcacagctgt agttgtaccc ttgcttcccc
      301 agtgtatttt ttttttctac gctccttacc cattcaaatg taccttttat tcctaaatcc
      361 ctcttggttg tggcacagcc ctaatgtgca gctgattttt tatgagcaag atttcaactc
      421 ctgtccttct gtgtgttttc gcagccatgc ccggttacgc tgtatgtgcg cctgcaacag
      481 gtgtacattt tgcatctgtc agaacttcct caactcagac ttgctgcaat ctgtaaagaa
      541 caaactcttc actgcagttc ttaacaggtc cttaacttta tttactaggt accaggtgtg
      601 cttttaaaat aaagtttttt tgaaaaagca gttggttacc ttatatactg cagatttttc
      661 actccatatc cactaaagag gcagatactt taataactgt cattaaattg tcgaactttg
      721 tttaacttga aggtactttt gatcttttga gcttagtctg atgatttctt tggaacatca
      781 ccaatttagt catgattcag gcactttgtg attgcaaaat tactgcggag aaattgggat
      841 tgtgggtttt ttagggaact ggtaatggac atcaagtagt gtctgtaaac ctgcataatg
      901 tgtctcactt gagattttat aggtttgttt agtagtgagt agagatagtg cctcttaaat
      961 atcagttaca caaatatttt tgtaaaagca cggcttgact atgaccgcgt tttataacat
     1021 gttggctagt tgtttgatat ttgggaatga gcagaatttc tctgtgtgtg tgttatgctt
     1081 gatttgcaca aagagtgtaa acaatctaga acttttaaca tccaattcct ctgtcaataa
     1141 aa
//
LOCUS       KCKM01003325             899 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52221apa ultra-conserved element locus
            uce-7183, sequence.
ACCESSION   KCKM01003325
VERSION     KCKM01003325.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 899)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 899)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..899
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52221apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>899
                     /note="ultra-conserved element locus uce-7183"
BASE COUNT          285 a          141 c          161 g          312 t
ORIGIN      
        1 attgcatgtt atgtttcgaa aaatggattc cttgtgaaat taggactaga agaaattgta
       61 ctttactaca gtgaaactga tcttaagact tgctcagaac acaaataatc acttgttgag
      121 aaagattagt cattcactaa aatataattt tataaagaat tgtagcatgt ttcttttgtt
      181 tgctttttta aattgagttg cctattgaaa tagtctttag tagaagtttc actgtatatt
      241 aaatgtatca cgctgtatac tgtattggca tgtgcgtgtg gtttacatat gtgtatatat
      301 agtatttgca ctttagatca ggctggagaa attatacaca cgtgtattgt atgttctgca
      361 aacggcacac aatacaaacc tgataacctg tgccctttat gttttgagca ttatcatgca
      421 aacgtctttt gccaaaactc acattttttt cctattgcag ttgaatgcac atttgtcaga
      481 atgtattaat gccccaagta cctgtagttt taagcgttat ggctgcactt ttcaggtcag
      541 tatataacaa ttatacttcc caattgatga aagtctgcaa gtagaaccta actctttgac
      601 atgaaagttc tggacttctc tggtcttggt taagaaaaaa aaagtcatcc aggtgcacca
      661 agtgattatg cagcagatgt ttggttttgc attttaacaa taaacaacat aaaaaagccc
      721 acacattcct gcagtggttt gggagttcag ttattaggta caccttatcg aaatagaaag
      781 atgatatatt tgaagaactc ttaaacttag aataagagga aagacacttt tgttcttcag
      841 aaaatagact ggtagcttca gttgtttcta tgaaagcatt tattttcctg agctaagta
//
LOCUS       KCKM01003326             360 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52236apa ultra-conserved element locus
            uce-2656, sequence.
ACCESSION   KCKM01003326
VERSION     KCKM01003326.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 360)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 360)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..360
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52236apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>360
                     /note="ultra-conserved element locus uce-2656"
BASE COUNT          119 a           70 c           51 g          120 t
ORIGIN      
        1 gacatacctt atataagatt ttattcccaa cttcaaaagg agctacctag gtttgtttgg
       61 tgtctttact ttgaagaaaa tgtcttttat tacttatttt agtacaacac attaaaatca
      121 aatatctcct gtagcaaaac gattcaagtc cctggaactc aaataatttt ctaataaaaa
      181 atgcatgaga caaataaatg cactttatgt tccacaagaa aaggcagttt caacaggcta
      241 atgctcagag aaaattcatt ttatcaacca gccatttcat tctttggtgc tgttacaagc
      301 tccttgcggt tgctaagcaa ccataattca tcgtaccttt taatggatac tctgctactg
//
LOCUS       KCKM01003327             582 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52250apa ultra-conserved element locus
            uce-4170, sequence.
ACCESSION   KCKM01003327
VERSION     KCKM01003327.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 582)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 582)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52250apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>582
                     /note="ultra-conserved element locus uce-4170"
BASE COUNT          198 a           98 c          100 g          186 t
ORIGIN      
        1 caatttcagt aatcatttgt aatatgaaca agcatggcat ttgcaaatat catgatatag
       61 taaatcaaac ccactctgtg gcatcatatc tctcaagaca ggtcataaaa gaatcaatgc
      121 tcatgacaac cacacagtta catcctatat attgtttgta gaacaaaaat atctgtaaac
      181 atttctcttc atctgtttct tagctgcaat gtactacaga gatcttttaa atgtgagcaa
      241 tgcattatag aagatatgac taatctagag aatttccatt tgaaagagaa atgagtaata
      301 attgattggc cgagatccaa agtcacagtg gggttcaaaa agcttgtaag tgccctcata
      361 aaaatagaag ctgtatcaac caattgaatt taattatatg tgaaggtgat gagggagcta
      421 aacagcctgt aattggagtc caattactca gctggtcttc cataaaatta attcatctga
      481 aagtttgcca ttgtcccatg cttgaggcct gctgctggtt taattagtta atactgagga
      541 atcttgaaac attacattat tttgtcttta ttgccaatta tg
//
LOCUS       KCKM01003328             766 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52264apa ultra-conserved element locus
            uce-3338, sequence.
ACCESSION   KCKM01003328
VERSION     KCKM01003328.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 766)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 766)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..766
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52264apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>766
                     /note="ultra-conserved element locus uce-3338"
BASE COUNT          250 a          150 c          135 g          231 t
ORIGIN      
        1 ctctagaagt cattacacag agatcaatgt atatgttaaa cagaagggaa tgcacgttaa
       61 cttaaaagcc acatgtcacc agtttcatta aactaaacaa aagcatcacc acaatgagtt
      121 tagtcagact tttgcaggct tcacaaccaa gctgcaagtc gcaagcattt acaagcttta
      181 gtgagactcc cacaaaattt ccatatgccc ttatttacgc ctctctcaag gcatcagttt
      241 gaccacagtt aaataatctg tcacagaaaa actgtaaact ttttgaaaaa gttctggtta
      301 ttataatatt tctgcattta tattccatca catcagtatt aaaggctttc agttacactg
      361 cttctgggga taaaaagcta aaatgccttt gctcacaggt gcattaaatc ctattaaaga
      421 atcttcctta tagcacatac ctcattactg catacaaagg cttggattat aaaatgaagg
      481 tgaagtgtac aaagtaagat ttgatattac ttggtgtgca tatgctgaag tcattaggtt
      541 ttacaccgta ctcgaatgat agtaggtttc atattcctat tgagttgctt tcagtagtca
      601 atgcttctgg gtcaagtagt ctgacatggg gtgatgtgtc tcaatacagg ggatgagaaa
      661 acttctttaa gcagctttac acaatgacaa gtgcacttcc ctccacagct ttattatgca
      721 atataagcat caggtcatag aacagtccac agtgtaggga tcaaac
//
LOCUS       KCKM01003329             332 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52278apa ultra-conserved element locus
            uce-2796, sequence.
ACCESSION   KCKM01003329
VERSION     KCKM01003329.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 332)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 332)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52278apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>332
                     /note="ultra-conserved element locus uce-2796"
BASE COUNT          116 a           57 c           41 g          118 t
ORIGIN      
        1 tctatcacta ttgcagtggt aacgtgcagt atcaattgga ttttaaaaga catagatctt
       61 ttatattagc tgtccttttt tataatacct tttacaaatt taatcaatgc attttaatat
      121 acaatatagt ttaagtgcaa tatacaataa atattcaagc ttcatcttaa acatgctcta
      181 gcctttaaat tgttaaaact gcagtgccct ttcaatctac ttacataatg tcataaaata
      241 tacatttcaa ggtaaatgaa gtcagctact tcaatttagt ccctcaaact ggtagtaaat
      301 gagaggttaa cactatggtg ccaaacccat ta
//
LOCUS       KCKM01003330             797 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52293apa ultra-conserved element locus
            uce-5244, sequence.
ACCESSION   KCKM01003330
VERSION     KCKM01003330.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 797)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 797)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..797
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52293apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>797
                     /note="ultra-conserved element locus uce-5244"
BASE COUNT          212 a          177 c          180 g          228 t
ORIGIN      
        1 tatgaacaca ggaaggtagg agttgacagc acacagcctt ccagacaatc ttttttcagt
       61 tgttatggag tataataaaa ttttgttttc ctttgcaatt tttccataat gtttatgttt
      121 gttttaggta acagattaac tgtaggtgac attttttccc atatatcatg tcatgtgtcg
      181 gaagccctca ttttacagct agcgtgggaa cagtgaatga gattatagga gggaagagaa
      241 agagacagcg agatggccat gtgggaagac catacctgaa ttgtggatgc aatactgtct
      301 acatttatac tgctgttaaa acttgctccg agtctcatta ccttaccata cccctggtgt
      361 tcccctgctg cctgctttgc tttacttctg ctgcccgtcc acctaactcg tgaaatgcta
      421 aacaagtttt gatgtttacc tgttcgtgat taaattgcaa aatgatctgc ttcgttctgt
      481 tccgaattaa ggtctgcatt aaatgtcata gcatttatct ttcgtaaaac gagacagcaa
      541 ggacactaat ttcccaggta ctcaatcacc ggcccatgcc actggagagc ggctcgggga
      601 ggagcgtggc cgccgttcgc agcccgctga cagcgcccag gcggaatcat aaaagtcaat
      661 taatcattaa aagctgttac cagcctgtat tgaaccgctc tggcacaaaa tgttaatcag
      721 cctcacatcg ataccataaa ttcctgcaaa ttggagcggt cgatagcgcc gaggcccggc
      781 ggatcgatgg gagggcg
//
LOCUS       KCKM01003331             663 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52309apa ultra-conserved element locus
            uce-7892, sequence.
ACCESSION   KCKM01003331
VERSION     KCKM01003331.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 663)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 663)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..663
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52309apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>663
                     /note="ultra-conserved element locus uce-7892"
BASE COUNT          218 a          130 c          140 g          175 t
ORIGIN      
        1 ttcattcgtg ctggagttaa ctatgctgat aaacacccag aaagtttgaa atcttaaaaa
       61 aaaaaaagga agagtagcta aataatcaga tgtaaaggtc atggagtgta agtacagctt
      121 ggaaccggtg aactatccga cccaggagta aagcagccag aaataaaaaa aaataaaagg
      181 taacagattc agcattgtcc aaaagttcca gaccagtgat taatgtgcaa gataatggac
      241 ttgggaaatg agtaaacact cccgtgctcc ctgctttgtg cttgaatgac ttgatgacaa
      301 gggcagagca aggtgagaat ttaagcagga ctacaggaaa agagacctca ccacagcagc
      361 ctgtgagggg cggtttgccc agttgcctta gtgcagtgct caggacctcc tcgggcacag
      421 gccccaaaat cagtaattcc aaccttcctg cttttaaaat ttgcaataat tacccagtct
      481 tctttttaag aagttgcatt tgggctaagc ccgaaatctc ggactaatct gaggtagtac
      541 ttgttttaaa actttagtcg cgggtactct gaacctttga ttcgtttccc cctaaattga
      601 ctattcgtaa agaactctta aatgatcttt taacttaaac taaataatta atttaagcgg
      661 cgt
//
LOCUS       KCKM01003332             800 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52324apa ultra-conserved element locus
            uce-7897, sequence.
ACCESSION   KCKM01003332
VERSION     KCKM01003332.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 800)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 800)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..800
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52324apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>800
                     /note="ultra-conserved element locus uce-7897"
BASE COUNT          213 a          152 c          154 g          281 t
ORIGIN      
        1 aatcaagatg tttctttcct tttcagtaat ggatttcatg acaaatttct acctttttcg
       61 ctatagcaag tggaagtagg atcagcataa ggcagctata ccataatcac tttgagctca
      121 ataaggagat ctttacaggc aactttgttc ttatttctta gagggattaa gaagctcagc
      181 tctttaaatt cttgcatata acactgacat ttccagggtg tgtttggacc agggagttca
      241 aagagaagga ataaaaaaga aaagccaata tgactttgtt ttttaccttg ctggaggagc
      301 tgtttgtgca aatcgcctat aagcttattg acctgaatct ttgactcctt gttttctctg
      361 gatttggctg gagtgtagac actgatagag cactgataga ggtgattgca cagccctcgg
      421 ctttgcttgg caccagacaa ccccctcccc ctatgcctga cattatcttt cactggcaat
      481 acttctgttc tcctggagct catgttcctt tattttattt ttttttaatt taattcatta
      541 cattttcttt atgtaggctt tctgagtaaa ggaagggcac attaattttt tttggtaatc
      601 agagacagga gaggacatgt atgtgtgatg ataaactttt atcttctagg ataacaggaa
      661 tctgcataag aactcacagt gctactcctt tcaaaaacac aatagttacc tcttactgag
      721 ttgtgtacat gtttgtgaac ctgtattgga ttcttgtgtt ccccagtgtg agacttccca
      781 gatttttatc tgtatcccat
//
LOCUS       KCKM01003333            1104 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52338apa ultra-conserved element locus
            uce-3186, sequence.
ACCESSION   KCKM01003333
VERSION     KCKM01003333.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1104)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1104)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1104
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52338apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1104
                     /note="ultra-conserved element locus uce-3186"
BASE COUNT          247 a          252 c          309 g          296 t
ORIGIN      
        1 tgcgcgcgtg tgagcagcgc tgttcacgct gtgtcaccag caaaaagatc ccgagcacta
       61 ttcctccgat ttccacgtaa attaaccgaa actaagtggc tggtccttcc catcagtgtc
      121 atcaggtaag ctcagcatcg ggccgggctg ctgcaagagt gggacaaagg gctgatgcta
      181 cggtccggtt tccatggcaa cagaggaggg gtagtgaaac cagaaatgtt gcaaacaccc
      241 cttctgctca tcgcagccca atgcacacta gtgcaaaaga taactgctat ttggggggag
      301 gggagaggat tccaaacaca tttacctttc agcttgcaga gtttctgaaa taaaaagaaa
      361 cggcaatttt tcctgttttt ttttctcaat gtagctgcga aaagaaagga aacgcgatgc
      421 gcaggcctcg ttttctgcgt gtaaaatgtg tgtgttcttt aaaaggcagt ggttggctgc
      481 ttttccggac atgatgtggt tgaagctgtc atcgtaatgg aaattcattg ctgtagctat
      541 ggtaaatcga gttttctgcc tgtgctgaat gcattagtct aatgagatgt ttgcagctgg
      601 agagctgagc tgctggagac ttgcactgtg ctaagagaca gggagaagac ggcttttgcc
      661 ggggtctgtg tgactgtgct gaaagtcctc tgccctttgg gtcccaatgc ccgggctctc
      721 taaagacact gctcagtgtt ttaacctaag caataggtaa ggggaaagca tgcttcttct
      781 tctctgcctg atgtttgtcg gtgagccttg ctggagcagc tctcgttctg cttgtctgga
      841 tggcaacttt acagctcctc agtcggagac tcccttcacc catgtacacc cttactcagc
      901 cctgggagca gctggggtga ggagaggagc agcggatcag ccggctcgtg ctgcgcggaa
      961 acgcctgtgt gtgtctgcgt gtgtgtgtcc atgtgtctgt gtgtaatagt tgatgaagac
     1021 tcccgactac agagcactct gcgtgcaggg cggcttcagg cttttccaaa cctgaatcta
     1081 agcggggtgg ttttattgct gcca
//
LOCUS       KCKM01003334             992 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52352apa ultra-conserved element locus
            uce-1970, sequence.
ACCESSION   KCKM01003334
VERSION     KCKM01003334.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 992)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 992)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..992
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52352apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>992
                     /note="ultra-conserved element locus uce-1970"
BASE COUNT          313 a          164 c          187 g          328 t
ORIGIN      
        1 ttattctact aggattattc tcctaagggc tttgtcattc cttatgtttt aaagttgtac
       61 atgtcatggc tgaaactcta gtttttcagg attctctcag ggtgactact gaatccagga
      121 agcgtatgtg taaccctgtg cagagttatg ttcttctaca gctgtcttgc agtgtgcctc
      181 cttgctaaac gctctgtagc tatcaaagca ggcgagaatg gcacaggact ctctaggtag
      241 cagggtaagc acgagcggca agatattaag atctttctgt taattcattg atggttttgc
      301 tggtatcatc ttctaatctt gtttaaaaaa gaataaatgt gcatttgaac atttctgaag
      361 aggaaattgc aaagcaaaat gtatgtataa tcctaacgtt ttggtagaaa tagggtgagt
      421 tattattgat tcacagagca cgacaaaaca tcactgcatg aattagcaaa cagctgtttc
      481 taatttgagt ttagaactgt acacagagga acttgtttta gtgttcactc ctttcattta
      541 taatgaattt taattaccgc tacaggtgag aaaaatgtag aaacaagctt gtatcttgtg
      601 gaagaaacaa aggagagaca gatgctaaca gatttacagt ctgtgataaa aggaatgttt
      661 tggtacactt tacatgtaat tagagtgcag ctgtttttag tcccaagtcc atgatgcaca
      721 gcagaatata gtatctactg cttttccgaa gggagtaaag aaaaacagtg attcaaccct
      781 gcaagcattt agtttattcc tagatctaac ataaaacttt ctcctccacc ccttattatg
      841 ccatttattg aagtgtgaaa taacttattt aatgatatgt taattttttg ttaccagcaa
      901 aatacagact ctctgacata agaaaaaata aagttaaaaa taactttctg attttatcat
      961 ctgtacagaa ttatgtatca tcctattgat gg
//
LOCUS       KCKM01003335            1116 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52367apa ultra-conserved element locus
            uce-2998, sequence.
ACCESSION   KCKM01003335
VERSION     KCKM01003335.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1116)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1116)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1116
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52367apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1116
                     /note="ultra-conserved element locus uce-2998"
BASE COUNT          335 a          202 c          206 g          373 t
ORIGIN      
        1 aaatagacac tgaattatgt gttctgggta aaaaagtaca ttttttaata ctaaataaat
       61 atcactgtgc ttgaggcatc atatactcct acataaggtt ctttttctgt catctgatca
      121 tggattctcc tagaatccaa tgtatcagaa ttgtagagaa tgttattgca attatggata
      181 caaatactta tgatggaatt ttattttttt tgtccattct gcaggtgtgt gctctgtgac
      241 tattttgatt ctttcctctt acttatcact gcataaactg aaaagtttta agctggtaat
      301 tgttaaagtt cacaaacaca atatttttat tcttggcaag gaagaggggg gaaaactgaa
      361 ggatttttca tgtctctcag atctattggc ctattctcca aatgacaggt tcctgactga
      421 tcaactatac cacctgctac taaagctcag taatattagt ctgtgcaatg gtttcattct
      481 catctcacac ctcagagatc ttgagctcaa ccccaggcat cccctgtgtg tttaaatcag
      541 cttaacggct catatagtgt gctgatttcc ttgtaggcct ctgttttctc aaaaagtgat
      601 caccttttgc caatgccctc aggattaaac agggcagtcg agttttcctt ttctgcattg
      661 gctatacctt tgtagtcaat aaaagactaa ctagaaaaga atcagctgat gagagaatca
      721 atcttctgga agcctcccca cagttttctc atcatttttg tgctgtctgt catctcagat
      781 tgtaaaatgg aaaccaaaac tcagtatgtg ggaagacttt tagtgctcct tgttaacaaa
      841 aacagtaaga ccaggggttt tgatcttatg agtgtatagg taaacagtaa gctgtaagtg
      901 tgcactcttg aagtagcttt tccatgtttc taatggaggt ctgcaaaaaa attatcaaag
      961 aagtatcaca aaggtctcat aacatactgt agtgtagata cccattctga gtaggtcagg
     1021 ttaaatctga agttctttat aacagtacgg gggtatctta cagaacagct gtaccattta
     1081 ctatggtata aaagctgtat aaataaaaaa ggattg
//
LOCUS       KCKM01003336             744 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52382apa ultra-conserved element locus
            uce-765, sequence.
ACCESSION   KCKM01003336
VERSION     KCKM01003336.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 744)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 744)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..744
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52382apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>744
                     /note="ultra-conserved element locus uce-765"
BASE COUNT          179 a          184 c          153 g          228 t
ORIGIN      
        1 tcctcggtgt ggggaaggaa ggacgaacgc ttgggctcgg aggggaaaaa gaaggagcag
       61 cggcgggttg aatagcgcct ttaaattact gctgacacct ctgttacagc tccctaaaat
      121 ctcaatcaac aacccattag aactcgacgg gagtaaaact aaatcctcgt ttaagtgtat
      181 ttatccgctc tcttttctct ctttcaaatg ctaaatccat ttcagcatat gccccttctt
      241 tctctcgcct ttctctaaag actggcagcc cctactactc ttgtaaatat gaaagatgct
      301 aatcatatga catatcacgt ctcagtcgga gcctggaata aagccttgag atttgggatc
      361 attgcctcca gacaacagct tcatcagccg gaaagttggt ttttttctcc tttccttcaa
      421 ctctcaatcc cttctttgtc tggaggaaaa tgcagccaac tcgagccacc ccggccatat
      481 ggttcactct gtgttttctt agttgaatcc tgaattgttt gtgacttgcg aaggggtttt
      541 ttgttttttt tagaagtgtc tataaagaca tagaagaggc tgcctgtacc cagggtggct
      601 ttgcagggtt gctccatgtt cttcacatgt tggtttcgca cactctttct acggccactt
      661 cactgctaca gctctgccca agagccaaaa gagcaagccc aaccaattcc ttgcatctta
      721 ctttttttcc ctttgatgga tgga
//
LOCUS       KCKM01003337             243 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52396apa ultra-conserved element locus
            uce-5214, sequence.
ACCESSION   KCKM01003337
VERSION     KCKM01003337.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 243)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 243)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52396apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>243
                     /note="ultra-conserved element locus uce-5214"
BASE COUNT           84 a           31 c           38 g           90 t
ORIGIN      
        1 ttttaaaatg acaatcaaag aaaacttact agagttatgc taaactacag aattttcttt
       61 tttatttgtg ataagtgtgt agagccttaa atcacatata ctgtaagtta atgactaata
      121 ttctaacttt gtttggttaa tgtttgcagg gcacttacag atgctagaat aatctctaat
      181 gtttttgctc aatctgctct ggagatggat gaaataaata gtttaaacta attaatgtaa
      241 cac
//
LOCUS       KCKM01003338             872 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52411apa ultra-conserved element locus
            uce-5176, sequence.
ACCESSION   KCKM01003338
VERSION     KCKM01003338.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 872)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 872)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..872
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52411apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>872
                     /note="ultra-conserved element locus uce-5176"
BASE COUNT          257 a          184 c          163 g          268 t
ORIGIN      
        1 gttaaactga tcttaaggca aaaacatatc tagttaaata gttctatttt tctgcaaatt
       61 ttaatacctg cttttctcaa agcccagaac aaaactgatt ttctccccca ctggtgagtt
      121 ttgcagaata attagggaaa atcttccaca ggcacagaat gttggctctt aggcagtaaa
      181 cacggggctc cccccgcttc tttggagctt tttagaggct cagtatgctc caaactttgc
      241 acaaagccca gcccgaggaa caaagcctgc ggaccaccac ggggaagtgg tattagccct
      301 ttccacagcc ttcccactgt ggatgcatgc tcagttcctg gataaatgca ccttttaaac
      361 tatattaatg taaaagtttt atttgaaaga tgccagctgt ggtcctagcc caggtttatt
      421 catgtgggac atttactggg tcaacttaat acttgactac tgcttattat cccatcagtc
      481 ttcggggaca acccatgatc taattgccca gcatttatgt tgccctggca actataaata
      541 cagagtaata atccttaaag gggcagtgta gaatttcatg cccctgcagt gaagtacact
      601 tcatttccca gagcaccctg tgttttttaa ttcagtgaat aaaaatgtgt aatgaataat
      661 taattatgtg cttggaggca caatagctgc ctacttttga atattcatca gtgacattat
      721 taattcacta gaaatcccaa ggagcagtgg gataggcttt tagcctagct ggaggactta
      781 cagatagtat tctgcaacat gaacaaactt ctgcaagcag acttttcttt tgcagagttt
      841 taaaaattta atttacatct taatataata at
//
LOCUS       KCKM01003339             608 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52427apa ultra-conserved element locus
            uce-3913, sequence.
ACCESSION   KCKM01003339
VERSION     KCKM01003339.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 608)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 608)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52427apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>608
                     /note="ultra-conserved element locus uce-3913"
BASE COUNT          211 a          107 c          114 g          176 t
ORIGIN      
        1 aacttaagga agtctcagga ggtagcagag aaaaatttct atcgactcaa ctgaaaataa
       61 gttagcaaac tagacatcaa gttccacttg acctaaacta tcagcaacaa tgaaagctat
      121 gtactcacat tatagactac gcccttatgc atagtattct gtgtagaaga tactgtatca
      181 gtcacattgt aaaagaccta gatcaactta aaaaaataaa atccaataga atgattacag
      241 ccgctgcata gaatgacaag tattatcaac aaaaattaat caggcgcatc ttttagtgaa
      301 ctcaattaat aatgtgcaac aacagggtct cttttcttaa gatgaaaatt aattagtgga
      361 gggaaggtca cttggagatg ctgacatcac tcatcagaat gctctggcag ctctaattat
      421 ttgtcttcca ggcttgggtg atcagaaatt attgcaatac ctgagcaaca ttttgaaaaa
      481 gctttgtgca tggctctttt aattagacct ggtatttgat taatgcagtg gaagcattca
      541 gatcagcctc ttatcattga gtgacttaga agttttaggg aattatactg tgcaagaccg
      601 ggtcacta
//
LOCUS       KCKM01003340             267 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52442apa ultra-conserved element locus
            uce-6593, sequence.
ACCESSION   KCKM01003340
VERSION     KCKM01003340.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 267)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 267)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..267
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52442apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>267
                     /note="ultra-conserved element locus uce-6593"
BASE COUNT           93 a           40 c           44 g           90 t
ORIGIN      
        1 gtgcagaaga aagaagcaaa agcataaagt attaaacttt catccagcac cataggagag
       61 atgtagttat taaatttcag ctgcttatca aactgatatg aaagtcattt tgcatgattg
      121 ctttgcatcc tcaaatcttc tgcttttatt tgcagtgcat ctctgcgctt tcttattaga
      181 aaaatactca aaggataaaa aagctgataa tattcagttt tgacaattag gtagaaaaaa
      241 cattttaaga agtgcttttt ttattgc
//
LOCUS       KCKM01003341             295 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52457apa ultra-conserved element locus
            uce-213, sequence.
ACCESSION   KCKM01003341
VERSION     KCKM01003341.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 295)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 295)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52457apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>295
                     /note="ultra-conserved element locus uce-213"
BASE COUNT           99 a           56 c           58 g           82 t
ORIGIN      
        1 atacaaccag ttgaaagaga gaaaaacaag atgcacgggt taaaaggcca aattgtgcaa
       61 gtgtgtgcgc tgagtgacag acattttagt actagcctgg gaccatattt taaaaggtca
      121 ctgaaaactt ttggcttggg ccctctgaca aacaatgaac tttccatata tttatttgcc
      181 atctctttgt ttttacagca agcagaataa atgagttaaa tgacgttgtg caggtctgca
      241 cattgtcagc acaggttata agtcattatt aaactccatc aaatcagacc aaacc
//
LOCUS       KCKM01003342             225 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52472apa ultra-conserved element locus
            uce-7076, sequence.
ACCESSION   KCKM01003342
VERSION     KCKM01003342.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 225)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 225)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52472apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>225
                     /note="ultra-conserved element locus uce-7076"
BASE COUNT          102 a           32 c           43 g           48 t
ORIGIN      
        1 agcctattgc ttttctctta agagaattat ttaatagaag ttgaacatcc aaacaaaaag
       61 ggtaagcaga gaaaaaatgc gaaatcatta aaaaccaaaa gaaccaaaga ttagaaaata
      121 accttaagta agaggaagag gttgttgaga cagcttagca gagacaaaag gcactgaaga
      181 acagaatcat ccatattctc acgctgtaag ataaggtaga taaaa
//
LOCUS       KCKM01003343             941 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52488apa ultra-conserved element locus
            uce-5016, sequence.
ACCESSION   KCKM01003343
VERSION     KCKM01003343.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 941)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 941)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..941
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52488apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>941
                     /note="ultra-conserved element locus uce-5016"
BASE COUNT          299 a          170 c          161 g          311 t
ORIGIN      
        1 tttctctaat ttcctgtctg tgtgttgtta catatgatta cacatttata gggttgctgg
       61 aatcaaaata cctatctaca tgaaagaaca caagcatttg aaaatggtat tcatgtactt
      121 gagtaagctt agaacacagg ttagcaatat ctgaaatgaa agtacaaatt gattgaaatg
      181 cacctcaaag ccagacaatg atatcttttt ttctgcttag atttacatct gatgttgatt
      241 attggcaggg aaggaacata agtggcttgt gtttacgtag tggggctgat ggcagccttt
      301 acttgttact atccttaaaa cctggagaac gagtttttgc aatgagactg caatggtaat
      361 gggaaacatg gctctgttct ctgatgctga gttgtgattg aaggcactga cctgccatag
      421 acttataata ggggagcagg tgtggcaatg atggacttta atttccttta ataaaccttt
      481 tatgtgccac acttttactg ccattctatg ctctccaagg tcctgcacat aataggttca
      541 ttacttttga ttactatagt ctattgagac aaacaactcc agaacacact atatattatg
      601 ttcagttaaa ccaatataga ctatttatcc actgtgcatt atttcacctg caactctaca
      661 gacaaaatta acaacagctc ctgtaagcta aaactattaa aaccactggt actcctttgt
      721 catcatttca taataaatac cacaccaatc acagtgctgc tcttttaatt atgaaacaaa
      781 aagtgttcac tgcttctact aagcagcagt tactttggtc taaatagcat attgcattgt
      841 gatgaatatt ttaaaactgc acaatgagtg aaaactaaca ataaaatcaa tgcaggggat
      901 ttttctattg attttctatc cttgcaataa tttgaaacta t
//
LOCUS       KCKM01003344             651 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52504apa ultra-conserved element locus
            uce-7393, sequence.
ACCESSION   KCKM01003344
VERSION     KCKM01003344.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 651)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 651)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52504apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>651
                     /note="ultra-conserved element locus uce-7393"
BASE COUNT          201 a          132 c          103 g          215 t
ORIGIN      
        1 atcagcctat aaatcctcct gtatttccca gtgtagttcc ttatgaaata aaactttttt
       61 ctctccattt gctcaactgt tttcaatact tgcagtcaag cctgaagttg tcaatcaagg
      121 aacagcttat cagtctgagc ttttcctttt caagcttata ctcagtgact tttgagacct
      181 gtcaacaccc agttgatttt agccttaaca ataaagtcac actctatctc ccacctagta
      241 gctttagatt aaattctgat gtcatatacg tcatatttac atagttaaaa ctcataacaa
      301 agcaacccac aggcaatagg atgtaataac catgcaacag agccatttcc tgtccccttt
      361 tttctctcac actatgtttc gtgtagttta ttggatgtga atgttttgaa aatgaaaatc
      421 gtctgggaga aaactgctag ccaggcgtga ggtttagaag aattcaacta aaagaatata
      481 tagagttgta aatgcttggc cacctctggt attgtaaaat agaaactctt tcaatattcc
      541 tttcatttcc acaagaagaa tagatgggag gccacaatta tgtgctccag cagtcgattt
      601 ttaatatctt taattctgct catattaaag gaaaacaatt aacttggagt c
//
LOCUS       KCKM01003345             687 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52519apa ultra-conserved element locus
            uce-3564, sequence.
ACCESSION   KCKM01003345
VERSION     KCKM01003345.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 687)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 687)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..687
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52519apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>687
                     /note="ultra-conserved element locus uce-3564"
BASE COUNT          199 a          114 c          133 g          241 t
ORIGIN      
        1 taactgaaaa tatgcatacc ttataaaata taaccttccg actttccttc atttattgta
       61 ttgattgtac agctagcacc aaggaaaaga actggttaga aacagcttca catgatgtgg
      121 ggaaacgtag cagtttgcag tgagataccg tgctgtttgt tcttgctgcc tgaatgccgc
      181 gatacactag gtcttcatca gaggagtggt gaataaaaga agatttatgt tcaaatcaca
      241 tgctttaaat atttctccta agtgctagtt tgctctttgg tgtttagcct gaaatttaaa
      301 gcactgagga ttaaaaggat tacaacataa tcttaaataa tcctaagtgt catttacaga
      361 gagatggttg taataactaa ataaaaccat gttaagggat ggcagtgttg tcagtcagca
      421 actggaacag taacagcgcc tatgtcagtc tgtcgttctc ctctttcctt tatttgactt
      481 agtttgatat tggataggtg cattttgatg agagttatcg aaaataacat gttagactgc
      541 ttttcagtca ttattaattt gacttctgag gcaccagtaa ctaggttagt ttacagattt
      601 ttctcaatat ttaatgtttt gtgcttttag tgaagttttc aactggagtt tattctttct
      661 cctggtttac tcatcctcta ctcgaag
//
LOCUS       KCKM01003346             520 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52535apa ultra-conserved element locus
            uce-1246, sequence.
ACCESSION   KCKM01003346
VERSION     KCKM01003346.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 520)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 520)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..520
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52535apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>520
                     /note="ultra-conserved element locus uce-1246"
BASE COUNT          170 a           92 c           78 g          180 t
ORIGIN      
        1 ctcacaaaag attaaaaaca tcctcctatt acatctagag acttcttttt gttattcaaa
       61 gacatgaata tatttagaaa aatgtatatg attttaatgc cttaaaccag aaagctacct
      121 tgattcccat taaaaattgg aatatttaat gtttttgctt cttctgtgac atttttttga
      181 tattgtgaag aagaacaaaa aagaattctg agaacatata aaacaaaaaa ctgtgtttga
      241 agtattataa taaaacaacc tccttctttt aatgctaagt ccctttttaa tgaagatcct
      301 ctggcagctc ttgaatgtat aactagttta tatcatggga tgaagctgtc tgttctgatg
      361 attgacatga gcccacatta caatgtgatt ctgaaaatta gtccatagag gtccttttca
      421 ggtactactc agactgagag ctgccctcca actacagtag agccttttta accccactca
      481 ttggtattct aatctggaag tgctgtcctg ctttttaaat
//
LOCUS       KCKM01003347             854 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52549apa ultra-conserved element locus
            uce-1154, sequence.
ACCESSION   KCKM01003347
VERSION     KCKM01003347.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 854)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 854)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..854
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52549apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>854
                     /note="ultra-conserved element locus uce-1154"
BASE COUNT          234 a          219 c          182 g          219 t
ORIGIN      
        1 ggggactcaa accaaccctt ctgcatcaca ggagcacccg atcttagcac gtattgcaaa
       61 cccaccacgt caacccctcc ttggtccacc tggttacagc ttccagggaa acggaggcaa
      121 aggagtctga tggatcaacc catcctgcat ccctgagtgc aggaggagga aagggaaaag
      181 actgccaaga acttgcagac tcttatcctg tactcccagt acaatcctcc gcttgttggt
      241 ttgccctggt aatgtgttgt tactcagcat tccttgttaa ataagaaagg gaggacagga
      301 ccctctgcac cgggacagag agggctgctc ctttaaagcc tctcctggat gtcctttccc
      361 tttgagatga ctatcctcga tccctttgat ttaagagttc ctctcctggc cctgacagta
      421 aggtatttct gtcccacaga ttataactca ctctgggcta ttattcaact cccaagccct
      481 ggccctgctg catttagtcc aaacataata tccttcatgc atatattatc tgtctcccta
      541 ttatctggaa tcatttcgga attaaatttc agtcctgcaa tattggcttg aagagcggct
      601 cgctttatgg gctagtcaaa ggttagaata ccaatcaaaa taacactgcc gatgcagaga
      661 gacattttaa tattccaaaa cccggtaatt gtaaaaggac ataatatttt ttccctgatt
      721 accccaaagg caacacatgt taacaaggca agggagagag tgaaagaaat ttcagagttg
      781 agacagctgc acgacagatt taaaggagaa gtcgtggtcg gctgccgcgc tccagccctt
      841 ggaagcacca cgct
//
LOCUS       KCKM01003348             791 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52564apa ultra-conserved element locus
            uce-256, sequence.
ACCESSION   KCKM01003348
VERSION     KCKM01003348.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 791)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 791)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..791
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52564apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>791
                     /note="ultra-conserved element locus uce-256"
BASE COUNT          259 a          138 c          200 g          194 t
ORIGIN      
        1 aaaataataa aataaaaata taaagaagta gggggggaag agaaagaaag ttaaactgtc
       61 cttgttataa ttgttaactc tgatcgctca agtagaagac gggctgatta aaactccaaa
      121 cgagccccta gctcgcttaa atctcagagt ccggaatgat agaatcagag gagtttattc
      181 ataccattaa gccccagaga acttaattga aagaagagca tagcctggac cttgacaagc
      241 gggaggtcac agtaattgct gccggacata tttaacatta agataatcag gccattaatt
      301 accctttgga tcattaaatc agccagttgc aaaatgaaat ttctgcctct attactcact
      361 tgagagacca caggggtggc ttttaattta tcagtgagct tgagatacaa aggaccaggc
      421 ttggggagga aggagagggg gagaaaggga ggggggtttg cttcagcaga ggcaggaata
      481 tcaatccgcc atgcttggtg atcgtggcaa attaactagg taagataacc tcagcttcta
      541 aaggcagaag ctgggggtat gtaaatagat gagggcagac agggagatca gagcctgcac
      601 accacttagc aggataataa aggaaatcat ccttgattat cagtgctaat ttggacactg
      661 ccggtagctt gttatgcgtg ttctgagtag catttaatta attcaattgc ttgttaatga
      721 gggaagtgac atgtggggag cagatgccac ccaactgcag atgggttctg gtcagccctt
      781 cacaataaaa t
//
LOCUS       KCKM01003349             961 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52580apa ultra-conserved element locus
            uce-4601, sequence.
ACCESSION   KCKM01003349
VERSION     KCKM01003349.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 961)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 961)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..961
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52580apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>961
                     /note="ultra-conserved element locus uce-4601"
BASE COUNT          232 a          218 c          224 g          287 t
ORIGIN      
        1 ctgagttgga aactccagct tattgagata acatttccaa cgcaaatctt gaacgtggag
       61 agtttggggt tcatcgctgc taattctgta ccatttgctg agtttcattc acatgctccc
      121 tttaagctgc tattattata attttctgat gccaattaat ttcccattcc ctttaacctc
      181 gctcacgagg gtacagtttt ccttgctttt gccactgctc gatgacagac catgtgtcgc
      241 gggacaatat gacaaaatta aacctgtctc tgatttgaaa caaataaacc gaaaacaaaa
      301 cgagcagaaa tctcggttgc cttttaataa ccagaagttt gtttattgaa aatatgtttt
      361 gtttttcttt ccaaagcctt ctccgacgtc caagttcatc cagggctact tgggagctgt
      421 cataagtgct gtctcaatag cagtgggtaa cgctttatat ctatatattt cactcctaag
      481 tagctgctcc cttgcagcag tactgcagcg cttttgagat gtttgttcca attgccaagc
      541 gtgttttcgt ttaactgacg ggatttgctc gacataacct gcaaatattt taactgcgag
      601 gtgtttctgt ccgtgcatgc ccaaactttt caacagaagg aaacttctac ctctgatggc
      661 ttccagcacg tcctgcgccg tggctttgct gctgggtgag ctcaaatcat ccacgcgtgc
      721 gttaactggt ggcaaattag ccaagcccga gttccaagag tggctttgag gctgcggagg
      781 gatagtggca gggctggcgt gctgagcaga ggcaggtttt gggagatact ctcctggtgg
      841 gtgcccacct tgggctgaaa aaacgctcca aatgacgtcg ttcacctgtg gatgggcttt
      901 gggctggaaa cggcgttcca gtcgtagctg aagcaatcag aaagaggaac ttctagcatt
      961 g
//
LOCUS       KCKM01003350             785 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52596apa ultra-conserved element locus
            uce-7126, sequence.
ACCESSION   KCKM01003350
VERSION     KCKM01003350.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 785)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 785)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..785
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52596apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>785
                     /note="ultra-conserved element locus uce-7126"
BASE COUNT          262 a          164 c          143 g          216 t
ORIGIN      
        1 agcttaaaat ctcatcctca tttcttccct gctcctaaaa ggaattagat tagagatact
       61 aatgtttaaa gagattagtt ccaaattctc tgtgcaaata gaaagtagca acagtacctt
      121 tcacatgcat atgactatac atatatggga tttcgcctgt atagactgtt ttcaacttca
      181 gtcacaatgc tgaactcttg gaagacatac attttattcc catcaccaaa gctccctata
      241 tattagctac ttacagagaa aatgggcagg gtgaacccca ctgtgtagag gacagtggat
      301 gtgatggtac tgtcatggaa cggatacttg atgctgtcat cattacagaa aaagcctctc
      361 tgatacggtt ttattttggc caagtttaga acaccaaggg gtaagccagc tgttggggga
      421 aggaaaacaa aaaacaaaaa caagaaatac atgtggttaa atcaaaaaaa aaaaagtaac
      481 agcacagctc atttttaacc atgcatggag taagctactg aacatgcaaa actcaaattt
      541 cctaagtatc atgcaatgca caaatcctgt ttattatctg ttccagaggt ctccttcaaa
      601 aagattctaa ggctgcccac caggtacaga agttaagaaa gtcacagttc aaagccgttt
      661 catcagtaag gtgagttgtc acacgctaaa ccaattatgc ttaagcattt gccactcaat
      721 tgactgaaca gttactgagg gcaggctgcc ttttgtcttc cctccttcaa taccactcca
      781 tgaca
//
LOCUS       KCKM01003351             795 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52611apa ultra-conserved element locus
            uce-6366, sequence.
ACCESSION   KCKM01003351
VERSION     KCKM01003351.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 795)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 795)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..795
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52611apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>795
                     /note="ultra-conserved element locus uce-6366"
BASE COUNT          177 a          218 c          218 g          182 t
ORIGIN      
        1 tcatttcaga ccggtaaatg cccctcactc cgccacagct ggaggttttg ggcttggtga
       61 gccctgcgag tccccaaagc cccgtgctgc cctggggaag ggggtgctgg gtgcggcaga
      121 gcgctgatcc ccccgtgtcc cgcagccagg ctagggggag gaaacccacc ctccagcact
      181 gtcggcagag ccagcctgac ccgagcaaat gaaaataatc aaaagtaatt agaagcgtgc
      241 tggactgctc ctcggagatc tgtgcgagag aataaacatg ccggagccct ccgagccact
      301 gcaaaggccc atgtctgagc tgttaggtgc cctgaccttg tccacataaa gacgtgattt
      361 atgaagtgca gggcacagca gcagggcttc tgtcttctcc agaagaacca aattactgag
      421 gtggagatta acatgctttc agttgggccc atttccagac caagggaaat tttttattta
      481 cattttttta cctttaattt cctcctcctc tccctcactc gaaaactgcc ttttggctgg
      541 gagggacaag cccggcagcg tgtgagggca ggagaggtgg ctcccacagg gcaccagggg
      601 ggccaaggca gcaccgtgat gcccatcgcc actgcaggtc cagctgttcc ccctgaaata
      661 ggcagcaatg tttgtggttt tgcttgattt attttaaaag ctgatatcca caacgcaggg
      721 tgggaggaat taacgtgcag aaattgtgtc gcctttctcg ctcgtcgctc ctttcccagg
      781 tctgtcccag agcgt
//
LOCUS       KCKM01003352             791 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52627apa ultra-conserved element locus
            uce-4515, sequence.
ACCESSION   KCKM01003352
VERSION     KCKM01003352.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 791)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 791)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..791
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52627apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>791
                     /note="ultra-conserved element locus uce-4515"
BASE COUNT          256 a          124 c          134 g          277 t
ORIGIN      
        1 gtggttttgg agtagaattt taaaattacc ttaaatgcct tcatacacag aggttactct
       61 ttatatttga aaaatatttg gagtctttta gcaattatat tacctggtag ctggaaaggc
      121 acttatatca gaaatcaatc tgaagcctag cgcacatcta attatctttc tctgtcttaa
      181 ttacttagca agtgctaata aactgcatgt atcatgacac tcatgtttaa taagcatata
      241 aatttaattg attttttttc ctctctttga agactaacag acacggaatt caatcacaag
      301 gcaatggcat tataacttcc aatataacat caggttttaa taagcctcct gtttgctgca
      361 cacatgtgct taagactgcc tggaaaccaa atcagtagag aaaagggatt actttagatt
      421 actttgaaat gtgcattgtt tgaaatggcc tctggtgacc agctttcatg aatggctgat
      481 tttacttgtg gggcacgtca tctggctcaa ttataccagg ctcttttgta taacaagtgc
      541 actttttagc tgtgttgaaa tatgaaattc taaaacaggg aaaatcagat ggtgagaaat
      601 aaatttaagt aactatatat tattggaaat ttttaactta gcagtaggca ctcttactga
      661 aaataagtgg gaattttctt ttaaagtttt cacagatttg aagttaatat aatgattttc
      721 tttaatgttt attttgacaa cattagcagc attaaaatca aagacacatt ttcactttct
      781 caggggcaga t
//
LOCUS       KCKM01003353             833 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52642apa ultra-conserved element locus
            uce-4324, sequence.
ACCESSION   KCKM01003353
VERSION     KCKM01003353.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 833)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 833)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..833
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52642apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>833
                     /note="ultra-conserved element locus uce-4324"
BASE COUNT          272 a          125 c          177 g          259 t
ORIGIN      
        1 tttctcttac caccactggc aaattttacc gaaacggtga tcattttgta atgatttaac
       61 tgtctgatgc ctgcagagga tctatggttt gccaccttac tggtgactat tatttaatag
      121 ttttgccaag taaactgtta gaaagcacaa aatacgtggg aataaaatag aaactgctac
      181 taattttaaa tgtgtacttc catcttaaaa aatgttctca tgaatttctg agcaaataaa
      241 aatattcaaa actacagtac tagagagtat atccttgtgg tgaatgttaa actgtcagca
      301 ggattttcag gtcatttgac aaaaaggata caggtgcagt agctagcagt gaaggtgact
      361 gctagtttca tcaatcactt tgcctttctt taagttgata cataatggac cccttcaatc
      421 agcttccttg ttctttgtca cttgtttagg aaaaagaaaa aggagggtgg aagggctgga
      481 ctttaaagtc aaggttataa aatgaattgt tacttattta cacaggataa ggaggataag
      541 tcagtgtgag aaggggctct tcataaaatg tcgagtttgt caatgggtga taatatgcgg
      601 tttgaagctt catgcagacc ttgaacggtg acagtagttg tcaaagcagt gattctgaac
      661 aaggatttaa aattaagaca ttgtctagtg acagagacac gacatgtgcc agaaaatgtg
      721 ctaatcggtg ttcacttaat tttcagaggg tcgtagtaaa tgatgatcct ctgacaaagt
      781 ttgtttaact gcaaaagcag aattgtaata gaagtagaat gtgaatttat aca
//
LOCUS       KCKM01003354             764 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52670apa ultra-conserved element locus
            uce-7530, sequence.
ACCESSION   KCKM01003354
VERSION     KCKM01003354.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 764)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 764)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..764
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52670apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>764
                     /note="ultra-conserved element locus uce-7530"
BASE COUNT          239 a          151 c          126 g          248 t
ORIGIN      
        1 attcattata tatttcacca tcagctgcat tttagctgac tctgtatatt catgaacgta
       61 tattacaact gtatgtatat atttgtgtta aaaacataag cctttcaaat caaaggtcaa
      121 agcatttttt gttttgaaga tgtgattgcc aattattttt gcactagtgc acataaacag
      181 gaaggacaaa ttcttaggta tgagttatat attcctgtac aaaataattg tatattctat
      241 gaagactgat tctttttcta gagaaatata caacaacaca agggaaatct tgtaccagca
      301 gcataactga agtggcaaga cacaatatta gaaaaacaga gctactttca ttactgtgat
      361 gctgtgtgtc agaatgtctc tccttaatga acctgtttgc aataagactc cgggtgcaaa
      421 gaggctattt agagagccta ttgtgtctat agtgagtcct tcaaatatct tcccaccatt
      481 agacatgccg cattgaccaa ttctgtcctg attgctgttc tttttagtat caagggacat
      541 tcttgcccag acagaccgat ggatcagaaa ctgcacttca taaaatgttt acactgtaca
      601 cacattcaca cagctataca agcaacagag tcccagatca caaagcacat tgaatgtgcc
      661 agtgtcatct caaggcttat gactttccaa tatctacaaa aagatttggg ttaaactttg
      721 cttcttctgc ctgcctgtca ttctaacagt ttttttcacc cgtt
//
LOCUS       KCKM01003355             841 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52684apa ultra-conserved element locus
            uce-389, sequence.
ACCESSION   KCKM01003355
VERSION     KCKM01003355.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 841)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 841)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..841
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52684apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>841
                     /note="ultra-conserved element locus uce-389"
BASE COUNT          239 a          157 c          182 g          263 t
ORIGIN      
        1 atggaactat ttccatttgg aggatttttt cccctaacac tagctcttca cagtttggga
       61 ttaaacacaa ttaaagcggg gagttgtttt acacgaatta catactgaac agcatttcta
      121 tagctgtttt ccaaaggcag ggttttctac agtctcgttt tacccatttt ggggggccca
      181 gattcagcat aaagaaccct ctctgaacca aaaatggaat gctcagaagt gattgtctcg
      241 aagcctggaa atagaagaca ggattttttt tctctcaacc tgtgttttca gtcaattaaa
      301 atttgtactc gaggcttttc ggtttgaagc cacccctgtg tctgtgatga gcaatccttc
      361 ttgtttgtgc agtcattcat tatctccatt accaagagga gaatagagga caattacatt
      421 gtttggacga atcagagtgt taggaggagt atttatcatg gtggcagagt gcagcacctg
      481 acagcgcacg attgatggcc aggaatgagt gtgagtggcc aaagcagcct catatgatgc
      541 aaattactga ctgtggattc caatttatcc tgttcatttt tcttgccttt gctgaagact
      601 attagtggtt tttgaagcag tgaaggggtc attactaatg tgggctagaa gcaggagggg
      661 gaaggagggg aaaagccttc tgtaattaca cagccttcaa gaaaaggctg tgggcccagc
      721 caaaaaagtg tcaacactta gcaatcagaa aaatttattt tcattttatc cttaactcat
      781 attaactcaa cattatcatc tttctttgtt aatatttgca gaatattaaa agcttgactt
      841 c
//
LOCUS       KCKM01003356             493 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52700apa ultra-conserved element locus
            uce-4889, sequence.
ACCESSION   KCKM01003356
VERSION     KCKM01003356.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 493)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 493)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52700apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>493
                     /note="ultra-conserved element locus uce-4889"
BASE COUNT          154 a           84 c          111 g          144 t
ORIGIN      
        1 aatgacagga ggatcattgt gagacaatcg atgtgcagaa ttgtagccaa aaatctgaat
       61 tcaccagaaa ccaataagct gaaatagcca caaccaactg tccatagcct tgtctagaat
      121 ggctttaaac aaaaaatata aagagccatg gacagtctcc ttacccctgt ccagaatttg
      181 atgtaaacaa catccataga aactgggatc gttaagaaag tttatccata tatctggata
      241 gcaataaaaa gcgtttccta ggaaactgta aaatcctgta ccaagcagtg tacagccaag
      301 ctgagaggaa cattaggttg gatttatatt ttcaaggtac aactttgcat gatttctttt
      361 agatcctgtg ataatgtaca aggagagcac gtgtgaaggt cagggctggg gttgtttgtt
      421 tgtttgtttg tttgttttca gagttttgag ttcagtttta acgaggagtt gcctctatgg
      481 tggacggggt tcc
//
LOCUS       KCKM01003357            1178 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52716apa ultra-conserved element locus
            uce-2485, sequence.
ACCESSION   KCKM01003357
VERSION     KCKM01003357.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1178)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1178)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1178
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52716apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1178
                     /note="ultra-conserved element locus uce-2485"
BASE COUNT          393 a          227 c          224 g          334 t
ORIGIN      
        1 gtcagtgata aggtggtatg tcactgacct tagctactga gctgatgaaa acaacgacag
       61 cacaaaggca tacagctcaa tcactagtga tcaatttctc tgtgactcat tgagagattt
      121 aaaaaaaaca gcagaaacaa tcttgttcct atgaaatctg gtggatcctg aagtgtttag
      181 acagcatctt aagctcacaa actaatgaaa gagatgagaa aatgataaga cggtatcttt
      241 ttttgacctt ttgacatata gacctgctta atccccagtc tcattgtccc ttggggtttc
      301 taaagactga cccaattcct caggcaaaac catattgtgg tgtcagctga aagacgagtg
      361 tcttttttta aacgtacagt atgatgtgtc ctaaactttt tcctctgtac ttgcagaaag
      421 ccgaagtcat cacaaatagc ttttcaaaat aaaggctcag agaagagaga ggaagtgata
      481 tgggactgtg catatgcaag acactctgta tatttcaaag ttttagcaag tctagcacaa
      541 gatgtccaaa tgttttctct ggctatatct tcagaggcta aactgtgatt aatagcattg
      601 aaagaaccct ttgaagcagg attggtgaca tcaaagccct aatccatggg tggcaggatt
      661 tttataatga gtgggaagca ttttaacaca tttcaaagga tttacagcat gaataaacaa
      721 taggcctctg cagatgtacc acacaccttt cagaaccaga acacataaat aagtgtccat
      781 tttaatttaa atgtaaataa agtgttaaca cttctttcag atgctaaagt gccttgtttg
      841 catcaactcc agtttttagc tgtttgcttt acagcaagcc agtaactctg aacagtcttc
      901 agagttttgc taaactatat attacataac gggtaaggag gcaggatgga aaaaacaaaa
      961 atcaagaaca cttaatctct ggtaattatt ccataaagga gcagagcaaa cccagtgccc
     1021 acataacact gaaaggaaca ttcgctctta ctttcctcaa aacaaggaaa ttatcgatcc
     1081 cctggaaaca atctgggggc tggcaaataa acatagcaat gacattcttt ggagtgatcc
     1141 aaactttaaa ctatttctct tttaagctgc tggcactg
//
LOCUS       KCKM01003358             393 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52731apa ultra-conserved element locus
            uce-4699, sequence.
ACCESSION   KCKM01003358
VERSION     KCKM01003358.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 393)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 393)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52731apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>393
                     /note="ultra-conserved element locus uce-4699"
BASE COUNT          106 a           98 c           75 g          114 t
ORIGIN      
        1 caccccactg cactgcaata cagttccagg ctgtaaaaca gaactctaca ttactatcaa
       61 cctttaagca ctacaattta tttttttttt aacaaaagca attggtttcc aacaggctgg
      121 ataataagtc ttttgacctg cattcttctc tgacccatta aggtcacccc tgtgctcggg
      181 catatagctg acttaggaaa tgcctgcaag tcctgcattt catctcctgc ccactcaaaa
      241 taaagctttc tttaaatgtg tctgtacggg tccctgaaga ccagggaggc atccctgtag
      301 tgggcaatgg agggacagaa gcttctgcct ttattaatga atgcagacca ttatgagtct
      361 ggctggctcc tgcactgttc ccagaagcat ata
//
LOCUS       KCKM01003359             911 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52745apa ultra-conserved element locus
            uce-2437, sequence.
ACCESSION   KCKM01003359
VERSION     KCKM01003359.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 911)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 911)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..911
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52745apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>911
                     /note="ultra-conserved element locus uce-2437"
BASE COUNT          237 a          256 c          214 g          204 t
ORIGIN      
        1 aaatgtctct cactgctaca ctctttaaaa ctcaagtgtc tattgtctgc ctcaggcaat
       61 ttactgctca gtccatttat aagcaataaa acactagaga cccctccagt acaatacaag
      121 agatctcatc taacatgggg atagaaagta gagaggtaaa gttttacgaa aggtggctgt
      181 acatcgctct tgaagccaat cgccgatcct gcacaccagg tggccttcct tgtcatcttc
      241 cacgctcctg ctgcgcttac tgctctgttg gcttctctgt acgcaccgcc ccccgagaac
      301 ggcatacgac ccggcgcgca cagcgggcag ttccgagccg caggattgtg ttgttgtcat
      361 tcaaaggtgg aggtggttgg attttccaga tcccagcatt tcataaggca cacagcatat
      421 ataacgatag ggatattgca agggacacgt caagacacaa actaacttca aaacagaaaa
      481 gtaatcaaca gctacaggta tgtaaagaaa actctctcat tagctatggc ctctggtgca
      541 ggaaaatgcc cccctcttct ctcgagggaa gcagcagctg ggaagttgca gagttaaggt
      601 ggctcggccc ggcaccaccg ctccccacag aggagcagct tcctccctgg caccggaggg
      661 ctgccagagg cacagaagga gggctttgcc acaagaacct cattttctct gctggcaaac
      721 gtgacgaagg gaacatgagc tgtcagtttg gacaagctgt ccagtagaag ccagagtagc
      781 agttctccct cagcgtgagc ctgctctttc gtacctcggt taacagatcg ccagcaaccc
      841 agagctgtgt cctgccccgg ctacgagtcc ccttcccttc ttgacagaac caactaccgc
      901 actcagccta a
//
LOCUS       KCKM01003360             940 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52761apa ultra-conserved element locus
            uce-463, sequence.
ACCESSION   KCKM01003360
VERSION     KCKM01003360.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 940)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 940)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..940
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52761apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>940
                     /note="ultra-conserved element locus uce-463"
BASE COUNT          239 a          226 c          218 g          257 t
ORIGIN      
        1 aaaacaactc gcgtgatcgc tccgtttctt gttagagacg gagtcgaggg ctctggatac
       61 cacatcacgt gcttgttggt gcttcctatc acgctgtcaa ttgtgaaaac ctgccgtcgc
      121 ccaccagccg tcgacacttt ggggcacgac acagattttg gcagcacaaa cctcgtcctg
      181 tcctgcggga atcgccatcg cgttcccacg ggcacgcctg cggccggcgc ggtggctttc
      241 caggccggtg gcagcacagc ctgctttatc aggatgaatg aagatgaaaa ggaagacaaa
      301 tagaagtgaa tgaggcactg ctttacgtga ttcatgatag cttgcagtaa gcctgttagc
      361 ctccgcctgg ctcccttctc agagaataat ggatagttac agtgtgtata gtgacattgt
      421 caaaccatca ggaattgctg attatagtgc taaatattga tctctgcttc acatgtgtca
      481 aaattctttc ttcccttaat tagaacttcc ctaagcacca tacaagaaca aaccgaatat
      541 atcagatctc tgtgaaaggg agtgtgatac tggaatataa ttgtgacctc ttgtctgctg
      601 cttctctctg gagttttgag atgacttcag ctgtctatcc tgcccttccc agcacatgtg
      661 ataatcatac tcatttttcc caatctaacc aatggaagat ttttaaggct gtgcttttca
      721 tcatttcaac ccaccggggc tgcagtcaga tggcagggaa acttaaagtg ccagaaggtg
      781 cctttttcta tttgtttgtt tcatggtaca ctgcaccagg caatgacctg cggcgggagt
      841 gtcgtgcaaa acggagacag gttcacccaa tcaaagggag ctctaaaatt aacacagatc
      901 ccttcatttc ttcatgcggg attggggaag gacaatttaa
//
LOCUS       KCKM01003361            1033 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52777apa ultra-conserved element locus
            uce-4659, sequence.
ACCESSION   KCKM01003361
VERSION     KCKM01003361.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1033)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1033)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1033
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52777apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1033
                     /note="ultra-conserved element locus uce-4659"
BASE COUNT          371 a          197 c          180 g          285 t
ORIGIN      
        1 agctgggaga attaattctg ttcaaccagg aaaatatatt cagtagaatg tttattgggc
       61 cagtgaggtg tttcccaaaa cgtcttggca gaccaatccc gtcctatatg caaacttggg
      121 taaagaaatt tatccactta cacgtggtgc atgtggttaa acagtgaaga gagctgcaac
      181 ctttcccctt ttccctccct aaaaaattct aacagttcat tggtaagaac tggactctgt
      241 agaatggaat ccttaacttc caccactgca agatggaaag agttaaaaaa aggttggaaa
      301 tagctctttc gaaacacaga aactaaaggg ttacctgcta cagttttact aaaaattgta
      361 caaaattgcc actttttttt tcaattagaa acagttccta tgaccagaat tcctataaga
      421 caatagaaaa tacatcaaca gaatgataga taaatccatc cttggaagca attgttatgt
      481 gttaacttac agatgctgtg ctaggacatg gaccgccaac actggattaa ccttgcctat
      541 aagctatgtt tctgggagga agagcaagta cacggttcac aaatatacca aataacaacc
      601 aaatatacca aatttcaacc tgatggatgt cagaatatca ctttttttgg aacaaatatt
      661 gagcagaata aacacgctta tcccctttgg ctccacgttt accatcactg aaatgaaatt
      721 aaaaaccgga acaatgaaac agcattttct ctggtttgtt tcgttttttt ttttcttttc
      781 tttaaaacaa agcatttaag acaactttaa aaagcaatct tacctgataa ctcttcttct
      841 gccataggca cagggaccag agaaccgaca aaggattaca gaaataaagc taattcacta
      901 gtgattaatg tatccagtga aactacactg cattgatagc acaatacagg caaaccaatg
      961 tcggatacat tgaaatcaca aaaggaaaaa gggactaaaa atggtaggaa ttggcagaaa
     1021 actgatatga aaa
//
LOCUS       KCKM01003362             680 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52793apa ultra-conserved element locus
            uce-6907, sequence.
ACCESSION   KCKM01003362
VERSION     KCKM01003362.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 680)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 680)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..680
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52793apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>680
                     /note="ultra-conserved element locus uce-6907"
BASE COUNT          199 a          126 c          138 g          217 t
ORIGIN      
        1 ggaatatttc aacgtgcttt acgtgattcg tttacgtctt aacggtaagg agttttggat
       61 gccagtgtta cacctcgtaa cagattcgat ttgcactgag acagtagtcg cagctaccgt
      121 atgggtagca gcgtttcctc acaagagata tgttgctatt ttgtatggtt tttgatatgc
      181 agcctaaatg aagtctctga aggaggatct gtcttttgct aactgccatc gtttttgtat
      241 aaagtcgaag gtattcatat tatgtcttca tcttctatat ctcaactagt aacaatatca
      301 caactactcc ctcctgacaa ctatattcat ttctcattaa agatatttca tgttttattc
      361 aggaatttaa atgaagctat cagagcctgt aatagcaaca gtttgggata attgtatctc
      421 attgatggca gcctcaagag ttctaattaa tatatattta gctccctggc tgtctttaga
      481 ccaaacgcct cagtatgaaa gacagggaaa ggcgataagg gaagggggaa gggaacagac
      541 tccaaaataa cagcccctta tggaaatttg ggttggaaaa tctgtgttgc aagaaagaac
      601 tgcgtgcctt gggatccttt ctttttttcc attcgatcca aaataacttt tgagatacag
      661 agaccttcct caagaaaaga
//
LOCUS       KCKM01003363             785 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52808apa ultra-conserved element locus
            uce-2864, sequence.
ACCESSION   KCKM01003363
VERSION     KCKM01003363.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 785)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 785)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..785
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52808apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>785
                     /note="ultra-conserved element locus uce-2864"
BASE COUNT          257 a          126 c          177 g          225 t
ORIGIN      
        1 tgtatttgtt aaaggttctc tgccaaagtt gctgtgtgaa gagtacagca ggtcgtgaaa
       61 tatgaaaata caaatagctt ggagccaaca aaccatttag ttgaaaatta atgaaaaata
      121 aatattctcc tgcagagcaa gcaggatatg ttctggacct gcctttcctg tgacctacag
      181 gattttaaga gaagagcttc agaattttat tggcattgcc actattagac gaacttttct
      241 ttcccttctc cccagactag ggtcagcttt aaagagagca ttaagtgaat ggctaatgga
      301 attaagggta taataataga aggatatagt gagacaattg tattaacaag aaataaatca
      361 tgttgagtgt aaggtaagtg ttttttaatt gattgatggg aaggatgctc cataggtttt
      421 ttcgaggact aacagccact tgccttccca tctagagtaa aaagccaaaa gggaaaaaaa
      481 gataagaaaa ttatgcagtg gggagataaa ttattcagag gagatggcca ttttgtgctg
      541 acatcactaa tgcaaaaaag cattaaatct ttgacactag ctgcattcct tagaagttgt
      601 ggtggctgga acaaggcatt agagattaca gctagaaggc tgagcttccc tgggtgcctt
      661 aagaggcttt ccaaggtgat ctagtaagta aagactcagc aagggctctt accagacggc
      721 tctaaattta cattagtcta gtgacactat ctgtagtgac aacagctctg atgttctgtg
      781 tagta
//
LOCUS       KCKM01003364             777 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52824apa ultra-conserved element locus
            uce-4261, sequence.
ACCESSION   KCKM01003364
VERSION     KCKM01003364.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 777)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 777)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..777
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52824apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>777
                     /note="ultra-conserved element locus uce-4261"
BASE COUNT          270 a          160 c          138 g          209 t
ORIGIN      
        1 attcagacca taccaaaacc attctagtac aatactattc ttcaattatc caccaggtgt
       61 tttgaaagag tagtaatcta attgacatta gaaggtaagc cactgcagtg taatttctac
      121 aggagatcac catatcatag gaaaagttat catcgtacac cagtgtgctc tgggctctca
      181 cagaatagga acaaaaccta cagcctataa tgaagcgtac aagagagtta atgttccaaa
      241 tgggagatta aagagtttgg tatggcctca gcactattaa catgtaaaaa agcagcctac
      301 agaatttaag aaaaatccca cagaccccag tccaaggctc tgctgcccac gaaccacttc
      361 taagcagaga agccacatca cacagtctga ctgccatgtt agtttggagt tgccgtctgc
      421 aatatggaca caaaaagtac catatgttag attagcaaga taatgaaaca agtaagtttg
      481 tacaaattta cagtaattgc atttatattc ccagcacatc catgcagtgt ggctgaattg
      541 gatttgaggc aattccaatc taatcttccc aaattccatt ctaaattctt acgtgaagtg
      601 agatgcttat tcttaagatt taaaagataa agcagtctag ttacccttgc aactaccttt
      661 gacactacct ccagaaccac accatgccta aaaggaactg taccatataa tttttttaat
      721 cttcaagaat gaaggaagag gaaagcacgg aaatgcggtg agtcaatttt ctattag
//
LOCUS       KCKM01003365            1018 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52839apa ultra-conserved element locus
            uce-1823, sequence.
ACCESSION   KCKM01003365
VERSION     KCKM01003365.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1018)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1018)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1018
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52839apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1018
                     /note="ultra-conserved element locus uce-1823"
BASE COUNT          314 a          202 c          196 g          306 t
ORIGIN      
        1 ttggtcattc tccaaatgtt actcaatatc tgcagtacgc aaagtattaa attctccttg
       61 tgatctgctt caagagataa gaaaagctgg aagcagataa aagcaaaaaa ctccctaaaa
      121 tggaacctgt tttcagcact ggtaaaatct ctagtgattt ttttctttat agcctaagga
      181 gaaaagttgt attagtctac tgtgtgaagc taatcctttg ctgttcaaaa taaagaagga
      241 ccgaaatctg aaatttacat ttatacatcc cactgaacaa atgtaaaaat ggaaaggctg
      301 aaattaattc ttggcaatta ttacttagtt gctgagatgc actttagaat tgctaaaaga
      361 caagaaccag aactgctcta tttttgaata aggttctttg caatgatggt ctctcccggc
      421 tttttgcaag gtacagtagc tgcagctttg tttatctggc ccctacacaa tattgtcagg
      481 atgcatttcc attttccaag tgactgctgc cactgtgcca caatctgtgc tcatttctcg
      541 agcagctaaa ccctttgaca ctgtggtttt taattaaaat tacattaaac ttaatcagcc
      601 agaaagaggc tgctgtagaa ggcaggtttg attgcaacct gcaaagggcg ctggggctgc
      661 caactcgcta aagatgtgcc ggcagatgcc aagctgcttg tgtgagcccc atggtcacaa
      721 aaatgctatg agaggtcagt tctgtcttca cttttttcta gcactgtcac caaactataa
      781 tgcgtgacaa ctcttgataa agctcaagga agagaaagaa atacattgct aatacagcct
      841 atgcactttt attcatttct caagaattgc gactcacaga aaagacatag ttgataaatg
      901 ctgtattttg gcaaatcctc caaatgacgg gcctctaggt ctacctgcac atttaagaac
      961 caaaatatgt gcaaggattt atgagattgg gccttgtgat ataaatattc cctcgtct
//
LOCUS       KCKM01003366             358 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52855apa ultra-conserved element locus
            uce-4356, sequence.
ACCESSION   KCKM01003366
VERSION     KCKM01003366.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 358)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 358)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52855apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>358
                     /note="ultra-conserved element locus uce-4356"
BASE COUNT          114 a           77 c           85 g           82 t
ORIGIN      
        1 aagtgcagaa actattatcc cacaactggg gtatagcacc cagaatataa agcttacctt
       61 gaagaaagtc atggttgctc catcttcaac tgccccatac tctatctttg tctgtttggc
      121 caaatcatca gcagaatcaa taggggattc catacgttcc actgtcagaa aggcggctag
      181 gttagcagtg tacgaggaaa tgatgataag tgtgaaaaac caccaaatgc ctcccactat
      241 cctggtggag agggctttgg gcatgagctc agaacctaac gaaaaccagg ggagaaaggt
      301 gaaaccagtg cacagaaaac aataagtgtt cagcactttt tgctacagtg gggagatg
//
LOCUS       KCKM01003367             957 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52870apa ultra-conserved element locus
            uce-7298, sequence.
ACCESSION   KCKM01003367
VERSION     KCKM01003367.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 957)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 957)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..957
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52870apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>957
                     /note="ultra-conserved element locus uce-7298"
BASE COUNT          297 a          174 c          179 g          307 t
ORIGIN      
        1 aattaattag tttcagttaa attactttca catatggata attttctttt taccaccact
       61 cagtacccta ttttattaaa ttaaatcaag cacataatca atcacgtctc tgccaaaaaa
      121 gaaaaaggaa agtcattgat atgtttttct atcatttata aattacctgg gaaagcaact
      181 aaggaggtgt ttagtttggt cctgaggtat ggccagtcgg tgcatgtaag gcaaaagcaa
      241 tactgcatct ttaaacaggc ttgaataagg tttctttaac tattgagcct aactctgaga
      301 tctcccctgc tgtgagccgt gagttgcttg tacgcttgtt ctagagagta ataagtattg
      361 ttgtttagca attgtgttgt tgaaattcag ctccactatg tctgacagta tttatctaaa
      421 atactttccc tggtgcgtgc tcaagttcca gtaaaccgtg tcttattgtg cgaccttttc
      481 attttccagt gaaaagggat cagctcgtca gataaaagct acaagctgga gtacaggaaa
      541 aatgcgtgct cagaaaatcc gagcatgatt gaaaacaaga tgtgttaaat caatgcagtt
      601 tatcgcctgc ctattcctgg caattgctgt tctaagctca ttctgagcac acagtagatg
      661 ataaaagtat agtgtcacag tgctcactgg ggtgtgaggg cagggaaaca tgtttatcag
      721 acaggcttgt atgatttttt tctttaccct tgataacagt tattgtcaaa atttttgcca
      781 gaaatcctga acaattatgg aagctggtga cacaacttct gctaaaatca gagactactg
      841 agagctctca attgtaaatt tctatttaaa tattacaaac tgacaaacaa caaacccaac
      901 tgttttaatt ttaaacaatc tgctgcatca tcaaggatgt agccaaaatg gtacttt
//
LOCUS       KCKM01003368             846 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52886apa ultra-conserved element locus
            uce-494, sequence.
ACCESSION   KCKM01003368
VERSION     KCKM01003368.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 846)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 846)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..846
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52886apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>846
                     /note="ultra-conserved element locus uce-494"
BASE COUNT          271 a          164 c          147 g          264 t
ORIGIN      
        1 taacacacaa ctcattaaaa atatgtgctt aatacaggga tttactgtaa tgatctatag
       61 caataatcaa cacatcgcta gtaaactgtg atacagatac aaacagatat acccgtacac
      121 acatatgtat agacattgta gaagcctttt taaaaaattc cagactcaat ttttaaagat
      181 acaagagtat agctcatggc aaaaagacac aaaattgaac tttccaagat cagtacttaa
      241 cataaaaatt tcatcacaat ctttatcatc ttgcagtggt tgcagaaaag gcctaagctc
      301 tctccacctt taacttccta aagtcgccta ttttaccttc aaatctgatg aagtgtcaaa
      361 gtcatttacc agtaatgagt tctgctgcaa attttatttt gcttggaatt taattaatgg
      421 gccaaagact ttccattgtg atttgagcaa atgaataata aatcaagaaa ggagatttgt
      481 cagggaagga acatctgttt cttacaagcg ttacaacatg actacagctc ggctgtgcat
      541 taccagcaca aagacggtag gagtcctctc ctctgaagct ctcttcattt attgctccac
      601 tgaaggtgaa cagagagcac tctaatgggc ctctggtgtt aataaaagct tttcgcttcc
      661 ccagttttgc tgtagccccc ttccttttgg gtgctcctgt ccttagtaca tggtttgttg
      721 gtcaacgtca ggattctgca gtgtcagtgc tttattggat gattaataag ggaaagacaa
      781 attcataagc agaaacaata tgaaattgcc atcatattag tgttaactgt catgcttttt
      841 attttg
//
LOCUS       KCKM01003369             669 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52901apa ultra-conserved element locus
            uce-5026, sequence.
ACCESSION   KCKM01003369
VERSION     KCKM01003369.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 669)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 669)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..669
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52901apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>669
                     /note="ultra-conserved element locus uce-5026"
BASE COUNT          203 a          127 c          142 g          197 t
ORIGIN      
        1 tattgcaaac atgctgtcca aagaaatcat tacttttgct ggacagttac tcttatttct
       61 agtcactgct ttatgtaaag cccaagacat agaattatgg gacttgcatt taccaaacac
      121 aacatcgttg gttaataaat cagatgaagt aagcaaggag acctttaaaa tagtctttct
      181 tcctttccta caacccagct ggacagactt gaagaaaaac agaaggagac atatcgacgc
      241 atgttggaac agctcctgtt ggcagaaaag tgccatcgcc gcacagttta tgagctagaa
      301 aatgagaaac ataaacatac agattacatg aacaagagcg atgactttac caacctcttg
      361 gaacaggagc gggagaggtg agtacctgag acagtgcaac cctgtgtccc agtggttcag
      421 cagtggcatt gtcttgtatt ttctgtgttt aaatgacact aaactcacgt gtaaactgct
      481 tgtaaacgtt ggtctgctca tgtttttagt aagtatgtta ctggagaaat ctagagctgg
      541 aggaacagca ttgaatgttc ccgtactgtg ctcttgaatt aagaaaggaa tttgttttga
      601 attactcatg cccattttag gttcacctcc cggtagcttt tgatcagatg ttatttatgt
      661 tggctaagt
//
LOCUS       KCKM01003370             893 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52916apa ultra-conserved element locus
            uce-7058, sequence.
ACCESSION   KCKM01003370
VERSION     KCKM01003370.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 893)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 893)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..893
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52916apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>893
                     /note="ultra-conserved element locus uce-7058"
BASE COUNT          293 a          179 c          164 g          257 t
ORIGIN      
        1 taatcttatt ccttcttctt acatctctct ccgaaaggct cactcaaacc ctggaaagga
       61 ctgcaggact ttgctcaaaa acatcgagac catggccagc agaattcttc cttctagaag
      121 atgggctgct tttgttagct ggagaatcag caataatctt accactgttc tgtctgcaga
      181 cagaaatatt cagacacatg tcctgacact ggcagttgca ggctgttacc aatgcttaaa
      241 caagaccaca atttgttcca gaacgataaa atgaccctct gaagtgaatt acactgtgaa
      301 aaataaatgt aaaatactgt gtagatgcac aaatgattat ttcattatct ggccaatgta
      361 tgaacgacag atacaaattg ttccaatcat agagtgatga aagagcaatg aacaatgggt
      421 tcttgaatga gcacaggaag aaaataatga attgcagttt aaatgaaatc aggattcaat
      481 ggactggatc acagactgtc cttcagacat aggaattctg cattagttaa acactgtcat
      541 ttggagaaac gtcctttaag aagaaggaat ctaaatggat cagagaagga aacaaaatag
      601 gataagtctg gctactggct tgcttttagc aagctggact ggaacattcc cactcctgct
      661 gctttgtgaa ttcatgcact gatctactcc aaattagcag cttgcaatcc acaaagttaa
      721 cagaccgttt gtacttttgc tttttccctg tgttaacctt gctcttcctc tactacttaa
      781 ttactttaag gcaacatctg atgagatctc ttacacatat tttggattca taagaaaaac
      841 caagacatca aaagtttctg ttatttcgta gaaataacat gtggcaaaag ctc
//
LOCUS       KCKM01003371             626 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52932apa ultra-conserved element locus
            uce-1972, sequence.
ACCESSION   KCKM01003371
VERSION     KCKM01003371.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 626)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 626)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..626
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52932apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>626
                     /note="ultra-conserved element locus uce-1972"
BASE COUNT          198 a          131 c          124 g          173 t
ORIGIN      
        1 cccccccaga ctcgctcaca gttattggcc atggcactgc ccaggatgcc caggcccctt
       61 ttcagcctct cgcctcgcag attgtgcggg aggcagcctg ccttttaatc caagtcagaa
      121 acggaccagg atacaacctc aatgcaacta actgtttcta aaaaaaagac catctggtaa
      181 ttgtcttcct ttagatcttc ccttaattat gcttttaatt aaagatggtt caaggcattg
      241 gaccacatga agggcagtaa ttacaaatta cattacaaac ccaacagatg tagctctatc
      301 tgctgggaaa aaggtactgg aataaaattt gactaaactt taggataaat taatccgctg
      361 ccttgagaac agaagcacat tttttattat gcagactcta gccaggattt aagttctctg
      421 tcatgattgt tttcatattt ctttgacatc tattgatttg gaggcagctg caaggctttg
      481 tcacaagaga gaagagcagt cacaatatat tagcttgatg gcataactcg aatatgagta
      541 ggaaggatag aaacatgaca gggagccacg tgaccaagtg atgggtctcc aacaaaataa
      601 agaaattaat ttttaataaa aagctt
//
LOCUS       KCKM01003372            1113 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52948apa ultra-conserved element locus
            uce-810, sequence.
ACCESSION   KCKM01003372
VERSION     KCKM01003372.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1113)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1113)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1113
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52948apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1113
                     /note="ultra-conserved element locus uce-810"
BASE COUNT          364 a          203 c          207 g          339 t
ORIGIN      
        1 agggaaagga ctcaaaaata cctgcaaaga atctgtatca cagtgaaact ttcaggctgc
       61 acgctgtaga agaccaagtc attgctttaa ccctactgct aattgtataa cattagcaac
      121 attcctcagc catgtgatta gtgttaaaaa tgcaattctt gaactacaac tggcctacaa
      181 gtgataatta aagctatttg tgacatttga ggcttataat gattaacttg tctgcagtga
      241 gataaacaaa taacccgcac ctgtagagac tttatttcct gaaggtaaaa caactgttta
      301 ggagagatca tgctggcaaa acagctgctt gcattctgga gaggaaacaa ggtagtatct
      361 ttcaacaaac gccaactctg gtgttttatc agctctatct cattaactgg aaacaaggct
      421 taaatgcttt gtttataaat tatgattatt tctgattgca gcagttactg atagtgcact
      481 catttgcaat gcaactcttt gaatttgttt aattacaatt tgaaacaagg cagagaagat
      541 taattaaccc acctggctgg ctggcacata gtcctggctc ggctctgtca tactcatata
      601 catgttctca ccgtcaaact gcaaaggaaa taatagtaaa cattcagcaa agttgaatat
      661 ttttcagcat tgactgaaaa aaacagtagt cataaaataa tattacagcc tagttttaga
      721 gacttgtaat tgcgtgtgtg catcttgtct ttgatgttcc tgttgtcatc cttattgacc
      781 ctggatgtca gtgatttgga gtaattagcg ctctagtaat tacagctagc aagcaagaaa
      841 tgaatggttt cctttcatct gcaatctgtt ttaaaacaaa atggctcatt ttgtgctccg
      901 tgtgtacata ttgctgttgg ttgtaatgaa gtactaagcg aattgcacag ttactgagaa
      961 aaggaagatg agaatagaaa ctgcactaaa atgcatctta atggattcca actttagctt
     1021 ctgagcagaa caagagttga aatttccaaa caaattaaac cccctcctat tgaaatgttc
     1081 ccatatcaga aagtaggaaa tagatttcca gac
//
LOCUS       KCKM01003373             436 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52963apa ultra-conserved element locus
            uce-609, sequence.
ACCESSION   KCKM01003373
VERSION     KCKM01003373.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 436)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 436)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52963apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>436
                     /note="ultra-conserved element locus uce-609"
BASE COUNT          169 a           89 c           63 g          115 t
ORIGIN      
        1 aaaaaaagga aaaaaaaaga aatcatttga ttttcattgc cctggagaga attaaatacc
       61 cccaaggaaa aattctggta cattctctgc acacatttac atgcagccag tgaagtaaac
      121 atttccataa ttgctcactt cagaacacgt tacccagttc ctaggtacaa taactgtcag
      181 gagtcaatga ggaataaaga attttcctga atccttgcac ataacctgac tagcattaat
      241 aactccacag ttgtacataa gttaagaaat ggattactgc caggcaacaa ccctgctctg
      301 aacactttga gcataatgtg ttcttcagac taccattaac aaaacaaata attattaaaa
      361 aaaaccacta aaaagtcaag gctattgata acaaggtaca cttctctgtc cgttaaaaat
      421 catatagtct gaacta
//
LOCUS       KCKM01003374             659 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52979apa ultra-conserved element locus
            uce-6643, sequence.
ACCESSION   KCKM01003374
VERSION     KCKM01003374.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 659)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 659)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..659
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52979apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>659
                     /note="ultra-conserved element locus uce-6643"
BASE COUNT          236 a          133 c          110 g          180 t
ORIGIN      
        1 ttcagagaca ccactgaaag catattcaac cagtcttaac agaaaatcag acatgccttt
       61 cacctaatca aaaccaaaga ggttcaatca ggcgtatgaa cgtgtagcca ccaaactgac
      121 aacttcccat agtccatctg atttttgtta aacaatataa aagaaagctc tgcagtgacc
      181 ctctagctga ttgaatgtaa aactgaggag tatgaaacgg ggtttgtgaa gcagaacttt
      241 atgtcaggtt aaagctagac acatctcttc cacacagtct aagctcgtca attgtgcacc
      301 ttaaaatttt atgggaaagg atactgtttg atgcagtcca ccagtggtcc ataacaacag
      361 tcattcacag tacactgcag acaaataaga gtagaagtat agagatgggc aactacagaa
      421 ccattatagt taaacagtat cttaaaaaca gtaattactt ttcttcaaaa aggctatcag
      481 atgttgttca gatttaatca cagaaaacaa aaactgcatg cttttattca ctataaaagc
      541 aacctattaa aaagtgaaat gctcccctca caaatattgc attgccattt atggtgcacc
      601 ctgacctcac tgatagttta cgatgacagt aattaaatga ggtttaaaat cttttactc
//
LOCUS       KCKM01003375             890 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 52994apa ultra-conserved element locus
            uce-699, sequence.
ACCESSION   KCKM01003375
VERSION     KCKM01003375.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 890)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 890)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..890
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52994apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>890
                     /note="ultra-conserved element locus uce-699"
BASE COUNT          301 a          186 c          153 g          250 t
ORIGIN      
        1 aaaaaactaa tagccatgat taatgacaat gggctagagg agagttggga cacagccgcc
       61 acatatatca tcctttccca tcagtctctg ctcctccctg cccctcttcc tcctaccagc
      121 aaggcattat aaaaatgtct tatctgcttt cgactttttc tgaaatcaca gtactgctca
      181 aaaagaaggg ggaaagagag agagagagac aaagaggcaa tagggcgaac aagaaaatgg
      241 catgtaaaat aactataaga tattccaggg gaaaatgcac gagctgtaat cattcaagat
      301 ttcagcaact tgactcttca catgctgaag ccacattttc aaggtcttat ctgccatatg
      361 gttccctgtt tggatgattt attaggtgta gaaagcacac tgataaattt tactgcattt
      421 ccctgaatag gcaacctatg gtgtcaataa caaagctcag gccgctttaa tgaaaactgt
      481 aagcaccaaa gggtaaccat ttatttatga gtcactacag tattactagg acaaaattta
      541 tcttcccttc tcacgcactc tgcagaaacc aaatctggtc aaagaaacag cgatcacatc
      601 catatgtcag tgacttacta acatgtctcc tgcacactca gggcttgtat ccaaataaac
      661 agtttccatt taatgactgt tttctctaac gtacaagagg ctcttgagtt ttaaaacttt
      721 ttaaaaaata cattggtgac aactttcata tctacaaacc attacactgt tgattttcta
      781 tgtccaagac aaaaaataaa acctatcaaa accaagaata atcatttcag tggtttaagc
      841 tttagctgta tagaagtgga tcatcaaaaa cactttggat aatcttggag
//
LOCUS       KCKM01003376             329 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53009apa ultra-conserved element locus
            uce-6796, sequence.
ACCESSION   KCKM01003376
VERSION     KCKM01003376.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 329)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 329)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53009apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>329
                     /note="ultra-conserved element locus uce-6796"
BASE COUNT          126 a           57 c           59 g           87 t
ORIGIN      
        1 tctatcaaaa acaaagaaag tcttattctg taggtacaac cagcctggtg aacataacaa
       61 gcagagacta actgcataat atagaactca aacaggaata tgttttttat gatgtgccag
      121 cataagggag atcaaagact aaagccaaat aaatagcaac tgagtacgag caaaggaagc
      181 atattaggct ttaaagtaat cagaaacaaa cctagtgtat gccaacaccc tctggattca
      241 aaagtaacat tttcctcctt ttcataaaag gttcaagaac tgacagattt tgctttggct
      301 ttaaataact gtttttataa ctgggagag
//
LOCUS       KCKM01003377            1121 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53024apa ultra-conserved element locus
            uce-1090, sequence.
ACCESSION   KCKM01003377
VERSION     KCKM01003377.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1121)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1121)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1121
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53024apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1121
                     /note="ultra-conserved element locus uce-1090"
BASE COUNT          349 a          215 c          200 g          357 t
ORIGIN      
        1 tgtttgagtt actgccagct acggagtaga gaattcatca tctgtcagtg acctccaaga
       61 tcagtcaaaa ttttcactgc tcagaaagga aaatcatata aaaagtgaaa catctgttag
      121 gagaataagc tgcattttat ggtgcttgct gtatgcagca acatgcctgt aatctcagac
      181 catgtttgct ataacatagt gactcactgc ttctcttcac tacgcagttc tgatgcctga
      241 agtcaccttg actggagcaa gtattaattt ctgtcagtgg tattttaaat gtttgcatag
      301 acagagttat cgaggcaagt gtgagcagat tgtaggtaca actagagcag ctcctcgccc
      361 gaccgtcctt ttggagctct gatcaagtta ccttcccagt agtctcctta cacatagtct
      421 gtagtgtaaa gtcacagtag tattcaaaag gttaaaagca gagtgaactg ttaattttaa
      481 tgctttctct aagcttcagt tttaataagc gaaaatgatg ttcttatttg cagtaaagtg
      541 gtgttataaa attctgtctg tcaagctcat tttaaaacca tggaaataaa tgatctgaca
      601 aaatcaggct attagacaag tgaagaagag tgatttccat aaaagtagag gagctgttcc
      661 ttaatttcac acttggtagt cttttgggta gactaaattt ttaaataagt gataaaatta
      721 tattagcgca attgcatttt tatagatttt tttggtcatt gtactctttt tcaattcctt
      781 tattttaact caaaccattc tgctgaaagg ttacctctca acttatgtta cctcataata
      841 gtttctgctc acacaacaaa gctgtaggtt cacaaattct ccataaaagt acccagaatg
      901 accacactga tccaaaagta ttctaaagtg gaaagatcat cttattgcag tcacatacta
      961 ccgaaatact ggccctgcac actgcatttg actgtctcca gaagcacttc aaagcagttt
     1021 ggtttcatat atgaacattc tctttgcgag cagactacaa attctgtaat ctacaacgta
     1081 catgaaaagc gaaataaaca cgatactttt ccatgtccag g
//
LOCUS       KCKM01003378            1024 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53040apa ultra-conserved element locus
            uce-5166, sequence.
ACCESSION   KCKM01003378
VERSION     KCKM01003378.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1024)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1024)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1024
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53040apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1024
                     /note="ultra-conserved element locus uce-5166"
BASE COUNT          282 a          188 c          196 g          358 t
ORIGIN      
        1 cctgcaagtt tatgtctctg tgaacccaat tgctgttatt gatagggtta aatatagact
       61 tttcaaattt catgcctcat tttttggagg tgtcattaga taagatcaat aagactccaa
      121 agaattattt tagactgttt ttgtacctct aatcactaca tatatgctgc tattgtgcct
      181 ctactgtttg gggttttttt ataagtacga ataggagtct ctcaaattta gaagtcatat
      241 ggacaatctg aatctgtcag caagatattt actactgcca atattcatat gtgacacgac
      301 tttgaagttg aagattatga tttttaatag ctgtgattcc taccgttgcc tacaatcctt
      361 agttaagaga cataatagac tgtacactaa ccaaaaaact ctgtacggga aactgaaata
      421 gtgtcatgct tcacatatga ttttttgcat cttgattgtg gttttgtaat gttcatttcc
      481 ctttgatttg ttctagtaca tgactgctgc tgcacctatg caagggacct acattcccca
      541 gtacactcct gtgcctccaa cagctgtccc tattgaagta agtttatctc catccattga
      601 agcagagtga aagggtagca gaacttttat ctgatatgct tctttgcaca tggtctttga
      661 aagggactta aagttatgtt attttttttg aacagtggct aggagcttcc agcttttaaa
      721 attaggattg cacatttctt tttcttttat ttttctgtct gttttcttac cctcccccca
      781 ttttttttta attgtgtgca agggctcttg ttttgcattt gttttgttgt acagccggac
      841 atggaataaa acatcaggga ttatgactct gttttcccat tgtacttggg agggagatgg
      901 gaagagacaa gaaaacaaac ccagcaggca gaccatgaac ccaaaagagc ttccaagaag
      961 agacaattcc aagagggttt gatgcagtcc ttagcaagtg taggtaattg ctgaaacatg
     1021 tagc
//
LOCUS       KCKM01003379             810 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53056apa ultra-conserved element locus
            uce-3651, sequence.
ACCESSION   KCKM01003379
VERSION     KCKM01003379.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 810)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 810)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..810
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53056apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>810
                     /note="ultra-conserved element locus uce-3651"
BASE COUNT          208 a          198 c          192 g          212 t
ORIGIN      
        1 atgtcctttt ttgtcaagaa gaaatcaagt gacacatcca caaacagcag tggagacttg
       61 ccggcgcagg cagtgataga cgaggacttt tgctcactct cacatgcatc ggagagaata
      121 gttttttgtg ttaagagttc attacagctt cagccctcct actgcactgt ttcctctgaa
      181 atcaggggca agattaaatc tgttgtagcg gagcgctccg taatggctct gacagacgtt
      241 gtttttcctc ggcctcacat ctgggagtta cccagcagag cacttgaaac caaccaggtc
      301 agctctttag ttgagtttcg tgtctaatca gccaggaagg ctgaggcctc aggtcacaca
      361 tggaaatcac tagagctatt taagtcgcca gaggttatta ataaatctcc cactatttcc
      421 ttaagtaaat aattggaggc ccatctttca aacaagttat gtctggccat gttatggtac
      481 caattttatc cttccttttt tcccctcacc aagcaggaag aacaaatctc tggtgacaac
      541 aatggcaaaa ctgtgaatta taaacatcca tgtgtctctc atttgaatgc ctcctcgagt
      601 ttccttgaca gctgggggag agagaggctc ttagtctttc caccagagcc tgagccaccg
      661 aaactgctct cgcaccggca gagacttggg gaaagccgct cggctctgac ggctggggca
      721 aacgcgagac acattctctg ttaggtgctg tcaggcagcc cggttcaggt ccttctgggc
      781 tgccacgagg gaaacgaggg gaaaaatctg
//
LOCUS       KCKM01003380             880 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53071apa ultra-conserved element locus
            uce-1960, sequence.
ACCESSION   KCKM01003380
VERSION     KCKM01003380.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 880)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 880)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..880
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53071apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>880
                     /note="ultra-conserved element locus uce-1960"
BASE COUNT          268 a          160 c          169 g          283 t
ORIGIN      
        1 aatgtacaag aaaaattaag tttgatgatt taacatcagt gcaaattaaa ttaattcctg
       61 gagaatatat tttggataaa gatcaaataa atccctttag atggaaagct tgaaagaggg
      121 ctttgttgaa catcattaat tgtacaactt ccctctgcat tgattaagct cattggctat
      181 gagcaagaag gttgcccagc aagctatttt tttttttccc caagcatgtc ttgtttgaga
      241 gtgataattg tgcccagcag atcttgtttc taacgcttct tatatatagt gaaatacagt
      301 aatttaacag cttgctgggg gaacaagaat ttgttccagt tcctgattta aatgtttatg
      361 ctaattgcta tttattggct cagatgcaaa tgataggttg gccaaagtga aattttatga
      421 cgagcaaact cccccctttt gtgcaaattg aaaaagtgaa acaagaagag gatgaaatga
      481 gccgaagatg gtcttaatgg ctgcttttta atggggaaga taaaattaag actgatttac
      541 gtggccaact cccctgtttt ctcttatcag ctcatttggc aggaaaaatg gaaaagtaat
      601 tgttcctctt tcaatgtggg cctcaaacca ttatttattg gctgaaatta atcgctgttt
      661 atccttcatt cacgtggaaa ccgctctatc agcattatga accccagcaa ctcaactagt
      721 cccttgcaat ttagccaaca gcaagcacag atcctgatga gccgtgcctt aattttctgg
      781 gctgtgggag ttaatgaaga ctcctttctt aggtggacat atttgtattt ctacaacatt
      841 aataacaaag gcccgcactt tcttttctgc agcatgcaaa
//
LOCUS       KCKM01003381             833 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53087apa ultra-conserved element locus
            uce-3893, sequence.
ACCESSION   KCKM01003381
VERSION     KCKM01003381.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 833)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 833)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..833
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53087apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>833
                     /note="ultra-conserved element locus uce-3893"
BASE COUNT          233 a          154 c          181 g          265 t
ORIGIN      
        1 agaatattaa tgcttcatta gttcctgcta gagcttctaa ttagtaccta cgcaaatgga
       61 cacgacacct tcgcaaaaca gggcagcaac cagaaggtgt gttggggaat tctgggtgcc
      121 acggtggagg aggacggaga ggttgtgtta atcccccaat cccacaatag caaagaattt
      181 caactttcag acaaacaact tcatttacaa gtgtgtctct aattagctgc agaattagta
      241 aagcagagtt ttccccccat agatcggcca aacccctgag ggaggctgtg gaatagagag
      301 aatcgcattt ccaattattt tgttgaattg ctaatttagt tattgtgcct ggcgtaattg
      361 tgatgggtat tgggtgtgca attcaatttg ttttaaatat ttgtgggaag gctgatcagt
      421 aatggagctg acctatttca tggcccaaat tgagagaaga gactaaaaca aaaaaacagc
      481 tacaaagcca cagtttgtct cagtttttat tttgatgtct ctcatccctc ttaagactgt
      541 tgatgcaaca aaaggtttac attaaaagat gatggcactt tgatcttggg cttttgagag
      601 cttatagctt tggtacttct ttttcttggc attttaatat gtagatattt taggctaaag
      661 agttttaaat gcatctctgg agttcagtag ggtccggccc ctcacccaca ccctccacaa
      721 ttatattctg tttgttaagg tgatttatgt ttttaactat cccgattctg gtttgagaaa
      781 ggcctgaaaa ataactgctg gagctgtgtt tgctaatctg ggccaatttc ctt
//
LOCUS       KCKM01003382             308 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53102apa ultra-conserved element locus
            uce-5137, sequence.
ACCESSION   KCKM01003382
VERSION     KCKM01003382.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 308)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 308)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53102apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>308
                     /note="ultra-conserved element locus uce-5137"
BASE COUNT          106 a           49 c           44 g          109 t
ORIGIN      
        1 atgatcattc taaaataagc cttccctgtc ttttaaacag caggatttct ctaatactgt
       61 acatgccttt ataattactt tacttcaatg taatacttta atgaagccta gtttaattaa
      121 attaaatttc tccctagtgg taactcaatc aaaatgcatt ctaccctcat tatgttatct
      181 gtaggagtcc aacattgtaa gtgctataag aaaagctggt tttaatgagg atggtcataa
      241 tgtattatac ttgagagtca agttgcagaa actttaaatg tcatataatg aagaactata
      301 cattaaga
//
LOCUS       KCKM01003383             881 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53116apa ultra-conserved element locus
            uce-5477, sequence.
ACCESSION   KCKM01003383
VERSION     KCKM01003383.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 881)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 881)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..881
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53116apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>881
                     /note="ultra-conserved element locus uce-5477"
BASE COUNT          219 a          213 c          214 g          235 t
ORIGIN      
        1 ctaaccagag tgcagtttcc tgggatttgt tgatatgttg ataaataata ctccttatat
       61 ttctgtgttc accacgttgt catcccagcc ctgggagctt tctgaaatgt tattctctcc
      121 ctcaggccac gaagctgagt ggttctgtag ggagaagcat agtggattgg tacaggtgat
      181 ccaaaacaag tttcaggggg tggaaagacc taaggagttg gtttagtaga agcagcacag
      241 tctatctaat tacgttaatc ccatccttgt cctaaagcga tgaccgctaa ataaggcagt
      301 gaagcgaggg tttagaaagt gcccctgtag tcctgaaact ctcccgaaac agaaaaagat
      361 gacttttctc gttgctcacc acagccatgc acctgtttgg cctaaactgg cacctgcagc
      421 cgatggaagg gcagatgtat gagatcacgg aagacacggc gagcagttgg ccagtgccaa
      481 cggacgtctc cttatacccc tcggggggca cagggttaga gttacctgac aggaaaggca
      541 aaggaaccag tgaaggtatg gttggtgtgt gtccatgttg tgagtcttct gtctccctct
      601 gaactccagc catccaatct catgttccat taccctcaac gctgccatca tcgggtgctt
      661 tttccagtct ttcgcgtcta gaactagtcg tcgtcagtct cgtttccgta tgcttctaag
      721 tttcataccc ttctgatgtc cactaatgtg ataaaactgt gtgcagccct caccatacga
      781 cgaaggcctt ctcaagctgg aaccatctgt accacgtctc agaaggccgt catgaaaaac
      841 ttgcctcgag gggctgtttt catgggaaaa gaaattgcgt c
//
LOCUS       KCKM01003384            1169 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53131apa ultra-conserved element locus
            uce-1357, sequence.
ACCESSION   KCKM01003384
VERSION     KCKM01003384.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1169)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1169)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1169
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53131apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1169
                     /note="ultra-conserved element locus uce-1357"
BASE COUNT          316 a          243 c          227 g          383 t
ORIGIN      
        1 tataaattga ttttcctttt ccttttgctg taaaattgtt tcttacttga taaggcttaa
       61 aatgctaact gttattaact acctcttctt ctaccaaagt tttataaatt tccacggtag
      121 ctgatgttgg ttacagtgta atgatttcag gacaaggtac ccgatttatt tatgataggg
      181 actatcgaac tgctctgcta gcagcacagc taaagggggg gagcgataga tccacatttc
      241 taaaccatca ttttgatgta aggacattag tagcaaacta aggtgcattg atctggcctg
      301 tggggtcagg attagctgga atagccagtc tctctgctgg agcagtggtt attcctgcct
      361 cccagctatg gccatttcaa aggtcaggtg ccctgtaccc acttggctca gaggaattag
      421 acagaacatg agtctctggg ctgattactt aaccaaagac aaaataatga gtcctaagca
      481 aatactgact aattgaaagg gctgtaaatc cattacatat tggtcaggga taatcaggag
      541 tatttaatca cttttatcta ttcaggagca ctgaagctgc aacagcaaag ccctgaacct
      601 tgccatgtgc ttattattct catcattatc aaaattactt cacagctgtt ctttgctaca
      661 tcacctcagc tggagattta ctaacctgta aaatgttttt aatttggaag tcgagtgagt
      721 gtgagtggag ggtttttcat ttagctgtag ggtatcttta gaggagtagt acaggcgggc
      781 agcaaaaagc agggccacaa ataaaccagt ttgttttgta tgtctccgtg ttaactccat
      841 ctcctcttat gaaacttgtt ttttttccct tctgtgcttt cctttctcac gtgttccttg
      901 aaagcatttg acacatgctt attaaacagt caactgcctc tctcttctct tgaggaaagt
      961 actcctggct ttttgaaatc ccttttgctt gtttccatcc tctctctcct gaccctctcc
     1021 atcctgcatg aattgaggaa atttgctgtc actggtgagg atggcctcac aaaaatcaaa
     1081 ttaaactaac acaaaaaagc cccaaacctt ttaccatcca atctttaatg agtttgcagg
     1141 tgttgaaaga tttactgtgc tgtaattct
//
LOCUS       KCKM01003385            1058 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53145apa ultra-conserved element locus
            uce-7148, sequence.
ACCESSION   KCKM01003385
VERSION     KCKM01003385.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1058)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1058)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1058
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53145apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1058
                     /note="ultra-conserved element locus uce-7148"
BASE COUNT          343 a          187 c          198 g          330 t
ORIGIN      
        1 atctttgggc catgacaaat gtgtttctac ggaattgccc tattcttcag ctttcactga
       61 agtttacaag gtgcagatag aaatgaagat aaattaatct tagaaatttc atagcataga
      121 gaagactcat gcaaatacat ttgagacaaa ggaaaacaag gaaattcttt gttaaccatg
      181 ttcttaatga aatatttatt caatatcagc acagacgaac ttacatggga acacacatcc
      241 tatcacacat gcaagttttt catttagtgt atgttgctgt gacttatggc aatgctgaag
      301 aagcttaaca ttaggaaaac tgatttattt tgtgatcgga aaatgtatat agaaactaac
      361 ttttacacag gtaaaagtac ttgcccttgg ctattactta gcctgaccac ggggctttct
      421 ggaaagagca aaagctttat aagtgtcagc tcatggctaa atcaatgttt atgcatgatg
      481 tacctttgaa tagcaaacac ttgctgcctg caagctaaac aatgttttta tctgtttgcc
      541 tatttctggt ccttcaacca cagcacaggg tgttgcaaat cgcatttagt aacaattatc
      601 tgctggaatt tcatgaagag gaaagtagca tgattaatga aaagtgacac acagagatta
      661 cttttgtatg ctagtctcct tggtgaacag gcgactctgt tgaactgaag cctgaccttt
      721 gttactttta acgaggtcat cgtgaatgct aaatgcttga aagattagcc actacaaatg
      781 ttccagtatt acttaatgat gctgccacta acgaactgca ggtagccaat taaatataat
      841 gatacagttt tcacctctga aacaaaggtt gaataaaaaa agcgctaggt tttctgtcaa
      901 ggtgtttaaa aaacctcaga actcttatta aagtatgttt tcctctcaca taggtaatta
      961 agagtctaaa tttggataag tcaaagagtc taggtttgaa ggacctgtgt acccaactca
     1021 ccactggatc attgctcagt tgctgtaatg tttatatc
//
LOCUS       KCKM01003386             402 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53161apa ultra-conserved element locus
            uce-7467, sequence.
ACCESSION   KCKM01003386
VERSION     KCKM01003386.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 402)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 402)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53161apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>402
                     /note="ultra-conserved element locus uce-7467"
BASE COUNT          119 a           91 c           67 g          125 t
ORIGIN      
        1 gttaaaagcg agactgacag ctttatagat agggaaatgc tcagataaga taaacatgca
       61 caatgcaaac ttgtccaaag cttttacagt ctttctctgc gccacttcca gctcattaaa
      121 ttacagtatt actatagatt tgcagcaaaa ttatctttta tctcagcttc ttttaaagct
      181 atttggcatt tgctagtatt ttctattata aatctaattg cagattccaa acagacaagg
      241 gctcattaag ccttaattat gcacatgttg ttttccacaa acattttcat ttggactgct
      301 gcgagctgta attgttcaga aggcaccgca gcctcccatt acccacttcc ccgggatggc
      361 aaaagctact tttcaagtag gtcacggctc ggctcaacac ac
//
LOCUS       KCKM01003387             962 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53176apa ultra-conserved element locus
            uce-266, sequence.
ACCESSION   KCKM01003387
VERSION     KCKM01003387.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 962)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 962)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..962
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53176apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>962
                     /note="ultra-conserved element locus uce-266"
BASE COUNT          292 a          188 c          225 g          257 t
ORIGIN      
        1 tctacttatg gccatctttg ccaaaagccc ccaggctttc cgaagcgtta gatcagtact
       61 aaatgcatgc ttcatagtgt aatgactgga gcaggagtaa taaaaacgta cttaccgctg
      121 tcaaaattaa tctgttaata ggaaagtttg cggcaagcgt tctgtaactc agatctatga
      181 ggaaacaggt tccccattta cagaaaatgg agctgttttt tcttcagcag tgagctgcct
      241 attgtgtagg taattacaag aaggcctgtg ttgacctggc aatgaggtag tgtatctaaa
      301 tacctgaagt gacagagaaa aacagaaatg aaagcagagg ccccatctgt tagactgtaa
      361 tgattgtgct atttgaaggc agaaaggttt gtctgaagca gctggtttct ctccaagtga
      421 ccttttagca tttctgcttt tgctgtctga cagatgtgtc aactcaataa tttcaaaagc
      481 ccctgagtaa ataaccaatt gtgagcaatg atgacccaaa gcgatgacaa aatgggtgca
      541 cacacagcac attacagagc ataataccca ctgaaagaat ggggaacatt atggaagagg
      601 aaaaacattt tactctttat ttttgagtaa atggttttcc tgcccacaaa tcagttgttt
      661 tcgaggaaaa aaggaactgt gaatggaagg tcattgtggc ctgtttgccc ttggagcaag
      721 tctgtaagct ggctgcagga ctcaggtggc ttctaggagc tcaaaacaga cttcagctcc
      781 ttccctcagc ccactgccag caagaaggac tgaggactaa ggactacagc taattggctt
      841 tgtgaatgat tggggaactg cagagaggtg gctacaatca gacaagaccc gatgtcgatt
      901 aaagcttgct aaagagtttt caaaagtgct gaagatgctg cttttacctc gaacttgaag
      961 cc
//
LOCUS       KCKM01003388             249 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53192apa ultra-conserved element locus
            uce-7444, sequence.
ACCESSION   KCKM01003388
VERSION     KCKM01003388.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 249)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 249)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53192apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>249
                     /note="ultra-conserved element locus uce-7444"
BASE COUNT           77 a           40 c           54 g           78 t
ORIGIN      
        1 gtagtatgca gagtatacaa aattaccctg gcagtgctgc aaataaggaa gtttctgttt
       61 tgaagtccat atgtgtgtga gctcgagatg ccagctgggg tatttatgtt gcattgcaca
      121 gatgtaaaac tgccaactga ttttatacca aataaaggct aatcttttta tacatacttg
      181 gtgtcagagt tatgaagtgg tacataagaa tgttctcacg acttagccct tttaaaataa
      241 aagctgacg
//
LOCUS       KCKM01003389            1000 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53207apa ultra-conserved element locus
            uce-4540, sequence.
ACCESSION   KCKM01003389
VERSION     KCKM01003389.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1000)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1000)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1000
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53207apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1000
                     /note="ultra-conserved element locus uce-4540"
BASE COUNT          228 a          279 c          204 g          289 t
ORIGIN      
        1 tcaaatatta tgtggacact tgccccaaaa ccatgtagga tgattcagaa ctaagaaaag
       61 tgtaaaatct ttaaagtaga aataaactga aggtggtttg tctgaccaag ggggaatgca
      121 accacctggc acacaacccc tggctggatg aactatgctg gcaatgcctt gggtacctag
      181 agagacggcc ttagcacaag atcaaaagga ccgtattgcc tccgttgggg cctgcttctt
      241 gcatttgggg cttggagctc tgagagttct tgtgctgtaa aatctctttc acccctttgt
      301 aaaacccttc ctgtggagac ctggcaaact catcacaggt gcagacccgg cctggaggaa
      361 agagagccac tcatgggtcc ccacccccat cacctctaaa agaagctgct ttggagtctc
      421 ccctcatttg catggggaga tttaatttcc atcccttaaa tatgacgaat tgccgagatt
      481 tccttcagtt aatgctttta acagctccca ataaacttca ttaatcaggc cagctctagg
      541 cccaacgtgc agcctggaag cagctaattt gcctgatgag cccacgactt tagtgaataa
      601 acaggtggat aagccgaggg ttttatggcc ttaattacac tctaatcagt tcagcacttg
      661 gcgggcaaaa aggaagaagg aggagatggc tgcgagatca ccagcagccg ctgcttctca
      721 gcccttccct tccagcatca gctctgcttt cctgcttcat cctctcttct cctgttttcc
      781 cttcctggtg tttgcgtttc ccctgtgtcc tcctctcgcc tttccccttt tcctccttta
      841 tttccatcct cctgttccct tcccataaaa tcaacatctg acgagagaaa gagaggccgt
      901 tttgttcttt ctttcctgct acttgctgcc tgatttttat tattattttt cccctctccg
      961 taccttgttc cctctctcac ctctcccctg cctctgggcc
//
LOCUS       KCKM01003390             700 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53221apa ultra-conserved element locus
            uce-6462, sequence.
ACCESSION   KCKM01003390
VERSION     KCKM01003390.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 700)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 700)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..700
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53221apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>700
                     /note="ultra-conserved element locus uce-6462"
BASE COUNT          198 a          107 c          130 g          265 t
ORIGIN      
        1 ctaaagtgtt taagaattta tatggccatt ctttttctct cttggtggca ttagagggag
       61 gaagaaaaag caataatgaa tgcataacct acatccacag aaaatataac tggcctattt
      121 atgattatga tgcacagttt ggtcactaga aatatactgt tctgtaggtt tatgccttta
      181 gctgttattt gttaatggca actcctgcac acgttttcct gcaagtcttt tggatttcaa
      241 gagaaaatat gtccttcaaa caagttattt ctttgagaga tctttctgta agtaggtttc
      301 actgtgtatt gactactcat aatattttct gttatcatct tgtcagggtt caattcatta
      361 ctccattcat tattcaattt gttgggccat gagcatctga ataattgaaa actgcagaag
      421 tattataaat tttagtgtct ccatgaaatc ccggttttag ggtttatggc ttgactttaa
      481 gaaatcactg tctgttgaaa gttggcagat gaggtctcat ctttaaagca gaatcttatc
      541 agtgtggtgg tttttaaaat ctcttttgtt gcacacttaa gaattcacgt tgcctaaatg
      601 tattacatta tggacttttt taacagtttg tctgtttttt aattgctatt gccatctcag
      661 ggacgtgaag tggggacaga taaagaaatt aatttatttt
//
LOCUS       KCKM01003391             914 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53236apa ultra-conserved element locus
            uce-2925, sequence.
ACCESSION   KCKM01003391
VERSION     KCKM01003391.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 914)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 914)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..914
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53236apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>914
                     /note="ultra-conserved element locus uce-2925"
BASE COUNT          261 a          179 c          183 g          291 t
ORIGIN      
        1 cagccaatgc tcagaagact tcatagttat atttttttca gattgtatat agactcattg
       61 ctcagttgtc tttacgacta ttgaatggtt ttgatttgta ctagcctaat cttcattatt
      121 ggcttcaagc tactttatgc tttatggtga actgcagtta aatcagattt tgttacttta
      181 tcaactcttt tttgtttttt tttttttaat aaggctaaat tagcaacaat aatttccttt
      241 gcctacaacc ctgaatgggc atatattgaa aagtacaatg tagtattaaa aaaaaacaaa
      301 ccctggagat aaatgaatgg cagaataaat aatttatgct aatgaaatta ctgcaattag
      361 tagttccaca atgacccttt taaaagccac agctgttaat gtcaggaagt gctgtcaccg
      421 ctgaccttat cataagagaa agtgacaaat tgaaaacgca ggaaagacca atcctcaaag
      481 aggtctgttc gggaacgatt agtgttttct gaaaaccagt gtgaattaca accagctgct
      541 ctctggctct gcgtgtctcc catgctgtgc cattttgtta agctccatca caatagttat
      601 tttgccccat tgagacaagt tgtctcgggc cacttccagc tctaccggaa cccacttctt
      661 ccctcactga tttacaaatg aaactgttgg ggggattttc agggctgctg agtagagaga
      721 cctctcataa ggatcatgtg taaggaggtt gtcttttgct aggaagagct gttctgcggg
      781 gtgtgtgtgt gtcacagaca atgaaaggag aaaacggctg aaacgcgttt cagctggaag
      841 ccaagcgctg ctcaaatctg cataaaacgt ccattcctgc tgactaggct tgcctttaca
      901 agtattcggt tctt
//
LOCUS       KCKM01003392             873 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53252apa ultra-conserved element locus
            uce-437, sequence.
ACCESSION   KCKM01003392
VERSION     KCKM01003392.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 873)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 873)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..873
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53252apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>873
                     /note="ultra-conserved element locus uce-437"
BASE COUNT          266 a          166 c          153 g          288 t
ORIGIN      
        1 aatgtgtttg gagacctttg tgtcacactg agcatttctg ttgttattca attactctgg
       61 tttatttttt tttttctttt ccttttcaac acaggataac tacattatga tctgaatctt
      121 acccaacatg ttgatgcctt aacaaaatat ttctgcactt ccttgagtga taccaattca
      181 tatctctcta gctaacctac ccatcttcta agtactctct cttacccggt gaaaacgtgt
      241 atgctgccgt aatgaaatca ttgccgtgtc ctatagagta tttagatcaa caagaccttc
      301 acttattaga aagggcaggg tagtaatgct tttggcaaag ccattattgt ggtattggta
      361 ttcactagaa aggacagaaa tagaacaaca ctggcctcca taaacagttc caatttgatc
      421 tgtgtacatg ataaaatctt ggcttctcaa tgcatttagg tgctgtcata gctgttgttg
      481 ccaaataaga atgcactgtg atgttattat agtaaacagc acttaagcac agctggcaga
      541 attgatcagg gccacattag agtgaacttc agcagatgac tgacgcagca gaaacaataa
      601 ctgaatatgc aaacagttct tgcaatgaat gctctgggga tcaggcacca ttatttttga
      661 ctttgaacag ggaaaagggg cagatttgta acctccttcc acacaaaagg gttctgggta
      721 ttctgtaaac atctgactgc catttataat agtagctagt tacaaagcaa aactctagac
      781 tcccctgact atttacattt cattaattat taaagaaaaa atataaatat cagataagtt
      841 tgtttaatgt ttcacacagg attctttttt ttt
//
LOCUS       KCKM01003393             635 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53268apa ultra-conserved element locus
            uce-6360, sequence.
ACCESSION   KCKM01003393
VERSION     KCKM01003393.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 635)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 635)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..635
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53268apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>635
                     /note="ultra-conserved element locus uce-6360"
BASE COUNT          198 a          142 c          100 g          195 t
ORIGIN      
        1 ctgtctagct ccctttcaag cagagaacta tttatctact taacacagaa cataaccaac
       61 tgttgtaagt ttcatatatt acatttattt caaaatgttt ggcattatta atccttttta
      121 tattgttaat ataaagattc tgcttccaaa cctcgcaaat ccagaaagtt tattttttcc
      181 tttttgcatt gcatgcactg atgaactagc ctgctcagca agcatttaac agattagaca
      241 cttgaacatg gtttcaggca atgctctctc atgtttctgc gtattgcctg ataaacactt
      301 caaagtaaac cgctcataaa tatgaaatga aaagccgaga agtcgttatg cacagctttg
      361 agatacaaat ctctttattc ccctctgaag tggagtttga ttgacataat gagtcataga
      421 tcctgtccag ggacacactg ccttatcccc ttttcctcag gagacaggga gtctttaaag
      481 aaatccactt cagaacttcc tgatagacag cgacaggaaa gttgaacact gcacaaattt
      541 attatttcgt atgagcacct actttaaaaa ccgtgacata tgtcaaagat cgattccaaa
      601 gccacaaacg ggccccagcg tctaaacctc ttcca
//
LOCUS       KCKM01003394             833 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53284apa ultra-conserved element locus
            uce-6946, sequence.
ACCESSION   KCKM01003394
VERSION     KCKM01003394.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 833)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 833)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..833
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53284apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>833
                     /note="ultra-conserved element locus uce-6946"
BASE COUNT          238 a          166 c          161 g          268 t
ORIGIN      
        1 ggaaattctg ggcatacaaa gtaagaattg caatttaaga gaaggttatc ctgtatcaaa
       61 tttctctgtt acaacatctc tgttcaagaa atcctgtagc agttaaaaaa ctcttgcagt
      121 ttccaccaga tttgcagcat cgactaaaga gtaatgtgtc agatttgctt tgtataccag
      181 gagacccttg tcctttctgt tgctcttttc tagatttagc aaaattcagt ggtggtgcta
      241 aatcaaaggg aaaaagcact tggaaaattg tgttttctgg ggaaggctgt gtgtgtaaat
      301 gagaaacagt ggatagcagc agagtgatct cttgtggccc tgctagtaca agctttcccc
      361 atattgtctc ctgcttttat attaattaca acttgcatta tcagctgcga gtctgtagcc
      421 cagcaaatag aaaatactgc ccctggagac ccagcttctt gtatctattt tccatctcct
      481 tctattgtac tctactcagt attcactgct tttctcctgg taacactgct ctttaacaca
      541 attaagtaag agcaagagga gcaccagatt tgactcccaa ttattaaaac tactgggaat
      601 agatacatgc gtgctgtgta cctcgtatgg tatctgacat cagtttaggt catatgtgtg
      661 tgaaaatttt atagtatgca cacatacaca aagcaggcaa ttgcattttg gcagacatca
      721 tccacagtct tcaacgtgtt tctgcaaagt attttactaa acttgcaagg agatatgagg
      781 agccacacta acagtttgtg tgatttatct aaagctacct ggttttcctt tct
//
LOCUS       KCKM01003395             354 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53300apa ultra-conserved element locus
            uce-6229, sequence.
ACCESSION   KCKM01003395
VERSION     KCKM01003395.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 354)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 354)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53300apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>354
                     /note="ultra-conserved element locus uce-6229"
BASE COUNT          106 a           63 c           66 g          119 t
ORIGIN      
        1 gatggcagat gtacgcgaac atgtagtttt ttgtttgtct cccagaattt atttattttc
       61 ttgcgttaca caaagcaagt aggcagtcaa aactcttgcg tgcctgatat taggacgact
      121 taacaatagg aagtcgtcag tttgttttct agatcctaat gcagtggttg ccataagaac
      181 acaaattatg tgtacatttt aatgcatcta tgcttcataa ttatgcatgg ttgtgtgctg
      241 ttataattga cataaaatat aaaacaggtc aaagagcagc tattaaaact atttttcatt
      301 ttgcttcctg acagctagcg acatcaatgc ccgctgcatt taataggacc atac
//
LOCUS       KCKM01003396             680 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53329apa ultra-conserved element locus
            uce-6126, sequence.
ACCESSION   KCKM01003396
VERSION     KCKM01003396.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 680)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 680)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..680
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53329apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>680
                     /note="ultra-conserved element locus uce-6126"
BASE COUNT          172 a          139 c          130 g          239 t
ORIGIN      
        1 cccaaggatg ctcataaaca gcagaggcag taagagcctt ctgatgcgcc tggcagtgac
       61 tctgctgtct tagctcgtaa tccattttgc cctccctttg catttatatt tccttttttg
      121 cactttctct tcctttcttt tagctttgct tcttttcctc catctttctt ttttcgtgtt
      181 tatcccttaa atgtttaaga gtcttttatt tctagtctca gcctaacaaa aaacgccgtg
      241 ttcctttctt cgttcagcgg tgtgccttcc tggcactttt cgtttccagc acacctctca
      301 tgaggatgta aaatccaaga accagatctt tgagatttca aaataaaata aaagtaaact
      361 ctgctttaaa aacactttag caggaaagcc aggctaattg taaatcaatg agtcttaaaa
      421 tgcagcattg atctccagtt agaagtttga aggggaaagc agtaattact gcactgaagg
      481 tagatttttt tctctcagta agttctgggc agaaggaagg ctcattaggg cagcacttcg
      541 gaatctgagt aattagttta aaaagtactt ttgtggtgtt attcccatgg ctagaaatta
      601 tcagagtctt cacagattta tagttcagct ctgataaggt ttgatttatg attgtgtttg
      661 gcagggaggc tccttcttgc
//
LOCUS       KCKM01003397            1081 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53344apa ultra-conserved element locus
            uce-7000, sequence.
ACCESSION   KCKM01003397
VERSION     KCKM01003397.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1081)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1081)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1081
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53344apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1081
                     /note="ultra-conserved element locus uce-7000"
BASE COUNT          335 a          214 c          217 g          315 t
ORIGIN      
        1 ttgtcgaaca tcctttgatt cagagaataa aaacaaacaa gggaatattt aactgtttgt
       61 cagtgttata agtccactga gctctataat ttgttgaaga tttgttttct gacactttca
      121 ctagaaaagg gatgaggggg tgggggaagt gtttctccaa aagtattctg acccataaaa
      181 aggcccaact gcatgtgttg ggaaacatgt ccaaaagctt ccctatttaa ggcttttttc
      241 tctttcaaaa aaatgtcagt acctctttga atagatattg tccttggcca agaccctagt
      301 gaaaggcaac agatgttgct aagattatac ccaggctatc ctctatcctt tttcatttct
      361 gaaagggaaa aagagagaaa gagaagaaaa cttgctttaa atcactggac cattttgtac
      421 ctcagcgaat ctgtttgcac atgctcgact ggcctcgcag aaaaggctga gccttttgca
      481 ttcagcctga ggtcagtcct aatgctctgt tcagcagttc acacttcttt cacatggagc
      541 agctgcctct gattgctaga acaaattgag gtgattcagg ccaccagcag ggccatggta
      601 caagtgcttt tcaccagcaa gggagggaaa gccttagaac aggaccaact ggggctgtcc
      661 acaataaacc gtaggattag atttgataca ctcaatatta agacatgttc ttgctgaaaa
      721 gtaggctata ctgacataaa ctacaagaca gttggactga aaggagaagg gagaaaatgg
      781 tgttcaaaca tttattaagt tacacctgat tatttaattg ggaaacattt aaaaccgtaa
      841 cactgacagt tcaggcttga gaacatcctg ctacttaacc cttgggagaa cattcttgat
      901 gtaaatgcaa ttcaagatct gttgtgccat tcccacctcc aatattattt gaaacattgt
      961 ttgcaagttc tctaaactat ttctgagatt aatttacgga gaggaataat caacatcaca
     1021 attcctgtcc atattaccaa cctgtttctg tgattggaag ctgctacata gctattatcc
     1081 a
//
LOCUS       KCKM01003398             653 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53360apa ultra-conserved element locus
            uce-6860, sequence.
ACCESSION   KCKM01003398
VERSION     KCKM01003398.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 653)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 653)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..653
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53360apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>653
                     /note="ultra-conserved element locus uce-6860"
BASE COUNT          208 a          156 c          138 g          151 t
ORIGIN      
        1 catttcccta ggctagccaa gcagcaaagc gcattaagcg accggagata ccgtcatgac
       61 atatgcccga ctggctcttc accacccaac ttgccgaaca ctacccagtc gctggaagcc
      121 atgaatcgca ccgccctccc ttatgcggga ggtcacggaa cggatccgga cattcgctac
      181 gcttgatgtt accaaggacc actttactgc gatcaggatt ccaacgacca cctaatttcg
      241 tatctctcga atcgtttcga ccggggacct cgttattcgg aagcgttaca ggaagaacag
      301 ctctcaactt taggtatcag atctgggatc gctgcaatgt ggcaacttta aggagtgcat
      361 cgattacgtc tagaccggca aacacagatc tagaggtggc caagtgacac tggaggagct
      421 gactggaaag tcaaccaggc ccaaccaaga gtgaccaaga cagaacgatt aggataaccc
      481 acaggcactc ctcgtcataa ggccaacgac acagataggc tggcaaataa agggtttaat
      541 atgtggttaa aatggattta gaaaaaaaaa taaatatata tcctcataca tatacattta
      601 ttaatattaa aagttaaaat taactagttt ttaaaagtat ttaaattaca tta
//
LOCUS       KCKM01003399             829 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53376apa ultra-conserved element locus
            uce-3487, sequence.
ACCESSION   KCKM01003399
VERSION     KCKM01003399.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 829)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 829)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..829
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53376apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>829
                     /note="ultra-conserved element locus uce-3487"
BASE COUNT          249 a          165 c          171 g          244 t
ORIGIN      
        1 ttatcttggt cctgggactg cctgattcta ccgaggctcc tagcttctca gctctctggt
       61 tttgcactgt attccaactc gtcattctgt gtgatgctgg gatttaaaga ttttttaaaa
      121 gcgaaaaaac tcactatctt acgtctctta aaatgtcctg ggtcacattt aaacaaaggg
      181 cagagcatga catcaggctc cacgtcaggg agagctgagc agcagccaag atctgggagc
      241 tcattggaaa gcactgtaaa atgttaattt ggcgttgtgg acactgaaga cagaaataac
      301 acttcagata aacaccaccg agagatggta gttctaatca aaggcacagc acctcctttc
      361 atgcttgcga actagggctc caattatgtt cactgctctg cagctgaata gagctgcttt
      421 gccacacttt ccaaattgag aggagaggca gcagcagtgt cttccaaggc acgattccaa
      481 ataacaatta agcagaaaga gtcagataag agccaaacat gaaaatacag ggagttgaaa
      541 ataaactttt catgatgttt tcttgtaatt gcgatagctt ttgttatgtt cttataaccc
      601 gcccccccac tacgggattg gtcagagact tctgttcctt tatgccatgt catcgtggta
      661 ctagagtttt cttcattcat ttaacaaaat gaaaacaaga tctgaatttt ttttaaaaaa
      721 ggtgtaagtg atcctttagt attaaaatta gaaccctcag tcaaaaatct cctaacaaag
      781 ttttaaagtg gtagagtagc agagacagtt tttggtttgt tagtagatt
//
LOCUS       KCKM01003400             723 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53392apa ultra-conserved element locus
            uce-1895, sequence.
ACCESSION   KCKM01003400
VERSION     KCKM01003400.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 723)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 723)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..723
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53392apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>723
                     /note="ultra-conserved element locus uce-1895"
BASE COUNT          240 a          126 c          119 g          238 t
ORIGIN      
        1 tgaatgatac tgaaatcaaa atttcagttt aggaacttga gtgtattgtt gtgaaattta
       61 tatttatagc ttcatatttt cacaggagtc tggaaaccta gggatccatc atgctttatg
      121 caagtgcagt aggctttaga taacaggatt gggtccacaa tttgcttttc ttaaaatcta
      181 gagtaaaaaa ttaaaacaaa agctgccacc gtacaaacta caaaggtgaa aaaatgctgt
      241 gtcttgcatt ttcctacctc ctgtggctag ggacagaatg cagacatgcc acaataatgt
      301 tttttatttc tactgttcaa accatattaa tgagaacatc attttggaga actaattatt
      361 tctatttgtc ttgtgtcaca ctttctaatt cccctatatt agcacagcca aagcaaatta
      421 attgcttttc cagcagttga accttgtcca agaatgagct cacattccct tccagttttg
      481 cagtttctag gagtgcattg tgtcaaaaat ttctcttgat actaaacata gcccagagaa
      541 tatctttaca gatttctgtt gctgctcact tgatgaaatt tataagttta agtgacccac
      601 taggaaagat aaagttctta gctgcaagat tatacatcaa aacagttaaa gtgaaattaa
      661 aattaaatga atgaatctca ctgaagcaaa aaaagcagta attaatggtt cccttaattg
      721 tct
//
LOCUS       KCKM01003401             841 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53408apa ultra-conserved element locus
            uce-347, sequence.
ACCESSION   KCKM01003401
VERSION     KCKM01003401.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 841)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 841)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..841
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53408apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>841
                     /note="ultra-conserved element locus uce-347"
BASE COUNT          273 a          192 c          162 g          214 t
ORIGIN      
        1 acagcaacac aactactagt tgcacgtatc actcacatat aatggctgtt cttcctctct
       61 tctgtcctgc tttctcctac cacaccagcc agcacttcag agtttgatgg cataacacct
      121 ctgacacctt cccaaatcac agggaaccac tgccactgtc aggaaatcac actgagttaa
      181 tctctgccag ctcccaagct accacatcta tccatacgta taagcaacat ctaatttgtt
      241 gcacaaagca ctgtcaactt tgttcaacaa ttaaagtcgt taaaaacata aaagcaaccg
      301 cgagaagtgg aggcgtttgg gcctgttggg agatacagta ccccacatgc cttctgccac
      361 tgctgctaca gttaagcaaa ctttacagcc agtcaagcca tcatccaata gagcctattt
      421 gctgagcaac agtggagctt tgtggtttgc ctcacagttg acagtaagtt atgagccctt
      481 tgtgagcaca ggggaaggaa aacagagatc ggaatttggc aggaaaatat aatacagaat
      541 tctcctgtct atggaacctg aatttttgtg aaaacaatca agcattgttg aaagaaagaa
      601 aagcaacttt gacagatgaa atatagaggg gcccctttta ggaaaacagt aaacaaagca
      661 ccattcaggc caggtccatt ctgtcattta taaagatagt ttcttctgtg tggtgagagt
      721 ttacagcaaa gagttcagat tcaacaaatc aagtgtaaaa tctcccacag tctgcattaa
      781 aacagctagc taggaaagga caggaatgcc aaagagaaaa atatcacaag tttttctgtt
      841 t
//
LOCUS       KCKM01003402             649 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53424apa ultra-conserved element locus
            uce-7276, sequence.
ACCESSION   KCKM01003402
VERSION     KCKM01003402.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 649)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 649)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..649
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53424apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>649
                     /note="ultra-conserved element locus uce-7276"
BASE COUNT          212 a          107 c          117 g          213 t
ORIGIN      
        1 ttttctttgt tcacagtggg aggggaactg aagaagtggc ttaaatataa ataaactttg
       61 aactgcacgc atcaacattt gttacataag taggtttttc aaaataagtc atcctccaca
      121 acaactatac agaagagcta acctggtttt tttgtattct ttttgtgtgt atgttttata
      181 tcttgcatca atgagtcata agatgcagtc aaggaattaa tttgaagctt gaaagctaaa
      241 aggaaaagaa gccgatatgt gtaactctgt agcctcagat tcttgtatct aactacataa
      301 catattttct ttccacagga ggtagttatg acaaattaga agtctgaaaa ttttctgatg
      361 gtgtaaaggc tccagctgtc actagggaga tagtgatcag atttcatagc tgcatggtcc
      421 catggcacca ctaagagttc catatggtca tccaaatgtt tcaactaaat ccacacaaaa
      481 aaatttccag caaggttttt gcttttagaa aaataaaact cttctttgta agaatttttc
      541 ataaagtgcc accaataacc aaaattttct tgatgtggtt gtcttgaaaa gaaaatcatt
      601 gttagagtca ttctccttgt ttcaggttca agtgcataag aaatagtgc
//
LOCUS       KCKM01003403             825 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53439apa ultra-conserved element locus
            uce-1167, sequence.
ACCESSION   KCKM01003403
VERSION     KCKM01003403.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 825)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 825)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..825
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53439apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>825
                     /note="ultra-conserved element locus uce-1167"
BASE COUNT          293 a          118 c          165 g          249 t
ORIGIN      
        1 ctgagattga agatgagggg ataaaggtgt gataataacg aaagcagtgg gggtagggaa
       61 gtggtggtga tgaaacgttc acactggtca ctgttttctg aagaaaacaa aatgaaaagg
      121 ggcaagaaaa gaaaaattag tgtaatgagt agcttatttg tgaactgaag ccttctttcc
      181 ctaaagtgaa ggcaaaaagg gtcttttagc caaaggaggt cattccatgc aaacctctaa
      241 aggaaagagg atttttaacg ataaaaggag gggagagtat gcttcttaca ctttaatgat
      301 ttctttgctg ctcacagata ggaactggaa ctccacacta ttagctacaa atggcatttt
      361 gaaatgactt tttttttttt tgggcaaacc caaaagacat tgctaagatt tacattttca
      421 aatatatgct gacctttttt tcctctttct tttagttcat ttgtcatcag tatgtaattg
      481 aatcaatata tttcctgatc aacccaaaga ttgaataagg tcatgggaag ccatgtgtgg
      541 acattaaaaa tcattatttt actcaaaatg agcagagatg gcatagacca ttcagagttc
      601 caaatgaaat tctattagat tctattacac ttttacaatt atagagacgt tccaatatta
      661 caaggggaaa tgaagtcata ataaaaaagc ccagaggtgt attacaaaga aatgggcata
      721 ctatttttct agttaaaaac ttgatgaaag gagctctgct acttttcagt tgctgagatg
      781 tgaccttgtt cttaaagaaa attaaaaaaa aaaaaaatat atcag
//
LOCUS       KCKM01003404             960 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53454apa ultra-conserved element locus
            uce-3647, sequence.
ACCESSION   KCKM01003404
VERSION     KCKM01003404.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 960)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 960)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..960
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53454apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>960
                     /note="ultra-conserved element locus uce-3647"
BASE COUNT          298 a          159 c          166 g          337 t
ORIGIN      
        1 ttttaaccaa gtgaacaaaa gatgatgcac agctgaagaa atgctcttca caactgatac
       61 ataatttaag atgctcagtt acaaacaacc ggatatgtat ttgtgatttc atttgagcac
      121 agtccaatta tctgcagtcg gttaatgtct ttgtatgtgt agtttctgtg tgctgcttta
      181 cgtgttgaga agatgctcag tgctggtgtt caaatacaca caagccttga aaatagccct
      241 agcacttaaa gaaataacaa taaaatacca gcagttgcta tagggtgttt tgtgccttcc
      301 agttaatttt tgccagtcca catgtagact tattttgtag tggatagtat gatatagttt
      361 tgttaaacat atattaaaaa actcactctc tctttgtgtt aggtaaaaaa aattcaaaag
      421 aagaggctat ttgtttccta attgattttc tacgttagtt gttcattgaa tagataagta
      481 gtgcctgtga tatttgatta cagagcaagg cacccattta accttccgtt ctttcctggc
      541 caggatttca aatacaatac aacgtacctc ccttaggctc agtaggatta gactgctagc
      601 agtaatccct gatgctatga aatagagctg atagaacttc aactcacttg tttaggatta
      661 tgctcatgaa tttcagctca tctagttgcc ttaacccttt gggaacttgt gtgggttatg
      721 ctgctataaa taaaactaaa tattataata aacagtggta gaaacttatt aacgtctttt
      781 aacatttact tggtgatcaa aatgtaaaat tcacattgaa attaatttag ccactgagta
      841 taaatgctca gactttcttt taattccaat gttcagaagt cttttagagt ccaacagtgt
      901 ctttaactag ttcggtctca atttgtgcat tgatttttaa aaattatttt aatgaatttt
//
LOCUS       KCKM01003405             605 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53470apa ultra-conserved element locus
            uce-7778, sequence.
ACCESSION   KCKM01003405
VERSION     KCKM01003405.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 605)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 605)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..605
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53470apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>605
                     /note="ultra-conserved element locus uce-7778"
BASE COUNT          210 a           93 c          117 g          185 t
ORIGIN      
        1 aaatatatta taataaaccc ttcttttttc tgccatcaat aaaaaaaact gcctttcaga
       61 caacttttac ttatttaata gattacttca ataaatttac agaagatggt agtctgttta
      121 gccaggccta ttaaaagcat taagatttga gcactggctg ttaaaatgag taaatggcaa
      181 tatcacaaag ttaaacaaat gccaaaaaac attttccaga gtactgggat tgtaacaata
      241 ccattaatga gggcaaagag gttttaatgc aattttcaca ttctaaagtt tcaaaaagag
      301 gttttgagtt agtgcattat taatgttctg aacatctgga actatgtaag agccacagac
      361 attgagcaag tgcagggttt ccccactagg tctgatgctg accgatttcc tccctagcga
      421 aaagctggtt ttaagaagtt tgagacagta aaatgacaat aaccagataa gagataaaca
      481 ttccacagtg tctttttgct tgtagtgtgt gtggaggaaa aattgggagc cattaggttt
      541 gtgcagttga aaggtgaatt tgaaattaaa tagcaaaata gttgcttgca ccacagatgg
      601 ttgct
//
LOCUS       KCKM01003406             343 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53485apa ultra-conserved element locus
            uce-6981, sequence.
ACCESSION   KCKM01003406
VERSION     KCKM01003406.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 343)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 343)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53485apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>343
                     /note="ultra-conserved element locus uce-6981"
BASE COUNT          103 a           66 c           51 g          123 t
ORIGIN      
        1 aaatttttaa taataaatat ctaacaatta atgggctagt agccgcagtt gtcttcaggg
       61 cataatatct aatttccttg caatgtttca tatccttact tttcacgctg caacagtcta
      121 tcattaaaac tgaatgcagg tttctaccac ttttatttat ttttcaaatc aacttataaa
      181 tcagtgccag gccttgttac agatgagttc caataaatta tcagctgtgg acaaattctg
      241 aatgttaaac attctgtttc tcttcttaat gtgcttctgt attgccctct aagcctggaa
      301 aacatgacag acagggaatt ttggagagtt tcccccattt aaa
//
LOCUS       KCKM01003407             794 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53501apa ultra-conserved element locus
            uce-1163, sequence.
ACCESSION   KCKM01003407
VERSION     KCKM01003407.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 794)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 794)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..794
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53501apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>794
                     /note="ultra-conserved element locus uce-1163"
BASE COUNT          231 a          135 c          173 g          255 t
ORIGIN      
        1 tcataatgtt ctgttataca taacattaaa atgttcatta aaatcaatgt tgggctgctt
       61 ttcctttcat tccatttgac gtttatgaga gcatttggga aaaaaaataa ttataatttg
      121 ggcaaagtaa tttttataaa taatttaaaa ttgtttaatg acttcttatc tgaagccttt
      181 cctatctggc tctactgtta ggaattaaaa atgaagcagg caagatatcc tgacccgctc
      241 cagccttgct aatgctccat ctacaacatt tctaattagg cagaaattca tgtacttcag
      301 ctaagtggta atgaaaagtg attcatttgc tgaataagag atgagagtga gtgtaattag
      361 ctgactgcgg tttttaatct ttcaacaatt caatgtgttt aaattagttt caaagaatag
      421 gagctttcaa gtgttgttac atcaaagtaa tcaaggcagg ctttaacggc tgagtaggag
      481 agatcgctct ggttcctgtt ctgaaacctt taaacttatt tggaataatc atcttcaaaa
      541 cctctagttc taacacatac aaagactcac actggttcga tatatgcaga actgtggtgg
      601 gcagaaagct ggttcctggg gcggtagatg ggtgacaagg agaactaaac ccgtagttgg
      661 tgttgctctc gtcgtcgagc tgaaggggtg cggggcttct ccgtagcctt cagaagtttc
      721 ctgaggagta gggtgagcct attcccaacg ctgtcctttt agggtaagtt cagctagttg
      781 gctttgagtg gaaa
//
LOCUS       KCKM01003408             220 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53517apa ultra-conserved element locus
            uce-6552, sequence.
ACCESSION   KCKM01003408
VERSION     KCKM01003408.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 220)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 220)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53517apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>220
                     /note="ultra-conserved element locus uce-6552"
BASE COUNT           67 a           35 c           43 g           75 t
ORIGIN      
        1 attccataat cagtgtaata atacacctgg acttgttcgc gagatatctg ccttttgtac
       61 tgcgacagga cattaatagt aattattctg ctttgtaatt ggagctttaa atactaattc
      121 aaacagccag aggaaaacca attagtgcta atttatctct atgtgttttg gagagcctgt
      181 gtctgtcata ctgtgaagaa ataggttggt aattagtaca
//
LOCUS       KCKM01003409             324 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53532apa ultra-conserved element locus
            uce-3925, sequence.
ACCESSION   KCKM01003409
VERSION     KCKM01003409.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 324)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 324)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53532apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>324
                     /note="ultra-conserved element locus uce-3925"
BASE COUNT           80 a           82 c           71 g           91 t
ORIGIN      
        1 gcggaaagtc tcgaagtctg cttgacatct tgaagcttaa ataaccgtaa ggcattgtta
       61 ctccctggca gcaaagtgcc tcgttacgcc tgattgagct aattgctttg aaataggata
      121 tattatctat aattatagag atcttggagg agacggccag ccttttcttt catcttttcc
      181 aagtgcatca taatgtcgcg atcaaattaa tttgggccac ttgaaatagt gctctccttt
      241 cagcccggct ccttcgaccc tcaaagagcc ggggacgccc cggcggctgg agtttggcca
      301 tccaaatcac cactcctggt aacc
//
LOCUS       KCKM01003410             917 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53548apa ultra-conserved element locus
            uce-7684, sequence.
ACCESSION   KCKM01003410
VERSION     KCKM01003410.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 917)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 917)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..917
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53548apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>917
                     /note="ultra-conserved element locus uce-7684"
BASE COUNT          203 a          199 c          275 g          240 t
ORIGIN      
        1 gctgctttgt gtatcggaat agagcgttct gcgcgcagct gcggagcaaa gcagtcgcac
       61 gtttttgcaa acggatttat tgaaagtttc ttgcagtgtg ttatctgcaa gtccctcgct
      121 cctctgtcgt ttgcccttgg ctgcagtata accataaaac atttactgcg aagccgtgaa
      181 gaatccatat gtccctttga tctgtcaggc caccaagaag ccagggcttg tggggtagca
      241 taaggatatc tgaaggtgac acatgctgtc atttgatgaa cagagatgca gaagggggtt
      301 ctggcagcca ctaccttggc cttgacaact tgtgatggtg accaggtggg gtgtgttatc
      361 ttaatagtct ggagctcttg tgaattattt gctgatagat gtaaacagct gttattcttg
      421 gtaatggaaa gcaattagaa acatctgtac tcttggcgat gaataatgcc tcccatcttc
      481 actgctcccc agtgccaatt ggaaataact acatcatcag gatggggctg gcaactccac
      541 gctgcagtat ggccggatga ttagtactga gctgtgaaga acaagaggtg aagcacggtg
      601 gaaggagcct gtccctgcgc ttgctcggtg tctgcctccc ctctcgggag aagaggaggg
      661 aaggtgctgt tcggttgtgc ggagggaagc aaggtgctta atgcttcccc gtcagtcgtc
      721 aggtaactcg gtatcgagga gccttgaact gttttggctt ctggagctgt aagtcaggat
      781 caagttgtga tgcaatgctg agcggaggta ccgcaccacc acgtgtcgat gcgcgtgggc
      841 cagtgtgcgt gcctccgtct cgtgggcttc agctgggacg aggtggtggg tgtggaggcg
      901 cttcactgga gcgaaga
//
LOCUS       KCKM01003411             655 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53564apa ultra-conserved element locus
            uce-4465, sequence.
ACCESSION   KCKM01003411
VERSION     KCKM01003411.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 655)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 655)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..655
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53564apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>655
                     /note="ultra-conserved element locus uce-4465"
BASE COUNT          185 a          110 c          152 g          208 t
ORIGIN      
        1 gttcagtctc acgcctttgt tttaggttgg ctaaaccctc gacccttatt cttcgtgggg
       61 tcacgctcag gcaaccgggc agtgctgaat gagttaagtc gctggctgaa gtttggcttc
      121 atgcaactaa atttgaggcc tggtaggcat tagcagggca cagcacattt acagagctta
      181 attagtacgc gctgtaattg ttcatggtct gccagaagga gtaatgttca ggaaaagtgg
      241 agtcgttctt ctgcagtctt cagttttaaa acgataaatc acttgcatat ttgtgcagtg
      301 attcaaatgg agctgagacc tctccatctc aacatgtggt aaattgtaaa gtcaatgaat
      361 tgcagatgta gggtacagca gattctctaa gaaaatgcgg aatgaatggg gaagggtgat
      421 gctataaata cgtactgaga agatagctgg gtttctgctt gctgtgccaa ttataatgta
      481 ctaaagatac tagcaatttt gttttaatgt atttatttta aatttcttta aaccaaatat
      541 aggggtacca tgttacttca cttggtgagg tttttattaa tgctccagaa caatgggttt
      601 catatggaaa tgcgtgtgat agccctatta atacaaatta attcatcatg ggtaa
//
LOCUS       KCKM01003412             250 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53579apa ultra-conserved element locus
            uce-2190, sequence.
ACCESSION   KCKM01003412
VERSION     KCKM01003412.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 250)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 250)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..250
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53579apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>250
                     /note="ultra-conserved element locus uce-2190"
BASE COUNT           60 a           44 c           46 g          100 t
ORIGIN      
        1 ttgttgccaa aattcctttt tcttctgcca ttttacttct atggttgttg attatttgtc
       61 tgaataaatc tggcagctgt ttgccatgtt taatagagca gaaaggctac tctgaataaa
      121 gctatttgaa aatttgttta tatgaagtat ttgtaaatcc atgaaggtct cttggcgttt
      181 ctgtatcgct cgctctgtct tcctgaattc attctttgat gcaggacttg atgctggcaa
      241 atttaccaca
//
LOCUS       KCKM01003413            1080 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53594apa ultra-conserved element locus
            uce-276, sequence.
ACCESSION   KCKM01003413
VERSION     KCKM01003413.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1080)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1080)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1080
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53594apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1080
                     /note="ultra-conserved element locus uce-276"
BASE COUNT          356 a          195 c          215 g          314 t
ORIGIN      
        1 taatgggtct ccttgctctt gatttcttac acaaagaaag agaaagagtg ggcattattt
       61 acccataggt aaagtaaaaa ctataaagat aaaggcttct ccatgcaata tactgctcaa
      121 atgtaataat ccctgagatg cttgttttag caaatgaatc agtcacactg agctaaggaa
      181 gggagacatc tattactgtg ctataaatgt taaagaccct atttagaacc tttatctcta
      241 gaagaaacaa agcaattttt gctggtattt gtgtgacatc aataatggta ccttcctaag
      301 tagagactag atgttacaat tgcagtttgc tcaattcttt ttcactggtc atcagggaaa
      361 ttcatctaaa gcaaccaaaa aaacatagat atgtttgcaa tcatattaat aagaagagaa
      421 tgcaaggtag ctgccaattg gcagcagagt atgttttggt ggtttgataa ggatactaaa
      481 gagtttatga tgtgacagat gtttcactac actattgtga aatgaataga ttatgagaag
      541 taattagatg tacattggaa tcaatgctgt tatcatcgag gccttcgggc gatgcaatag
      601 atgagagtca tggcagcagg tggtccaatg gctcggagac aggaagacac accgcaggag
      661 actgagtgac aggtttcaca gatccagggg gtgagagatc tgagctattg cctgcatttg
      721 taatctttac tcatgtataa ataataacaa ctactattga cttcgtatgc tatgtcacag
      781 cctctgctac cccctacaca ctcacatgca cgcacatatg caaacacaca cacacagtat
      841 attctgtata ttctgcaact ttttccctca gttaaaacta ttcttttatt gtcatatgaa
      901 aaagaaaata tgcatacaac cctttgattt cagtgccagc tcaatgtttt ttgattaaaa
      961 cgctgaaata agaaacctgg caacagcttt gaatacagtg cagtgtattg tgtgcccagt
     1021 gcagaaatgt acatgcattt tccatgggag acttaactga aagtgaggtg caacagacac
//
LOCUS       KCKM01003414             971 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53610apa ultra-conserved element locus
            uce-5916, sequence.
ACCESSION   KCKM01003414
VERSION     KCKM01003414.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 971)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 971)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..971
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53610apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>971
                     /note="ultra-conserved element locus uce-5916"
BASE COUNT          289 a          169 c          183 g          330 t
ORIGIN      
        1 gttaataaag attaaagcaa gataaagtat aacgttgtag aataaattgc caagccttcc
       61 tagcagaaat gatagcatca cttgatttct ctgccattac tcatattgct gtttactgta
      121 gagtgctaga gaagtcccta atggtttaaa taaagtttgt cacattttac ttctattggc
      181 atgcaaattc ttcaaggata ggatatctgt taaatttctc tgttttattt cactcctgct
      241 tatgtgatga agcatgattt gtggtatttc acgtaatcag agtatcatta attttctgct
      301 aaaatatttc tgcatatggc catgcaaaat aagtatctgc catgccatcg gttggttaaa
      361 gaatcaaaat gaggatgaca gtgtttttct aaagaagatt tctctgaatc tttccaccca
      421 caggctctgt tgaaggcagt aaatagtcca tttttgttaa tgaagcttca ctcatacagc
      481 tgggattgtt taatatttta cgagtgttac tttgttttgc tctcaacgat ctcaggcagt
      541 taaggattta tgaatcgtgt ttttctcagc ccatctgcgg tttcctatct tccctggcct
      601 tgagaatatg tttaaattta ttaaagcgaa gcaaaggctc attatttcaa aggagagcca
      661 aagtgacaca gtgaattggt tattaatgga aaggcactgc catagggcga ttgaaattta
      721 atgatatcct acaagaaaaa aatgagggtg tcactttcca aaaagtcatg ctaaatgcca
      781 gcctttttaa ggtcctgccg ctaattttat gcctgcgcac agtaatgttt tcaaaagcgt
      841 ttaggaaaca cggaccagtg actgtactga ttatcctttt caccttctcg cctgttccaa
      901 atgggtttgt gcagtgagcg atttaatctc taaatatagg gaacgttaaa aaaaataaca
      961 ttgctgtttt t
//
LOCUS       KCKM01003415            1130 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53625apa ultra-conserved element locus
            uce-700, sequence.
ACCESSION   KCKM01003415
VERSION     KCKM01003415.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1130)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1130)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1130
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53625apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1130
                     /note="ultra-conserved element locus uce-700"
BASE COUNT          308 a          258 c          207 g          357 t
ORIGIN      
        1 tattttctta agtgttgaga ttccaccttc attactgaat tttgtctgag tctgttcaca
       61 gctagtcaca ggctacacag cagagttttt cccatcctta tctgtatgat tgtcctcggt
      121 acatcacaga aatatgtcac atggactcct ttactaagtt cccagttcgg ctgccagtga
      181 tgccagtcag ttccacaatt tacctgcacg aaggccatag caagcaactg ttaatgcatg
      241 gtctgaatag actaaactat gcaatccaaa gtcaacataa aaaccttact tatttcaaac
      301 cctgtggcta aagaacaaaa atgaaaccaa aaaaacaaac agaaaaggga gcaaaaatta
      361 cagaaacaat cctttctcct cacccatcgc cacctaattt tttttctttc atctatggtc
      421 agattagcaa gtcagcactg tcgataaata aactagagaa gttgtttatt tttatgtact
      481 actgagaaca gtgtcgtctt gtggccgttc tcgtagattg tgttggttta acaagcgtcc
      541 aacccttttg tcttgttgtt ttttgtcttt cctgctccct gtccccttgt tcccacaggc
      601 tgtgcgtttg tcacattttc tacaagggca atggcacaga atgcaatcaa agccatgcac
      661 cagtctcaga ccatggaggt acagtactgt atcatttgcc ctttctttgt tttctttgtg
      721 caaatgattg cgaatggtaa agccatgctc tcctggctca gatcagacac atgacaatca
      781 cagatttaaa ctttttaccg actcactcta cctgtctttg tgaagcttat ttttcttgac
      841 gacctgaaag cgcacagtaa ggttgctgtg tggtatccaa acacggctct tgatctgttt
      901 tcggtggcat tcagcggaaa gtaaaaaatg ctgtaaatgc cgctcctcac tcatattcag
      961 agtatatctg atgagtaaac tgcctttgat tttaacactc acacacaccc ggcccacaaa
     1021 agtttctttt aaatagattt ttaggtgttg tggtttgcgc tgctctgaga ataagctcaa
     1081 gagatttaac ctggccacgc tgagttacta gtgcatgtgt ttctctgcaa
//
LOCUS       KCKM01003416            1074 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53641apa ultra-conserved element locus
            uce-6782, sequence.
ACCESSION   KCKM01003416
VERSION     KCKM01003416.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1074)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1074)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1074
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53641apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1074
                     /note="ultra-conserved element locus uce-6782"
BASE COUNT          354 a          206 c          176 g          338 t
ORIGIN      
        1 aggagccact ctgaagagag ggtagcaatc tgtcaaagca gcggttattg tctagagcat
       61 tacctgtctt gcaggtgcta ttccccttca tttatcttcc agcctcgatc tgatggattg
      121 gggattattg ctcttttggc aatcagatcc tgaacatgtc tcctatttaa ctctgggctg
      181 taaaaaaggg aaaattaaaa accattatga gacctccata taattaatct tcagatggct
      241 tgaagcttaa gcatgtaatg tcctcagtat actgtctact ataacaagta acaggagcga
      301 aaagaaggca acatatcaat acgctttatc caagggaaga aattccagtt gtagcattaa
      361 atataaatac aatagtgtgt tggcataatg tactaaggtt cctgtactat taaaggcttt
      421 gttctaaagc gtatctgtgt acacaatgag atgatgaaca cagtgcatca catagctaaa
      481 tttaatatat gcaggggtat gatgtttgca atgcatgcat ttcagcaggt cccattagtg
      541 cgcctttccc ctccagtgaa aacagaatga accacagccc cttctggttt gcataaagca
      601 aacaaaatta gatttgcttt gctgaattga aacccgcttg ggattgtgag cctctctcgg
      661 ggacaaatta cttcaaacaa tccctttgta ccataacaaa atcaaaaaat tcaggccaat
      721 caacatggct caaaaccctt aacacaagaa ttaataatac aacctagtct atttttattg
      781 cttctgagct acagatcctt tttttaatat aattacactt atttgtggtc cacatgttaa
      841 ataagcttgc atatgttaac taatgtgaca taaaacaact tttataattt cactattgca
      901 accagttttg ttccccctag agtaacatcc ctaacatagg acaaactaaa ctttaattgc
      961 attaaattaa atctatatta tgattttttt ggcctatata gatagaatag tagacatttc
     1021 tgaagttaaa tatgtcaaaa acatttcatt taaattccac tctaagtcat attt
//
LOCUS       KCKM01003417             993 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53655apa ultra-conserved element locus
            uce-7912, sequence.
ACCESSION   KCKM01003417
VERSION     KCKM01003417.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 993)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 993)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..993
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53655apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>993
                     /note="ultra-conserved element locus uce-7912"
BASE COUNT          302 a          179 c          205 g          307 t
ORIGIN      
        1 acaaacagaa ataaaatata tattgtcctt tgagatgctc ttaaatcagt cacactgcta
       61 aactgcattt aagggattcc aacactaatt cctatataga tgataataag aaatatttac
      121 ttgagtcaga aagcttgagt aatgctgcgt tttggcgcta aaagaaaaag aggttttttg
      181 ttttccaggc agcttgcctt tggtgaacaa gcaagcttag tagagatcag ctgttgtgga
      241 cttttcagaa cttttctcat tcctgtgcca gggtgggaat gggcagtaca gtgctgcaca
      301 ggacatagca ggctttgtta aaatacgtaa gtgtgggaac aacaatgcag tgctagtgtt
      361 tggtttctaa tcctatggat acaggtaaca cccggaagtt tcaaggcaaa aagaatgtat
      421 ttcaaaaatg tctcttccgt atttatgctg tggctaccac atttgtataa acagaaaatt
      481 actccattca tgctttatta gctcttcttt tgtaccacag ccttgacccc agtcatcata
      541 aattgagaaa tagtggggaa ctaatggaga cagatgggaa tatggcttgc catttactca
      601 aattggtaaa gtaattaacc tcaaggtgct ggtttgcaag aaaaattgtt ggaatatctc
      661 agggcgccgg taaacagact cctgctttaa ccacttctga caactgcatc ataaactaga
      721 cttattctgt tcaattgacc tgtcaacgtc ttgagtccaa ataaagattt gtattacaat
      781 gcacttgctg agaagtggga gaacactact gctgtttctt ttcaaatggg ttgctgttct
      841 ctctctgcta gataggagct ggaatgtcat atattcattc ttcagccatt atattcctta
      901 gaaatcttcc attactgatt gtgtgacagc tttgtgacag cagatggtag tcatttggct
      961 tgagaaaatg aaatgaaaaa acatgggcca gac
//
LOCUS       KCKM01003418             848 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53671apa ultra-conserved element locus
            uce-5758, sequence.
ACCESSION   KCKM01003418
VERSION     KCKM01003418.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 848)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 848)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..848
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53671apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>848
                     /note="ultra-conserved element locus uce-5758"
BASE COUNT          280 a          132 c          153 g          283 t
ORIGIN      
        1 aaaaaaatcc ttaaatatat ggacaaagtg tgaatttaga aaatagacag agcacatatg
       61 aaatttctga taacagttat tgcctttttt tatatccgca gatatttaaa gaacaggtaa
      121 acaaagtatg gcatcataaa gcacattcca tggttacagc cagtgtcttg cagagctact
      181 taagtctttt tgtttttcta ggcaaaaaat caggcaaagc aaggaataaa agaagtgaag
      241 agtaagttaa aacacaaggt acgtagtaca ctttttactt tcttacattg cttcctgtat
      301 cagtctgaag cttatacttt acaaatcaca tgagatttgt gtttttaatg acttttgaaa
      361 tatgcttagc cctttgttca acaatacatt tttcataaca agccctcggg caactatctg
      421 tcattctatg catccactga ataatctctt tattgtttgc atattttatc gtagaacaac
      481 agaggtcttc aaagatacat taacaggatg tatgttttca taaagttgac tgctttgata
      541 tcacaatcga agcctttgct tcaagctgcg aatttgagat gggagagtct tgcagtacag
      601 tgtattgcag aaggtgtagt tgtccctttt aagatacatg aacaatggca acgtttaaaa
      661 acaaaggaat agtttatttt tgcgaaagta acactgcagg agtatcggaa aagatgattt
      721 aggtgtttcg cagctgcttt tcccgttgga aattttgttt ccaaataaaa tttctctgtg
      781 aggagaagga actggttttt agacgtattt tatgctattt taagaaaact ttcaaaaata
      841 tttcctag
//
LOCUS       KCKM01003419            1183 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53687apa ultra-conserved element locus
            uce-6874, sequence.
ACCESSION   KCKM01003419
VERSION     KCKM01003419.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1183)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1183)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1183
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53687apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1183
                     /note="ultra-conserved element locus uce-6874"
BASE COUNT          337 a          277 c          241 g          328 t
ORIGIN      
        1 tccccaaata catgtggtga tttacaccat taaacaatta ctgctttata aaatccaggt
       61 gaagttgatt tccaccattt cagtcaccat ccatagcact agcattcctg ccaacaggca
      121 cccatgacag tagagggaaa gactatattt taggctgttt gcaataagaa cctcatcagc
      181 agatatcaaa acctggatat ttacttaatg gtggtactgt ttttcaatta catgtcttaa
      241 aagccagcag caaatttttg caatatattc cgtaaccaaa tattcactct tctgaaatac
      301 caaacaagtc tgcacccaca tgcagcactc tgtctgagat catactactc ccactggtga
      361 aatcctaagg ttttggaaaa gaaaacccat ctggtttgcc agcagtggca aaatgtagct
      421 cagaagcaaa gtccagtgat tccattttta cccaaagggc tatagaagac cgtagctctt
      481 tctgtcctgc tgttgcttac cttatgttcc tccgcatgtg agacggtttc tgagccctct
      541 tctttttggt gtcctcagag gccaggctct tgtgctggtt ctgcaagagt cgctctgccc
      601 gctcactctg agatgaggta gttgaagtag agcgctgcca ttctccatcc tccgtgtgtt
      661 cagcgtggtc accactgaac acggcttcct ggggttggtc tgaaaagacg aggaggtaat
      721 gacatgagaa tgactgtgct gggctggcag ccggctttta catgagcact catcagaatt
      781 tgagctgaat aagaaccagt ctctattctc acgtgtttgc aggcatgttt ctctgagggt
      841 caaaattggg gtcctttctg acagccactc caagagtgtt aaaaagtatt acagtgaagg
      901 gcctgttccc aacgaaagcc aagactaaca ccactcaaca aagcccagaa gtgtcctgac
      961 aagaaaacaa gacaaaatta tttcaattca cgtagagcac ttgctgcccc taagggcctg
     1021 ttttcctaca gggacttgat gagcttcaat taaaacaaga aactcaaatc tctttttctt
     1081 tgtttcacag cattcaagtg gggaaaaatt tccatttatg gaacacatga gtaaccatct
     1141 tccaaggtaa aagagcatac cctgcaagag gttatctggt tca
//
LOCUS       KCKM01003420             952 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53703apa ultra-conserved element locus
            uce-84, sequence.
ACCESSION   KCKM01003420
VERSION     KCKM01003420.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 952)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 952)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..952
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53703apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>952
                     /note="ultra-conserved element locus uce-84"
BASE COUNT          277 a          153 c          164 g          358 t
ORIGIN      
        1 atgcataaaa tttttggtac ctcttgcctt gtttataggt ctattggtcc cttactaggg
       61 tcactgtgtg caatgcattt tatcggaagt gatataaaag taacgttgtt aaacctttct
      121 tttaaagctg ttttttggaa catatttgcc ttttactttg acatgtattt ctgtgtttcg
      181 ttttaagaag ttgacttgaa ctagattatt ttatgttcct ggaaaaaaag tgaagctttt
      241 tccttgaaag gtttttgcct gatttagaga tactgcaagc aatgcaactg ctctaatgaa
      301 gggatagcag ataatacgga gctgtgtgta ttaacatgat tttccttttt gtttttgttt
      361 tttttcagga gagaaataga aacaaacaat aactatatgg agatgtccta ctagaattac
      421 aacactaatg atgtagactt tggaaatgcc taatatgtct aagaagacgt tattaaagct
      481 tttttctgct taaggtgaca tctttgaaca ctttaacacg aaattgactc ttcttgtaat
      541 ggttctcatc agtgcatctg cccttatact ctctcaccaa acacacttga gaactgtacc
      601 ttcgtcaagc actttctgtc ctgaagcttt taccagtatc tgctgtcttt tgtatttatg
      661 catcctagct aaggcacagg agaccgaacg aatgcaagga ttcattaatt ctttgaattt
      721 gttaaatact aacatttaac cattagaagt ggttcaatga tgtgagattc acattgcttc
      781 aacttaattt tttctttgtt gtagtttttt taattgtcag tttttagcta ttcaacagat
      841 taaaagcaaa tcatgccata tttagtcctg gagtaaaact caagtctaaa tgttcatgtg
      901 aaaattattg tagtaatctt ttaatatggc aaagcaactt taagctgcag tt
//
LOCUS       KCKM01003421             992 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53718apa ultra-conserved element locus
            uce-7219, sequence.
ACCESSION   KCKM01003421
VERSION     KCKM01003421.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 992)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 992)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..992
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53718apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>992
                     /note="ultra-conserved element locus uce-7219"
BASE COUNT          299 a          211 c          182 g          300 t
ORIGIN      
        1 cagccgcagc acaactggta cctcatgatt tcaacgggcg gtttaaattg aagcaaatgg
       61 accagcaacc tctctcaaaa caagcaacag tagctgtagt aaggtattaa cacctgcttt
      121 tctttctctt ttttcagaag tccccagaat ggcctcttcc ctctcctcac ccccaggagc
      181 cgtggagaag agcaaaggcg actacgtcct gacgcgcagc acagcaaatc agttaaatta
      241 aacctgtatt tcacccgagt tgtacggagc gcaaacaaca tcgctaactt ttctaatttc
      301 atactctagt actcctaagt aaataagagt gaggaaaaaa aagtaaagtt ttccacaaat
      361 agaaactgtc acttactagg atgtgatctt ttcagctcat gcatcctaaa tgcatgcaga
      421 gatattatat gcactttcta tttagcaatt taattatatc tttgcagtca gagagtggca
      481 atggtttgca gtaataatca ggtgaaagca ttctcacatt aatatgctgg aatccgatgt
      541 gttaatttga tgcaactttg cgttgacaat atgtgattaa tttgttctaa ggctagctct
      601 gctcccagct ctgacagttt aaaatgctgg gtttctttat ccatatcgct atttgacacg
      661 ccttagccca ctgctttgct aggaccactg ttaatttgta atgaactggc ttttcagggg
      721 gctccttcat ttttaattct gtcagtgtca cctccttgag gaaaattata agtttcctta
      781 ggtgtgatta ctgccaagtg ctcctgataa gaggtttgag aaaacacggt tttataaaga
      841 agtcagtatt taatctgccg aaacagattt attgcctcca gacagataaa tataatagaa
      901 agttctttca tttgaaagta atttcaagtt ctcctttacc tccaacccca aaataagaac
      961 acctagacac aatagcaatg tttcagggaa ag
//
LOCUS       KCKM01003422             711 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53734apa ultra-conserved element locus
            uce-6579, sequence.
ACCESSION   KCKM01003422
VERSION     KCKM01003422.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 711)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 711)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..711
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53734apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>711
                     /note="ultra-conserved element locus uce-6579"
BASE COUNT          216 a          135 c          145 g          215 t
ORIGIN      
        1 agttcataag ttatgaggta attgcattag cacgctgaga aaagagaaga gtatgcaaga
       61 aatcctgatt ggcgtttctc tgtttaaaag gaattatttt ccaatacctg agcatgccca
      121 gaggagctgg tctctgagca gctgtgaaac agaacctttt tacttcaggg ttagtgcagg
      181 gagctcatta gcacagcctc aaccctcagc taaacagcct tgtttgcata ttgaagcaat
      241 agaatgtgaa ggtgttaaaa aagaagaatt gcagccgcta ctcctgactg acatgtctat
      301 ctgggctctt gtgtttacaa gagaataacg aagctgcccc aaagccccta ctgggcctga
      361 ttattatgca gaggcttctt agattatgta taattgatat ccattttccc tccagctaac
      421 caatggcagc tctcaggagt aatgctcact ctcctgcatc ttcctaacca agcaaacact
      481 ggaaattgct atcttttact aggcttaata atttttaaag accaaaaatt gacatttaca
      541 tttttcagaa gcacagatga ctacactgtt agtggggttt tcctgctaat aacaatcaaa
      601 cagttaagat attgtattta agggtgatat gtctggggat atgtttgtgt atcatttgtg
      661 tgtatttata cacacaaaca ttcaatggac tgtgtacata atgtatggga a
//
LOCUS       KCKM01003423             816 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53749apa ultra-conserved element locus
            uce-5098, sequence.
ACCESSION   KCKM01003423
VERSION     KCKM01003423.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 816)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 816)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..816
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53749apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>816
                     /note="ultra-conserved element locus uce-5098"
BASE COUNT          233 a          183 c          180 g          220 t
ORIGIN      
        1 gcttcagcaa gctcctttgc tgcctctgtt gagagcgcag tttggtctgg acctcattgg
       61 attaaaggtc ctaggaagtt atccccttat tttaagagaa acgctaatag tctgagcaga
      121 gttagctcta tttataccct gcctctgtta acaagtcaga aaaagtaaac ttgatttctt
      181 tgacaggcac acgcttccta tgtcctggtg gcagtcagac agatttgttg caagaaaaaa
      241 aagctggaaa gagttcaaaa ggctggaact ggcacggtgg gacccctgca tgtttctgaa
      301 tgcagggagg ccttcttaac ccctttagac ctaaagtact tccctatgct aagaatggca
      361 tttacttctg aaagagtact tgtctaaata acacggaccc gcggtcaggg gatttcccca
      421 cggcaagggg ctacacaatc acttgctaaa aggaacaagt aataggattg aagcaattaa
      481 agctagaata tcatatttta gcaaaggcag tagggaagaa ataacttatt taaacttagg
      541 atcgacagag cagtatgtct tcataatttc tcccggggct gctccgggct tttttcttct
      601 ctttggtggg gaggtttcca ggatgccggc tttaacgctg ccctccaacc ccagccgcga
      661 gacgttaaaa gtgtccctga attcctccac atttcctgac agccagatcc cattgtacag
      721 tgcattgctg acccctttaa cagcgacaac aaaaaaatag tagaagttca actctatgga
      781 aacctgcata aaggaatgta cagcattttt gcattg
//
LOCUS       KCKM01003424             384 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53763apa ultra-conserved element locus
            uce-2848, sequence.
ACCESSION   KCKM01003424
VERSION     KCKM01003424.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 384)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 384)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53763apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>384
                     /note="ultra-conserved element locus uce-2848"
BASE COUNT          136 a           75 c           72 g          101 t
ORIGIN      
        1 gaactcagct tcggattagt tcagggctca tctatcatgt cagacagcag ctaaattaga
       61 aaatgtgatc tggaataaat taaacgtgta tgttcggccc caaccaataa caagatttca
      121 aatgaaagta aagacaaatc agtggaaaat tggaactaag ctactctaat tttttttttt
      181 ttctcttctg ttttcaaatg tattttccag agtggatcac taaaggagcc agagccaaac
      241 aaaatcccac ctcagcgacc accacctcaa ggttgtttac agtacattct cgactgtaat
      301 ggcgttgcag taggaccaaa acaagtccag gctacttaga taatcgaggc taaaagcaag
      361 ggttaaagca aaaattagaa aaag
//
LOCUS       KCKM01003425             977 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53779apa ultra-conserved element locus
            uce-3055, sequence.
ACCESSION   KCKM01003425
VERSION     KCKM01003425.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 977)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 977)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..977
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53779apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>977
                     /note="ultra-conserved element locus uce-3055"
BASE COUNT          338 a          163 c          173 g          303 t
ORIGIN      
        1 cattatagat gtcaaaaccc ttgctgattt tgtttttttc taccatgagt atttagctta
       61 ttgaatttca cattcaaaac catctctagc aagcattcag gaattggtta cttggaagct
      121 cttgcattct gaacgaaaac ctacaaacag atatttcctt aataaactta cagaattaga
      181 aaaactggac atattaacat acatctctgt atccacggct gtaaaatgat tggattcttg
      241 tctcatcaaa tttacattgt ggaatctgaa tatagtatga ttaggcatta ttttaacaac
      301 tacattacaa tacaatttaa aataaaatgg ccctccatat cgcactaata tcagtgtttt
      361 aaataacaaa ggggattttt ttttaataaa ggaaaggatt agcatttagt ttcaatcagt
      421 ataagcaatg ctgtaccagt tggtgtctca aagattcagg attttattaa tattccagag
      481 atgcatttgt gttgcctctg ggtacactga aaagccactt aaactgcact taaagcagca
      541 ctacaggatc aaattgatgt gcatcaacca tttacaataa aacttgatta ttataaaggc
      601 atacatattt gcataattac atgtttgatt ttttgataat gcagcaccca ctacaaagtg
      661 ttgcttcatg tagaaaggca tcgtcaaaaa gcaccatctg ctgtagtgtt taacgcactg
      721 caatgtttga aaaattctga aggtagattt gtgtgaatca aagggaaaac caaaggagtt
      781 taactagaac aagaggctca gggctggagg aggggacatg gtacagagtg gactttttgt
      841 taggctgttg tctgtgtctc tctgactatt tttaaataaa attatcagag aagaaaggta
      901 aaagacaaca gagcagcaca tcctacagtc cacagaacat aggattcaga acttgagaac
      961 atttggcata aacacat
//
LOCUS       KCKM01003426            1158 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53795apa ultra-conserved element locus
            uce-4535, sequence.
ACCESSION   KCKM01003426
VERSION     KCKM01003426.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1158)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1158)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1158
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53795apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1158
                     /note="ultra-conserved element locus uce-4535"
BASE COUNT          341 a          218 c          237 g          362 t
ORIGIN      
        1 cctgttggac caaaagatga gtgtatttct tttgccttca tcatggtcta cccctgtaag
       61 tgtctgtgtg tgaaacggtc cttgaagtca atgagccctt aatgctgttg gttaatatta
      121 gatatctatc agcattttat cttagcgaga gtgtaaaata ctggcttaga acaatgaaga
      181 agagttcctg gagtcatccc aatgacttct taaagcagtt ttccctgcag tatacggggt
      241 ataaaattat tatggtattg atggagccgg gaggctggtc ttagccttga tcaagggcct
      301 ggagatccct gcaaaaagca gcaaagtaaa tgccaagcta catactgtaa aataacaaga
      361 agaattttta ttattgcttt tttccccttt tgtattttcc ttaccatttt gatcagatgt
      421 atgttgttta taacccctag tttactggcc ccaaatatca ttactacatc tgcactatga
      481 tatatgtttg gttgttaccc ttttaatgga taaaaaaaga tttaagtact tcattctgtt
      541 gcattttgac agctgttagc catcattttt ccattcacct gcatttagca atcccataaa
      601 gggaggcaat cttagaacta acaagagctg ggcactgcaa ggtgataatt ctgtatcact
      661 ttggcctata aatacctgac aggctttgcg ctgagtcagc agtctgtaac aaagtggcag
      721 ccatgccctt ttatctgtgt gagtgtttca cagcaattgg actatcagcc cctgcagtga
      781 aaatccatag tatcgatcag gctatttctc cactgtaatt cttttgtagg aaatccctga
      841 tgacaaattt tatctgcacc actttttgat cgctggtttg atgtaagcga tctccaaggg
      901 cagagttaag ctcctggccg ttccacatta tcaagcacta gctttattta ctgaaactac
      961 agttgtggtc accaacgaaa ataacaaagc gagagagaaa ggaggaggtg gaggaggctg
     1021 aaaattaaga gcaaaataat atttcaaaat ggagaagcga caggagaaaa acagttgctt
     1081 cagctacttg atctttaagt gtaagttata aaagcatgtg ccgcatttat aaacacctaa
     1141 gtagtaggga tatgtttt
//
LOCUS       KCKM01003427             725 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53810apa ultra-conserved element locus
            uce-6724, sequence.
ACCESSION   KCKM01003427
VERSION     KCKM01003427.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 725)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 725)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..725
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53810apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>725
                     /note="ultra-conserved element locus uce-6724"
BASE COUNT          254 a          109 c          112 g          250 t
ORIGIN      
        1 aaaaataaaa cacataaaag taaatctaat tatttaaaag tttcttgatg tatataaaat
       61 tcaaaactat taataaatac atctgataaa taatgatgat agtctccata tttctttgtt
      121 taattctcag ttttcttgca agaccttctt gaagtttggt tgtaatggat cattacgtcc
      181 ataatgtgct caatgttgga gtgaattttg aacagttttt aggctgcata ctgttttctt
      241 ccagataatt tactggatta aaattagcag tgtgaaaagc tgtagagaaa tctaaatgcc
      301 tgccaaatca aagaaataat cacattttta tgaatattta atatcatagt catggcaaat
      361 aaggcaagta attagtactt accataaatt tgcaaagtat tattttatgt aaatgttaca
      421 ttctactagt ttgatatgaa ttattcattg tattaccaga cgctgacaca aaccagcaaa
      481 cactcaaatc tatgcgttat tagtttactt acctttaatg atactgttta gagggtattt
      541 ttttgagatt actatttttt cccacatggg atggaaacaa gaagaaagtc atttaaagtc
      601 acctactgca cattccaata ttggagaaac tcgagatgca aatgcacaaa atgcaagttc
      661 tttcatgtgt acagatgaag agctctcagc tatgccttgc agagactgca caggcgatta
      721 ctatt
//
LOCUS       KCKM01003428            1085 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53824apa ultra-conserved element locus
            uce-2116, sequence.
ACCESSION   KCKM01003428
VERSION     KCKM01003428.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1085)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1085)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1085
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53824apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1085
                     /note="ultra-conserved element locus uce-2116"
BASE COUNT          290 a          210 c          254 g          331 t
ORIGIN      
        1 aaggaaggaa gaaaggaagg cttccaattt gtagaagctg aattgcagct gataagagga
       61 gagaggctcc tttgctgtgg cgacaggagc accagtttaa ccattagctg tgcagacctc
      121 tgagttcggc cgtcacttcc agcagggaaa tgcctctctg catgcagcgc aaaatcccat
      181 ctgataacac aagaggccct tttaggtgct gctagagcac cagtccgacc agtaacacgc
      241 cgttcactga atcactaatt ccagttggaa agttatctgc tgtctctagc agtgaaatcc
      301 tgactgataa gtgaagaggc tcatctgctg gtagcagagc ctccagttta tcagcgtctg
      361 accagctcat aaatcagact agtgtctgtt tttattttgt tttatcaaaa tttatttcta
      421 tcattgtaac agttaatact ttaataagag aacttagctg ggaacattag gaagttagtt
      481 agagacattt tgcaggcgct ttttcccttg tcagtgacaa ggtaaggtaa tcctatacac
      541 aggctgctat tgtgagatga gaaactggcc tccttcactg ccagagacca gatgcacctc
      601 tctctatcct aatctgtaaa cgacttaaag gagccttatc tcggggctct tctgcttcat
      661 ttcatgcttg atttacttta atttgtctga tagggcacaa ggatttggag acggcccatc
      721 tttctgcaga aaatgttcag attttttttg ccttggcatt gttgtgttgg gggttttgac
      781 tttttttatg tggaggaaat cttgctccag tgcagcaagc tgcttgagtg tgtttagatt
      841 taagctaccc cagcagaaaa gagtttgtga agtggtatga ttgtgtgatg ggccacattt
      901 acattgaaat cacattataa gatatatctg gactcctgaa gggagcagtg cagtggagcg
      961 cttgtgccca caagatactt tgaaagggct atatatagtg gcaacaattg atacgagatt
     1021 ttacaggaga ctttataaat atgtaaatgt gtgttatctg attgggttct ttggctacac
     1081 atctg
//
LOCUS       KCKM01003429             925 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53840apa ultra-conserved element locus
            uce-4908, sequence.
ACCESSION   KCKM01003429
VERSION     KCKM01003429.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 925)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 925)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..925
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53840apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>925
                     /note="ultra-conserved element locus uce-4908"
BASE COUNT          275 a          162 c          173 g          315 t
ORIGIN      
        1 tcccaaagca agtagtagtc acagttgttg aaatatgttt tgcagtcatc ttagtggctg
       61 tactacatcc caggagtatg caaaagtcca gtattcaagc caatgtcttt ttgaaaagat
      121 gttgatttgg ggtccttcag ctgtcatcat ggtcttcctg tgcagtgaaa cttggataat
      181 aaactgcaat atgcaagaaa accaatactt caagataagg ttcattatgc cattgtttgc
      241 ttttaaaatc ctgtgctatt tttactcatg ttcttcagct gggatgaaag tgtatctata
      301 acagtatgac taattatctt tacatgcatt tatcactaaa taaacttcac acaagacagc
      361 aagattgttt acttaagcaa tataatactg ggaatggaag atagctctag aacataggat
      421 tacattgcca gaatggcact atttattaag ctgtgataac gctaatgttc ttctttgatg
      481 tatagcatgt gcgacttcag ctgaacttgt agagagcctt aaggatgttt cattgaacat
      541 ttagtatggc agcaagccag aatacattta gcctaaaccc agatgacagg ttggtaatga
      601 ggtagtgatt gatgaccact gcttccgtat gaaaacctgc ttgatatgct gggggggaaa
      661 tgcattgcta gctcttttca tttcactccc tctgtattac ttattcttac tagtagagtg
      721 gatgctggtt gttcaatcct ggtttcattt ttagatgaga atcgagtact cagctgagat
      781 tttagaagca tagccttatg gctacatata tgtgtaattc aaatcctaat ttcagtgaat
      841 ttttattatc agaaataact gcaattatat cacctatgaa acaccctatg ttattcttat
      901 tacctgcctc tttaatttta caagt
//
LOCUS       KCKM01003430             441 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53856apa ultra-conserved element locus
            uce-3079, sequence.
ACCESSION   KCKM01003430
VERSION     KCKM01003430.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 441)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 441)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53856apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>441
                     /note="ultra-conserved element locus uce-3079"
BASE COUNT          127 a           80 c           98 g          136 t
ORIGIN      
        1 aatttggaaa cattttcgga tctatgagcc ttgaatggac aaatactccc tattaatatg
       61 ggacatggaa gagtgacaaa aaaactgaat ggaaactgtg cggtagcttt gggagaaact
      121 ggcgatgtgc ttcagctctt gccattacag ggaaggagag ggggggaaac cccttctgat
      181 taataactag cagggtaatg ttgagggctt tttctgcccg attgcctttt tgaattagag
      241 ccgatttctt cacacttcaa tagggcctgt ctcttttaaa atgactgaca gatttgtttc
      301 tccttttttc tctccctgag acttaatgat gtaaattttc taattagtta aatcacgttg
      361 cttaaaggcc ttaatattta ccgggcaagg aacgatagtc tagttcggat ctctcgaaat
      421 aaccagcgaa ataacattag g
//
LOCUS       KCKM01003431             797 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53871apa ultra-conserved element locus
            uce-2283, sequence.
ACCESSION   KCKM01003431
VERSION     KCKM01003431.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 797)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 797)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..797
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53871apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>797
                     /note="ultra-conserved element locus uce-2283"
BASE COUNT          256 a          140 c          139 g          262 t
ORIGIN      
        1 acaactgtcc ttgcccatgt aacagcaata ttgactaata ttggaacatg atgcttagag
       61 cagcttctac tgtttcagag ggatgagaaa ataaaatcta cagacgaaaa aaatcttcta
      121 ttttggtata cttaacacat acagttatct acgtgtccta tatatcattt aacaaattgc
      181 tttgcaattc ttacagggcg tggtataatg actgatttaa aatcactgca ttgcttaaac
      241 tgcattgttc ttcatcaagt tgagtcattt ttatgtgaag tgtcaagctc tctaacaaat
      301 aactgctgcc agacaaatca agttcctcat cttaaagcta cggctaaata gtttatagct
      361 ttaatctgct cactgaggtg tgcagtctat gacagtaatt ataaatgcaa ggagaaatta
      421 tagctgaatg ctttaactgc attaggagcc atttgatgaa caatcatgat tgcctgctca
      481 ttttcaacaa tagagggcaa gttagtgtca gtgcattaga ggattttcag ttctgctctg
      541 ctctttcttc catttaccac agaatgtcag ttgtctccta taaagtagaa aaaaagcact
      601 gtagaagctt taaacttgat ggttaaaaaa agacaaagga ggaaacagag agaaaaactg
      661 tttatcatta tgactcattt ttttgttttg cagcagcctt actttcaaat tagttcatct
      721 caggtagctg cttgtttact tatcagggtc ttttgaaaaa gaaatctccc caatcaagtt
      781 ggtaaatttg actctat
//
LOCUS       KCKM01003432            1161 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53887apa ultra-conserved element locus
            uce-5174, sequence.
ACCESSION   KCKM01003432
VERSION     KCKM01003432.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1161)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1161)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1161
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53887apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1161
                     /note="ultra-conserved element locus uce-5174"
BASE COUNT          356 a          209 c          228 g          368 t
ORIGIN      
        1 gatgagagaa taatgcaatt tattatatac tcatctagct ggaacaaaaa ctggaaatta
       61 aaaagacatt gctgagtaca aatgacttct aaatttgctt actgcagtta taaaatgaat
      121 caggtggttc ttggatagct ggaaaacaaa aaaaacaatc aagctgaaac acgtgtgtca
      181 gtatgaaaca cagctctgct tgttacttag agctgccagg tgaaatctga gcctcggttt
      241 gtgaaggaga gtcatctgtg gttttgaatt ccaagccctg actataactt tcttccatgg
      301 gtttttcttt agtagtccat gcagtgttgt cacgttaatt gtcaagagag taaccatatg
      361 ctcaaactag tctcctgcct cagtccaaat cttgttcctc aaatcatatg gaattctgat
      421 ttgaatgttt tcgtgtgtgt tttcaaaatg gagctagatg gaacgagtgg tagaaaaagc
      481 caatgccttg aacaaaggct gcagcgccag ggttggaagt agagttctct gagttgtatg
      541 gagctttccc attaatcact ttttcatttc tttctttcat tccaggtgca agtgggaagt
      601 acacctcagg accaaagaat tgtgggatac atttcctgca ctcacttgca agctattgca
      661 ggtactgtcc taatttgcat atcttggttt ttcactattt ataggcctgt ggtggtattc
      721 ctgtgcaaaa gtagtgagat ttgctcctcc cgtatttctg ataaagtgca gtgtgcgctg
      781 ccagtagcag tgaaatagtg aagaaagaaa gatagacaag tctgtcctaa acatccacgt
      841 tttcagtctc agagtattta agtattatag tacacaaaca aaaaatatcc cttgagagct
      901 tttcttctct ttctgttatt ttagcaaata cattactgtc atcactaatc agcatttaac
      961 tatgaatatc agcatataaa ctaaaatgtc tttgtacata actaagggat catcagaaga
     1021 tagaagctgg gacagacttt tccatcagaa attagcagtt ggaatagacc aaattctcta
     1081 tttttgacct gcaaatttca ttcataaatg gctagcaagt tgatacagtc attgaaaaat
     1141 cctcttggtc atgtttaaaa g
//
LOCUS       KCKM01003433             666 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53901apa ultra-conserved element locus
            uce-3282, sequence.
ACCESSION   KCKM01003433
VERSION     KCKM01003433.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 666)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 666)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53901apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>666
                     /note="ultra-conserved element locus uce-3282"
BASE COUNT          205 a          120 c          135 g          206 t
ORIGIN      
        1 aaaagtatgc ctgtaggcca aatgcagaag ggtatgggtt ttttccttgt ttccctccaa
       61 cttatatgag atttgtacaa tgaattgtaa tagaaggttc agatgacaaa aattacagtg
      121 gtgtagccaa gaaaaatacc catggggctt tttacttccc ttgtgcccag cctgaactat
      181 cagatcagcc ttctggactc aaatgcaaca ctgtcaatag gaatacatca tcttttttgt
      241 ggtgtataag agctgtcggt tgcaattccc attattccaa ggccaggatt ttccattagt
      301 gtagccacct gctgggtttc tctactcagg tttaatggag tctgaatttg aatttatcac
      361 catctgtggg aagacaggaa atgagaggag catcactaat tcctttcttc atttactaag
      421 cataagcata atctttataa ggagataggc agaagaagca gtgatcaggg agatgaagag
      481 aatattttaa ctcatattga catcagagct cccgatcaag aagaatgctg tctgctcttc
      541 agccaattcc agcaacaaaa agaatgtttt aatttcctat gtaatgttgt acaaaaatat
      601 gcagatatgg gatactattt tgtttatgct tccaaggagg tctctaaaga ttgaataatt
      661 tagcct
//
LOCUS       KCKM01003434            1030 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53916apa ultra-conserved element locus
            uce-338, sequence.
ACCESSION   KCKM01003434
VERSION     KCKM01003434.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1030)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1030)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1030
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53916apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1030
                     /note="ultra-conserved element locus uce-338"
BASE COUNT          328 a          162 c          199 g          341 t
ORIGIN      
        1 cttactgaga acaaaaggca cctggagatg ttaactatat actaaaagaa aacttggaat
       61 ctaggaaata ataatattga agcatgactt ttcttctctc agttggttca ttgggaatgg
      121 tatctaatga agagttgtct aaaggcttgc ttgtttggaa ctaattaaag agagatatcc
      181 taaatagaaa aaggatcatg ggaattgtat taggtgtctg gagacttgtt attcttttgg
      241 tactctgagt agattgtgga agttgttagg gattcaagaa ataaggcaag ctaataaaaa
      301 gttctatttt tctggttatt ggccaactat tgtatttttg tttgcaataa gatttgtgcc
      361 aacaggctag gggcttgaat aaaacattta aacatttgtg cattaacaca ttatggtgaa
      421 aagagagtct tgtgctttca ctcagtgcat ttcagccttc aattaatgtg aaagcactac
      481 aatgcctatg caacttctct tgcctagtgg tgcaccattt atcattgcag ttttacattg
      541 accttgacac ccacttcatt agaataaaga ttgtctacca tttaggttac attgttcctc
      601 tgcacagaga ccccatgcaa atttctgttc agatagaaga gctgtgagcc tgtcagaggt
      661 catctgcatt aaatgattgc agctattttc caactgcttc ttttcattct actcaattca
      721 ggctaggagg atcaatcaag ccctctgcct gaaacagtgg gactgctggg aatataactg
      781 tttttggtag tagtggatat gccctaaaca gtattaaata tttaatataa attcattaaa
      841 gggcatacaa agtcttcaaa aagatattac atttatagta aaatttaaag ggttgggatc
      901 acctgccttt aaaaaaaggc agaacaatga gtaccaactg cattattttt taatgtaggc
      961 aaaattagtt catgaagtta cttaatattt ctttcaatgt gtttatttct ctagtggaca
     1021 cagaaaggaa
//
LOCUS       KCKM01003435             931 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53931apa ultra-conserved element locus
            uce-1158, sequence.
ACCESSION   KCKM01003435
VERSION     KCKM01003435.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 931)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 931)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..931
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53931apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>931
                     /note="ultra-conserved element locus uce-1158"
BASE COUNT          281 a          195 c          171 g          284 t
ORIGIN      
        1 ctgtagaaat tggcgcgtcg aatgcaaatt gctgcccaga ctcattcctt aaactgccac
       61 aagcctcctt caagtccaga attcagggac tgtggaatga tatatattta aaaattccca
      121 gccaccaaaa aattgtgaat actcagctac ctgtataaaa cacaatagtg tcctaattat
      181 tttctgaact gttctgaaaa gtatagcttt tgtaactttt tgacattcca gatttaaaaa
      241 aaaaaaaaaa attaaaacag tgccaccagc ttgcactatg agcagcctgt aataacagtt
      301 aaaaaagctt tctgaactat ttgacaagat ttcttagtgc tgaggccata tgctgtagcc
      361 tttaagctat ttcttcctat cagtttcatt atcacctgcc tctgagtctc caatatcatc
      421 agtaagcaca tgcagaatca taattatgcc atgtacaagt tctttgataa catgtacagt
      481 tttcttctta attctttatc aaatgcattg atcgtggcat gtgtgcattg atccaggtcc
      541 accatctggc tgtgtgtgat aagcacagtg gcatctttgc atttccactg tcattcattg
      601 cgctacaatt tggctgcagg ggagtagtgg ctgggattag ccctgttctg ctacttactt
      661 gcattttaag ttgacacctc tacagcggct cagaccacat tacaaactga aacacatacg
      721 cgcgacttag tgatgtgaca ctcctcaata agcttactcc actagctact caacaatctg
      781 taattggatt tgtaggaata acagcaaaag atttcctaag aattgctggg gacagaaggt
      841 gaagttttct cattattggc gaaaggctag gtatagatcc taggcgattg gtattttcca
      901 ttaaaaaaaa gctgccagca gtttgcagga c
//
LOCUS       KCKM01003436            1016 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53947apa ultra-conserved element locus
            uce-2277, sequence.
ACCESSION   KCKM01003436
VERSION     KCKM01003436.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1016)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1016)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1016
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53947apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1016
                     /note="ultra-conserved element locus uce-2277"
BASE COUNT          286 a          157 c          186 g          387 t
ORIGIN      
        1 agcccagtct atacagaaac aatgtaatgt tacagaatat aggatgatgt gcaatctaga
       61 agcatctatt gaagttttat tttttaatgc aatactttgg tttcttaact atttattctt
      121 tgagtaagat tctgtatctt tgctaaaggc tgaagtatgt gcctgtggaa gctggtagag
      181 gaaagtctga attgaaagtg ttgcttcatg agtcctatta actccttagg ggtgaaacct
      241 agtatctaag cacagtggtg tcagacaaat ttttaagtaa ataaaaacgg ttgaacatta
      301 actggaattt taagctgatt tgtctaagtt ctccatctac ctacttagat taattcaggt
      361 gatgttgtgc atgtggtcta aattgtaaaa ttttattaat agatggattt cttactgtgg
      421 cacgtgttat accttgcaga tacttggtta ctttgactat gctttcacag ccatctttac
      481 tgttgaaatc ctgttaaagg taatgcattg ttaattgatc cttgttagct caaaagcagc
      541 tttagcaata atgtttgtaa ctttttgttt accttccaga tcctagggta tgcagattat
      601 gtcttcacta gtatgtttac atttgagatc attttgaagg taacaggttt tcaaaggaag
      661 tttgtttaaa aggattttcc ttgtgtgtca cctgccaaga aaaggcactt gacgtgttct
      721 tcgccttttc tctaagcgat caaagctaaa ctttttttta aaccagagga tttttttatt
      781 tgacagttcc tcatagtttt gattggttat tttctaccat tgggtgcatg aagaagctga
      841 ttttttatca ttacatcaat ttagtaattc attttttacc ctttttaaac ttacagttgt
      901 tagaaaaggg aaaaataatt cactgcgcat gagcttttcc ttctccttgc tctggcattt
      961 ccaaaacaga taatcaatct tttaaggagg gagcatgtaa tttctcattt cttttg
//
LOCUS       KCKM01003437            1018 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53963apa ultra-conserved element locus
            uce-5755, sequence.
ACCESSION   KCKM01003437
VERSION     KCKM01003437.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1018)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1018)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1018
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53963apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1018
                     /note="ultra-conserved element locus uce-5755"
BASE COUNT          307 a          185 c          223 g          303 t
ORIGIN      
        1 attatcatag tttggcgata gctccataaa ggtcaggagg gtaaaactgc aggaaataaa
       61 agattccagc ctgaggtttg tctgaagatc ctccatctga gttctaacaa gacttattcc
      121 catcttaggt acccagacaa ctttttctaa tccatgaaaa gtcgcgaggg gcaacttcga
      181 gctgcaaatc ccaccttcca tatcactatt ttaacagatg aggatgtaaa gcagactgcc
      241 agggggcttg aggggctttc tttcctgcca ctcgtttttt tatcaccaat cctgaacaga
      301 ccccaaaact cagactaatt aaagacaaat aattaagcac attcagactg ggaaggttgg
      361 cagactccca ctgtattgtg agaccacctt ggcacttaaa tggttaggga ctatatccca
      421 caacatcatg ctcatctcat tgtggtagag agctcttgag aatgttatta gctgggtgtt
      481 cgccttgccg tttttccaca tgaggcagat gggtaattac gaagctaata gtctgattga
      541 gagaaatcag atgcagtggt ttgcccaatt agatgataca ttagcttcct tctttgtaag
      601 cagctaatgt gtgaagcaaa gtggtatttt tgagggtcag aatccttaaa caagtgccga
      661 gttgcagatt attgtgtctc tctttttttt tctaatggag gaaaagtgct aagtcttcat
      721 tactaaaagc atagaaaatg caaatcaggc tctgaaacaa aagagtgaag ggacaggcga
      781 gaatatttgg tgtccaatgt gtcaacctac aacatcaatt acattgaaat gcaatgcatg
      841 ggagcctaat caaggatagt ataattgtaa taattgcatg cttttgttgg agagctgctg
      901 ccattgttat tgtcaaccat ttgtttttct ctattgttta aggggagagt atttaaaata
      961 tatatatgtg tgtgcattta tgactgcgta aatgagtgaa gaacagcata ggtagaag
//
LOCUS       KCKM01003438             688 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53978apa ultra-conserved element locus
            uce-5254, sequence.
ACCESSION   KCKM01003438
VERSION     KCKM01003438.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 688)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 688)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..688
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53978apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>688
                     /note="ultra-conserved element locus uce-5254"
BASE COUNT          166 a          152 c          164 g          206 t
ORIGIN      
        1 ccaaaccatt aagctctact attttttttg gagtagataa ataaacagct tgttgtccag
       61 aaggacctac taacccttct tgcatctcct cagccactcc aaccccagct ctggaaccca
      121 ataatgtgtt tgtcagagcc agcgacatcc aggtgatgct accagggatg ccaggctgag
      181 cccgggcaag ttgggacacc caagggtgcc cagggtgtgg gatttccccc cgtctttccc
      241 tgggatgtga cagctcctcc accttgctgg acctggagag ggcagcagag aaaagcggag
      301 catccttggc tggctggagc aggagcagct gtgtttcagt atccaaacac acttctctgc
      361 gaggagggta atttagagca attacaccga ttattattgc ttttctaatt agtgcttttc
      421 ctacagaatt agctgagtgt ttattaggag ccgcttgttg ccaatagctt aactgcttca
      481 gtaccagttt ttgtcaaaca ttacaggggc ctaatcttat tatttatttt ttttttcccc
      541 tgtgtgtaac cagttttgtt atctggtttc acataaaagc cccaattaaa tattcatttt
      601 gctttgttac atatggcatt aaattttcat gagctgtatg ttcttgaaat ttgggggggt
      661 cggaggcagg gaagagaggg ggggaagt
//
LOCUS       KCKM01003439            1099 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 53993apa ultra-conserved element locus
            uce-5219, sequence.
ACCESSION   KCKM01003439
VERSION     KCKM01003439.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1099)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1099)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1099
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53993apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1099
                     /note="ultra-conserved element locus uce-5219"
BASE COUNT          305 a          189 c          208 g          397 t
ORIGIN      
        1 tttcctgaga aatttgaaca gagtgtgggt caaaaacaaa tatcataaaa acagcagttg
       61 cttatttaca gcttgtctaa cctgagaaac atttcaagcc accactggag gaaaataaaa
      121 attcaagaac gtatctaaac tgattttagt cagctgctgc taaaggatgt ttagggaggc
      181 caaagattaa aatagactga cacaatcctt ctccatacta gcccacctgt gctcttggag
      241 tatctcctaa ataagcagta ttggaagagc gaggtagtca cagcagcagt actcaataag
      301 tactggtatt agccctcctt ttcttcttct gtcagtgatc tagtgtatgt ttttcaaaac
      361 agttggtctt gtttcagtct ttgaaaagtt gtgtgtgaaa ttatgatact gtgttgattt
      421 ttagtgtttc taagcatatt ctataaaact gtatctctgt tacagacatg gcaaatatgt
      481 atactctact tcgtgctgtg tcaagtggtt tacctcatat gattcaggaa ctacaaaacc
      541 atatccatga cgagggcctt agagcaacca gcaatctttc tcaggaaaat gtgagtttcc
      601 tcaggcagtg gaaattacct atttgattaa cattcctgat gaaatgttta cccttctctt
      661 tttagtctgg ttggtttttt tagttttgtc tatatgaaat tggtttggaa cacggtggat
      721 aaaattgtaa ctttgaatca gcacgcttag ctgtgcaaca ctgagagttg attgttatgg
      781 tctaactaga aacaactaca gctagatact tctcgttgtt cgtttaatgc tgtcatggca
      841 aataggtcct tttgttccgt gtatatattt ttttttcctg aatttctcag tggcatttgc
      901 tgttctggtg cgttaggaac caatgattcc atttagttta attatatgtt gtttgtaaag
      961 acttgacatt ctgtcctcat tgcagtgtgg tcatcttcaa tgatagcttt atagtctcat
     1021 gttttcctgt aatttctaaa aatactgtag cttaattatt ttactagagt gtgttaagct
     1081 tttttcattt ccgatgtat
//
LOCUS       KCKM01003440            1010 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54007apa ultra-conserved element locus
            uce-7807, sequence.
ACCESSION   KCKM01003440
VERSION     KCKM01003440.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1010)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1010)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1010
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54007apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1010
                     /note="ultra-conserved element locus uce-7807"
BASE COUNT          334 a          229 c          209 g          238 t
ORIGIN      
        1 aggttggaag gagtatttcc tgctctgcat gcctagcttt taatttccac attgtgtccc
       61 catggccatg ttttgctgat gacagagtct gactgcaaat ctcatacctg ctatacacta
      121 cgttttctca gtatctggca ctgtgatatt aaataactat aaaactagaa agccaaaata
      181 actaaatcac ctggcagcca atttctgaga gttaaaccac aaacccggaa aatggtggag
      241 tgtgttgaaa taatgtaaag gaaacccata aattcaaact ttatgttctg taaagaacaa
      301 atatgaaaaa ggcatcaaaa taatgaaaga ttgtttatgt attctggcat gaaatgggaa
      361 tgtgttatga gagagagcgc aatggcagag acagatcgac agagctgaca gtgtggtatt
      421 catcctgcat ggtacagcag acgtcctgct agtggcagtc gacagcgcaa taaatcaagg
      481 gctctcgatg ctgtacctac agcttattac atccaagatg acaaataaat aataatccct
      541 gtcacagcgg ccctttgctc aaggattgag cctgaaacct tttgctcatc actcctggtc
      601 ttaagtgaaa atactagaac aagggaattg aaggccacgg tttactgagc tcatgaaaca
      661 caaagcaagc tggccacagg aactggaacc aagcaggaaa ggtcaagtag caagaaagga
      721 taaatattta aataatccca gcaaaaagat ggcaacgctt cacagatgtg aagctgcaag
      781 agagctgtaa aaaccccaag cctctgaagt ctcaagttaa ggccccgaac agttgagact
      841 ggtagcccta acttcagaat ttcccttccc cattctgcac tggggcttgt acctgtgcgc
      901 atcatcatca ccgagtagtg tccagacagc tgtaccccca aagtgagatg ttggacagga
      961 aaaccactac ccattcccca tacacacacc tccaaagcca aacaccacac
//
LOCUS       KCKM01003441             815 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54023apa ultra-conserved element locus
            uce-7969, sequence.
ACCESSION   KCKM01003441
VERSION     KCKM01003441.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 815)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 815)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..815
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54023apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>815
                     /note="ultra-conserved element locus uce-7969"
BASE COUNT          233 a          174 c          199 g          209 t
ORIGIN      
        1 cacccaggag gagataagga agggacagcg gttttgggga tgatgatgga tgaacgtgag
       61 gggaggaagc caggacagcc cccgattccc caccaagaaa gggaagggtc tcccaagtac
      121 tggtccagcc cagtgatgct gctggggatg ctggaagagc cttttcatct acactatctg
      181 aggaggaaga atattacgtg aggggtgctt aaagcattgt tcctaaaagt gcatcccaaa
      241 gtgctcacaa tacatcattt taagggcaat atttgctata cattaaggca gaaaaggtgc
      301 tcgcagcccc ctaaacctga cgggctgcat agctctaact gccataggat gtacaggaag
      361 attcaatgtg aaaagtggaa gataatgtgc tcacacacta atgggcactg aactagacac
      421 aggctcattt ttcacatcat gtcatctcta aggtttgaat aaaaagtaat ggctagaatg
      481 agcctggatc tatctcagac attatcattt gcctcctcag ttttatttgt gttgacttgt
      541 acagtctaaa aagatgacag tctccgggcc cccggatcag tctgagtgat aatacacagc
      601 acattacact gctggtgaca gcttctgttc tcctcgctgg catatgagcg cggcgcatct
      661 ccctccgtca tctcaaatgc tatcaactga cagaataaag aatcttgcgg aggggacatc
      721 acaaaccctg tctgttatga ttttatgaga taaactggag tttccagggt atcttgttcg
      781 ggaaattagt gtcagtcaaa ctttggagaa ttttt
//
LOCUS       KCKM01003442             873 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54038apa ultra-conserved element locus
            uce-4236, sequence.
ACCESSION   KCKM01003442
VERSION     KCKM01003442.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 873)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 873)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..873
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54038apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>873
                     /note="ultra-conserved element locus uce-4236"
BASE COUNT          206 a          181 c          192 g          294 t
ORIGIN      
        1 ctggtgaccg tagcgattat ttggtgtgat gtaaggatta gaattctttt gaagtgcatc
       61 atttgtatcg gagattgttg cttttggtgt cccgcctgtg gagtctggag aacttggaag
      121 ttcaagctcc agtgacgctt tctttctagt agctgggata atttttgctg ctacgggtgt
      181 aacaggttcc ttcagaggca ctttttggta gtgttttgtt ttgatcatat gaacactcaa
      241 gtcctgaaga gattcaaatg aatgaccaca gtacatgcac tttaatactt tctgcgcatc
      301 ttccttccct tccatttcaa gcaaagaacg cttacgaggt ttggaccatc tttttgggtt
      361 attgttatca gtttcatggt tgtcatctcg ataatgtccc gtttcattca tgtgcactgt
      421 taattctact aaagtatcat aagcagcact gcagtcttta cagcggaatt tactggctcc
      481 agtaaatata gagccataaa gcttactgct ttgtctgtac aattgaactg tgctaaaaag
      541 actcggttca ggaagaattc tgctctgaga aacctgctgc agtgttttag ccatagcagt
      601 ctggtgccag tcaaagctgc cgcttccaca actgctacta ctgctgctgc tactgctgct
      661 gctaccgttg tttttttctg aaatcggctg gtgaagattc aagttgagat tagaccagta
      721 agaattggag aggaagttat tatagacggc tttcatctgt tctaggctat cagacacagt
      781 agagtcttcc agtggtatcg aaacctcctt gctctcttcc tcgtttttaa tagagctgct
      841 ctcaaagtct gccatgcggt cacttgtctc act
//
LOCUS       KCKM01003443             472 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54054apa ultra-conserved element locus
            uce-869, sequence.
ACCESSION   KCKM01003443
VERSION     KCKM01003443.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 472)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 472)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54054apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>472
                     /note="ultra-conserved element locus uce-869"
BASE COUNT          146 a          105 c           99 g          122 t
ORIGIN      
        1 gttggagggg aacggggacg tgtttcagtt ctgatcgcag gagaagaact tctcaaaaga
       61 tcatcagccc cttccccctc cctctcttcg gcaaatatgg tataatttac agagcaactt
      121 aataatccga ggggcaccgc aaaagccctt tgcgttgtaa accgcttcta attacctgcc
      181 agagcaatta gctgactatc acgaagaaat tagatcgctc aatgtagcat aaataatgcg
      241 aataattttg taaggagaat ggaaagcgag acctggtgtt tctttataag gaaataacac
      301 ctcgtactgt acgaacccta catgaacaca tattaatgtc taggcatgca cggaaatgaa
      361 tccgaacatg aaccctctgg cttagattca gcactttctt catttacata tgcgaggtga
      421 aagtcggctt ccaggcgttt agatacagag ctcatccaga tcacagtaat ta
//
LOCUS       KCKM01003444             315 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54070apa ultra-conserved element locus
            uce-2839, sequence.
ACCESSION   KCKM01003444
VERSION     KCKM01003444.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 315)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 315)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54070apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>315
                     /note="ultra-conserved element locus uce-2839"
BASE COUNT          114 a           56 c           51 g           94 t
ORIGIN      
        1 gagagatatg actttccttg aatgatctgt ttaacctaag ccagaggaaa aaaaaagaag
       61 tcattaatta cttatgtgag ctattgcttc tgaaagacaa taaacctgcc tggtcgccat
      121 ggatatgaca tatttgctct gaaaacaaca caataattag caaaggggaa agatacaagg
      181 agaatatgca aactcctgag tttaaagcca tagtgtttcc ttttttcccc ctcctctttt
      241 tacttgtcag agtcgattct gtttgcaatt caaatcaaac aaatacagag aatatttacc
      301 aaaaaaattt taaat
//
LOCUS       KCKM01003445             683 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54086apa ultra-conserved element locus
            uce-1652, sequence.
ACCESSION   KCKM01003445
VERSION     KCKM01003445.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 683)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 683)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..683
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54086apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>683
                     /note="ultra-conserved element locus uce-1652"
BASE COUNT          226 a          112 c          132 g          213 t
ORIGIN      
        1 actctgttac ctgctttgca aactgcctcc aaaaatttat ccagggaaaa gaaatgaaag
       61 ccaacaatat aaataattga gttggagccc tgctgtattt aaaataagaa cttgttgctt
      121 ttggaaaagg ggaaaaaatt agcaccattt tgtaggacag tcgagttaaa tgaaggaggg
      181 tgattctttt atttctgctc tatagaatga tgtgcgctaa tcagcaggca atgccctgtc
      241 agtgagctaa ttcaactccc tgctaaaaga agtgtagatt aatggataaa ggaggtctgt
      301 ggtagggtca cactgatatg gattcaacgt gtacagcagc ttgtcagatg cctgcttgga
      361 ttaaatctaa cctttcttgt tgaaggttgc catttaccct attctttagt gcctcaattt
      421 attttcctcc cagaatttcc acataaaaaa atgatcatct atttgctttt cagagcaaat
      481 ttagagaacc aatttcatta tgtgtaagaa acctggaggc attaaataca gaaaaacaca
      541 gggaatattt aagggacatc gtacctgatt tattctaatt ctcaatgaga aggagactta
      601 attttacaaa gaaaaggcca gaattgttat gtaaaattat ttcagtttaa ggaaactttg
      661 aacaaaggtt ctacttcttt tag
//
LOCUS       KCKM01003446             487 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54101apa ultra-conserved element locus
            uce-292, sequence.
ACCESSION   KCKM01003446
VERSION     KCKM01003446.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 487)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 487)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54101apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>487
                     /note="ultra-conserved element locus uce-292"
BASE COUNT          168 a           65 c          119 g          135 t
ORIGIN      
        1 cattctttaa agtaaacatt aatatgcact ttcttagaaa gcgatataaa tatatatata
       61 aatacaggac gtgctaacct ctgttaacca tctgaatgtg atggaataat ctatctctac
      121 tgtgcaggta ggcttgtgca tggtggtgtg gcaatataat tttaaaagtt tgttacagat
      181 gtgatgggaa gctggaagga gtcgaataag cagaaaaaag agcttagatc tactgtaagc
      241 aatgagtcgg aatgagccgt taaaggttag aatttatctt tgtttctgat cattcaatga
      301 gaaaaatgac ttccacagaa atagatacct taacacggtt ttgggggaag ggtggcgagg
      361 gtgaaatagg attgaaagtc ctacaggtaa tagcaataac tggaagtgca gacgaaattg
      421 gtcttcagag caaagaggaa cgcagccgtt taaaaagtct aagtgcaatg ttgtggtgct
      481 gaaagaa
//
LOCUS       KCKM01003447             868 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54116apa ultra-conserved element locus
            uce-2878, sequence.
ACCESSION   KCKM01003447
VERSION     KCKM01003447.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 868)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 868)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..868
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54116apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>868
                     /note="ultra-conserved element locus uce-2878"
BASE COUNT          260 a          129 c          198 g          281 t
ORIGIN      
        1 tatatgcttc ggagtatgca gaggagggac attatgaagg caatgatccc gaactgacag
       61 aagaccagat agaatatggg gaagagcctg gagaagaaga tgaagtgcta gaccttgaaa
      121 ttaatgaacc cctagatgaa tttccagtga gtttctttct attgtatctt caaagataac
      181 attgcttcac gtgcataggg ttttagactg atttgaaatc tgtttacctc cctagggagg
      241 aggggaaatt agacctatta tcactgtctg ccagtttctt tatctaggct gtgacaaagt
      301 ttgtgttgac agcttgtttg ggggtaggta atgctccttt gtcatgctgg aaggcggttg
      361 agaatcatga ccttgaggat tgtatcctta aggaagaaaa cagctttgtg tggtggagat
      421 acactgccaa ttgttagaag tacttaatgc aaaagctttt atccaggctt tagacaagat
      481 ctgataaagt ccttcgaagg tgaaaagatt attgacctgc taaagacatc tttaaggtgc
      541 taatatccca aagtgattga tgtcctgctc gttcatcctt tttgtaactg agaactgtct
      601 aaacctgaat aaagagattg gaggttagtt cagaaaatgt catctgtgta attcaatgta
      661 atttaagcag tgtattagag aacatgcgct gtctttaatt gctagtgaaa taatttaatt
      721 gtaattaaaa ctatgtgatc agtgaggtgt tttgaaaaca agcaagcttg cttaagaaat
      781 attttgctcc cattttatgt ttgtaattgt tcagaattga ccctgcttat ataagtgctt
      841 gcagaatgtt ttaagaacat ttttggtg
//
LOCUS       KCKM01003448             827 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54132apa ultra-conserved element locus
            uce-5590, sequence.
ACCESSION   KCKM01003448
VERSION     KCKM01003448.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 827)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 827)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..827
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54132apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>827
                     /note="ultra-conserved element locus uce-5590"
BASE COUNT          251 a          203 c          171 g          202 t
ORIGIN      
        1 aagaagaaat ggagaccaag tacatatttc taaaaagaaa aatcaccaac tgcttcagtt
       61 ttaaaataca agccctcaga ggcaccattt tcgcaggcta aaatcatttg caaagcccaa
      121 tgaaatcaaa atcaagtcag attccagctg tatcagcccc gtgccttctg ccaggaatgt
      181 tcctcccgga ttaatgacaa caaaccaccc tcttgactga acatccacac gaccggggaa
      241 tccaccgacg aaacaatgtt atacctcgca ccgtgggttt gcacttaatt ttaactctgc
      301 aaaccaagct ggcctaaaat tgttccatcc tggaaggctc ctcgagttgt tgggtttttt
      361 taacccaaat gcacttggtt tccattgctt tggcgtgtga gtgtggtatg agaggggagg
      421 gcgggtggcg gagccttact gtacttctcc tccttgcatc tctgcaggat ctctaagctc
      481 ctctgatgaa ctgggtgatg gagaaagcta aaactatcca cacttttcaa aaccgcacat
      541 ggcactgcat catcatgccc tttgggaagt aaaataaaaa caataaacaa aaaaaacaga
      601 gagaagagag agtttataag caggtctcag gagagggtaa aagaaccagc ccgaaggaca
      661 tgagagctca agggtcgcac atttttttcg cactcgacac aatttaactt cggtttcctc
      721 tagactcagt gtcctggcgc gggagcggtg ggatggacca tattccaacc ccacttacaa
      781 tcctcattag ccagaaccta atcactttat aaccactccc agattat
//
LOCUS       KCKM01003449            1061 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54148apa ultra-conserved element locus
            uce-2950, sequence.
ACCESSION   KCKM01003449
VERSION     KCKM01003449.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1061)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1061)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1061
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54148apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1061
                     /note="ultra-conserved element locus uce-2950"
BASE COUNT          349 a          188 c          185 g          339 t
ORIGIN      
        1 ctagaatcaa ggcttgaata gcagtttaat ttatagcagt tttctagctg atggtatttt
       61 tgctctcagg taaggtcatc tcaatatata tccctttaga gaaagccaac ataagaatct
      121 tttttatttt caagtagcca actattcagc tgctaaaatg taagtcacat acagaatgta
      181 tgcacgtttg attctatgct ttttttttaa agggaagatc ctttatgtgt ataaaaaaga
      241 gaaaactgaa agaaaaaaaa tgtgaataat tagatcagag atagatgcca ccttttctca
      301 gtgttgaaac tgtgagggga aaaaaagtgc taccatataa ttgacataat tgatctattt
      361 ttttcccttt tttgctgcag taatttttta tgcatgccat tgttgctgtt attatccaag
      421 atgtgatctt gtgtggttga taatactgac tagatatgaa tactggtaag taccagccaa
      481 tcacaaatct atagtgtcta tttctgcatc accaggtgct atctcatggg aaatatcctc
      541 ttttttggca ggcacacagc gctctgcatt atctgtcatt ttcattagat tcaagctaca
      601 gctgagccaa aaagacttag ttctagcata tgtgctcaaa atggccaaga tgagattgtc
      661 caaattcacc ctttcaggat tgtattgtaa aacaactgga gctaaagcta aaaattagag
      721 ctagcaaagt atatgaatta catttgggaa actgcaaaca ccataagctc agaagatttc
      781 cagcttatca cagtcatcac ctccaaaagc tccaaggagc ctaagtcagc aatttctgtt
      841 tttcaacact tcatttgtac agtctaaatg tgatgatgtc aacaaagaag aacaaggaca
      901 tcacaagaag acgaaatcct tctgttttcc agtggctcag aaaaccacag caagacacca
      961 ctgattacat gcaaatgcca tatttaacag gtcaatgtta ttatattctg agtcagcact
     1021 aatatattag ttgggactgt tgtttattaa taattctgta g
//
LOCUS       KCKM01003450            1137 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54164apa ultra-conserved element locus
            uce-464, sequence.
ACCESSION   KCKM01003450
VERSION     KCKM01003450.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1137)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1137)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1137
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54164apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1137
                     /note="ultra-conserved element locus uce-464"
BASE COUNT          362 a          236 c          209 g          330 t
ORIGIN      
        1 acctgtcttg aaggttgctt gctatagcta aaacacaaac tacagaacaa atacacggta
       61 aatacctatt caacttagaa atccattgtc attttttgta catcttgcgt ggcaccacat
      121 taaacgaagg aatgcctgat atctaacccc tgatttggag agctcactta cactgcgggg
      181 ccatgtaatt aagctgacaa cccacaattt cgcacacagc agacagaagc ccaagactga
      241 aagaacatga acagcgaatt acttttaaag aaagaaacag gtttttttaa atgcaatctt
      301 gaatactgtt attaaaaaaa tgagagcaac attttggagt aatgagcaca gattactcat
      361 tcccttgttt tacacaagtt gacttttggc tttctgcaga acatcattta acagagcaca
      421 ttaccaagct gctagctgct tttcacagtg atgttaaagc aggtaagaga caataagtgg
      481 aactgttgat ggtttatatt actctattat gttaatgttc actaaagtat gccataagct
      541 ctctcattac atgtgtataa accaattctc tgtggtgtta ttcctgtgct aaatgctata
      601 actacataaa tcttgaatta atggagactt tatagttcct gaaaatgaag ggtaattgct
      661 atctgttaat gctgttgttg ctattaaagg aagtatatat tttcagtaac aatgtttatg
      721 gaccgtgagc ctcacatcac agctactgca cggtgcagag atagtgtaat acgaccatca
      781 gactaactcc ctttctctcc ttccttcctc acaaaaagca cagtatcact gccacagctt
      841 cgacaaacta ccctgcaatt ctcctaacag ctgcagagtc caaaccaatg tccttcaacg
      901 agtatacaga aaaagaaaca agatttgcat ttccatctct gggaacgcat gatttgctaa
      961 gtttctcgct tggttaaatg gctggacagc tcactttatt agtttgggta tctcaaaccg
     1021 ttcttggaga agcatatggt gacagaatga taggtgtgag aaagcatcat cccacttact
     1081 tcctccgaga tttcagcagc gatgcagaag tgaaaggcta cacttggcca gagacag
//
LOCUS       KCKM01003451             642 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54180apa ultra-conserved element locus
            uce-7539, sequence.
ACCESSION   KCKM01003451
VERSION     KCKM01003451.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 642)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 642)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54180apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>642
                     /note="ultra-conserved element locus uce-7539"
BASE COUNT          135 a          160 c          156 g          191 t
ORIGIN      
        1 gctggctgcc accgtggtgc caagtacctg gatggcattg gtggctttcg cctctcgtcc
       61 tagccaccac gtttctcccc tctgcaaaag gagaaaaaaa aattattcag tgacctgctg
      121 gggctgccaa gggaaagttg aaggtctccc attaattcca gactaaaaat gacaaattca
      181 tcttctacga caattaaatg aagtcagtaa ttgatgctaa ttgatcttca gccgagaggg
      241 ctcttactgc tttgccgtgc tcttgcggat gctccggcgc ttttctccct tccccgctcc
      301 tccctgcagt cccctggccc tggagacatc ctcagggccc cgatggctgc tcccaagcct
      361 gtccagcccc gtccatcgct tttggccgct cgttttttgg agtttgcttt tattttcttt
      421 ttttttattt tggaggcagg tacgaggcct ggctgtgtta gcgacaaagg atttatagcc
      481 tacagctgtg taggtttcca cttaattttt ataagcccag cataagagcc agcagggggt
      541 aaagcacact tggattttct ctacttaaaa tattacaatg ttagcacttt tgcttgagcc
      601 ttgaaaaggg ggcagtgggg gggctggatg catgtgtgtg tt
//
LOCUS       KCKM01003452             543 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54196apa ultra-conserved element locus
            uce-904, sequence.
ACCESSION   KCKM01003452
VERSION     KCKM01003452.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 543)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 543)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54196apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>543
                     /note="ultra-conserved element locus uce-904"
BASE COUNT          173 a           82 c          121 g          167 t
ORIGIN      
        1 tgtaataata aagttaaatg taactgtttt aaagtataat tctttggaga gctcagtttt
       61 atgttgggcc ggcatttgaa gtagcactag tcattattaa cgggaagcac agatagagga
      121 gatttaaatc actaaagtaa taaaatctga acgagggcta gcaccttgaa aggctcttgg
      181 agagaagatt gcatacaaat gcaattaaaa cgatgcttat aaaatactaa gatgttaatt
      241 gggtttagtc ccagaagccc cagcagtaca gtatgtcaga agttagctgg tttgaagttt
      301 aaaaagagtg gtttaatttg tacaccttgt cctaattacg aagctttctg cagcctgtgt
      361 atcggcatgg tttattgtag cttagagctt tgtaaaacaa acacacacca gttaattggg
      421 ttattgcaat ggaaaattgg gctgcagaac tgaaaccttc cttgctagtg tttttttaca
      481 gcttgtaatg aacgctccgg caatgtcagg atagactgat ttgtaaggtg tgcagtttac
      541 aac
//
LOCUS       KCKM01003453             732 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54212apa ultra-conserved element locus
            uce-2680, sequence.
ACCESSION   KCKM01003453
VERSION     KCKM01003453.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 732)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 732)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54212apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>732
                     /note="ultra-conserved element locus uce-2680"
BASE COUNT          191 a          118 c          162 g          261 t
ORIGIN      
        1 gcagatttta acccattttt agatgcttcc ctctgatgca ttataatatg gctacttgtg
       61 agacaaggca gtgaagattt ttttttcctg tgttctttgt tttttctttt ccaaagttaa
      121 ggacttaaga aaagtctgtt cagtcagctg atacattgtt tgaatgtatg tatgcgtctt
      181 gcctgcttat ttgatctttt ctgcccccta cttgaagctg tggtttgttt atttaaggag
      241 gggtgttggt ttggggggca cagtatgttt ggggtttggt ttggttttgc tttgttctgt
      301 ggttttttta acaatggcag tgaaagtttt actgacagcg attatgacta ctaagcaatt
      361 cagtttattg gaagacgaat tctactggat catatcggac ttttcctagt ccctgagacc
      421 ctaacttgtg aggtttttta gcaacaatca caagtcaggc tcttgggacc taggcggagg
      481 ggaaccagca gctttggact gtgattgttt ctctgcagaa tttagagaac caaaggagct
      541 ttccttgtct cgaagggaaa aaaagaaaat atacctattt ccaatgttaa gcagcagaac
      601 tgtttctaaa agaaaactgt tagccgttgt gcaacattag gatgttacat ttttgtatat
      661 ttagaaaact ggactagatg ccatgtaaca tttagaatta aaatttaacc tgagagtttg
      721 cacttccaga aa
//
LOCUS       KCKM01003454            1042 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54228apa ultra-conserved element locus
            uce-496, sequence.
ACCESSION   KCKM01003454
VERSION     KCKM01003454.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1042)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1042)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1042
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54228apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1042
                     /note="ultra-conserved element locus uce-496"
BASE COUNT          309 a          219 c          200 g          314 t
ORIGIN      
        1 caacaccaag ttggacgtaa agtgcgcttc gccccgcagc ctttgcggtg aaaagttccg
       61 tgcgttaaat acgagccgct ggcagccgaa ccctgttaca tctgtaacac gccgtttggt
      121 ttatattcaa atcaatgatt ggcacataaa gctctaacaa atttatttat ctcctacctc
      181 ctttctaaat aattgcacgg aaaggccgcg gctgttgttt tcccgccctc tcccgcgcgg
      241 ggtgcacgca ccatttctcc ggcagtaact tgttactgag gctcccgcaa gccccttatt
      301 ttccataaag ccgagtgttt ttaaaaggaa tatagctgga tgataaaaga acactaaaga
      361 ttttactttt aataagaaca gtgtgtcctt aaaacggcat atttagctag cagaatgtta
      421 actgcaaggt aagagtgttg ttttataccc tcagtaacca gaccaattat ctgcgaagtt
      481 ttttcatatt taatgtatcc ccagtctcct ttcaccatct gcccttcccc ctctaacatt
      541 gtggaatttt tatgagatag gacaaaaatg ggcatttccc ttattaccat ctcactgtgg
      601 aaatcaaata tgcaaggaaa gtagtgtata tactaattag tgctgaattc ataattactg
      661 tgctcattga tggagataca tttgaataca ttcaactcct ctgggagtgg agcaggctgt
      721 ccagaatagt ttgaaaaaat gccctcagcc tcttttcttc ttgaaattag ggatctgtgg
      781 catacagtaa tgttataaga agaagatcca aagtgcccgc aatttcttta aatataatta
      841 atcaagtgaa gcatgtaacc taatgaatgt atttgatata agctactgtt caaatatggg
      901 ctttatctct gtctgtgttg gaattactaa aaggagagga cagaggatca ggcattcctg
      961 tttaaaatgt tactcaatgg ttctcactgc atgtcaacag tacgcgagct tgtcaaatta
     1021 aaaactgaca gaaagccaca at
//
LOCUS       KCKM01003455             797 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54243apa ultra-conserved element locus
            uce-4067, sequence.
ACCESSION   KCKM01003455
VERSION     KCKM01003455.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 797)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 797)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..797
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54243apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>797
                     /note="ultra-conserved element locus uce-4067"
BASE COUNT          269 a          143 c          143 g          242 t
ORIGIN      
        1 tgatgacaca taatagtgat tagaaagtgt ctcagctggt agtaagttcc cttcataatt
       61 ttttttcaaa tgttgttttt atgcagttca tacaggaatt caattagcat atcattgtga
      121 ctgattaaat atgcctcacg taaatttaca tgtcaaaata catactgtac ttaaacaaac
      181 aggcaagaat gccagtcttc tgtaaacagc tttgcatgca taagctaagt cagaaacaca
      241 aaagcttata tttaaattct caatgactac ctgaataaag atagagtgaa agggagacag
      301 aaaggtaatg ttactcatgc atgaagtgag agaatgaata tagacatttg tctctctttg
      361 tctctgaaga aaactattga caagagattc cccatctgca tacgaggctg tcacgtcaga
      421 ttagctcatc aggtaatgga aatttggcct ctgatccaga aaatgtccct atgcactaag
      481 aatcgagact gtttcaaaga gattgtatta tcgtagacag caggattaaa ttaatatggg
      541 aatgacttct actggaggaa attttttgtt aaacatgtgc taatgtttat tatgcagagc
      601 atcctcttct cataagtgat ctttcttgac atttattcat tacttttcga ccttctttgc
      661 tactgaaaaa caagcaagca gagcacacct cacgtgaagc acggatgata tggttccaac
      721 caaaacctct acagatgcat tcatgctggc atgcattaca aaacagtaaa agaaattaca
      781 ctggtttccg atagatc
//
LOCUS       KCKM01003456             979 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54259apa ultra-conserved element locus
            uce-5005, sequence.
ACCESSION   KCKM01003456
VERSION     KCKM01003456.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 979)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 979)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..979
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54259apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>979
                     /note="ultra-conserved element locus uce-5005"
BASE COUNT          322 a          189 c          170 g          298 t
ORIGIN      
        1 taaatacgtg tggcagacac atgctgggct gaacctaacc tcccacaaag agtttgggat
       61 attttattat gttagagcta tgtctgagag cacagggaat tgaattacct tttggaatca
      121 gcagcaataa ttaatataaa ttcactttag ccttaaacac attagtagtc tctaaaaatc
      181 cctgctctct tgaagtatcc ttttgtttgc ttttttttga ttgtcttatc agaaaaacca
      241 agtccctccc ctgtataaag aggaatgaag tgtatgctat agcccaagac atgtcttcac
      301 tctgttggtt ttgtaaataa agccgatgat taccactgct attccatggc aaccatagaa
      361 agggaaaaca ggaaatataa tgcagaaagc ctgcttcagt gaaaaatact gtaaattgaa
      421 tttgacagca tttgatggca tttgattatt ctagtcacag ccaaacaatg atataaagag
      481 taatatgaaa cagaatgtgt tactgcctag cagactcaaa agcaataaac cttcctccaa
      541 tgtgacacaa tcacttcaca atcataattg tagcctgttt gatacctctg agtacagcag
      601 aagggcactg actgacatag atacattttg ttttttattt aaagtgaaat gaaaatggcg
      661 cactggggct ccagatacaa tcgttatatt cacctacata ggcatgaatc acttggcagt
      721 tatttcagct gaagtttaaa tgtgcttaga caacaacaat atcaaatctt tctcagatag
      781 ctgcaaaaaa atcagaaacg ggatgtaagc acatagttct ttttcatttt gtagccacac
      841 ataaccttac attgttatag cagcaagact gcagtatttc taggggaggt tatggcatgt
      901 aatttcttct tcatcatgtg cctcttcctt actgcatcac caccaaaata aattcattta
      961 actcaaaacc tggaatgct
//
LOCUS       KCKM01003457             330 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54274apa ultra-conserved element locus
            uce-3167, sequence.
ACCESSION   KCKM01003457
VERSION     KCKM01003457.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 330)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 330)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54274apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>330
                     /note="ultra-conserved element locus uce-3167"
BASE COUNT           87 a           77 c           80 g           86 t
ORIGIN      
        1 cccgccccat cccctgcctg taaaatcgaa gttggacaaa cactgcacgg ctgaagtgac
       61 atatttgaat ggaattcaga ccaaccagtt cctgtttatg tttctgattt gagaatggag
      121 ccctctcatt cactatacat tagaaacaca ccaaggccat aaatggtgtc aggttgcagg
      181 caggcagggc caaggagcat taatcatgac tttaaggcaa ctggcaaaag cagcagctga
      241 gggaacacta cacccttcag ctccgcataa atggacattc cagggtttgg cgtgtgtggg
      301 ttgggtgttt ttagctggct gctttctttt
//
LOCUS       KCKM01003458             594 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54290apa ultra-conserved element locus
            uce-4559, sequence.
ACCESSION   KCKM01003458
VERSION     KCKM01003458.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 594)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 594)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54290apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>594
                     /note="ultra-conserved element locus uce-4559"
BASE COUNT          160 a          139 c          115 g          180 t
ORIGIN      
        1 ccattttttt tttatattta aaaggcgtaa atttacataa atcagtggct aaagcatgct
       61 aacactaaag ggtaggagtt cagcctggca gatttgcatg cagcatcctc agacgaaggc
      121 aggcgctttc catttccatc gagagccttg ctgcgctgga actctaatgg gcttagaaca
      181 gtaaattttg aagaaactga ttgctgcccc cgtagctagt aaatgcctgc ctggacccag
      241 tggcatttga aaaaagtgtt ttatcataaa attatcccag cagagtccat tctgcaagat
      301 aacatcatca tcatcatcat catcagtact ccatgcagga cccaacagct ctggcacaat
      361 attgccagtc atttatctgt tgtcagcaca ggttacacac tgtaatcctt gactgcctcg
      421 gaattagaat gtctttgatg tccccacaag agttttttgc ccgaaggctt taccaatgct
      481 cggcagctca gtgtttattc ctcgtaatct tcctctcatc tccaggctag cagtgacaga
      541 tggttatggg cacacaatag tattaagagt ttgatatttt tttttcccct cctt
//
LOCUS       KCKM01003459             440 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54305apa ultra-conserved element locus
            uce-4537, sequence.
ACCESSION   KCKM01003459
VERSION     KCKM01003459.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 440)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 440)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54305apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>440
                     /note="ultra-conserved element locus uce-4537"
BASE COUNT          133 a           91 c           79 g          137 t
ORIGIN      
        1 caatacgctg ctagacacat ttcctggagg gaaatggaca cctacctaca cacaaagcta
       61 tacagctaat ttataccttg tcgaatttat aacctcgtct atgcttctat ggacactttg
      121 tatgggctgc agctcaaatc ctaaaatagt caagaatttt ttcctttccc atatagtatt
      181 ctatttactt tgacttaaaa caaaaaaagc gtataaatgc aataatgcag gtagactaga
      241 aatactagat tgaaaattaa agtagtttag cttgtcccat tgtgactgac agtgttgtac
      301 gacacccaac gctgtaccct aacattttcc aggctttcta cgtagctgaa tctagtatta
      361 gctttgaaaa cccattgtat gagtggtggg tggatgggtc ggaaacgtgt gctctctaca
      421 cactgtatgt tactcacttc
//
LOCUS       KCKM01003460             913 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54320apa ultra-conserved element locus
            uce-3441, sequence.
ACCESSION   KCKM01003460
VERSION     KCKM01003460.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 913)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 913)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..913
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54320apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>913
                     /note="ultra-conserved element locus uce-3441"
BASE COUNT          307 a          190 c          179 g          237 t
ORIGIN      
        1 agaatgaaat cctctgcaag acgatgtgtg ttctgaagta aaagtggtca caacgattaa
       61 gctttggaga aagataaacg tattcctgat ccagaaacag ctgtttctac caacattagc
      121 agtagaaaaa atggccttat atccacctcc accatttaga gctcaagtgg ccagtaaaca
      181 gagtaacagc atcgtgaact gcagcctacc tgaatattat tgggtgccta cagcagcagc
      241 ctaagaaaaa cttgtttgga agacttaaga cagagatgta atacaaaaat gtagacaagc
      301 tgatacttca gtattgtgaa cacctagtta aaaaagtttt tttccccctc ttgaaatacc
      361 ccaatcagta cttttggtac acatacctcg aagaattctc tcctcatggc aacgtagaaa
      421 gtcccagatt ctaacagtgc cgtcgtcaga gcatgtagca aatttattat ccgtgggtga
      481 gaaactgtta catgaagaca cacagcaggg gaaagaagtc agcatttaac agattatcta
      541 tgcttctcag acagggcaaa attatactgt aatgtgttat acactgaagg atgcatttga
      601 acatagggac ttttaagtga atacagtgcc tgccaaatga cacttcactg caagacatga
      661 atttagcata gggttactat tgcattgcag tcctctgtca aacaaggaaa aaaatccaga
      721 atttattctt agcaccttcc tacctacgac tgcacacggt agcgccttct ctacaggatg
      781 agaagcaaca tcaatacgat ttggtaactg tcaccctaga ttttcatgtt tggtaatacc
      841 ataagaaagt gacactgtgt agaagcacag gagaacagtt cttaggaaaa aactcctctt
      901 cagccacagg tgc
//
LOCUS       KCKM01003461             902 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54335apa ultra-conserved element locus
            uce-3905, sequence.
ACCESSION   KCKM01003461
VERSION     KCKM01003461.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 902)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 902)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..902
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54335apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>902
                     /note="ultra-conserved element locus uce-3905"
BASE COUNT          304 a          153 c          156 g          289 t
ORIGIN      
        1 atcatgcttt gaaatgccta actcttaaca gctaccttta tataataatg acatactagt
       61 aaatgtgcac aggagagaaa ataagctaag agaaaataaa cttgtgtgta gggtccttgc
      121 tttagtagct ctcggagata cttttcctgt tttctcatac gctgcaacat tggtttcatc
      181 caactcattg tacattagga acaatttagt atcatttcat ttcaaatatg caagctttat
      241 atcgagagta aatgtgtagc cacaaggtaa aattaaaaaa atatattagt ctcatcatta
      301 aaaaaagcct ttaaagtttc cattatccat tatgtcaggt agcaaatatc ttctcaatgt
      361 aactctagac attaaatctg tcaagaggca tgcagtaaaa taaatgtctg ggataccttc
      421 ataaacaaaa atcttatttc cataattcat acagctggct ggcatttatt ggcacgtcag
      481 gtgcaatggg gacatttcag gaacattaac atgtacagca tcatttgtca acaaagcaac
      541 aatgtaagca aatcgttcag aactcataca gatttacagc tttctctgcc agctgctaat
      601 tacggtgtgc tctgcctatt tggtatggtc ttttttattg gaaaatgaca aaggggttat
      661 gatatcccag tttggaatat agatgcgctt ttagtaataa tatgagtggt aatatgccta
      721 cacagcctgg agttttgatc tagttgcact agttttgtaa ttgaccagtt ttgattgatg
      781 aaggacaaag agaaattcac agtgttattt acttacagac agaagtaacg tccgcaaaca
      841 aagaaataat aaaataccag agagcaaaaa gaagtctctt tgctttaata tctttttttc
      901 ct
//
LOCUS       KCKM01003462            1087 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54350apa ultra-conserved element locus
            uce-4355, sequence.
ACCESSION   KCKM01003462
VERSION     KCKM01003462.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1087)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1087)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1087
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54350apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1087
                     /note="ultra-conserved element locus uce-4355"
BASE COUNT          310 a          202 c          216 g          359 t
ORIGIN      
        1 gctagcttga ttttaaaaaa atctttaaaa tctgctgcaa atttaaatga ttcccaaaat
       61 gaggaattct gtagttctgt gaaaattttt cttcagagta ctaatatttt gatgcatgtg
      121 tttcacctta ttttgattaa atcttttcca gttttgcaaa cactataccg caacatgaaa
      181 aataagattt tatctgtaaa cacaaagccc ttcatctaat atttgttgct gttgccaatt
      241 tttcaatgaa atgacctaaa acccataaca tatacagtag ttgcattatg gggagggggg
      301 tgctatctgt tctcgctttg taacgggggt aatgcttgca gctttagaag tgggttggtg
      361 ctctaaggag cacaagtttg ggatattttt aaatgaactg aagagaaatt attagctaat
      421 agactggcag cacgctgtaa aattattact gtattgtgta ctggctataa gatgtagaat
      481 ctttcagtaa gccaatcatc tgtaatcatc ctagcagtgt aatattaggt tgttaaggct
      541 gctgtgtttt aaagggcatt tttatttggg ttttggtgaa atactttaat ttgttgatta
      601 tattcatatg gaaacagcat tcattgataa tagctctaat tacatatgta tgaaaacaac
      661 aaacactgga tgatctagtt gattatttaa gcataaaata aattgtgtta aaactcttgg
      721 ataacgtgta tttggaagtg ttcttgtacc ctatggacat acggctttgc agggccagct
      781 gttcatcact cctggctttt tggttttttt cctctcactt tcttttttct gatccacctc
      841 ctcttcccag tgtgacagac catttctgtc cccaggtcgg gggaacagga ggaaaacacc
      901 acagccagca catcctcaag cagagctaag gaaacccatc tccctgggag gcaggagact
      961 cctcgggctt ggggaaagca cgtgtgcgac atgggtgtgt gcagcgtctt ctccaacact
     1021 tgctaactct gaacctcctt ttatttcttt tgccccactg agaactagga aaagcactac
     1081 caaaagc
//
LOCUS       KCKM01003463             484 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54366apa ultra-conserved element locus
            uce-36, sequence.
ACCESSION   KCKM01003463
VERSION     KCKM01003463.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 484)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 484)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54366apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>484
                     /note="ultra-conserved element locus uce-36"
BASE COUNT          158 a           86 c           91 g          149 t
ORIGIN      
        1 cttcataatt tgcagaaggc tgcaaatgtc agtcctgatg tactgcccct tgaaattagt
       61 caatagagca aacagcaaga attgctgtgg gcagaaaata agcactgtaa tcatgacata
      121 actggggtca gtgatttatg gatttcaata tagtagtagc tgcatatgat tgaaaattta
      181 ctaggtcact agtgcaccaa aaattttatt cgcagcctct gggcatcttt tgaaatgtgc
      241 aacaaaataa aaacctctga acctgttttg acactgtgta ggctcagtgg atgacacgcc
      301 aacccagtga gtctcattta aatgcaaatg tgtcacaaac ttcagcacca aatccttttt
      361 aaatgtataa aattcctaga agaacattct aggcaggatt gatgtccaca gtcaaacttt
      421 aaagaagatt atgaaaataa tatttttctg ttttgttttt tttttagctg gaagctgaag
      481 ctct
//
LOCUS       KCKM01003464             634 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54381apa ultra-conserved element locus
            uce-4967, sequence.
ACCESSION   KCKM01003464
VERSION     KCKM01003464.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 634)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 634)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54381apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>634
                     /note="ultra-conserved element locus uce-4967"
BASE COUNT          207 a          141 c          101 g          185 t
ORIGIN      
        1 actatcagtg atttgtggaa tatagttcag ttctccatag atctactact gctattctag
       61 ctgaacatgc gtgatagagt tattcacttt tttctaccat gcactaacag tatggatagc
      121 attccagggg caaaaacatt ttacacaagt ttccatgctg aaattgcagt acagaaaaat
      181 tcattctcta atcatatcac accaatttta ctattacaca ttgaaacaca ctcatacata
      241 atcatacctt cctcctactg cgtcgtcttg tggctgggcc ccagcagtgt tcctctgtga
      301 acgtcgcagt gacccccctg gattgttatt aggccggttg gacattggca cctctctcct
      361 gaagggacat accctttcta gacactatca ttcactgaaa gacaaaagag atatagtcat
      421 aatacatgtg gcacaaaaat tcacagccat gcctcaagag gcaaatgcaa aatgctattg
      481 tttaagtaga aacttaagac aaaaaacttt aaataatttt tagttgaaag acacacagac
      541 caagattctt ctcaagagca tttagatcct taacacagag caatctggtt tcagtatata
      601 caacatactg atgacctatt caaataaatg acct
//
LOCUS       KCKM01003465             646 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54395apa ultra-conserved element locus
            uce-6644, sequence.
ACCESSION   KCKM01003465
VERSION     KCKM01003465.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 646)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 646)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..646
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54395apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>646
                     /note="ultra-conserved element locus uce-6644"
BASE COUNT          182 a          142 c          127 g          195 t
ORIGIN      
        1 cagatttctg atctgtagct cctgtcccta tccccgattt atgattctct ttgcccatct
       61 ataaaatagg aacagcatta ttttacagag tggggggttg tgaaccttaa tttgttaaca
      121 tttccaaaag aattgtgaga ttctgagatg aaggggccaa atttaatgct cattgtttag
      181 gctttagctt gtctgtgctc agacagaact cccactgaga ctgggagcta aacaacaatt
      241 ccagaagttg gtccattttt ccttggaaaa tgagacagtt gcatagtaca gtttgtttgc
      301 gacgctcatt cagtaccctg gagatacagc attatggtta gttacacatc tcagaaagct
      361 tcttcagcaa tattgcaatg gctttgaatt cttacaaggc catgcagtcc aagtaaaaca
      421 aagctgctgg caaaagtaat aagccagcac tctacacctg attaaacagt attgtttttt
      481 agtctagagc cacgccaagt tctcatgtcc atgtggatgc ccagtatccg aaaatcacac
      541 agactgcagg ttttaccact gcagcagcgc acaacttgct ttgcgagaag gtacgcctag
      601 ttttttttta actcagcaat tttcaggaat caacctcctt tgccca
//
LOCUS       KCKM01003466             426 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54410apa ultra-conserved element locus
            uce-5910, sequence.
ACCESSION   KCKM01003466
VERSION     KCKM01003466.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 426)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 426)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54410apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>426
                     /note="ultra-conserved element locus uce-5910"
BASE COUNT          128 a           83 c           62 g          153 t
ORIGIN      
        1 attatagcag aaatcatctg ttatattctt gcataaagca aaactaggtt tgtaagccct
       61 tgcccttaat ctttctttca attttcttcc atttaaaaac aatctttccc caatactcta
      121 attaatgcaa atgatattca tgattagtta gtattatgct aatctgagcc ccaaatttac
      181 ctaaatctac atggtgttgt ctgagtacca gattgctttg ggtttctaag taatattaca
      241 ttagcctgcc agctgtacaa aacaccatga tagagtagaa atccaagcaa atcatcaaga
      301 ttacattagt tttgtttctt aatgaacaac tgtttgcatt agggattaca gacaaattat
      361 ggttttcctc tctgtaccca ggcagccagg catctgttga gaagtttcct tttttttcct
      421 gactat
//
LOCUS       KCKM01003467             693 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54425apa ultra-conserved element locus
            uce-5882, sequence.
ACCESSION   KCKM01003467
VERSION     KCKM01003467.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 693)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 693)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54425apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>693
                     /note="ultra-conserved element locus uce-5882"
BASE COUNT          181 a          138 c          164 g          210 t
ORIGIN      
        1 ggggagcgga gggcagggag gggggcggca gcgcccgcgc ccccgcctcg cctctgccgg
       61 gtcagccccg cgatgggttt gcgatattac tctgctggcg agggcactgc cgtacagttc
      121 cgacgccgca ggtttctaat ctgcttattt ataattcaaa agcttgccca tatattaatg
      181 aacccttaat gagctgttga aaatgcctga attacagtca gattattaaa ctccaacggc
      241 ccctgtaatc ataccatttg agtgggcttt aggtactttt catatctgca gctttgtatt
      301 gtgaaggaga tgggtttatt cgaagaaagc tttgtaataa ttttgacctg caatttattt
      361 attggcctct gaatgcagta gtctatgcag atgctcttgt ctattatgtg tgggggcagg
      421 tgcacagcgt gttgaaagac agctaattag gatttgctga aagatatgct aaaactgtgg
      481 tcttataaca aagccaagtt cattgttaaa caatgtttta gtgtctgttt atgtgatttg
      541 tctaaatcat cgagatactg aaatgaacgt tgtagttata agcagattaa aatcagtcgc
      601 acacatgctt tttattaact tataatgctc tattgtcacc gaggatgccg gattttaaat
      661 accgtgcaga cccaaatgcc cataagccat tag
//
LOCUS       KCKM01003468             881 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54440apa ultra-conserved element locus
            uce-4828, sequence.
ACCESSION   KCKM01003468
VERSION     KCKM01003468.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 881)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 881)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..881
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54440apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>881
                     /note="ultra-conserved element locus uce-4828"
BASE COUNT          291 a          214 c          154 g          222 t
ORIGIN      
        1 caaatacctg cctattgcaa tacggcattt agtactttac tcagaagcat attccagaaa
       61 cacctgtatt cttgatctaa ttccctgcaa caaactccct aaactgacca ggaaggaggt
      121 ttggacaatt aaaacaaaca ttctgtgcat ttataaaacg gaacagaaac aaaagtatct
      181 tatcctaccg gagtgcaaac ttacccatta atgaggaaga aaaaggctta gagctgtaca
      241 gtaattccca accaactgca gaaaagttga gagtttgaaa acactttttg actatccagc
      301 ctttctgtgc ttcaacactg gctgcagtgt aaggaaggac tgaaggtatg tggtctaaac
      361 acaacaaaag ccactgcctt actgtagatt aaatatgcag gaagaggccc ctttgcataa
      421 acacaaacac tcagcaaatg agtaactggc tcaaatcaga cgcctgctgt gcattctacc
      481 tgtcctgatc tctgacaagc tacacagctt gtttaagggt gtaggagcca caaaaccaaa
      541 tcaaatcgcc gcgttcaacg ctttgctcat gcgatagtaa ataacaacag caccaacaac
      601 tccacgccaa acgctcgctt ctaatctaag cattgctctg gcaaagagct gaatcgtgtg
      661 ctgtgcccgc tttggctcag ccgcccagag cagaagaaac acaaccaaac accacctgta
      721 aaattcactt gcattaactg tactgaaatc caatacattc ctggcccagt cttttcttaa
      781 cgagaattta aaattaatac agagacttct ggttgacaga ttaaatctga atttcctcat
      841 gctgtccctg ttttgtttac tacataaaag acattccaca c
//
LOCUS       KCKM01003469             714 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54456apa ultra-conserved element locus
            uce-4676, sequence.
ACCESSION   KCKM01003469
VERSION     KCKM01003469.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 714)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 714)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..714
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54456apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>714
                     /note="ultra-conserved element locus uce-4676"
BASE COUNT          192 a          149 c          145 g          228 t
ORIGIN      
        1 cactgtaata caaggtcttt tcttctgttg cttgccacag gtgtaatgcc ttgttatttt
       61 cagttccttt tgcttccaga atgagctctg atggagctcc ctaatgataa caaaccatca
      121 ctgcagtaat attgatacct gttgtaatca ctggcattct ggcttttcaa ttttcactat
      181 ttgccttgga tcaagtagct ctgtgctaat gcaacagaag gtcaccagat gaaggggttg
      241 ataacagaga gggactgttc tacttaacat gcatggagga ttatgctttt cagtcgtcct
      301 caagctaatc tttcaagttg tccttttttg actttctcag tttaatcagt ttaatctcat
      361 cttccctctt ttctgattac aaggattttc tgtagaaacc ttgcctccac aataaggacc
      421 acgtggtaat ttattcttat attgatttca acatgtcttt tccgctacca gggctctgag
      481 gcaagaggag agggtagcag tcatagggga agtagagggt ccctctagtg ccttctacct
      541 agcaaatcct cacgtttctg tcatctggga ctctgaatac tcctttaata cgcttgaagt
      601 cagaaacggc agccagactg gaaatactca actgtgatta aaagttagtg gagacagtaa
      661 aagcgataaa gcataatcac aggatgagct atatctgggg catcagtaat caaa
//
LOCUS       KCKM01003470             775 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54472apa ultra-conserved element locus
            uce-7309, sequence.
ACCESSION   KCKM01003470
VERSION     KCKM01003470.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 775)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 775)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..775
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54472apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>775
                     /note="ultra-conserved element locus uce-7309"
BASE COUNT          243 a          172 c          149 g          211 t
ORIGIN      
        1 aacacgaaag tggaagagaa tcactaataa ctatattctt tatcttcaaa aaaaatcaac
       61 aaaaccttgc ttcgctgtat gttccagtgt actacaggca ggcattatcc agcccctttc
      121 tgaatgttgg caggagagtt tgctttccca actctgtgaa attctaaaat ataatggaaa
      181 cgcagctacc gtactttcta agctcttggt agatattttc acttactttg tcattttcag
      241 gggggaaaca atggtggcat ctgtgccctg gtgctaagtg ctcatttgca tgcagaggca
      301 gagagatatc cgtttattat caattttatg cattacttca tttcatggtg ttaaaacaat
      361 tacattcaaa gggttcagca gtccacagcc aagctattca gggctccagc agcatcatat
      421 aataacgtta ttcagggaga gacacataca tcatagttta ctgacttaga aataaaaaag
      481 agagcgagag ggagagagag aaccaactcc tatagagctg cgtacagaat ttgtaaaaca
      541 ccagagatac tacaataagc agagaaactc agggccgacg gacatgaaat ttattaactt
      601 ctgaattact ttctaagaaa gttgggtgaa ttttttcaca cgccagtccc accaacctct
      661 ctgccacata cactctctct gccttttata tgaagctctt catcaccgtg acttacaaag
      721 ctccacttga gccaagaagc cgggagtgca cctcccctcg gagatcctgg aacac
//
LOCUS       KCKM01003471             798 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54487apa ultra-conserved element locus
            uce-3443, sequence.
ACCESSION   KCKM01003471
VERSION     KCKM01003471.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 798)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 798)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..798
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54487apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>798
                     /note="ultra-conserved element locus uce-3443"
BASE COUNT          243 a          145 c          133 g          277 t
ORIGIN      
        1 ttgtccttcc ttcctatccc atcttcagta ttccagggag agtgtggtgt taccattttc
       61 ttattttaaa cttggtcagc acctatcatt ctcagagagg tcttagtatg aaataaaagt
      121 accttcggaa atgactaaaa ggtatagctt caactaggag ctccatttgt ttttctttta
      181 gactggttaa aaaaaaaaaa aaaggtctgt ttcaaatcct atttgtccct tatctctgtt
      241 tgttcagttg tttttaatat cacgtactga aagaatttca atagctgttt caccatgaag
      301 tcatttgtta tccttcagca ggccttgcct gctgaattgt aaagcagcct cgactatttg
      361 catcctccag atggagcagc atataaacac tcccagatat ttctggtaag tatgaaaaaa
      421 tatcttattt gtcctttctg tgaataaata agagaatgtc aaattttata gactaataaa
      481 tttgtatgcc ggcactgaca ttgaatctct catggcctgc aatgtcacag accctgagaa
      541 acacaatttt ttgtttccaa atgtatacta agtcaaatag aagctcaata aaaagccagg
      601 gaatttgatt gcattgttta tgtctgccca gtagtctaat tcagttgcaa tttgctatga
      661 ggaaatgcaa tttacatttt tcccaggctt attgcataag caatcactca catatacatg
      721 catgagtgta tgtcaaggag aactcaaata atgggttaaa gcgttcattt aataatatat
      781 tctaatgtct gtttttat
//
LOCUS       KCKM01003472            1226 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54503apa ultra-conserved element locus
            uce-2004, sequence.
ACCESSION   KCKM01003472
VERSION     KCKM01003472.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1226)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1226)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1226
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54503apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1226
                     /note="ultra-conserved element locus uce-2004"
BASE COUNT          336 a          252 c          219 g          419 t
ORIGIN      
        1 tcttcttaaa tgttcataat tgaggcattt caaatttcca tccattttgc agatatagca
       61 ccagacacag ccagtctcaa agtttagtca gcacaggttc ctacagaaaa catgaaagca
      121 agagcttgac atttagctgt agaagaaaaa atgcccatat actgtgatag tcttcacttt
      181 tcacacctac tcagtgtcaa cacctgttta gctgtaaatt tttgaaaaag caatgactta
      241 ctttaatatt gctgcaaaag tactttattt ctacataaat tatttatttc aatcttattt
      301 catattattc aacataagct atttctagta tatatctgta atgtattgtg gatacaaaga
      361 gaatctctga tgatcacata ctagtgagtt ctagaaaggc agataatttc cttcacttaa
      421 taatagtttt ctttcctctt ggctgcagac tttcataact agcaccatgc caaacattcg
      481 aagattggat tatggcctgt cgtacttgat tatttttgtc agcatgctga cccagggtgc
      541 ccttttcttg tgttgttcct tctgtttcca tttttcatgt catccagctt ttcatcttgt
      601 caatcagctt ttgacttcct gattaaagtg tctgtcacag gagcagcctg gtctccagtc
      661 agttgtttaa tttgttcctc atggcatcca attgagttat tcatctggcc cagctgttcc
      721 caagtgcttc cagcatcact ttttcatgtg tttgggttta acctctatat ctatgtacaa
      781 cagtgtgaat tgttccattc attctgttga ctgtggattg ctttgcctct gtctaatgcc
      841 ttgacattgc taagactgct gctactgtat tctgcggctt aaccagctga gagaaaagca
      901 gtatttcacc ctgatgttat ggtaacgagt acaactaaac agactagttc tcaagcatta
      961 tagcaggccc aatttttaac aattaggaat gtgtaatgga aaactctgct ctcagagatt
     1021 tgaatccacc caaaaaaata atgttgatga tgcttggcag gaggagagac gttgctttgc
     1081 caggaatttt tagcattcac ttgaaatcag ttcacttcat tatcatgagg gatgtttgct
     1141 cggtgccaag tctaggcctg gtataaccca gccataactc ccagtgactt atgtgggagt
     1201 tgcacaagct cacagcagtg ctaaat
//
LOCUS       KCKM01003473             528 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54517apa ultra-conserved element locus
            uce-1035, sequence.
ACCESSION   KCKM01003473
VERSION     KCKM01003473.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 528)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 528)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54517apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>528
                     /note="ultra-conserved element locus uce-1035"
BASE COUNT          160 a           96 c          113 g          159 t
ORIGIN      
        1 tgtgtgtgtg tgtgtatata tggtagcctg aggctgccag acactttgcc tgctgaatga
       61 attatagaac aggaagcaga tgggctgtgt atatgaaaca accactatct ggaatgatgt
      121 gctgtgcaat ttggctgcaa agattaaatt gagctattga atgtttaata cactatgcat
      181 aacaaataca accagagcca caaaacagca taaattacag aattggtatt cacgctgcct
      241 ttctcaggaa tcaatacact gccacagctc ataagagtct gttgtttaat acacataaag
      301 aagagaagaa ttcttctatt aaaatgagtt atctgggcta tttaccaaag gcagtgattt
      361 aacagtggta aagtccatgt agtgctgttg aatgcagatg ataatacttc ttgtccttgt
      421 cggcctattt cattgctcct atcagttgct gctgctgcaa gctcccctgg gtacattagc
      481 agtcagccca ggaagtgtgt ttaagtaatg gacataatgt tcacattt
//
LOCUS       KCKM01003474             810 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54532apa ultra-conserved element locus
            uce-1752, sequence.
ACCESSION   KCKM01003474
VERSION     KCKM01003474.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 810)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 810)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..810
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54532apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>810
                     /note="ultra-conserved element locus uce-1752"
BASE COUNT          250 a          144 c          167 g          249 t
ORIGIN      
        1 ggcgagaagg gggaagaatc aacgttgctg ttcttaagac gaacctatct gggtaggttg
       61 gccaaacttt ttaaaactgt aatgcaagaa ccaaataaaa ttatgcactg tgatgtggca
      121 ccaactaatt agaaagatag catgcgtttt ttcacgtaga gtgaaaacga aatgagaaca
      181 tactatggct tggaagttgc aaagaggaga actcctaact accattttga ctgatcaaga
      241 gactaataga acctcagcag gccttgttca cgttatgcag aaaaaaaaaa aaagtgctgc
      301 agtttagata cctctggaac ttttccacag tgtcacaggt ttgtaatact tgaagcccta
      361 catttctaag aatatatttc ttgctcagtt gtttcaggca agcccaagac tttgtaactt
      421 ttaaggggcc caagattttt tttcaataac agaccagctt cttattcctg cagttacaga
      481 tgtaatttcc tttgtcaaac ataaggtacc aaatataatg caataaaatg ttttgaaaaa
      541 caaatgtgtg aatatttaaa ccaatctctg ttgtacttgg aaaatgtatg ggttcactta
      601 gagtgcagct cagggttggc tttctgtgcc gtccagttgt cactgctgat gggtggctgt
      661 tgagtataac gtacaaatgc attctatgta aatactgaat gtctgggaag tcctgtaatg
      721 cagaatgctt tactacttgg ctcttaagtt ccaccagtgt taattttatt ttccaagtca
      781 agctgcagtc tacgagtcta ctgtgttagt
//
LOCUS       KCKM01003475             901 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54547apa ultra-conserved element locus
            uce-5450, sequence.
ACCESSION   KCKM01003475
VERSION     KCKM01003475.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 901)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 901)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..901
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54547apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>901
                     /note="ultra-conserved element locus uce-5450"
BASE COUNT          273 a          167 c          204 g          257 t
ORIGIN      
        1 ctgctccggg aacggcttgt taaattctcc ttagctacac gcgaggagag gcatttgcgg
       61 gcgggcgttt gactccagag ccacggcgtg gctgcagaat gattccgagg agtttgccag
      121 ggaagatcgg atttattgta aatacattag aggaaggttt ttccacccgt gtttctttga
      181 tgcgtgtgtg ctttgtatct ggttaccggg tctccccgta cagttgcata tattaaagct
      241 tttaggaaat atagtgaacc caaatatatg acctttaaaa gcatggttga gttgcattca
      301 ttttataacc atcaaagcaa ctctttactg ttgtaaggta gaaaaatcaa tgatgcaatc
      361 tttttccttt tgcctcgtgc aatccgtaat tgaaatggaa aatcaaatga acggctaaca
      421 gataattgtt ttatcaatat tccctgcctg ccctacaagg gtcagcctag aatgatcatg
      481 agccacggat atgatgagga caaaatgtga aattgaacag caaggaggca ataaatcaac
      541 cttgacaaga aagagtgacc agcatgtagc tcttgtaggc agcttttggg acactttttg
      601 tctcaggtgt ctgcactgat ttaaaaatgt gagaatataa tatttgaagc tctaccagcg
      661 gataaacaac tgcagactat ttctaggtta aggcgtcatc aaagcaaaca cgctgaagct
      721 gaaaatatga ggatattggg gcacagtggg aaaaatccca cagtaaaaca acaggggaat
      781 atcagaatat tctggggctg ttgcaagcaa gacattcttg tttcttcctg tctggtgcta
      841 gtaaactaaa aaaagatagt aaatatatta aaccacattt ttcaggctgg tcttttgctg
      901 c
//
LOCUS       KCKM01003476             666 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54562apa ultra-conserved element locus
            uce-5995, sequence.
ACCESSION   KCKM01003476
VERSION     KCKM01003476.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 666)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 666)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54562apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>666
                     /note="ultra-conserved element locus uce-5995"
BASE COUNT          185 a          167 c          186 g          128 t
ORIGIN      
        1 gaggcgctgc agagcgccag ggcagtatgt cggtctccga gtcgcagttc ctcaagagga
       61 acggcaggta tgaggacgag catccttcct accaagaagt gaaagcccag actggcagct
      121 tcccagttaa aaacctgacc caaaggaggc cgttgtctgc aagaagctac agtacagaga
      181 gttacggcac atcccaaacg aggccggttt cagcgaggcc tacaatggca gctctgctgg
      241 aaaagatacc gtcagactat aacttgggta actatggcga caagccttcc gataacagtg
      301 atataaagac aaggcctacc cctgtgaagg gaaatgagag ctgtgctaaa atgcccgctg
      361 actggagaca acagctactt agacatatag aagctagaag gttagacagg gtatgtttgg
      421 catttctctg caattaatgc ctttagttgt gtgtttcggg atgtcgaaaa atattcgcac
      481 gcgcaagtgg tgaccaccag aattcccagt aacaaaatcc ctgcgtcggt gtcggaggaa
      541 ccggcccgca gatgagggcc ctgggggtgc tcccagagcg agggggtccc cggggaacaa
      601 acgactctgc acgagtcgtc gcacacatta cccgtgtagc agccactgcg gcactgtcca
      661 aaataa
//
LOCUS       KCKM01003477             603 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54578apa ultra-conserved element locus
            uce-2345, sequence.
ACCESSION   KCKM01003477
VERSION     KCKM01003477.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 603)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 603)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54578apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>603
                     /note="ultra-conserved element locus uce-2345"
BASE COUNT          184 a          135 c          137 g          147 t
ORIGIN      
        1 taaactcgaa gacaaaagaa atccccttgg aacactaatg tgaaggtaaa catgcctgaa
       61 gttatacata caagttgtat taatctcaga agataataaa gaccactatt caaataaagc
      121 ctggggcaca tcgtgatgcc taggattcgt gcgtggattt caactgatcg aagactgtca
      181 cagtcctatt atcacaaaac ctgtagcgca cttccagcat ggaggaccca tctgtgccca
      241 ccgtccatct gtttagacat gactggcaaa gtggtaggga actcgcagtg gttgcctctg
      301 cctgaaagga ataaaccaca ggatcttcca gtgagtgcca aaaacttctg agaaggtctg
      361 ctgccacggt tttcggggcc ttgatctata gaagacagca ttattagtga aagacagcac
      421 gcccacggtg cacttcagtc agctagaaca atgcaggttg gctggggatc cactactgga
      481 ctttgatgaa ttgtgtccca gcatcatgaa tacagctttt ctttcattac agtgagactt
      541 aactctggag aacagaaact atcggtgtcg tcaatcaacc aaaggcaact tttgaagcag
      601 agg
//
LOCUS       KCKM01003478             886 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54594apa ultra-conserved element locus
            uce-3558, sequence.
ACCESSION   KCKM01003478
VERSION     KCKM01003478.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 886)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 886)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..886
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54594apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>886
                     /note="ultra-conserved element locus uce-3558"
BASE COUNT          253 a          166 c          169 g          298 t
ORIGIN      
        1 aatggatgcc tgattcacaa agtggcattc tgtgaccatg ggtattattc aactgccctg
       61 acttcactct tgtagagcag tagctgactg tggccagtca tcccacctat tcttttccac
      121 tgaacagagt gacatgagac caatggcttg gctgcctgag tgctgttagg tgaaactgct
      181 ctgacaataa gtttcgtgaa ttaaatctga tccccaggtc ctatgcaaac cagtagccag
      241 ttctccaaaa caaaactagt cagaaagtgg cttggcatcc tattagccca catgcttaga
      301 agattacgct gcttgtgtaa gatcttcact gtctttatta aactatttat ctgaggcaac
      361 ttcatatttt cttttaggat aaactggaga taatgcaatg tgcttgtttt aatttgcaag
      421 gttaactgat ctaattatct gtgtgtgttt atttaaatcc ttttgagcac taggcccttg
      481 caggtggctg ctttgttttc caccaacagg aaatctctta aaatgagatg atatagctca
      541 gtgggtcttc ttgtataaag gattttctaa taatgtatga atctattaaa gacaaagata
      601 aatagagagt ttatttacat taaatatatt cacaacgacc tattttttcc ttaaactaag
      661 aaggccaaat gacatctgtt tttactacgt taaaggatta tctgttttct acaaaggcat
      721 tagacaccag catatttggt tgaagctttt gacaggcact tccgttcttg cgtcaggcaa
      781 gttttttagt gtttgtgagt taatattttt gcaaagcctg tgaattgtca aagtttccaa
      841 gtttcagtga tgcaagaagt agaatcacag taccaaactt ccgctt
//
LOCUS       KCKM01003479             242 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54610apa ultra-conserved element locus
            uce-850, sequence.
ACCESSION   KCKM01003479
VERSION     KCKM01003479.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 242)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 242)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54610apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>242
                     /note="ultra-conserved element locus uce-850"
BASE COUNT           81 a           40 c           46 g           75 t
ORIGIN      
        1 taaacggatg taaactgtct gcctctcaaa actggtctgt gattctaagg atgccatgga
       61 aagaagaaaa aaaattacta gctctagtaa cagatgtgaa attacattag ataaatataa
      121 tcattagttt cagtctcacc ctggttaatt tgtttgtgga aatgtgcaac ccattattca
      181 ttaggtaatt tttcacacat tgattagaaa gccatgtcga attgtgaccc agcacattgg
      241 gg
//
LOCUS       KCKM01003480             541 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54625apa ultra-conserved element locus
            uce-2209, sequence.
ACCESSION   KCKM01003480
VERSION     KCKM01003480.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 541)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 541)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..541
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54625apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>541
                     /note="ultra-conserved element locus uce-2209"
BASE COUNT          194 a           88 c           87 g          172 t
ORIGIN      
        1 aattcaggat tgattcctac actgatttcc acaatatgat ttacatagta gctgagtgta
       61 aatttaaaat aatttggact gaatgatcct tactagaata gatggcctca agaaaaggat
      121 ggaaaataaa agcagcttta gtcagaatct aagcaatttg ctgccaaata caagcagcat
      181 ttccccagat tataatttac actgtattaa ctgtcaagag tacttttgag aaatatagat
      241 aacaattcag atgcaatcga tagggagtga cagttgattt taaagcttaa tgcaagacaa
      301 gaaagaaatg actggggtat cagctctgga agaataaatt tgttttgtat ttgatttttg
      361 tgttaaattt attactgcca agaacagctc tctttcaata atattaagaa caagattgtg
      421 aaattgcaac atgtttgtct cccacagttt tcacagcata tccaatataa aatgatgccc
      481 cttctcagta ctataaatag atcaaattaa accgctatat atattcttct tctatccgca
      541 c
//
LOCUS       KCKM01003481            1110 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54641apa ultra-conserved element locus
            uce-1290, sequence.
ACCESSION   KCKM01003481
VERSION     KCKM01003481.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1110)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1110)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1110
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54641apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1110
                     /note="ultra-conserved element locus uce-1290"
BASE COUNT          334 a          214 c          218 g          344 t
ORIGIN      
        1 ttgtaattaa atgttctgaa actcagtgta tcagaatcac attctcttgt gtgatctgtg
       61 ggttatagaa gatttggcca accacaggaa atcagcaggc atttaaaata tattcgtact
      121 tgctgtcaca gaggttttga gtagcaaaat gttgataatt ttataatgtg tgctttatat
      181 tcaatgctga ggacccactt ttaaattaaa acaagaattc tcttatcaaa ggtatcagga
      241 ttgcctaagt gtgaaatgtt tccaattaaa atttcattca tgtttagcca atttttcaat
      301 tgaattaaaa aagcataaaa tacatataat ctaacgtatc ctctctgaag agtgaagtct
      361 ttattctgct gaattcagaa gagcctcatc caatataatc actgcattca ttccaattat
      421 aagagcaaag ttgtgcagac ttcttatatg ttatgcaatg tcaagaagca cagtgcacag
      481 cactaattcc tcaagtgaaa gaggcagcga tttcccacag cagctccttg atttaaatta
      541 cagagcacat ttattatgct tctgttcctc tgactgtgaa ataccatagt acagtagctt
      601 tgttctgacc tcttctccaa agccctgcct caaagtgtga ctaatctagt gctggatgac
      661 agctaacttc aacatcagac aacacgaaaa ttgaagacac tttttatcct cttgccaatc
      721 tgcgagtgtc tgaataagcc tcgtcaactt cattacaaac tcatcatctc ttgtgtagat
      781 aatgatagcc taggctggtg gagaactcag cttcttgttg tttttactga ctctctctgc
      841 ctccaggcca agcatctgtg gggataatga atggagcaat tcttttggca caaaacaaaa
      901 ggctcttggg gtggggaaag gcccgtggcg tcagtcgagg cccagctctc acaagcgaaa
      961 tttctttgtt atgaatcagt tctcagaaaa tagctctgta gtaaccagag aagcgaagga
     1021 cacagagtaa ctttgtactg tggtgggagg ttaaaggcag tggccatgtg aaagaatttc
     1081 agaggggttt tattctcttt cttcagattg
//
LOCUS       KCKM01003482             391 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54656apa ultra-conserved element locus
            uce-3801, sequence.
ACCESSION   KCKM01003482
VERSION     KCKM01003482.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 391)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 391)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54656apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>391
                     /note="ultra-conserved element locus uce-3801"
BASE COUNT          116 a           58 c           64 g          153 t
ORIGIN      
        1 aatagtttgt gaactgttac ctcaaatagg agagaaagaa gagtgtgttt ttattttaag
       61 attaatttcc aatttgtcag tatgctttca tccaatatta tttcattcag gtgagttgca
      121 cttgatacct acattctcat gaatgtttgc tttgcctatt tcagtgatcg ctgtggagaa
      181 gacccaaacc agaaagtaat ccatggggtt attaactcct ttgttcatgt tgaacagtat
      241 aagaaaaaat tccccctaaa ggtagatacg cattttctaa tttatgtttt taattctgaa
      301 tgttaatcta gtatatgtat tgtttatcct tttaaaaaaa aatcttcctc ttagttttat
      361 caggaaattt ttgagtgtcc ttttctgaat g
//
LOCUS       KCKM01003483             858 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54672apa ultra-conserved element locus
            uce-2001, sequence.
ACCESSION   KCKM01003483
VERSION     KCKM01003483.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 858)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 858)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..858
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54672apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>858
                     /note="ultra-conserved element locus uce-2001"
BASE COUNT          262 a          173 c          163 g          260 t
ORIGIN      
        1 ggctcagtgt aaaaacctca tccttctttt tgtaaacctt gaagacattt atctctgtca
       61 tgtgtattca gatacttagg aatcttttct atctctcctc tgagacatta cagaacattt
      121 tccgtgtata tcttagtgga cttggtcagc acggtatcca ttccatctac ctccagcttc
      181 acctgaaggg caaaatcctt aagatcttga cacaatactg ataaatacat ggaattatta
      241 aagttgccac ctcagcagaa tagaattgct gctgcctttg ttctcagggg aatacatatt
      301 tcacccagta gcaagacacc caactgctac tacaatcaaa actctctgaa atgcctttaa
      361 gctaatcatc tttgaacata agcctttgtt gttaaatcag ggaccgtcta gatgcaaggc
      421 acagaaacct tttttgtttt ttctccacct tgcacaaaac agctttaagc ctgtcaccac
      481 tgacagtaag gttcagtgat ctgtcaacat tcacccctga taaagatggt gagagaaatc
      541 cgtggctctg gagagttcag tagagaccaa gcactatgtt tgcaaaagag catttttatg
      601 cgttttcttg tgacagcact agtttaacag aaaatagttg gagtgtgcca gaaaaagaga
      661 aagaaaaggg aagacagaag tagtaagtta ggctagcatg acatgatgga tctgggctat
      721 gacaaacaga attggaaaaa aacttccctg ggaccaacta taccaggttt gctgaattgt
      781 atttcttgat ttcttactgt gcaacagtgc tttttagtgt tagattgact aggcttcaga
      841 atatttttaa aattgtac
//
LOCUS       KCKM01003484             943 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54687apa ultra-conserved element locus
            uce-3932, sequence.
ACCESSION   KCKM01003484
VERSION     KCKM01003484.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 943)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 943)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..943
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54687apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>943
                     /note="ultra-conserved element locus uce-3932"
BASE COUNT          277 a          185 c          191 g          290 t
ORIGIN      
        1 tttaagtggg ttttgctttt ctgtgtctat ttctgcttgt ttttctggga gagaaggaga
       61 cattactaac atgcagccga cataatgagt cccattaact cccaattcag cttgcttttt
      121 gaccacctct cttttaatga ctgtactttt cttgactgca aagtttgggg agtaggaaaa
      181 ctgttcgctc tgctggattt taatacatgt ttacatcctt ctatgcagaa cagcacacct
      241 ctcaattaat gttactgtta gccttaaagg agcacttggt aataaataaa taaatgcgtg
      301 tgcattggaa aagtgtggtg tgaaccagaa tttttacaaa ggctgctgag cctttctaga
      361 gactaagcag catttgtgtt ctaatatttt aaagcctttc cattgatctc ctgttaactg
      421 agaagcaaga attaacctca atgacagtgc tagtagctct gcagtctatt ttggcctgtt
      481 ctttaagtaa aaagagcaac ctagatgaga attttgtgct tcactggata ttgaaagatg
      541 aggcaataaa ctgctaaact tgagtaatca cacactccca gaggaatgcc tcaaatgggg
      601 ttggtcaaaa accttgaaat tctagccttc tgcacactgc ctgggcttta acatttgatg
      661 agagtcatta tagtggggga ctgaatacaa gtgtcttctg attacagacc ttccattaaa
      721 agttcccacc agtgtgcctt tccatagaga agcgtcaatg ggattaaaat ctcaattcac
      781 cccagtcaat tctccagtaa cacgatttca ttagaggcag gcagggagga aaatggacta
      841 gaaagcactg aaacagctgg tgtataaatt ataaagtgta ctttctacta agtgaacaca
      901 ccttccgctc agccacatta ctaattaatg tgtagggtag ccg
//
LOCUS       KCKM01003485             950 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54702apa ultra-conserved element locus
            uce-1037, sequence.
ACCESSION   KCKM01003485
VERSION     KCKM01003485.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 950)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 950)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..950
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54702apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>950
                     /note="ultra-conserved element locus uce-1037"
BASE COUNT          308 a          179 c          146 g          317 t
ORIGIN      
        1 aacatcggtg atgtatgaaa agattgcttg tttacagtcg gtacacagat ctttgccttt
       61 ttcatgaaag gaaaggaaac cagcaggaga attacaatac ggagcacctc ccaggatctc
      121 tttcaccatt ctccccattt gtgtattaag caacaaggca gctgttgaac aagtactatc
      181 aacaaagcaa tcttctagcc ctttgattta ggctattcat atcttctgcc ctgaaataaa
      241 atgactttca caattaaaac actgaaatca atgctgtatc tattgtcatg tctgcaggag
      301 aaaagcttta attacaaccc cagttagata acacaatcat tacacctcct taatctcaaa
      361 tacaaaacca gtaccctttg agtgctatgc catcctttct ttgatttttt ttatgtgaat
      421 ggctttttat ctgagcactt taatttgcat gcctttgctt cgaggcagct ccccgtgata
      481 tgttaattgc agagtgcttt aagtactaaa agattaacat aaaacccttt gcaaacaagc
      541 taatagttta tgataatttt tgcatggcct ttgtctgtct atcactggat tgcctctagc
      601 tgtaatttta taaagaagct gtaaaatatc atttaaacaa gttcatttac acataattat
      661 taccagaatc acattattca atttagatac tccagcctat taacaatcca tgaactaaaa
      721 tgtaattaaa ctgttttcct tttatgaacc tattcattac aatgtgtggg agatggatct
      781 ctcagtttca ctgaaaattt cagcactttg ttgttggaat tgacaagtct ggcactcatt
      841 ctgtgctttt aattatacta aaagtacttc aagacagcta agataaagaa tatatttaga
      901 aaagaatgtg tagaaatgcc aagatggtgt catagaaaca tatatttatt
//
LOCUS       KCKM01003486             936 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54716apa ultra-conserved element locus
            uce-6273, sequence.
ACCESSION   KCKM01003486
VERSION     KCKM01003486.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 936)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 936)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..936
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54716apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>936
                     /note="ultra-conserved element locus uce-6273"
BASE COUNT          287 a          200 c          171 g          278 t
ORIGIN      
        1 taaaaccaac ggcaacaata gcacaaagcc agagcaatct catttggagg tcgcaaacag
       61 tgtaggaagg taaatggtca gccacgatga aaaacgtgaa aaacaaaccc gaaggcaata
      121 aacaagattc aaagcgacta catctcacct aaaaagggac gccttttaat catgtctata
      181 ttaatgcttt ctcagaaacc tgatcaccca tcagccatgc aaacttgcaa cccagcagca
      241 tctgtttctg attgaataat gtctcccaac tatatcttta gtctttcatt atgttttttt
      301 tttagttttt attaaagaaa aggtcttacc tggcctgttt tgtattgttc tctccactct
      361 ctatttttaa tctaaagtca tttcaaagag tgagcgtcag atatcaaact caatatcctt
      421 tttctcatta gcacttttcc cgtgcagacc ttcaaatgcg gtaataatta atgagtctgt
      481 gtcagaaaat gaataaaaga tggctcagat gcttcactgt tcagggctga cctttagctg
      541 agtctactgt attaatatat tcttgtgttg tcagactcaa agagctaact gccttatgaa
      601 ttatttatca acacaaaaag tcttaaccag aaacagtgtt aacattaatt tctaaccctc
      661 tgtgtcacag caaagcctgc ctgcactgca taattgaatt ttagttttag acaagcaatc
      721 aaagcacaag tcgctgttgt tgtaagtgtg gctgcctatg atagcaagag gaacggctgc
      781 tctttttgca catctggtgc attacaggca gttcaggttt ctgtgagcaa taagctcgac
      841 tggagacaaa tgtggaaagg gtttgcagca atgagaagca ctgtggcacc ctcctcccca
      901 gaacaattcc agatgctcaa ctgcttattg tcctgc
//
LOCUS       KCKM01003487            1012 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54731apa ultra-conserved element locus
            uce-4678, sequence.
ACCESSION   KCKM01003487
VERSION     KCKM01003487.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 1012)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 1012)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54731apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>1012
                     /note="ultra-conserved element locus uce-4678"
BASE COUNT          311 a          169 c          228 g          304 t
ORIGIN      
        1 agagtagtga gagaatatga gaaaatactg ctcttatgac ttcagagagg aaataatgag
       61 aaacttgagc agtatgtgaa gtatttgcat aggaaacttg tagctaaata aggcttgaac
      121 agtaatcctt caaagataat tctaactgga aaatgtgtgt gtgtgtatac agtgttttcg
      181 tgaaacactt ttgaatttca gtttagtgat gaaaaactta attttcttgt tcctaaagaa
      241 agcacactgg ggagtgcagt ataaattgga gagtaatcag agtgtcttgc tcatgtatct
      301 gtcgagtttc atatagtagc tgactgcttt actgtgcctt atggagctct gattgcaata
      361 tgctgtcaag agccaacagt ccgtgctatt tatttggctt gatgccaagt ctggctcctt
      421 gattcctcaa gaagttgcta tcagcccaga gggggcaaaa ccaatgagcc atagggcatg
      481 ctttttatta aagaggagtc aaagagcgaa aagaaaccac atcagctgct gtcaatactg
      541 agctagtgcc agaaacccca aggctaccac tgttgcagaa caactgccaa gcactataaa
      601 tctgagattt actgtgacgc aaagtttcct taagagctta atttctgaag ctactgtatt
      661 acttttctca aagtgctgta tttttaggta aaatccactt gagggagtga gggttaagat
      721 ataagtgtga ttttgatgaa tgaaagagct gcgccgtgtg tgggttcttg gcaagtagcc
      781 acgtctttcg ggatcataga aattattgat gacacagaac actcgtatgc ccttagcctc
      841 tgcagctgat tcaacacaga acaaaatgct gtctagagag gaaaagtttt atattaaact
      901 attaaactaa tggagatttt ggtgagaggg gagaggttat tcattcctag ccaatgttgt
      961 gtatttttaa agccttatgc caagtagtat tcaaacacaa ttcttgctct gt
//
LOCUS       KCKM01003488             622 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54745apa ultra-conserved element locus
            uce-4343, sequence.
ACCESSION   KCKM01003488
VERSION     KCKM01003488.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 622)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 622)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54745apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>622
                     /note="ultra-conserved element locus uce-4343"
BASE COUNT          212 a          113 c          108 g          189 t
ORIGIN      
        1 aagacgacca attgcaaaat tggtggaaaa cttaacatgg gcgttttata gcatcagaaa
       61 attctggagg cttccaaata aactcataat tcagaagcat ttgagagaca gcaatgcatc
      121 aataatagat ttttggtagg ttatatcctt gaaagaaggt agatagtata gcagacaaaa
      181 taaagtcgtc ggtggcctaa cacattgcaa gtggtttgtc acctacagca ctgcattctt
      241 taaagatatc caacacacac acgcacaaaa acatctctca agtgaattta ttgactaaaa
      301 ccagttccac agaaccaatt agtatcttac acaggctgcc ctgcaaggct tatgaggcca
      361 tccatcactt gtccatttaa ctatttagca tttgttccag caatttgtca cactgtcaga
      421 aaggtagcat ttcagaatag tttttggttg aaagaaatct aactcagata gtgcagatac
      481 ctcttttttt aataagactt acacaagatt tatgttacca ttatttttaa ccttaagcat
      541 cttgcctgga aggtgaggtt aattcttggt atttcaaagg ttccacattt aaatatgtta
      601 ttatatatga gagttaaaaa gc
//
LOCUS       KCKM01003489             527 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54759apa ultra-conserved element locus
            uce-4285, sequence.
ACCESSION   KCKM01003489
VERSION     KCKM01003489.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 527)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 527)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54759apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>527
                     /note="ultra-conserved element locus uce-4285"
BASE COUNT          175 a           68 c           98 g          186 t
ORIGIN      
        1 ttttggaatt taggtgaaca ggactatatt ttattagatt gcagttttaa aaactgaaga
       61 caagatcaga aggtaaatct atacagttct tattaggtta tgtttacaga ggaagatgtg
      121 aaattctacc tcgcagaact ggcccttgct ttggatcacc ttcacagctt gggaattgta
      181 tacagggacc tgaagccaga aaagtaaagt aaaatgtatt ttaccgctat ttcgtgtatt
      241 ttgcttgttg ctttgcattt tctgctacag tgatacagaa cctttagact gtgtaaacaa
      301 atgtaaaatg taaaaaatga gtttaaatat aatgatattg gcttgttaaa ttaataacaa
      361 gttggagata aaaattgttt aactattata ttttaaatgt tatatgtaaa cattcctcta
      421 tgtgtattgg tgaatgtgaa ttttaatttt cagcattttg cttgatgaag caggacatat
      481 caagttaaca ggtaggtaaa acttcccagt attgcacttt ctgaaca
//
LOCUS       KCKM01003490             624 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54775apa ultra-conserved element locus
            uce-7229, sequence.
ACCESSION   KCKM01003490
VERSION     KCKM01003490.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 624)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 624)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54775apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>624
                     /note="ultra-conserved element locus uce-7229"
BASE COUNT          193 a          121 c          114 g          196 t
ORIGIN      
        1 gcgccagccg taggcaatgg ataaaatgaa ctagttagca atttaacctg tacagagtgg
       61 gatgaacaat tttctgccat caaagcaaat ggctaacatt tagcaagatt ttatttttat
      121 ttttcagccc atcccatcct caagaagaaa gaagtcaggc taacattttt tctgggtcct
      181 aaatcttcct ctcagcctat ttctttaatg gtttaaagta aatgactatc cagaggataa
      241 ttaggcactg tgctgtcgca tcgtgtcagg tcacagctgg atttagtcag cattaacctt
      301 tggggagaat tggaatatca gtatcattta aaattaaaga cgtgcaagca ggcatttctg
      361 gagatgttag aaaagtaatt gtctgtaaat tgtttgacct tgagatttaa ttgcatgcac
      421 aacacacatt ctagcaagaa ccctggactg tgttcagtct ctttgacctc cgtacctctc
      481 actttgcaga accctttaag ctacctgtgg atttttctgt aaaatattaa agattgtttt
      541 ataccgagaa caaaagcttt taagcaagac ctcttgcaaa caaaactgct aaaagctgta
      601 gtatagatct tacctattcc aatt
//
LOCUS       KCKM01003491             456 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54791apa ultra-conserved element locus
            uce-5832, sequence.
ACCESSION   KCKM01003491
VERSION     KCKM01003491.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 456)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 456)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54791apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>456
                     /note="ultra-conserved element locus uce-5832"
BASE COUNT          152 a           89 c           66 g          149 t
ORIGIN      
        1 gtggatatta ggaaaagtca cttgaataaa aaggaacttg cacataatgt aacaaaacaa
       61 ttgctatttg gaaagccctg aaaaaactgg gcaatgtaat atgatatttc ttaacttcat
      121 ttcccatcca ttgcagaaat cataacaata aagttttata cataagcaac tttatgagct
      181 gaaagaagag aatgtataat tcctttcgac ggactaagcc aaaagaaatt aagtgattct
      241 tctctgttag cctcctgtgt aaaatttttc tccttatcat ctcatctagt catatctttc
      301 tgcagtttga attaccctct tttcctcaat ctggtaaggc agtgaaagga tgtttgttct
      361 gctaattaac tttattaccc tgataactcc ctgcagcctt tgacgaaaac aattaccgtt
      421 cctccttttt ttttccccac tggcaaaaaa aaaaaa
//
LOCUS       KCKM01003492             970 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54806apa ultra-conserved element locus
            uce-3912, sequence.
ACCESSION   KCKM01003492
VERSION     KCKM01003492.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 970)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 970)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..970
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54806apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>970
                     /note="ultra-conserved element locus uce-3912"
BASE COUNT          305 a          146 c          180 g          339 t
ORIGIN      
        1 ttttttatat tgcttatagc taatagatat tttctaactt tcaacaaaat ttattttaaa
       61 actgagggga aaaaatccag aagaagaaaa atcagagaca cagactactt gtagagaaca
      121 ttaaggcttt gaaacaaact aagaaaagcc caagaaatcg aagatgaggt tgacatggta
      181 tttttcactt gtgtctctgc accttcctgt ttgcttgttt ttcttccatg agataaggac
      241 aaagtgtcaa acaatattca ggctgttgtt gggttgagtt acaactttag cattgctgag
      301 acttacctct ttggcccgtg aatggtattt ttttgtcatg atgttgtagt tagaagaatc
      361 agatagtttt aaagcatatt caaccatcct ttttacttac ttttaatcaa cttgttcttc
      421 caaacaaggt atggaattga tagctgttat tgattgcttg tagcattacc taatcttcac
      481 taaatgtagg aagcttttca gatttagaaa ggtggcagaa aatgtctagt aatgatgctg
      541 ctgggaattg aagctcaata ccatggtcag tataaaagtg atatagctgt aagaggtatt
      601 ttattataag cccgttgttt tttacttaaa tgccctagct gctgtaattt acagacattt
      661 tgaagatgct tatatatttt tcagctcttt cagtgttaac ttttattaat gacagcatgc
      721 tgaaactttg gaagactaca gaatgcaaag aatacagtac tgtaataatg tagaaaagag
      781 atggcattta tgctttcaat acaaagggga aatgtaagaa atcattacta aaacagatat
      841 aaacgtgacc ttcactgtgg ttcagtaatt atcccagtcc agactatggt gtttgtatca
      901 tgatttccct tatttcctct ttgttttcat ttttatctgg gtacttcact ggtgagtaat
      961 agctaaaggg
//
LOCUS       KCKM01003493             734 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54820apa ultra-conserved element locus
            uce-445, sequence.
ACCESSION   KCKM01003493
VERSION     KCKM01003493.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 734)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 734)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..734
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54820apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>734
                     /note="ultra-conserved element locus uce-445"
BASE COUNT          230 a          133 c          120 g          251 t
ORIGIN      
        1 aaaaagcatt cttatttttg gctactttct gactttcaac tgttgcccta actatgtgct
       61 caccagcatc tttctcataa aacttctgaa agaatcacag aattggtgtt tttacagtgc
      121 agtagaactg ctaagctttt gcctcgtttt tgattaattt catgcctgac tcagtcagag
      181 attaggcctt gacacaggtt ataattaaat attgaaatca tgaagtgcaa gaatgtttaa
      241 tttttaaaat atgagtttta atttacctca tacagagaat agctctggtc acctgcagag
      301 atgcattaca cactacattg cctaatgtag gatgcctgaa taaggctgag catacagtta
      361 aagtaaacta atgcaattta ctgaacagca gtcaaatatt tatccagttg atgaagcaga
      421 ctttatgtga aactcagaca ataattaaag agaagccttg cttaaaacat gcttattcca
      481 gttttcacaa atatgttata ccaaagcagc atcttccttt tctcaaatat tgatgttctc
      541 ctaacacatt atacagtcag cttgtccttg gcattctctt gactatttaa tgaatacatt
      601 tcctggcatt tgccttatct ttgttatgtt gttctttgga gagttaaaac tattagttag
      661 cccttgacag aaaaacatca gagcaagcta gttaaaggtc ttacagtatc agagttatta
      721 acacggtgtt tgat
//
LOCUS       KCKM01003494             611 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54835apa ultra-conserved element locus
            uce-3279, sequence.
ACCESSION   KCKM01003494
VERSION     KCKM01003494.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 611)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 611)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..611
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54835apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>611
                     /note="ultra-conserved element locus uce-3279"
BASE COUNT          135 a          197 c          155 g          124 t
ORIGIN      
        1 tttggaggaa aaagtcagtt tgtagattag cacagtgggc tccaaaaaca tcttctctga
       61 tttcccgatt actagaataa cgagaggagg cggcctgaag cggaggggga tgaagagaca
      121 attggtgaat cctttccgaa tctgttagcc caggggaggt tcccaagcgg gcttggtgcc
      181 gaggacaccc cgccagagcc ccaaggtgcc acgttggggt gcggagccca gagtagctaa
      241 ttgccggctc tttgcttgag ataactgtct ccatcagcgt ctctgccctt tattcacaga
      301 taactctctc cctgtttcta ggagaaaaaa aaagtgcgtt cgctacatac aaggtgaagg
      361 cagctgcgtc agcccaccct cttcagatgg aagcttacta gactctcctc cgtcctcccc
      421 cgccatgctc gcctccccct ccagagactc gaaaccacag actgaacaaa cgcaacccct
      481 ctcgctctca ttgaagcccg acccgctggc gcacctggtc atgatgccgc cgccatcctc
      541 cctcgtcctc gccgagagct cggcgagcaa gcccggcgcc ctgcctgccg ccagctgccc
      601 caacggggcc c
//
LOCUS       KCKM01003495             706 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54850apa ultra-conserved element locus
            uce-7353, sequence.
ACCESSION   KCKM01003495
VERSION     KCKM01003495.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 706)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 706)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..706
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54850apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>706
                     /note="ultra-conserved element locus uce-7353"
BASE COUNT          252 a          118 c          132 g          204 t
ORIGIN      
        1 ggatgaagga gggaatggca aatttgctgt gtttaatgta ttggacacca tctgtatttt
       61 attcaaatag ggttatatat tttgtgaaaa taaaaaccag cctcatgagt cagtgtgtgc
      121 aaggcagtca cttgaatatc tgtaatggga aacatgtttt aggttggaag ttgcaaaggg
      181 aaatcaaatg tttgaagtgt caaagttgga aaaaaataaa atacgcctga caccgtagct
      241 attgaagcca aaatgaataa atcatcatct caggaaagaa aaccccacca agctcttggc
      301 tataaccttc attttcctac gctcaaataa aattacatac aacctgataa tttaaccaga
      361 cttgtcaata agagctgatg gcttcaacag acactatcac ttcatgcttc actgtagact
      421 tcagaagcat ccagtatatt atccaagaaa taaatttaat gtcaaacatt tctcttcaag
      481 ttgaaagata gaagaacctt acgcagtgga gctaatgtaa aatatgtcat attgcagaac
      541 actagagtaa aatgaaatta atgccagctc agtagtttat tccccatgta cagcttttcc
      601 tgagtagtta tttaaaaaac atttcagtat ctttctaagt agggcaagca tgacttccaa
      661 gatggaattt gagagaaact ttgaggttac agtaacagga gcttga
//
LOCUS       KCKM01003496             610 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54865apa ultra-conserved element locus
            uce-239, sequence.
ACCESSION   KCKM01003496
VERSION     KCKM01003496.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 610)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 610)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..610
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54865apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>610
                     /note="ultra-conserved element locus uce-239"
BASE COUNT          184 a          127 c          102 g          197 t
ORIGIN      
        1 aataggataa ccccttaaca tgttggtagc ctatcaagct gcccctcaga cttgaccctg
       61 gggtgaaacg ggaaagtcag ctctgttcac agcaattcaa cttctgtgct agccaataat
      121 gaagtgacct gaaataatat aaaaccctta cctgctgttt gatgattttt gtctgggata
      181 agagtagaga tcctgattca gagtcacagt tcatttcatt tttcacttct gatgagatct
      241 cagctgttat cagataaaat tgaacaacta ttactaggct ctgctgagta aagccccttg
      301 actgctctta acagaaatcc tatacactcc actttgtcag cagttttgaa ttcatcgtcg
      361 caacaagatg ataggaataa tcttaccaac tgagattgac agttcatttc agaaatcaat
      421 atttacaatt tacttctttc aaagttcatt cgagagaaga ttccatatta tccctctcca
      481 aataagctga tcatatctca gtcgtccctg gaatgagttt tcccaaaatg tgaatttttg
      541 gtaaaaatca atgtcagcat tgtgcacttt aatctcgcct atgatgacag taaatcttta
      601 tctttttatg
//
LOCUS       KCKM01003497             429 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54881apa ultra-conserved element locus
            uce-39, sequence.
ACCESSION   KCKM01003497
VERSION     KCKM01003497.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 429)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 429)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54881apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>429
                     /note="ultra-conserved element locus uce-39"
BASE COUNT          155 a           80 c           67 g          127 t
ORIGIN      
        1 aaaagtactg tttatgcttt tatttttata ctattcatag taaactcatg ccacttctgc
       61 cccctcataa cagacaccta acaatgaaac agcttcaatt aagaagcaga acatcagcct
      121 ctggcatctt attctgttgt tccatctttt ttgctaggga gaattcattt gtttcttaat
      181 taagaaaaac accaatagca tgaaaaatct gctcatggta cctgaatggt aattaggtga
      241 aaggtaaaaa agaaacacac acatacattc cagtagcagc caaaatgaac ttgagctgat
      301 aaaaatgaac taaactaccc ttgcataaat cgaggctgag agaagtgtac agtcattatg
      361 gctaagacaa tatgcaaact atcttcaaag aaatcaaatt gctagagtgt tttcatttgc
      421 atgtattaa
//
LOCUS       KCKM01003498             494 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54896apa ultra-conserved element locus
            uce-3778, sequence.
ACCESSION   KCKM01003498
VERSION     KCKM01003498.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 494)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 494)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..494
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54896apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>494
                     /note="ultra-conserved element locus uce-3778"
BASE COUNT          121 a          110 c          102 g          161 t
ORIGIN      
        1 tcagctgtcc ttggctctgt ctgtccccct gcgctgctgc tgcctgtatg catattgcaa
       61 gctcattctg atgtgcgcta atgctattat cctccagaaa ttgaaatcaa gtctgaacct
      121 ataatgtttc actgggaggg aattggggtt atatattcct gtgtacagca gcattctatt
      181 tcagtcatag catttaatta tgattggtgt gttagtgccc accagagcat aacaaattgt
      241 cattatgtta ttctgctgag tctaatttaa ttggcaagtt gtcacaaaag caattatcca
      301 tcatttattt tgttgccata accacatctt ggagagcacc tgctgtctga agtggaaagg
      361 ctctgcagtc tcttggtcct ggatttcttc cacttgcctg acacaaagac accatttcct
      421 cctcttattt aaaaatcatt tcccagcgtg ggctcatgag caaggctgaa aatgctggag
      481 gagatgctct gagc
//
LOCUS       KCKM01003499             395 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54912apa ultra-conserved element locus
            uce-1243, sequence.
ACCESSION   KCKM01003499
VERSION     KCKM01003499.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 395)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 395)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54912apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>395
                     /note="ultra-conserved element locus uce-1243"
BASE COUNT          127 a           83 c           54 g          131 t
ORIGIN      
        1 catgcgttcc caagccagtt ccttctattt acattgtagc atttatccat ttccaaatat
       61 gagaagattt atctatcaga ttctgttcaa attcagtaca cagataattc gtgaaaagct
      121 ttctttttca aaatgttctg tggtttttct aatctcatct cttttctaat ttcctaatca
      181 tataaccttg aagtctaaag acacagcctg tgataatctg tgtaaactgt ctttattgtt
      241 atcacagaca tttataaaaa aaacacccaa aacaacacac acgcacacac attcaaagct
      301 gccttttaag taatacttta gtcacagttc aatcagatcc acattactgc tactcatcag
      361 atagaaagtg ttcgcgagca ggagggggat attga
//
LOCUS       KCKM01003500             341 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54928apa ultra-conserved element locus
            uce-1403, sequence.
ACCESSION   KCKM01003500
VERSION     KCKM01003500.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 341)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 341)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54928apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>341
                     /note="ultra-conserved element locus uce-1403"
BASE COUNT           95 a           82 c           71 g           93 t
ORIGIN      
        1 tgagcttctg tggatccaga agatagaaga gagctgcaga ccaaccgggg atttctctgc
       61 ccacctccac acgtcgtcgc gctcttcttc ccttccttcc acctgggtgg catcgcaagg
      121 cttcatccat tactttctgg catctcaatt gctcttgtgg gctcacccac catgtgtcca
      181 ggagtcactc atcaacaaca aacagttaaa aggaagaaaa taggctgaaa atatcaatgc
      241 actttggtaa caataaaccc agcttttaat ttatgctaat atgtagggtt gtggtgacag
      301 taagaacaaa attacagagt ggctttctag ctggtaatta t
//
LOCUS       KCKM01003501             697 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Apaloderma aequatoriale 54944apa ultra-conserved element locus
            uce-1021, sequence.
ACCESSION   KCKM01003501
VERSION     KCKM01003501.1
DBLINK      BioProject: PRJNA494020
            BioSample: SAMN10147544
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Apaloderma aequatoriale
  ORGANISM  Apaloderma aequatoriale
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma.
REFERENCE   1  (bases 1 to 697)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Rapid Laurasian diversification of a pantropical bird family during
            the Oligocene-Miocene transition
  JOURNAL   Ibis (Lond. 1859) (2019) In press
REFERENCE   2  (bases 1 to 697)
  AUTHORS   Oliveros,C.H., Andersen,M.J., Hosner,P.A., Mauck,W.M. III,
            Sheldon,F.H., Cracraft,J. and Moyle,R.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 18
            trogon species to examine trogon diversification history.  All of
            the UCEs from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..697
                     /organism="Apaloderma aequatoriale"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54944apa"
                     /db_xref="taxon:520022"
                     /tissue_type="muscle"
                     /geo_loc_name="Equatorial Guinea"
     misc_feature    <1..>697
                     /note="ultra-conserved element locus uce-1021"
BASE COUNT          221 a          143 c          164 g          169 t
ORIGIN      
        1 cagcctcggc cgccaccgct gccgtcaccc cactgggaac agggatggga acgagaaggc
       61 ggtcagggca gaggggagag gcaggtgggg gagagaaaaa aaaaaagaaa aattcaaatt
      121 cccaagtcgg agtaggagag gaaattaatg gcagcgttca agaagaatga tggagggaaa
      181 tatagaaagc agtcaatagc ccattctgcg ctgtacggac ctgacaggaa tttcacagtc
      241 tcttggtttt tcagcccact catgtgcact catcagaaac cagtcacatc tggctgccag
      301 gatggggggt taattttctc taaatgcctc agcagttttg ttctagctga ggcaaactct
      361 gtgactgcaa agctgatgag taaaatattt ctacttcacc cagtttaact caaaaccgat
      421 agcctcggga catattgaac ctttcttaaa aaaataatct tttgaagctt tttgaatggc
      481 acatcaggtc aggccaaagt ttaaaatgca agtttaagac tttgatggac agaagggctt
      541 ttttctcccc cctgtgtaaa gcttatcata gcttggcaat gtgtgcttta gtgcatgaca
      601 aaactaaaga gaattaactt agccatcaac tgctcaggga gaacaataac aggaaagaaa
      661 tttccagata gaagttccta ttaatctacc cagctat
//
